Query 015306
Match_columns 409
No_of_seqs 469 out of 3617
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:18:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015306.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015306hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 4E-62 1.4E-66 474.9 27.6 319 82-409 43-375 (376)
2 3q7e_A Protein arginine N-meth 100.0 4.2E-56 1.4E-60 433.0 31.5 325 81-409 25-349 (349)
3 1g6q_1 HnRNP arginine N-methyl 100.0 1.3E-55 4.4E-60 426.1 31.1 320 86-409 2-328 (328)
4 2fyt_A Protein arginine N-meth 100.0 4.5E-52 1.5E-56 403.0 33.4 314 84-409 26-340 (340)
5 3r0q_C Probable protein argini 100.0 3.8E-51 1.3E-55 401.8 31.6 313 82-399 23-364 (376)
6 4gqb_A Protein arginine N-meth 100.0 1.3E-44 4.5E-49 370.0 27.5 292 96-408 323-635 (637)
7 2y1w_A Histone-arginine methyl 100.0 3.1E-43 1.1E-47 342.3 32.3 306 84-398 12-327 (348)
8 3ua3_A Protein arginine N-meth 100.0 6.5E-43 2.2E-47 355.2 24.5 286 95-394 377-712 (745)
9 3b3j_A Histone-arginine methyl 100.0 1.1E-40 3.6E-45 336.1 31.8 305 85-398 121-435 (480)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 3.5E-16 1.2E-20 145.3 13.6 107 119-228 67-177 (261)
11 3kkz_A Uncharacterized protein 99.7 4E-16 1.4E-20 145.3 14.0 107 119-229 43-150 (267)
12 3f4k_A Putative methyltransfer 99.7 6.3E-16 2.2E-20 142.8 14.8 108 118-229 42-150 (257)
13 3g5l_A Putative S-adenosylmeth 99.7 5.7E-16 1.9E-20 142.9 13.7 110 112-228 34-144 (253)
14 3bus_A REBM, methyltransferase 99.7 1.1E-15 3.9E-20 142.4 15.4 117 109-228 48-165 (273)
15 3p9n_A Possible methyltransfer 99.7 5.9E-16 2E-20 136.5 12.7 105 121-228 43-152 (189)
16 1nkv_A Hypothetical protein YJ 99.7 8.1E-16 2.8E-20 142.0 13.8 115 110-228 24-139 (256)
17 3dlc_A Putative S-adenosyl-L-m 99.6 1E-15 3.5E-20 137.4 12.4 115 110-228 32-147 (219)
18 3hem_A Cyclopropane-fatty-acyl 99.6 3.4E-15 1.2E-19 141.6 16.4 115 110-228 60-182 (302)
19 3jwh_A HEN1; methyltransferase 99.6 1.7E-15 5.9E-20 136.4 13.2 107 120-227 27-139 (217)
20 1vl5_A Unknown conserved prote 99.6 1.4E-15 4.9E-20 140.9 12.9 105 119-228 34-139 (260)
21 2gb4_A Thiopurine S-methyltran 99.6 7.4E-16 2.5E-20 142.4 10.7 104 121-226 67-188 (252)
22 3mti_A RRNA methylase; SAM-dep 99.6 2.9E-15 1E-19 131.4 13.7 107 119-228 19-134 (185)
23 3ofk_A Nodulation protein S; N 99.6 1.2E-15 4E-20 137.3 11.3 114 109-227 38-152 (216)
24 1pjz_A Thiopurine S-methyltran 99.6 4.5E-16 1.5E-20 139.1 8.4 106 119-226 19-137 (203)
25 3vc1_A Geranyl diphosphate 2-C 99.6 3.5E-15 1.2E-19 142.3 15.0 112 112-227 106-219 (312)
26 3thr_A Glycine N-methyltransfe 99.6 1E-15 3.6E-20 144.3 10.9 124 104-228 39-174 (293)
27 1ri5_A MRNA capping enzyme; me 99.6 3E-15 1E-19 141.1 14.0 109 120-228 62-173 (298)
28 2o57_A Putative sarcosine dime 99.6 2.7E-15 9.4E-20 141.7 13.7 106 119-228 79-186 (297)
29 3jwg_A HEN1, methyltransferase 99.6 2.5E-15 8.5E-20 135.5 12.4 107 120-227 27-139 (219)
30 2esr_A Methyltransferase; stru 99.6 2.2E-15 7.4E-20 131.3 10.6 105 120-228 29-137 (177)
31 3lpm_A Putative methyltransfer 99.6 3.6E-15 1.2E-19 138.4 12.5 110 118-227 44-174 (259)
32 2ift_A Putative methylase HI07 99.6 1.7E-15 5.7E-20 135.2 9.8 103 122-228 53-162 (201)
33 1wzn_A SAM-dependent methyltra 99.6 1.7E-14 5.9E-19 132.8 16.5 113 112-228 31-144 (252)
34 3njr_A Precorrin-6Y methylase; 99.6 1.1E-14 3.8E-19 130.1 14.2 103 117-228 50-153 (204)
35 2pxx_A Uncharacterized protein 99.6 1.7E-15 5.7E-20 135.7 8.7 115 109-228 31-158 (215)
36 4htf_A S-adenosylmethionine-de 99.6 8E-15 2.7E-19 137.8 13.7 103 122-228 68-172 (285)
37 1xxl_A YCGJ protein; structura 99.6 5.5E-15 1.9E-19 135.3 12.2 106 118-228 17-123 (239)
38 2xvm_A Tellurite resistance pr 99.6 1.8E-14 6E-19 127.5 14.8 105 119-227 29-134 (199)
39 3mgg_A Methyltransferase; NYSG 99.6 8.1E-15 2.8E-19 136.9 13.3 116 109-228 24-141 (276)
40 1xtp_A LMAJ004091AAA; SGPP, st 99.6 8.6E-15 2.9E-19 134.8 13.1 115 110-228 81-196 (254)
41 1zx0_A Guanidinoacetate N-meth 99.6 4.3E-15 1.5E-19 135.7 11.0 108 120-229 58-170 (236)
42 3ocj_A Putative exported prote 99.6 3.5E-15 1.2E-19 141.8 10.7 120 107-229 105-227 (305)
43 1kpg_A CFA synthase;, cyclopro 99.6 2E-14 6.7E-19 135.2 15.7 115 109-228 51-167 (287)
44 3dh0_A SAM dependent methyltra 99.6 5.6E-15 1.9E-19 133.0 11.4 107 118-228 33-142 (219)
45 3eey_A Putative rRNA methylase 99.6 1.1E-14 3.8E-19 129.0 12.9 109 119-227 19-137 (197)
46 3orh_A Guanidinoacetate N-meth 99.6 3.8E-15 1.3E-19 136.3 10.2 106 121-228 59-169 (236)
47 3e05_A Precorrin-6Y C5,15-meth 99.6 1.9E-14 6.3E-19 128.4 14.4 109 113-228 31-141 (204)
48 3g5t_A Trans-aconitate 3-methy 99.6 1.6E-14 5.5E-19 136.7 14.5 113 110-227 25-147 (299)
49 1ve3_A Hypothetical protein PH 99.6 2.8E-14 9.7E-19 129.0 15.3 116 107-228 25-141 (227)
50 1y8c_A S-adenosylmethionine-de 99.6 7.8E-15 2.7E-19 134.2 11.7 103 121-227 36-140 (246)
51 3ujc_A Phosphoethanolamine N-m 99.6 6.9E-15 2.4E-19 136.2 11.3 115 110-228 43-158 (266)
52 4hg2_A Methyltransferase type 99.6 2.7E-15 9.3E-20 138.9 8.4 104 110-227 29-133 (257)
53 3dtn_A Putative methyltransfer 99.6 2E-14 6.8E-19 130.8 13.9 104 120-228 42-147 (234)
54 2fpo_A Methylase YHHF; structu 99.6 6.6E-15 2.3E-19 131.4 10.5 102 122-228 54-159 (202)
55 2a14_A Indolethylamine N-methy 99.6 1.2E-15 4.1E-20 142.0 5.8 110 119-228 52-196 (263)
56 2yqz_A Hypothetical protein TT 99.6 2.6E-14 8.9E-19 132.2 14.6 116 107-228 23-140 (263)
57 1xdz_A Methyltransferase GIDB; 99.6 4.9E-15 1.7E-19 135.8 9.5 99 121-227 69-172 (240)
58 3fpf_A Mtnas, putative unchara 99.6 3.2E-14 1.1E-18 133.0 15.0 102 118-228 118-221 (298)
59 3sm3_A SAM-dependent methyltra 99.6 1.7E-14 5.7E-19 131.0 12.6 108 120-228 28-140 (235)
60 2fhp_A Methylase, putative; al 99.6 8.4E-15 2.9E-19 128.4 10.2 105 120-228 42-153 (187)
61 3bkw_A MLL3908 protein, S-aden 99.6 1.2E-14 4E-19 132.9 11.5 108 114-228 35-143 (243)
62 2fk8_A Methoxy mycolic acid sy 99.6 4.4E-14 1.5E-18 134.8 16.0 115 109-228 77-193 (318)
63 2frn_A Hypothetical protein PH 99.6 6.3E-15 2.2E-19 138.2 9.7 101 120-228 123-224 (278)
64 3g07_A 7SK snRNA methylphospha 99.6 7.7E-15 2.6E-19 138.6 10.1 108 121-228 45-219 (292)
65 3m70_A Tellurite resistance pr 99.6 2.4E-14 8.3E-19 134.5 13.5 102 121-227 119-221 (286)
66 3g89_A Ribosomal RNA small sub 99.6 1.7E-14 5.8E-19 133.1 12.0 99 121-227 79-182 (249)
67 3d2l_A SAM-dependent methyltra 99.6 2.9E-14 9.9E-19 130.3 13.5 113 108-227 21-135 (243)
68 3l8d_A Methyltransferase; stru 99.6 8.1E-15 2.8E-19 134.0 9.6 101 120-228 51-152 (242)
69 3g2m_A PCZA361.24; SAM-depende 99.6 1.1E-14 3.7E-19 137.9 10.6 105 122-228 82-189 (299)
70 1dus_A MJ0882; hypothetical pr 99.6 5.4E-14 1.9E-18 123.5 14.2 111 114-228 44-156 (194)
71 3uwp_A Histone-lysine N-methyl 99.5 2.1E-14 7.2E-19 139.1 12.3 113 112-228 163-287 (438)
72 2vdw_A Vaccinia virus capping 99.5 1.4E-14 4.8E-19 137.4 10.9 107 122-228 48-168 (302)
73 3hm2_A Precorrin-6Y C5,15-meth 99.5 2E-14 6.7E-19 124.9 10.9 109 112-228 15-126 (178)
74 2p7i_A Hypothetical protein; p 99.5 1.2E-14 4E-19 133.1 10.0 99 120-228 40-140 (250)
75 2ex4_A Adrenal gland protein A 99.5 1.6E-14 5.4E-19 132.3 10.7 105 122-228 79-184 (241)
76 2p8j_A S-adenosylmethionine-de 99.5 2.4E-14 8.4E-19 127.8 11.3 105 120-228 21-127 (209)
77 3dr5_A Putative O-methyltransf 99.5 5E-14 1.7E-18 127.5 13.2 118 107-230 41-164 (221)
78 2ozv_A Hypothetical protein AT 99.5 1.8E-14 6E-19 133.8 10.3 109 118-227 32-168 (260)
79 2kw5_A SLR1183 protein; struct 99.5 5E-14 1.7E-18 125.2 12.2 101 121-228 29-130 (202)
80 3evz_A Methyltransferase; NYSG 99.5 6.2E-14 2.1E-18 127.2 12.8 107 119-227 52-177 (230)
81 3gu3_A Methyltransferase; alph 99.5 5.9E-14 2E-18 131.9 13.0 106 118-229 18-126 (284)
82 3lcc_A Putative methyl chlorid 99.5 2.8E-14 9.7E-19 130.0 10.5 103 122-227 66-169 (235)
83 3lec_A NADB-rossmann superfami 99.5 6.5E-14 2.2E-18 126.5 12.6 103 120-227 19-123 (230)
84 3pfg_A N-methyltransferase; N, 99.5 3.4E-14 1.2E-18 131.8 11.0 100 121-228 49-150 (263)
85 2gs9_A Hypothetical protein TT 99.5 4.8E-14 1.6E-18 126.2 11.5 95 122-228 36-131 (211)
86 3hnr_A Probable methyltransfer 99.5 2.9E-14 9.8E-19 128.5 9.4 98 121-228 44-144 (220)
87 3gnl_A Uncharacterized protein 99.5 8.7E-14 3E-18 126.7 12.6 103 120-227 19-123 (244)
88 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.9E-18 124.3 13.3 107 121-228 40-155 (214)
89 3grz_A L11 mtase, ribosomal pr 99.5 8.5E-14 2.9E-18 124.1 12.2 108 109-227 49-157 (205)
90 3kr9_A SAM-dependent methyltra 99.5 9.9E-14 3.4E-18 125.1 12.7 103 120-227 13-117 (225)
91 3ou2_A SAM-dependent methyltra 99.5 1.1E-13 3.7E-18 124.2 12.8 101 120-228 44-145 (218)
92 3k6r_A Putative transferase PH 99.5 3.3E-14 1.1E-18 132.5 9.6 99 120-226 123-222 (278)
93 3dxy_A TRNA (guanine-N(7)-)-me 99.5 6.6E-14 2.3E-18 126.5 11.3 105 122-228 34-149 (218)
94 2nxc_A L11 mtase, ribosomal pr 99.5 1.1E-13 3.6E-18 128.1 12.6 110 107-228 107-217 (254)
95 2igt_A SAM dependent methyltra 99.5 5.9E-14 2E-18 134.7 11.3 106 121-227 152-270 (332)
96 3fzg_A 16S rRNA methylase; met 99.5 3.7E-14 1.3E-18 123.2 8.8 111 108-226 37-149 (200)
97 3dmg_A Probable ribosomal RNA 99.5 1.4E-13 4.9E-18 134.4 14.0 119 106-227 215-338 (381)
98 1l3i_A Precorrin-6Y methyltran 99.5 1.3E-13 4.6E-18 120.8 12.5 109 112-228 23-133 (192)
99 3u81_A Catechol O-methyltransf 99.5 8.5E-14 2.9E-18 125.8 11.5 107 121-231 57-172 (221)
100 1jsx_A Glucose-inhibited divis 99.5 5.7E-14 1.9E-18 125.3 10.2 98 122-228 65-164 (207)
101 3e23_A Uncharacterized protein 99.5 1.1E-13 3.9E-18 123.8 11.8 99 120-228 41-140 (211)
102 4fsd_A Arsenic methyltransfera 99.5 8.3E-14 2.8E-18 136.6 11.8 106 120-228 81-202 (383)
103 3lbf_A Protein-L-isoaspartate 99.5 2.3E-13 8E-18 121.6 13.8 103 115-228 70-173 (210)
104 3h2b_A SAM-dependent methyltra 99.5 6.4E-14 2.2E-18 124.6 10.0 98 123-228 42-140 (203)
105 3ntv_A MW1564 protein; rossman 99.5 1E-13 3.5E-18 126.3 11.6 102 121-228 70-175 (232)
106 3tfw_A Putative O-methyltransf 99.5 1.4E-13 5E-18 126.7 12.6 103 121-229 62-170 (248)
107 3gdh_A Trimethylguanosine synt 99.5 5.4E-15 1.9E-19 135.4 2.9 103 121-228 77-180 (241)
108 2b3t_A Protein methyltransfera 99.5 2.6E-13 8.9E-18 126.9 14.3 123 103-228 91-237 (276)
109 3bgv_A MRNA CAP guanine-N7 met 99.5 1.8E-13 6.2E-18 130.3 13.4 108 121-228 33-154 (313)
110 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.6E-13 5.5E-18 123.4 12.3 107 121-228 37-152 (213)
111 3ege_A Putative methyltransfer 99.5 3.5E-14 1.2E-18 131.8 7.8 106 110-227 22-128 (261)
112 2p35_A Trans-aconitate 2-methy 99.5 1.4E-13 4.8E-18 127.0 11.8 105 114-228 25-131 (259)
113 1nv8_A HEMK protein; class I a 99.5 1.2E-13 4.1E-18 129.8 11.4 124 101-227 102-247 (284)
114 4dzr_A Protein-(glutamine-N5) 99.5 1.2E-14 4.2E-19 129.9 4.4 123 102-227 9-163 (215)
115 4dcm_A Ribosomal RNA large sub 99.5 2.1E-13 7.1E-18 133.1 13.3 113 114-227 214-332 (375)
116 3mb5_A SAM-dependent methyltra 99.5 1.6E-13 5.3E-18 126.7 11.9 106 113-227 84-192 (255)
117 2yxd_A Probable cobalt-precorr 99.5 2.4E-13 8.4E-18 118.2 12.5 104 113-228 26-130 (183)
118 3bxo_A N,N-dimethyltransferase 99.5 2.6E-13 9.1E-18 123.5 13.2 110 109-228 29-140 (239)
119 1nt2_A Fibrillarin-like PRE-rR 99.5 2.7E-13 9.2E-18 121.7 12.9 101 119-228 54-160 (210)
120 3iv6_A Putative Zn-dependent a 99.5 1.1E-13 3.7E-18 128.0 10.6 107 112-228 35-147 (261)
121 3dli_A Methyltransferase; PSI- 99.5 1.1E-13 3.9E-18 126.5 10.0 98 120-228 39-139 (240)
122 3ccf_A Cyclopropane-fatty-acyl 99.5 1.3E-13 4.3E-18 129.2 10.4 98 119-227 54-152 (279)
123 3bkx_A SAM-dependent methyltra 99.5 2.8E-13 9.6E-18 126.3 12.4 113 113-228 34-158 (275)
124 1fbn_A MJ fibrillarin homologu 99.5 3.1E-13 1.1E-17 122.9 12.4 101 118-227 70-176 (230)
125 2b78_A Hypothetical protein SM 99.5 2.5E-13 8.4E-18 133.2 12.5 109 121-229 211-331 (385)
126 1ws6_A Methyltransferase; stru 99.5 7.5E-14 2.6E-18 120.3 7.9 99 122-228 41-146 (171)
127 3bzb_A Uncharacterized protein 99.5 4.3E-13 1.5E-17 125.9 13.6 117 107-226 64-202 (281)
128 3duw_A OMT, O-methyltransferas 99.5 2.5E-13 8.5E-18 122.7 11.5 103 121-229 57-167 (223)
129 3i9f_A Putative type 11 methyl 99.5 6.8E-14 2.3E-18 120.8 7.4 96 120-228 15-111 (170)
130 2g72_A Phenylethanolamine N-me 99.5 1.4E-13 4.8E-18 129.6 10.1 108 121-228 70-214 (289)
131 3tr6_A O-methyltransferase; ce 99.5 1.8E-13 6.3E-18 123.7 10.2 103 121-229 63-174 (225)
132 3r3h_A O-methyltransferase, SA 99.5 6.4E-14 2.2E-18 128.6 7.0 104 121-230 59-171 (242)
133 1dl5_A Protein-L-isoaspartate 99.5 5E-13 1.7E-17 127.6 13.5 106 113-228 66-174 (317)
134 2i62_A Nicotinamide N-methyltr 99.4 6.8E-14 2.3E-18 129.5 6.9 110 119-228 53-197 (265)
135 2gpy_A O-methyltransferase; st 99.4 3.6E-13 1.2E-17 122.6 11.3 103 121-229 53-160 (233)
136 2ipx_A RRNA 2'-O-methyltransfe 99.4 7.3E-13 2.5E-17 120.6 13.0 102 118-227 73-180 (233)
137 3tma_A Methyltransferase; thum 99.4 6.3E-13 2.2E-17 128.9 13.3 117 109-227 190-315 (354)
138 2aot_A HMT, histamine N-methyl 99.4 4.6E-13 1.6E-17 126.3 12.0 105 121-228 51-171 (292)
139 1u2z_A Histone-lysine N-methyl 99.4 9E-13 3.1E-17 130.0 14.1 113 112-228 232-358 (433)
140 1o9g_A RRNA methyltransferase; 99.4 1.8E-13 6.2E-18 126.1 8.5 107 121-227 50-212 (250)
141 3c3p_A Methyltransferase; NP_9 99.4 3.6E-13 1.2E-17 120.6 10.1 102 121-229 55-160 (210)
142 2pwy_A TRNA (adenine-N(1)-)-me 99.4 7.3E-13 2.5E-17 122.2 12.4 106 113-227 87-196 (258)
143 3cgg_A SAM-dependent methyltra 99.4 7.1E-13 2.4E-17 116.3 11.8 100 120-227 44-145 (195)
144 1vbf_A 231AA long hypothetical 99.4 8.9E-13 3E-17 119.7 12.6 103 113-228 61-164 (231)
145 2avn_A Ubiquinone/menaquinone 99.4 5.3E-13 1.8E-17 123.6 11.2 97 122-228 54-151 (260)
146 3a27_A TYW2, uncharacterized p 99.4 4.9E-13 1.7E-17 124.9 11.0 100 119-227 116-217 (272)
147 2yxe_A Protein-L-isoaspartate 99.4 1.3E-12 4.3E-17 117.3 12.9 105 114-228 69-176 (215)
148 3c0k_A UPF0064 protein YCCW; P 99.4 6.9E-13 2.3E-17 130.6 12.1 109 121-229 219-339 (396)
149 1o54_A SAM-dependent O-methylt 99.4 6.4E-13 2.2E-17 124.3 11.2 106 114-228 104-212 (277)
150 4df3_A Fibrillarin-like rRNA/T 99.4 8.1E-13 2.8E-17 119.7 11.3 102 118-227 73-180 (233)
151 3e8s_A Putative SAM dependent 99.4 2.4E-13 8.2E-18 122.5 7.9 98 119-228 49-151 (227)
152 3v97_A Ribosomal RNA large sub 99.4 5.9E-13 2E-17 139.8 11.9 108 121-228 538-656 (703)
153 2as0_A Hypothetical protein PH 99.4 4.9E-13 1.7E-17 131.7 10.5 109 121-229 216-335 (396)
154 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.4E-13 2.5E-17 121.0 10.9 108 120-228 44-167 (235)
155 3m33_A Uncharacterized protein 99.4 2E-13 7E-18 123.8 6.9 90 121-226 47-139 (226)
156 3ajd_A Putative methyltransfer 99.4 8.4E-13 2.9E-17 123.4 10.9 112 119-231 80-213 (274)
157 1i9g_A Hypothetical protein RV 99.4 1.2E-12 4.2E-17 122.4 12.0 108 113-228 90-202 (280)
158 2yvl_A TRMI protein, hypotheti 99.4 1.3E-12 4.6E-17 119.6 12.0 105 114-227 83-188 (248)
159 1ixk_A Methyltransferase; open 99.4 1.2E-12 4.1E-17 124.8 11.9 113 118-231 114-248 (315)
160 2h00_A Methyltransferase 10 do 99.4 6E-13 2E-17 122.8 9.4 106 122-227 65-190 (254)
161 1yb2_A Hypothetical protein TA 99.4 7.3E-13 2.5E-17 123.8 10.1 106 113-228 101-210 (275)
162 1sui_A Caffeoyl-COA O-methyltr 99.4 6.3E-13 2.1E-17 122.4 9.4 103 121-229 78-190 (247)
163 3ggd_A SAM-dependent methyltra 99.4 8E-13 2.7E-17 121.1 10.0 103 119-227 53-161 (245)
164 1g8a_A Fibrillarin-like PRE-rR 99.4 2.2E-12 7.6E-17 116.8 12.5 101 119-227 70-176 (227)
165 3c3y_A Pfomt, O-methyltransfer 99.4 1.3E-12 4.4E-17 119.5 11.0 103 121-229 69-181 (237)
166 3mq2_A 16S rRNA methyltransfer 99.4 2.2E-13 7.4E-18 122.7 5.7 106 120-227 25-138 (218)
167 2hnk_A SAM-dependent O-methylt 99.4 9.5E-13 3.3E-17 120.4 10.0 102 121-228 59-180 (239)
168 2avd_A Catechol-O-methyltransf 99.4 8.5E-13 2.9E-17 119.6 9.4 103 121-229 68-179 (229)
169 3htx_A HEN1; HEN1, small RNA m 99.4 1.9E-12 6.4E-17 134.4 13.0 105 120-227 719-832 (950)
170 2qe6_A Uncharacterized protein 99.4 3.1E-12 1.1E-16 119.6 13.3 104 122-229 77-196 (274)
171 1wy7_A Hypothetical protein PH 99.4 7.4E-12 2.5E-16 111.5 14.9 100 119-226 46-146 (207)
172 3cbg_A O-methyltransferase; cy 99.4 2.2E-12 7.7E-17 117.5 11.2 103 121-229 71-182 (232)
173 3mcz_A O-methyltransferase; ad 99.4 5E-12 1.7E-16 122.3 14.1 111 114-227 170-285 (352)
174 1x19_A CRTF-related protein; m 99.4 7.4E-12 2.5E-16 121.5 15.2 110 114-227 182-293 (359)
175 2b25_A Hypothetical protein; s 99.4 2.4E-12 8.2E-17 123.9 11.7 101 118-226 101-216 (336)
176 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3E-12 1E-16 117.7 11.7 107 120-227 47-171 (246)
177 1i1n_A Protein-L-isoaspartate 99.4 4.9E-12 1.7E-16 114.4 13.0 100 120-228 75-181 (226)
178 2pjd_A Ribosomal RNA small sub 99.4 1.5E-12 5.3E-17 125.6 10.1 111 113-227 187-301 (343)
179 2r3s_A Uncharacterized protein 99.4 7.1E-12 2.4E-16 120.2 14.7 106 121-228 164-270 (335)
180 3dp7_A SAM-dependent methyltra 99.4 4.3E-12 1.5E-16 123.5 13.2 104 121-227 178-285 (363)
181 3id6_C Fibrillarin-like rRNA/T 99.4 9.5E-12 3.3E-16 112.9 14.5 103 118-228 72-180 (232)
182 1qzz_A RDMB, aclacinomycin-10- 99.4 7.6E-12 2.6E-16 122.0 14.9 111 115-229 175-287 (374)
183 2pbf_A Protein-L-isoaspartate 99.4 3.4E-12 1.2E-16 115.5 11.6 100 119-227 77-191 (227)
184 2yx1_A Hypothetical protein MJ 99.4 1.6E-12 5.3E-17 125.2 9.6 96 121-228 194-290 (336)
185 3cc8_A Putative methyltransfer 99.4 1.9E-12 6.6E-17 116.7 9.6 96 121-228 31-129 (230)
186 4dmg_A Putative uncharacterize 99.4 2.4E-12 8.4E-17 126.1 10.9 103 121-228 213-325 (393)
187 3gwz_A MMCR; methyltransferase 99.4 1.2E-11 4.2E-16 120.4 15.9 112 113-228 193-306 (369)
188 1jg1_A PIMT;, protein-L-isoasp 99.4 3.5E-12 1.2E-16 116.3 11.3 100 118-228 87-188 (235)
189 1xj5_A Spermidine synthase 1; 99.3 1.6E-12 5.6E-17 124.6 9.4 109 121-229 119-235 (334)
190 1mjf_A Spermidine synthase; sp 99.3 1.2E-12 4.2E-17 122.7 8.3 106 121-228 74-192 (281)
191 1inl_A Spermidine synthase; be 99.3 1.9E-12 6.6E-17 122.3 9.5 109 121-229 89-205 (296)
192 3i53_A O-methyltransferase; CO 99.3 7.9E-12 2.7E-16 120.0 13.9 105 120-228 167-273 (332)
193 3hp7_A Hemolysin, putative; st 99.3 1.1E-12 3.7E-17 122.8 7.6 107 109-227 72-183 (291)
194 1wxx_A TT1595, hypothetical pr 99.3 1.9E-12 6.3E-17 126.9 9.6 106 122-229 209-325 (382)
195 3q87_B N6 adenine specific DNA 99.3 2.2E-12 7.5E-17 111.7 9.0 108 104-227 7-121 (170)
196 3p2e_A 16S rRNA methylase; met 99.3 1.2E-12 4E-17 118.8 7.4 106 121-227 23-137 (225)
197 3bwc_A Spermidine synthase; SA 99.3 4E-12 1.4E-16 120.6 11.4 107 121-228 94-209 (304)
198 3tm4_A TRNA (guanine N2-)-meth 99.3 5.1E-12 1.7E-16 123.3 12.0 109 110-219 206-321 (373)
199 2pt6_A Spermidine synthase; tr 99.3 1.8E-12 6.1E-17 123.9 8.4 108 121-228 115-229 (321)
200 1vlm_A SAM-dependent methyltra 99.3 3.8E-12 1.3E-16 114.6 10.1 91 122-228 47-138 (219)
201 1iy9_A Spermidine synthase; ro 99.3 2.8E-12 9.5E-17 119.9 9.5 109 121-229 74-189 (275)
202 1af7_A Chemotaxis receptor met 99.3 7.7E-12 2.6E-16 116.5 11.9 106 122-228 105-251 (274)
203 2b2c_A Spermidine synthase; be 99.3 1.5E-12 5E-17 123.9 7.0 109 121-229 107-222 (314)
204 1tw3_A COMT, carminomycin 4-O- 99.3 2E-11 6.8E-16 118.5 15.0 107 118-228 179-287 (360)
205 4e2x_A TCAB9; kijanose, tetron 99.3 1.1E-12 3.6E-17 130.1 6.1 113 108-228 93-207 (416)
206 2o07_A Spermidine synthase; st 99.3 4.8E-12 1.7E-16 119.9 10.2 108 121-228 94-208 (304)
207 1uir_A Polyamine aminopropyltr 99.3 3.9E-12 1.3E-16 121.2 9.4 108 121-228 76-194 (314)
208 3gjy_A Spermidine synthase; AP 99.3 4.1E-12 1.4E-16 120.2 9.4 104 124-228 91-199 (317)
209 2ip2_A Probable phenazine-spec 99.3 1E-11 3.4E-16 119.3 12.2 106 118-228 164-271 (334)
210 3m6w_A RRNA methylase; rRNA me 99.3 3.8E-12 1.3E-16 126.7 9.4 111 119-231 98-231 (464)
211 2qm3_A Predicted methyltransfe 99.3 1.2E-11 4E-16 120.8 12.5 100 120-225 170-273 (373)
212 3adn_A Spermidine synthase; am 99.3 4.7E-12 1.6E-16 119.3 9.3 107 121-228 82-197 (294)
213 1zq9_A Probable dimethyladenos 99.3 8.4E-12 2.9E-16 117.3 11.0 85 111-198 17-102 (285)
214 2bm8_A Cephalosporin hydroxyla 99.3 2.3E-12 7.8E-17 117.8 6.5 97 122-230 81-188 (236)
215 1r18_A Protein-L-isoaspartate( 99.3 1E-11 3.6E-16 112.4 10.7 99 119-227 81-192 (227)
216 1ne2_A Hypothetical protein TA 99.3 1.5E-11 5.2E-16 109.0 11.3 90 120-219 49-139 (200)
217 4azs_A Methyltransferase WBDD; 99.3 4.7E-12 1.6E-16 130.3 8.9 99 121-224 65-168 (569)
218 3m4x_A NOL1/NOP2/SUN family pr 99.3 7.8E-12 2.7E-16 124.3 9.6 113 119-232 102-237 (456)
219 2i7c_A Spermidine synthase; tr 99.3 1.5E-11 5.1E-16 115.4 10.8 108 121-229 77-192 (283)
220 1ej0_A FTSJ; methyltransferase 99.3 1E-11 3.4E-16 107.0 8.8 103 114-227 14-134 (180)
221 2frx_A Hypothetical protein YE 99.3 1.8E-11 6.1E-16 122.9 11.6 109 122-231 117-248 (479)
222 2yxl_A PH0851 protein, 450AA l 99.3 2.5E-11 8.7E-16 121.3 12.8 113 118-231 255-391 (450)
223 2plw_A Ribosomal RNA methyltra 99.3 1.2E-11 4E-16 109.6 9.2 99 118-227 18-152 (201)
224 3opn_A Putative hemolysin; str 99.3 2E-12 6.8E-17 117.8 3.8 106 110-227 25-135 (232)
225 1p91_A Ribosomal RNA large sub 99.2 1.8E-11 6.1E-16 113.7 10.0 91 121-227 84-176 (269)
226 3dou_A Ribosomal RNA large sub 99.2 2.2E-11 7.5E-16 107.5 9.7 103 112-226 15-136 (191)
227 3ldu_A Putative methylase; str 99.2 2.6E-11 8.8E-16 118.6 11.1 117 108-226 181-341 (385)
228 3ldg_A Putative uncharacterize 99.2 5.5E-11 1.9E-15 116.0 12.9 118 108-226 180-340 (384)
229 3frh_A 16S rRNA methylase; met 99.2 5.5E-11 1.9E-15 107.0 11.5 99 121-226 104-203 (253)
230 2jjq_A Uncharacterized RNA met 99.2 7.2E-11 2.5E-15 116.9 13.4 98 120-228 288-386 (425)
231 3k0b_A Predicted N6-adenine-sp 99.2 3.4E-11 1.2E-15 118.0 10.8 117 108-226 187-347 (393)
232 2nyu_A Putative ribosomal RNA 99.2 3.3E-11 1.1E-15 106.2 9.7 98 118-227 18-143 (196)
233 2h1r_A Dimethyladenosine trans 99.2 3.8E-11 1.3E-15 113.5 10.8 81 114-198 34-115 (299)
234 1sqg_A SUN protein, FMU protei 99.2 4.3E-11 1.5E-15 119.0 11.4 111 119-231 243-376 (429)
235 3sso_A Methyltransferase; macr 99.2 2.7E-11 9.2E-16 117.2 9.4 105 109-229 205-324 (419)
236 1uwv_A 23S rRNA (uracil-5-)-me 99.2 1E-10 3.4E-15 116.4 13.5 112 107-227 271-387 (433)
237 3axs_A Probable N(2),N(2)-dime 99.2 2.4E-11 8.3E-16 118.5 8.6 101 121-228 51-157 (392)
238 3lcv_B Sisomicin-gentamicin re 99.2 3E-11 1E-15 109.7 8.3 101 121-226 131-233 (281)
239 2wa2_A Non-structural protein 99.2 4.3E-12 1.5E-16 118.5 2.9 105 118-227 78-191 (276)
240 2oxt_A Nucleoside-2'-O-methylt 99.2 4.3E-12 1.5E-16 117.8 2.0 105 118-227 70-183 (265)
241 3giw_A Protein of unknown func 99.2 6.4E-11 2.2E-15 109.4 9.8 121 107-228 62-199 (277)
242 3lst_A CALO1 methyltransferase 99.2 3.5E-11 1.2E-15 116.3 8.4 109 114-228 176-285 (348)
243 2cmg_A Spermidine synthase; tr 99.2 2.3E-11 7.9E-16 112.7 5.5 96 121-228 71-170 (262)
244 2dul_A N(2),N(2)-dimethylguano 99.1 6.8E-11 2.3E-15 115.2 8.2 98 122-227 47-162 (378)
245 2zfu_A Nucleomethylin, cerebra 99.1 7.8E-11 2.7E-15 105.5 7.4 86 120-228 65-150 (215)
246 2p41_A Type II methyltransfera 99.1 5.1E-11 1.8E-15 112.8 6.4 103 118-227 78-189 (305)
247 2qfm_A Spermine synthase; sper 99.1 1E-10 3.4E-15 112.0 8.3 121 109-229 174-314 (364)
248 3gru_A Dimethyladenosine trans 99.1 3E-10 1E-14 106.7 11.3 85 110-198 38-123 (295)
249 1qam_A ERMC' methyltransferase 99.1 5.3E-10 1.8E-14 102.5 12.6 84 110-198 18-103 (244)
250 2f8l_A Hypothetical protein LM 99.1 2.6E-10 8.9E-15 110.0 10.8 104 121-227 129-254 (344)
251 2b9e_A NOL1/NOP2/SUN domain fa 99.1 6.9E-10 2.3E-14 105.2 13.4 111 119-231 99-236 (309)
252 3bt7_A TRNA (uracil-5-)-methyl 99.1 2E-10 6.7E-15 111.9 9.8 108 108-227 200-324 (369)
253 3reo_A (ISO)eugenol O-methyltr 99.1 4.8E-10 1.6E-14 109.1 11.9 97 120-228 201-299 (368)
254 2ih2_A Modification methylase 99.1 3.6E-10 1.2E-14 111.8 10.2 99 118-227 35-162 (421)
255 1fp1_D Isoliquiritigenin 2'-O- 99.1 4.6E-10 1.6E-14 109.4 10.6 97 120-228 207-305 (372)
256 3p9c_A Caffeic acid O-methyltr 99.1 6E-10 2E-14 108.3 11.4 97 120-228 199-297 (364)
257 1yub_A Ermam, rRNA methyltrans 99.1 1.5E-11 5.1E-16 112.9 -0.3 106 115-227 22-143 (245)
258 3fut_A Dimethyladenosine trans 99.0 7.8E-10 2.7E-14 102.7 10.5 94 113-214 38-133 (271)
259 4a6d_A Hydroxyindole O-methylt 99.0 1.7E-09 5.9E-14 104.6 13.1 112 113-228 170-282 (353)
260 3tqs_A Ribosomal RNA small sub 99.0 6.8E-10 2.3E-14 102.3 9.3 82 112-198 19-105 (255)
261 2okc_A Type I restriction enzy 99.0 4.9E-10 1.7E-14 111.8 8.7 115 111-226 160-304 (445)
262 2ld4_A Anamorsin; methyltransf 99.0 1.9E-10 6.6E-15 99.6 4.3 88 118-227 8-99 (176)
263 1fp2_A Isoflavone O-methyltran 99.0 1E-09 3.4E-14 106.1 9.1 97 120-228 186-287 (352)
264 3v97_A Ribosomal RNA large sub 98.9 3.2E-09 1.1E-13 111.4 12.1 118 108-226 176-344 (703)
265 2xyq_A Putative 2'-O-methyl tr 98.9 1.9E-09 6.5E-14 100.9 9.1 95 117-227 58-169 (290)
266 3cvo_A Methyltransferase-like 98.9 1.4E-08 4.8E-13 89.6 12.9 98 122-229 30-154 (202)
267 2r6z_A UPF0341 protein in RSP 98.9 8.9E-10 3E-14 101.7 3.8 79 120-199 81-171 (258)
268 3ll7_A Putative methyltransfer 98.9 2.8E-09 9.5E-14 104.2 7.4 75 122-198 93-172 (410)
269 1m6y_A S-adenosyl-methyltransf 98.9 3.4E-09 1.2E-13 99.9 7.5 77 119-197 23-106 (301)
270 1zg3_A Isoflavanone 4'-O-methy 98.8 5.1E-09 1.7E-13 101.4 8.7 97 121-228 192-292 (358)
271 3uzu_A Ribosomal RNA small sub 98.8 7.6E-09 2.6E-13 96.5 8.8 81 113-198 33-123 (279)
272 3ftd_A Dimethyladenosine trans 98.8 6.3E-09 2.2E-13 95.5 7.3 84 110-198 19-104 (249)
273 2oyr_A UPF0341 protein YHIQ; a 98.8 7.4E-09 2.5E-13 95.3 6.8 80 118-199 82-174 (258)
274 2ar0_A M.ecoki, type I restric 98.7 1.7E-08 5.8E-13 102.9 8.6 113 114-226 161-309 (541)
275 1qyr_A KSGA, high level kasuga 98.7 7.6E-09 2.6E-13 95.1 5.4 80 113-198 12-99 (252)
276 3o4f_A Spermidine synthase; am 98.7 2.7E-08 9.1E-13 92.7 8.8 108 121-228 82-197 (294)
277 3lkd_A Type I restriction-modi 98.6 3.2E-07 1.1E-11 93.3 13.0 106 120-226 219-355 (542)
278 3khk_A Type I restriction-modi 98.6 5.6E-08 1.9E-12 98.9 7.3 102 125-226 247-392 (544)
279 3evf_A RNA-directed RNA polyme 98.6 9.5E-08 3.3E-12 87.3 7.8 114 110-227 63-182 (277)
280 4fzv_A Putative methyltransfer 98.5 2.3E-07 7.8E-12 89.3 9.2 115 118-232 144-287 (359)
281 2wk1_A NOVP; transferase, O-me 98.5 1.1E-06 3.9E-11 81.5 13.0 119 107-230 91-245 (282)
282 4auk_A Ribosomal RNA large sub 98.4 7E-07 2.4E-11 85.4 10.4 71 120-198 209-279 (375)
283 3c6k_A Spermine synthase; sper 98.4 2.9E-07 9.9E-12 88.4 7.7 120 109-228 191-330 (381)
284 3gcz_A Polyprotein; flavivirus 98.4 7.3E-08 2.5E-12 88.2 2.9 114 110-227 79-199 (282)
285 3s1s_A Restriction endonucleas 98.4 1.3E-06 4.6E-11 90.8 11.2 105 121-226 320-462 (878)
286 2qy6_A UPF0209 protein YFCK; s 98.3 9.2E-07 3.2E-11 81.3 8.2 107 121-227 59-211 (257)
287 2k4m_A TR8_protein, UPF0146 pr 98.3 6.2E-07 2.1E-11 73.9 5.8 68 109-195 24-95 (153)
288 3p8z_A Mtase, non-structural p 98.3 4.3E-06 1.5E-10 74.1 11.3 111 110-226 67-183 (267)
289 3eld_A Methyltransferase; flav 98.2 5.6E-07 1.9E-11 82.9 4.4 114 110-227 70-189 (300)
290 3lkz_A Non-structural protein 98.2 7.2E-06 2.4E-10 75.1 9.9 112 110-226 83-201 (321)
291 2px2_A Genome polyprotein [con 98.2 3E-06 1E-10 76.3 7.1 100 118-226 69-180 (269)
292 1wg8_A Predicted S-adenosylmet 98.1 4.8E-06 1.7E-10 76.6 8.2 74 118-197 18-97 (285)
293 3b5i_A S-adenosyl-L-methionine 98.1 3.3E-05 1.1E-09 74.5 13.6 106 123-228 53-224 (374)
294 2efj_A 3,7-dimethylxanthine me 97.9 4.1E-05 1.4E-09 74.0 9.1 102 123-227 53-223 (384)
295 3ufb_A Type I restriction-modi 97.8 5.9E-05 2E-09 76.5 10.5 86 112-198 207-311 (530)
296 2zig_A TTHA0409, putative modi 97.8 4.9E-05 1.7E-09 71.3 8.5 46 121-167 234-280 (297)
297 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00036 1.2E-08 63.9 10.4 102 109-226 95-214 (344)
298 1m6e_X S-adenosyl-L-methionnin 97.5 5.7E-05 1.9E-09 72.4 4.5 106 122-227 51-207 (359)
299 2oo3_A Protein involved in cat 97.5 5.6E-05 1.9E-09 69.5 3.7 109 107-226 80-195 (283)
300 1i4w_A Mitochondrial replicati 97.4 0.00037 1.3E-08 66.7 8.0 81 100-184 34-118 (353)
301 1g60_A Adenine-specific methyl 97.3 0.00037 1.3E-08 63.9 7.0 49 120-169 210-259 (260)
302 3g7u_A Cytosine-specific methy 97.2 0.0011 3.8E-08 64.1 8.8 69 124-198 3-80 (376)
303 3tka_A Ribosomal RNA small sub 97.1 0.0011 3.7E-08 62.4 7.6 75 118-197 53-136 (347)
304 1rjd_A PPM1P, carboxy methyl t 97.0 0.0049 1.7E-07 58.5 11.8 120 105-226 80-229 (334)
305 1g55_A DNA cytosine methyltran 96.8 0.00049 1.7E-08 65.8 3.1 69 124-198 3-77 (343)
306 2c7p_A Modification methylase 96.8 0.0023 7.8E-08 60.7 7.5 69 122-198 10-80 (327)
307 1f8f_A Benzyl alcohol dehydrog 96.5 0.0088 3E-07 57.5 9.5 98 114-227 182-287 (371)
308 2py6_A Methyltransferase FKBM; 96.4 0.0085 2.9E-07 58.5 8.5 63 120-182 224-293 (409)
309 2uyo_A Hypothetical protein ML 96.2 0.048 1.6E-06 51.1 12.4 121 105-229 86-218 (310)
310 2dph_A Formaldehyde dismutase; 96.1 0.01 3.5E-07 57.7 7.2 101 118-227 181-297 (398)
311 3qv2_A 5-cytosine DNA methyltr 96.0 0.009 3.1E-07 56.5 6.3 69 123-198 10-85 (327)
312 3ip1_A Alcohol dehydrogenase, 95.9 0.034 1.1E-06 54.1 10.3 98 119-228 210-317 (404)
313 4ej6_A Putative zinc-binding d 95.8 0.01 3.4E-07 57.2 5.9 97 118-227 178-282 (370)
314 3vyw_A MNMC2; tRNA wobble urid 95.8 0.036 1.2E-06 51.6 9.3 106 122-227 96-224 (308)
315 2qrv_A DNA (cytosine-5)-methyl 95.8 0.018 6.2E-07 53.5 7.2 71 121-197 14-91 (295)
316 3ubt_Y Modification methylase 95.7 0.011 3.8E-07 55.8 5.6 68 124-198 1-70 (331)
317 4h0n_A DNMT2; SAH binding, tra 95.7 0.0075 2.6E-07 57.2 4.3 69 124-198 4-78 (333)
318 3fpc_A NADP-dependent alcohol 95.6 0.021 7.1E-07 54.4 7.1 95 117-227 161-264 (352)
319 1pl8_A Human sorbitol dehydrog 95.5 0.033 1.1E-06 53.1 8.3 94 118-227 167-271 (356)
320 2vz8_A Fatty acid synthase; tr 95.5 0.0031 1E-07 74.9 0.9 101 121-228 1239-1347(2512)
321 3m6i_A L-arabinitol 4-dehydrog 95.4 0.028 9.4E-07 53.8 7.2 97 117-227 174-281 (363)
322 3tos_A CALS11; methyltransfera 95.4 0.093 3.2E-06 47.6 10.2 103 123-230 70-218 (257)
323 1boo_A Protein (N-4 cytosine-s 95.4 0.0032 1.1E-07 59.6 0.5 61 120-183 250-311 (323)
324 3uog_A Alcohol dehydrogenase; 95.3 0.033 1.1E-06 53.3 7.6 97 113-227 180-285 (363)
325 3s2e_A Zinc-containing alcohol 95.3 0.024 8.3E-07 53.6 6.5 95 117-228 161-262 (340)
326 1kol_A Formaldehyde dehydrogen 95.3 0.03 1E-06 54.3 7.2 101 118-227 181-298 (398)
327 1pqw_A Polyketide synthase; ro 95.3 0.024 8.3E-07 49.0 5.8 96 114-227 30-135 (198)
328 3uko_A Alcohol dehydrogenase c 95.2 0.019 6.6E-07 55.2 5.4 98 114-227 185-293 (378)
329 1p0f_A NADP-dependent alcohol 95.2 0.039 1.3E-06 52.9 7.5 96 116-227 185-291 (373)
330 3goh_A Alcohol dehydrogenase, 95.2 0.038 1.3E-06 51.6 7.3 89 116-227 136-227 (315)
331 3two_A Mannitol dehydrogenase; 95.1 0.056 1.9E-06 51.3 8.3 89 118-227 172-263 (348)
332 1cdo_A Alcohol dehydrogenase; 95.1 0.038 1.3E-06 53.0 7.1 96 116-227 186-292 (374)
333 2fzw_A Alcohol dehydrogenase c 95.0 0.046 1.6E-06 52.4 7.6 96 116-227 184-290 (373)
334 1e3i_A Alcohol dehydrogenase, 94.9 0.043 1.5E-06 52.7 7.1 96 116-227 189-295 (376)
335 4dvj_A Putative zinc-dependent 94.9 0.047 1.6E-06 52.3 7.2 91 122-228 171-269 (363)
336 2jhf_A Alcohol dehydrogenase E 94.9 0.053 1.8E-06 52.0 7.5 96 116-227 185-291 (374)
337 3jv7_A ADH-A; dehydrogenase, n 94.8 0.04 1.4E-06 52.2 6.4 94 119-228 168-269 (345)
338 3gms_A Putative NADPH:quinone 94.8 0.038 1.3E-06 52.3 6.2 96 114-227 136-241 (340)
339 3me5_A Cytosine-specific methy 94.6 0.06 2.1E-06 53.5 7.1 73 123-198 88-178 (482)
340 1e3j_A NADP(H)-dependent ketos 94.5 0.053 1.8E-06 51.5 6.4 93 118-227 164-269 (352)
341 1v3u_A Leukotriene B4 12- hydr 94.5 0.062 2.1E-06 50.6 6.7 97 114-227 137-242 (333)
342 1uuf_A YAHK, zinc-type alcohol 94.3 0.042 1.4E-06 52.7 5.3 92 118-227 190-286 (369)
343 4a2c_A Galactitol-1-phosphate 94.3 0.081 2.8E-06 50.0 7.1 97 118-227 156-258 (346)
344 2d8a_A PH0655, probable L-thre 94.2 0.15 5.1E-06 48.3 8.9 94 117-227 163-265 (348)
345 4b7c_A Probable oxidoreductase 94.2 0.047 1.6E-06 51.5 5.4 98 113-227 140-246 (336)
346 1vj0_A Alcohol dehydrogenase, 94.2 0.092 3.1E-06 50.5 7.5 94 118-227 190-296 (380)
347 3fbg_A Putative arginate lyase 94.1 0.075 2.6E-06 50.4 6.5 89 122-227 150-246 (346)
348 3pvc_A TRNA 5-methylaminomethy 94.1 0.08 2.7E-06 55.3 7.2 107 122-228 58-210 (689)
349 2eih_A Alcohol dehydrogenase; 94.0 0.067 2.3E-06 50.6 6.0 92 118-227 162-263 (343)
350 3jyn_A Quinone oxidoreductase; 93.9 0.14 4.8E-06 48.0 8.0 97 114-228 132-238 (325)
351 2h6e_A ADH-4, D-arabinose 1-de 93.9 0.035 1.2E-06 52.6 3.7 90 119-227 168-267 (344)
352 2c0c_A Zinc binding alcohol de 93.7 0.1 3.5E-06 49.8 6.7 92 118-227 159-259 (362)
353 3qwb_A Probable quinone oxidor 93.7 0.14 4.9E-06 48.1 7.7 94 116-227 142-245 (334)
354 4eye_A Probable oxidoreductase 93.7 0.11 3.6E-06 49.3 6.7 96 113-227 150-255 (342)
355 2dq4_A L-threonine 3-dehydroge 93.5 0.016 5.3E-07 55.1 0.4 93 117-227 160-260 (343)
356 2j3h_A NADP-dependent oxidored 93.5 0.084 2.9E-06 49.9 5.5 97 114-227 147-253 (345)
357 1iz0_A Quinone oxidoreductase; 93.4 0.044 1.5E-06 50.8 3.5 89 120-227 123-216 (302)
358 2zig_A TTHA0409, putative modi 93.4 0.066 2.2E-06 49.7 4.6 59 171-230 20-98 (297)
359 1yb5_A Quinone oxidoreductase; 93.3 0.13 4.4E-06 48.9 6.6 97 114-228 162-268 (351)
360 1piw_A Hypothetical zinc-type 93.2 0.14 4.8E-06 48.8 6.8 94 118-227 175-274 (360)
361 4eez_A Alcohol dehydrogenase 1 93.2 0.26 8.9E-06 46.4 8.6 98 118-228 159-262 (348)
362 2hcy_A Alcohol dehydrogenase 1 93.1 0.1 3.5E-06 49.4 5.5 93 118-227 165-267 (347)
363 1rjw_A ADH-HT, alcohol dehydro 93.1 0.094 3.2E-06 49.5 5.2 91 119-227 161-259 (339)
364 1qor_A Quinone oxidoreductase; 93.1 0.085 2.9E-06 49.5 4.9 93 117-227 135-237 (327)
365 1wly_A CAAR, 2-haloacrylate re 92.6 0.17 5.9E-06 47.5 6.3 93 117-227 140-242 (333)
366 3tqh_A Quinone oxidoreductase; 92.2 0.38 1.3E-05 44.8 8.2 94 116-227 146-243 (321)
367 2zb4_A Prostaglandin reductase 92.1 0.15 5.2E-06 48.4 5.3 96 116-227 152-258 (357)
368 4dcm_A Ribosomal RNA large sub 92.1 0.57 2E-05 44.9 9.3 94 122-226 38-133 (375)
369 3fwz_A Inner membrane protein 92.1 0.63 2.2E-05 37.5 8.3 89 123-226 7-102 (140)
370 3ps9_A TRNA 5-methylaminomethy 92.0 0.51 1.7E-05 49.0 9.5 107 122-228 66-218 (676)
371 3iei_A Leucine carboxyl methyl 91.9 2.5 8.4E-05 39.8 13.3 120 105-226 72-226 (334)
372 1jvb_A NAD(H)-dependent alcoho 91.9 0.4 1.4E-05 45.2 7.9 93 118-227 166-269 (347)
373 1boo_A Protein (N-4 cytosine-s 91.8 0.18 6E-06 47.5 5.2 59 171-230 13-85 (323)
374 4ft4_B DNA (cytosine-5)-methyl 91.6 0.37 1.3E-05 51.0 8.1 42 123-164 212-260 (784)
375 3nx4_A Putative oxidoreductase 91.5 0.18 6E-06 47.2 4.9 87 123-227 148-239 (324)
376 3swr_A DNA (cytosine-5)-methyl 91.4 0.2 6.9E-06 54.1 5.7 70 123-198 540-627 (1002)
377 4dup_A Quinone oxidoreductase; 91.4 0.17 5.7E-06 48.1 4.6 96 114-227 159-263 (353)
378 3krt_A Crotonyl COA reductase; 91.2 0.62 2.1E-05 45.8 8.8 92 118-227 224-342 (456)
379 1eg2_A Modification methylase 91.0 0.26 8.9E-06 46.2 5.6 47 120-167 240-290 (319)
380 3oig_A Enoyl-[acyl-carrier-pro 90.9 1.9 6.4E-05 38.6 11.2 75 121-197 5-95 (266)
381 1zsy_A Mitochondrial 2-enoyl t 90.8 0.34 1.2E-05 46.0 6.3 101 113-227 158-268 (357)
382 3gaz_A Alcohol dehydrogenase s 90.8 0.83 2.8E-05 43.0 9.0 93 114-227 142-244 (343)
383 3pxx_A Carveol dehydrogenase; 90.8 2.2 7.4E-05 38.6 11.6 104 121-227 8-151 (287)
384 2vn8_A Reticulon-4-interacting 90.4 0.22 7.6E-06 47.6 4.5 91 120-227 181-278 (375)
385 4eso_A Putative oxidoreductase 90.2 1.3 4.6E-05 39.6 9.4 71 121-197 6-90 (255)
386 1gu7_A Enoyl-[acyl-carrier-pro 90.0 0.47 1.6E-05 45.0 6.4 100 114-227 158-273 (364)
387 4fgs_A Probable dehydrogenase 89.8 1.6 5.5E-05 39.8 9.6 72 120-197 26-111 (273)
388 3grk_A Enoyl-(acyl-carrier-pro 89.7 3.9 0.00013 37.3 12.4 73 121-197 29-117 (293)
389 3ggo_A Prephenate dehydrogenas 89.4 1.4 4.9E-05 40.9 9.2 87 124-226 34-125 (314)
390 1eg2_A Modification methylase 89.3 0.35 1.2E-05 45.3 4.8 57 171-228 37-105 (319)
391 2j8z_A Quinone oxidoreductase; 89.3 0.42 1.4E-05 45.3 5.5 94 116-227 156-259 (354)
392 1zkd_A DUF185; NESG, RPR58, st 89.2 1.7 5.8E-05 41.7 9.6 70 122-198 80-158 (387)
393 3ijr_A Oxidoreductase, short c 89.2 2.6 9E-05 38.4 10.7 104 121-227 45-180 (291)
394 3ioy_A Short-chain dehydrogena 89.2 1.4 4.6E-05 41.0 8.9 76 121-197 6-95 (319)
395 3ado_A Lambda-crystallin; L-gu 89.0 1.1 3.8E-05 41.9 8.0 101 123-232 6-126 (319)
396 2cf5_A Atccad5, CAD, cinnamyl 88.8 0.47 1.6E-05 45.0 5.5 93 118-227 175-273 (357)
397 3h7a_A Short chain dehydrogena 88.8 1.2 4E-05 39.9 7.8 74 121-197 5-91 (252)
398 1yqd_A Sinapyl alcohol dehydro 88.6 0.46 1.6E-05 45.3 5.2 93 119-227 183-280 (366)
399 2b5w_A Glucose dehydrogenase; 88.5 0.54 1.9E-05 44.5 5.7 91 119-227 163-271 (357)
400 1pjc_A Protein (L-alanine dehy 88.3 0.26 9E-06 47.0 3.2 97 122-227 166-265 (361)
401 3v2g_A 3-oxoacyl-[acyl-carrier 88.2 2.9 0.0001 37.7 10.3 74 121-197 29-117 (271)
402 3ek2_A Enoyl-(acyl-carrier-pro 88.1 3 0.0001 37.2 10.2 75 119-197 10-100 (271)
403 4g81_D Putative hexonate dehyd 88.0 0.91 3.1E-05 41.0 6.5 74 121-197 7-94 (255)
404 3k31_A Enoyl-(acyl-carrier-pro 87.9 2.5 8.6E-05 38.7 9.7 73 121-197 28-116 (296)
405 4fn4_A Short chain dehydrogena 87.8 1.8 6.3E-05 38.9 8.5 74 121-197 5-92 (254)
406 1xa0_A Putative NADPH dependen 87.8 0.31 1.1E-05 45.5 3.4 94 119-227 145-244 (328)
407 3r3s_A Oxidoreductase; structu 87.7 3.5 0.00012 37.6 10.6 104 121-227 47-183 (294)
408 3av4_A DNA (cytosine-5)-methyl 87.5 1.6 5.3E-05 48.6 9.1 71 122-198 850-938 (1330)
409 1zcj_A Peroxisomal bifunctiona 87.3 3.6 0.00012 40.4 11.0 96 124-229 38-150 (463)
410 3is3_A 17BETA-hydroxysteroid d 87.1 2.3 8E-05 38.2 8.9 104 121-227 16-150 (270)
411 2dpo_A L-gulonate 3-dehydrogen 87.1 4.7 0.00016 37.5 11.1 96 124-228 7-122 (319)
412 3edm_A Short chain dehydrogena 87.1 1.8 6.1E-05 38.8 8.0 74 121-197 6-94 (259)
413 3ius_A Uncharacterized conserv 87.1 4.8 0.00016 36.1 11.0 80 124-217 6-90 (286)
414 1tt7_A YHFP; alcohol dehydroge 86.9 0.36 1.2E-05 45.1 3.3 91 119-227 146-245 (330)
415 3llv_A Exopolyphosphatase-rela 86.9 2.5 8.6E-05 33.7 8.1 65 123-196 6-77 (141)
416 3c85_A Putative glutathione-re 86.9 2.2 7.4E-05 35.9 8.0 90 122-226 38-136 (183)
417 1g60_A Adenine-specific methyl 86.6 0.59 2E-05 42.2 4.4 55 173-228 5-73 (260)
418 3jyo_A Quinate/shikimate dehyd 86.5 0.87 3E-05 41.8 5.5 86 108-196 112-201 (283)
419 1wma_A Carbonyl reductase [NAD 86.3 1.8 6.1E-05 38.6 7.6 73 122-197 3-90 (276)
420 3lyl_A 3-oxoacyl-(acyl-carrier 86.2 2.4 8.2E-05 37.4 8.3 73 122-197 4-90 (247)
421 2vhw_A Alanine dehydrogenase; 86.2 0.3 1E-05 46.9 2.3 98 121-227 166-266 (377)
422 4f3n_A Uncharacterized ACR, CO 86.0 1.8 6.2E-05 42.1 7.7 69 123-198 138-216 (432)
423 3t4x_A Oxidoreductase, short c 86.0 1.8 6.1E-05 38.9 7.4 76 121-197 8-93 (267)
424 3rku_A Oxidoreductase YMR226C; 85.9 2.6 8.8E-05 38.5 8.5 76 122-197 32-123 (287)
425 3ce6_A Adenosylhomocysteinase; 85.8 2.3 7.9E-05 42.2 8.6 86 120-227 271-359 (494)
426 2eez_A Alanine dehydrogenase; 85.5 0.58 2E-05 44.7 4.0 98 121-227 164-264 (369)
427 3o8q_A Shikimate 5-dehydrogena 85.5 5.3 0.00018 36.4 10.3 80 109-196 112-194 (281)
428 2cdc_A Glucose dehydrogenase g 84.9 2 6.9E-05 40.7 7.5 85 123-227 181-276 (366)
429 3u5t_A 3-oxoacyl-[acyl-carrier 84.9 3.4 0.00012 37.2 8.7 74 121-197 25-113 (267)
430 4a27_A Synaptic vesicle membra 84.8 0.39 1.3E-05 45.4 2.4 95 114-227 134-236 (349)
431 1e7w_A Pteridine reductase; di 84.7 6.6 0.00023 35.6 10.7 61 121-184 7-73 (291)
432 4e12_A Diketoreductase; oxidor 84.5 3.6 0.00012 37.4 8.7 96 124-228 5-120 (283)
433 1id1_A Putative potassium chan 84.5 2.9 0.0001 33.9 7.4 90 123-226 3-102 (153)
434 1f0y_A HCDH, L-3-hydroxyacyl-C 84.3 4.4 0.00015 37.1 9.3 95 124-227 16-134 (302)
435 4imr_A 3-oxoacyl-(acyl-carrier 84.3 1.6 5.4E-05 39.6 6.2 74 121-197 31-117 (275)
436 3l9w_A Glutathione-regulated p 84.0 2.3 8E-05 41.2 7.6 89 123-226 4-99 (413)
437 1xg5_A ARPG836; short chain de 84.0 3.7 0.00013 36.9 8.7 76 121-197 30-119 (279)
438 3ucx_A Short chain dehydrogena 83.9 4.9 0.00017 35.9 9.3 74 121-197 9-96 (264)
439 3ppi_A 3-hydroxyacyl-COA dehyd 83.8 4.2 0.00014 36.6 8.9 70 121-196 28-110 (281)
440 1ae1_A Tropinone reductase-I; 83.7 3.1 0.00011 37.5 7.9 74 121-197 19-107 (273)
441 1lss_A TRK system potassium up 83.6 9.5 0.00033 29.7 10.1 66 123-196 4-76 (140)
442 3qiv_A Short-chain dehydrogena 83.3 4.1 0.00014 35.9 8.5 74 121-197 7-94 (253)
443 3k6j_A Protein F01G10.3, confi 83.1 4.8 0.00017 39.5 9.4 97 124-230 55-167 (460)
444 3ksu_A 3-oxoacyl-acyl carrier 83.0 4.6 0.00016 36.1 8.7 74 121-197 9-99 (262)
445 4a0s_A Octenoyl-COA reductase/ 82.9 1.4 4.7E-05 43.1 5.5 96 118-228 216-335 (447)
446 3gqv_A Enoyl reductase; medium 82.8 1.8 6.1E-05 41.2 6.1 89 121-227 163-261 (371)
447 4da9_A Short-chain dehydrogena 82.2 5 0.00017 36.3 8.8 75 120-197 26-115 (280)
448 3tjr_A Short chain dehydrogena 81.7 4.9 0.00017 36.8 8.6 74 121-197 29-116 (301)
449 4ibo_A Gluconate dehydrogenase 81.7 2.1 7.3E-05 38.6 6.0 74 121-197 24-111 (271)
450 3gaf_A 7-alpha-hydroxysteroid 81.6 4.3 0.00015 36.1 7.9 74 121-197 10-97 (256)
451 2g5c_A Prephenate dehydrogenas 81.3 6.8 0.00023 35.2 9.3 87 125-227 3-94 (281)
452 3c24_A Putative oxidoreductase 81.2 8.6 0.00029 34.7 10.0 83 124-226 12-98 (286)
453 3o38_A Short chain dehydrogena 81.2 4.5 0.00015 36.0 8.0 75 121-197 20-109 (266)
454 3p2y_A Alanine dehydrogenase/p 81.1 0.49 1.7E-05 45.3 1.4 40 122-162 183-225 (381)
455 3zwc_A Peroxisomal bifunctiona 81.1 8.3 0.00028 40.3 10.8 99 124-232 317-432 (742)
456 3hwr_A 2-dehydropantoate 2-red 81.0 4.4 0.00015 37.5 8.0 90 122-227 18-118 (318)
457 3lf2_A Short chain oxidoreduct 81.0 5.5 0.00019 35.6 8.5 76 121-197 6-95 (265)
458 2f1k_A Prephenate dehydrogenas 80.9 7.6 0.00026 34.8 9.5 84 125-226 2-88 (279)
459 4hp8_A 2-deoxy-D-gluconate 3-d 80.8 5.5 0.00019 35.6 8.2 74 120-197 6-87 (247)
460 1g0o_A Trihydroxynaphthalene r 80.8 5.5 0.00019 35.9 8.5 74 121-197 27-115 (283)
461 2g1u_A Hypothetical protein TM 80.7 3 0.0001 34.0 6.0 69 120-196 16-91 (155)
462 2ew2_A 2-dehydropantoate 2-red 80.7 11 0.00037 34.3 10.6 89 124-227 4-106 (316)
463 3nyw_A Putative oxidoreductase 80.5 4.9 0.00017 35.6 7.9 76 121-197 5-95 (250)
464 4dio_A NAD(P) transhydrogenase 80.5 0.51 1.8E-05 45.6 1.3 40 122-162 189-231 (405)
465 3n58_A Adenosylhomocysteinase; 80.4 9.4 0.00032 37.2 10.1 86 119-226 243-331 (464)
466 3rkr_A Short chain oxidoreduct 80.2 5.1 0.00017 35.7 7.9 75 120-197 26-114 (262)
467 3f1l_A Uncharacterized oxidore 80.1 4.2 0.00014 36.1 7.3 75 121-197 10-100 (252)
468 3tnl_A Shikimate dehydrogenase 80.1 4.8 0.00017 37.4 7.9 87 107-196 138-233 (315)
469 3rd5_A Mypaa.01249.C; ssgcid, 80.0 3.9 0.00013 37.1 7.2 71 121-197 14-94 (291)
470 3k96_A Glycerol-3-phosphate de 80.0 4.2 0.00014 38.5 7.5 94 123-227 29-131 (356)
471 3pwz_A Shikimate dehydrogenase 79.9 7.8 0.00027 35.1 9.0 81 108-196 104-188 (272)
472 3tfo_A Putative 3-oxoacyl-(acy 79.7 4.8 0.00016 36.1 7.6 73 122-197 3-89 (264)
473 3v8b_A Putative dehydrogenase, 79.7 4.9 0.00017 36.4 7.7 74 121-197 26-113 (283)
474 3gvp_A Adenosylhomocysteinase 79.7 7.3 0.00025 37.8 9.1 84 120-226 217-304 (435)
475 3mog_A Probable 3-hydroxybutyr 79.4 12 0.0004 37.0 10.9 95 124-228 6-119 (483)
476 3pi7_A NADH oxidoreductase; gr 79.4 1.8 6.2E-05 40.6 4.8 89 121-227 162-261 (349)
477 1h2b_A Alcohol dehydrogenase; 79.4 3.1 0.0001 39.3 6.4 44 118-162 182-229 (359)
478 3f9i_A 3-oxoacyl-[acyl-carrier 79.3 4.1 0.00014 35.8 7.0 73 119-197 10-92 (249)
479 3svt_A Short-chain type dehydr 79.3 6.6 0.00023 35.3 8.5 76 121-197 9-99 (281)
480 3sju_A Keto reductase; short-c 79.3 5.7 0.00019 35.8 8.0 74 121-197 22-109 (279)
481 1iy8_A Levodione reductase; ox 79.0 6.7 0.00023 35.0 8.4 76 121-197 11-100 (267)
482 3d1l_A Putative NADP oxidoredu 78.9 7.7 0.00026 34.6 8.7 88 123-227 10-100 (266)
483 3ond_A Adenosylhomocysteinase; 78.7 11 0.00037 37.2 10.2 84 120-226 262-349 (488)
484 1qsg_A Enoyl-[acyl-carrier-pro 78.3 15 0.00053 32.4 10.6 73 121-197 7-95 (265)
485 2pd4_A Enoyl-[acyl-carrier-pro 78.1 8.7 0.0003 34.4 8.9 73 121-197 4-92 (275)
486 2hwk_A Helicase NSP2; rossman 77.9 3.7 0.00013 37.3 5.9 85 130-226 149-251 (320)
487 3awd_A GOX2181, putative polyo 77.8 8 0.00027 34.0 8.5 74 121-197 11-98 (260)
488 3t7c_A Carveol dehydrogenase; 77.8 7.9 0.00027 35.2 8.6 75 120-197 25-125 (299)
489 1yb1_A 17-beta-hydroxysteroid 77.7 9.6 0.00033 34.0 9.0 75 120-197 28-116 (272)
490 3l4b_C TRKA K+ channel protien 77.5 7.3 0.00025 33.6 7.9 86 125-226 2-96 (218)
491 3o26_A Salutaridine reductase; 77.3 5.7 0.0002 36.0 7.5 75 121-197 10-99 (311)
492 3imf_A Short chain dehydrogena 77.1 4 0.00014 36.3 6.2 74 121-197 4-91 (257)
493 3r1i_A Short-chain type dehydr 77.1 5.3 0.00018 36.0 7.1 74 121-197 30-117 (276)
494 3sx2_A Putative 3-ketoacyl-(ac 77.0 7.8 0.00027 34.7 8.2 74 121-197 11-110 (278)
495 3b1f_A Putative prephenate deh 76.9 17 0.00059 32.6 10.6 87 124-226 7-98 (290)
496 3gg2_A Sugar dehydrogenase, UD 76.7 9.5 0.00033 37.3 9.2 99 124-227 3-120 (450)
497 3uve_A Carveol dehydrogenase ( 76.6 8.2 0.00028 34.7 8.3 74 121-197 9-112 (286)
498 2y0c_A BCEC, UDP-glucose dehyd 76.4 5.9 0.0002 39.1 7.7 102 122-228 7-127 (478)
499 3pgx_A Carveol dehydrogenase; 76.3 8.6 0.00029 34.5 8.3 75 120-197 12-113 (280)
500 3g0o_A 3-hydroxyisobutyrate de 76.1 6.3 0.00022 36.1 7.4 86 124-226 8-99 (303)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=4e-62 Score=474.87 Aligned_cols=319 Identities=39% Similarity=0.712 Sum_probs=286.8
Q ss_pred ccccccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHH
Q 015306 82 TSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAK 161 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~ 161 (409)
..++.||++|+++++|..||+|..|+.+|.++|.++....+|++|||||||+|++++++|++|+++|+|||.|++++.|+
T Consensus 43 ~~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~ 122 (376)
T 4hc4_A 43 ERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAR 122 (376)
T ss_dssp ------CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHH
T ss_pred cchhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHH
Confidence 44578999999999999999999999999999998777789999999999999999999999999999999988779999
Q ss_pred HHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEccccc
Q 015306 162 QIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE 241 (409)
Q Consensus 162 ~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~ 241 (409)
+++..|++.++|++++++++++.++ ++||+|||+++++++.++.+++.++.++.++|||||.++|+.+++|++++++..
T Consensus 123 ~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~ 201 (376)
T 4hc4_A 123 EVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQM 201 (376)
T ss_dssp HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred HHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccceEEEEEeccch
Confidence 9999999999999999999999988 899999999999999999999999999999999999999999999999999854
Q ss_pred cchhhhcccccc---ccccchhhhhhhc------cCCeEEeeCCCcccCcccceeEeeCCCCCCCC---CceeeeeEEEE
Q 015306 242 YKDDKIEFWNNV---YGFDMSCIKKQAM------MEPLVDTVDQNQIVTNCQLLKTMDISKMGPGD---ASFTAPFKLVA 309 (409)
Q Consensus 242 ~~~~~~~~w~~~---~g~d~~~~~~~~~------~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~---~~~~~~~~~~~ 309 (409)
+ .....+|.++ ||||++++..... .+|+++.+.+..+|++|+.+++|||.+.+.++ ..+..+|++.+
T Consensus 202 l-~~~i~~w~~v~~~yGfd~s~~~~~~~~~~~~~~e~~v~~~~~~~~Ls~p~~i~~~D~~~~~~~~~~~~~~~~~f~~~~ 280 (376)
T 4hc4_A 202 L-EWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSC 280 (376)
T ss_dssp H-HHHHHGGGGHHHHHSCCCGGGHHHHHHHHHSSCEEEEECCCGGGBCSCCEEEEEEETTCTTHHHHHHHCEEEEEEEEC
T ss_pred h-hhhhcchhccccccCcCchhhhhhhhhhhcccCceEEEeecccccccCCEEEEEEECCCCCccccccccceeEEEEEe
Confidence 4 4457789876 9999999877653 46888888899999999999999999877542 34677889999
Q ss_pred eecceEeEEEEEEEEEEcC--CCceeEeecccccCCCCCCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEE
Q 015306 310 QRNDYIHALVAYFDVTFTK--CHKLMGFSTVYNTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDI 387 (409)
Q Consensus 310 ~~~g~~~g~~~wf~~~l~~--~~~~~~ls~~~~t~p~~~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~ 387 (409)
.++|.+|||++||++.|++ ++.++.|| |+|..+.|||+|++|+|++|+.|++|++|++++.+++++.++|+++|
T Consensus 281 ~~~g~vhg~~~WFd~~f~~~~~~~~v~lS----T~P~~~~THW~Q~v~~L~~Pi~V~~G~~I~g~i~~~~~~~n~R~~~i 356 (376)
T 4hc4_A 281 YGSAPMHGFAIWFQVTFPGGESEKPLVLS----TSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRV 356 (376)
T ss_dssp CSSEEEEEEEEEEEEEECCCC--CCEEEE----CCTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCTTSEEE
T ss_pred cCCcEEEEEEEEEEEEecCCCCCCceEEe----CCCCcCCCceeeEEEEeCCceEeCCCCEEEEEEEEEECCCCCceeEE
Confidence 9999999999999999975 24578999 99999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcceeeeecceEEeeeC
Q 015306 388 MLKYSLQGRHSAISRIQYYKMR 409 (409)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~ 409 (409)
+|+|+++++..+ ++.|+|+
T Consensus 357 ~i~~~~~~~~~~---~~~~~~~ 375 (376)
T 4hc4_A 357 LLRYKVGDQEEK---TKDFAME 375 (376)
T ss_dssp EEEEEETTSCCE---EEEEEEC
T ss_pred EEEEEeCCCCcc---eEEEeCC
Confidence 999999987644 4889986
No 2
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=4.2e-56 Score=432.96 Aligned_cols=325 Identities=60% Similarity=1.026 Sum_probs=299.6
Q ss_pred CccccccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHH
Q 015306 81 KTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMA 160 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a 160 (409)
+...+.||+.|+.+.+|..|++|..|+..|.++|.......++++|||||||+|.+++.+++.|+.+|+|+|+|++++.|
T Consensus 25 ~~~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a 104 (349)
T 3q7e_A 25 MTSKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYA 104 (349)
T ss_dssp ------------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHH
T ss_pred cchHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHH
Confidence 44557899999999999999999999999999998776778899999999999999999999988899999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEcccc
Q 015306 161 KQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDA 240 (409)
Q Consensus 161 ~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~ 240 (409)
++++..+++.++++++++|+++++++.++||+|+++++++++.++..++.++.++.++|||||+++|..+..++.++...
T Consensus 105 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~ 184 (349)
T 3q7e_A 105 VKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDR 184 (349)
T ss_dssp HHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCH
T ss_pred HHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceEEEeeecCh
Confidence 99999999998999999999999888889999999998888888999999999999999999999999999999999998
Q ss_pred ccchhhhccccccccccchhhhhhhccCCeEEeeCCCcccCcccceeEeeCCCCCCCCCceeeeeEEEEeecceEeEEEE
Q 015306 241 EYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFTAPFKLVAQRNDYIHALVA 320 (409)
Q Consensus 241 ~~~~~~~~~w~~~~g~d~~~~~~~~~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 320 (409)
.+......+|.+++|+|++.+.+..+.+|+++.+++..++++|+.+.++|+.+.+.+++.+..++++.+.++|.+|||++
T Consensus 185 ~~~~~~~~~w~~~~G~d~~~~~~~~~~~p~v~~~~~~~~~~~~~~~~~~dl~~~~~~~l~~~~~~~~~~~~~~~~~g~~~ 264 (349)
T 3q7e_A 185 QYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVA 264 (349)
T ss_dssp HHHHHHTGGGGCBTTBCCGGGHHHHHTSCEEECCCGGGEEEEEEEEEEEETTTCCGGGGSEEEEEEEEBCSSEEEEEEEE
T ss_pred hhhhhhhcccccccCcchHHHhHhhhcCcEEEEEChhhEecccEEEEEEEcccCchhhcceeeeEEEEEccCCEEEEEEE
Confidence 88888889999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred EEEEEEcCCCceeEeecccccCCCCCCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEEEEEEEEcceeeee
Q 015306 321 YFDVTFTKCHKLMGFSTVYNTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAI 400 (409)
Q Consensus 321 wf~~~l~~~~~~~~ls~~~~t~p~~~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 400 (409)
||++.|+++++++.|| |+|..+.|||+|++|+|++|+.|++|++|++++++++++.++|+++|+|+|+++|+..++
T Consensus 265 ~Fd~~~~~~~~~v~ls----t~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 340 (349)
T 3q7e_A 265 YFNIEFTRCHKRTGFS----TSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCEL 340 (349)
T ss_dssp EEEEECTTSSSCCEEE----CSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCSSCEEEEEEEEEECSSCEE
T ss_pred EEEEEecCCCCccEEE----CCCCcCCCcceeEEEEECCceEeCCCCEEEEEEEEEECCCCCeeEEEEEEEEeCCccccc
Confidence 9999999777789999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEeeeC
Q 015306 401 SRIQYYKMR 409 (409)
Q Consensus 401 ~~~~~~~~~ 409 (409)
.++++|+||
T Consensus 341 ~~~~~~~~~ 349 (349)
T 3q7e_A 341 SCSTDYRMR 349 (349)
T ss_dssp EEEEEEEEC
T ss_pred ccCceEecC
Confidence 999999997
No 3
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=1.3e-55 Score=426.11 Aligned_cols=320 Identities=51% Similarity=0.905 Sum_probs=301.3
Q ss_pred ccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHHH
Q 015306 86 YYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVE 165 (409)
Q Consensus 86 ~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~~ 165 (409)
.||+.|+++.+|..|++|..|+..|.++|.+.....++.+|||||||+|.+++.+++.|+.+|+|+|++++++.|++++.
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~ 81 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVE 81 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHH
T ss_pred chhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHH
Confidence 59999999999999999999999999999877777789999999999999999999998889999999998899999999
Q ss_pred HcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEccccccchh
Q 015306 166 ANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDD 245 (409)
Q Consensus 166 ~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~~ 245 (409)
.+++.++++++.+|+.+++++.++||+|+++++++++.++..+..++.++.++|||||+++|+.+++|+.++....+...
T Consensus 82 ~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 161 (328)
T 1g6q_1 82 LNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQYKDE 161 (328)
T ss_dssp HTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHH
T ss_pred HcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEecCchhhhh
Confidence 99998899999999999887778999999999888888888999999999999999999999999999999998877777
Q ss_pred hhccccccccccchhhhhhhccCCeEEeeCCCcccCcccceeEeeCCCCCCCCCceeeeeEEEEeecceEeEEEEEEEEE
Q 015306 246 KIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFTAPFKLVAQRNDYIHALVAYFDVT 325 (409)
Q Consensus 246 ~~~~w~~~~g~d~~~~~~~~~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~wf~~~ 325 (409)
...+|.+.+|++++.+.+....+|+++.+++..++++|+.++++||.+...+++.+...+++.+.++|.+|||++||+++
T Consensus 162 ~~~~w~~~~gf~~~~~~~~~~~~~~v~~~~~~~~ls~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~wfd~~ 241 (328)
T 1g6q_1 162 KLNYWQDVYGFDYSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLNTVKISDLAFKSNFKLTAKRQDMINGIVTWFDIV 241 (328)
T ss_dssp HHHHTTCBTTBCCTTHHHHHTTSCEEECCCGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEEBCSSCEEEEEEEEEEEE
T ss_pred hhcccccccCcChHHHhhhhhcCCeEEEeccceeecCCEEEEEEECCCCChhHhceeeeEEEEEecCcEEEEEEEEEEEE
Confidence 77899999999999999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred EcC--CCceeEeecccccCCCCCCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEEEEEEEEcceee-----
Q 015306 326 FTK--CHKLMGFSTVYNTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHS----- 398 (409)
Q Consensus 326 l~~--~~~~~~ls~~~~t~p~~~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~----- 398 (409)
|++ +++++.+| |+|..+.+||+|++|+|++|+.|++|++|++++++++++.++|+++|+++|+++|+..
T Consensus 242 ~~~~~~~~~v~ls----t~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 317 (328)
T 1g6q_1 242 FPAPKGKRPVEFS----TGPHAPYTHWKQTIFYFPDDLDAETGDTIEGELVCSPNEKNNRDLNIKISYKFESNGIDGNSR 317 (328)
T ss_dssp CCCCTTSCCCEEE----CSTTSCCCTTCEEEEEEEEEEECCTTCEEEEEEEEEEETTEEEEEEEEEEEEEECCSSTHHHH
T ss_pred cCCCCCCCceEEE----CCCCcCCCcceeEEEEeCCceecCCCCEEEEEEEEEECCCCCceEEEEEEEEecCccCccccc
Confidence 986 56689999 9999999999999999999999999999999999999999999999999999999988
Q ss_pred eecceEEeeeC
Q 015306 399 AISRIQYYKMR 409 (409)
Q Consensus 399 ~~~~~~~~~~~ 409 (409)
...++|+|+|+
T Consensus 318 ~~~~~~~~~~~ 328 (328)
T 1g6q_1 318 SRKNEGSYLMH 328 (328)
T ss_dssp CEEEEEEEEEC
T ss_pred ccccceeEEeC
Confidence 88899999996
No 4
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=4.5e-52 Score=403.04 Aligned_cols=314 Identities=48% Similarity=0.851 Sum_probs=289.2
Q ss_pred ccccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHH
Q 015306 84 ADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~ 163 (409)
+..||+.|..+.+|..|++|..|+..|.++|.+.....++.+|||||||+|.+++.+++.|+.+|+|+|+|++++.|+++
T Consensus 26 d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~ 105 (340)
T 2fyt_A 26 DGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDI 105 (340)
T ss_dssp ----CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHH
T ss_pred hhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHH
Confidence 35599999999999999999999999999999887788999999999999999999999988899999999988999999
Q ss_pred HHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEccccccc
Q 015306 164 VEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYK 243 (409)
Q Consensus 164 ~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~ 243 (409)
+..+++.++++++.+|+.+++++.++||+|+++++++++.++..++.++.++.++|||||+++|+.+++++.++....+.
T Consensus 106 ~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~ 185 (340)
T 2fyt_A 106 IRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKH 185 (340)
T ss_dssp HHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHH
T ss_pred HHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEEEEEecchhHh
Confidence 99999988899999999998887789999999998888888889999999999999999999999999999999888887
Q ss_pred hhhhccccccccccchhhhhhhccCCeEEeeCCCcccCcccceeEeeCCCCCCCCCceeeeeEEEEeecceEeEEEEEEE
Q 015306 244 DDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFTAPFKLVAQRNDYIHALVAYFD 323 (409)
Q Consensus 244 ~~~~~~w~~~~g~d~~~~~~~~~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~wf~ 323 (409)
.....+|.+.+|++++.+.+..+.+|+++.+++..++++|+.++++||.+...++..+...+.+.+.++|.+|||++||+
T Consensus 186 ~~~~~~w~~~~g~~~~~~~~~~~~~~~v~~~~~~~~ls~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wfd 265 (340)
T 2fyt_A 186 ADRIAFWDDVYGFKMSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTSISDLEFSSDFTLKITRTSMCTAIAGYFD 265 (340)
T ss_dssp HHHTGGGGCBTTBCCGGGHHHHTTBCEEECCCGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEEBCSCEEEEEEEEEEE
T ss_pred hhhhcccccccCcChHHHHHhhhcCcEEEEechhhcccCCEEEEEEECCCCcccccceEeeEEEEEccCcEEEEEEEEEE
Confidence 77888999999999999999888999999888889999999999999999888888888899999999999999999999
Q ss_pred EEEc-CCCceeEeecccccCCCCCCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEEEEEEEEcceeeeecc
Q 015306 324 VTFT-KCHKLMGFSTVYNTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISR 402 (409)
Q Consensus 324 ~~l~-~~~~~~~ls~~~~t~p~~~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 402 (409)
+.|+ ++++++.|| |+|..+.+||+|++|+|++|+.|++|++|++++++++++.+.|+++|+|+|+. +
T Consensus 266 ~~~~~~~~~~v~ls----t~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~--------~ 333 (340)
T 2fyt_A 266 IYFEKNCHNRVVFS----TGPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKNKKDPRSLTVTLTLNN--------S 333 (340)
T ss_dssp EEECTTCSSCEEEE----CSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCTTSEEEEEEETT--------E
T ss_pred EEeecCCCCCEEEE----CCCCcCCCccccEEEEeCCceEcCCCCEEEEEEEEEECCCCCceEEEEEEEEc--------c
Confidence 9993 455689999 99999999999999999999999999999999999999999999999999963 3
Q ss_pred eEEeeeC
Q 015306 403 IQYYKMR 409 (409)
Q Consensus 403 ~~~~~~~ 409 (409)
+|.|+||
T Consensus 334 ~~~~~~~ 340 (340)
T 2fyt_A 334 TQTYGLQ 340 (340)
T ss_dssp EEEEEEC
T ss_pred eEEEecC
Confidence 6888886
No 5
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=3.8e-51 Score=401.84 Aligned_cols=313 Identities=33% Similarity=0.619 Sum_probs=284.6
Q ss_pred ccccccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHH
Q 015306 82 TSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAK 161 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~ 161 (409)
...+.||+.|+.+..|..|++|..++..|.++|.......++.+|||||||+|.+++.+++.|+++|+|+|+|++++.|+
T Consensus 23 ~~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~ 102 (376)
T 3r0q_C 23 VDYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHAR 102 (376)
T ss_dssp -----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHH
T ss_pred ccHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHH
Confidence 34477999999999999999999999999999988888889999999999999999999999888999999999889999
Q ss_pred HHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEccccc
Q 015306 162 QIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAE 241 (409)
Q Consensus 162 ~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~ 241 (409)
+++..+++.++++++++|++++.++ ++||+|+++++++++.++.++..++.++.++|||||+++|+.+++|..++....
T Consensus 103 ~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 181 (376)
T 3r0q_C 103 ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNI 181 (376)
T ss_dssp HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTH
T ss_pred HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchH
Confidence 9999999999999999999999887 899999999988999888899999999999999999999999999999998876
Q ss_pred cchhhh----------ccc---cccccccchhhhhh--------hccCCeEEeeCCCcccCcccceeEeeCCCCCCCCCc
Q 015306 242 YKDDKI----------EFW---NNVYGFDMSCIKKQ--------AMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDAS 300 (409)
Q Consensus 242 ~~~~~~----------~~w---~~~~g~d~~~~~~~--------~~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~~~ 300 (409)
+..... .|| .+.+|++++.+.+. .+.+|+++.+.+..++++|+.++++||.+...+++.
T Consensus 182 ~~~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~lt~~~~~~~~d~~~~~~~~l~ 261 (376)
T 3r0q_C 182 ADRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIE 261 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHHHHHHHHTSBCEEECCCGGGBCBCCEEEEEEETTTCCGGGTS
T ss_pred HhhhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhhhhhhhcccCceEEEEChHHccCCCeEEEEEEcCcCCHHHhc
Confidence 654443 678 78999999999887 568999999999999999999999999999888875
Q ss_pred -eeeeeEEEE-eecceEeEEEEEEEEEEcCC-----CceeEeecccccCCC-CCCCCceeEEEecCCceecCCCCEEEEE
Q 015306 301 -FTAPFKLVA-QRNDYIHALVAYFDVTFTKC-----HKLMGFSTVYNTGPK-SRATHWKQTVLYLEDVLTICEGEAISGS 372 (409)
Q Consensus 301 -~~~~~~~~~-~~~g~~~g~~~wf~~~l~~~-----~~~~~ls~~~~t~p~-~~~~~W~q~v~~l~~p~~v~~g~~i~~~ 372 (409)
+..+|++.+ .++|.+|||++||+++|++. ++++.|| |+|. .+.|||+|++|+|++|+.|++|++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~~~~~v~lS----t~P~~~~~thW~q~~~~l~~p~~v~~g~~i~~~ 337 (376)
T 3r0q_C 262 EVRSNVTSVINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELT----TAPSEQHCTHWGQQVFIMSNPINVEEGDNLNLG 337 (376)
T ss_dssp EEEEEEEEBCSCSCEEEEEEEEEEEEEEEEETTEEEEEEEEEE----CCCCSSCCCTTCEEEEEEEEEEEECTTCEEEEE
T ss_pred ccccceEEEEeccCceEEEEEEEEEEEecCCccCCCCCccEEE----CCCCcCCCCceeeEEEEECCceecCCCCEEEEE
Confidence 788999999 99999999999999999742 2468999 9998 5689999999999999999999999999
Q ss_pred EEEeeCCCCCceeEEEEEEEEcceeee
Q 015306 373 LTVAPNKKNPRDVDIMLKYSLQGRHSA 399 (409)
Q Consensus 373 ~~~~~~~~~~r~~~~~~~~~~~~~~~~ 399 (409)
+.+++++.++|+++|+|+|.++++...
T Consensus 338 ~~~~~~~~~~r~~~~~~~~~~~~~~~~ 364 (376)
T 3r0q_C 338 LLMSRSKENHRLMEIELNCEIKEASGN 364 (376)
T ss_dssp EEEEECSSCTTSEEEEEEEEEECSSSC
T ss_pred EEEEECCCCCeeEEEEEEEEecCcCCC
Confidence 999999999999999999999988754
No 6
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=1.3e-44 Score=370.00 Aligned_cols=292 Identities=21% Similarity=0.294 Sum_probs=251.0
Q ss_pred hhHHhhcChHhHHHHHHHHHhcc--------CCCCCCEEEEEcCCCChHHHHHHHcCC---C--EEEEEecHHHHHHHHH
Q 015306 96 IHEEMLKDVVRTKSYQNVIYQNK--------FLFKDKVVLDVGAGTGILSLFCAKAGA---A--HVYAVECSQMANMAKQ 162 (409)
Q Consensus 96 ~~~~~l~d~~r~~~~~~~l~~~~--------~~~~~~~VLDlGcG~G~l~~~la~~g~---~--~V~~vD~s~~~~~a~~ 162 (409)
.++.+-+|..++..|.+||.++. ....+.+|||||||+|.|+..++++|+ . +|+|||.|+++..|++
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~ 402 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLE 402 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHH
T ss_pred hhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH
Confidence 34457789999999999997642 223456899999999999666666543 3 7899999998888999
Q ss_pred HHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEcccccc
Q 015306 163 IVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEY 242 (409)
Q Consensus 163 ~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~ 242 (409)
....|++.++|+++++|++++.+| +++|+||||+||+++.+|.++ .++.++.++|||||+++|+.+++|++|+++..+
T Consensus 403 ~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimiPs~atlyiapi~~~~l 480 (637)
T 4gqb_A 403 NWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKL 480 (637)
T ss_dssp HHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEESCEEEEEEEEEECHHH
T ss_pred HHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEccccceEEEEEecCHHH
Confidence 999999999999999999999998 899999999999999999987 688999999999999999999999999999999
Q ss_pred chhhhccccccccccchhhhhhhccCCeEEeeCCCcccCcccceeEeeCCCCCC-CCCceeeeeEEEEeecceEeEEEEE
Q 015306 243 KDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGP-GDASFTAPFKLVAQRNDYIHALVAY 321 (409)
Q Consensus 243 ~~~~~~~w~~~~g~d~~~~~~~~~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~w 321 (409)
+.+...+|...++++.. +..|++..+.+...+++|+.+++||+.+... .+..+..+++|++.++|++|||++|
T Consensus 481 ~~e~~~~~~~~~~~~~~------~~~p~Vv~~~~~~~Ls~p~~~~~fd~~~~~~~~~~~~~~~~~f~i~~~g~vhGf~~w 554 (637)
T 4gqb_A 481 YNEVRACREKDRDPEAQ------FEMPYVVRLHNFHQLSAPQPCFTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGY 554 (637)
T ss_dssp HHHHHTTCCTTSCTTGG------GGSCEECBCCSCEECSCCEEEEEEESSCCSTTCCCCEEEEEEEECCSCEEEEEEEEE
T ss_pred HHHHHhcccccccchhh------cCCcEEEEecCccccCCCEEEEEEECCCCCccccceEEEEEEEEecCCcEEEEEEEE
Confidence 88888888888777542 4678888888889999999999999987554 3456788999999999999999999
Q ss_pred EEEEEcCCCceeEeecccccCCCC---CCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEEEEEEEEccee-
Q 015306 322 FDVTFTKCHKLMGFSTVYNTGPKS---RATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRH- 397 (409)
Q Consensus 322 f~~~l~~~~~~~~ls~~~~t~p~~---~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~- 397 (409)
|++.|++ ++.|| |+|.. +.|||+|++|+|++|+.|++|++|+++|+++.+.. .|+++|.++...
T Consensus 555 FD~~f~~---~V~LS----T~P~~~s~~~THW~Q~vfpL~~Pl~V~~Gd~I~~~~~R~~d~~-----kVWYEW~v~~p~~ 622 (637)
T 4gqb_A 555 FETVLYQ---DITLS----IRPETHSPGMFSWFPILFPIKQPITVREGQTICVRFWRCSNSK-----KVWYEWAVTAPVC 622 (637)
T ss_dssp EEEEEET---TEEEE----CSGGGCCTTCCSCCCEEEEEEEEEEECTTCEEEEEEEEEECSS-----EEEEEEEEEESSC
T ss_pred EEEEeeC---CeEEE----CCCCCCCCCCCcccCeEEEeCCCeEECCCCEEEEEEEEEeCCC-----ceeEEEEEeCCcC
Confidence 9999996 79999 99963 46999999999999999999999999999987763 588888877654
Q ss_pred ---eeecceEEeee
Q 015306 398 ---SAISRIQYYKM 408 (409)
Q Consensus 398 ---~~~~~~~~~~~ 408 (409)
.|.+| .+|.|
T Consensus 623 s~ihN~~G-r~y~i 635 (637)
T 4gqb_A 623 SAIHNPTG-RSYTI 635 (637)
T ss_dssp CCCBSGGG-SSCCE
T ss_pred ccccCCCC-ceeee
Confidence 45666 45554
No 7
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=3.1e-43 Score=342.26 Aligned_cols=306 Identities=37% Similarity=0.588 Sum_probs=259.1
Q ss_pred ccccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHH
Q 015306 84 ADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQI 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~ 163 (409)
.+.||+.|..+..|..|++|..++..|.++|.+.....++.+|||||||+|.+++.+++.|+.+|+|+|+|++++.|+++
T Consensus 12 ~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~ 91 (348)
T 2y1w_A 12 AVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVL 91 (348)
T ss_dssp HHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHH
Confidence 46799999999999999999999999999999888888999999999999999999999988899999999977999999
Q ss_pred HHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEccccccc
Q 015306 164 VEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYK 243 (409)
Q Consensus 164 ~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~ 243 (409)
+..+++.++++++.+|+++++++ ++||+|+++++++++..+..+ ..+..+.++|||||.++|+.++++..++....+.
T Consensus 92 ~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~-~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~ 169 (348)
T 2y1w_A 92 VKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERML-ESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLY 169 (348)
T ss_dssp HHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHH-HHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHH
T ss_pred HHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHH-HHHHHHHhhcCCCeEEEEecCcEEEEEecchHHh
Confidence 99999988899999999998776 789999999887777665554 4455678999999999999999999998876554
Q ss_pred hh---hhcccc--ccccccchhhhhhh----ccCCeEEeeCCCcccCcccceeEeeCCCCCCCCCc-eeeeeEEEEeecc
Q 015306 244 DD---KIEFWN--NVYGFDMSCIKKQA----MMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDAS-FTAPFKLVAQRND 313 (409)
Q Consensus 244 ~~---~~~~w~--~~~g~d~~~~~~~~----~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~g 313 (409)
.. ...+|. .++|+++..+.... +..|+++.... .+...+.....+||.+...+++. +..+++|.+.++|
T Consensus 170 ~~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~f~~p~~d~~~~-~~~~~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~g 248 (348)
T 2y1w_A 170 MEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDI-RILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSG 248 (348)
T ss_dssp HHHHHHHGGGCCSCBTTBCCGGGHHHHHHHHHTSCEEECCCG-GGBCBCCEEEEEETTTCCGGGGSEEEEEEEEEBSSCE
T ss_pred hhhccccCcccccccCcccHHHhhhHHHhhhccCCeEEeECC-eeecCcceEEEEECCcCChHHhceeeeeEEEEEccCc
Confidence 32 345673 57899998876654 45688776543 34444445677899988877764 5788999999999
Q ss_pred eEeEEEEEEEEEEcCCCceeEeecccccCCCCCCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEEEEEEEE
Q 015306 314 YIHALVAYFDVTFTKCHKLMGFSTVYNTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSL 393 (409)
Q Consensus 314 ~~~g~~~wf~~~l~~~~~~~~ls~~~~t~p~~~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~ 393 (409)
.+|||++||+++|++++.++.|| |+|..+.+||+|++|+|++|+.|++|++|++++++++++.+. +++++++.+
T Consensus 249 ~~~g~~~wfd~~~~~~~~~v~lS----t~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~--~~~~~~~~~ 322 (348)
T 2y1w_A 249 LVHGLAFWFDVAFIGSIMTVWLS----TAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQS--YDISIVAQV 322 (348)
T ss_dssp EEEEEEEEEEEEEECSSCEEEEE----CCTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECTTSS--EEEEEEEEE
T ss_pred EEEEEEEEEEEEEcCCCCceEEE----CCCCcCCCeeeeEEEeeCCceEeCCCCEEEEEEEEEECCCCC--cEEEEEEEE
Confidence 99999999999999766689999 999999999999999999999999999999999999988654 666777777
Q ss_pred cceee
Q 015306 394 QGRHS 398 (409)
Q Consensus 394 ~~~~~ 398 (409)
++...
T Consensus 323 ~~~~~ 327 (348)
T 2y1w_A 323 DQTGS 327 (348)
T ss_dssp TTTCC
T ss_pred ccccc
Confidence 77654
No 8
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=6.5e-43 Score=355.19 Aligned_cols=286 Identities=18% Similarity=0.238 Sum_probs=241.5
Q ss_pred hhhHHhhcChHhHHHHHHHHHhccC-CC----CCCEEEEEcCCCChHHHHHHHc----C----------CCEEEEEecHH
Q 015306 95 GIHEEMLKDVVRTKSYQNVIYQNKF-LF----KDKVVLDVGAGTGILSLFCAKA----G----------AAHVYAVECSQ 155 (409)
Q Consensus 95 ~~~~~~l~d~~r~~~~~~~l~~~~~-~~----~~~~VLDlGcG~G~l~~~la~~----g----------~~~V~~vD~s~ 155 (409)
..+..|.+|..|+..|.+||.++.. .. .+++|||||||+|.|+..++++ | +.+|+|||.|+
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 4556799999999999999987642 21 2468999999999997654432 2 23999999999
Q ss_pred -HHHHHHHHHHHcCCCCcEEEEEcccccccCC-----CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 156 -MANMAKQIVEANGFSNVITVLKGKIEEIELP-----VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 156 -~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
++..++... .|++.++|+++++|++++.++ .+++|+|||++||+++.+|.. +.++..+.++|||||++||+.
T Consensus 457 ~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~-pe~Ld~v~r~Lkp~Gi~iP~~ 534 (745)
T 3ua3_A 457 NAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELS-PECLDGVTGFLKPTTISIPQK 534 (745)
T ss_dssp HHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSH-HHHHHTTGGGSCTTCEEESCE
T ss_pred HHHHHHHHHH-hcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhcc-HHHHHHHHHhCCCCcEEECCc
Confidence 665555544 489999999999999999873 489999999999999988755 457777789999999999999
Q ss_pred CceEEEEccccccchhhhccccc--cccccc-------------------hhhhhhhccCCeEEeeCCCcccCc-cccee
Q 015306 230 ASLYLTAIEDAEYKDDKIEFWNN--VYGFDM-------------------SCIKKQAMMEPLVDTVDQNQIVTN-CQLLK 287 (409)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~w~~--~~g~d~-------------------~~~~~~~~~~p~~~~~~~~~~ls~-p~~~~ 287 (409)
+++|++|+.++.++.+...++.. ++||+. ++.....+.+|++..+.+..+|++ |++++
T Consensus 535 ~t~ylaPi~~~~l~~~v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e~PyVv~l~~~~~Ls~~pq~vf 614 (745)
T 3ua3_A 535 YTSYVKPIMSTHIHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMDQIYVVYLSKYIPLAETTKPVF 614 (745)
T ss_dssp EEEEEEEEECHHHHHHHHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHSSCEEECCCSCEESSSSCEEEE
T ss_pred cEEEEEEecCHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccEEEeeccceecCCCCceEE
Confidence 99999999999887766555532 345521 344666789999999999999999 99999
Q ss_pred EeeCCCCCCCCCceeeeeEEEEeecceEeEEEEEEEEEEcCCCceeEeecccccCCCCC---CCCceeEEEecCCceecC
Q 015306 288 TMDISKMGPGDASFTAPFKLVAQRNDYIHALVAYFDVTFTKCHKLMGFSTVYNTGPKSR---ATHWKQTVLYLEDVLTIC 364 (409)
Q Consensus 288 ~~d~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~wf~~~l~~~~~~~~ls~~~~t~p~~~---~~~W~q~v~~l~~p~~v~ 364 (409)
+||+.+...++..+...++|.+.++|.+|||++||++.|++ ++.|| |+|..+ .+||+|++|||++|+.|+
T Consensus 615 tFdhp~~~~~d~~r~~~~~F~~~r~g~iHGfagwFDi~Lyk---~V~LS----T~P~t~s~~mThWfQtfFPL~ePL~V~ 687 (745)
T 3ua3_A 615 TFEHPNFMNSSNERSDSIEFVMDRNADLMGFAGYFDLQLYK---TVMLS----IEPSTHTPGMVSWFPAVIPLRDQLRVG 687 (745)
T ss_dssp EEESSCTTCCCSCEEEEEEEECCSSEEEEEEEEEEEEEEET---TEEEE----CSSTTCCTTCCSCCCEEEEEEEEEEEC
T ss_pred EEECCCCCccccceeEEEEEEeCCCcEEEEEEEEEEEEecC---CcEEe----cCCCCCCCCCccceeEEEecCCceEeC
Confidence 99999988788889999999999999999999999999996 79999 999875 689999999999999999
Q ss_pred CCCEEEEEEEEeeCCCCCceeEEEEEEEEc
Q 015306 365 EGEAISGSLTVAPNKKNPRDVDIMLKYSLQ 394 (409)
Q Consensus 365 ~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~ 394 (409)
+|+.|+++++++.+. ..||++|.++
T Consensus 688 ~GdeI~g~~~R~~d~-----~kVWYEW~v~ 712 (745)
T 3ua3_A 688 EGDRISLKIDRKVDN-----TGVWYEWHVE 712 (745)
T ss_dssp TTCEEEEEEEEEEET-----TEEEEEEEEE
T ss_pred CCCEEEEEEEEEcCC-----CCEEEEEEEE
Confidence 999999999998765 3788888876
No 9
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-40 Score=336.09 Aligned_cols=305 Identities=36% Similarity=0.585 Sum_probs=255.0
Q ss_pred cccccccCchhhhHHhhcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHH
Q 015306 85 DYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIV 164 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~ 164 (409)
+.|++.|.....+..|+.|..+++.+.+++.......++.+|||||||+|.+++.+++.|+.+|+|+|+|++++.|++++
T Consensus 121 ~~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~ 200 (480)
T 3b3j_A 121 VQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLV 200 (480)
T ss_dssp CEEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHH
T ss_pred hhHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHH
Confidence 35666776656688899999999999999988777778899999999999999999998888999999999779999999
Q ss_pred HHcCCCCcEEEEEcccccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCceEEEEccccccch
Q 015306 165 EANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKD 244 (409)
Q Consensus 165 ~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~ 244 (409)
..+++.++++++.+|+.+++++ ++||+|+++++++++..+..+. .+..+.++|||||.++|....++..++....+..
T Consensus 201 ~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~-~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~ 278 (480)
T 3b3j_A 201 KSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLE-SYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYM 278 (480)
T ss_dssp HHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHH-HHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHH
T ss_pred HHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHH-HHHHHHHhcCCCCEEEEEeceeeeeccCchHHHH
Confidence 9999988899999999998776 7899999998877776665554 4457789999999999999999999988765543
Q ss_pred h---hhcccc--ccccccchhhhhhh----ccCCeEEeeCCCcccCcccceeEeeCCCCCCCCCc-eeeeeEEEEeecce
Q 015306 245 D---KIEFWN--NVYGFDMSCIKKQA----MMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDAS-FTAPFKLVAQRNDY 314 (409)
Q Consensus 245 ~---~~~~w~--~~~g~d~~~~~~~~----~~~p~~~~~~~~~~ls~p~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~g~ 314 (409)
+ ...+|. .++|+++..+.... +..|+++........+.+. ...+||.+...+++. ...+++|.+.++|.
T Consensus 279 e~~~~~~~w~~~~~~g~dl~~l~~~~~~~~f~~pvvd~~~~~~~y~~tl-~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~ 357 (480)
T 3b3j_A 279 EQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSV-KYTVNFLEAKEGDLHRIEIPFKFHMLHSGL 357 (480)
T ss_dssp HHHHHHHHHHSSCBTTBCCGGGHHHHHHHHTTSCEECCCCSTTBCSCCE-EEEEETTTCCTTTTTEEEEEEEEECSSCEE
T ss_pred HHhhccCccccccCCCcChhhhhhHHHHhccCCcEEEEeecccccchhh-hhhhhhhcCChhhhcceeeeEEEEEccCcE
Confidence 2 235663 68899998876654 4567777655444455544 468999998887775 47889999999999
Q ss_pred EeEEEEEEEEEEcCCCceeEeecccccCCCCCCCCceeEEEecCCceecCCCCEEEEEEEEeeCCCCCceeEEEEEEEEc
Q 015306 315 IHALVAYFDVTFTKCHKLMGFSTVYNTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQ 394 (409)
Q Consensus 315 ~~g~~~wf~~~l~~~~~~~~ls~~~~t~p~~~~~~W~q~v~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~ 394 (409)
+|||++||+++|++++.++.|| |+|..+.+||+|++|+|++|+.|++|++|++++++++++.+ +++|+++|.++
T Consensus 358 ~hg~~~wFd~~~~~~~~~v~lS----T~P~~~~thW~q~~~~l~~p~~v~~g~~i~g~~~~~~~~~~--~~~v~~~~~~~ 431 (480)
T 3b3j_A 358 VHGLAFWFDVAFIGSIMTVWLS----TAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQ--SYDISIVAQVD 431 (480)
T ss_dssp EEEEEEEEEEEEECSSCEEESS----SCCSSSCCCSEEEEEEEEEEEEECTTCEEEEEEEEEECTTS--SEEEEEEEEET
T ss_pred EEEEEEEEEEEEcCCCCceEEe----CCCCcCCCeeeeEEEEeCCceEeCCCCEEEEEEEEEECCCC--CcEEEEEEEEc
Confidence 9999999999999766689999 99999999999999999999999999999999999998754 45777777777
Q ss_pred ceee
Q 015306 395 GRHS 398 (409)
Q Consensus 395 ~~~~ 398 (409)
+...
T Consensus 432 ~~~~ 435 (480)
T 3b3j_A 432 QTGS 435 (480)
T ss_dssp TTCC
T ss_pred cCCc
Confidence 7653
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.67 E-value=3.5e-16 Score=145.30 Aligned_cols=107 Identities=18% Similarity=0.285 Sum_probs=91.3
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcC---CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAG---AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g---~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
...++.+|||||||+|.++..+++.. ..+|+|||+|+ |++.|++++...+...+|+++++|+.++++ ++||+|+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~ 144 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVV 144 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccce
Confidence 35789999999999999999999852 34899999999 999999999988888889999999998876 5699999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+..+.+++. ......+++++.++|||||+++..
T Consensus 145 ~~~~l~~~~-~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 145 LNFTLQFLE-PSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeeeeeecC-chhHhHHHHHHHHHcCCCcEEEEE
Confidence 976555443 345568899999999999999854
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.67 E-value=4e-16 Score=145.26 Aligned_cols=107 Identities=20% Similarity=0.308 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...++.++++++.+|+.+++++.++||+|++..
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 3678899999999999999999998777999999999 999999999999998889999999999888778999999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+.+++ .+..+++.+.++|||||+++...
T Consensus 123 ~~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 123 AIYNI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp CGGGT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred Cceec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 54433 46789999999999999998654
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.67 E-value=6.3e-16 Score=142.81 Aligned_cols=108 Identities=18% Similarity=0.282 Sum_probs=95.2
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
....++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...++.++++++++|+.++++++++||+|++.
T Consensus 42 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 121 (257)
T 3f4k_A 42 NELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSE 121 (257)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEec
Confidence 35677889999999999999999997655999999999 99999999999999888999999999988877899999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
.+.+++ .+..++..+.++|||||+++...
T Consensus 122 ~~l~~~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 122 GAIYNI----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCSCCC----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ChHhhc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 654433 46789999999999999998653
No 13
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.66 E-value=5.7e-16 Score=142.92 Aligned_cols=110 Identities=23% Similarity=0.307 Sum_probs=93.1
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
..+.......++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.|+++.. ..+++++.+|+.++++++++|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCe
Confidence 34454555568899999999999999999998877999999999 9999998765 356999999999998877999
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|++..+ +.+..++..+++.+.++|||||.++..
T Consensus 110 D~v~~~~~---l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 110 NVVLSSLA---LHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEESC---GGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEchh---hhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 99999765 333366789999999999999999854
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.66 E-value=1.1e-15 Score=142.43 Aligned_cols=117 Identities=20% Similarity=0.144 Sum_probs=100.0
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
.+.+.+.+.....++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++.+|+.++++++
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 44455555566778999999999999999999985456999999999 99999999999998888999999999988887
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|++..+ +.+..+...++..+.++|||||+++..
T Consensus 128 ~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 128 ASFDAVWALES---LHHMPDRGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp TCEEEEEEESC---TTTSSCHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCccEEEEech---hhhCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 89999999655 444456689999999999999998854
No 15
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=5.9e-16 Score=136.53 Aligned_cols=105 Identities=25% Similarity=0.338 Sum_probs=89.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~~ 197 (409)
.++.+|||+|||+|.+++.+++.|..+|+|+|+|+ +++.|++++..+++ ++++++++|+.++. ++.++||+|++++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 57889999999999999988888888999999999 99999999999988 56999999998874 3358999999986
Q ss_pred ccccccChhHHHHHHHHHHh--cccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDK--WLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~--~LkpgG~lip~ 228 (409)
+.. .....+..++..+.+ +|+|||+++..
T Consensus 122 p~~--~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 122 PYN--VDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp CTT--SCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred CCC--cchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 521 123567788888888 99999999854
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=8.1e-16 Score=141.98 Aligned_cols=115 Identities=16% Similarity=0.127 Sum_probs=96.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
....+.......++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++++|+.++++ ++
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 102 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NE 102 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SS
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CC
Confidence 3344444456778999999999999999999985344999999999 999999999999988789999999999877 58
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+||+|++..+.+ +..++..++.++.++|||||+++..
T Consensus 103 ~fD~V~~~~~~~---~~~~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 103 KCDVAACVGATW---IAGGFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp CEEEEEEESCGG---GTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred CCCEEEECCChH---hcCCHHHHHHHHHHHcCCCeEEEEe
Confidence 999999965433 3345778899999999999998864
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.64 E-value=1e-15 Score=137.41 Aligned_cols=115 Identities=20% Similarity=0.288 Sum_probs=96.5
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
+.+.+.......++ +|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...++.++++++++|+.+++++++
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 110 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDN 110 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTT
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcc
Confidence 34444444444455 9999999999999999997555999999999 999999999999988789999999999888888
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+||+|++..+.+ +..++..++..+.++|||||.++..
T Consensus 111 ~~D~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 111 YADLIVSRGSVF---FWEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp CEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccEEEECchHh---hccCHHHHHHHHHHhCCCCCEEEEE
Confidence 999999976533 3366788999999999999998853
No 18
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.64 E-value=3.4e-15 Score=141.58 Aligned_cols=115 Identities=18% Similarity=0.080 Sum_probs=97.5
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
..+.+.......++.+|||||||+|.++..+++. | .+|+|+|+|+ +++.|++++...++.++++++.+|+.++ +
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C
Confidence 3444555566788999999999999999999996 7 5999999999 9999999999999988899999999887 4
Q ss_pred CceeEEEEecccccccC------hhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEWMGYFLLF------ENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|++..+.+++.. ......++..+.++|||||+++..
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 89999999766544422 256689999999999999999854
No 19
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.63 E-value=1.7e-15 Score=136.44 Aligned_cols=107 Identities=13% Similarity=0.111 Sum_probs=90.6
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCC----cEEEEEcccccccCCCCceeEE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSN----VITVLKGKIEEIELPVTKVDII 193 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~~~~DvV 193 (409)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..+++.+ +++++++|+...+.+.++||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 4577899999999999999999964 46999999999 9999999998887764 7999999998776666899999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++..+.+++ .......+++.+.++|||||.++.
T Consensus 107 ~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~ 139 (217)
T 3jwh_A 107 TVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVT 139 (217)
T ss_dssp EEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred eeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEE
Confidence 997665544 334568899999999999998774
No 20
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.63 E-value=1.4e-15 Score=140.87 Aligned_cols=105 Identities=19% Similarity=0.233 Sum_probs=91.0
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
...++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++...+++ +++++.+|++++++++++||+|++..
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDERFHIVTCRI 111 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCCEEEEEEhh
Confidence 456889999999999999999999865 999999999 999999999988876 49999999999988888999999975
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+ +.+..++..++.++.++|||||+++..
T Consensus 112 ~---l~~~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 112 A---AHHFPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp C---GGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred h---hHhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 5 334356789999999999999998853
No 21
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.63 E-value=7.4e-16 Score=142.39 Aligned_cols=104 Identities=17% Similarity=-0.032 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH----------cC------CCCcEEEEEcccccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA----------NG------FSNVITVLKGKIEEI 183 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~----------~~------~~~~i~~~~~d~~~~ 183 (409)
.++.+|||+|||+|..+..+++.|. +|+|||+|+ +++.|++.... .+ ...+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5778999999999999999999987 999999999 99999776531 00 124699999999998
Q ss_pred cCCC-CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 184 ELPV-TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 184 ~~~~-~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
+++. ++||+|++..+..++ .......++..+.++|||||+++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEE
Confidence 8753 799999987554444 34567789999999999999986
No 22
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=2.9e-15 Score=131.40 Aligned_cols=107 Identities=17% Similarity=0.163 Sum_probs=87.1
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CCCCceeEEEEe
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIIISE 196 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~DvVvs~ 196 (409)
...++.+|||+|||+|.++..+++. ..+|+|+|+|+ +++.|++++..+++ +++++++.+...+. +.+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4568899999999999999999998 56999999999 99999999999988 56999998888754 335789999987
Q ss_pred ccccccc-------ChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLL-------FENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~-------~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+ +++.. .......++..+.++|||||+++..
T Consensus 97 ~-~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 97 L-GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp E-C-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 4 22221 2345567789999999999998853
No 23
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.63 E-value=1.2e-15 Score=137.31 Aligned_cols=114 Identities=14% Similarity=0.068 Sum_probs=95.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
.+...+.......++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++...+ +++++++|+.+++ +.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-CS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-CC
Confidence 4445555455667788999999999999999999865 999999999 9999999876543 5999999999987 45
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++||+|++..+.+++.....+..++..+.++|||||.++.
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 8999999987666665555667889999999999999985
No 24
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.63 E-value=4.5e-16 Score=139.14 Aligned_cols=106 Identities=12% Similarity=-0.028 Sum_probs=85.5
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC-----------CCCcEEEEEcccccccCC
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG-----------FSNVITVLKGKIEEIELP 186 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~-----------~~~~i~~~~~d~~~~~~~ 186 (409)
...++.+|||+|||+|..+..+++.|. +|+|||+|+ |++.|+++..... ...+++++++|+.+++++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 346788999999999999999999976 999999999 9999998764210 124599999999998865
Q ss_pred C-CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 187 V-TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 187 ~-~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
+ ++||+|++..+.+++ .......+++++.++|||||+++
T Consensus 98 ~~~~fD~v~~~~~l~~l-~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIAL-PADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp HHHSEEEEEEESCGGGS-CHHHHHHHHHHHHHHSCSEEEEE
T ss_pred cCCCEEEEEECcchhhC-CHHHHHHHHHHHHHHcCCCcEEE
Confidence 4 789999987544433 34556788999999999999843
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.63 E-value=3.5e-15 Score=142.25 Aligned_cols=112 Identities=12% Similarity=0.124 Sum_probs=96.1
Q ss_pred HHHHhccC-CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCc
Q 015306 112 NVIYQNKF-LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (409)
Q Consensus 112 ~~l~~~~~-~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (409)
+.+..... ..++.+|||||||+|.++..+++....+|+|+|+++ +++.|++++..+++.++++++.+|+.++++++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 34444444 678899999999999999999996234999999999 9999999999999988899999999998887789
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
||+|++..+.+++ .+..++..+.++|||||+++.
T Consensus 186 fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 186 VTASWNNESTMYV----DLHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred EeEEEECCchhhC----CHHHHHHHHHHHcCCCcEEEE
Confidence 9999997654433 278999999999999999885
No 26
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.62 E-value=1e-15 Score=144.27 Aligned_cols=124 Identities=19% Similarity=0.115 Sum_probs=98.1
Q ss_pred hHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC---CcEEEEEcc
Q 015306 104 VVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS---NVITVLKGK 179 (409)
Q Consensus 104 ~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~---~~i~~~~~d 179 (409)
..+...+.+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++....+.. .++.+..+|
T Consensus 39 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred cchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 344556666666655556889999999999999999999977 999999999 999999887544322 358899999
Q ss_pred ccccc---CCCCceeEEEEe-cccccccC----hhHHHHHHHHHHhcccCCeEEEcc
Q 015306 180 IEEIE---LPVTKVDIIISE-WMGYFLLF----ENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 180 ~~~~~---~~~~~~DvVvs~-~~~~~l~~----~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+++ ++.++||+|++. .+..++.. ...+..+++.+.++|||||+++..
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99887 677899999995 34333433 345889999999999999999853
No 27
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.62 E-value=3e-15 Score=141.14 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=94.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-CCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-PVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.|++++...++..+++++++|+.+.++ +.++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 468899999999999999999998877999999999 999999999988887789999999999877 468999999975
Q ss_pred cccc-ccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYF-LLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~-l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.++ +.+...+..++..+.++|||||.++..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4333 245677889999999999999998853
No 28
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=2.7e-15 Score=141.73 Aligned_cols=106 Identities=21% Similarity=0.201 Sum_probs=93.7
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
...++.+|||||||+|.++..+++. |. +|+|+|+|+ +++.|++++...++.++++++.+|+.++++++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 5678899999999999999999985 65 999999999 99999999999898888999999999998887899999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+.+ +...+..++.++.++|||||+++..
T Consensus 158 ~~l~---~~~~~~~~l~~~~~~LkpgG~l~~~ 186 (297)
T 2o57_A 158 DAFL---HSPDKLKVFQECARVLKPRGVMAIT 186 (297)
T ss_dssp SCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhh---hcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5533 3345789999999999999999854
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.62 E-value=2.5e-15 Score=135.52 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=89.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCC----cEEEEEcccccccCCCCceeEE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSN----VITVLKGKIEEIELPVTKVDII 193 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~~~~DvV 193 (409)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..+++.+ +++++.+|+...+.+.++||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 27 SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEE
Confidence 3577899999999999999999965 46999999999 9999999998877764 7999999998777666899999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++..+.+++ ....+..+++.+.++|||||.++.
T Consensus 107 ~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 107 TVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp EEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred EEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEE
Confidence 997654444 233557899999999999997763
No 30
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.61 E-value=2.2e-15 Score=131.26 Aligned_cols=105 Identities=20% Similarity=0.245 Sum_probs=87.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~DvVvs~~ 197 (409)
..++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++..+++.++++++.+|+.+. +...++||+|++++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 467889999999999999999998878999999999 9999999999998877899999999884 33336799999986
Q ss_pred ccccccChhHHHHHHHHHH--hcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARD--KWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~--~~LkpgG~lip~ 228 (409)
. + +......++..+. ++|+|||+++..
T Consensus 109 ~-~---~~~~~~~~~~~l~~~~~L~~gG~l~~~ 137 (177)
T 2esr_A 109 P-Y---AKETIVATIEALAAKNLLSEQVMVVCE 137 (177)
T ss_dssp S-S---HHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred C-C---CcchHHHHHHHHHhCCCcCCCcEEEEE
Confidence 4 2 1234556666665 999999998853
No 31
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=3.6e-15 Score=138.37 Aligned_cols=110 Identities=21% Similarity=0.321 Sum_probs=91.5
Q ss_pred cCCC-CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEE
Q 015306 118 KFLF-KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDII 193 (409)
Q Consensus 118 ~~~~-~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvV 193 (409)
.... ++.+|||+|||+|.+++.+++.+..+|+|+|+++ +++.|++++..+++.++++++++|+.++. ++.++||+|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~I 123 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIV 123 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEE
Confidence 4455 7899999999999999999998766999999999 99999999999999888999999999876 446899999
Q ss_pred EEecccccc-----cC------------hhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFL-----LF------------ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l-----~~------------~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+++++.+.. .. ...+..++..+.++|||||+++.
T Consensus 124 i~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 124 TCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp EECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 998743221 00 12456789999999999999884
No 32
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.61 E-value=1.7e-15 Score=135.20 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=86.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcccccccC--CCCc-eeEEEEe
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEIEL--PVTK-VDIIISE 196 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~--~~~~-~DvVvs~ 196 (409)
++.+|||+|||+|.+++.++..|+.+|+|+|+|+ +++.|++++..+++. ++++++++|+.++.. +.++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 6789999999999999998888878999999999 999999999999984 569999999988643 2478 9999998
Q ss_pred cccccccChhHHHHHHHHH--HhcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYAR--DKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~--~~~LkpgG~lip~ 228 (409)
+. +. ......++..+ .++|+|||.++..
T Consensus 133 ~~-~~---~~~~~~~l~~~~~~~~LkpgG~l~i~ 162 (201)
T 2ift_A 133 PP-FH---FNLAEQAISLLCENNWLKPNALIYVE 162 (201)
T ss_dssp CC-SS---SCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CC-CC---CccHHHHHHHHHhcCccCCCcEEEEE
Confidence 75 22 35667778777 6789999998854
No 33
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.60 E-value=1.7e-14 Score=132.78 Aligned_cols=113 Identities=22% Similarity=0.331 Sum_probs=91.6
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
..+.......++.+|||+|||+|.++..+++.|. +|+|+|+|+ +++.|++++...+. +++++++|+.+++++ ++|
T Consensus 31 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 31 EEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC-SCE
T ss_pred HHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC-CCc
Confidence 3333333445778999999999999999999866 999999999 99999999988775 499999999998766 789
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|++............+..++..+.++|+|||.++..
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 99998532222334567789999999999999998854
No 34
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.60 E-value=1.1e-14 Score=130.15 Aligned_cols=103 Identities=12% Similarity=0.148 Sum_probs=87.4
Q ss_pred ccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEE
Q 015306 117 NKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs 195 (409)
.....++.+|||||||+|.++..+++. ..+|+|+|+++ +++.|++++..+++.++++++.+|+.+.....++||+|++
T Consensus 50 ~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~ 128 (204)
T 3njr_A 50 ALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFI 128 (204)
T ss_dssp HHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEE
T ss_pred hcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEE
Confidence 345678899999999999999999998 55999999999 9999999999999986799999999884333368999998
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
... + ..+ ++..+.++|||||+++..
T Consensus 129 ~~~---~----~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 129 GGG---G----SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp CSC---C----CHH-HHHHHHHHSCTTCEEEEE
T ss_pred CCc---c----cHH-HHHHHHHhcCCCcEEEEE
Confidence 541 2 344 889999999999999854
No 35
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.59 E-value=1.7e-15 Score=135.73 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=93.0
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
.+...+... ..++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.|+++... . .+++++.+|+.++++++
T Consensus 31 ~~~~~l~~~--~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~d~~~~~~~~ 105 (215)
T 2pxx_A 31 SFRALLEPE--LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--V-PQLRWETMDVRKLDFPS 105 (215)
T ss_dssp HHHHHHGGG--CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--C-TTCEEEECCTTSCCSCS
T ss_pred HHHHHHHHh--cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEcchhcCCCCC
Confidence 355555543 367889999999999999999998776999999999 99999988753 2 45999999999988777
Q ss_pred CceeEEEEeccccccc------------ChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEWMGYFLL------------FENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~------------~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|++..+..++. +......++..+.++|||||.++..
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEE
Confidence 8999999976543332 2346688999999999999998853
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.59 E-value=8e-15 Score=137.75 Aligned_cols=103 Identities=25% Similarity=0.263 Sum_probs=89.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CCCCceeEEEEeccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIIISEWMG 199 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~DvVvs~~~~ 199 (409)
++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++++...++..+++++.+|+.+++ +++++||+|++..+.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 468999999999999999999865 999999999 99999999999888778999999999987 566899999997653
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+ +..++..++..+.++|||||+++..
T Consensus 147 ~---~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 147 E---WVADPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp G---GCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred h---cccCHHHHHHHHHHHcCCCeEEEEE
Confidence 3 3356788999999999999999853
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.59 E-value=5.5e-15 Score=135.34 Aligned_cols=106 Identities=21% Similarity=0.292 Sum_probs=92.2
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
....++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++...++. +++++.+|++++++++++||+|++.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~ 94 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFDIITCR 94 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEEEEEEE
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEEEEEEC
Confidence 4467889999999999999999999865 999999999 999999999888875 4999999999988877899999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+. .+..++..++..+.++|||||+++..
T Consensus 95 ~~l---~~~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 95 YAA---HHFSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp SCG---GGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred Cch---hhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 543 33356788999999999999998853
No 38
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=1.8e-14 Score=127.48 Aligned_cols=105 Identities=20% Similarity=0.237 Sum_probs=90.0
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
...++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++++..+++++ ++++.+|+.++++ .++||+|++..
T Consensus 29 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~-~~~~D~v~~~~ 105 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTF-DRQYDFILSTV 105 (199)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCC-CCCEEEEEEES
T ss_pred hccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCC-CCCceEEEEcc
Confidence 345778999999999999999999865 999999999 9999999998888754 9999999999877 58999999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.+++. ......++..+.++|||||.++.
T Consensus 106 ~l~~~~-~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 106 VLMFLE-AKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp CGGGSC-GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhCC-HHHHHHHHHHHHHhcCCCeEEEE
Confidence 544442 34678899999999999999763
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.59 E-value=8.1e-15 Score=136.92 Aligned_cols=116 Identities=18% Similarity=0.231 Sum_probs=98.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (409)
.+...+.......++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++...+++ +++++.+|+.+++++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFE 102 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCC
Confidence 445555555666789999999999999999999964 56999999999 999999999998886 499999999999888
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++||+|++..+.+ +..++..++..+.++|||||+++..
T Consensus 103 ~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 103 DSSFDHIFVCFVLE---HLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp TTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEEechhh---hcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 89999999976533 3356678999999999999998854
No 40
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.59 E-value=8.6e-15 Score=134.82 Aligned_cols=115 Identities=18% Similarity=0.189 Sum_probs=94.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
+...+.......++.+|||||||+|.++..+++.+..+|+++|+|+ +++.|++++... .+++++++|+.+++++.+
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~ 157 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPN 157 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSS
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCC
Confidence 3344444455667899999999999999999997777899999999 999999987654 469999999999888778
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+||+|++..+.+++. ...+..++..+.++|||||+++..
T Consensus 158 ~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLT-DADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp CEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEEEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 999999976544332 256789999999999999998864
No 41
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=4.3e-15 Score=135.74 Aligned_cols=108 Identities=19% Similarity=0.211 Sum_probs=88.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc--cCCCCceeEEEEe
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISE 196 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~DvVvs~ 196 (409)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++....+ .+++++++|+.++ ++++++||+|+++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 357889999999999999999887666999999999 9999999887766 4699999999998 7777899999993
Q ss_pred -ccc-ccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 197 -WMG-YFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 197 -~~~-~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
... ....+......++.++.++|||||+++...
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 211 112233455678999999999999998543
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.59 E-value=3.5e-15 Score=141.79 Aligned_cols=120 Identities=11% Similarity=0.101 Sum_probs=99.5
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHH--HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCA--KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la--~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (409)
...+.+.+. ....++.+|||||||+|.++..++ ..+..+|+|+|+|+ +++.|++++...++.++++++++|+.++
T Consensus 105 ~~~~~~~l~--~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 182 (305)
T 3ocj_A 105 HGHFRRALQ--RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL 182 (305)
T ss_dssp HHHHHHHHH--HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC
T ss_pred HHHHHHHHH--hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC
Confidence 333555553 345788999999999999999985 35566999999999 9999999999999888899999999999
Q ss_pred cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 184 ~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+++ ++||+|++..+.+++........++..+.++|||||+++...
T Consensus 183 ~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 183 DTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp CCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred Ccc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 887 999999997665555555555568999999999999998643
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.59 E-value=2e-14 Score=135.16 Aligned_cols=115 Identities=21% Similarity=0.189 Sum_probs=95.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (409)
...+.+.......++.+|||||||+|.++..+++ .|. +|+|+|+|+ +++.|++++...++.++++++.+|+.+++
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--
Confidence 3445555556677889999999999999999995 666 999999999 99999999998888778999999998764
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|++..+.+++. ...+..++..+.++|||||.++..
T Consensus 128 -~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFG-HERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp -CCCSEEEEESCGGGTC-TTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred -CCeeEEEEeCchhhcC-hHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8899999976543332 156788999999999999999854
No 44
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.59 E-value=5.6e-15 Score=133.02 Aligned_cols=107 Identities=25% Similarity=0.230 Sum_probs=92.6
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAG--AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
....++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|++++...+++ +++++.+|+.++++++++||+|+
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIF 111 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEE
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEE
Confidence 345778899999999999999999964 46999999999 999999999988886 59999999999888878999999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+..+.+ +..+...+++.+.++|||||.++..
T Consensus 112 ~~~~l~---~~~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 112 MAFTFH---ELSEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp EESCGG---GCSSHHHHHHHHHHHEEEEEEEEEE
T ss_pred eehhhh---hcCCHHHHHHHHHHHhCCCeEEEEE
Confidence 976533 3356788999999999999998853
No 45
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=1.1e-14 Score=129.00 Aligned_cols=109 Identities=15% Similarity=0.163 Sum_probs=90.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CCCCceeEEE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIII 194 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~DvVv 194 (409)
...++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.|++++..+++.++++++++|+.++. ..+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3567899999999999999999995 456999999999 99999999999998778999999998875 4458999999
Q ss_pred Eeccc------ccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 195 SEWMG------YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 195 s~~~~------~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+++.. ...........++..+.++|||||+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 97521 0122233556789999999999999884
No 46
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.58 E-value=3.8e-15 Score=136.31 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=89.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~~ 197 (409)
.+|.+|||||||+|..+..+++.+..+|++||+|+ +++.|+++....+. ++.++.+|+.++. +++++||.|+.+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEEee
Confidence 67899999999999999999987656999999999 99999999887664 5899999988763 5678999999864
Q ss_pred c--cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 M--GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~--~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+ ...+.+..+.+.+++++.|+|||||++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 3 234456667889999999999999999854
No 47
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=1.9e-14 Score=128.41 Aligned_cols=109 Identities=19% Similarity=0.252 Sum_probs=90.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
.+.......++.+|||+|||+|.++..+++.+ ..+|+++|+|+ +++.|++++..+++ ++++++.+|+.+.....++|
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCCC
T ss_pred HHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCCC
Confidence 34444566788999999999999999999975 57999999999 99999999999888 56999999997654444789
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|++.... ..+..++..+.++|||||+++..
T Consensus 110 D~i~~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 110 DRVFIGGSG------GMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp SEEEESCCT------TCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CEEEECCCC------cCHHHHHHHHHHhcCCCeEEEEE
Confidence 999986532 25678899999999999999853
No 48
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.6e-14 Score=136.71 Aligned_cols=113 Identities=18% Similarity=0.212 Sum_probs=93.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH--cCCCEEEEEecHH-HHHHHHHHHHHc-CCCCcEEEEEcccccccC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK--AGAAHVYAVECSQ-MANMAKQIVEAN-GFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~--~g~~~V~~vD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~ 185 (409)
+.+.|.... ..++.+|||||||+|.++..+++ .+..+|+|+|+|+ +++.|++++... +...+++++++|++++++
T Consensus 25 ~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~ 103 (299)
T 3g5t_A 25 FYKMIDEYH-DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKF 103 (299)
T ss_dssp HHHHHHHHC-CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGG
T ss_pred HHHHHHHHh-cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCc
Confidence 334444322 35789999999999999999997 3577999999999 999999999887 445679999999999887
Q ss_pred CC------CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PV------TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~------~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+. ++||+|++..+.+++ ++..++..+.++|||||.++.
T Consensus 104 ~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 104 LGADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GCTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 76 799999997654433 678999999999999999885
No 49
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.58 E-value=2.8e-14 Score=128.95 Aligned_cols=116 Identities=18% Similarity=0.198 Sum_probs=95.4
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (409)
.+.+.+.+.... .++.+|||||||+|.++..+++.+. +|+++|+|+ +++.|+++...++ .+++++.+|+.++++
T Consensus 25 ~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~ 99 (227)
T 1ve3_A 25 IETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSF 99 (227)
T ss_dssp HHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCS
T ss_pred HHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCC
Confidence 445555565433 4588999999999999999999866 999999999 9999999998876 459999999999887
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.++||+|++..+.. +.+...+..++..+.++|+|||.++..
T Consensus 100 ~~~~~D~v~~~~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 100 EDKTFDYVIFIDSIV-HFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp CTTCEEEEEEESCGG-GCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcEEEEEEcCchH-hCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 778999999976422 344567788999999999999998743
No 50
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.58 E-value=7.8e-15 Score=134.15 Aligned_cols=103 Identities=20% Similarity=0.245 Sum_probs=89.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec-c
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW-M 198 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~-~ 198 (409)
.++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++....+. +++++++|+.+++++ ++||+|++.. +
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~ 111 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDS 111 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCcc
Confidence 3778999999999999999999865 899999999 99999999988765 589999999998877 8999999965 5
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+++.....+..++..+.++|||||.++.
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 44454446788999999999999999885
No 51
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.58 E-value=6.9e-15 Score=136.22 Aligned_cols=115 Identities=26% Similarity=0.297 Sum_probs=94.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
..+.+.......++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++.... .+++++.+|+.+++++++
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~ 119 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPEN 119 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTT
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCC
Confidence 3445555566778899999999999999999995344999999999 999999876544 469999999999988779
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+||+|++..+.+++ ...++..++..+.++|||||.++..
T Consensus 120 ~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 120 NFDLIYSRDAILAL-SLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEeHHHHHHhc-ChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 99999997553333 1267889999999999999999854
No 52
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.57 E-value=2.7e-15 Score=138.93 Aligned_cols=104 Identities=19% Similarity=0.118 Sum_probs=84.1
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
+.+.|.... ..+.+|||||||+|.++..+++.|. +|+|+|+|+ |++.|++. .+++++++++++++++++
T Consensus 29 l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 29 LFRWLGEVA--PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCC
Confidence 334444332 3457999999999999999999865 999999999 99877542 359999999999999989
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+||+|++....+++ ..+.++.++.|+|||||+++.
T Consensus 99 sfD~v~~~~~~h~~----~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 99 SVDVAIAAQAMHWF----DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp CEEEEEECSCCTTC----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccEEEEeeehhHh----hHHHHHHHHHHHcCCCCEEEE
Confidence 99999996543322 467889999999999999874
No 53
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=2e-14 Score=130.83 Aligned_cols=104 Identities=23% Similarity=0.291 Sum_probs=87.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.++..+++.. ..+|+|+|+|+ +++.|++++...+ +++++++|+.+++++ ++||+|++..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-~~fD~v~~~~ 117 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-EKYDMVVSAL 117 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC-SCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC-CCceEEEEeC
Confidence 5678899999999999999999963 56999999999 9999999876554 699999999998887 8999999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+++ .......+++.+.++|||||.++..
T Consensus 118 ~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 118 SIHHL-EDEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccC-CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 54444 2233446899999999999999853
No 54
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=6.6e-15 Score=131.43 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCCCCceeEEEEeccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISEWMG 199 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~DvVvs~~~~ 199 (409)
++.+|||+|||+|.+++.+++.|+.+|+|+|+|+ +++.|++++..+++ ++++++++|+.+. +...++||+|++++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 6789999999999999998888877999999999 99999999999988 5699999999884 444578999999865
Q ss_pred ccccChhHHHHHHHHHHh--cccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDK--WLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~--~LkpgG~lip~ 228 (409)
+. ......++..+.+ +|+|||+++..
T Consensus 132 ~~---~~~~~~~l~~l~~~~~L~pgG~l~i~ 159 (202)
T 2fpo_A 132 FR---RGLLEETINLLEDNGWLADEALIYVE 159 (202)
T ss_dssp SS---TTTHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CC---CCcHHHHHHHHHhcCccCCCcEEEEE
Confidence 22 2455566666654 69999998854
No 55
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.57 E-value=1.2e-15 Score=141.96 Aligned_cols=110 Identities=12% Similarity=0.110 Sum_probs=86.2
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC----------------------------
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF---------------------------- 169 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~---------------------------- 169 (409)
...++.+|||||||+|.++..++..|+.+|+|+|+|+ |++.|++++..+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567889999999999998888888877899999999 99999987755321
Q ss_pred CCcEE-EEEcccccc-cC---CCCceeEEEEecccccc-cChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 170 SNVIT-VLKGKIEEI-EL---PVTKVDIIISEWMGYFL-LFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 170 ~~~i~-~~~~d~~~~-~~---~~~~~DvVvs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+++ ++++|+.+. ++ ..++||+|++..+.+++ .+...+..++..+.++|||||.++..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 11244 899999884 22 24789999998665443 33356778999999999999999865
No 56
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.57 E-value=2.6e-14 Score=132.18 Aligned_cols=116 Identities=21% Similarity=0.249 Sum_probs=93.1
Q ss_pred HHHHHHHHHh-ccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc
Q 015306 107 TKSYQNVIYQ-NKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (409)
Q Consensus 107 ~~~~~~~l~~-~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (409)
...+.+.+.. .....++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++ . +...+++++.+|+.+++
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 23 AGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIP 99 (263)
T ss_dssp HHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCC
Confidence 3344444432 23557789999999999999999999854 999999999 999999987 2 33356999999999988
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++++||+|++..+ +++..+...++..+.++|||||.++..
T Consensus 100 ~~~~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 LPDESVHGVIVVHL---WHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCTTCEEEEEEESC---GGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCeeEEEECCc---hhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 87789999999655 334356788999999999999998854
No 57
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.57 E-value=4.9e-15 Score=135.80 Aligned_cols=99 Identities=20% Similarity=0.205 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC---CCceeEEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---VTKVDIIIS 195 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~DvVvs 195 (409)
.++.+|||||||+|.+++.+++ .+..+|+|+|+|+ +++.|++++..+++.+ ++++++|+.++.++ .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccccccCCccEEEE
Confidence 4678999999999999999997 4556999999999 9999999999999865 99999999988753 478999999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+ ..+..++..+.++|||||.++.
T Consensus 148 ~~~-------~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 148 RAV-------ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp ECC-------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred ecc-------CCHHHHHHHHHHhcCCCCEEEE
Confidence 653 3577899999999999999875
No 58
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.57 E-value=3.2e-14 Score=132.95 Aligned_cols=102 Identities=14% Similarity=0.256 Sum_probs=86.6
Q ss_pred cCCCCCCEEEEEcCCCChHH-HHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILS-LFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~-~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs 195 (409)
..+.++.+|||||||+|.++ +.+++....+|+|+|+|+ +++.|++++...++ ++++++++|+.+++ +++||+|++
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEE
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEE
Confidence 56789999999999998654 667774455999999999 99999999999898 78999999999875 589999997
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
... ......+++++.++|||||+++..
T Consensus 195 ~a~------~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 195 AAL------AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CTT------CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCC------ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 532 256778999999999999999853
No 59
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.57 E-value=1.7e-14 Score=131.00 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=92.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEcccccccCCCCceeEEE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
..++.+|||||||+|.++..+++.|. +|+|+|+++ +++.|++++...++ .++++++.+|+.+++++.++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 35788999999999999999999866 999999999 99999999887776 2468999999999888778999999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+..+.+++........+++.+.++|||||.++..
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9766555544445558999999999999998853
No 60
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=8.4e-15 Score=128.35 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=86.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----CCCceeEEE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVDIII 194 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~DvVv 194 (409)
..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++.++++++++|+.+... ..++||+|+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 357889999999999999999998878999999999 999999999999887789999999988432 247899999
Q ss_pred EecccccccChhHHHHHHHHH--HhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFENMLNTVLYAR--DKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~--~~~LkpgG~lip~ 228 (409)
++++ +.. .....++..+ .++|+|||+++..
T Consensus 122 ~~~~-~~~---~~~~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 122 LDPP-YAK---QEIVSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp ECCC-GGG---CCHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred ECCC-CCc---hhHHHHHHHHHHhcccCCCCEEEEE
Confidence 9865 221 2344555555 7899999998853
No 61
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.56 E-value=1.2e-14 Score=132.89 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=89.8
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
+.......++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.|+++... .+++++.+|+.+++++.++||+
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceE
Confidence 333345568899999999999999999998776999999999 99999887543 3599999999998877789999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|++..+ +.+...+..+++.+.++|+|||.++..
T Consensus 111 v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 111 AYSSLA---LHYVEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp EEEESC---GGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecc---ccccchHHHHHHHHHHhcCcCcEEEEE
Confidence 999654 333356789999999999999998854
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.56 E-value=4.4e-14 Score=134.83 Aligned_cols=115 Identities=16% Similarity=0.090 Sum_probs=96.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (409)
...+.+.......++.+|||||||+|.++..+++. |. +|+|+|+|+ +++.|++++...++.++++++.+|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--
Confidence 34455555566778899999999999999999986 66 999999999 99999999999888888999999998874
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|++..+.+++. ...+..++..+.++|||||.++..
T Consensus 154 -~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFG-HENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp -CCCSEEEEESCGGGTC-GGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred -CCcCEEEEeChHHhcC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 7899999976533332 256789999999999999999853
No 63
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=6.3e-15 Score=138.21 Aligned_cols=101 Identities=20% Similarity=0.152 Sum_probs=88.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||+|||+|.+++.+++.|+.+|+|+|+|+ +++.|++++..+++.++++++++|+.++.. .++||+|+++++
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 357899999999999999999998876899999999 999999999999998889999999999876 589999999764
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
. ....++..+.++|||||+++..
T Consensus 202 ~-------~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 202 V-------RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp S-------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred h-------hHHHHHHHHHHHCCCCeEEEEE
Confidence 2 1245677788999999999853
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.56 E-value=7.7e-15 Score=138.63 Aligned_cols=108 Identities=18% Similarity=0.259 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCC----------------------------
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFS---------------------------- 170 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~---------------------------- 170 (409)
.++++|||||||+|.+++.+++. +..+|+|+|+|+ +++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 47899999999999999999994 667999999999 999999987654422
Q ss_pred -----------------------------CcEEEEEccccccc-----CCCCceeEEEEeccccccc---ChhHHHHHHH
Q 015306 171 -----------------------------NVITVLKGKIEEIE-----LPVTKVDIIISEWMGYFLL---FENMLNTVLY 213 (409)
Q Consensus 171 -----------------------------~~i~~~~~d~~~~~-----~~~~~~DvVvs~~~~~~l~---~~~~~~~~l~ 213 (409)
++|+++++|+.... +..++||+|+|..+..+++ ....+..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 57999999998654 3468999999976543333 4457789999
Q ss_pred HHHhcccCCeEEEcc
Q 015306 214 ARDKWLVDDGIVLPD 228 (409)
Q Consensus 214 ~~~~~LkpgG~lip~ 228 (409)
.+.++|+|||+++..
T Consensus 205 ~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 205 RIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHhCCCcEEEEe
Confidence 999999999999853
No 65
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.56 E-value=2.4e-14 Score=134.52 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=89.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+ +++.|++++..+++ +++++.+|+.++.+ .++||+|++..+.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVF 194 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccch
Confidence 4788999999999999999999977 999999999 99999999999887 59999999999877 5899999998765
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+++ .......++..+.++|+|||.++.
T Consensus 195 ~~~-~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 195 MFL-NRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp GGS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred hhC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 544 345677899999999999999763
No 66
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=1.7e-14 Score=133.07 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC---CCceeEEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---VTKVDIIIS 195 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~DvVvs 195 (409)
.++.+|||||||+|.+++.++.. +..+|+++|+|+ +++.|++++..+++.+ ++++++|++++... .++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEEEE
Confidence 56789999999999999999984 677999999999 9999999999999976 99999999998643 378999999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+ ..+..++..+.++|||||+++.
T Consensus 158 ~a~-------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 158 RAV-------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp ESS-------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCc-------CCHHHHHHHHHHHcCCCeEEEE
Confidence 754 3457889999999999999874
No 67
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.56 E-value=2.9e-14 Score=130.26 Aligned_cols=113 Identities=23% Similarity=0.312 Sum_probs=93.2
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (409)
..+.+.+... ..++.+|||||||+|.++..+++. .+|+|+|+|+ +++.|+++....+ .+++++.+|+.+++++
T Consensus 21 ~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~ 94 (243)
T 3d2l_A 21 PEWVAWVLEQ--VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP 94 (243)
T ss_dssp HHHHHHHHHH--SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS
T ss_pred HHHHHHHHHH--cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC
Confidence 3455555543 356789999999999999999887 6999999999 9999999988776 3589999999998776
Q ss_pred CCceeEEEEec-ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 VTKVDIIISEW-MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 ~~~~DvVvs~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++||+|++.. +.+++.....+..+++.+.++|||||.++.
T Consensus 95 -~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 95 -EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp -SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 8999999864 444454556788899999999999999885
No 68
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.55 E-value=8.1e-15 Score=133.99 Aligned_cols=101 Identities=21% Similarity=0.253 Sum_probs=86.6
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||||||+|.++..+++.|. +|+|+|+++ +++.|+++. ...+++++.+|+.++++++++||+|++..+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 125 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINS 125 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcCh
Confidence 35788999999999999999999866 999999999 999998764 225699999999999887799999999654
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+..++..++..+.++|+|||+++..
T Consensus 126 ---l~~~~~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 126 ---LEWTEEPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp ---TTSSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---HhhccCHHHHHHHHHHHhCCCeEEEEE
Confidence 444467788999999999999998854
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.55 E-value=1.1e-14 Score=137.91 Aligned_cols=105 Identities=18% Similarity=0.164 Sum_probs=86.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC--CcEEEEEcccccccCCCCceeEEEEecc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS--NVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++++...++. .+++++++|+.+++++ ++||+|++...
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD-KRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS-CCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC-CCcCEEEECCc
Confidence 344999999999999999999865 899999999 999999999876642 5699999999998874 89999997422
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
............+++.+.++|||||+++..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 222333446789999999999999999853
No 70
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.55 E-value=5.4e-14 Score=123.48 Aligned_cols=111 Identities=21% Similarity=0.277 Sum_probs=91.2
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcccccccCCCCcee
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIELPVTKVD 191 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D 191 (409)
+.......++.+|||+|||+|.++..+++. ..+|+|+|+++ +++.|++++..+++.+ +++++.+|+.+. ++.++||
T Consensus 44 l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D 121 (194)
T 1dus_A 44 LVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VKDRKYN 121 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CTTSCEE
T ss_pred HHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cccCCce
Confidence 333344568889999999999999999998 55999999999 9999999999988865 599999999874 3457899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|+++++.+ ........++..+.++|+|||.++..
T Consensus 122 ~v~~~~~~~--~~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 122 KIITNPPIR--AGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp EEEECCCST--TCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCcc--cchhHHHHHHHHHHHHcCCCCEEEEE
Confidence 999976422 12456778999999999999998843
No 71
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=2.1e-14 Score=139.11 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=90.4
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHH-------HHcCCC-CcEEEEEcccc
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIV-------EANGFS-NVITVLKGKIE 181 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~-------~~~~~~-~~i~~~~~d~~ 181 (409)
..+.....+.++.+|||||||+|.+++.+|. .|+.+|+|||+++ +++.|+++. ..+|+. ++|+|+++|+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 3344445678999999999999999999987 6777899999999 999998764 345653 67999999999
Q ss_pred cccCCC--CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 182 EIELPV--TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 182 ~~~~~~--~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++++++ ..||+|+++.+ ++ .+.+...+.++.+.|||||+||..
T Consensus 243 ~lp~~d~~~~aDVVf~Nn~---~F-~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 243 SEEWRERIANTSVIFVNNF---AF-GPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp SHHHHHHHHTCSEEEECCT---TC-CHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCccccccCCccEEEEccc---cc-CchHHHHHHHHHHcCCCCcEEEEe
Confidence 987643 47999999754 22 356677778889999999999854
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.55 E-value=1.4e-14 Score=137.39 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=82.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-----cEEEEEccc------cccc--CCC
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-----VITVLKGKI------EEIE--LPV 187 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~-----~i~~~~~d~------~~~~--~~~ 187 (409)
++.+|||||||+|..+..+++.+..+|+|+|+|+ |++.|+++....+... .+++.+.|+ .++. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 5789999999999876666676666999999999 9999999887665421 267888888 3332 445
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|+|..+.+++........+++++.++|||||+++..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 79999999755443333335579999999999999999854
No 73
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.55 E-value=2e-14 Score=124.94 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=86.6
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc-ccCCCC
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IELPVT 188 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~ 188 (409)
..+.......++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++..+++.+++ ++.+|..+ ++...+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 33444445678889999999999999999985 466999999999 999999999999987678 88888855 222227
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+||+|++... +.+ ..+++.+.++|||||+++..
T Consensus 94 ~~D~i~~~~~---~~~----~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 94 NPDVIFIGGG---LTA----PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CCSEEEECC----TTC----TTHHHHHHHTCCTTCEEEEE
T ss_pred CCCEEEECCc---ccH----HHHHHHHHHhcCCCCEEEEE
Confidence 8999998643 322 56788889999999998853
No 74
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.55 E-value=1.2e-14 Score=133.06 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=84.0
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++... +++++++|+.++ +++++||+|++..+
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~ 112 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHV 112 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESC
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhH
Confidence 35778999999999999999999866 899999999 99999987542 599999999988 45589999999765
Q ss_pred cccccChhHHHHHHHHHH-hcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARD-KWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~-~~LkpgG~lip~ 228 (409)
+.+..++..+++++. ++|||||+++..
T Consensus 113 ---l~~~~~~~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 113 ---LEHIDDPVALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp ---GGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ---HHhhcCHHHHHHHHHHHhcCCCCEEEEE
Confidence 444456789999999 999999998853
No 75
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.55 E-value=1.6e-14 Score=132.29 Aligned_cols=105 Identities=20% Similarity=0.226 Sum_probs=88.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~ 200 (409)
++.+|||||||+|.++..+++.+..+|+++|+|+ +++.|++++...+ ..+++++.+|+.+++++.++||+|++..+.+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 6889999999999999999987777999999999 9999999987664 2469999999999887767999999976544
Q ss_pred cccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 201 FLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++. ...+..++..+.++|||||+++..
T Consensus 158 ~~~-~~~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 158 HLT-DQHLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp GSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 332 233568999999999999998853
No 76
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.54 E-value=2.4e-14 Score=127.76 Aligned_cols=105 Identities=20% Similarity=0.269 Sum_probs=85.9
Q ss_pred CCCCCEEEEEcCCCChHH-HHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILS-LFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~-~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||+|||+|.++ ..+++.|. +|+|+|+|+ +++.|++++...+ .+++++++|+.++++++++||+|++..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYG 97 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECS
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcC
Confidence 457889999999999874 44455554 999999999 9999999988766 348999999999888778999999965
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+++ ....+..++..+.++|||||.++..
T Consensus 98 ~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 98 TIFHM-RKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHhC-CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 43433 2367889999999999999999854
No 77
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.54 E-value=5e-14 Score=127.53 Aligned_cols=118 Identities=12% Similarity=0.162 Sum_probs=93.8
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEccccc
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEE 182 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~ 182 (409)
...+...+.......++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|++++...++. ++++++.+|+.+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 3345555554443344559999999999999999994 3 56999999999 999999999999998 789999999987
Q ss_pred cc--CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCC
Q 015306 183 IE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 183 ~~--~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
.. ++.++||+|+++.. ......+++.+.++|||||+++....
T Consensus 121 ~l~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVS------PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HGGGSCTTCEEEEEECCC------TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHhcCCCcCeEEEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 63 33589999998642 23456788999999999999997543
No 78
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=1.8e-14 Score=133.84 Aligned_cols=109 Identities=25% Similarity=0.234 Sum_probs=89.3
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHH---cCCCCcEEEEEccccccc-------C
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEA---NGFSNVITVLKGKIEEIE-------L 185 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~---~~~~~~i~~~~~d~~~~~-------~ 185 (409)
....++.+|||+|||+|.+++.+++.. ..+|+|+|+++ +++.|++++.. +++.++++++++|+.+.. +
T Consensus 32 ~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 32 VADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTC
T ss_pred hcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhcc
Confidence 445678899999999999999999964 56999999999 99999999998 888888999999998872 4
Q ss_pred CCCceeEEEEeccccccc----------------ChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLL----------------FENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~----------------~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.++||+|++++. |+.. ....+..+++.+.++|||||+++.
T Consensus 112 ~~~~fD~Vv~nPP-y~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 112 PDEHFHHVIMNPP-YNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp CTTCEEEEEECCC-C---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCcCEEEECCC-CcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999864 2221 112367889999999999999874
No 79
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.53 E-value=5e-14 Score=125.21 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++ +|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++....+. +++++.+|+.+++++.++||+|++...
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~- 103 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIFC- 103 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEECC-
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEhh-
Confidence 456 999999999999999999866 999999999 99999999988776 599999999998877789999998532
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.........++..+.++|||||.++..
T Consensus 104 --~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 104 --HLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp --CCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred --cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 224567889999999999999998853
No 80
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.53 E-value=6.2e-14 Score=127.25 Aligned_cols=107 Identities=24% Similarity=0.238 Sum_probs=86.6
Q ss_pred CCCCCCEEEEEcCC-CChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CCCCceeEEEE
Q 015306 119 FLFKDKVVLDVGAG-TGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIIIS 195 (409)
Q Consensus 119 ~~~~~~~VLDlGcG-~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~DvVvs 195 (409)
...++.+|||+||| +|.++..+++.+..+|+|+|+++ +++.|++++..+++ +++++++|+..+. +++++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEE
Confidence 35688999999999 99999999997455999999999 99999999999988 5999999975442 44589999999
Q ss_pred ecccccc----------------cChhHHHHHHHHHHhcccCCeEEEc
Q 015306 196 EWMGYFL----------------LFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 196 ~~~~~~l----------------~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++..+.. .....+..+++.+.++|||||+++.
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 8642211 1112347889999999999999874
No 81
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.53 E-value=5.9e-14 Score=131.87 Aligned_cols=106 Identities=22% Similarity=0.249 Sum_probs=90.3
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
....++.+|||||||+|.++..+++. + ..+|+|+|+|+ +++.|++++...+. +++++.+|+.+++++ ++||+|+
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~fD~v~ 94 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELN-DKYDIAI 94 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCS-SCEEEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcC-CCeeEEE
Confidence 35578899999999999999999985 3 36999999999 99999999887664 699999999998875 7999999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+..+ +.+..+...++..+.++|||||+++...
T Consensus 95 ~~~~---l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 95 CHAF---LLHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp EESC---GGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCh---hhcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 9765 3344567899999999999999998543
No 82
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.52 E-value=2.8e-14 Score=130.03 Aligned_cols=103 Identities=15% Similarity=0.070 Sum_probs=87.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~ 200 (409)
++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++++...+...+++++.+|+.++... ++||+|++..+.+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT-ELFDLIFDYVFFC 143 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS-SCEEEEEEESSTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCC-CCeeEEEEChhhh
Confidence 445999999999999999988655 899999999 9999999988766667799999999997744 7999999976544
Q ss_pred cccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 201 FLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++. ......++..+.++|||||.++.
T Consensus 144 ~~~-~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 144 AIE-PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp TSC-GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred cCC-HHHHHHHHHHHHHHCCCCcEEEE
Confidence 442 34778999999999999999885
No 83
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.52 E-value=6.5e-14 Score=126.47 Aligned_cols=103 Identities=20% Similarity=0.167 Sum_probs=88.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.+++.+++.| +.+|+|+|+++ +++.|++++..+++.++|+++.+|..+...+.++||+|+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 4678899999999999999999976 66899999999 999999999999999999999999988765534799988644
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+. ..+..++......|+++|.+|.
T Consensus 99 mGg-----~lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 99 MGG-----RLIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp ECH-----HHHHHHHHHTGGGGTTCCEEEE
T ss_pred Cch-----HHHHHHHHHHHHHhCcCCEEEE
Confidence 421 4567888888899999999883
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=3.4e-14 Score=131.79 Aligned_cols=100 Identities=21% Similarity=0.225 Sum_probs=85.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec-c
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW-M 198 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~-~ 198 (409)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++.. +++++++|+.++++ +++||+|++.. +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-~~~fD~v~~~~~~ 120 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-GRRFSAVTCMFSS 120 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-SCCEEEEEECTTG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-cCCcCEEEEcCch
Confidence 4678999999999999999999865 899999999 9999998753 48999999999887 48999999975 5
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..++.....+..++..+.++|||||.++..
T Consensus 121 l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 121 IGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 455544567788999999999999999864
No 85
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.52 E-value=4.8e-14 Score=126.20 Aligned_cols=95 Identities=22% Similarity=0.239 Sum_probs=81.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~ 200 (409)
++.+|||||||+|.++..+ +..+|+|+|+|+ +++.|+++. .+++++++|+.++++++++||+|++..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 104 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTT-- 104 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESC--
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcCh--
Confidence 7889999999999998877 555999999999 999998876 3489999999998887789999999654
Q ss_pred cccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 201 FLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+..++..++..+.++|||||.++..
T Consensus 105 -l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 105 -LEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp -TTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 444457789999999999999998853
No 86
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.51 E-value=2.9e-14 Score=128.46 Aligned_cols=98 Identities=27% Similarity=0.326 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||||||+|.++..+++.+. +|+|+|+++ +++.|++++. .+++++.+|+.+++++ ++||+|++..+.
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l 116 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDTIVSTYAF 116 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSEEEEESCG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEEEEECcch
Confidence 4788999999999999999999865 999999999 9999998764 3589999999999887 999999997654
Q ss_pred ccccChhHHH--HHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLN--TVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~--~~l~~~~~~LkpgG~lip~ 228 (409)
+++ .... .++..+.++|||||.++..
T Consensus 117 ~~~---~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 117 HHL---TDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp GGS---CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred hcC---ChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 433 3443 4899999999999999854
No 87
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.51 E-value=8.7e-14 Score=126.68 Aligned_cols=103 Identities=22% Similarity=0.273 Sum_probs=88.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.+++.+++.| +.+|+|+|+++ +++.|++++..+++.++|+++.+|..+...+..+||+|+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 4678899999999999999999976 66899999999 999999999999999899999999988765534699988644
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++ -..+..++......|+++|++|.
T Consensus 99 mG-----g~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 99 MG-----GTLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp EC-----HHHHHHHHHHTGGGGTTCCEEEE
T ss_pred Cc-----hHHHHHHHHHHHHHhCCCCEEEE
Confidence 42 14567888888899999999883
No 88
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.51 E-value=1.1e-13 Score=124.32 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=86.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEe
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISE 196 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~ 196 (409)
.++.+|||||||+|.++..+++. +..+|+|+|+++ +++.|++++..+++ ++++++++|+.+++ ++.++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 46789999999999999999985 456999999999 99999999999888 46999999999876 666889999997
Q ss_pred ccccccc--Ch---hHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLL--FE---NMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~--~~---~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
....... ++ .....++..+.++|+|||.++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 5422111 00 02357889999999999998753
No 89
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.51 E-value=8.5e-14 Score=124.12 Aligned_cols=108 Identities=28% Similarity=0.341 Sum_probs=90.3
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
...+.+... ..++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++..+++.+ ++++.+|+.+.. .
T Consensus 49 ~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--~ 123 (205)
T 3grz_A 49 LAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV--D 123 (205)
T ss_dssp HHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--C
T ss_pred HHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--C
Confidence 344444432 357889999999999999999998888999999999 9999999999999876 999999997753 4
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++||+|+++.+. ..+..++..+.++|+|||+++.
T Consensus 124 ~~fD~i~~~~~~------~~~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 124 GKFDLIVANILA------EILLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp SCEEEEEEESCH------HHHHHHGGGSGGGEEEEEEEEE
T ss_pred CCceEEEECCcH------HHHHHHHHHHHHhcCCCCEEEE
Confidence 899999997542 2357888999999999999885
No 90
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.51 E-value=9.9e-14 Score=125.05 Aligned_cols=103 Identities=20% Similarity=0.182 Sum_probs=86.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.+++.+++.+ +.+|+|+|+++ +++.|++++..+++.++|+++.+|..+...+..+||+|+...
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 4678899999999999999999976 66899999999 999999999999999899999999965432223799988654
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++ -..+..++......|+++|++|.
T Consensus 93 ~G-----g~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 93 MG-----GRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp EC-----HHHHHHHHHHTGGGCTTCCEEEE
T ss_pred CC-----hHHHHHHHHHHHHHhCCCCEEEE
Confidence 32 13467889999999999999883
No 91
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.51 E-value=1.1e-13 Score=124.17 Aligned_cols=101 Identities=15% Similarity=0.124 Sum_probs=84.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++ .+. .+++++++|+.++ ++.++||+|++..+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHW 116 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEech
Confidence 56778999999999999999999865 999999999 9999987 444 3599999999988 66689999999765
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+++. ......+++.+.++|||||.++..
T Consensus 117 l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 117 LAHVP-DDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 44442 233578999999999999998854
No 92
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.51 E-value=3.3e-14 Score=132.46 Aligned_cols=99 Identities=20% Similarity=0.165 Sum_probs=86.0
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..+|.+|||+|||+|.+++.+|+.|+++|+|+|+|+ +++.+++++..|++.++++++++|+.++... +.||.|+++++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~-~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE-NIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC-SCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc-cCCCEEEECCC
Confidence 468999999999999999999999988999999999 9999999999999999999999999987654 88999998765
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
... ..++..+.++||+||++.
T Consensus 202 ~~~-------~~~l~~a~~~lk~gG~ih 222 (278)
T 3k6r_A 202 VRT-------HEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp SSG-------GGGHHHHHHHEEEEEEEE
T ss_pred CcH-------HHHHHHHHHHcCCCCEEE
Confidence 322 234555668899999875
No 93
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.51 E-value=6.6e-14 Score=126.45 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-c--CCCCceeEEEEe
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E--LPVTKVDIIISE 196 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~~DvVvs~ 196 (409)
++.+|||||||+|.++..+|+. +...|+|||+|+ +++.|++++..+++.+ ++++++|+.++ + +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcCCCChheEEEe
Confidence 6779999999999999999984 456899999999 9999999999999865 99999999885 3 567899999986
Q ss_pred cccccccChhH------HHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLLFENM------LNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~------~~~~l~~~~~~LkpgG~lip~ 228 (409)
...... .... .+.++..+.++|||||+++..
T Consensus 113 ~~~p~~-~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 113 FPDPWH-KARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp SCCCCC-SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcc-chhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 322211 1111 135899999999999998853
No 94
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.50 E-value=1.1e-13 Score=128.09 Aligned_cols=110 Identities=23% Similarity=0.366 Sum_probs=91.1
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (409)
+..+.+++... ..++.+|||+|||+|.+++.+++.|+ +|+|+|+++ +++.|++++..+++. ++++.+|+.+. +
T Consensus 107 t~~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~ 180 (254)
T 2nxc_A 107 TRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-L 180 (254)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-G
T ss_pred HHHHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-C
Confidence 34455555543 46789999999999999999999888 999999999 999999999999885 89999999874 3
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.++||+|+++.+. ..+..++..+.++|||||+++..
T Consensus 181 ~~~~fD~Vv~n~~~------~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 181 PFGPFDLLVANLYA------ELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp GGCCEEEEEEECCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCCEEEECCcH------HHHHHHHHHHHHHcCCCCEEEEE
Confidence 44789999997532 24568889999999999998853
No 95
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.50 E-value=5.9e-14 Score=134.71 Aligned_cols=106 Identities=23% Similarity=0.146 Sum_probs=88.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcccccccCC----CCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIELP----VTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~----~~~~DvVv 194 (409)
.++.+|||+|||+|.+++.+++.|+ +|++||+|+ +++.|++++..+++.+ +++++++|+.++... .++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999999999888 999999999 9999999999999876 599999999886421 46899999
Q ss_pred Eeccccccc-------ChhHHHHHHHHHHhcccCCeEEEc
Q 015306 195 SEWMGYFLL-------FENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 195 s~~~~~~l~-------~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+++..+... .......++..+.++|+|||.++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli 270 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLV 270 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEE
Confidence 987533221 234567889999999999998663
No 96
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.50 E-value=3.7e-14 Score=123.16 Aligned_cols=111 Identities=13% Similarity=0.078 Sum_probs=85.9
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (409)
+.+...+... +.+..+|||||||+|.+++.++.. +..+|+|+|+|+ |++.+++++..+|..+++++ .|.....
T Consensus 37 d~fY~~~~~~--l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~- 111 (200)
T 3fzg_A 37 NDFYTYVFGN--IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV- 111 (200)
T ss_dssp HHHHHHHHHH--SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH-
T ss_pred HHHHHHHHhh--cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC-
Confidence 3444444433 356789999999999999999884 445999999999 99999999999999866777 5555443
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
+.++||+|++.-+.+++ .+.+..+..+.+.|+|||++|
T Consensus 112 ~~~~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp TTSEEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEE
T ss_pred CCCCcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEE
Confidence 44899999997655544 444455668889999999998
No 97
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.50 E-value=1.4e-13 Score=134.44 Aligned_cols=119 Identities=21% Similarity=0.219 Sum_probs=96.5
Q ss_pred hHHHHHHHHHhcc--CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc
Q 015306 106 RTKSYQNVIYQNK--FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE 182 (409)
Q Consensus 106 r~~~~~~~l~~~~--~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~ 182 (409)
..+.+.+.+.... ...++.+|||+|||+|.++..+++.+. +|+++|+|+ +++.|++++..+++. ++++.+|+.+
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~ 291 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDE 291 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTT
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhh
Confidence 3445555554432 235788999999999999999999865 999999999 999999999999875 8999999998
Q ss_pred ccCCCCceeEEEEecccccc--cChhHHHHHHHHHHhcccCCeEEEc
Q 015306 183 IELPVTKVDIIISEWMGYFL--LFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 183 ~~~~~~~~DvVvs~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+.++||+|+++++.+.. ........++..+.++|||||+++.
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 87666899999998754331 1135677899999999999999885
No 98
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=1.3e-13 Score=120.76 Aligned_cols=109 Identities=23% Similarity=0.268 Sum_probs=89.8
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC-Cc
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TK 189 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~ 189 (409)
..+.......++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.+++++..+++.++++++.+|+.+ .++. ++
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 100 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPD 100 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCC
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCC
Confidence 334443456788999999999999999999987 7999999999 999999999999886679999999987 2332 58
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
||+|++... + ..+..++..+.++|+|||.++..
T Consensus 101 ~D~v~~~~~---~---~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 101 IDIAVVGGS---G---GELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp EEEEEESCC---T---TCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCEEEECCc---h---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 999998643 2 24578899999999999998853
No 99
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.50 E-value=8.5e-14 Score=125.84 Aligned_cols=107 Identities=20% Similarity=0.294 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-c-CC----CCcee
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E-LP----VTKVD 191 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~----~~~~D 191 (409)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|++++..+++.++++++.+|+.+. + ++ .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999984 2 56999999999 9999999999999988899999998764 2 22 16899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
+|+++.. ..+......++..+ ++|||||+++.....
T Consensus 137 ~V~~d~~---~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHW---KDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEEECSC---GGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEcCC---cccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9998643 22222333566666 999999999976543
No 100
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.50 E-value=5.7e-14 Score=125.32 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
++.+|||+|||+|.++..+++. +..+|+++|+|+ +++.|++++..+++.+ ++++++|+.+.. +.++||+|++..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP-SEPPFDGVISRAF- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC-CCSCEEEEECSCS-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC-ccCCcCEEEEecc-
Confidence 5789999999999999999984 566999999999 9999999999998876 999999998876 3478999998542
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+..++..+.++|+|||.++..
T Consensus 142 ------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 ------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 34668899999999999998854
No 101
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.50 E-value=1.1e-13 Score=123.82 Aligned_cols=99 Identities=19% Similarity=0.171 Sum_probs=83.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++++ ++.++.+|+.+++ +.++||+|++..+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~ 111 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHAC 111 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSC
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCc
Confidence 45788999999999999999999866 999999999 999999886 2678899999988 5689999999765
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+++. ...+..++..+.++|||||+++..
T Consensus 112 l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 112 LLHVP-RDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 44332 347789999999999999999853
No 102
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.50 E-value=8.3e-14 Score=136.58 Aligned_cols=106 Identities=27% Similarity=0.363 Sum_probs=89.3
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHc-----C-CC-CcEEEEEcccccc------
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEAN-----G-FS-NVITVLKGKIEEI------ 183 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~-----~-~~-~~i~~~~~d~~~~------ 183 (409)
..++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|++++..+ | +. .+++++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999984 355999999999 999999988765 3 22 4699999999987
Q ss_pred cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 184 ~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++++++||+|+++.+.+ +..++..++..+.++|||||+++..
T Consensus 161 ~~~~~~fD~V~~~~~l~---~~~d~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCN---LSTNKLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CCCTTCEEEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchh---cCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 77778999999976644 3356789999999999999999864
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.49 E-value=2.3e-13 Score=121.64 Aligned_cols=103 Identities=19% Similarity=0.127 Sum_probs=85.1
Q ss_pred HhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEE
Q 015306 115 YQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDII 193 (409)
Q Consensus 115 ~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvV 193 (409)
.......++.+|||||||+|.++..+++. ..+|+++|+++ +++.|++++...++. +++++.+|+.+...+.++||+|
T Consensus 70 ~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 70 TELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEE
T ss_pred HHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccEE
Confidence 33355678899999999999999999998 45999999999 999999999998886 5999999998876556799999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++......+. ..+.++|||||+++..
T Consensus 148 ~~~~~~~~~~---------~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 148 IVTAAPPEIP---------TALMTQLDEGGILVLP 173 (210)
T ss_dssp EESSBCSSCC---------THHHHTEEEEEEEEEE
T ss_pred EEccchhhhh---------HHHHHhcccCcEEEEE
Confidence 9975433222 2467899999998853
No 104
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=6.4e-14 Score=124.60 Aligned_cols=98 Identities=23% Similarity=0.271 Sum_probs=84.0
Q ss_pred CCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccccc
Q 015306 123 DKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYF 201 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~ 201 (409)
+.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++. .+++++++|+.++++++++||+|++..+.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhc
Confidence 78999999999999999999866 999999999 999998873 3489999999999887789999999765443
Q ss_pred ccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 202 LLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 202 l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+. ...+..+++.+.++|||||.++..
T Consensus 115 ~~-~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 115 MG-PGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp CC-TTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 32 236789999999999999998853
No 105
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.49 E-value=1e-13 Score=126.34 Aligned_cols=102 Identities=23% Similarity=0.279 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC--CCCceeEEEEe
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--PVTKVDIIISE 196 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~DvVvs~ 196 (409)
.++.+|||||||+|..+..+++. +..+|+++|+++ +++.|++++...++.++++++.+|+.+... ..++||+|+++
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 47789999999999999999994 367999999999 999999999999998789999999987532 24899999986
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.. ......+++.+.++|||||+++..
T Consensus 150 ~~------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 150 AA------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp TT------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred Cc------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 42 234667899999999999999864
No 106
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=1.4e-13 Score=126.70 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cC-C-CCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-EL-P-VTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~-~-~~~~DvVv 194 (409)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. +. . .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 46789999999999999999995 3 56999999999 9999999999999988899999999874 22 2 24899999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
++.. ......+++.+.++|||||+++...
T Consensus 142 ~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 142 IDAD------KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ECSC------GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ECCc------hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 8541 2455678899999999999998644
No 107
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.49 E-value=5.4e-15 Score=135.37 Aligned_cols=103 Identities=19% Similarity=0.215 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||+|||+|.++..+++.| .+|+|+|+|+ +++.|++++..+++.++++++++|+.++. +.++||+|+++++.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 378899999999999999999987 6999999999 99999999999998767999999999987 44799999998753
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+. .......+..+.++|+|||.++..
T Consensus 155 ~~---~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GG---PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SS---GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CC---cchhhhHHHHHHhhcCCcceeHHH
Confidence 33 233333556778999999987644
No 108
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=2.6e-13 Score=126.94 Aligned_cols=123 Identities=19% Similarity=0.172 Sum_probs=96.0
Q ss_pred ChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc
Q 015306 103 DVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI 180 (409)
Q Consensus 103 d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~ 180 (409)
.+..++.+.+.+..... .++.+|||+|||+|.++..+++ .+..+|+|+|+|+ +++.|++++..+++. +++++++|+
T Consensus 91 pr~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~ 168 (276)
T 2b3t_A 91 PRPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDW 168 (276)
T ss_dssp CCTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCST
T ss_pred cCchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcch
Confidence 34456666666665443 5678999999999999999997 5567999999999 999999999998886 599999999
Q ss_pred ccccCCCCceeEEEEecccccc----------cCh------------hHHHHHHHHHHhcccCCeEEEcc
Q 015306 181 EEIELPVTKVDIIISEWMGYFL----------LFE------------NMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 181 ~~~~~~~~~~DvVvs~~~~~~l----------~~~------------~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+. ++.++||+|++++..... .++ .....++..+.++|+|||+++..
T Consensus 169 ~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 169 FSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 875 334789999998532111 111 34578889999999999998864
No 109
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.49 E-value=1.8e-13 Score=130.33 Aligned_cols=108 Identities=15% Similarity=0.116 Sum_probs=88.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC------CCCcEEEEEccccccc----CC--C
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG------FSNVITVLKGKIEEIE----LP--V 187 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~------~~~~i~~~~~d~~~~~----~~--~ 187 (409)
.++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++....+ ...+++++++|+.+++ ++ .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46789999999999999999987677999999999 9999999887642 2246999999999876 43 3
Q ss_pred CceeEEEEecccccc-cChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEWMGYFL-LFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|++..+.+++ .+...+..++..+.++|||||.++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 589999997654444 45567789999999999999999853
No 110
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.49 E-value=1.6e-13 Score=123.44 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEe
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISE 196 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~ 196 (409)
.++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|++++..+++.+ ++++++|+.+++ ++.++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~n-v~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQN-VKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSS-EEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 36779999999999999999985 466999999999 9999999999998854 999999999875 566889999875
Q ss_pred ccccccc--Ch---hHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLL--FE---NMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~--~~---~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
....... +. -....++..+.++|||||.++..
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 3221110 00 01367889999999999999853
No 111
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=3.5e-14 Score=131.77 Aligned_cols=106 Identities=31% Similarity=0.328 Sum_probs=87.1
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
+.+.+.......++.+|||||||+|.++..+++.+ .+|+|+|+|+ +++.|+++. +++++.+|+++++++++
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~ 93 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPDK 93 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCTT
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCCC
Confidence 44444444556788999999999999999999865 4999999999 998876543 59999999999988888
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+||+|++..+ +.+..++..+++.+.++|| ||+++.
T Consensus 94 ~fD~v~~~~~---l~~~~~~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 94 SVDGVISILA---IHHFSHLEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp CBSEEEEESC---GGGCSSHHHHHHHHHHHBC-SSCEEE
T ss_pred CEeEEEEcch---HhhccCHHHHHHHHHHHhC-CcEEEE
Confidence 9999999765 3344678899999999999 997653
No 112
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=1.4e-13 Score=126.99 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=86.8
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCcee
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (409)
+.......++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.++++. .+++++.+|+.+++ ++++||
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~-~~~~fD 97 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWK-PAQKAD 97 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCC-CSSCEE
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcC-ccCCcC
Confidence 344455667889999999999999999985 355999999999 999998871 35899999999987 668999
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|++..+ +.+..++..++..+.++|||||.++..
T Consensus 98 ~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 98 LLYANAV---FQWVPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp EEEEESC---GGGSTTHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEeCc---hhhCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 9999765 333357789999999999999998854
No 113
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.48 E-value=1.2e-13 Score=129.84 Aligned_cols=124 Identities=24% Similarity=0.264 Sum_probs=95.6
Q ss_pred hcChHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc
Q 015306 101 LKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK 179 (409)
Q Consensus 101 l~d~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d 179 (409)
+..+..++.+.+.+.......++.+|||+|||+|.+++.+++.+..+|+|+|+|+ +++.|++++..+++.++++++++|
T Consensus 102 lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D 181 (284)
T 1nv8_A 102 FVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGE 181 (284)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESS
T ss_pred eecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 3345556666666554433346779999999999999999987556999999999 999999999999998889999999
Q ss_pred cccccCCCCce---eEEEEeccccccc---------ChhHH--------HHHHHHHH-hcccCCeEEEc
Q 015306 180 IEEIELPVTKV---DIIISEWMGYFLL---------FENML--------NTVLYARD-KWLVDDGIVLP 227 (409)
Q Consensus 180 ~~~~~~~~~~~---DvVvs~~~~~~l~---------~~~~~--------~~~l~~~~-~~LkpgG~lip 227 (409)
+.+. ++ ++| |+|++++. |... +++.. ..+++.+. +.|+|||.++.
T Consensus 182 ~~~~-~~-~~f~~~D~IvsnPP-yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 182 FLEP-FK-EKFASIEMILSNPP-YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp TTGG-GG-GGTTTCCEEEECCC-CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred chhh-cc-cccCCCCEEEEcCC-CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 9874 33 578 99999853 2211 22221 26788888 99999999885
No 114
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=1.2e-14 Score=129.91 Aligned_cols=123 Identities=19% Similarity=0.012 Sum_probs=76.0
Q ss_pred cChHhHHHHHHHHHhccCC-CCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc
Q 015306 102 KDVVRTKSYQNVIYQNKFL-FKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG 178 (409)
Q Consensus 102 ~d~~r~~~~~~~l~~~~~~-~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~ 178 (409)
..+..++.+.+.+...... .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..+++ +++++++
T Consensus 9 ~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~ 86 (215)
T 4dzr_A 9 IPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAA 86 (215)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHH
T ss_pred CCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEc
Confidence 3444555666666554433 678899999999999999999964 44999999999 99999999988877 5999999
Q ss_pred ccccccCCC-----CceeEEEEecccccccC-----------------------hhHHHHHHHHHHhcccCCeE-EEc
Q 015306 179 KIEEIELPV-----TKVDIIISEWMGYFLLF-----------------------ENMLNTVLYARDKWLVDDGI-VLP 227 (409)
Q Consensus 179 d~~~~~~~~-----~~~DvVvs~~~~~~l~~-----------------------~~~~~~~l~~~~~~LkpgG~-lip 227 (409)
|+.+ .++. ++||+|++++..+.... ......++..+.++|||||+ ++.
T Consensus 87 d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 87 DGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred chHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 9987 4443 89999999864211100 00126778888999999999 553
No 115
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.48 E-value=2.1e-13 Score=133.13 Aligned_cols=113 Identities=15% Similarity=0.085 Sum_probs=89.9
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCC--cEEEEEcccccccCCCCc
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSN--VITVLKGKIEEIELPVTK 189 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~--~i~~~~~d~~~~~~~~~~ 189 (409)
+.......++.+|||+|||+|.+++.+++.+ ..+|+++|+|+ +++.|++++..+++.+ +++++.+|+.+. ++.++
T Consensus 214 ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-~~~~~ 292 (375)
T 4dcm_A 214 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-VEPFR 292 (375)
T ss_dssp HHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT-CCTTC
T ss_pred HHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc-CCCCC
Confidence 4444555667899999999999999999964 67999999999 9999999999998764 588999999884 45579
Q ss_pred eeEEEEecccccc--cChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFL--LFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
||+|+++++.+.. ........++..+.++|||||+++.
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 9999998753321 1123345789999999999999884
No 116
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=1.6e-13 Score=126.69 Aligned_cols=106 Identities=24% Similarity=0.324 Sum_probs=90.3
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCc
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (409)
.+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+++.++++++.+|+.+. ++.++
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 162 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEEN 162 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCS
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCC
Confidence 3444456788999999999999999999996 5 67999999999 9999999999999988899999999976 55578
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
||+|++++. ....++..+.++|+|||+++.
T Consensus 163 ~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~ 192 (255)
T 3mb5_A 163 VDHVILDLP--------QPERVVEHAAKALKPGGFFVA 192 (255)
T ss_dssp EEEEEECSS--------CGGGGHHHHHHHEEEEEEEEE
T ss_pred cCEEEECCC--------CHHHHHHHHHHHcCCCCEEEE
Confidence 999998642 334678888999999999884
No 117
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=2.4e-13 Score=118.21 Aligned_cols=104 Identities=23% Similarity=0.288 Sum_probs=86.6
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCcee
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (409)
.+.......++.+|||+|||+|.++..+++ +..+|+|+|+++ +++.|++++..++++ +++++.+|+.+ .++.++||
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~-~~~~~~~D 102 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAED-VLDKLEFN 102 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHH-HGGGCCCS
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccc-cccCCCCc
Confidence 333334557888999999999999999999 567999999999 999999999999884 59999999988 55557899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|++..+ ..+..++..+.++ |||.++..
T Consensus 103 ~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 103 KAFIGGT-------KNIEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp EEEECSC-------SCHHHHHHHHHHT--TCCEEEEE
T ss_pred EEEECCc-------ccHHHHHHHHhhC--CCCEEEEE
Confidence 9999654 4566788888887 99998853
No 118
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.48 E-value=2.6e-13 Score=123.51 Aligned_cols=110 Identities=19% Similarity=0.243 Sum_probs=88.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
.+.+.+.... .++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++. .+++++.+|+.++++ .
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-G 98 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-S
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-C
Confidence 3444444332 5778999999999999999999765 999999999 999998864 248999999998877 4
Q ss_pred CceeEEEEec-ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEW-MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|+|.. +.+++.....+..+++.+.++|||||.++..
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 8999999642 3344444467789999999999999999864
No 119
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.48 E-value=2.7e-13 Score=121.73 Aligned_cols=101 Identities=25% Similarity=0.231 Sum_probs=79.8
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc----cCCCCceeE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----ELPVTKVDI 192 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~Dv 192 (409)
...++.+|||||||+|.++..+++. |..+|+|+|+|+ +++.+.+..... +++.++.+|+... +++ ++||+
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD~ 129 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVDL 129 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-cceeE
Confidence 4568899999999999999999985 446999999999 988777766553 3589999998774 344 78999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+++.. .......++.++.++|||||+++..
T Consensus 130 V~~~~~-----~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 130 IYQDIA-----QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecc-----ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 999731 2234455689999999999998853
No 120
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.48 E-value=1.1e-13 Score=127.98 Aligned_cols=107 Identities=14% Similarity=0.100 Sum_probs=81.1
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----- 185 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----- 185 (409)
+.+.......++.+|||||||+|.++..+++.|+ +|+|+|+|+ |++.|++++..+ ++..++.++..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKE 106 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGG
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccc
Confidence 3344456678899999999999999999999876 999999999 999999987654 22333333322
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..++||+|+++.+.+++. ......++..+.++| |||+++.+
T Consensus 107 ~~~~fD~Vv~~~~l~~~~-~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 107 LAGHFDFVLNDRLINRFT-TEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp GTTCCSEEEEESCGGGSC-HHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred cCCCccEEEEhhhhHhCC-HHHHHHHHHHHHHhC-cCcEEEEE
Confidence 137899999986544332 345678889999999 99998854
No 121
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.47 E-value=1.1e-13 Score=126.47 Aligned_cols=98 Identities=19% Similarity=0.244 Sum_probs=82.6
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc--cCCCCceeEEEEe
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISE 196 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~DvVvs~ 196 (409)
..++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++ ++++.+|+.+. ++++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 46778999999999999999999866 799999999 99988864 68899999886 6677899999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+.+++. ...+..++..+.++|||||+++..
T Consensus 109 ~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 109 HFVEHLD-PERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp SCGGGSC-GGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred CchhhCC-cHHHHHHHHHHHHHcCCCcEEEEE
Confidence 6544442 336689999999999999998853
No 122
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.3e-13 Score=129.17 Aligned_cols=98 Identities=20% Similarity=0.248 Sum_probs=83.2
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
...++.+|||||||+|.++..+++.+ .+|+|+|+|+ +++.|+++. .+++++.+|+.+++++ ++||+|++..
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~~~ 125 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVD-KPLDAVFSNA 125 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCS-SCEEEEEEES
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcC-CCcCEEEEcc
Confidence 35678899999999999999999954 5999999999 999998765 3488999999998874 8999999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+ +.+..++..++.++.++|||||+++.
T Consensus 126 ~---l~~~~d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 126 M---LHWVKEPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp C---GGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred h---hhhCcCHHHHHHHHHHhcCCCcEEEE
Confidence 5 33335678899999999999999885
No 123
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.47 E-value=2.8e-13 Score=126.27 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=89.7
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CC-CEEEEEecHH-------HHHHHHHHHHHcCCCCcEEEEEcc---c
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-------MANMAKQIVEANGFSNVITVLKGK---I 180 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~-~~V~~vD~s~-------~~~~a~~~~~~~~~~~~i~~~~~d---~ 180 (409)
.+.......++.+|||||||+|.++..+++. |. .+|+|+|+|+ +++.|++++...++.++++++.+| .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 3444455678899999999999999999996 43 6999999986 699999999988887789999998 4
Q ss_pred ccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 181 EEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 181 ~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+++++++||+|++..+.+++ .....+++.+.++++|||+++..
T Consensus 114 ~~~~~~~~~fD~v~~~~~l~~~---~~~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 114 DLGPIADQHFDRVVLAHSLWYF---ASANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp CCGGGTTCCCSEEEEESCGGGS---SCHHHHHHHHHHHTTTCSEEEEE
T ss_pred ccCCCCCCCEEEEEEccchhhC---CCHHHHHHHHHHHhCCCCEEEEE
Confidence 4455566899999997654444 34456777777888889998853
No 124
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.47 E-value=3.1e-13 Score=122.95 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=83.7
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc----ccCCCCcee
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE----IELPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~D 191 (409)
....++.+|||+|||+|.++..+++. |..+|+|+|+|+ +++.|++++..+ .++.++.+|+.+ .+++ ++||
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-ccEE
Confidence 44567899999999999999999995 667999999999 999999887654 469999999988 6665 7899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|++.. ........++..+.++|||||+++.
T Consensus 146 ~v~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 146 VIYEDV-----AQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp EEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEec-----CChhHHHHHHHHHHHhCCCCcEEEE
Confidence 999542 2233456778999999999999885
No 125
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.47 E-value=2.5e-13 Score=133.19 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=89.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEccccccc--C--CCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIE--L--PVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~--~--~~~~~DvVv 194 (409)
.++.+|||+|||+|.+++.+++.|+.+|+++|+|+ +++.|++++..+++.+ +++++++|+.+.. . ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 57889999999999999999998888999999999 9999999999999975 7999999998742 1 135899999
Q ss_pred Eeccccc------ccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYF------LLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~------l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+++..+. .........++..+.++|+|||+++.+.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9875321 1112345567788889999999988653
No 126
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.46 E-value=7.5e-14 Score=120.31 Aligned_cols=99 Identities=17% Similarity=0.096 Sum_probs=79.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CC--CCceeEEEEe
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP--VTKVDIIISE 196 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~--~~~~DvVvs~ 196 (409)
++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|++++..+++ +++++++|+.+.. .+ .++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 778999999999999999999876 499999999 99999999998887 5999999998742 11 2489999998
Q ss_pred cccccccChhHHHHHHHHHH--hcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYARD--KWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~--~~LkpgG~lip~ 228 (409)
++.. ...+.++..+. ++|+|||+++..
T Consensus 118 ~~~~-----~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 118 PPYA-----MDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp CCTT-----SCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred CCCc-----hhHHHHHHHHHhhcccCCCcEEEEE
Confidence 6422 22334445555 999999998853
No 127
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.46 E-value=4.3e-13 Score=125.87 Aligned_cols=117 Identities=18% Similarity=0.293 Sum_probs=88.4
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEec-HH-HHHHHHHHH-----HHcCCC----CcEEE
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVEC-SQ-MANMAKQIV-----EANGFS----NVITV 175 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~-s~-~~~~a~~~~-----~~~~~~----~~i~~ 175 (409)
...+.+.+.......++.+|||||||+|.+++.+++.|+.+|+|+|+ ++ +++.|++++ ..+++. +++++
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 44556666665555688999999999999999999988779999999 89 999999999 555554 46888
Q ss_pred EEccccccc--C----CCCceeEEEEecccccccChhHHHHHHHHHHhccc---C--CeEEE
Q 015306 176 LKGKIEEIE--L----PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLV---D--DGIVL 226 (409)
Q Consensus 176 ~~~d~~~~~--~----~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~li 226 (409)
+..+..+.. + +.++||+|++..+ +.+......++..+.++|+ | ||+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv---l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~ 202 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADL---LSFHQAHDALLRSVKMLLALPANDPTAVAL 202 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESC---CSCGGGHHHHHHHHHHHBCCTTTCTTCEEE
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCc---ccChHHHHHHHHHHHHHhcccCCCCCCEEE
Confidence 876654421 1 3478999998433 5556778899999999999 9 99765
No 128
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=2.5e-13 Score=122.72 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CC---CCceeE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP---VTKVDI 192 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~---~~~~Dv 192 (409)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+.. ++ .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 46789999999999999999995 3 45999999999 99999999999999888999999997642 11 157999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
|++... ......++..+.++|+|||+++...
T Consensus 137 v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 137 IFIDAD------KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 998642 2455688899999999999988654
No 129
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.46 E-value=6.8e-14 Score=120.80 Aligned_cols=96 Identities=22% Similarity=0.299 Sum_probs=81.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.++++ . .+++++.+| .+++.++||+|++..+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~-~~v~~~~~d---~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----F-DSVITLSDP---KEIPDNSVDFILFANS 84 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----C-TTSEEESSG---GGSCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----C-CCcEEEeCC---CCCCCCceEEEEEccc
Confidence 46788999999999999999999765 999999999 99999887 2 458999999 5566689999999765
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+..+...+++.+.++|||||+++..
T Consensus 85 ---l~~~~~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 85 ---FHDMDDKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp ---STTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hhcccCHHHHHHHHHHhcCCCCEEEEE
Confidence 334356789999999999999999853
No 130
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.46 E-value=1.4e-13 Score=129.57 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=80.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-----------------CCC------------
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-----------------GFS------------ 170 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~-----------------~~~------------ 170 (409)
.++.+|||||||+|.++..++..+..+|+|+|+|+ |++.|++++... +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 47789999999999976666654455999999999 999998865421 100
Q ss_pred CcEEEEEccccc-ccC-----CCCceeEEEEecccccccC-hhHHHHHHHHHHhcccCCeEEEcc
Q 015306 171 NVITVLKGKIEE-IEL-----PVTKVDIIISEWMGYFLLF-ENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 171 ~~i~~~~~d~~~-~~~-----~~~~~DvVvs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..++++.+|+.+ +++ ++++||+|++..+.+++.. ..++..++.++.++|||||+++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 126788889987 443 3467999999765333222 457889999999999999999864
No 131
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=1.8e-13 Score=123.69 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=86.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCC----Ccee
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPV----TKVD 191 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~----~~~D 191 (409)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++++|+.+.. +.. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999985 3 57999999999 99999999999999888999999997652 111 7899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+|+++.. ......++..+.++|||||+++...
T Consensus 143 ~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 143 LIYIDAD------KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9997542 2456778899999999999998543
No 132
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.45 E-value=6.4e-14 Score=128.61 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=87.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC------CCcee
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP------VTKVD 191 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~~D 191 (409)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|++++...++.++|+++.+|+.+.... .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 46789999999999999999994 3 56999999999 9999999999999988899999999775321 37899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCC
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
+|+++.. ......+++.+.++|+|||+++....
T Consensus 139 ~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDAD------KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEESC------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 9998642 24566788999999999999986543
No 133
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.45 E-value=5e-13 Score=127.64 Aligned_cols=106 Identities=23% Similarity=0.160 Sum_probs=86.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCc
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (409)
.+.......++.+|||||||+|.++..+++.+. .+|+++|+|+ +++.|++++..+++.+ ++++.+|+.+...+.++
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~~~~~ 144 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVPEFSP 144 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGGGCC
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccccCCC
Confidence 334445567899999999999999999999643 5799999999 9999999999999876 99999999886544578
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
||+|++..+...+. +.+.++|||||+++..
T Consensus 145 fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 145 YDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEEEEECSBBSCCC---------HHHHHHEEEEEEEEEE
T ss_pred eEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEE
Confidence 99999976533322 4567899999998864
No 134
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.45 E-value=6.8e-14 Score=129.52 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=87.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC----------------------------
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF---------------------------- 169 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~---------------------------- 169 (409)
...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4467789999999999999999887767999999999 99999988765421
Q ss_pred CCcE-EEEEcccccccC-CC---CceeEEEEeccccccc-ChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 170 SNVI-TVLKGKIEEIEL-PV---TKVDIIISEWMGYFLL-FENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 170 ~~~i-~~~~~d~~~~~~-~~---~~~DvVvs~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..++ +++.+|+.+... +. ++||+|++..+.+++. +...+..++..+.++|||||.++..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 197 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMV 197 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Confidence 1127 999999988653 44 7899999965433221 4567889999999999999998854
No 135
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.44 E-value=3.6e-13 Score=122.60 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCC--CCceeEEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELP--VTKVDIIIS 195 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~~DvVvs 195 (409)
.++.+|||||||+|.++..+++. +..+|+++|+++ +++.|++++...++.++++++.+|+.+. +.. .++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 57789999999999999999995 356999999999 9999999999999887899999999874 221 378999998
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
... . .....++..+.++|+|||+++...
T Consensus 133 ~~~---~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAA---K---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGG---G---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCC---H---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 653 1 256788899999999999998654
No 136
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.44 E-value=7.3e-13 Score=120.61 Aligned_cols=102 Identities=18% Similarity=0.193 Sum_probs=83.1
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc---cCCCCcee
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~~D 191 (409)
....++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.+.+++..+ .+++++.+|+.+. +...++||
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEE
Confidence 44667899999999999999999995 356999999999 998888888776 4599999999873 33457899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|++++. .......++..+.++|||||+++.
T Consensus 150 ~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 150 VIFADVA-----QPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp EEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEE
Confidence 9999653 223445667889999999999885
No 137
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.44 E-value=6.3e-13 Score=128.89 Aligned_cols=117 Identities=21% Similarity=0.130 Sum_probs=95.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG--AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (409)
.+..++.......++.+|||+|||+|.+++.++..+ ..+|+|+|+++ +++.|++++..+++. +++++++|+.+++.
T Consensus 190 ~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 190 VLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPR 268 (354)
T ss_dssp HHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcc
Confidence 455555555667788999999999999999999953 46999999999 999999999999997 79999999999887
Q ss_pred CCCceeEEEEeccccccc-C-----hhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLL-F-----ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~-~-----~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.+.||+|+++++ |... . ......++..+.++|||||.++.
T Consensus 269 ~~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 269 FFPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp TCCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred ccCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 6677999999874 3221 1 12236788899999999999875
No 138
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=4.6e-13 Score=126.25 Aligned_cols=105 Identities=20% Similarity=0.162 Sum_probs=78.0
Q ss_pred CCCCEEEEEcCCCChHHHHHH----H-cCCCEE--EEEecHH-HHHHHHHHHHHc-CCCC-cEEEEEccccccc------
Q 015306 121 FKDKVVLDVGAGTGILSLFCA----K-AGAAHV--YAVECSQ-MANMAKQIVEAN-GFSN-VITVLKGKIEEIE------ 184 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la----~-~g~~~V--~~vD~s~-~~~~a~~~~~~~-~~~~-~i~~~~~d~~~~~------ 184 (409)
.++.+|||||||+|.++..++ . .+..+| +|+|+|+ |++.|++++... ++.+ .+.+..++++++.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 466799999999997665332 2 233444 9999999 999999988754 4432 2345567776654
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++++||+|++..+ +++..++..++.++.++|||||+++..
T Consensus 131 ~~~~~fD~V~~~~~---l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 131 KELQKWDFIHMIQM---LYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TCCCCEEEEEEESC---GGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceeEEEEeee---eeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 44689999999655 555567889999999999999998853
No 139
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.43 E-value=9e-13 Score=130.00 Aligned_cols=113 Identities=19% Similarity=0.208 Sum_probs=88.1
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHH-------HHHHHHcCCC-CcEEEEEcccc
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMA-------KQIVEANGFS-NVITVLKGKIE 181 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a-------~~~~~~~~~~-~~i~~~~~d~~ 181 (409)
..+.......++.+|||||||+|.++..+++ .|..+|+|||+++ +++.| ++++...|+. .+++++++|..
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 3344445667899999999999999999999 5777999999999 99999 8888888853 56999987543
Q ss_pred cc--cC--CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 182 EI--EL--PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 182 ~~--~~--~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.. .+ ..++||+|+++.. +. ...+..++.++.+.|||||+++..
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~---l~-~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNF---LF-DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCT---TC-CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccccccCCCCEEEEeCc---cc-cccHHHHHHHHHHhCCCCeEEEEe
Confidence 21 11 1378999998532 22 256777889999999999998854
No 140
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.43 E-value=1.8e-13 Score=126.07 Aligned_cols=107 Identities=10% Similarity=0.064 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc---CCCEEEEEecHH-HHHHHHHHHHHc---CCCCc---------------------
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA---GAAHVYAVECSQ-MANMAKQIVEAN---GFSNV--------------------- 172 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~---g~~~V~~vD~s~-~~~~a~~~~~~~---~~~~~--------------------- 172 (409)
.++.+|||+|||+|.+++.+++. +..+|+|+|+|+ +++.|++++..+ ++.++
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 46789999999999999999986 345899999999 999999988766 44333
Q ss_pred ----EE-------------EEEcccccccC-----CCCceeEEEEecccccccC------hhHHHHHHHHHHhcccCCeE
Q 015306 173 ----IT-------------VLKGKIEEIEL-----PVTKVDIIISEWMGYFLLF------ENMLNTVLYARDKWLVDDGI 224 (409)
Q Consensus 173 ----i~-------------~~~~d~~~~~~-----~~~~~DvVvs~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~ 224 (409)
++ ++++|+.+... ...+||+|+++++...... ......++..+.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 66 99999987532 3348999999864322221 24567889999999999999
Q ss_pred EEc
Q 015306 225 VLP 227 (409)
Q Consensus 225 lip 227 (409)
++.
T Consensus 210 l~~ 212 (250)
T 1o9g_A 210 IAV 212 (250)
T ss_dssp EEE
T ss_pred EEE
Confidence 884
No 141
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.43 E-value=3.6e-13 Score=120.61 Aligned_cols=102 Identities=18% Similarity=0.256 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCCCCceeEEEEe
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISE 196 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~DvVvs~ 196 (409)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. +...+ ||+|+++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 36789999999999999999985 3 56999999999 9999999999988877899999999875 33236 9999986
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
.. ......+++.+.++|||||+++...
T Consensus 134 ~~------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 31 2355788999999999999998654
No 142
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=7.3e-13 Score=122.18 Aligned_cols=106 Identities=27% Similarity=0.242 Sum_probs=88.7
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHc-CCCCcEEEEEcccccccCCCC
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEAN-GFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~~ 188 (409)
.+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+ + .++++++.+|+.+.+++.+
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCTT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCCC
Confidence 3444456778999999999999999999996 5 56999999999 999999999887 7 4569999999998867668
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+||+|++++. ....++..+.++|+|||.++.
T Consensus 166 ~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~ 196 (258)
T 2pwy_A 166 AYDGVALDLM--------EPWKVLEKAALALKPDRFLVA 196 (258)
T ss_dssp CEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEE
T ss_pred CcCEEEECCc--------CHHHHHHHHHHhCCCCCEEEE
Confidence 8999998542 334678888899999999884
No 143
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=7.1e-13 Score=116.35 Aligned_cols=100 Identities=23% Similarity=0.272 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe-c
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE-W 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~-~ 197 (409)
..++.+|||||||+|.++..+++.+. +|+++|+++ +++.++++.. +++++.+|+.+++++.++||+|++. .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCCCCCceeEEEECCc
Confidence 35788999999999999999999865 999999999 9999988752 3889999999987777899999996 3
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.+++ .......++..+.++|+|||.++.
T Consensus 117 ~~~~~-~~~~~~~~l~~~~~~l~~~G~l~~ 145 (195)
T 3cgg_A 117 VMGFL-AEDGREPALANIHRALGADGRAVI 145 (195)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhhc-ChHHHHHHHHHHHHHhCCCCEEEE
Confidence 33322 335667899999999999999885
No 144
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.43 E-value=8.9e-13 Score=119.66 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=82.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCcee
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (409)
.+.......++.+|||||||+|.++..+++.+ .+|+++|+++ +++.|++++...+ +++++.+|+.+.....++||
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD 136 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYD 136 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCcc
Confidence 34444556788999999999999999999986 6999999999 9999999987665 59999999987333347899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|++....+.+. ..+.++|+|||+++..
T Consensus 137 ~v~~~~~~~~~~---------~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 137 RVVVWATAPTLL---------CKPYEQLKEGGIMILP 164 (231)
T ss_dssp EEEESSBBSSCC---------HHHHHTEEEEEEEEEE
T ss_pred EEEECCcHHHHH---------HHHHHHcCCCcEEEEE
Confidence 999975433221 3567899999998744
No 145
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=5.3e-13 Score=123.60 Aligned_cols=97 Identities=25% Similarity=0.353 Sum_probs=80.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~ 200 (409)
++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++.. . .++.+|+.++++++++||+|++.....
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~~~fD~v~~~~~~~ 125 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPSGAFEAVLALGDVL 125 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCTTCEEEEEECSSHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCCCCEEEEEEcchhh
Confidence 788999999999999999999865 999999999 9999988753 1 288999999888778999999853222
Q ss_pred cccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 201 FLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++. ..+..+++++.++|||||.++..
T Consensus 126 ~~~--~~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 126 SYV--ENKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp HHC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc--ccHHHHHHHHHHHcCCCeEEEEE
Confidence 221 34788999999999999998854
No 146
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=4.9e-13 Score=124.87 Aligned_cols=100 Identities=22% Similarity=0.285 Sum_probs=85.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
...++.+|||+|||+|.+++.+++. +..+|+|+|+++ +++.|++++..+++.+ +.++++|+.+.+. .++||+|+++
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~~~-~~~~D~Vi~d 193 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDVEL-KDVADRVIMG 193 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGCCC-TTCEEEEEEC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHcCc-cCCceEEEEC
Confidence 3578899999999999999999996 467999999999 9999999999999865 8899999998833 4789999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.. ....++..+.+.|+|||+++.
T Consensus 194 ~p~-------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 194 YVH-------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp CCS-------SGGGGHHHHHHHEEEEEEEEE
T ss_pred Ccc-------cHHHHHHHHHHHcCCCCEEEE
Confidence 642 334567777899999999884
No 147
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=1.3e-12 Score=117.29 Aligned_cols=105 Identities=22% Similarity=0.205 Sum_probs=83.0
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
+.......++.+|||||||+|.++..+++.+. .+|+++|+++ +++.|++++...++.+ ++++.+|+.......++|
T Consensus 69 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~f 147 (215)
T 2yxe_A 69 MCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGDGTLGYEPLAPY 147 (215)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESCGGGCCGGGCCE
T ss_pred HHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECCcccCCCCCCCe
Confidence 33344567889999999999999999999642 6999999999 9999999998888765 999999986543324789
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|++......+. +.+.++|||||+++..
T Consensus 148 D~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 148 DRIYTTAAGPKIP---------EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp EEEEESSBBSSCC---------HHHHHTEEEEEEEEEE
T ss_pred eEEEECCchHHHH---------HHHHHHcCCCcEEEEE
Confidence 9999965433221 3667999999998743
No 148
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.42 E-value=6.9e-13 Score=130.62 Aligned_cols=109 Identities=20% Similarity=0.206 Sum_probs=90.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC-CCcEEEEEcccccccC----CCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF-SNVITVLKGKIEEIEL----PVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~~----~~~~~DvVv 194 (409)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+|+ +++.|++++..+++ .++++++++|+.++.. ...+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 57889999999999999999998888999999999 99999999999998 6579999999988632 136899999
Q ss_pred Eeccccc------ccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYF------LLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~------l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+++..+. .........++..+.++|+|||+++.+.
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9874321 1112456788888889999999988543
No 149
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=6.4e-13 Score=124.32 Aligned_cols=106 Identities=20% Similarity=0.190 Sum_probs=89.1
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+++.++++++.+|+.+. ++.++|
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 182 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDV 182 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSE
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCcc
Confidence 334456778899999999999999999996 5 57999999999 9999999999988867799999999887 555789
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|++++. ....++..+.++|+|||.++..
T Consensus 183 D~V~~~~~--------~~~~~l~~~~~~L~pgG~l~~~ 212 (277)
T 1o54_A 183 DALFLDVP--------DPWNYIDKCWEALKGGGRFATV 212 (277)
T ss_dssp EEEEECCS--------CGGGTHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCc--------CHHHHHHHHHHHcCCCCEEEEE
Confidence 99998642 2346778888999999998853
No 150
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.42 E-value=8.1e-13 Score=119.73 Aligned_cols=102 Identities=19% Similarity=0.188 Sum_probs=83.5
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---CCCCcee
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D 191 (409)
..+.||.+|||+|||+|.++..+|+. | ..+|+|+|+++ |++.+++++... .++..+.+|..... ...+.+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceEE
Confidence 56889999999999999999999994 4 57999999999 999998887654 34888888886643 3457899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+++.. +......++.++.++|||||.++.
T Consensus 150 vVf~d~~-----~~~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 150 GLYADVA-----QPEQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp EEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEecc-----CChhHHHHHHHHHHhccCCCEEEE
Confidence 9997532 335667889999999999999874
No 151
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.42 E-value=2.4e-13 Score=122.52 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=80.5
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc---cCC-CCceeEE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELP-VTKVDII 193 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~~~DvV 193 (409)
...++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++ .++.++.+|+.++ ++. ..+||+|
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 49 LGRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp HHTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred hcCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEE
Confidence 345678999999999999999999866 999999999 99999876 2367888998887 433 3569999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++..+.+ ..++..+++.+.++|||||+++..
T Consensus 121 ~~~~~l~----~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 121 CANFALL----HQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp EEESCCC----SSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred EECchhh----hhhHHHHHHHHHHHhCCCeEEEEE
Confidence 9975433 356778999999999999999854
No 152
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.41 E-value=5.9e-13 Score=139.79 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=91.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcccccc-cCCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEI-ELPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~-~~~~~~~DvVvs~~ 197 (409)
.++++|||+|||+|.+++.+++.|+.+|++||+|+ +++.|++++..|++. ++++++++|+.++ +...++||+|++++
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 47899999999999999999998898999999999 999999999999997 5799999999884 33347899999987
Q ss_pred cccc--------ccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYF--------LLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~--------l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+. .........++..+.++|+|||+++.+
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s 656 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 656 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4321 222345678888999999999999854
No 153
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.41 E-value=4.9e-13 Score=131.69 Aligned_cols=109 Identities=24% Similarity=0.211 Sum_probs=90.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----CCCceeEEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVDIIIS 195 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~DvVvs 195 (409)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+|+ +++.|++++..+++.++++++++|+.+... ..++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 37889999999999999999998888999999999 999999999999997679999999987642 2468999999
Q ss_pred ecccccccC------hhHHHHHHHHHHhcccCCeEEEccC
Q 015306 196 EWMGYFLLF------ENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 196 ~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
++..+.... ......++..+.++|+|||.++...
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 335 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 874322111 1345678888899999999988543
No 154
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.41 E-value=7.4e-13 Score=120.95 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=81.0
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH------cCCCCcEEEEEccccc-cc--CCCC
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA------NGFSNVITVLKGKIEE-IE--LPVT 188 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~------~~~~~~i~~~~~d~~~-~~--~~~~ 188 (409)
..++.+|||||||+|.++..+|+. +...|+|||+|+ +++.|++++.. .++ .++.++++|+.+ ++ ++.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCc
Confidence 356679999999999999999985 466999999999 99999988764 345 459999999987 55 6678
Q ss_pred ceeEEEEeccccccc--Chh---HHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLL--FEN---MLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~--~~~---~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++|.|++........ +.. ..+.++..+.++|||||.++..
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 999998753211110 000 0147899999999999998853
No 155
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.41 E-value=2e-13 Score=123.75 Aligned_cols=90 Identities=18% Similarity=0.122 Sum_probs=76.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc-ccccCC-CCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI-EEIELP-VTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~~DvVvs~~ 197 (409)
.++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++ . .+++++++|+ ..++++ +++||+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN-----A-PHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH-----C-TTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh-----C-CCceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 6788999999999999999999865 999999999 99999987 1 3589999999 556666 68999999862
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.+..++..+.++|||||.++
T Consensus 120 ---------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ---------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---------CCSGGGGGHHHHEEEEEEEE
T ss_pred ---------CHHHHHHHHHHHcCCCcEEE
Confidence 33466778889999999998
No 156
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=8.4e-13 Score=123.42 Aligned_cols=112 Identities=16% Similarity=0.092 Sum_probs=89.8
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----CCCcee
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVD 191 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D 191 (409)
...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.+++++..+++. +++++++|+.++.. ..++||
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCC
Confidence 3568899999999999999999983 447999999999 999999999999986 59999999988764 247899
Q ss_pred EEEEeccccccc---------------ChhHHHHHHHHHHhcccCCeEEEccCCc
Q 015306 192 IIISEWMGYFLL---------------FENMLNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 192 vVvs~~~~~~l~---------------~~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
+|++++..+... .......++..+.++|||||+++.++++
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 999985432211 0123467889999999999999865543
No 157
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.40 E-value=1.2e-12 Score=122.38 Aligned_cols=108 Identities=28% Similarity=0.357 Sum_probs=89.0
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHc-C-CCCcEEEEEcccccccCCC
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEAN-G-FSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~-~-~~~~i~~~~~d~~~~~~~~ 187 (409)
.+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+ + +.++++++.+|+.+..++.
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~ 169 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD 169 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCC
Confidence 3444456778899999999999999999984 3 56999999999 999999999887 4 4467999999999987766
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++||+|+++.. .+..++..+.++|+|||.++..
T Consensus 170 ~~~D~v~~~~~--------~~~~~l~~~~~~L~pgG~l~~~ 202 (280)
T 1i9g_A 170 GSVDRAVLDML--------APWEVLDAVSRLLVAGGVLMVY 202 (280)
T ss_dssp TCEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEECCc--------CHHHHHHHHHHhCCCCCEEEEE
Confidence 88999998542 2336788889999999998853
No 158
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.40 E-value=1.3e-12 Score=119.64 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=88.0
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
+.......++.+|||+|||+|.++..+++. ..+|+++|+++ +++.|+++....++.++++++.+|+.+..++.++||+
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 161 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHA 161 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSE
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccE
Confidence 334455678899999999999999999998 66999999999 9999999999988877799999999886535578999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|++++. .+..++..+.++|+|||.++.
T Consensus 162 v~~~~~--------~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 162 AFVDVR--------EPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp EEECSS--------CGGGGHHHHHHHBCTTCEEEE
T ss_pred EEECCc--------CHHHHHHHHHHHcCCCCEEEE
Confidence 998532 334567888899999999885
No 159
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.40 E-value=1.2e-12 Score=124.82 Aligned_cols=113 Identities=15% Similarity=0.095 Sum_probs=89.7
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
....++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.+++++..+++.+ ++++++|+.++....++||+|+
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~-v~~~~~D~~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLN-VILFHSSSLHIGELNVEFDKIL 192 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS-EEEESSCGGGGGGGCCCEEEEE
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCe-EEEEECChhhcccccccCCEEE
Confidence 34578899999999999999999984 346999999999 9999999999999864 9999999998764447899999
Q ss_pred Eeccccc---ccChh----------------HHHHHHHHHHhcccCCeEEEccCCc
Q 015306 195 SEWMGYF---LLFEN----------------MLNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 195 s~~~~~~---l~~~~----------------~~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
+++..+. +...+ ....++..+.++|||||+++.++++
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9754221 11111 1257888999999999999865544
No 160
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.40 E-value=6e-13 Score=122.79 Aligned_cols=106 Identities=18% Similarity=0.139 Sum_probs=78.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc---cCC---CCceeEE
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELP---VTKVDII 193 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~---~~~~DvV 193 (409)
++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|++++..+++.++++++++|+.+. .++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5789999999999999988874 346999999999 9999999999999988899999998763 233 2589999
Q ss_pred EEecccccccCh-h-----------HHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFE-N-----------MLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~-~-----------~~~~~l~~~~~~LkpgG~lip 227 (409)
+++++.+....+ . ....++..+.++|||||.+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 999743222100 0 112456677899999998654
No 161
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.40 E-value=7.3e-13 Score=123.84 Aligned_cols=106 Identities=15% Similarity=0.106 Sum_probs=85.3
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHc-CCCCcEEEEEcccccccCCCC
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEAN-GFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~~ 188 (409)
.+.......++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++..+ +. ++++++.+|+.+ .++++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FISDQ 178 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCCSC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCcCC
Confidence 3444456778899999999999999999986 356999999999 999999999887 75 459999999988 45557
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+||+|++.+ .....+++.+.++|||||+++..
T Consensus 179 ~fD~Vi~~~--------~~~~~~l~~~~~~LkpgG~l~i~ 210 (275)
T 1yb2_A 179 MYDAVIADI--------PDPWNHVQKIASMMKPGSVATFY 210 (275)
T ss_dssp CEEEEEECC--------SCGGGSHHHHHHTEEEEEEEEEE
T ss_pred CccEEEEcC--------cCHHHHHHHHHHHcCCCCEEEEE
Confidence 899999843 23357788899999999998854
No 162
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=6.3e-13 Score=122.37 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-c-C-----CCCce
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E-L-----PVTKV 190 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~~ 190 (409)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. + + +.++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 46789999999999999999995 3 46999999999 9999999999999988899999999774 2 2 14789
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
|+|+++.. ......+++.+.++|||||+++...
T Consensus 158 D~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998642 1346688899999999999998643
No 163
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=8e-13 Score=121.07 Aligned_cols=103 Identities=13% Similarity=-0.021 Sum_probs=84.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC-----CceeE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-----TKVDI 192 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~Dv 192 (409)
...++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++... .+++++++|+.+++... ..||+
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~ 127 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDAN 127 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCE
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc----cCceEEECcccccccccccccccCccE
Confidence 356788999999999999999999877 999999999 99999987621 35999999998875431 24999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|++..+.+++ .......++..+.++|||||+++.
T Consensus 128 v~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i 161 (245)
T 3ggd_A 128 IYMRTGFHHI-PVEKRELLGQSLRILLGKQGAMYL 161 (245)
T ss_dssp EEEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 9998765544 234678999999999999998764
No 164
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.39 E-value=2.2e-12 Score=116.79 Aligned_cols=101 Identities=21% Similarity=0.272 Sum_probs=81.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---CCCCceeE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVDI 192 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~Dv 192 (409)
...++.+|||+|||+|.++..+++. | ..+|+|+|+++ +++.+++++..+ .+++++.+|+.+.. ...++||+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDV 146 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceE
Confidence 4668899999999999999999985 4 46999999999 999999988654 46999999998742 11368999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+++.. .......++..+.++|||||.++.
T Consensus 147 v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 147 IFEDVA-----QPTQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp EEECCC-----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCC-----CHhHHHHHHHHHHHhcCCCCEEEE
Confidence 998653 223344558899999999999884
No 165
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.39 E-value=1.3e-12 Score=119.47 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--C-----CCCce
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--L-----PVTKV 190 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~~~~~ 190 (409)
.++++|||||||+|..++.+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+.. + +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 46789999999999999999985 3 56999999999 99999999999999888999999997752 2 14789
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
|+|+++.. ......+++.+.++|+|||+++...
T Consensus 149 D~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99998631 2456788899999999999998654
No 166
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.39 E-value=2.2e-13 Score=122.66 Aligned_cols=106 Identities=18% Similarity=0.076 Sum_probs=79.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHH----HHcCCCCcEEEEEcccccccCCCCceeEE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIV----EANGFSNVITVLKGKIEEIELPVTKVDII 193 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~----~~~~~~~~i~~~~~d~~~~~~~~~~~DvV 193 (409)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+ |++.+.+.+ ...+++ +++++++|+.+++++.+. |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCCCCCC-CEE
Confidence 4678899999999999999999963 56999999999 998644333 234554 599999999998887666 888
Q ss_pred EEeccccccc--ChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLL--FENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~--~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+......... +..+...++..+.++|||||.++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 7432111110 122337889999999999999885
No 167
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.39 E-value=9.5e-13 Score=120.36 Aligned_cols=102 Identities=22% Similarity=0.281 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-c------------
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E------------ 184 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~------------ 184 (409)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 46789999999999999999995 3 56999999999 9999999999999888899999998763 1
Q ss_pred --CC-C-CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 185 --LP-V-TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 185 --~~-~-~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++ . ++||+|++... ......++..+.++|+|||+++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp TTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 11 1 78999998531 245668889999999999999854
No 168
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.39 E-value=8.5e-13 Score=119.62 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCC----Ccee
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPV----TKVD 191 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~----~~~D 191 (409)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|++++..+++.++++++.+|+.+.. ++. ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 57789999999999999999984 3 56999999999 99999999999998888999999997652 211 6899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+|+++.. ......+++.+.++|+|||+++...
T Consensus 148 ~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 148 VAVVDAD------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEECSC------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9998642 2345678888999999999998643
No 169
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.39 E-value=1.9e-12 Score=134.41 Aligned_cols=105 Identities=15% Similarity=0.098 Sum_probs=85.6
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHc------CCCCcEEEEEcccccccCCCCce
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEAN------GFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~------~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
..++.+|||||||+|.++..+++.+. .+|+|+|+|+ +++.|++++... ++ .+++++++|+.+++++.++|
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sF 797 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDV 797 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCe
Confidence 35889999999999999999999763 6999999999 999999876642 44 36999999999998888899
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+|++..+..++. ......++..+.++|||| .++.
T Consensus 798 DlVV~~eVLeHL~-dp~l~~~L~eI~RvLKPG-~LII 832 (950)
T 3htx_A 798 DIGTCLEVIEHME-EDQACEFGEKVLSLFHPK-LLIV 832 (950)
T ss_dssp CEEEEESCGGGSC-HHHHHHHHHHHHHTTCCS-EEEE
T ss_pred eEEEEeCchhhCC-hHHHHHHHHHHHHHcCCC-EEEE
Confidence 9999976544442 234457889999999999 5553
No 170
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.38 E-value=3.1e-12 Score=119.55 Aligned_cols=104 Identities=14% Similarity=0.157 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCC---ChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----------C
Q 015306 122 KDKVVLDVGAGT---GILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----------L 185 (409)
Q Consensus 122 ~~~~VLDlGcG~---G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----------~ 185 (409)
...+|||||||+ |.++..+++. +..+|+++|+|+ |++.|++++.. .++++++.+|+.+.. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccC
Confidence 457999999999 9888777763 456999999999 99999998843 246999999997632 3
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+..+||+|++..+.+++..+ ....+++++.++|+|||.++...
T Consensus 154 d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence 33589999997765655443 57899999999999999998643
No 171
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=7.4e-12 Score=111.54 Aligned_cols=100 Identities=25% Similarity=0.196 Sum_probs=81.2
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
...++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++..+++ +++++++|+.+++ ++||+|++++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcC
Confidence 3457889999999999999999998877999999999 99999999988887 5999999999863 5899999997
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
+.+ .........+++.+.++| ||.++
T Consensus 121 p~~-~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 121 PFG-SQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp CCS-SSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred CCc-cccCCchHHHHHHHHHhc--CcEEE
Confidence 533 322234456777777887 55443
No 172
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.37 E-value=2.2e-12 Score=117.45 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc----cCCC--Ccee
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----ELPV--TKVD 191 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~--~~~D 191 (409)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|+.+. +..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 46789999999999999999985 3 45999999999 9999999999999888899999998653 1222 6899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+|+++.. ......+++.+.++|+|||+++...
T Consensus 151 ~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 151 LIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEECSC------GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9998642 2456778899999999999998654
No 173
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.37 E-value=5e-12 Score=122.28 Aligned_cols=111 Identities=10% Similarity=0.123 Sum_probs=91.3
Q ss_pred HHhccCCCC-CCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCC
Q 015306 114 IYQNKFLFK-DKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVT 188 (409)
Q Consensus 114 l~~~~~~~~-~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~ 188 (409)
+.......+ +.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+.+ .+ +
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~ 247 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG-G 247 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT-C
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC-C
Confidence 333344455 889999999999999999984 5669999999 7 99999999999998888999999999876 44 6
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.||+|++..+.+.+ .......+++.+.+.|+|||+++.
T Consensus 248 ~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 248 AADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 79999997654433 233457899999999999999874
No 174
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.36 E-value=7.4e-12 Score=121.53 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=90.1
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCcee
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (409)
+.+.....++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+.+++ .+|
T Consensus 182 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~D 258 (359)
T 1x19_A 182 LLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP--EAD 258 (359)
T ss_dssp HHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC--CCS
T ss_pred HHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC--CCC
Confidence 333345667889999999999999999985 4569999999 9 9999999999999888899999999987665 349
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|++..+.+.+. ......+++.+.+.|||||+++.
T Consensus 259 ~v~~~~vlh~~~-d~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 259 AVLFCRILYSAN-EQLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEEEechhccCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 999976543332 23477899999999999999874
No 175
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=2.4e-12 Score=123.87 Aligned_cols=101 Identities=20% Similarity=0.301 Sum_probs=79.3
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHHcC----------CCCcEEEEEcccccc-
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-MANMAKQIVEANG----------FSNVITVLKGKIEEI- 183 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g~-~~V~~vD~s~-~~~~a~~~~~~~~----------~~~~i~~~~~d~~~~- 183 (409)
....++.+|||+|||+|.++..+++. |. .+|+++|+++ +++.|++++...+ +.++++++.+|+.+.
T Consensus 101 l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 101 MDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp HTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 45678999999999999999999995 54 7999999999 9999999988532 235699999999886
Q ss_pred -cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 184 -ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 184 -~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
+++.++||+|+++... ...++..+.++|+|||.++
T Consensus 181 ~~~~~~~fD~V~~~~~~--------~~~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 181 EDIKSLTFDAVALDMLN--------PHVTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp -------EEEEEECSSS--------TTTTHHHHGGGEEEEEEEE
T ss_pred cccCCCCeeEEEECCCC--------HHHHHHHHHHhcCCCcEEE
Confidence 3455689999986431 1236788899999999988
No 176
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=3e-12 Score=117.66 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=82.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHc--------CCCCcEEEEEccccc-cc--CC
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEAN--------GFSNVITVLKGKIEE-IE--LP 186 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~--------~~~~~i~~~~~d~~~-~~--~~ 186 (409)
..++.+|||||||+|.+++.+++.+ ..+|+|||+|+ +++.|++++..+ ++. +++++.+|+.+ ++ ++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhcc
Confidence 3567899999999999999999975 45899999999 999999998876 664 59999999987 44 55
Q ss_pred CCceeEEEEecccccccC-----hhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 VTKVDIIISEWMGYFLLF-----ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+++|.|+.......... ......++..+.++|+|||.++.
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 688999986432111000 00014788899999999999885
No 177
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.36 E-value=4.9e-12 Score=114.40 Aligned_cols=100 Identities=21% Similarity=0.197 Sum_probs=81.0
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEcccccccCCCCceeE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~-g~-~~V~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
..++.+|||||||+|.++..+++. |. .+|+++|+++ +++.|++++..+++ .++++++.+|+.......++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 568899999999999999999985 43 5999999999 99999999988664 34699999999876554578999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|++..... .++..+.++|||||+++..
T Consensus 155 i~~~~~~~---------~~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 155 IHVGAAAP---------VVPQALIDQLKPGGRLILP 181 (226)
T ss_dssp EEECSBBS---------SCCHHHHHTEEEEEEEEEE
T ss_pred EEECCchH---------HHHHHHHHhcCCCcEEEEE
Confidence 99865321 1235677999999998853
No 178
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.36 E-value=1.5e-12 Score=125.60 Aligned_cols=111 Identities=20% Similarity=0.190 Sum_probs=88.1
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
.+.......++.+|||+|||+|.++..+++.+ ..+|+++|+|+ +++.|++++..+++. ++++.+|+.+.. .++|
T Consensus 187 ~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~--~~~f 262 (343)
T 2pjd_A 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV--KGRF 262 (343)
T ss_dssp HHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC--CSCE
T ss_pred HHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc--cCCe
Confidence 33333433456799999999999999999975 34999999999 999999999998875 577889987653 4799
Q ss_pred eEEEEeccccccc--ChhHHHHHHHHHHhcccCCeEEEc
Q 015306 191 DIIISEWMGYFLL--FENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 191 DvVvs~~~~~~l~--~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+|+++++.+... +......++..+.++|||||.++.
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 9999987533211 234567899999999999999874
No 179
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.36 E-value=7.1e-12 Score=120.23 Aligned_cols=106 Identities=17% Similarity=0.239 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||||||+|.++..+++. +..+++++|++.+++.|++++...++.++++++.+|+.+.+++ +.||+|++..+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYG-NDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-SCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCC-CCCcEEEEcchh
Confidence 67789999999999999999985 4569999999998999999999888888899999999887666 459999996553
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++ .......+++.+.++|+|||+++..
T Consensus 243 ~~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 243 HHF-DVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp GGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccC-CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 333 2245578999999999999987743
No 180
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.36 E-value=4.3e-12 Score=123.46 Aligned_cols=104 Identities=18% Similarity=0.164 Sum_probs=87.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc--cCCCCceeEEEEe
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISE 196 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~DvVvs~ 196 (409)
..+.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+. +++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 46689999999999999999984 4669999999 8 9999999998888878899999999986 355 789999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+.+.+ .......+++.+.+.|||||+++.
T Consensus 256 ~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 256 QFLDCF-SEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp SCSTTS-CHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred chhhhC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 654333 234556889999999999999874
No 181
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.36 E-value=9.5e-12 Score=112.88 Aligned_cols=103 Identities=18% Similarity=0.182 Sum_probs=77.5
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---CCCcee
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D 191 (409)
..+.+|.+|||+|||+|.++..+++. | ..+|+|+|+++ +++.+.+..... .++.++.+|+..... ..++||
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceE
Confidence 34788999999999999999999984 4 56999999999 986665555443 359999999986532 136899
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|+++.. . ......+...+.++|||||+++..
T Consensus 149 ~I~~d~a---~--~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 149 VLYVDIA---Q--PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEECCC---C--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecCC---C--hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 9999753 1 233334455666699999999854
No 182
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.36 E-value=7.6e-12 Score=122.00 Aligned_cols=111 Identities=22% Similarity=0.180 Sum_probs=89.0
Q ss_pred HhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 115 YQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 115 ~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
.......++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+ +++ ..||+
T Consensus 175 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~ 251 (374)
T 1qzz_A 175 ADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP-VTADV 251 (374)
T ss_dssp HHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-CCEEE
T ss_pred HHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC-CCCCE
Confidence 33344567889999999999999999985 3569999999 8 999999999999988789999999976 444 45999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
|++..+.+.+. ......+++.+.++|||||+++...
T Consensus 252 v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 252 VLLSFVLLNWS-DEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccccCCC-HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99976544332 2233588999999999999887543
No 183
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=3.4e-12 Score=115.48 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=81.2
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcCC------CEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEccccccc---
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAGA------AHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIE--- 184 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g~------~~V~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~--- 184 (409)
...++.+|||||||+|.++..+++... .+|+++|+++ +++.|++++...++ .++++++.+|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 457889999999999999999999632 5999999999 99999999988873 346999999998854
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...++||+|++...... ++..+.++|||||+++.
T Consensus 157 ~~~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASE---------LPEILVDLLAENGKLII 191 (227)
T ss_dssp HHHHCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEE
Confidence 44578999998653221 23667789999999874
No 184
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.35 E-value=1.6e-12 Score=125.19 Aligned_cols=96 Identities=19% Similarity=0.296 Sum_probs=83.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||+|||+|.+++. ++ ++.+|+|+|+|+ +++.|++++..+++.++++++++|+.++. ++||+|++++..
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 5789999999999999999 88 688999999999 99999999999999778999999999875 789999998642
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+. ..++..+.++|+|||.++..
T Consensus 269 ~~-------~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 269 FA-------HKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp TG-------GGGHHHHHHHEEEEEEEEEE
T ss_pred hH-------HHHHHHHHHHcCCCCEEEEE
Confidence 21 26677788999999998753
No 185
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.35 E-value=1.9e-12 Score=116.74 Aligned_cols=96 Identities=24% Similarity=0.276 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc--ccCCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE--IELPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~~DvVvs~~ 197 (409)
.++.+|||+|||+|.++..+++.| .+|+++|+++ +++.++++. .+++.+|+.+ .++++++||+|++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~ 101 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGD 101 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEES
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECC
Confidence 578899999999999999999986 6999999999 999887643 3688999987 445568999999965
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+ +.+..++..++..+.++|+|||.++..
T Consensus 102 ~---l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 102 V---LEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp C---GGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred h---hhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 4 334456678999999999999998853
No 186
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=2.4e-12 Score=126.06 Aligned_cols=103 Identities=17% Similarity=0.144 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~~ 197 (409)
.+|.+|||+|||+|.+++.+++.|+. |+++|+|+ +++.|++++..+++.+ .+.++|+.++. ++ +.||+|++++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~-~~fD~Ii~dp 288 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLE-GPFHHVLLDP 288 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCC-CCEEEEEECC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhc-CCCCEEEECC
Confidence 46899999999999999999998875 99999999 9999999999999875 46699998763 23 4599999987
Q ss_pred ccccccC-------hhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLF-------ENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~-------~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.. +... ......++..+.++|+|||.++..
T Consensus 289 P~-f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 289 PT-LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp CC-CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred Cc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 43 2211 123467788889999999999844
No 187
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.35 E-value=1.2e-11 Score=120.45 Aligned_cols=112 Identities=15% Similarity=0.156 Sum_probs=90.4
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCce
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (409)
.+.......++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++|+++.+|+. .+++ ..|
T Consensus 193 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p-~~~ 269 (369)
T 3gwz_A 193 QVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIP-DGA 269 (369)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCC-SSC
T ss_pred HHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCC-CCc
Confidence 3444445567789999999999999999984 4569999999 8 99999999999998889999999998 4555 389
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|++..+.+.+. ......+++.+.+.|+|||+++..
T Consensus 270 D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 270 DVYLIKHVLHDWD-DDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp SEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred eEEEhhhhhccCC-HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999976543332 223347899999999999998853
No 188
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.35 E-value=3.5e-12 Score=116.30 Aligned_cols=100 Identities=22% Similarity=0.243 Sum_probs=79.3
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC-CceeEEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TKVDIIIS 195 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~DvVvs 195 (409)
....++.+|||||||+|.++..+++.+..+|+++|+++ +++.|++++...++.+ ++++.+|+ ...++. .+||+|++
T Consensus 87 l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~-~~~~~~~~~fD~Ii~ 164 (235)
T 1jg1_A 87 ANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDG-SKGFPPKAPYDVIIV 164 (235)
T ss_dssp HTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCG-GGCCGGGCCEEEEEE
T ss_pred cCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCc-ccCCCCCCCccEEEE
Confidence 45678889999999999999999995326999999999 9999999999988866 99999998 333332 45999998
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
......+ ...+.+.|+|||+++..
T Consensus 165 ~~~~~~~---------~~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 165 TAGAPKI---------PEPLIEQLKIGGKLIIP 188 (235)
T ss_dssp CSBBSSC---------CHHHHHTEEEEEEEEEE
T ss_pred CCcHHHH---------HHHHHHhcCCCcEEEEE
Confidence 6542222 13567899999998743
No 189
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.35 E-value=1.6e-12 Score=124.63 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=85.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--CC-CCcEEEEEccccccc--CCCCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--GF-SNVITVLKGKIEEIE--LPVTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~DvV 193 (409)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ ..+++++.+|+.+.. .+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 46689999999999999999986 467999999999 999999988652 44 357999999998752 334789999
Q ss_pred EEecccccccChh-HHHHHHHHHHhcccCCeEEEccC
Q 015306 194 ISEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 194 vs~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+++.......... ....+++.+.++|+|||+++...
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9975422111111 13688999999999999998653
No 190
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.35 E-value=1.2e-12 Score=122.73 Aligned_cols=106 Identities=19% Similarity=0.134 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc--CC--------CCcEEEEEcccccccCCCCc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN--GF--------SNVITVLKGKIEEIELPVTK 189 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~--~~--------~~~i~~~~~d~~~~~~~~~~ 189 (409)
.++.+|||||||+|.++..+++.+..+|++||+++ +++.|++++ .. ++ ..+++++.+|+.+.....++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45689999999999999999988777999999999 999999987 33 32 36799999998764211478
Q ss_pred eeEEEEecccccccChhH--HHHHHHHHHhcccCCeEEEcc
Q 015306 190 VDIIISEWMGYFLLFENM--LNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lip~ 228 (409)
||+|+++...... .... ...+++.+.++|+|||+++..
T Consensus 153 fD~Ii~d~~~~~~-~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVG-PAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCCCCC-cchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9999998643211 1111 267889999999999999864
No 191
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.35 E-value=1.9e-12 Score=122.30 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcccccc-cCCCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~~DvVv 194 (409)
..+.+|||||||+|.++..+++. +..+|+++|+++ +++.|++++.. .++ ..+++++.+|+.+. ....++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999999996 678999999999 99999998764 333 35799999998774 33347899999
Q ss_pred EecccccccChh--HHHHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYFLLFEN--MLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
++.......... ....+++.+.++|+|||+++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 975422011001 12578899999999999998653
No 192
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.34 E-value=7.9e-12 Score=119.98 Aligned_cols=105 Identities=19% Similarity=0.053 Sum_probs=87.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.++..+++ .+..+++++|+ + +++.|++++...++.++++++.+|+. .+++ .+||+|++..
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p-~~~D~v~~~~ 243 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLP-AGAGGYVLSA 243 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCC-CSCSEEEEES
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCC-CCCcEEEEeh
Confidence 34568999999999999999988 45669999999 8 99999999999998888999999997 3455 3899999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+.+. ......+++++.+.|+|||+++..
T Consensus 244 vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 244 VLHDWD-DLSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhccCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 544332 233578999999999999998854
No 193
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.34 E-value=1.1e-12 Score=122.77 Aligned_cols=107 Identities=21% Similarity=0.231 Sum_probs=77.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEE-EEccccccc--
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITV-LKGKIEEIE-- 184 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~-~~~d~~~~~-- 184 (409)
.+..++.......++.+|||||||||.++..+++.|+.+|+|||+|+ |++.+.+.- .++.. ...++..+.
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchh
Confidence 34445554444457889999999999999999999989999999999 998854321 22433 234555544
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++..+||+|+++.. +. .+..++.++.++|||||.++.
T Consensus 146 ~l~~~~fD~v~~d~s---f~---sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 146 DFTEGLPSFASIDVS---FI---SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp GCTTCCCSEEEECCS---SS---CGGGTHHHHHHHSCTTCEEEE
T ss_pred hCCCCCCCEEEEEee---Hh---hHHHHHHHHHHHcCcCCEEEE
Confidence 34345999998653 22 236788999999999999874
No 194
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.34 E-value=1.9e-12 Score=126.90 Aligned_cols=106 Identities=21% Similarity=0.191 Sum_probs=87.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----CCCceeEEEEe
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVDIIISE 196 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~DvVvs~ 196 (409)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+ +++.|++++..+++.+ ++++++|+.++.. ..++||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7889999999999999999998 67999999999 9999999999999977 9999999988642 14789999998
Q ss_pred cccccccC------hhHHHHHHHHHHhcccCCeEEEccC
Q 015306 197 WMGYFLLF------ENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 197 ~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+..+.... ......++..+.++|+|||+++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 74322211 1345678888999999999988653
No 195
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.34 E-value=2.2e-12 Score=111.69 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=77.7
Q ss_pred hHhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc
Q 015306 104 VVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE 182 (409)
Q Consensus 104 ~~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~ 182 (409)
+..++.+.+.+... ..++.+|||+|||+|.++..+++.+ +|+|+|+|+ +++. .++++++++|+.+
T Consensus 7 ~~~~~~l~~~l~~~--~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 7 GEDTYTLMDALERE--GLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------HRGGNLVRADLLC 72 (170)
T ss_dssp CHHHHHHHHHHHHH--TCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------CSSSCEEECSTTT
T ss_pred CccHHHHHHHHHhh--cCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------ccCCeEEECChhh
Confidence 34444555554421 2467799999999999999999987 999999999 9877 2458999999988
Q ss_pred ccCCCCceeEEEEecccccccC------hhHHHHHHHHHHhcccCCeEEEc
Q 015306 183 IELPVTKVDIIISEWMGYFLLF------ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 183 ~~~~~~~~DvVvs~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+++.++||+|++++....... ......++..+.+.| |||.++.
T Consensus 73 -~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~ 121 (170)
T 3q87_B 73 -SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYL 121 (170)
T ss_dssp -TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEE
T ss_pred -hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEE
Confidence 444589999999864321111 112235666666777 9999874
No 196
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.34 E-value=1.2e-12 Score=118.79 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecH-H-HHHHH---HHHHHHcCCCCcEEEEEcccccccCC-CCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECS-Q-MANMA---KQIVEANGFSNVITVLKGKIEEIELP-VTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s-~-~~~~a---~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~DvV 193 (409)
.++.+|||||||+|.++..+++ .+..+|+|||+| + |++.| ++++...++. ++.++++|+++++.. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 5788999999999999999997 445689999999 6 77776 7777777775 499999999988532 2556666
Q ss_pred EEeccccccc-C-hhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLL-F-ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~-~-~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++.+...... + ......++.++.++|||||.++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 6543211110 0 01124678999999999999886
No 197
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=4e-12 Score=120.55 Aligned_cols=107 Identities=20% Similarity=0.101 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH---cCCCCcEEEEEcccccccC--CCCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA---NGFSNVITVLKGKIEEIEL--PVTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~---~~~~~~i~~~~~d~~~~~~--~~~~~DvV 193 (409)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++.. .....+++++.+|+.++.. +.++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 46789999999999999999986 467999999999 99999998742 1223579999999988753 35899999
Q ss_pred EEecccccccChhHH--HHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYFLLFENML--NTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lip~ 228 (409)
+++....... ...+ ..+++.+.++|||||+++..
T Consensus 174 i~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 174 IIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9976432211 1111 57889999999999999854
No 198
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.33 E-value=5.1e-12 Score=123.35 Aligned_cols=109 Identities=18% Similarity=0.145 Sum_probs=86.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
....+.... ..++.+|||+|||+|.+++.+++.+. .+|+|+|+|+ +++.|++++..+++.++++++++|+.+++.+.
T Consensus 206 la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~ 284 (373)
T 3tm4_A 206 IANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV 284 (373)
T ss_dssp HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC
T ss_pred HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc
Confidence 334444334 57888999999999999999999764 4899999999 99999999999999778999999999998777
Q ss_pred CceeEEEEeccccccc-C----hhHHHHHHHHHHhcc
Q 015306 188 TKVDIIISEWMGYFLL-F----ENMLNTVLYARDKWL 219 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~-~----~~~~~~~l~~~~~~L 219 (409)
++||+|+++++...-. . +.....+++.+.++|
T Consensus 285 ~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 285 DSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp SCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred CCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 8999999987421111 1 122367788888888
No 199
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.33 E-value=1.8e-12 Score=123.86 Aligned_cols=108 Identities=17% Similarity=0.161 Sum_probs=84.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEccccccc-CCCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEIE-LPVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~~-~~~~~~DvVv 194 (409)
.++.+|||||||+|.++..+++. +..+|+++|+++ +++.|++++.. +++ ..+++++.+|+.+.. ...++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999999986 567999999999 99999998765 233 357999999997742 2347899999
Q ss_pred EecccccccChhHH-HHHHHHHHhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFENML-NTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~~~~-~~~l~~~~~~LkpgG~lip~ 228 (409)
++............ ..+++.+.++|+|||+++..
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 98642211111111 68889999999999999854
No 200
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=3.8e-12 Score=114.65 Aligned_cols=91 Identities=23% Similarity=0.291 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~ 200 (409)
++.+|||||||+|.++..+++. +++|+|+ +++.++++ +++++.+|+.+++++.++||+|++..+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 111 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTT-- 111 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESC--
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcch--
Confidence 4889999999999999887654 9999999 99998876 378999999998877789999999754
Q ss_pred cccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 201 FLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+..++..++..+.++|+|||.++..
T Consensus 112 -l~~~~~~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 112 -ICFVDDPERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp -GGGSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -HhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 333356788999999999999998853
No 201
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.33 E-value=2.8e-12 Score=119.90 Aligned_cols=109 Identities=17% Similarity=0.105 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcccccc-cCCCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~~DvVv 194 (409)
..+++|||||||+|.++..+++. |..+|++||+++ +++.|++++.. +++ .++++++.+|+.+. ....++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35689999999999999999996 678999999999 99999998754 234 35799999998874 33347899999
Q ss_pred EecccccccChh-HHHHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+++......... ....+++.+.++|+|||+++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 976432111000 12578889999999999998653
No 202
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.32 E-value=7.7e-12 Score=116.46 Aligned_cols=106 Identities=18% Similarity=0.217 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCCCh----HHHHHHHc-C----CCEEEEEecHH-HHHHHHHHHHH-----------------------cC
Q 015306 122 KDKVVLDVGAGTGI----LSLFCAKA-G----AAHVYAVECSQ-MANMAKQIVEA-----------------------NG 168 (409)
Q Consensus 122 ~~~~VLDlGcG~G~----l~~~la~~-g----~~~V~~vD~s~-~~~~a~~~~~~-----------------------~~ 168 (409)
++.+|||+|||||. +++.+++. | ..+|+|+|+|+ +++.|++.+.. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999997 67777774 4 23899999999 99999986410 00
Q ss_pred -------CCCcEEEEEcccccccCC-CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 169 -------FSNVITVLKGKIEEIELP-VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 169 -------~~~~i~~~~~d~~~~~~~-~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.++|+|.+.|+.+.+++ .++||+|+|..+..++ .......++..+.+.|+|||.++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 113699999999886554 4789999996544333 3345679999999999999999864
No 203
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.32 E-value=1.5e-12 Score=123.95 Aligned_cols=109 Identities=21% Similarity=0.228 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--CC-CCcEEEEEcccccc-cCCCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--GF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~~DvVv 194 (409)
.++++|||||||+|.++..+++. +..+|+++|+++ +++.|++++... ++ ..+++++.+|+.+. ....++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35689999999999999999986 467999999999 999999988643 33 46799999999874 23347899999
Q ss_pred EecccccccChhHH-HHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYFLLFENML-NTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~l~~~~~~-~~~l~~~~~~LkpgG~lip~~ 229 (409)
++............ ..+++.+.++|+|||+++...
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 97643211111111 688899999999999998654
No 204
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.32 E-value=2e-11 Score=118.45 Aligned_cols=107 Identities=23% Similarity=0.281 Sum_probs=87.1
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs 195 (409)
....++.+|||||||+|.++..+++.+ ..+++++|+ + +++.|++++...++.++++++.+|+.+ .++ ..||+|++
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~ 255 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP-RKADAIIL 255 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-SCEEEEEE
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCC-CCccEEEE
Confidence 345678899999999999999999853 569999999 8 999999999999988789999999976 344 45999999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+.+.+. ......+++.+.++|+|||+++..
T Consensus 256 ~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 256 SFVLLNWP-DHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccccCCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 76543332 233458899999999999998753
No 205
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.32 E-value=1.1e-12 Score=130.05 Aligned_cols=113 Identities=18% Similarity=0.237 Sum_probs=86.9
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEE-EEEcccccccC
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVIT-VLKGKIEEIEL 185 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~-~~~~d~~~~~~ 185 (409)
..+.+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++ ++..... +...+...+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc
Confidence 34555666666667889999999999999999999876 999999999 99998875 3332111 22344555555
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++++||+|++..+ +.+..++..+++.+.++|||||+++..
T Consensus 168 ~~~~fD~I~~~~v---l~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 168 TEGPANVIYAANT---LCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HHCCEEEEEEESC---GGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEEECCh---HHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5689999999655 444468899999999999999999854
No 206
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.31 E-value=4.8e-12 Score=119.92 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcccccc-cCCCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~~DvVv 194 (409)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++.. +++ ..+++++.+|+.+. +...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 46689999999999999999996 467999999999 99999998765 344 46799999999774 33347899999
Q ss_pred EecccccccCh-hHHHHHHHHHHhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFE-NMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
++......... .....+++.+.++|+|||+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence 97643211100 11246788999999999999864
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.31 E-value=3.9e-12 Score=121.24 Aligned_cols=108 Identities=17% Similarity=0.142 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cC-C-CCcEEEEEcccccc-cCCCCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NG-F-SNVITVLKGKIEEI-ELPVTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~--~~-~-~~~i~~~~~d~~~~-~~~~~~~DvV 193 (409)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++.. .+ + ..+++++.+|+.+. ....++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999986 567999999999 99999998764 22 2 35799999999874 3335789999
Q ss_pred EEeccccc-ccC-hhH--HHHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYF-LLF-ENM--LNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~-l~~-~~~--~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++..... ... ... ...+++.+.++|+|||+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 99864322 001 111 368899999999999999864
No 208
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.31 E-value=4.1e-12 Score=120.17 Aligned_cols=104 Identities=12% Similarity=0.179 Sum_probs=81.6
Q ss_pred CEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEeccc
Q 015306 124 KVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEWMG 199 (409)
Q Consensus 124 ~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~~~~ 199 (409)
.+|||||||+|.++..+++ .+..+|++||+++ +++.|++++.... ..+++++.+|+.++. ++.++||+|+++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 4999999999999999999 5556999999999 9999999875432 357999999998863 345789999997533
Q ss_pred ccccChh-HHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFEN-MLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~-~~~~~l~~~~~~LkpgG~lip~ 228 (409)
....... ....+++.+.++|+|||+++..
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 2111111 1267899999999999999854
No 209
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.31 E-value=1e-11 Score=119.30 Aligned_cols=106 Identities=19% Similarity=0.161 Sum_probs=86.7
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs 195 (409)
....+ .+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+ +++ ++||+|++
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~ 239 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLL 239 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEE
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEE
Confidence 33445 89999999999999999984 4569999999 9 999999998877777789999999987 555 78999999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+.+.+ .......+++.+.+.|+|||+++..
T Consensus 240 ~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 240 SRIIGDL-DEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp ESCGGGC-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred chhccCC-CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7654333 2334458999999999999998854
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.31 E-value=3.8e-12 Score=126.70 Aligned_cols=111 Identities=15% Similarity=0.050 Sum_probs=88.8
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CCCCceeEEE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIII 194 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~DvVv 194 (409)
...++.+|||+|||+|..+..+++. + ..+|+|+|+++ +++.+++++..+|+. +.++++|+.++. ...++||+|+
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEE
Confidence 4568899999999999999999984 3 46999999999 999999999999986 999999998875 2348899999
Q ss_pred Eecccccc---cC-h---------------hHHHHHHHHHHhcccCCeEEEccCCc
Q 015306 195 SEWMGYFL---LF-E---------------NMLNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 195 s~~~~~~l---~~-~---------------~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
+++..... .. . .....++..+.++|||||+++.++++
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 87542211 00 0 11267888999999999999976654
No 211
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.30 E-value=1.2e-11 Score=120.77 Aligned_cols=100 Identities=11% Similarity=0.173 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc-ccC-CCCceeEEEE
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IEL-PVTKVDIIIS 195 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~~DvVvs 195 (409)
..++.+|||+| |+|.+++.+++.+. .+|+++|+++ +++.|++++..+++. +++++.+|+.+ ++. ..++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34688999999 99999999999765 7999999999 999999999999986 69999999988 543 2368999999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEE
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIV 225 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 225 (409)
+++.. . .....++..+.++|||||.+
T Consensus 248 ~~p~~-~---~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 248 DPPET-L---EAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CCCSS-H---HHHHHHHHHHHHTBCSTTCE
T ss_pred CCCCc-h---HHHHHHHHHHHHHcccCCeE
Confidence 87421 1 12578899999999999943
No 212
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.30 E-value=4.7e-12 Score=119.34 Aligned_cols=107 Identities=16% Similarity=0.199 Sum_probs=81.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcC---C-CCcEEEEEccccccc-CCCCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANG---F-SNVITVLKGKIEEIE-LPVTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~---~-~~~i~~~~~d~~~~~-~~~~~~DvV 193 (409)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++...+ + ..+++++.+|+.+.. ...++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45689999999999999999996 577999999999 9999999987542 2 347999999987753 335789999
Q ss_pred EEecccccccChhHH--HHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYFLLFENML--NTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lip~ 228 (409)
+++....... ...+ ..+++.+.+.|+|||+++..
T Consensus 162 i~D~~~p~~~-~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 162 ISDCTDPIGP-GESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCccCc-chhccHHHHHHHHHHhcCCCCEEEEe
Confidence 9976432211 1112 67889999999999999854
No 213
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=8.4e-12 Score=117.26 Aligned_cols=85 Identities=25% Similarity=0.338 Sum_probs=71.4
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCc
Q 015306 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (409)
Q Consensus 111 ~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (409)
.+.|.......++.+|||||||+|.++..+++.+. +|+|+|+++ +++.+++++...++.++++++++|+.+++++ +
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~ 93 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--F 93 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--C
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--h
Confidence 33444445567889999999999999999999855 999999999 9999999987776656799999999987664 7
Q ss_pred eeEEEEecc
Q 015306 190 VDIIISEWM 198 (409)
Q Consensus 190 ~DvVvs~~~ 198 (409)
||+|++++.
T Consensus 94 fD~vv~nlp 102 (285)
T 1zq9_A 94 FDTCVANLP 102 (285)
T ss_dssp CSEEEEECC
T ss_pred hcEEEEecC
Confidence 999999864
No 214
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.29 E-value=2.3e-12 Score=117.76 Aligned_cols=97 Identities=9% Similarity=0.104 Sum_probs=77.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-----CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc---cC-CCCcee
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-----GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---EL-PVTKVD 191 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-----g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~-~~~~~D 191 (409)
++.+|||||||+|..+..+++. +..+|+|||+++ +++.|+ ++.++++++++|+.+. +. ...+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCC
Confidence 5679999999999999999986 356999999999 998887 2235699999999884 43 324799
Q ss_pred EEEEecccccccChhHHHHHHHHHHh-cccCCeEEEccCC
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDK-WLVDDGIVLPDKA 230 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~-~LkpgG~lip~~~ 230 (409)
+|+++.. + .....++.++.+ +|||||+++....
T Consensus 155 ~I~~d~~-----~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA-----H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS-----C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc-----h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998653 1 245678888887 9999999997654
No 215
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.29 E-value=1e-11 Score=112.44 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=78.4
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHH-cCC------CEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEcccccccCC
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAK-AGA------AHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIELP 186 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~-~g~------~~V~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~ 186 (409)
...++.+|||||||+|.++..+++ .+. .+|+++|+++ +++.|++++...++ ..+++++.+|+.+ .++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC
Confidence 356788999999999999999998 443 5999999999 99999999887651 1459999999987 333
Q ss_pred -CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 -VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 -~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.++||+|++...... +...+.+.|||||+++.
T Consensus 160 ~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPD---------TPTELINQLASGGRLIV 192 (227)
T ss_dssp GGCSEEEEEECSCBSS---------CCHHHHHTEEEEEEEEE
T ss_pred cCCCccEEEECCchHH---------HHHHHHHHhcCCCEEEE
Confidence 378999998654222 12567799999999874
No 216
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.29 E-value=1.5e-11 Score=108.98 Aligned_cols=90 Identities=20% Similarity=0.124 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++. +++++++|+.+++ ++||+|+++++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~p 119 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNPP 119 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECCC
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECCC
Confidence 457889999999999999999998877999999999 9999998864 4899999999864 78999999876
Q ss_pred cccccChhHHHHHHHHHHhcc
Q 015306 199 GYFLLFENMLNTVLYARDKWL 219 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~L 219 (409)
.+.... .....++..+.+.|
T Consensus 120 ~~~~~~-~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVK-HSDRAFIDKAFETS 139 (200)
T ss_dssp C--------CHHHHHHHHHHE
T ss_pred chhccC-chhHHHHHHHHHhc
Confidence 444332 22346777777777
No 217
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.28 E-value=4.7e-12 Score=130.35 Aligned_cols=99 Identities=24% Similarity=0.242 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVvs~~ 197 (409)
..+.+|||||||.|.++..+|+.|+ .|+|||+++ +++.|+..+...+.. +|++.+++++++. +.+++||+|+|.-
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECc
Confidence 4567999999999999999999988 899999999 999999999888753 3999999999983 4557999999965
Q ss_pred ccccccChhHHHHH--HHHHHhcccCCeE
Q 015306 198 MGYFLLFENMLNTV--LYARDKWLVDDGI 224 (409)
Q Consensus 198 ~~~~l~~~~~~~~~--l~~~~~~LkpgG~ 224 (409)
+.+++ .++..+ +.++.+.|+++|.
T Consensus 143 ~~ehv---~~~~~~~~~~~~~~tl~~~~~ 168 (569)
T 4azs_A 143 VFHHI---VHLHGIDEVKRLLSRLADVTQ 168 (569)
T ss_dssp CHHHH---HHHHCHHHHHHHHHHHHHHSS
T ss_pred chhcC---CCHHHHHHHHHHHHHhccccc
Confidence 54433 333322 2234455666654
No 218
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.27 E-value=7.8e-12 Score=124.33 Aligned_cols=113 Identities=19% Similarity=0.071 Sum_probs=89.6
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CCCCceeEEE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIII 194 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~DvVv 194 (409)
...++.+|||+|||+|..+..+|+. +..+|+|+|+++ +++.+++++..+|+.+ +.++++|+.++. ...++||+|+
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n-v~v~~~Da~~l~~~~~~~FD~Il 180 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN-AIVTNHAPAELVPHFSGFFDRIV 180 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS-EEEECCCHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeCCHHHhhhhccccCCEEE
Confidence 4578899999999999999999984 356999999999 9999999999999965 999999998875 2247899999
Q ss_pred Eecccccc---cChh----------------HHHHHHHHHHhcccCCeEEEccCCce
Q 015306 195 SEWMGYFL---LFEN----------------MLNTVLYARDKWLVDDGIVLPDKASL 232 (409)
Q Consensus 195 s~~~~~~l---~~~~----------------~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (409)
+++..+.. ...+ ....++..+.++|||||+++.+++++
T Consensus 181 ~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 181 VDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 98642211 1111 12377888899999999999766553
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.27 E-value=1.5e-11 Score=115.44 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcC--C-CCcEEEEEccccccc-CCCCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANG--F-SNVITVLKGKIEEIE-LPVTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~~-~~~~~~DvVv 194 (409)
.++++|||||||+|.++..+++. +..+|+++|+++ +++.|++++...+ + ..+++++.+|+.+.. ...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 46689999999999999999986 467999999999 9999999876432 2 357999999998753 2247899999
Q ss_pred EecccccccChhHH--HHHHHHHHhcccCCeEEEccC
Q 015306 195 SEWMGYFLLFENML--NTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 195 s~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lip~~ 229 (409)
++...... ....+ ..+++.+.++|+|||+++...
T Consensus 157 ~d~~~~~~-~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIG-PAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTT-GGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCC-cchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 97643221 11222 688999999999999998653
No 220
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.27 E-value=1e-11 Score=107.04 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=77.6
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHc-CC-CEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEccccccc-------
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE------- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~-~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------- 184 (409)
+.......++.+|||+|||+|.++..+++. |. .+|+++|++++++ . .+++++.+|+.+.+
T Consensus 14 ~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----------~-~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 14 QQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----------I-VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp HHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----------C-TTEEEEESCTTSHHHHHHHHH
T ss_pred HHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----------c-CcEEEEEcccccchhhhhhhc
Confidence 333344678889999999999999999996 53 6999999998211 1 35999999998876
Q ss_pred -CCCCceeEEEEecccccccCh--hH------HHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFE--NM------LNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~--~~------~~~~l~~~~~~LkpgG~lip 227 (409)
++.++||+|+++...+..... .. ...++..+.++|+|||.++.
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 566799999997653333221 11 15788999999999999884
No 221
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.26 E-value=1.8e-11 Score=122.92 Aligned_cols=109 Identities=14% Similarity=0.041 Sum_probs=87.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-CCCceeEEEEec
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-PVTKVDIIISEW 197 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~DvVvs~~ 197 (409)
++.+|||+|||+|..+..+++. + ..+|+|+|+++ +++.+++++..+|+.+ ++++++|+.++.. ..++||+|++++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~n-v~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISN-VALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCS-EEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEeCCHHHhhhhccccCCEEEECC
Confidence 8899999999999999999984 3 46999999999 9999999999999864 9999999988753 347899999975
Q ss_pred ccccc---c-Ch---------------hHHHHHHHHHHhcccCCeEEEccCCc
Q 015306 198 MGYFL---L-FE---------------NMLNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 198 ~~~~l---~-~~---------------~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
..+.. . +. .....++..+.++|||||+++.++++
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 42211 1 10 11246788889999999999976554
No 222
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.26 E-value=2.5e-11 Score=121.31 Aligned_cols=113 Identities=14% Similarity=0.084 Sum_probs=89.4
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDI 192 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g~-~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~Dv 192 (409)
....++.+|||+|||+|..+..+++. +. .+|+|+|+++ +++.+++++...|+.+ ++++++|+.++. +++++||+
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCS-EEEECSCTTCCSSSSCSSCEEE
T ss_pred cCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCc-EEEEEcChhhcchhhccCCCCE
Confidence 34578899999999999999999984 33 6999999999 9999999999999864 999999998876 44478999
Q ss_pred EEEecccccc---cChhH----------------HHHHHHHHHhcccCCeEEEccCCc
Q 015306 193 IISEWMGYFL---LFENM----------------LNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 193 Vvs~~~~~~l---~~~~~----------------~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
|++++..+.. ...++ ...++..+.++|||||+++..+++
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9987532221 11111 157788999999999999865544
No 223
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.26 E-value=1.2e-11 Score=109.63 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=73.5
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-C--CCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEccccccc----------
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G--AAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE---------- 184 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g--~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------- 184 (409)
....++.+|||||||+|.++..+++. + ..+|+|+|+|++. .. .+++++++|+.+..
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~-~~v~~~~~d~~~~~~~~~~~~~~i 86 (201)
T 2plw_A 18 LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PI-PNVYFIQGEIGKDNMNNIKNINYI 86 (201)
T ss_dssp CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CC-TTCEEEECCTTTTSSCCC------
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CC-CCceEEEccccchhhhhhcccccc
Confidence 33567889999999999999999985 4 4699999999921 12 34899999998875
Q ss_pred ---------------CCCCceeEEEEecccccccC-hhH-------HHHHHHHHHhcccCCeEEEc
Q 015306 185 ---------------LPVTKVDIIISEWMGYFLLF-ENM-------LNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ---------------~~~~~~DvVvs~~~~~~l~~-~~~-------~~~~l~~~~~~LkpgG~lip 227 (409)
++.++||+|+++...+.... ..+ ...++..+.++|||||.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 87 DNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp -----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 45578999999764332110 011 12477888999999999884
No 224
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.25 E-value=2e-12 Score=117.79 Aligned_cols=106 Identities=17% Similarity=0.181 Sum_probs=71.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEE-Eccccccc---
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVL-KGKIEEIE--- 184 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~--- 184 (409)
+.++|.......++.+|||||||+|.++..+++.|+.+|+|+|+|+ |++.|+++... +... ..++..+.
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~------~~~~~~~~~~~~~~~~ 98 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER------VVVMEQFNFRNAVLAD 98 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT------EEEECSCCGGGCCGGG
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc------ccccccceEEEeCHhH
Confidence 4444554444456789999999999999999999878999999999 99987764321 2221 11222211
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++...+|.+.++.+... +..++.++.++|||||.++.
T Consensus 99 ~~~~~~d~~~~D~v~~~------l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 99 FEQGRPSFTSIDVSFIS------LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CCSCCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEE
T ss_pred cCcCCCCEEEEEEEhhh------HHHHHHHHHHhccCCCEEEE
Confidence 22123565555432111 25788999999999999885
No 225
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=1.8e-11 Score=113.71 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=76.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
.++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++. .++.++.+|+.++++++++||+|++...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 57889999999999999999996 345999999999 999998764 2478999999998877789999998542
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+..+.++|||||.++.
T Consensus 158 ----------~~~l~~~~~~L~pgG~l~~ 176 (269)
T 1p91_A 158 ----------PCKAEELARVVKPGGWVIT 176 (269)
T ss_dssp ----------CCCHHHHHHHEEEEEEEEE
T ss_pred ----------hhhHHHHHHhcCCCcEEEE
Confidence 1236778899999999884
No 226
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.24 E-value=2.2e-11 Score=107.51 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=74.8
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCC-----
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELP----- 186 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~----- 186 (409)
+.+.+.....++.+|||||||+|.++..+++. ..+|+|+|++++ ..+ .+++++++|+.+....
T Consensus 15 ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~----------~~~-~~v~~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 15 FLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM----------EEI-AGVRFIRCDIFKETIFDDIDR 82 (191)
T ss_dssp HHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC----------CCC-TTCEEEECCTTSSSHHHHHHH
T ss_pred HHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc----------ccC-CCeEEEEccccCHHHHHHHHH
Confidence 33333344578899999999999999999998 559999999982 112 3589999999876421
Q ss_pred ------CCceeEEEEecccccccC--------hhHHHHHHHHHHhcccCCeEEE
Q 015306 187 ------VTKVDIIISEWMGYFLLF--------ENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 187 ------~~~~DvVvs~~~~~~l~~--------~~~~~~~l~~~~~~LkpgG~li 226 (409)
.++||+|++++....... ......++..+.++|||||.++
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp HHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 148999999864322111 1123567778889999999988
No 227
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.24 E-value=2.6e-11 Score=118.63 Aligned_cols=117 Identities=14% Similarity=0.146 Sum_probs=93.1
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCC---------------------------------------CEE
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA---------------------------------------AHV 148 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~---------------------------------------~~V 148 (409)
+.+..+|.......++.+|||+|||+|.+++.++..+. .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34666666667777889999999999999999988542 479
Q ss_pred EEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccccc--ccChhHHHHHHHHHHhcccC--Ce
Q 015306 149 YAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYF--LLFENMLNTVLYARDKWLVD--DG 223 (409)
Q Consensus 149 ~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~--l~~~~~~~~~l~~~~~~Lkp--gG 223 (409)
+|+|+++ +++.|++++..+++.+.|++.++|+.++..+ .+||+|++++. |. +.....+..+...+.+.||+ ||
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPP-yg~rl~~~~~l~~ly~~lg~~lk~~~g~ 338 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPP-YGERLEDKDSVKQLYKELGYAFRKLKNW 338 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHTSBSC
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCC-CcCccCCHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999 9999999999999987899999999998765 69999999974 32 22234566777777777775 55
Q ss_pred EEE
Q 015306 224 IVL 226 (409)
Q Consensus 224 ~li 226 (409)
.+.
T Consensus 339 ~~~ 341 (385)
T 3ldu_A 339 SYY 341 (385)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 228
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.23 E-value=5.5e-11 Score=116.04 Aligned_cols=118 Identities=15% Similarity=0.219 Sum_probs=94.3
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCC---------------------------------------CEE
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA---------------------------------------AHV 148 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~---------------------------------------~~V 148 (409)
+.+..++.......++..|||++||+|.+++.++..+. .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 34566666666777889999999999999999998533 359
Q ss_pred EEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc-cccccChhHHHHHHHHHHhcccC--CeE
Q 015306 149 YAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM-GYFLLFENMLNTVLYARDKWLVD--DGI 224 (409)
Q Consensus 149 ~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~-~~~l~~~~~~~~~l~~~~~~Lkp--gG~ 224 (409)
+|+|+++ +++.|++++..+|+.+.++++++|+.++..+ .+||+|++++. +.-+..+..+..+...+.+.||+ ||.
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 9999999 9999999999999988899999999998766 68999999974 22233345677777777777775 665
Q ss_pred EE
Q 015306 225 VL 226 (409)
Q Consensus 225 li 226 (409)
+.
T Consensus 339 ~~ 340 (384)
T 3ldg_A 339 QF 340 (384)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 229
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.23 E-value=5.5e-11 Score=106.98 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||||||+|.+++.+. +..+|+|+|+++ +++.+++++..++. ...+..+|....+++ +++|+|++..+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~-~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPA-EAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCC-CBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCC-CCcchHHHHHHH
Confidence 567899999999999999888 777999999999 99999999998884 389999999888777 799999997665
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
+++.+...- ..+ ++...|+++|++|
T Consensus 179 h~LE~q~~~-~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 179 PLLEREQAG-SAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp HHHHHHSTT-HHH-HHHHHCBCSEEEE
T ss_pred HHhhhhchh-hHH-HHHHHhcCCCEEE
Confidence 656443322 233 5567899999987
No 230
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.22 E-value=7.2e-11 Score=116.86 Aligned_cols=98 Identities=18% Similarity=0.227 Sum_probs=79.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
..++.+|||+|||+|.+++.+++. ..+|+|+|+|+ +++.|++++..+++. ++++.+|+.++.. .+||+|++++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~--~~fD~Vv~dPP 362 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV--KGFDTVIVDPP 362 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC--TTCSEEEECCC
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc--cCCCEEEEcCC
Confidence 467889999999999999999997 45999999999 999999999999985 9999999998743 38999999874
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
-. +..+.+++.+. .|+|+|+++.+
T Consensus 363 r~-----g~~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 363 RA-----GLHPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp TT-----CSCHHHHHHHH-HHCCSEEEEEE
T ss_pred cc-----chHHHHHHHHH-hcCCCcEEEEE
Confidence 22 12234555553 48999998754
No 231
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.22 E-value=3.4e-11 Score=117.98 Aligned_cols=117 Identities=13% Similarity=0.140 Sum_probs=92.1
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCC---------------------------------------CEE
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA---------------------------------------AHV 148 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~---------------------------------------~~V 148 (409)
+.+..++.......++..|||++||+|.+++.++..+. .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 34556666666777889999999999999999998533 359
Q ss_pred EEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccccc--cChhHHHHHHHHHHhcccC--Ce
Q 015306 149 YAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFL--LFENMLNTVLYARDKWLVD--DG 223 (409)
Q Consensus 149 ~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l--~~~~~~~~~l~~~~~~Lkp--gG 223 (409)
+|+|+++ +++.|++++..+|+.++++++++|+.+++.+ .+||+|+++++ |.. .....+..+...+.+.||+ ||
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPP-Yg~rl~~~~~l~~ly~~lg~~lk~~~g~ 344 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPP-YGERLEDEEAVRQLYREMGIVYKRMPTW 344 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCC-CccccCCchhHHHHHHHHHHHHhcCCCC
Confidence 9999999 9999999999999988899999999998766 69999999974 322 2224456666666666665 66
Q ss_pred EEE
Q 015306 224 IVL 226 (409)
Q Consensus 224 ~li 226 (409)
.+.
T Consensus 345 ~~~ 347 (393)
T 3k0b_A 345 SVY 347 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 232
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.22 E-value=3.3e-11 Score=106.23 Aligned_cols=98 Identities=24% Similarity=0.258 Sum_probs=72.8
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-CC---------CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEE-Eccccccc-
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA---------AHVYAVECSQ-MANMAKQIVEANGFSNVITVL-KGKIEEIE- 184 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g~---------~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~- 184 (409)
..+.++.+|||||||+|.++..+++. |. .+|+|+|+++ . .+ .+++++ .+|+.+..
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 18 QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRT 85 (196)
T ss_dssp CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHH
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHH
Confidence 34567899999999999999999995 64 7999999998 3 12 348888 88887653
Q ss_pred -------CCCCceeEEEEecccccccCh-hHH-------HHHHHHHHhcccCCeEEEc
Q 015306 185 -------LPVTKVDIIISEWMGYFLLFE-NML-------NTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -------~~~~~~DvVvs~~~~~~l~~~-~~~-------~~~l~~~~~~LkpgG~lip 227 (409)
++.++||+|+++...+...+. .+. ..++..+.++|||||.++.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLC 143 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 234689999997533322111 111 4778889999999999984
No 233
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.22 E-value=3.8e-11 Score=113.54 Aligned_cols=81 Identities=21% Similarity=0.315 Sum_probs=65.1
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
+.......++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.|++++..+++ ++++++++|+.++++ ++||+
T Consensus 34 i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~--~~~D~ 109 (299)
T 2h1r_A 34 IIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF--PKFDV 109 (299)
T ss_dssp HHHHHCCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--CCCSE
T ss_pred HHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--ccCCE
Confidence 3333445788999999999999999999984 4999999999 99999999988777 459999999988765 48999
Q ss_pred EEEecc
Q 015306 193 IISEWM 198 (409)
Q Consensus 193 Vvs~~~ 198 (409)
|++++.
T Consensus 110 Vv~n~p 115 (299)
T 2h1r_A 110 CTANIP 115 (299)
T ss_dssp EEEECC
T ss_pred EEEcCC
Confidence 999864
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.21 E-value=4.3e-11 Score=118.99 Aligned_cols=111 Identities=17% Similarity=0.054 Sum_probs=88.2
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CCCCceeEEE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIII 194 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~DvVv 194 (409)
...++.+|||+|||+|..+..+++.+ ..+|+|+|+++ +++.+++++..+++. ++++++|+.++. ++.++||+|+
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhchhhcccCCCCEEE
Confidence 45788999999999999999999954 36999999999 999999999998874 789999998875 4457899999
Q ss_pred Eecccccc---cChh---------H-------HHHHHHHHHhcccCCeEEEccCCc
Q 015306 195 SEWMGYFL---LFEN---------M-------LNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 195 s~~~~~~l---~~~~---------~-------~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
+++..+.. ...+ . ...++..+.++|||||+++.++++
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 97542211 1111 1 147788899999999999966544
No 235
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.21 E-value=2.7e-11 Score=117.16 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=78.9
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCC------CChHHHHHHH-c-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAG------TGILSLFCAK-A-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK 179 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG------~G~l~~~la~-~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d 179 (409)
.|.+.+... ..++.+||||||| +|..++.+++ . +..+|+|||+|+ |.. ...+++++++|
T Consensus 205 ~Ye~lL~~l--~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GD 272 (419)
T 3sso_A 205 HYDRHFRDY--RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGD 272 (419)
T ss_dssp HHHHHHGGG--TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECC
T ss_pred HHHHHHHhh--cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEec
Confidence 444444422 2467899999999 6766776666 3 566999999999 831 12569999999
Q ss_pred cccccCC------CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 180 IEEIELP------VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 180 ~~~~~~~------~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+.++++. .++||+|+++.. ++......++.++.++|||||+++...
T Consensus 273 a~dlpf~~~l~~~d~sFDlVisdgs----H~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 273 QNDAEFLDRIARRYGPFDIVIDDGS----HINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEECSC----CCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccccchhhhhhcccCCccEEEECCc----ccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 9997755 589999999642 233567788999999999999998643
No 236
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.20 E-value=1e-10 Score=116.40 Aligned_cols=112 Identities=21% Similarity=0.109 Sum_probs=86.2
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc--
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-- 183 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-- 183 (409)
++.+.+.+.......++.+|||+|||+|.+++.+++. ..+|+|+|+|+ +++.|++++..+++. +++++++|+.+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCS
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhh
Confidence 4455555555455567889999999999999999998 56999999999 999999999999986 599999999883
Q ss_pred --cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 184 --ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 184 --~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+++.++||+|++++.-..+ ..+++.+. -++|+++++.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~------~~~~~~l~-~~~p~~ivyv 387 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA------AGVMQQII-KLEPIRIVYV 387 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC------HHHHHHHH-HHCCSEEEEE
T ss_pred hhhhhcCCCCEEEECCCCccH------HHHHHHHH-hcCCCeEEEE
Confidence 2345689999998753222 13444443 3688887764
No 237
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.20 E-value=2.4e-11 Score=118.47 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCc-EEEEEcccccccC-C-CCceeEEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNV-ITVLKGKIEEIEL-P-VTKVDIII 194 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~-i~~~~~d~~~~~~-~-~~~~DvVv 194 (409)
.++.+|||++||+|.+++.+++. |+.+|+++|+++ +++.+++|++.|++.++ ++++++|+.++.. . .++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999984 668999999999 99999999999999887 9999999977532 1 36899999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++.+ ....++..+.++|+|||+++..
T Consensus 131 lDP~g-------~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 131 LDPFG-------TPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp ECCSS-------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCc-------CHHHHHHHHHHHhCCCCEEEEE
Confidence 98731 2235777778899999987643
No 238
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.20 E-value=3e-11 Score=109.68 Aligned_cols=101 Identities=10% Similarity=0.004 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
.+..+|||||||+|.+++.++.. +..+|+|+|+++ +++.+++++..+|+. .++...|...-+++ +++|++++..+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p~-~~~DvaL~lkt 207 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRLD-EPADVTLLLKT 207 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCCC-SCCSEEEETTC
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCCC-CCcchHHHHHH
Confidence 45779999999999999999885 788999999999 999999999999986 78888888776655 89999999766
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.+++..+.. ...+ .+...|+++|++|
T Consensus 208 i~~Le~q~k-g~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 208 LPCLETQQR-GSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp HHHHHHHST-THHH-HHHHHSSCSEEEE
T ss_pred HHHhhhhhh-HHHH-HHHHHhCCCCEEE
Confidence 555533222 1333 6778899999988
No 239
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.19 E-value=4.3e-12 Score=118.47 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=73.7
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHH-HHcCCCCcEEEE--EcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIV-EANGFSNVITVL--KGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~-~~~~~~~~i~~~--~~d~~~~~~~~~~~DvVv 194 (409)
....++.+|||||||+|.++..+++. .+|+|||+++++..+++.. .......+++++ ++|+.+++ +++||+|+
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 44568899999999999999999998 5899999999322222110 001111258899 99999865 47999999
Q ss_pred EecccccccCh-hHH---HHHHHHHHhcccCCe--EEEc
Q 015306 195 SEWMGYFLLFE-NML---NTVLYARDKWLVDDG--IVLP 227 (409)
Q Consensus 195 s~~~~~~l~~~-~~~---~~~l~~~~~~LkpgG--~lip 227 (409)
|+.. +..... .+. ..++..+.++||||| .++.
T Consensus 154 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 154 CDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 9865 322221 111 136788889999999 8874
No 240
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.18 E-value=4.3e-12 Score=117.84 Aligned_cols=105 Identities=18% Similarity=0.224 Sum_probs=73.1
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHH-HHcCCCCcEEEE--EcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIV-EANGFSNVITVL--KGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~-~~~~~~~~i~~~--~~d~~~~~~~~~~~DvVv 194 (409)
....++.+|||||||+|.++..+++. .+|+|||+++++..+++.. .......++.++ ++|+.+++ +++||+|+
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 44568899999999999999999998 5899999999322221110 000111158899 89998865 47999999
Q ss_pred EecccccccCh-hHHH---HHHHHHHhcccCCe--EEEc
Q 015306 195 SEWMGYFLLFE-NMLN---TVLYARDKWLVDDG--IVLP 227 (409)
Q Consensus 195 s~~~~~~l~~~-~~~~---~~l~~~~~~LkpgG--~lip 227 (409)
|+.. +...+. .+.. .++..+.++||||| .++.
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 9865 332221 1111 37788889999999 8774
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.18 E-value=6.4e-11 Score=109.36 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=84.6
Q ss_pred HHHHHHHHHhccCC-CCCCEEEEEcCCC---ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc
Q 015306 107 TKSYQNVIYQNKFL-FKDKVVLDVGAGT---GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI 180 (409)
Q Consensus 107 ~~~~~~~l~~~~~~-~~~~~VLDlGcG~---G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~ 180 (409)
+..|.......+.. ....+|||||||+ |.+...+.+ .+..+|++||.|+ |++.|++++...+ ..+++++++|+
T Consensus 62 nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~ 140 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCT
T ss_pred HHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecc
Confidence 34444443333322 2447899999997 444444443 4566999999999 9999999886543 24699999999
Q ss_pred ccccC----C--CCcee-----EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 181 EEIEL----P--VTKVD-----IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 181 ~~~~~----~--~~~~D-----vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.++.. + .+.|| .|+++.+.+++.....+..++..+.+.|+|||+++.+
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 88531 1 13344 5777776666655555778999999999999999864
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.18 E-value=3.5e-11 Score=116.27 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=80.8
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
+.......++.+|||||||+|.++..+++. +..+++++|+++++. +++....++.++++++.+|+. .+++ +||+
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~ 250 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HADV 250 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCSE
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCCCCeEEEecCCC-CCCC--CCcE
Confidence 333345567889999999999999999984 456899999976443 333333456678999999997 3344 8999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|++..+.+.+. ......+++++.++|||||+++..
T Consensus 251 v~~~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 251 HVLKRILHNWG-DEDSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp EEEESCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEehhccCCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99976543332 223368999999999999998853
No 243
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.15 E-value=2.3e-11 Score=112.72 Aligned_cols=96 Identities=17% Similarity=0.020 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcccccccCCCCceeEEEEe
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
..+++|||||||+|.++..+++.+ .+|+++|+++ +++.|++++.. .++ ..+++++.+|..++. ++||+|+++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 356899999999999999998886 8999999999 99999886532 112 257999999998764 789999986
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.. ++..+++.+.+.|+|||+++..
T Consensus 147 ~~--------dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 147 QE--------PDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp SC--------CCHHHHHHHHTTEEEEEEEEEE
T ss_pred CC--------ChHHHHHHHHHhcCCCcEEEEE
Confidence 32 1224888999999999999853
No 244
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.13 E-value=6.8e-11 Score=115.20 Aligned_cols=98 Identities=21% Similarity=0.158 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc---------------CCCCcEEEEEccccccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN---------------GFSNVITVLKGKIEEIE 184 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~---------------~~~~~i~~~~~d~~~~~ 184 (409)
++.+|||+|||+|.+++.+++. |+.+|+++|+++ +++.+++|+..+ ++.+ ++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHH
Confidence 6889999999999999999995 777899999999 999999999999 8865 999999998764
Q ss_pred CC-CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LP-VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~-~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.. .++||+|+.++.+ ....+++.+.+.||+||+++.
T Consensus 126 ~~~~~~fD~I~lDP~~-------~~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 126 AERHRYFHFIDLDPFG-------SPMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp HHSTTCEEEEEECCSS-------CCHHHHHHHHHHEEEEEEEEE
T ss_pred HhccCCCCEEEeCCCC-------CHHHHHHHHHHhcCCCCEEEE
Confidence 21 3689999987642 124677778899999998764
No 245
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.12 E-value=7.8e-11 Score=105.49 Aligned_cols=86 Identities=17% Similarity=0.145 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
..++.+|||||||+|.++..++ .+|+|+|+++. +++++.+|+.++++++++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~- 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLS- 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESC-
T ss_pred cCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehh-
Confidence 3577899999999999988772 58999999982 367899999998887789999999654
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++ ..+..++..+.++|+|||.++..
T Consensus 125 --l~~-~~~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 125 --LMG-TNIRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp --CCS-SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --ccc-cCHHHHHHHHHHhCCCCeEEEEE
Confidence 333 56788999999999999998854
No 246
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.12 E-value=5.1e-11 Score=112.81 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=71.8
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEec----HH-HHHHHHHHHHHcCCCCcEEEEEc-ccccccCCCCcee
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVEC----SQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~----s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D 191 (409)
....++.+|||||||+|.++..+++. .+|+|||+ ++ +++.+. ....+. ++++++++ |+.+++ .++||
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccCC--cCCCC
Confidence 44567899999999999999999998 47999999 45 432211 011111 46999999 888764 47899
Q ss_pred EEEEecccccccChhHH---HHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENML---NTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~---~~~l~~~~~~LkpgG~lip 227 (409)
+|+|++.........+. ..++..+.++|||||.++.
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 99998653311111111 1467778899999998874
No 247
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.12 E-value=1e-10 Score=111.96 Aligned_cols=121 Identities=21% Similarity=0.166 Sum_probs=85.7
Q ss_pred HHHHHHHhccC-CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC---CCC----cEEEEEcc
Q 015306 109 SYQNVIYQNKF-LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG---FSN----VITVLKGK 179 (409)
Q Consensus 109 ~~~~~l~~~~~-~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~---~~~----~i~~~~~d 179 (409)
.|.+.|..... ..++++||+||||+|.++..+++.+..+|++||+++ +++.|++++...+ +++ +++++.+|
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D 253 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 253 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc
Confidence 45555543221 135789999999999999999998878999999999 9999999875321 332 69999999
Q ss_pred cccccC----CCCceeEEEEeccc-cc------ccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 180 IEEIEL----PVTKVDIIISEWMG-YF------LLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 180 ~~~~~~----~~~~~DvVvs~~~~-~~------l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+..+.. ..++||+|++++.. .. +....-...++..+.++|+|||+++.+.
T Consensus 254 a~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 254 CIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 988642 24789999998643 11 1111222333344489999999998553
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.11 E-value=3e-10 Score=106.70 Aligned_cols=85 Identities=28% Similarity=0.430 Sum_probs=71.3
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
+.+.|.......++.+|||||||+|.++..+++. ..+|+|+|+++ +++.+++++... ++++++++|+.+++++..
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcccC
Confidence 3444444456678899999999999999999998 45999999999 999999998732 459999999999887766
Q ss_pred ceeEEEEecc
Q 015306 189 KVDIIISEWM 198 (409)
Q Consensus 189 ~~DvVvs~~~ 198 (409)
+||+|++++.
T Consensus 114 ~fD~Iv~NlP 123 (295)
T 3gru_A 114 DFNKVVANLP 123 (295)
T ss_dssp CCSEEEEECC
T ss_pred CccEEEEeCc
Confidence 8999999863
No 249
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.11 E-value=5.3e-10 Score=102.49 Aligned_cols=84 Identities=18% Similarity=0.268 Sum_probs=67.7
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC-
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV- 187 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~- 187 (409)
+.+.+.......++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.+++++... ++++++++|+.+++++.
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCSS
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcccC
Confidence 44455555666788999999999999999999986 5999999999 999999887532 46999999999988763
Q ss_pred CceeEEEEecc
Q 015306 188 TKVDIIISEWM 198 (409)
Q Consensus 188 ~~~DvVvs~~~ 198 (409)
..| .|++++.
T Consensus 94 ~~~-~vv~nlP 103 (244)
T 1qam_A 94 QSY-KIFGNIP 103 (244)
T ss_dssp CCC-EEEEECC
T ss_pred CCe-EEEEeCC
Confidence 345 5777753
No 250
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.10 E-value=2.6e-10 Score=109.98 Aligned_cols=104 Identities=16% Similarity=0.103 Sum_probs=81.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCC------CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGA------AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~------~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvV 193 (409)
.++.+|||+|||+|.++..+++... .+|+|+|+++ +++.|+.++...++ ++.++++|..... ..++||+|
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-~~~~fD~I 205 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-LVDPVDVV 205 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-CCCCEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-ccCCccEE
Confidence 4678999999999999999988531 5899999999 99999999988887 3889999987643 34789999
Q ss_pred EEecccccccChh---------------HHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFEN---------------MLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~lip 227 (409)
+++++........ ....++..+.+.|+|||+++.
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 9997532221111 112578888899999998763
No 251
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.10 E-value=6.9e-10 Score=105.17 Aligned_cols=111 Identities=11% Similarity=-0.012 Sum_probs=84.1
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC---CceeE
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV---TKVDI 192 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~Dv 192 (409)
...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.+++++..+|+. +++++++|+.++.... .+||.
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccccCCCCE
Confidence 4578899999999999999999983 457999999999 999999999999985 4999999998875321 57999
Q ss_pred EEEecccccc----cC----------hhH-------HHHHHHHHHhcccCCeEEEccCCc
Q 015306 193 IISEWMGYFL----LF----------ENM-------LNTVLYARDKWLVDDGIVLPDKAS 231 (409)
Q Consensus 193 Vvs~~~~~~l----~~----------~~~-------~~~~l~~~~~~LkpgG~lip~~~~ 231 (409)
|++++..... .+ ... ...++....++|+ ||+++.++++
T Consensus 178 Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 178 ILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 9997532211 10 001 1246777777887 9988865554
No 252
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.10 E-value=2e-10 Score=111.91 Aligned_cols=108 Identities=17% Similarity=0.089 Sum_probs=78.9
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-- 184 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 184 (409)
+.+...+...... .+.+|||+|||+|.+++.+|+. +.+|+|+|+++ +++.|++++..+++. +++++.+|+.++.
T Consensus 200 ~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHH
Confidence 3344444433332 3678999999999999999885 56999999999 999999999999995 5999999998753
Q ss_pred CCC--------------CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LPV--------------TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~~--------------~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.. .+||+|+.++.-..+ . ..+.+.|+++|.++.
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~-----~----~~~~~~l~~~g~ivy 324 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSGL-----D----SETEKMVQAYPRILY 324 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC-----C----HHHHHHHTTSSEEEE
T ss_pred HhhccccccccccccccCCCCEEEECcCcccc-----H----HHHHHHHhCCCEEEE
Confidence 221 379999998742211 1 223355668887763
No 253
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.09 E-value=4.8e-10 Score=109.14 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=76.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.++..+++ .+..+++++|+ + +++.|++. .+++++.+|+.+ +++.+ |+|++..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~--D~v~~~~ 269 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPKG--DAIFIKW 269 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC--SEEEEES
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCCC--CEEEEec
Confidence 55678999999999999999998 45669999999 7 88776532 469999999987 56633 9999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+.+ .......+++++++.|||||+++..
T Consensus 270 vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 270 ICHDW-SDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp CGGGB-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhhcC-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 54433 2344568899999999999998754
No 254
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.07 E-value=3.6e-10 Score=111.79 Aligned_cols=99 Identities=13% Similarity=0.023 Sum_probs=75.1
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
....++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.| .+++++++|+.+.... ++||+|+
T Consensus 35 ~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~-~~fD~Ii 103 (421)
T 2ih2_A 35 AEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPG-EAFDLIL 103 (421)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCS-SCEEEEE
T ss_pred hccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCcc-CCCCEEE
Confidence 33345679999999999999999984 456999999999 88776 3489999999887543 7899999
Q ss_pred EecccccccC---------hhH-----------------HHHHHHHHHhcccCCeEEEc
Q 015306 195 SEWMGYFLLF---------ENM-----------------LNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 195 s~~~~~~l~~---------~~~-----------------~~~~l~~~~~~LkpgG~lip 227 (409)
++++...... ... ...++..+.++|+|||+++.
T Consensus 104 ~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 104 GNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp ECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 9874322111 111 12567888899999998763
No 255
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.06 E-value=4.6e-10 Score=109.40 Aligned_cols=97 Identities=16% Similarity=0.105 Sum_probs=76.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.++..+++. +..+++++|+ + +++.|++ . .+++++.+|+.+ +++ . ||+|++..
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~-~-~D~v~~~~ 275 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA-SVP-Q-GDAMILKA 275 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CCC-C-EEEEEEES
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc-CCC-C-CCEEEEec
Confidence 556789999999999999999995 4568999999 7 8887764 1 349999999987 565 3 99999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+++. ......+++.+.++|||||+++..
T Consensus 276 ~lh~~~-d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 276 VCHNWS-DEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp SGGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 543332 122348999999999999998854
No 256
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.06 E-value=6e-10 Score=108.28 Aligned_cols=97 Identities=21% Similarity=0.181 Sum_probs=77.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..+..+|||||||+|.++..+++ .+..+++++|+ + +++.|++. ++++++.+|+.+ +++.+ |+|++..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p~~--D~v~~~~ 267 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVPSG--DTILMKW 267 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC--SEEEEES
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCCCC--CEEEehH
Confidence 56678999999999999999998 45669999999 6 88776542 469999999987 66633 9999876
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+.+ .......+++++++.|||||+++..
T Consensus 268 vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 268 ILHDW-SDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HhccC-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 54333 2345668899999999999998854
No 257
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.06 E-value=1.5e-11 Score=112.93 Aligned_cols=106 Identities=18% Similarity=0.265 Sum_probs=79.4
Q ss_pred HhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC-CceeE
Q 015306 115 YQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TKVDI 192 (409)
Q Consensus 115 ~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~Dv 192 (409)
.+.....++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.|++++. ..++++++++|+.+++++. ++| .
T Consensus 22 ~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 22 IKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp HHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCSSEE-E
T ss_pred HHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccCCCc-E
Confidence 333456688899999999999999999986 6999999999 9999887764 2356999999999987763 688 7
Q ss_pred EEEecccccccChhHHHHHH--------------HHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVL--------------YARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l--------------~~~~~~LkpgG~lip 227 (409)
|++++. |... ...+..++ +.+.++|+|||.+..
T Consensus 97 vv~n~P-y~~~-~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 97 IVGNIP-YHLS-TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp EEEECC-SSSC-HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred EEEeCC-cccc-HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 888763 3332 22333332 457788899887653
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.04 E-value=7.8e-10 Score=102.69 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=72.5
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC-Cce
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TKV 190 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~ 190 (409)
.|.+.....++ +|||||||+|.++..+++.+ .+|+|+|+++ +++.+++++.. .+++++++|+.+++++. ..+
T Consensus 38 ~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 38 RIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGGSCTT
T ss_pred HHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhhccCc
Confidence 34444456778 99999999999999999986 5899999999 99999988752 46999999999988753 268
Q ss_pred eEEEEecccccccChhHHHHHHHH
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYA 214 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~ 214 (409)
|.|++++. |.+ ..+.+..++..
T Consensus 112 ~~iv~NlP-y~i-ss~il~~ll~~ 133 (271)
T 3fut_A 112 SLLVANLP-YHI-ATPLVTRLLKT 133 (271)
T ss_dssp EEEEEEEC-SSC-CHHHHHHHHHH
T ss_pred cEEEecCc-ccc-cHHHHHHHhcC
Confidence 99999974 433 23344444443
No 259
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.03 E-value=1.7e-09 Score=104.55 Aligned_cols=112 Identities=16% Similarity=0.097 Sum_probs=85.5
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCCCCcee
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (409)
.+.......+..+|||||||+|.++..+++ .+..+++..|..++++.|++++...+ .++|+++.+|+.+.+. ..+|
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~--~~~D 246 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL--PEAD 246 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC---CCSEEEEESCTTTSCC--CCCS
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc-cCceeeecCccccCCC--CCce
Confidence 344444556778999999999999999998 56678999998449999998876544 5789999999987544 4589
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|++..+.+... ......+++.+++.|+|||+++..
T Consensus 247 ~~~~~~vlh~~~-d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 247 LYILARVLHDWA-DGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEEEESSGGGSC-HHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEeeeecccCC-HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 999876544332 234568899999999999998753
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=6.8e-10 Score=102.29 Aligned_cols=82 Identities=12% Similarity=0.234 Sum_probs=67.0
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC----
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---- 186 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---- 186 (409)
+.|.......++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.+++++.. .++++++++|+.+++++
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhcc
Confidence 334444556788999999999999999999986 5999999999 99999998864 24699999999998764
Q ss_pred CCceeEEEEecc
Q 015306 187 VTKVDIIISEWM 198 (409)
Q Consensus 187 ~~~~DvVvs~~~ 198 (409)
.++|| ||+++.
T Consensus 95 ~~~~~-vv~NlP 105 (255)
T 3tqs_A 95 DKPLR-VVGNLP 105 (255)
T ss_dssp SSCEE-EEEECC
T ss_pred CCCeE-EEecCC
Confidence 25688 788763
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.01 E-value=4.9e-10 Score=111.83 Aligned_cols=115 Identities=17% Similarity=0.021 Sum_probs=86.4
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc--------------CCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEE
Q 015306 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--------------GAAHVYAVECSQ-MANMAKQIVEANGFSN-VIT 174 (409)
Q Consensus 111 ~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~--------------g~~~V~~vD~s~-~~~~a~~~~~~~~~~~-~i~ 174 (409)
.+.+.+.....++.+|||+|||+|.+...+++. ...+++|+|+++ +++.|+.++...++.. .+.
T Consensus 160 ~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~ 239 (445)
T 2okc_A 160 IQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSP 239 (445)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCS
T ss_pred HHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCC
Confidence 344444444567789999999999999988873 235799999999 9999999999888752 578
Q ss_pred EEEcccccccCCCCceeEEEEecccccccCh--------------hHHHHHHHHHHhcccCCeEEE
Q 015306 175 VLKGKIEEIELPVTKVDIIISEWMGYFLLFE--------------NMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 175 ~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~--------------~~~~~~l~~~~~~LkpgG~li 226 (409)
++++|....+.. ++||+|+++++....... .....++..+.++|||||+++
T Consensus 240 i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a 304 (445)
T 2okc_A 240 IVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAA 304 (445)
T ss_dssp EEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred EeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEE
Confidence 899998876554 589999999753221110 011367888889999999876
No 262
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.00 E-value=1.9e-10 Score=99.65 Aligned_cols=88 Identities=15% Similarity=0.050 Sum_probs=71.4
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---CCCceeEE
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDII 193 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~DvV 193 (409)
..+.+|.+|||||||. +++|+|+ |++.|+++... +++++++|+.++++ ++++||+|
T Consensus 8 ~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred cCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEE
Confidence 3467899999999996 2399999 99999987532 38999999999887 67899999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++..+.+++ ..++..+++++.++|||||+++.
T Consensus 68 ~~~~~l~~~--~~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 68 LSGLVPGST--TLHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp EECCSTTCC--CCCCHHHHHHHHHHEEEEEEEEE
T ss_pred EECChhhhc--ccCHHHHHHHHHHHCCCCEEEEE
Confidence 996543333 14567899999999999999986
No 263
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.98 E-value=1e-09 Score=106.14 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
..++.+|||||||+|.++..+++. +..+++++|+ + +++.|++ . .+++++.+|+.+ +++ .||+|++..
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p--~~D~v~~~~ 254 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIP--NADAVLLKY 254 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCC--CCSEEEEES
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCC--CccEEEeeh
Confidence 456789999999999999999984 4569999999 8 9887765 1 239999999976 555 399999976
Q ss_pred ccccccChhHHHHHHHHHHhcccC---CeEEEcc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVD---DGIVLPD 228 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~Lkp---gG~lip~ 228 (409)
+.+++. ......+++.+.++||| ||+++..
T Consensus 255 ~lh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 255 ILHNWT-DKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred hhccCC-HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 544332 12334899999999999 9998754
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.94 E-value=3.2e-09 Score=111.43 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=90.1
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcC-------------------------------------------
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG------------------------------------------- 144 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g------------------------------------------- 144 (409)
+.+..++.......++..|||++||+|.+++.++..+
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 3556666666666788899999999999999988742
Q ss_pred CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC--CCceeEEEEeccccc--ccChhHHHHHHHHHHhcc
Q 015306 145 AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP--VTKVDIIISEWMGYF--LLFENMLNTVLYARDKWL 219 (409)
Q Consensus 145 ~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~--~~~~DvVvs~~~~~~--l~~~~~~~~~l~~~~~~L 219 (409)
..+|+|+|+++ +++.|++++..+|+.+.+++.++|+.++..+ .++||+|+++++ |. +.....+..+...+.+.|
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPP-YG~Rlg~~~~l~~ly~~l~~~l 334 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP-YGERLDSEPALIALHSLLGRIM 334 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCC-CCC---CCHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCC-ccccccchhHHHHHHHHHHHHH
Confidence 14799999999 9999999999999998899999999988544 238999999974 33 222345556665555444
Q ss_pred ---cCCeEEE
Q 015306 220 ---VDDGIVL 226 (409)
Q Consensus 220 ---kpgG~li 226 (409)
.|||.+.
T Consensus 335 k~~~~g~~~~ 344 (703)
T 3v97_A 335 KNQFGGWNLS 344 (703)
T ss_dssp HHHCTTCEEE
T ss_pred HhhCCCCeEE
Confidence 4788754
No 265
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.94 E-value=1.9e-09 Score=100.89 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=70.2
Q ss_pred ccCCCCCCEEEEEcCCC------ChHHHHHHH-cC-CCEEEEEecHHHHHHHHHHHHHcCCCCcEEE-EEcccccccCCC
Q 015306 117 NKFLFKDKVVLDVGAGT------GILSLFCAK-AG-AAHVYAVECSQMANMAKQIVEANGFSNVITV-LKGKIEEIELPV 187 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~------G~l~~~la~-~g-~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~-~~~d~~~~~~~~ 187 (409)
.....++.+|||||||+ |. ..+++ .+ ..+|+|+|+++. + .++++ +++|+.+++++
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------------v-~~v~~~i~gD~~~~~~~- 121 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------------V-SDADSTLIGDCATVHTA- 121 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------------B-CSSSEEEESCGGGCCCS-
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------------C-CCCEEEEECccccCCcc-
Confidence 34567889999999954 66 33444 55 469999999984 1 24788 99999988765
Q ss_pred CceeEEEEeccccc--------ccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYF--------LLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~--------l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++||+|++++.... .........+++.+.++|||||.++.
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 78999999753221 11123456889999999999999985
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.91 E-value=1.4e-08 Score=89.61 Aligned_cols=98 Identities=19% Similarity=0.189 Sum_probs=76.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC--CCcEEEEEcccccc---------------
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF--SNVITVLKGKIEEI--------------- 183 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--------------- 183 (409)
+.++|||+|| |..++.+|+....+|++||.++ .++.|++++..+|+ .++|+++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5679999998 4788888885357999999999 99999999999998 78999999996542
Q ss_pred c--------C-CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 184 E--------L-PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 184 ~--------~-~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+ . ..++||+|+.+.- .. ...+..+.++|+|||+++...
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-------k~-~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-------FR-VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-------SH-HHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-------Cc-hhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 1368999997641 11 244444558999999998654
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.86 E-value=8.9e-10 Score=101.75 Aligned_cols=79 Identities=27% Similarity=0.145 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-H-------HHHHHHHHHHcCCCCcEEEEEccccccc--CCC--
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-M-------ANMAKQIVEANGFSNVITVLKGKIEEIE--LPV-- 187 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~-------~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~-- 187 (409)
..++.+|||+|||+|.+++.+++.|. +|+++|+++ + ++.|++++..+++.++++++++|+.++. +++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 45678999999999999999999865 899999998 4 3456666666666667999999998852 333
Q ss_pred CceeEEEEeccc
Q 015306 188 TKVDIIISEWMG 199 (409)
Q Consensus 188 ~~~DvVvs~~~~ 199 (409)
++||+|+++++.
T Consensus 160 ~~fD~V~~dP~~ 171 (258)
T 2r6z_A 160 GKPDIVYLDPMY 171 (258)
T ss_dssp CCCSEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 689999998753
No 268
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.86 E-value=2.8e-09 Score=104.18 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc--CCCCcEEEEEcccccc-cC-CCCceeEEEEe
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN--GFSNVITVLKGKIEEI-EL-PVTKVDIIISE 196 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~--~~~~~i~~~~~d~~~~-~~-~~~~~DvVvs~ 196 (409)
+|.+|||+|||+|..++.+++.+. +|++||+|+ +++.|++++..+ ++ ++++++++|+.+. .. +.++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 589999999999999999998854 999999999 999999999988 88 6799999999885 21 23589999998
Q ss_pred cc
Q 015306 197 WM 198 (409)
Q Consensus 197 ~~ 198 (409)
+.
T Consensus 171 PP 172 (410)
T 3ll7_A 171 PA 172 (410)
T ss_dssp CE
T ss_pred CC
Confidence 74
No 269
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.85 E-value=3.4e-09 Score=99.86 Aligned_cols=77 Identities=18% Similarity=0.278 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CC---CCcee
Q 015306 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP---VTKVD 191 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~---~~~~D 191 (409)
...++.+|||+|||+|..+..+++. +..+|+|+|.|+ +++.|++++..++ ++++++++|+.+++ +. ..+||
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D 100 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVD 100 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCC
Confidence 4568899999999999999999996 356999999999 9999999998877 57999999998875 22 15899
Q ss_pred EEEEec
Q 015306 192 IIISEW 197 (409)
Q Consensus 192 vVvs~~ 197 (409)
.|++++
T Consensus 101 ~Vl~D~ 106 (301)
T 1m6y_A 101 GILMDL 106 (301)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999875
No 270
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.85 E-value=5.1e-09 Score=101.42 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.+|||||||+|.++..+++. +..+++++|++.+++.|++ . .+++++.+|+.+ +++ +||+|++..+.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKWVL 261 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEcccc
Confidence 46689999999999999999985 4568999999338776654 2 249999999987 555 49999997654
Q ss_pred ccccChhHHHHHHHHHHhcccC---CeEEEcc
Q 015306 200 YFLLFENMLNTVLYARDKWLVD---DGIVLPD 228 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~Lkp---gG~lip~ 228 (409)
+.+. ......+++.+.+.|+| ||+++..
T Consensus 262 h~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 262 HDWN-DEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp GGSC-HHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred cCCC-HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 4332 22344899999999999 9988753
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.83 E-value=7.6e-09 Score=96.48 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=63.7
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCC---EEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAA---HVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~---~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
.|.......++.+|||||||+|.++..+++.+.. +|+|+|+++ +++.++++. .++++++++|+.++++++-
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~~ 107 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGSI 107 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGGG
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhHh
Confidence 3444445678899999999999999999997542 299999999 999999883 2569999999999876521
Q ss_pred ------ceeEEEEecc
Q 015306 189 ------KVDIIISEWM 198 (409)
Q Consensus 189 ------~~DvVvs~~~ 198 (409)
..+.||+++.
T Consensus 108 ~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 108 ARPGDEPSLRIIGNLP 123 (279)
T ss_dssp SCSSSSCCEEEEEECC
T ss_pred cccccCCceEEEEccC
Confidence 3457888863
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.80 E-value=6.3e-09 Score=95.51 Aligned_cols=84 Identities=19% Similarity=0.262 Sum_probs=66.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
+.+.|.+.....++.+|||||||+|.++..+++.|+.+|+|+|+++ +++.++++ + ..+++++++|+.++++++.
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPFCSL 93 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCGGGS
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCChhHc
Confidence 3344444455678899999999999999999998777999999999 99999876 1 2469999999999876521
Q ss_pred -ceeEEEEecc
Q 015306 189 -KVDIIISEWM 198 (409)
Q Consensus 189 -~~DvVvs~~~ 198 (409)
....|++++.
T Consensus 94 ~~~~~vv~NlP 104 (249)
T 3ftd_A 94 GKELKVVGNLP 104 (249)
T ss_dssp CSSEEEEEECC
T ss_pred cCCcEEEEECc
Confidence 1237777763
No 273
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.78 E-value=7.4e-09 Score=95.29 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=64.1
Q ss_pred cCCCCC--CEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-------C-CCCcEEEEEccccccc--
Q 015306 118 KFLFKD--KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-------G-FSNVITVLKGKIEEIE-- 184 (409)
Q Consensus 118 ~~~~~~--~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~-------~-~~~~i~~~~~d~~~~~-- 184 (409)
....++ .+|||+|||+|..++.+++.|+ +|++||.++ ++..+++++... + +.++++++++|+.++.
T Consensus 82 l~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 82 VGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp TTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred hcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 444566 8999999999999999999877 799999999 988887776432 2 3356999999998853
Q ss_pred CCCCceeEEEEeccc
Q 015306 185 LPVTKVDIIISEWMG 199 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~ 199 (409)
++ ++||+|+++++.
T Consensus 161 ~~-~~fDvV~lDP~y 174 (258)
T 2oyr_A 161 IT-PRPQVVYLDPMF 174 (258)
T ss_dssp CS-SCCSEEEECCCC
T ss_pred Cc-ccCCEEEEcCCC
Confidence 33 479999999863
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.73 E-value=1.7e-08 Score=102.86 Aligned_cols=113 Identities=13% Similarity=-0.065 Sum_probs=82.7
Q ss_pred HHhccCCCCCCEEEEEcCCCChHHHHHHHc----C---------------CCEEEEEecHH-HHHHHHHHHHHcCCCC--
Q 015306 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA----G---------------AAHVYAVECSQ-MANMAKQIVEANGFSN-- 171 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~G~l~~~la~~----g---------------~~~V~~vD~s~-~~~~a~~~~~~~~~~~-- 171 (409)
+.+.....++.+|||.|||+|.+...+++. + ..+++|+|+++ +++.|+.++...++.+
T Consensus 161 mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~ 240 (541)
T 2ar0_A 161 IIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNL 240 (541)
T ss_dssp HHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBG
T ss_pred HHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccc
Confidence 333344567789999999999998888763 1 13799999999 9999999998888754
Q ss_pred --cEEEEEccccccc-CCCCceeEEEEecccccccC-----------hhHHHHHHHHHHhcccCCeEEE
Q 015306 172 --VITVLKGKIEEIE-LPVTKVDIIISEWMGYFLLF-----------ENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 172 --~i~~~~~d~~~~~-~~~~~~DvVvs~~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~li 226 (409)
.+.++++|....+ .+.++||+|+++++...... ...-..++..+.++|||||++.
T Consensus 241 ~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 309 (541)
T 2ar0_A 241 DHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAA 309 (541)
T ss_dssp GGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred cccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEE
Confidence 2678899986543 23478999999975322111 0112367888889999999865
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.73 E-value=7.6e-09 Score=95.10 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=61.7
Q ss_pred HHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCE--EEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC--
Q 015306 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAH--VYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-- 187 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~--V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-- 187 (409)
.|.+.....++.+|||||||+|.++. +++ + .+ |+|+|+++ +++.+++++... ++++++++|+.+++++.
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhh
Confidence 33333456788899999999999999 765 3 46 99999999 999999876432 46999999999977541
Q ss_pred ---CceeEEEEecc
Q 015306 188 ---TKVDIIISEWM 198 (409)
Q Consensus 188 ---~~~DvVvs~~~ 198 (409)
+..|+|++++.
T Consensus 86 ~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 86 EKMGQPLRVFGNLP 99 (252)
T ss_dssp HHHTSCEEEEEECC
T ss_pred cccCCceEEEECCC
Confidence 23578998864
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.72 E-value=2.7e-08 Score=92.73 Aligned_cols=108 Identities=17% Similarity=0.206 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--C-C-CCcEEEEEccccccc-CCCCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--G-F-SNVITVLKGKIEEIE-LPVTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~-~-~~~i~~~~~d~~~~~-~~~~~~DvV 193 (409)
...++||-||.|.|..+..+++. +..+|+.||+++ +++.+++.+... + + +.+++++.+|...+- ...++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45689999999999999999995 578999999999 999999987531 1 1 368999999998864 235789999
Q ss_pred EEecccccccChh-HHHHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+.......... .-..+++.+++.|+|||+++.+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 9975432211111 1247788999999999999854
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.59 E-value=3.2e-07 Score=93.25 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=81.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHc----CCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcccccc--c-CCCCce
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKA----GAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEI--E-LPVTKV 190 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~----g~~~V~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~--~-~~~~~~ 190 (409)
..++.+|||.+||+|.+.+.+++. +...++|+|+++ ++..|+.++..+|+. +++.+.++|.... + ....+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 346789999999999998888875 356899999999 999999999988885 4689999998765 2 335789
Q ss_pred eEEEEecccccccC--h------------h------H-HHHHHHHHHhccc-CCeEEE
Q 015306 191 DIIISEWMGYFLLF--E------------N------M-LNTVLYARDKWLV-DDGIVL 226 (409)
Q Consensus 191 DvVvs~~~~~~l~~--~------------~------~-~~~~l~~~~~~Lk-pgG~li 226 (409)
|+|+++|+.. ... . + . --.++..+.+.|+ |||++.
T Consensus 299 D~IvaNPPf~-~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 299 DGVLMNPPYS-AKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp SEEEECCCTT-CCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred cEEEecCCcC-CccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 9999997432 111 0 0 0 0147788889999 999864
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.59 E-value=5.6e-08 Score=98.92 Aligned_cols=102 Identities=14% Similarity=0.016 Sum_probs=75.8
Q ss_pred EEEEEcCCCChHHHHHHHc-----C-----------CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-CC
Q 015306 125 VVLDVGAGTGILSLFCAKA-----G-----------AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LP 186 (409)
Q Consensus 125 ~VLDlGcG~G~l~~~la~~-----g-----------~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~ 186 (409)
+|||.+||+|.+.+.+++. + ...++|+|+++ ++..|+.++..+++...+.+.++|....+ .+
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccc
Confidence 9999999999988877542 0 34899999999 99999999999998765555788876544 34
Q ss_pred CCceeEEEEeccccccc-------------------------Chh-HHHHHHHHHHhcccCCeEEE
Q 015306 187 VTKVDIIISEWMGYFLL-------------------------FEN-MLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~-------------------------~~~-~~~~~l~~~~~~LkpgG~li 226 (409)
..+||+|+++|+...-. ... .--.++..+.+.|+|||++.
T Consensus 327 ~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 392 (544)
T 3khk_A 327 DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMA 392 (544)
T ss_dssp TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEE
T ss_pred cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEE
Confidence 57899999997432110 000 01157888889999999854
No 279
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.58 E-value=9.5e-08 Score=87.33 Aligned_cols=114 Identities=18% Similarity=0.186 Sum_probs=72.8
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
+.+...+ ..+.++.+|||||||+|.++..+++ .++..|+|+|+.. +....... ...++ + +..+..++....++.
T Consensus 63 L~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~-ii~~~~~~dv~~l~~ 138 (277)
T 3evf_A 63 LRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-N-IITFKDKTDIHRLEP 138 (277)
T ss_dssp HHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-G-GEEEECSCCTTTSCC
T ss_pred HHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-C-eEEEeccceehhcCC
Confidence 3343444 5567888999999999999999887 4777899999874 31000000 00011 2 444566665555666
Q ss_pred CceeEEEEecccccccChhH---HHHHHHHHHhcccCC-eEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENM---LNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~---~~~~l~~~~~~Lkpg-G~lip 227 (409)
++||+|+|+...+...+.-+ ...+++.+.++|+|| |.++.
T Consensus 139 ~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 139 VKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 89999999875441111111 113467778999999 99884
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.52 E-value=2.3e-07 Score=89.26 Aligned_cols=115 Identities=20% Similarity=0.075 Sum_probs=88.8
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCC-----CcEEEEEccccccc-CCCCc
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFS-----NVITVLKGKIEEIE-LPVTK 189 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~-----~~i~~~~~d~~~~~-~~~~~ 189 (409)
+...+|.+|||+++|.|.=+..+++.+ ...|+|+|+++ -+..+++++...+.. +++.+...|...+. ...+.
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 456889999999999999999999864 34799999999 999999999887653 46899999988764 33478
Q ss_pred eeEEEEeccccc----ccC-h---------h-------HHHHHHHHHHhcccCCeEEEccCCce
Q 015306 190 VDIIISEWMGYF----LLF-E---------N-------MLNTVLYARDKWLVDDGIVLPDKASL 232 (409)
Q Consensus 190 ~DvVvs~~~~~~----l~~-~---------~-------~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (409)
||.|+.+...+. ... . . ....++....++|||||+++-+++++
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 999999864332 110 0 0 12467788889999999999777664
No 281
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.50 E-value=1.1e-06 Score=81.50 Aligned_cols=119 Identities=9% Similarity=0.075 Sum_probs=86.7
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc------CCCEEEEEecH--------------------------
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA------GAAHVYAVECS-------------------------- 154 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~------g~~~V~~vD~s-------------------------- 154 (409)
...+...+...........|||+|+..|..++.+++. ...+|+++|..
T Consensus 91 ~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~ 170 (282)
T 2wk1_A 91 LENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVL 170 (282)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccc
Confidence 3334444433333345679999999999998888763 25689999953
Q ss_pred H-HHHHHHHHHHHcCCC-CcEEEEEccccccc--CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCC
Q 015306 155 Q-MANMAKQIVEANGFS-NVITVLKGKIEEIE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 155 ~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
+ .++.+++++...|+. ++|+++.+++.+.- ++.++||+|+.+. . .+ ......++.+...|+|||+++...+
T Consensus 171 ~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D---~y-~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 171 AVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-D---LY-ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-C---SH-HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred hhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-C---cc-ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 2 367789999999984 88999999997743 3347899999764 1 12 2234678889999999999998765
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.45 E-value=7e-07 Score=85.36 Aligned_cols=71 Identities=18% Similarity=0.219 Sum_probs=58.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
+.+|.+||||||++|.++..+++.|. +|+|||..+|...+. .. .+|+++++|...+..+..++|+|+|++.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l~----~~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSLM----DT---GQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHHH----TT---TCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhhc----cC---CCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 57899999999999999999999976 999999877333222 11 4599999999998877678999999874
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.45 E-value=2.9e-07 Score=88.41 Aligned_cols=120 Identities=20% Similarity=0.181 Sum_probs=85.9
Q ss_pred HHHHHHHhcc-CCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc---CC----CCcEEEEEcc
Q 015306 109 SYQNVIYQNK-FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN---GF----SNVITVLKGK 179 (409)
Q Consensus 109 ~~~~~l~~~~-~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~---~~----~~~i~~~~~d 179 (409)
.|.+.+.... ...++++||-||.|.|..+..+.+.+..+|+.||+++ +++.+++.+... .+ .++++++.+|
T Consensus 191 ~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~D 270 (381)
T 3c6k_A 191 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 270 (381)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred HHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHH
Confidence 4555554322 1235689999999999999999997778999999999 999999975321 11 2468999999
Q ss_pred ccccc----CCCCceeEEEEeccccccc------Ch-hHHHHHHHHHHhcccCCeEEEcc
Q 015306 180 IEEIE----LPVTKVDIIISEWMGYFLL------FE-NMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 180 ~~~~~----~~~~~~DvVvs~~~~~~l~------~~-~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
...+- -..++||+|+.+....... .. --...+++.+++.|+|||+++.+
T Consensus 271 a~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 271 CIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 97653 1246899999975321111 11 11257788899999999998843
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.43 E-value=7.3e-08 Score=88.21 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=70.7
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
+.+...+. .+.++.+|||||||+|.++..+++ .|+..|+|+|+.. +...+... ...+. +.+ .+..++....++.
T Consensus 79 L~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~-~ii-~~~~~~dv~~l~~ 154 (282)
T 3gcz_A 79 LRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGW-NLI-RFKDKTDVFNMEV 154 (282)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTG-GGE-EEECSCCGGGSCC
T ss_pred HHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCC-ceE-EeeCCcchhhcCC
Confidence 33334443 567888999999999999999986 6788999999975 32211100 00111 223 3343333334556
Q ss_pred CceeEEEEecccccccChhH---HHHHHHHHHhcccCC--eEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENM---LNTVLYARDKWLVDD--GIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~---~~~~l~~~~~~Lkpg--G~lip 227 (409)
.++|+|+|++........-+ ...+++-+.++|+|| |.|+.
T Consensus 155 ~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 155 IPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 89999999875541111111 123466678999999 99873
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.38 E-value=1.3e-06 Score=90.85 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcC----CCEEEEEecHH-HHHHH--HHHHHHcCCC---CcEEEEEccccccc-CCCCc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAG----AAHVYAVECSQ-MANMA--KQIVEANGFS---NVITVLKGKIEEIE-LPVTK 189 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g----~~~V~~vD~s~-~~~~a--~~~~~~~~~~---~~i~~~~~d~~~~~-~~~~~ 189 (409)
.++.+|||.|||+|.+.+.+++.. ..+++|+|+++ +++.| +.++..+.+. +...+...|+.... ...++
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 467899999999999999999842 24799999999 99999 5554442221 11355666666532 23478
Q ss_pred eeEEEEeccccccc-C-hh-------------------------HHHHHHHHHHhcccCCeEEE
Q 015306 190 VDIIISEWMGYFLL-F-EN-------------------------MLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 190 ~DvVvs~~~~~~l~-~-~~-------------------------~~~~~l~~~~~~LkpgG~li 226 (409)
||+||++|+ |... . .. ....++..+.++|+|||++.
T Consensus 400 FDVVIgNPP-Yg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 400 VSVVVMNPP-YVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp EEEEEECCB-CCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred CCEEEECCC-ccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 999999984 3221 1 00 12346777889999999875
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.34 E-value=9.2e-07 Score=81.27 Aligned_cols=107 Identities=21% Similarity=0.135 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHc-------CC------CEEEEEecHH---------------HHHHHHHHHHHc-----
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKA-------GA------AHVYAVECSQ---------------MANMAKQIVEAN----- 167 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~-------g~------~~V~~vD~s~---------------~~~~a~~~~~~~----- 167 (409)
.++.+|||||+|+|..++.+++. +. .+|+++|..+ +.+.|++.+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35679999999999888776552 22 4899999753 233556655431
Q ss_pred -----CCC---CcEEEEEcccccc-c-CCC---CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 168 -----GFS---NVITVLKGKIEEI-E-LPV---TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 168 -----~~~---~~i~~~~~d~~~~-~-~~~---~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+. .+++++.+|+.+. + .+. ..||+|+.+.+...-..+-.-+.++..+.++|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 011 3588999999884 3 221 2799999875321111111236789999999999999984
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.33 E-value=6.2e-07 Score=73.85 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=52.0
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCC-hHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGTG-ILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~G-~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (409)
.+.+.|.+. ..++.+|||||||+| ..+..|++ .|. .|+++|+++ .++ +++.|+.+..+
T Consensus 24 ~LaeYI~~~--~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~~ 84 (153)
T 2k4m_A 24 DLAVYIIRC--SGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPRM 84 (153)
T ss_dssp HHHHHHHHH--SCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCCH
T ss_pred HHHHHHHhc--CCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCcc
Confidence 455555533 345679999999999 59999998 776 899999998 544 88889887543
Q ss_pred CC-CceeEEEE
Q 015306 186 PV-TKVDIIIS 195 (409)
Q Consensus 186 ~~-~~~DvVvs 195 (409)
.. +.||+|.+
T Consensus 85 ~~Y~~~DLIYs 95 (153)
T 2k4m_A 85 EIYRGAALIYS 95 (153)
T ss_dssp HHHTTEEEEEE
T ss_pred cccCCcCEEEE
Confidence 21 48999977
No 288
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.31 E-value=4.3e-06 Score=74.09 Aligned_cols=111 Identities=18% Similarity=0.247 Sum_probs=72.8
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ccccccCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELP 186 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~ 186 (409)
+.+...+. .+.++.+||||||++|.++..++. .|+.+|+|+|+-. -.+ --...+..|| +.|+|+.+ |+..++.
T Consensus 67 L~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-~P~~~~s~gw-n~v~fk~gvDv~~~~~- 142 (267)
T 3p8z_A 67 LQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-EPVPMSTYGW-NIVKLMSGKDVFYLPP- 142 (267)
T ss_dssp HHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-CCCCCCCTTT-TSEEEECSCCGGGCCC-
T ss_pred HHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-CcchhhhcCc-CceEEEeccceeecCC-
Confidence 33444443 567888999999999999998887 6888999999976 110 0001122355 45999999 9866543
Q ss_pred CCceeEEEEecccccccChhHH---HHHHHHHHhcccCCeEEE
Q 015306 187 VTKVDIIISEWMGYFLLFENML---NTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~---~~~l~~~~~~LkpgG~li 226 (409)
.++|+|+|++-......+-+- -.+++-+.++|++ |.++
T Consensus 143 -~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc 183 (267)
T 3p8z_A 143 -EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFC 183 (267)
T ss_dssp -CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEE
T ss_pred -ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEE
Confidence 779999998633221111111 2356667899998 5443
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.25 E-value=5.6e-07 Score=82.88 Aligned_cols=114 Identities=17% Similarity=0.150 Sum_probs=70.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (409)
+.++..+ ..+.++.+||||||++|.++..+++ .|+..|+|+|+.. +...... ....++ +.+.+ ..++....+..
T Consensus 70 L~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~-~~~~di~~l~~ 145 (300)
T 3eld_A 70 IRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKF-KDKSNVFTMPT 145 (300)
T ss_dssp HHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEE-ECSCCTTTSCC
T ss_pred HHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEe-ecCceeeecCC
Confidence 3444444 4567889999999999999999998 5777899999974 3110000 000011 22333 33333233455
Q ss_pred CceeEEEEecccccccChh---HHHHHHHHHHhcccCC-eEEEc
Q 015306 188 TKVDIIISEWMGYFLLFEN---MLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~---~~~~~l~~~~~~Lkpg-G~lip 227 (409)
+++|+|+|+...+.....- ....++.-+.++|+|| |.|+.
T Consensus 146 ~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~ 189 (300)
T 3eld_A 146 EPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCV 189 (300)
T ss_dssp CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 7899999986554111111 1124467778999999 99883
No 290
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.18 E-value=7.2e-06 Score=75.12 Aligned_cols=112 Identities=19% Similarity=0.190 Sum_probs=71.5
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ccccccCC
Q 015306 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELP 186 (409)
Q Consensus 110 ~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~ 186 (409)
+.+.+.+ ..+.++.+||||||++|.++..++. .|+.+|+|+|+-. -.+. -..++..++ +.|+++.+ |+..++.
T Consensus 83 L~ei~~~-~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l~~- 158 (321)
T 3lkz_A 83 LRWLVER-RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYRPS- 158 (321)
T ss_dssp HHHHHHT-TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSSCC-
T ss_pred HHHHHHh-cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhCCC-
Confidence 3333333 5567888999999999999998877 6888999999865 1100 000011233 34888888 8877654
Q ss_pred CCceeEEEEecccccccChhHH---HHHHHHHHhcccCC-eEEE
Q 015306 187 VTKVDIIISEWMGYFLLFENML---NTVLYARDKWLVDD-GIVL 226 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~---~~~l~~~~~~Lkpg-G~li 226 (409)
.++|+|+|+.--.....+-+- -.+|+-+.++|++| |-++
T Consensus 159 -~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~ 201 (321)
T 3lkz_A 159 -ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFC 201 (321)
T ss_dssp -CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred -CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEE
Confidence 679999998521111111111 23566668999988 6554
No 291
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.16 E-value=3e-06 Score=76.31 Aligned_cols=100 Identities=18% Similarity=0.186 Sum_probs=63.6
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-CC----CEEEEEe--cHHHHHHHHHHHHHcCCCCcEEEEEc-ccccccCCCCc
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA----AHVYAVE--CSQMANMAKQIVEANGFSNVITVLKG-KIEEIELPVTK 189 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g~----~~V~~vD--~s~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~ 189 (409)
.-+.++.+||||||+.|.++..+++. +. ..|+|+| +.++.. ...|+ +-++++++ |+.++. ..+
T Consensus 69 ~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~------~~~Gv-~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 69 RFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM------QSYGW-NIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp TSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC------CSTTG-GGEEEECSCCGGGSC--CCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc------cCCCc-eEEEeeccCCccCCC--CCC
Confidence 35788999999999999999999985 33 2455555 222000 00121 33577767 998753 368
Q ss_pred eeEEEEecccccccChhHHH---HHHHHHHhcccCCe-EEE
Q 015306 190 VDIIISEWMGYFLLFENMLN---TVLYARDKWLVDDG-IVL 226 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~---~~l~~~~~~LkpgG-~li 226 (409)
+|+|+|++........-+.. .+++-+.++|+||| .|+
T Consensus 140 ~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 140 SDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEE
Confidence 99999987544211111111 24555678999999 776
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.14 E-value=4.8e-06 Score=76.56 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=62.3
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----CCCCcee
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D 191 (409)
....++..+||.+||.|..+..+++. ..+|+|+|.++ +++.|++ +.. ++++++++++.++. ...+++|
T Consensus 18 L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~~~vD 91 (285)
T 1wg8_A 18 LAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALGVERVD 91 (285)
T ss_dssp HTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred hCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcCCCCcC
Confidence 34568899999999999999999998 45999999999 9999988 533 47999999999875 1235799
Q ss_pred EEEEec
Q 015306 192 IIISEW 197 (409)
Q Consensus 192 vVvs~~ 197 (409)
.|++++
T Consensus 92 gIL~DL 97 (285)
T 1wg8_A 92 GILADL 97 (285)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 999874
No 293
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.10 E-value=3.3e-05 Score=74.52 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=66.7
Q ss_pred CCEEEEEcCCCChHHHHHHHc----------------CCCEEEEEecHH-HHHHHHHHHHHcC-----------C--C-C
Q 015306 123 DKVVLDVGAGTGILSLFCAKA----------------GAAHVYAVECSQ-MANMAKQIVEANG-----------F--S-N 171 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~----------------g~~~V~~vD~s~-~~~~a~~~~~~~~-----------~--~-~ 171 (409)
+.+|+|+|||+|..++.+... +.-+|+.-|+.. .....-+.+.... . . -
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 579999999999988877321 233778888766 4333222222110 0 0 1
Q ss_pred cEEEEEcccccccCCCCceeEEEEecccccccCh-----------------------------------hHHHHHHHHHH
Q 015306 172 VITVLKGKIEEIELPVTKVDIIISEWMGYFLLFE-----------------------------------NMLNTVLYARD 216 (409)
Q Consensus 172 ~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~l~~~-----------------------------------~~~~~~l~~~~ 216 (409)
-+..+-+....-.+|.+++|+|+|+...+.+... .++..+++.++
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222333343345778999999998665554321 15567889999
Q ss_pred hcccCCeEEEcc
Q 015306 217 KWLVDDGIVLPD 228 (409)
Q Consensus 217 ~~LkpgG~lip~ 228 (409)
+.|+|||+++..
T Consensus 213 ~eL~pGG~mvl~ 224 (374)
T 3b5i_A 213 AEVKRGGAMFLV 224 (374)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHhCCCCEEEEE
Confidence 999999999853
No 294
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.85 E-value=4.1e-05 Score=74.04 Aligned_cols=102 Identities=14% Similarity=0.093 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCChHHHHHHHc------------------CCCEEEEEecH-----------H-HHHHHHHHHHHcCCCCc
Q 015306 123 DKVVLDVGAGTGILSLFCAKA------------------GAAHVYAVECS-----------Q-MANMAKQIVEANGFSNV 172 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~------------------g~~~V~~vD~s-----------~-~~~~a~~~~~~~~~~~~ 172 (409)
..+|+|+||++|..++.+... +.-+|+..|+. + +.+.++ ...|-...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 578999999999888877654 12367888876 2 222211 12221111
Q ss_pred EEEEEcccc---cccCCCCceeEEEEecccccccChh------------------------------------HHHHHHH
Q 015306 173 ITVLKGKIE---EIELPVTKVDIIISEWMGYFLLFEN------------------------------------MLNTVLY 213 (409)
Q Consensus 173 i~~~~~d~~---~~~~~~~~~DvVvs~~~~~~l~~~~------------------------------------~~~~~l~ 213 (409)
-.|+.+... .-.+|.+++|+|+|+...+.+...+ ++..+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 244444433 3457889999999986555443211 2234588
Q ss_pred HHHhcccCCeEEEc
Q 015306 214 ARDKWLVDDGIVLP 227 (409)
Q Consensus 214 ~~~~~LkpgG~lip 227 (409)
.+.+.|+|||+++.
T Consensus 210 ~Ra~eL~pGG~mvl 223 (384)
T 2efj_A 210 IHSEELISRGRMLL 223 (384)
T ss_dssp HHHHHEEEEEEEEE
T ss_pred HHHHHhccCCeEEE
Confidence 88999999999984
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.84 E-value=5.9e-05 Score=76.47 Aligned_cols=86 Identities=14% Similarity=0.099 Sum_probs=63.7
Q ss_pred HHHHhccCCCCCCEEEEEcCCCChHHHHHHHc----C----------CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEE
Q 015306 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA----G----------AAHVYAVECSQ-MANMAKQIVEANGFSNVITVL 176 (409)
Q Consensus 112 ~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~----g----------~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~ 176 (409)
+.+.+.....++.+|+|.+||+|.+...+.++ + ...++|+|+++ +...|+-++--.|... ..+.
T Consensus 207 ~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~-~~I~ 285 (530)
T 3ufb_A 207 RFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRID 285 (530)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC-CEEE
T ss_pred HHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc-cccc
Confidence 33333344567789999999999998877652 1 23699999999 9999999888888753 4667
Q ss_pred EcccccccC----CCCceeEEEEecc
Q 015306 177 KGKIEEIEL----PVTKVDIIISEWM 198 (409)
Q Consensus 177 ~~d~~~~~~----~~~~~DvVvs~~~ 198 (409)
.+|....+. +..+||+|+++|+
T Consensus 286 ~~dtL~~~~~~~~~~~~fD~Il~NPP 311 (530)
T 3ufb_A 286 PENSLRFPLREMGDKDRVDVILTNPP 311 (530)
T ss_dssp CSCTTCSCGGGCCGGGCBSEEEECCC
T ss_pred ccccccCchhhhcccccceEEEecCC
Confidence 777765432 2357999999985
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.80 E-value=4.9e-05 Score=71.28 Aligned_cols=46 Identities=35% Similarity=0.389 Sum_probs=42.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN 167 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~ 167 (409)
.++.+|||++||+|.+++.+++.|. +++|+|+++ +++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 6889999999999999999999876 999999999 999999998764
No 297
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.59 E-value=0.00036 Score=63.91 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=67.5
Q ss_pred HHHHHHHh-ccCCCCCCEEEEEcC------CCChHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc
Q 015306 109 SYQNVIYQ-NKFLFKDKVVLDVGA------GTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG 178 (409)
Q Consensus 109 ~~~~~l~~-~~~~~~~~~VLDlGc------G~G~l~~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~ 178 (409)
.+-+.|.. ......+.+|||+|+ -.|. ..+.+.+. ..|+++|+.+ .. ..+ .++++
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~--~~IqG 159 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD--STLIG 159 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS--EEEES
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC--eEEEc
Confidence 34444533 345677899999997 4455 33444433 3999999988 31 112 45999
Q ss_pred ccccccCCCCceeEEEEeccccccc--------ChhHHHHHHHHHHhcccCCeEEE
Q 015306 179 KIEEIELPVTKVDIIISEWMGYFLL--------FENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 179 d~~~~~~~~~~~DvVvs~~~~~~l~--------~~~~~~~~l~~~~~~LkpgG~li 226 (409)
|...+... ++||+|+|++....-. .....+.+++-+.+.|+|||.|+
T Consensus 160 D~~~~~~~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFv 214 (344)
T 3r24_A 160 DCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIA 214 (344)
T ss_dssp CGGGEEES-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccccC-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEE
Confidence 98776554 8899999985432211 12245667777889999999987
No 298
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.53 E-value=5.7e-05 Score=72.41 Aligned_cols=106 Identities=15% Similarity=0.193 Sum_probs=69.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHc------------C-----CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEE---ccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA------------G-----AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLK---GKI 180 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~------------g-----~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~---~d~ 180 (409)
...+|+|+||++|..++.+... + .-+|+..|... ....+-+.+....-..+-.|+. +.+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999776644332 2 23789999888 6666655543211000123444 444
Q ss_pred ccccCCCCceeEEEEecccccccC------------------------------hhHHHHHHHHHHhcccCCeEEEc
Q 015306 181 EEIELPVTKVDIIISEWMGYFLLF------------------------------ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 181 ~~~~~~~~~~DvVvs~~~~~~l~~------------------------------~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..-.+|.+++|+|+|+...+.+.. ..++..+|+.+.+.|+|||+++.
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 445578899999999855444322 12456779999999999999984
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.48 E-value=5.6e-05 Score=69.54 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=80.4
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-c
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E 184 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~ 184 (409)
...|.+.|.. ..+..+||+-+|||.+++.+.+. ..+++.+|.++ .++..++++.. .+++++++.|.... .
T Consensus 80 l~~yf~~l~~----~n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~ 151 (283)
T 2oo3_A 80 FLEYISVIKQ----INLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLN 151 (283)
T ss_dssp GHHHHHHHHH----HSSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHH
T ss_pred HHHHHHHHHH----hcCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHH
Confidence 3467777664 24556899999999999999994 57999999999 99999888864 36799999997553 2
Q ss_pred ---CCCCceeEEEEecccccccChhHHHHHHHHHHh--cccCCeEEE
Q 015306 185 ---LPVTKVDIIISEWMGYFLLFENMLNTVLYARDK--WLVDDGIVL 226 (409)
Q Consensus 185 ---~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~--~LkpgG~li 226 (409)
.+..+||+|+.++. |.. ......++..+.+ .+.|+|+++
T Consensus 152 ~l~~~~~~fdLVfiDPP-Ye~--k~~~~~vl~~L~~~~~r~~~Gi~v 195 (283)
T 2oo3_A 152 ALLPPPEKRGLIFIDPS-YER--KEEYKEIPYAIKNAYSKFSTGLYC 195 (283)
T ss_dssp HHCSCTTSCEEEEECCC-CCS--TTHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HhcCCCCCccEEEECCC-CCC--CcHHHHHHHHHHHhCccCCCeEEE
Confidence 23357999999984 321 2355566655543 556899877
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.37 E-value=0.00037 Score=66.67 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=59.8
Q ss_pred hhcChHhHHHHHHHHHhccC--CCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEE
Q 015306 100 MLKDVVRTKSYQNVIYQNKF--LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITV 175 (409)
Q Consensus 100 ~l~d~~r~~~~~~~l~~~~~--~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~ 175 (409)
+|.|..-.+...+++.-... ..++..|||||.|.|.++..+++. .+++|+++|+++ ++...++.. . .+++++
T Consensus 34 FL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~i 109 (353)
T 1i4w_A 34 YLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQI 109 (353)
T ss_dssp CBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEE
T ss_pred ccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEE
Confidence 56666555555555431100 014689999999999999999985 467999999999 999988876 2 256999
Q ss_pred EEccccccc
Q 015306 176 LKGKIEEIE 184 (409)
Q Consensus 176 ~~~d~~~~~ 184 (409)
+.+|+.++.
T Consensus 110 i~~D~l~~~ 118 (353)
T 1i4w_A 110 LKRDPYDWS 118 (353)
T ss_dssp ECSCTTCHH
T ss_pred EECCccchh
Confidence 999997653
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.30 E-value=0.00037 Score=63.92 Aligned_cols=49 Identities=18% Similarity=0.270 Sum_probs=42.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF 169 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~ 169 (409)
..++..|||.+||+|..+..+.+.|. +++|+|+++ .++.|++++..+++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 36889999999999999999999865 999999999 99999999986653
No 302
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.15 E-value=0.0011 Score=64.11 Aligned_cols=69 Identities=26% Similarity=0.149 Sum_probs=57.1
Q ss_pred CEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC--------CCCceeEEE
Q 015306 124 KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------PVTKVDIII 194 (409)
Q Consensus 124 ~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~~DvVv 194 (409)
.+|||+.||.|.+++.+.++|...|.++|+++ +++..+.+.. ...++++|+.++.. ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 47999999999999999999998899999999 8888777642 25788899988742 236899999
Q ss_pred Eecc
Q 015306 195 SEWM 198 (409)
Q Consensus 195 s~~~ 198 (409)
..+.
T Consensus 77 ggpP 80 (376)
T 3g7u_A 77 GGPP 80 (376)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 8764
No 303
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.08 E-value=0.0011 Score=62.38 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=60.6
Q ss_pred cCCCCCCEEEEEcCCCChHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc--CC----CC
Q 015306 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP----VT 188 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~l~~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~----~~ 188 (409)
+...+|.+++|..||.|..+..+++. | ..+|+|+|.++ +++.|+ ++ ..+++++++++..++. ++ .+
T Consensus 53 L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g~~~ 127 (347)
T 3tka_A 53 LNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERDLIG 127 (347)
T ss_dssp TCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTTCTT
T ss_pred hCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcCCCC
Confidence 45678999999999999999999984 3 56999999999 999884 33 2368999999998874 11 13
Q ss_pred ceeEEEEec
Q 015306 189 KVDIIISEW 197 (409)
Q Consensus 189 ~~DvVvs~~ 197 (409)
++|.|+.+.
T Consensus 128 ~vDgILfDL 136 (347)
T 3tka_A 128 KIDGILLDL 136 (347)
T ss_dssp CEEEEEEEC
T ss_pred cccEEEECC
Confidence 699999874
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.02 E-value=0.0049 Score=58.52 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=83.3
Q ss_pred HhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcC---------------
Q 015306 105 VRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANG--------------- 168 (409)
Q Consensus 105 ~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~--------------- 168 (409)
.|+..+.+.+.+.....+...|+.||||....+..+... +..+++-||.-++++.-++.+...+
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~ 159 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAK 159 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccc
Confidence 345555555444332245678999999999999988873 4457888888447777777776652
Q ss_pred -----CCCcEEEEEccccccc--------C-CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 169 -----FSNVITVLKGKIEEIE--------L-PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 169 -----~~~~i~~~~~d~~~~~--------~-~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.+++..++.+|+.+.. . ......+++++.+..++. +.....+++.+.... |+|.++
T Consensus 160 ~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~-~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 160 SPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMH-NNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp TTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHC-SSEEEE
T ss_pred cccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCC-HHHHHHHHHHHHhhC-CCcEEE
Confidence 1367999999998742 1 235689999998766664 456678888887766 777664
No 305
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.83 E-value=0.00049 Score=65.81 Aligned_cols=69 Identities=22% Similarity=0.184 Sum_probs=56.1
Q ss_pred CEEEEEcCCCChHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---CCCceeEEEEec
Q 015306 124 KVVLDVGAGTGILSLFCAKAG--AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDIIISEW 197 (409)
Q Consensus 124 ~~VLDlGcG~G~l~~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~DvVvs~~ 197 (409)
.+|||+.||.|.+++.+.++| +..|+++|+++ +++..+.++.. ..++.+|+.++.. +...+|+|+..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 579999999999999999998 56899999999 99988887632 3477899988752 212699999976
Q ss_pred c
Q 015306 198 M 198 (409)
Q Consensus 198 ~ 198 (409)
.
T Consensus 77 P 77 (343)
T 1g55_A 77 P 77 (343)
T ss_dssp C
T ss_pred C
Confidence 4
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.81 E-value=0.0023 Score=60.66 Aligned_cols=69 Identities=20% Similarity=0.279 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC-CCceeEEEEecc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP-VTKVDIIISEWM 198 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~DvVvs~~~ 198 (409)
.+.+|||+.||.|.+++.+.++|+..|.++|+++ +++..+.+.... . .+|+.++... -..+|+|+..+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECCC
Confidence 4579999999999999999999998999999999 999888886421 1 6888876522 236999999754
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.51 E-value=0.0088 Score=57.49 Aligned_cols=98 Identities=23% Similarity=0.274 Sum_probs=64.9
Q ss_pred HHhccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-----cC
Q 015306 114 IYQNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-----EL 185 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~ 185 (409)
+.......++.+||.+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++. |.. .++..+-.++ ..
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHHh
Confidence 33345678899999999986 788888888 6887899999999 88887653 332 2222211111 11
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+.+|+|+-.. + . ...+....+.|+++|+++.
T Consensus 255 ~~gg~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 255 TDGGVNFALEST-G----S----PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp TTSCEEEEEECS-C----C----HHHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 124799998532 1 1 2345666689999999874
No 308
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.38 E-value=0.0085 Score=58.55 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcCCCChHHHHHH-Hc-C-CCEEEEEecHH-HHHHHHHHHHH--cCCC-CcEEEEEccccc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCA-KA-G-AAHVYAVECSQ-MANMAKQIVEA--NGFS-NVITVLKGKIEE 182 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la-~~-g-~~~V~~vD~s~-~~~~a~~~~~~--~~~~-~~i~~~~~d~~~ 182 (409)
..++.+|+||||+.|..+..++ +. | ..+|+++|+++ ..+.+++++.. |+.. ++++++..-+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 3688999999999999999888 43 4 37999999999 99999999988 4333 568888766654
No 309
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.22 E-value=0.048 Score=51.09 Aligned_cols=121 Identities=7% Similarity=0.051 Sum_probs=82.9
Q ss_pred HhHHHHHHHHHhccCCCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC--CCcEEEEEcccc
Q 015306 105 VRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF--SNVITVLKGKIE 181 (409)
Q Consensus 105 ~r~~~~~~~l~~~~~~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~ 181 (409)
.|+..+.+.+..... .....|++||||-=..+..+......+|+-||. | +++..++.+...+. ..+..++.+|+.
T Consensus 86 ~Rt~~~d~~v~~~~~-~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~ 163 (310)
T 2uyo_A 86 VRTNFFDTYFNNAVI-DGIRQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLR 163 (310)
T ss_dssp HHHHHHHHHHHHHHH-TTCCEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHH-hCCCeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchH
Confidence 344444444443322 123579999999877755544211358999995 6 88888888876542 467899999998
Q ss_pred ccc---------CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 182 EIE---------LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 182 ~~~---------~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
+ . +.....=+++++.+.+++.. .....+++.+...+.||+.++...
T Consensus 164 d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 164 Q-DWPPALRSAGFDPSARTAWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp S-CHHHHHHHTTCCTTSCEEEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred h-hHHHHHHhccCCCCCCEEEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEe
Confidence 7 3 12245668888877666654 467889999988889999988654
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.07 E-value=0.01 Score=57.68 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=63.8
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-----c--CCC
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-----E--LPV 187 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~--~~~ 187 (409)
....+|.+||.+|||. |.++..+|+ .|+.+|+++|.++ .++.+++ .|. +++..+-.++ . ...
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF----ETIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC----EEEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC----cEEcCCCcchHHHHHHHHhCC
Confidence 5678899999999987 888888888 6877999999998 7777654 343 2332221111 1 122
Q ss_pred CceeEEEEeccccccc-C-----hhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLL-F-----ENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~-~-----~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+|+|+-.. +.... + .......+....++|++||+++.
T Consensus 253 ~g~Dvvid~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 253 PEVDCGVDAV-GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp SCEEEEEECS-CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred CCCCEEEECC-CCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 3699998532 11000 0 00012345666689999999874
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.01 E-value=0.009 Score=56.50 Aligned_cols=69 Identities=9% Similarity=0.086 Sum_probs=54.5
Q ss_pred CCEEEEEcCCCChHHHHHHHcCC--CEE-EEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---CCCceeEEEE
Q 015306 123 DKVVLDVGAGTGILSLFCAKAGA--AHV-YAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDIIIS 195 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~g~--~~V-~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~DvVvs 195 (409)
..+|+|+.||.|.+++.+.++|. ..| .++|+++ +++..+.+... .++.+|+.++.. +...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-------~~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-------EVQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-------CCBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-------CcccCChhhcCHHHhccCCCCEEEe
Confidence 45899999999999999999884 677 8999999 98888887632 156788887752 2236999998
Q ss_pred ecc
Q 015306 196 EWM 198 (409)
Q Consensus 196 ~~~ 198 (409)
.+.
T Consensus 83 gpP 85 (327)
T 3qv2_A 83 SPP 85 (327)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 312
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.94 E-value=0.034 Score=54.10 Aligned_cols=98 Identities=18% Similarity=0.102 Sum_probs=62.2
Q ss_pred CCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc------CCCCc
Q 015306 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPVTK 189 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 189 (409)
...+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ -++.+++. |.. .++..+-.++. .....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 578899999999875 777888888 6888999999999 88887654 332 22222111111 12247
Q ss_pred eeEEEEecccccccCh-hHHHHHHHHHHhcccCCeEEEcc
Q 015306 190 VDIIISEWMGYFLLFE-NMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|+|+-.. ... .....++..+.+.++++|+++..
T Consensus 283 ~D~vid~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 283 AKLFLEAT-----GVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CSEEEECS-----SCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCEEEECC-----CCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 99998521 111 13334444444556999998743
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.82 E-value=0.01 Score=57.15 Aligned_cols=97 Identities=22% Similarity=0.290 Sum_probs=63.2
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-c----CCCCc
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E----LPVTK 189 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~----~~~~~ 189 (409)
....+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ ..+.+++. |....+.....|..+. . ...+.
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 4578899999999876 778888888 6888999999999 88877663 4321111111121111 0 22248
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+|+-.. + . ...+....++|++||+++.
T Consensus 254 ~Dvvid~~-G----~----~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 254 VDVVIECA-G----V----AETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp EEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECC-C----C----HHHHHHHHHHhccCCEEEE
Confidence 99998521 1 1 1345566689999999874
No 314
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.80 E-value=0.036 Score=51.56 Aligned_cols=106 Identities=17% Similarity=0.162 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCCChHHHHHHH----cC-CC--EEEEEecHH----------HHHHHHHHHHHcC-C-CC--cEEEEEccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAK----AG-AA--HVYAVECSQ----------MANMAKQIVEANG-F-SN--VITVLKGKI 180 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~----~g-~~--~V~~vD~s~----------~~~~a~~~~~~~~-~-~~--~i~~~~~d~ 180 (409)
+.-+|||+|-|+|...+...+ .+ .. +++++|..+ ..+.......... + .. .+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 446899999999976543332 22 22 567777521 1222222222211 0 12 246788898
Q ss_pred cccc--CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 181 EEIE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 181 ~~~~--~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+.- ++..+||+|+.+.+...-..+---+.++..+.++++|||++.-
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 7643 3445899999876433222222236899999999999999873
No 315
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.77 E-value=0.018 Score=53.54 Aligned_cols=71 Identities=15% Similarity=0.094 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHcCCCE--EEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC----CCceeEE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAKAGAAH--VYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP----VTKVDII 193 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~~g~~~--V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~DvV 193 (409)
....+|+|+.||.|.+++.+.++|... |.++|+++ +++..+.+.. + ..++.+|+.++... .+.+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----~-~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-----G-KIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-----T-CEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-----C-CceeCCChHHccHHHhcccCCcCEE
Confidence 456699999999999999999999766 79999999 8877666542 2 46788999887521 1469999
Q ss_pred EEec
Q 015306 194 ISEW 197 (409)
Q Consensus 194 vs~~ 197 (409)
+..+
T Consensus 88 ~ggp 91 (295)
T 2qrv_A 88 IGGS 91 (295)
T ss_dssp EECC
T ss_pred EecC
Confidence 9864
No 316
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.71 E-value=0.011 Score=55.77 Aligned_cols=68 Identities=25% Similarity=0.219 Sum_probs=55.2
Q ss_pred CEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC-CCceeEEEEecc
Q 015306 124 KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP-VTKVDIIISEWM 198 (409)
Q Consensus 124 ~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~DvVvs~~~ 198 (409)
.+|||+-||.|.+++-+.++|..-|.++|+++ +++.-+.+.. -+++.+|+.++... -..+|+++..+.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 37999999999999999999998899999999 8887776642 25788999987632 257999998643
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.68 E-value=0.0075 Score=57.23 Aligned_cols=69 Identities=19% Similarity=0.211 Sum_probs=54.2
Q ss_pred CEEEEEcCCCChHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---CCCceeEEEEec
Q 015306 124 KVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDIIISEW 197 (409)
Q Consensus 124 ~~VLDlGcG~G~l~~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~DvVvs~~ 197 (409)
.+|+|+.||.|.+++.+.++|. ..|.++|+++ +++..+.+... ..++.+|+.++.. +...+|+++..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhccCCCCEEEecC
Confidence 4799999999999999999886 6789999999 88877776532 3467889888752 223699999865
Q ss_pred c
Q 015306 198 M 198 (409)
Q Consensus 198 ~ 198 (409)
.
T Consensus 78 P 78 (333)
T 4h0n_A 78 P 78 (333)
T ss_dssp C
T ss_pred C
Confidence 3
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.58 E-value=0.021 Score=54.40 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=63.0
Q ss_pred ccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc------CCC
Q 015306 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPV 187 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 187 (409)
.....+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++. |.. .++..+-.++. ...
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t~g 233 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKATDG 233 (352)
T ss_dssp HTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHHTTT
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHHcCC
Confidence 35678899999999876 788888888 6777899999998 88877663 432 22222111111 122
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+|+|+-.. + .. ..+....+.|+++|+++.
T Consensus 234 ~g~D~v~d~~-g----~~----~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 234 KGVDKVVIAG-G----DV----HTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp CCEEEEEECS-S----CT----THHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECC-C----Ch----HHHHHHHHHHhcCCEEEE
Confidence 4799998521 1 11 234555688999999873
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.53 E-value=0.033 Score=53.11 Aligned_cols=94 Identities=29% Similarity=0.251 Sum_probs=62.1
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc---cccc----c-CC
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK---IEEI----E-LP 186 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d---~~~~----~-~~ 186 (409)
....+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+ ..++ . ..
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHHh
Confidence 4578899999999886 788888888 6777999999998 7777764 3443 223222 1111 0 11
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+|+|+-.. + . ...+....++|+++|+++.
T Consensus 240 ~~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 240 GCKPEVTIECT-G----A----EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp TSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEE
T ss_pred CCCCCEEEECC-C----C----hHHHHHHHHHhcCCCEEEE
Confidence 15799998532 1 1 1234555688999999874
No 320
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.48 E-value=0.0031 Score=74.89 Aligned_cols=101 Identities=16% Similarity=0.055 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHH-cC-----CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCCCCceeE
Q 015306 121 FKDKVVLDVGAGTGILSLFCAK-AG-----AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDI 192 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~l~~~la~-~g-----~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~Dv 192 (409)
.+..+|||||.|+|..+..+.+ .+ ..+++..|+|+ ..+.|++.+.... ++.-..|..+. .+....||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccccccccCCCCceeE
Confidence 3567999999999977655544 22 34789999999 8888887776421 33322233221 123467999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|++..+ ++....+...+..++++|||||.++..
T Consensus 1315 via~~v---l~~t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1315 LVCNCA---LATLGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp EEEECC-----------------------CCEEEEE
T ss_pred EEEccc---ccccccHHHHHHHHHHhcCCCcEEEEE
Confidence 998543 555567778889999999999998764
No 321
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.38 E-value=0.028 Score=53.78 Aligned_cols=97 Identities=23% Similarity=0.225 Sum_probs=64.1
Q ss_pred ccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--ccccc------C
Q 015306 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEEIE------L 185 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~~~------~ 185 (409)
.....+|.+||-+|+|. |.++..+|+ .|+..|+++|.++ -++.+++. .. ..+.+...+ ..++. .
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHHh
Confidence 35578899999999976 788888888 6886799999999 88888875 21 213332111 11111 1
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
....+|+|+-.. .. +..+....++|++||+++.
T Consensus 249 ~g~g~Dvvid~~-----g~----~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 249 GGIEPAVALECT-----GV----ESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp SSCCCSEEEECS-----CC----HHHHHHHHHHSCTTCEEEE
T ss_pred CCCCCCEEEECC-----CC----hHHHHHHHHHhcCCCEEEE
Confidence 235799998522 11 1234556689999999874
No 322
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.38 E-value=0.093 Score=47.58 Aligned_cols=103 Identities=18% Similarity=0.238 Sum_probs=69.3
Q ss_pred CCEEEEEcCCCChHHHHHHHc--------CCCEEEEEecHH-HH------------------------HHHHHHHH----
Q 015306 123 DKVVLDVGAGTGILSLFCAKA--------GAAHVYAVECSQ-MA------------------------NMAKQIVE---- 165 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~--------g~~~V~~vD~s~-~~------------------------~~a~~~~~---- 165 (409)
+..|+|+|+-.|..+..++.. ...+|+++|.-+ +- +..++.+.
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 348999999999888876652 247999999322 11 11222221
Q ss_pred --HcCC-CCcEEEEEccccccc------CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCC
Q 015306 166 --ANGF-SNVITVLKGKIEEIE------LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 166 --~~~~-~~~i~~~~~d~~~~~------~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
..+. .++|+++.+++.+.- .+.+++|+|..+. + . ++ .....++.+...|+|||++++..+
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D--~-Y~-~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-D--L-YE-PTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-C--C-HH-HHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-c--c-cc-hHHHHHHHHHHHhCCCcEEEEcCC
Confidence 2343 478999999997742 2345799999864 2 1 22 334567888899999999998764
No 323
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.36 E-value=0.0032 Score=59.57 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=48.3
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (409)
..+|..|||..||+|..+..+.+.|. +.+|+|+++ .++.+++++...+.. ...+..|+.++
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i 311 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRI 311 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHH
Confidence 47889999999999999999998865 999999999 999999988765532 33444444443
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.34 E-value=0.033 Score=53.25 Aligned_cols=97 Identities=22% Similarity=0.152 Sum_probs=63.0
Q ss_pred HHHhccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 113 VIYQNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
++.......+|.+||-+|+|. |.++..+++ .|+ +|++++.++ -++.+++. |.. .++..+..++.
T Consensus 180 al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~ 251 (363)
T 3uog_A 180 ALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYA 251 (363)
T ss_dssp HHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHH
Confidence 333445678899999999876 778888888 677 999999998 88777653 432 22322211111
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+-.. + . . .+....+.|+++|+++.
T Consensus 252 ~~~g~g~D~vid~~-g----~-~----~~~~~~~~l~~~G~iv~ 285 (363)
T 3uog_A 252 LTGDRGADHILEIA-G----G-A----GLGQSLKAVAPDGRISV 285 (363)
T ss_dssp HHTTCCEEEEEEET-T----S-S----CHHHHHHHEEEEEEEEE
T ss_pred HhCCCCceEEEECC-C----h-H----HHHHHHHHhhcCCEEEE
Confidence 1224799998632 1 1 1 23445578999999874
No 325
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.32 E-value=0.024 Score=53.63 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=62.8
Q ss_pred ccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCc
Q 015306 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTK 189 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 189 (409)
.....++.+||-+|+|. |.++..+++ .|+ +|+++|.++ .++.+++ .|.. .++..+-.++. ...+.
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~g~ 232 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKEIGG 232 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHSS
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHhCCC
Confidence 34678899999999986 888888888 677 999999999 8887765 3432 12222111111 01137
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+|+|+-... . ...+....+.|+++|+++..
T Consensus 233 ~d~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 233 AHGVLVTAV-----S----PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEEESSC-----C----HHHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEEeCC-----C----HHHHHHHHHHhccCCEEEEe
Confidence 899985321 1 23455666899999998743
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.28 E-value=0.03 Score=54.26 Aligned_cols=101 Identities=23% Similarity=0.189 Sum_probs=64.4
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc-----cc--CCC
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-----IE--LPV 187 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-----~~--~~~ 187 (409)
....+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|. +++...-.+ +. ...
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhCC
Confidence 4678899999999876 788888888 6887899999999 8887764 343 223221111 11 122
Q ss_pred CceeEEEEecccccc-------cChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFL-------LFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l-------~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+|+|+-.. +.-. .+.......+....++|++||+++.
T Consensus 253 ~g~Dvvid~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 253 PEVDCAVDAV-GFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp SCEEEEEECC-CTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECC-CCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 4799998632 2100 0001122345666789999999874
No 327
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.26 E-value=0.024 Score=48.98 Aligned_cols=96 Identities=19% Similarity=0.198 Sum_probs=57.9
Q ss_pred HHhccCCCCCCEEEEEcCC--CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc----c-
Q 015306 114 IYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG--~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~- 184 (409)
+.......++++||..|++ .|..+..+++ .|+ +|+++|.++ ..+.+++ .+.. . ++..+-.+. .
T Consensus 30 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 30 LCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE--Y-VGDSRSVDFADEILE 101 (198)
T ss_dssp HHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS--E-EEETTCSTHHHHHHH
T ss_pred HHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC--E-EeeCCcHHHHHHHHH
Confidence 3333467789999999953 3555555555 676 899999998 7766543 3432 1 121111111 0
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+... + . ..+....+.|+|+|+++.
T Consensus 102 ~~~~~~~D~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 102 LTDGYGVDVVLNSL-A-----G----EAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp HTTTCCEEEEEECC-C-----T----HHHHHHHHTEEEEEEEEE
T ss_pred HhCCCCCeEEEECC-c-----h----HHHHHHHHHhccCCEEEE
Confidence 1224699999642 1 1 235566689999999874
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.17 E-value=0.019 Score=55.23 Aligned_cols=98 Identities=22% Similarity=0.218 Sum_probs=64.0
Q ss_pred HHhccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--cccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEEI----- 183 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~~----- 183 (409)
+.......++.+||-+|+|. |.++..+|+ .|+.+|+++|.++ -++.+++ .|.. .++... -.++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHH
Confidence 33445678899999999975 788888888 6888999999999 8887764 3432 222211 0111
Q ss_pred cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCC-eEEEc
Q 015306 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 184 ~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (409)
....+.+|+|+-.. + . ...+....+.|++| |+++.
T Consensus 258 ~~~~gg~D~vid~~-g----~----~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 258 DLTDGGVDYSFECI-G----N----VSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp HHTTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred HhcCCCCCEEEECC-C----C----HHHHHHHHHHhhccCCEEEE
Confidence 01224899998521 1 1 23455666899996 98874
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.17 E-value=0.039 Score=52.93 Aligned_cols=96 Identities=21% Similarity=0.173 Sum_probs=62.7
Q ss_pred hccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc-----ccc-c-cC
Q 015306 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK-----IEE-I-EL 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d-----~~~-~-~~ 185 (409)
......++.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+ +.+ + ..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~ 257 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEK 257 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHH
Confidence 345678899999999875 777888888 6877999999998 8777764 3442 122211 111 1 01
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCC-eEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (409)
..+.+|+|+-.. + . ...+....++|+++ |+++.
T Consensus 258 t~gg~Dvvid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 258 TNGGVDYAVECA-G----R----IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp TTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCCEEEE
Confidence 124799998521 1 1 23355666899999 99874
No 330
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.16 E-value=0.038 Score=51.62 Aligned_cols=89 Identities=21% Similarity=0.149 Sum_probs=59.8
Q ss_pred hccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
......+|.+||-+|+|. |.++..+|+ .|+ +|++++ ++ -.+.+++. |. -.++. |...+ ...+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga---~~v~~-d~~~v---~~g~Dv 202 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GV---RHLYR-EPSQV---TQKYFA 202 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TE---EEEES-SGGGC---CSCEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CC---CEEEc-CHHHh---CCCccE
Confidence 456678999999999964 788888888 677 999999 88 88887653 32 12232 43333 478999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+-.. + . . . .....+.|+++|+++.
T Consensus 203 v~d~~-g----~-~---~-~~~~~~~l~~~G~~v~ 227 (315)
T 3goh_A 203 IFDAV-N----S-Q---N-AAALVPSLKANGHIIC 227 (315)
T ss_dssp EECC-----------------TTGGGEEEEEEEEE
T ss_pred EEECC-C----c-h---h-HHHHHHHhcCCCEEEE
Confidence 98421 1 1 1 1 1345689999999874
No 331
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.11 E-value=0.056 Score=51.31 Aligned_cols=89 Identities=21% Similarity=0.132 Sum_probs=61.4
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEE
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVv 194 (409)
....+|.+||-+|+|. |.++..+|+ .|+ +|++++.++ -.+.+++ .|... ++ .+...+ . ..+|+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~---v~-~~~~~~--~-~~~D~vi 239 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVKH---FY-TDPKQC--K-EELDFII 239 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCSE---EE-SSGGGC--C-SCEEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCCe---ec-CCHHHH--h-cCCCEEE
Confidence 3678899999999976 788888888 677 999999999 8877765 34421 22 343332 2 3899998
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
-.. + ... .+....+.|+++|+++.
T Consensus 240 d~~-g----~~~----~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 240 STI-P----THY----DLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp ECC-C----SCC----CHHHHHTTEEEEEEEEE
T ss_pred ECC-C----cHH----HHHHHHHHHhcCCEEEE
Confidence 532 1 111 23455589999999884
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.08 E-value=0.038 Score=53.03 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=62.3
Q ss_pred hccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc-----ccc-c-cC
Q 015306 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK-----IEE-I-EL 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d-----~~~-~-~~ 185 (409)
......++.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++... +.+ + ..
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~ 258 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKM 258 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHH
Confidence 345678899999999875 777888888 6777999999998 8777764 3432 222211 111 0 01
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCC-eEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (409)
..+.+|+|+-.. + . ...+....++|+++ |+++.
T Consensus 259 ~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 259 TNGGVDFSLECV-G----N----VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp HTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCCCEEEECC-C----C----HHHHHHHHHHhhcCCcEEEE
Confidence 124799998532 1 1 13355666899999 99874
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.05 E-value=0.046 Score=52.42 Aligned_cols=96 Identities=23% Similarity=0.274 Sum_probs=62.5
Q ss_pred hccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc-----ccc-c-cC
Q 015306 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK-----IEE-I-EL 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d-----~~~-~-~~ 185 (409)
......++.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++. |.. .++... +.+ + ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHHHH
Confidence 345678899999999875 677778887 6877999999998 88877643 432 122211 111 0 01
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCC-eEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (409)
..+.+|+|+-.. + . ...+....++|+++ |+++.
T Consensus 257 ~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 257 TDGGVDYSFECI-G----N----VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp TTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCCCEEEECC-C----c----HHHHHHHHHhhccCCcEEEE
Confidence 124799998532 1 1 13355666899999 99874
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.92 E-value=0.043 Score=52.67 Aligned_cols=96 Identities=22% Similarity=0.240 Sum_probs=62.2
Q ss_pred hccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc-----ccc-cc-C
Q 015306 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK-----IEE-IE-L 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d-----~~~-~~-~ 185 (409)
......++.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+ +.+ +. .
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~~ 261 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITEL 261 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHHH
Confidence 345678899999999875 777888888 6777999999998 7777754 3432 122211 111 00 1
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCC-eEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (409)
..+.+|+|+-.. + . ...+....++|+++ |+++.
T Consensus 262 ~~~g~Dvvid~~-G----~----~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 262 TAGGVDYSLDCA-G----T----AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp HTSCBSEEEESS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCccEEEECC-C----C----HHHHHHHHHHhhcCCCEEEE
Confidence 124799998521 1 1 23455666899999 99874
No 335
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.91 E-value=0.047 Score=52.27 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=59.6
Q ss_pred CCCEEEEEc-CCC-ChHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc--cccc-c-cCCCCceeEE
Q 015306 122 KDKVVLDVG-AGT-GILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG--KIEE-I-ELPVTKVDII 193 (409)
Q Consensus 122 ~~~~VLDlG-cG~-G~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~--d~~~-~-~~~~~~~DvV 193 (409)
++.+||-+| +|. |.++..+|+. +..+|++++.++ -++.+++ .|.. .++.. +..+ + ....+.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHHHHHHhcCCCceEE
Confidence 788999998 554 8889999985 666999999998 8877765 3432 12221 1111 1 1223579999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+-.. + -...+....++|+++|+++..
T Consensus 244 id~~--------g-~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 FSTT--------H-TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EECS--------C-HHHHHHHHHHHSCTTCEEEEC
T ss_pred EECC--------C-chhhHHHHHHHhcCCCEEEEE
Confidence 8521 1 123456666899999998843
No 336
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.87 E-value=0.053 Score=52.00 Aligned_cols=96 Identities=20% Similarity=0.254 Sum_probs=61.9
Q ss_pred hccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc-----ccc-c-cC
Q 015306 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK-----IEE-I-EL 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d-----~~~-~-~~ 185 (409)
......++.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+ +.+ + ..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~ 257 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEM 257 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHH
Confidence 345678899999999875 777778887 6777999999998 8777754 3432 122211 111 0 01
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCC-eEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (409)
..+.+|+|+-.. + . ...+....++|+++ |+++.
T Consensus 258 ~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 258 SNGGVDFSFEVI-G----R----LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp TTSCBSEEEECS-C----C----HHHHHHHHHHBCTTTCEEEE
T ss_pred hCCCCcEEEECC-C----C----HHHHHHHHHHhhcCCcEEEE
Confidence 124799998532 1 1 13345566889999 99874
No 337
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.80 E-value=0.04 Score=52.21 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=62.5
Q ss_pred CCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--ccc-cc--CCCCce
Q 015306 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEE-IE--LPVTKV 190 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~-~~--~~~~~~ 190 (409)
...++.+||-+|+|. |.++..+++ .|..+|+++|.++ -++.+++ .|... ++..+ ..+ +. .....+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADA---AVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSE---EEECSTTHHHHHHHHHGGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCE---EEcCCCcHHHHHHHHhCCCCC
Confidence 568899999999976 788888888 5677999999999 8887765 34432 22221 111 00 112479
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
|+|+-.. .. +..+....+.|+++|+++..
T Consensus 241 d~v~d~~-----G~----~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 241 TAVFDFV-----GA----QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEESS-----CC----HHHHHHHHHHEEEEEEEEEC
T ss_pred eEEEECC-----CC----HHHHHHHHHHHhcCCEEEEE
Confidence 9998521 11 13456666899999998743
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.79 E-value=0.038 Score=52.29 Aligned_cols=96 Identities=17% Similarity=0.092 Sum_probs=61.2
Q ss_pred HHhccCCCCCCEEEEEcCCC--ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGAGT--GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG~--G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
+.......++.+||-+|+|+ |.++..+++ .|+ +|++++.++ .++.+++. |.. .++...-.++.
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~~~ 207 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETVME 207 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHHHH
Confidence 33446678999999999974 677777777 677 999999998 88877763 332 12222111111
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+... + .. .... ..+.|+++|+++.
T Consensus 208 ~~~~~g~Dvvid~~-g-----~~---~~~~-~~~~l~~~G~iv~ 241 (340)
T 3gms_A 208 LTNGIGADAAIDSI-G-----GP---DGNE-LAFSLRPNGHFLT 241 (340)
T ss_dssp HTTTSCEEEEEESS-C-----HH---HHHH-HHHTEEEEEEEEE
T ss_pred HhCCCCCcEEEECC-C-----Ch---hHHH-HHHHhcCCCEEEE
Confidence 1234799998632 1 11 1222 3378999999874
No 339
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.55 E-value=0.06 Score=53.51 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=55.3
Q ss_pred CCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCC---------------
Q 015306 123 DKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP--------------- 186 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~--------------- 186 (409)
..+|+|+.||.|.+++-+.++|...|.++|+++ +++.-+.+.... ....++.+|+.++...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhh
Confidence 358999999999999999999988899999999 887777664211 1235677898876521
Q ss_pred --CCceeEEEEecc
Q 015306 187 --VTKVDIIISEWM 198 (409)
Q Consensus 187 --~~~~DvVvs~~~ 198 (409)
...+|+|+..+.
T Consensus 165 ~~~~~~Dvl~gGpP 178 (482)
T 3me5_A 165 QHIPEHDVLLAGFP 178 (482)
T ss_dssp HHSCCCSEEEEECC
T ss_pred hcCCCCCEEEecCC
Confidence 146899998754
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.50 E-value=0.053 Score=51.53 Aligned_cols=93 Identities=24% Similarity=0.220 Sum_probs=60.0
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc-cc----cc--CC-
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI-EE----IE--LP- 186 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-~~----~~--~~- 186 (409)
....++.+||-+|+|. |.++..+++ .|+ +|+++|.++ .++.+++ .|.. .++..+- .+ +. ..
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhcc
Confidence 4567899999999875 777778887 677 599999998 8777764 3443 2222110 11 11 11
Q ss_pred --CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 --VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 --~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+|+|+-.. + . ...+....++|+++|+++.
T Consensus 236 ~~g~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 236 AIGDLPNVTIDCS-G----N----EKCITIGINITRTGGTLML 269 (352)
T ss_dssp HSSSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEE
T ss_pred ccCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 25699998532 1 1 1234555688999999874
No 341
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.46 E-value=0.062 Score=50.59 Aligned_cols=97 Identities=20% Similarity=0.115 Sum_probs=59.2
Q ss_pred HHhccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
+.......++++||..|+ |.|..+..+++ .|+ +|+++|.++ .++.+++ .+.. ..+-..+..++.
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKK 209 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHH
Confidence 334456788999999998 34566666666 677 999999988 7776633 2332 112111101110
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+.+|+++... + . ..+....+.|++||+++.
T Consensus 210 ~~~~~~d~vi~~~-g-------~--~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 210 ASPDGYDCYFDNV-G-------G--EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp HCTTCEEEEEESS-C-------H--HHHHHHHTTEEEEEEEEE
T ss_pred HhCCCCeEEEECC-C-------h--HHHHHHHHHHhcCCEEEE
Confidence 1125799998643 1 1 125566689999999874
No 342
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.31 E-value=0.042 Score=52.74 Aligned_cols=92 Identities=25% Similarity=0.213 Sum_probs=59.8
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc-c-cCCCCceeE
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-I-ELPVTKVDI 192 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-~~~~~~~Dv 192 (409)
....+|.+||-+|+|. |.++..+|+ .|+ +|++++.++ .++.+++ .|.. .++...-.+ . ... +.+|+
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~-~g~Dv 260 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAHL-KSFDF 260 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTTT-TCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHhh-cCCCE
Confidence 3577899999999985 778888888 666 699999998 8887765 2432 222221111 1 112 57999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+-.. + ... .+....+.|+++|+++.
T Consensus 261 vid~~-g----~~~----~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 261 ILNTV-A----APH----NLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp EEECC-S----SCC----CHHHHHTTEEEEEEEEE
T ss_pred EEECC-C----CHH----HHHHHHHHhccCCEEEE
Confidence 98532 1 111 23445588999999874
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.26 E-value=0.081 Score=49.97 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=61.3
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---CCCCcee
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D 191 (409)
....++.+||-.|+|. |.++..+++ .|+..++++|.++ -++.+++ .|....+.....+..+.. .....+|
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 5668899999999976 567777777 7888899999999 8777765 354321211111211111 1224678
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+... + . ...++...++|++||.++.
T Consensus 232 ~v~d~~-G----~----~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 232 LILETA-G----V----PQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp EEEECS-C----S----HHHHHHHHHHCCTTCEEEE
T ss_pred cccccc-c----c----cchhhhhhheecCCeEEEE
Confidence 887521 1 1 2344555688999999874
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.24 E-value=0.15 Score=48.30 Aligned_cols=94 Identities=28% Similarity=0.273 Sum_probs=60.2
Q ss_pred ccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc------CCC
Q 015306 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPV 187 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 187 (409)
.... ++.+||-+|+|. |.++..+++ .|+.+|++++.++ .++.+++. |.. .++..+-.++. ...
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTT
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEECCCCcCHHHHHHHHcCC
Confidence 3456 899999999964 677777777 6776899999998 87777643 332 12222111110 122
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+|+|+... + . ...+....+.|+++|+++.
T Consensus 235 ~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 235 NGVDVFLEFS-G----A----PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp SCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 4699998632 1 1 1334556688999999874
No 345
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.24 E-value=0.047 Score=51.46 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=62.0
Q ss_pred HHHhccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----
Q 015306 113 VIYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---- 184 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 184 (409)
++.......++++||-.|+ |.|..+..+++ .|+ +|++++.++ -++.+.+ ..|.. .++...-.++.
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVE---ELGFD---GAIDYKNEDLAAGLK 212 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TTCCS---EEEETTTSCHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCCC---EEEECCCHHHHHHHH
Confidence 3434466789999999998 34677777777 677 999999988 7776622 23432 12221111110
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+.+|+|+... + . ..+....+.|+++|+++.
T Consensus 213 ~~~~~~~d~vi~~~-g-------~--~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 213 RECPKGIDVFFDNV-G-------G--EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp HHCTTCEEEEEESS-C-------H--HHHHHHHTTEEEEEEEEE
T ss_pred HhcCCCceEEEECC-C-------c--chHHHHHHHHhhCCEEEE
Confidence 1135799998632 1 1 245666789999999884
No 346
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.23 E-value=0.092 Score=50.50 Aligned_cols=94 Identities=24% Similarity=0.293 Sum_probs=60.8
Q ss_pred cC-CCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc---cccc----c--
Q 015306 118 KF-LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK---IEEI----E-- 184 (409)
Q Consensus 118 ~~-~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d---~~~~----~-- 184 (409)
.. ..+|.+||-+|+|. |.++..+|+ .|+.+|++++.++ .++.+++ .|.. .++..+ -.++ .
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDI 262 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHH
Confidence 45 67899999999764 777788887 6756999999998 8777764 3442 223322 1111 0
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+-.. + .. ..+....++|+++|+++.
T Consensus 263 ~~g~g~Dvvid~~-g----~~----~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 263 THGRGADFILEAT-G----DS----RALLEGSELLRRGGFYSV 296 (380)
T ss_dssp TTTSCEEEEEECS-S----CT----THHHHHHHHEEEEEEEEE
T ss_pred hCCCCCcEEEECC-C----CH----HHHHHHHHHHhcCCEEEE
Confidence 1223799998532 1 11 234455688999999874
No 347
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.08 E-value=0.075 Score=50.36 Aligned_cols=89 Identities=20% Similarity=0.266 Sum_probs=57.0
Q ss_pred CCCEEEEEc-CCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--ccc-c-cCCCCceeEE
Q 015306 122 KDKVVLDVG-AGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEE-I-ELPVTKVDII 193 (409)
Q Consensus 122 ~~~~VLDlG-cG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~-~-~~~~~~~DvV 193 (409)
++.+||-+| +|. |.++..+++ .|+ +|++++.++ -++.+++. |.. .++..+ ..+ + ......+|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM----GAD---IVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH----TCS---EEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc---EEEECCccHHHHHHHhCCCCccEE
Confidence 799999994 543 777778887 677 999999988 88887763 332 122111 100 0 0123579999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+-.. + -...+....++|+++|+++.
T Consensus 222 ~d~~--------g-~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 222 FCTF--------N-TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EESS--------C-HHHHHHHHHHHEEEEEEEEE
T ss_pred EECC--------C-chHHHHHHHHHhccCCEEEE
Confidence 8521 1 12345566688999999863
No 348
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.06 E-value=0.08 Score=55.26 Aligned_cols=107 Identities=13% Similarity=0.093 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHc----------C---CCEEEEEecHH-HHHHHHH--------------HHHHc-----C
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA----------G---AAHVYAVECSQ-MANMAKQ--------------IVEAN-----G 168 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~----------g---~~~V~~vD~s~-~~~~a~~--------------~~~~~-----~ 168 (409)
+..+|+|+|.|+|...+.+.+. . .-+++++|..| ..+.+++ .+... |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4569999999999877666552 1 14799999955 3333332 12111 1
Q ss_pred -----CCC---cEEEEEccccccc--CC---CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 169 -----FSN---VITVLKGKIEEIE--LP---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 169 -----~~~---~i~~~~~d~~~~~--~~---~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+.+ .++++.+|+.+.- +. ...+|.++.+.+......+--...++..+.++++|||.+...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 111 4678888887643 21 368999998754222222222367888899999999998743
No 349
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.03 E-value=0.067 Score=50.62 Aligned_cols=92 Identities=20% Similarity=0.111 Sum_probs=59.3
Q ss_pred cCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc----c--CCC
Q 015306 118 KFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E--LPV 187 (409)
Q Consensus 118 ~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~--~~~ 187 (409)
....++.+||-+|+ |.|..+..+++ .|+ +|++++.++ .++.+++. |.. .++...-.++ . ...
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----ga~---~~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL----GAD---ETVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTSTTHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc----CCC---EEEcCCcccHHHHHHHHhCC
Confidence 45678999999998 56777777777 676 999999998 88777642 332 1222111111 0 122
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+|+|+... + . . .+....+.|+++|+++.
T Consensus 234 ~~~d~vi~~~-g----~-~----~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 234 KGADKVVDHT-G----A-L----YFEGVIKATANGGRIAI 263 (343)
T ss_dssp TCEEEEEESS-C----S-S----SHHHHHHHEEEEEEEEE
T ss_pred CCceEEEECC-C----H-H----HHHHHHHhhccCCEEEE
Confidence 4799998642 1 1 1 24455678999999874
No 350
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.93 E-value=0.14 Score=47.97 Aligned_cols=97 Identities=21% Similarity=0.194 Sum_probs=61.5
Q ss_pred HHhccCCCCCCEEEEEcC-C-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGc-G-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
+.......++.+||-.|+ | .|.++..+++ .|+ +|++++.++ -++.+++. |.. .++..+-.++.
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----GAW---ETIDYSHEDVAKRVLE 203 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC---EEEeCCCccHHHHHHH
Confidence 334456788999999983 3 4777777777 677 999999998 88877653 322 22222211111
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.....+|+|+... + . ..+....+.|+++|+++..
T Consensus 204 ~~~~~g~Dvvid~~-g----~-----~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 204 LTDGKKCPVVYDGV-G----Q-----DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HTTTCCEEEEEESS-C----G-----GGHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCceEEEECC-C----h-----HHHHHHHHHhcCCCEEEEE
Confidence 1235799998632 1 1 1344556899999998743
No 351
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.87 E-value=0.035 Score=52.61 Aligned_cols=90 Identities=19% Similarity=0.264 Sum_probs=59.0
Q ss_pred CCCCCCEEEEEcCCC-ChHHHHHHH-c--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc----c-cccccCCCC
Q 015306 119 FLFKDKVVLDVGAGT-GILSLFCAK-A--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG----K-IEEIELPVT 188 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~l~~~la~-~--g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~----d-~~~~~~~~~ 188 (409)
.. ++.+||-+|+|. |.++..+|+ . |+ +|++++.++ .++.+++. |.. .++.. + +..+. ...
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~-~g~ 237 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLT-DGL 237 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHH-TTC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhh-cCC
Confidence 55 899999999975 777888887 5 76 799999998 88877653 332 12211 1 11111 123
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+|+|+-.. + . ...+....++|+++|+++.
T Consensus 238 g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 238 GASIAIDLV-G----T----EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp CEEEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CccEEEECC-C----C----hHHHHHHHHHhhcCCEEEE
Confidence 799998532 1 1 1235556688999999874
No 352
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.74 E-value=0.1 Score=49.80 Aligned_cols=92 Identities=23% Similarity=0.203 Sum_probs=60.0
Q ss_pred cCCCCCCEEEEEc--CCCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----CCCC
Q 015306 118 KFLFKDKVVLDVG--AGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVT 188 (409)
Q Consensus 118 ~~~~~~~~VLDlG--cG~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 188 (409)
....++.+||-+| .|.|.++..+++ .|+ +|++++.++ .++.+++ .|.. .++..+-.++. ....
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhcCC
Confidence 4567899999999 345788888888 677 899999998 7777665 3432 12222111110 1125
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+|+|+... + . ..+....+.|+++|+++.
T Consensus 231 g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 231 GVDVVYESV-G----G-----AMFDLAVDALATKGRLIV 259 (362)
T ss_dssp CEEEEEECS-C----T-----HHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEECC-C----H-----HHHHHHHHHHhcCCEEEE
Confidence 799998632 1 1 245566688999999873
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.72 E-value=0.14 Score=48.06 Aligned_cols=94 Identities=23% Similarity=0.245 Sum_probs=59.9
Q ss_pred hccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc------C
Q 015306 116 QNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------L 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~ 185 (409)
......++.+||-+|+ |.|.++..+++ .|+ +|++++.++ -++.+++ .|.. .++..+-.++. .
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKFT 213 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHHh
Confidence 3346788999999994 34677777777 577 999999988 7777655 3432 22222211111 1
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
....+|+|+... +. ..+....+.|+++|+++.
T Consensus 214 ~~~g~D~vid~~-g~---------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 214 NGKGVDASFDSV-GK---------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp TTSCEEEEEECC-GG---------GGHHHHHHHEEEEEEEEE
T ss_pred CCCCceEEEECC-Ch---------HHHHHHHHHhccCCEEEE
Confidence 235799998632 11 234555678999999874
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.68 E-value=0.11 Score=49.28 Aligned_cols=96 Identities=26% Similarity=0.277 Sum_probs=62.5
Q ss_pred HHHhccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----
Q 015306 113 VIYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---- 184 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 184 (409)
++.......++.+||-.|+ |.|.++..+++ .|+ +|++++.++ .++.+++. |.. .++..+ .++.
T Consensus 150 ~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga~---~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----GAD---IVLPLE-EGWAKAVR 220 (342)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS---EEEESS-TTHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc---EEecCc-hhHHHHHH
Confidence 3434456788999999997 34777888887 677 999999988 77777663 332 223222 2211
Q ss_pred --CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 --LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 --~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+... + . . .+....+.|+++|+++.
T Consensus 221 ~~~~~~g~Dvvid~~-g----~-~----~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 221 EATGGAGVDMVVDPI-G----G-P----AFDDAVRTLASEGRLLV 255 (342)
T ss_dssp HHTTTSCEEEEEESC-C-----------CHHHHHHTEEEEEEEEE
T ss_pred HHhCCCCceEEEECC-c----h-h----HHHHHHHhhcCCCEEEE
Confidence 1224799998632 1 1 1 34556689999999874
No 355
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.47 E-value=0.016 Score=55.10 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=58.8
Q ss_pred ccCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----CCCC
Q 015306 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVT 188 (409)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 188 (409)
.... ++.+||-+|+|. |.++..+|+ .|+.+|++++.++ .++.+++. . + .++..+-.++. ....
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhcCC
Confidence 3456 899999999864 677777777 6776899999998 77766543 1 1 12221111110 0125
Q ss_pred ceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+|+|+-.. + . ...+....+.|+++|+++.
T Consensus 231 g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 231 GVEVLLEFS-G----N----EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp CEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 799998532 1 1 1334556688999999874
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.45 E-value=0.084 Score=49.89 Aligned_cols=97 Identities=19% Similarity=0.088 Sum_probs=60.5
Q ss_pred HHhccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-cccccc----
Q 015306 114 IYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIE---- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~---- 184 (409)
+.......++++||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++. .|.. . ++.. +..++.
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~---~g~~--~-~~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTK---FGFD--D-AFNYKEESDLTAALK 219 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---SCCS--E-EEETTSCSCSHHHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cCCc--e-EEecCCHHHHHHHHH
Confidence 333456788999999997 34677777777 676 899999998 77766532 2432 1 2211 111110
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+.+|+|+... +. ..+....+.|+++|+++.
T Consensus 220 ~~~~~~~d~vi~~~--------g~--~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 220 RCFPNGIDIYFENV--------GG--KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HHCTTCEEEEEESS--------CH--HHHHHHHTTEEEEEEEEE
T ss_pred HHhCCCCcEEEECC--------CH--HHHHHHHHHHhcCCEEEE
Confidence 1125799998642 11 245666789999999873
No 357
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.45 E-value=0.044 Score=50.84 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=57.5
Q ss_pred CCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc-ccccCCCCceeEEE
Q 015306 120 LFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI-EEIELPVTKVDIII 194 (409)
Q Consensus 120 ~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~DvVv 194 (409)
..++.+||-+|+ |.|.++..+++ .|+ +|++++.++ .++.+++ .|.. .++..+- .++.-.-+.+|+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHhcCceEEE
Confidence 778999999998 34677777777 676 999999988 7776654 3432 1222111 11110015799998
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 195 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
. . +. ..+....+.|+++|+++.
T Consensus 195 d-~-g~---------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 195 E-V-RG---------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp E-C-SC---------TTHHHHHTTEEEEEEEEE
T ss_pred E-C-CH---------HHHHHHHHhhccCCEEEE
Confidence 6 3 32 124555689999999874
No 358
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.40 E-value=0.066 Score=49.73 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=41.3
Q ss_pred CcEEEEEccccccc--CCCCceeEEEEecccccccC---------------h---hHHHHHHHHHHhcccCCeEEEccCC
Q 015306 171 NVITVLKGKIEEIE--LPVTKVDIIISEWMGYFLLF---------------E---NMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 171 ~~i~~~~~d~~~~~--~~~~~~DvVvs~~~~~~l~~---------------~---~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
.+++++++|+.+.. +++++||+|++++. |.... + ..+..++.++.++|||||.++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPP-Y~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPP-YWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCC-CCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCC-CCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 35789999998842 45689999999984 32210 1 1234577888999999999875533
No 359
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.34 E-value=0.13 Score=48.91 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=59.7
Q ss_pred HHhccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
+.......++++||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++ .+.. .++..+-.++.
T Consensus 162 l~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 162 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGAH---EVFNHREVNYIDKIKK 233 (351)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTSTTHHHHHHH
T ss_pred HHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCCC---EEEeCCCchHHHHHHH
Confidence 333456788999999997 34666666666 676 899999998 7776543 3432 12221111110
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.....+|+|+... + . ..+....++|+++|+++.-
T Consensus 234 ~~~~~~~D~vi~~~-G-------~--~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 234 YVGEKGIDIIIEML-A-------N--VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHCTTCEEEEEESC-H-------H--HHHHHHHHHEEEEEEEEEC
T ss_pred HcCCCCcEEEEECC-C-------h--HHHHHHHHhccCCCEEEEE
Confidence 1224799998642 1 1 1244556899999998743
No 360
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.25 E-value=0.14 Score=48.78 Aligned_cols=94 Identities=19% Similarity=0.157 Sum_probs=59.3
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccc-cc--cCCCCcee
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIE-EI--ELPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~-~~--~~~~~~~D 191 (409)
....++.+||-+|+|. |.++..+++ .|+ +|++++.++ .++.+++. |.. .++..+-. ++ ... +.+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSC-SCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhh-cCCC
Confidence 4677899999999864 777777777 677 799999998 88877652 332 22222111 11 112 5799
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+-.. +.. .. ..+....++|+++|+++.
T Consensus 246 ~vid~~-g~~--~~----~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 246 LIVVCA-SSL--TD----IDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp EEEECC-SCS--TT----CCTTTGGGGEEEEEEEEE
T ss_pred EEEECC-CCC--cH----HHHHHHHHHhcCCCEEEE
Confidence 998632 110 00 112344578999999874
No 361
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.19 E-value=0.26 Score=46.44 Aligned_cols=98 Identities=21% Similarity=0.048 Sum_probs=59.9
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---CCCCcee
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVD 191 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D 191 (409)
....+|.+||-+|+|. |.++..+++ .+..+|+++|.++ -++.+++ .|....+.....|..+.. .....+|
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 4567899999999987 355555555 6777999999999 7776654 343322222222222110 1234677
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
+++.... . ...+....+.|+++|.++..
T Consensus 235 ~~~~~~~-----~----~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 235 SAIVCAV-----A----RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEECCS-----C----HHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEecc-----C----cchhheeheeecCCceEEEE
Confidence 7775321 1 23345556899999998743
No 362
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.10 E-value=0.1 Score=49.44 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=58.8
Q ss_pred cCCCCCCEEEEEcCC--CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc-ccccc-----CCC
Q 015306 118 KFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK-IEEIE-----LPV 187 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG--~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d-~~~~~-----~~~ 187 (409)
....++++||.+|++ .|..+..+++ .|+ +|++++.++ .++.+++ .+.. .++... ..++. ...
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~~---~~~d~~~~~~~~~~~~~~~~ 236 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGGE---VFIDFTKEKDIVGAVLKATD 236 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTCC---EEEETTTCSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCCc---eEEecCccHhHHHHHHHHhC
Confidence 356789999999983 4666666666 676 999999988 7776654 3432 122111 11111 111
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.+|+|+... + . ...+....+.|+++|+++.
T Consensus 237 ~~~D~vi~~~-g----~----~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 237 GGAHGVINVS-V----S----EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp SCEEEEEECS-S----C----HHHHHHHTTSEEEEEEEEE
T ss_pred CCCCEEEECC-C----c----HHHHHHHHHHHhcCCEEEE
Confidence 3799998643 1 1 2345667789999999874
No 363
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.08 E-value=0.094 Score=49.51 Aligned_cols=91 Identities=19% Similarity=0.115 Sum_probs=58.6
Q ss_pred CCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----CCCCce
Q 015306 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKV 190 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~ 190 (409)
...++.+||-+|+|. |.++..+++ .|+ +|++++.++ .++.+++ .|.. .++...-.++. .. +.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~~-~~~ 231 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEKV-GGV 231 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHHH-SSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHHh-CCC
Confidence 567899999999964 777777777 676 999999998 7777654 3432 12211101110 11 469
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+|+... + . ...+....++|+++|+++.
T Consensus 232 d~vid~~-g----~----~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 232 HAAVVTA-V----S----KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp EEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CEEEECC-C----C----HHHHHHHHHHhhcCCEEEE
Confidence 9998632 1 1 1234556688999999874
No 364
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.07 E-value=0.085 Score=49.46 Aligned_cols=93 Identities=20% Similarity=0.206 Sum_probs=58.0
Q ss_pred ccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc----c--CC
Q 015306 117 NKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E--LP 186 (409)
Q Consensus 117 ~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~--~~ 186 (409)
.....++++||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++. +.. . ++..+-.+. . ..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g~~--~-~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----GAW--Q-VINYREEDLVERLKEITG 206 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TCS--E-EEETTTSCHHHHHHHHTT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCC--E-EEECCCccHHHHHHHHhC
Confidence 456778999999994 34566666666 677 999999998 77777652 322 1 222111111 0 11
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+|+|+... + . ..+....+.|+++|+++.
T Consensus 207 ~~~~D~vi~~~-g-----~----~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 207 GKKVRVVYDSV-G-----R----DTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp TCCEEEEEECS-C-----G----GGHHHHHHTEEEEEEEEE
T ss_pred CCCceEEEECC-c-----h----HHHHHHHHHhcCCCEEEE
Confidence 24699998642 1 1 234556688999999874
No 365
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.61 E-value=0.17 Score=47.49 Aligned_cols=93 Identities=19% Similarity=0.219 Sum_probs=59.0
Q ss_pred ccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc------CC
Q 015306 117 NKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LP 186 (409)
Q Consensus 117 ~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 186 (409)
.....++.+||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++. +.. . ++..+-.+.. ..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----g~~--~-~~d~~~~~~~~~i~~~~~ 211 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL----GCH--H-TINYSTQDFAEVVREITG 211 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS--E-EEETTTSCHHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC--E-EEECCCHHHHHHHHHHhC
Confidence 456778999999995 45777776666 676 999999998 87777652 322 1 2221111110 11
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+|+|+... +. ..+....+.|+++|+++.
T Consensus 212 ~~~~d~vi~~~-g~---------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 212 GKGVDVVYDSI-GK---------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp TCCEEEEEECS-CT---------TTHHHHHHTEEEEEEEEE
T ss_pred CCCCeEEEECC-cH---------HHHHHHHHhhccCCEEEE
Confidence 24699998643 21 224555688999999874
No 366
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.21 E-value=0.38 Score=44.81 Aligned_cols=94 Identities=22% Similarity=0.220 Sum_probs=58.3
Q ss_pred hccCCCCCCEEEEEc-CCC-ChHHHHHHH-cCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEccccc-ccCCCCcee
Q 015306 116 QNKFLFKDKVVLDVG-AGT-GILSLFCAK-AGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEE-IELPVTKVD 191 (409)
Q Consensus 116 ~~~~~~~~~~VLDlG-cG~-G~l~~~la~-~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D 191 (409)
......+|.+||-+| +|. |.++..+++ .|+ +|++++.++-.+.+++ .|... ++..+-.+ +...-..+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRNHAFLKA----LGAEQ---CINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHHHHHHHH----HTCSE---EEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccchHHHHHH----cCCCE---EEeCCCcchhhhhccCCC
Confidence 346678999999997 554 788888888 677 8999974435555544 35432 23222211 111125799
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+-.. + . +.+ ....++|+++|+++.
T Consensus 218 ~v~d~~-g-------~-~~~-~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 218 AVIDLV-G-------G-DVG-IQSIDCLKETGCIVS 243 (321)
T ss_dssp EEEESS-C-------H-HHH-HHHGGGEEEEEEEEE
T ss_pred EEEECC-C-------c-HHH-HHHHHhccCCCEEEE
Confidence 998521 1 1 122 566789999999873
No 367
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.13 E-value=0.15 Score=48.37 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=59.1
Q ss_pred hccCCCCC--CEEEEEcCC--CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 116 QNKFLFKD--KVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 116 ~~~~~~~~--~~VLDlGcG--~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
......++ .+||-.|++ .|..+..+++ .|+.+|++++.++ .++.+++. .|.. . ++..+-.++.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~-~~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD--A-AINYKKDNVAEQLRE 225 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS--E-EEETTTSCHHHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc--e-EEecCchHHHHHHHH
Confidence 33567788 999999983 3566666666 6776999999988 76666542 2332 1 2221111110
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
...+.+|+++... + . ..+....++|+++|+++.
T Consensus 226 ~~~~~~d~vi~~~-G-------~--~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 226 SCPAGVDVYFDNV-G-------G--NISDTVISQMNENSHIIL 258 (357)
T ss_dssp HCTTCEEEEEESC-C-------H--HHHHHHHHTEEEEEEEEE
T ss_pred hcCCCCCEEEECC-C-------H--HHHHHHHHHhccCcEEEE
Confidence 1113799998642 1 1 345566689999999874
No 368
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.06 E-value=0.57 Score=44.89 Aligned_cols=94 Identities=17% Similarity=0.172 Sum_probs=66.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcccccccCCCCceeEEEEeccc
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.+.+||.|+.+.|.++..++.. .++.+.-|- ....++.|+..|++++ .+++... ..+ . ...+|+|+..+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~-~~~~~~v~~~l-- 108 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--Y-PQQPGVVLIKV-- 108 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--C-CSSCSEEEEEC--
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--c-ccCCCEEEEEc--
Confidence 4567999999999999888754 345554355 5567788999999864 3665432 111 2 37899999754
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
......+...+..+...|+||+.++
T Consensus 109 --pk~~~~l~~~L~~l~~~l~~~~~i~ 133 (375)
T 4dcm_A 109 --PKTLALLEQQLRALRKVVTSDTRII 133 (375)
T ss_dssp --CSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred --CCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 2334566777888889999999886
No 369
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.06 E-value=0.63 Score=37.53 Aligned_cols=89 Identities=16% Similarity=0.123 Sum_probs=53.6
Q ss_pred CCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeEEEE
Q 015306 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDIIIS 195 (409)
Q Consensus 123 ~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~DvVvs 195 (409)
..+|+-+|||. | .++..|.+.|. .|+++|.++ .++.+++ .+ +.++.+|..+.. ..-..+|+|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35789988875 3 23334444565 899999999 8776654 22 678888886643 12357999986
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
..- . ......+-...+.+.|+..++
T Consensus 78 ~~~-----~-~~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 78 TIP-----N-GYEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp CCS-----C-HHHHHHHHHHHHHHCSSSEEE
T ss_pred ECC-----C-hHHHHHHHHHHHHHCCCCeEE
Confidence 321 1 111122223345567777655
No 370
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.99 E-value=0.51 Score=48.95 Aligned_cols=107 Identities=20% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHc-----------C--CCEEEEEec---HH-HHHHH-----------HHHHHHcCC----
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA-----------G--AAHVYAVEC---SQ-MANMA-----------KQIVEANGF---- 169 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~-----------g--~~~V~~vD~---s~-~~~~a-----------~~~~~~~~~---- 169 (409)
+.-+|||+|-|+|...+...+. . .-+++++|. +. .+..+ ++.......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4469999999999776655442 1 136999998 54 33322 122222110
Q ss_pred ---------CCcEEEEEccccccc--CC---CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 170 ---------SNVITVLKGKIEEIE--LP---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 170 ---------~~~i~~~~~d~~~~~--~~---~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.-.+++..+|+.+.- +. ...||+++.+.+......+---..++..+.++++|||.+...
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 012456667776542 11 367999998764332222222367889999999999998743
No 371
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.95 E-value=2.5 Score=39.75 Aligned_cols=120 Identities=9% Similarity=0.122 Sum_probs=76.8
Q ss_pred HhHHHHHHHHHhccCCC-CCCEEEEEcCCCChHHHHHHHc--CCCEEEEEecHHHHHHHHHHHHHcC-------------
Q 015306 105 VRTKSYQNVIYQNKFLF-KDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQMANMAKQIVEANG------------- 168 (409)
Q Consensus 105 ~r~~~~~~~l~~~~~~~-~~~~VLDlGcG~G~l~~~la~~--g~~~V~~vD~s~~~~~a~~~~~~~~------------- 168 (409)
.|+..+...+.+..... +...|+-||||.-.....+... ...+++=||.-++++.=++.+...+
T Consensus 72 ~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~ 151 (334)
T 3iei_A 72 ARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSED 151 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhccccccc
Confidence 35555555554433322 4679999999998888887764 2457888888774443333333211
Q ss_pred ---------CCCcEEEEEccccccc----------CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 169 ---------FSNVITVLKGKIEEIE----------LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 169 ---------~~~~i~~~~~d~~~~~----------~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
-+++..++.+|+.+.. +.....-+++++.+..++. +.....+++.+.... |+|.++
T Consensus 152 ~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~-~~~~~~ll~~ia~~f-~~~~~i 226 (334)
T 3iei_A 152 TLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMT-PEQSANLLKWAANSF-ERAMFI 226 (334)
T ss_dssp SCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHC-SSEEEE
T ss_pred ccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCC-HHHHHHHHHHHHHhC-CCceEE
Confidence 1356899999997731 3345677899998766554 456678888887766 455544
No 372
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.86 E-value=0.4 Score=45.22 Aligned_cols=93 Identities=26% Similarity=0.323 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEEcCCC--ChHHHHHHH-c-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-----cCCC
Q 015306 118 KFLFKDKVVLDVGAGT--GILSLFCAK-A-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-----ELPV 187 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~--G~l~~~la~-~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~ 187 (409)
....++.+||-.|+|+ |..+..+++ . |+ +|+++|.++ .++.+++. +.. . ++...-.+. ....
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~----g~~--~-~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GAD--Y-VINASMQDPLAEIRRITE 237 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TCS--E-EEETTTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh----CCC--E-EecCCCccHHHHHHHHhc
Confidence 5577899999999984 566666666 5 77 899999998 87777542 322 1 222111111 1112
Q ss_pred -CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 188 -TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 188 -~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+.+|+|+... + . ...+....++|+++|+++.
T Consensus 238 ~~~~d~vi~~~-g----~----~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 238 SKGVDAVIDLN-N----S----EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp TSCEEEEEESC-C----C----HHHHTTGGGGEEEEEEEEE
T ss_pred CCCceEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 4799998642 1 1 1245556689999999874
No 373
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.77 E-value=0.18 Score=47.45 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=43.2
Q ss_pred CcEEEEEcccccc-c-CCCCceeEEEEecccccccC------------hhHHHHHHHHHHhcccCCeEEEccCC
Q 015306 171 NVITVLKGKIEEI-E-LPVTKVDIIISEWMGYFLLF------------ENMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 171 ~~i~~~~~d~~~~-~-~~~~~~DvVvs~~~~~~l~~------------~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
+...++++|..+. . +++++||+|++++. |.... ...+...+..+.++|+|||.++....
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPP-Y~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPP-FALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCC-CSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCC-CCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 4578999998763 3 55689999999984 43321 12466788888999999999886533
No 374
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.60 E-value=0.37 Score=50.98 Aligned_cols=42 Identities=19% Similarity=0.142 Sum_probs=35.6
Q ss_pred CCEEEEEcCCCChHHHHHHHcC------CCEEEEEecHH-HHHHHHHHH
Q 015306 123 DKVVLDVGAGTGILSLFCAKAG------AAHVYAVECSQ-MANMAKQIV 164 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~g------~~~V~~vD~s~-~~~~a~~~~ 164 (409)
..+||||-||.|.++.-+.++| ..-+.++|+++ +++.-+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3589999999999999988876 56789999999 888777764
No 375
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.52 E-value=0.18 Score=47.16 Aligned_cols=87 Identities=22% Similarity=0.193 Sum_probs=55.9
Q ss_pred CCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCCCCceeEEEEec
Q 015306 123 DKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISEW 197 (409)
Q Consensus 123 ~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~DvVvs~~ 197 (409)
+. ||-.|+ |.|.++..+++ .|+ +|++++.++ -.+.+++. |... .+-..+.... .+..+.+|+|+-.
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~~--vi~~~~~~~~~~~~~~~~d~v~d~- 218 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL----GANR--ILSRDEFAESRPLEKQLWAGAIDT- 218 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH----TCSE--EEEGGGSSCCCSSCCCCEEEEEES-
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCCE--EEecCCHHHHHhhcCCCccEEEEC-
Confidence 45 999997 34788888888 677 999999998 88887653 4321 1111111111 1223579998742
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.+ . ..+....+.|+++|+++.
T Consensus 219 ~g-------~--~~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 219 VG-------D--KVLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp SC-------H--HHHHHHHHTEEEEEEEEE
T ss_pred CC-------c--HHHHHHHHHHhcCCEEEE
Confidence 11 1 145666789999999874
No 376
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=91.40 E-value=0.2 Score=54.06 Aligned_cols=70 Identities=24% Similarity=0.193 Sum_probs=52.4
Q ss_pred CCEEEEEcCCCChHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---------------C
Q 015306 123 DKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---------------L 185 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------------~ 185 (409)
..+++||.||.|.+++-+.++|. ..|.|+|+++ +++.-+.|.. + ..++.+|+.++. +
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p-----~-~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP-----G-STVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT-----T-SEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC-----C-CccccccHHHHhhhccchhhhhhhhhhc
Confidence 35899999999999999999997 6788999999 8877666542 2 456677764431 2
Q ss_pred C-CCceeEEEEecc
Q 015306 186 P-VTKVDIIISEWM 198 (409)
Q Consensus 186 ~-~~~~DvVvs~~~ 198 (409)
+ .+.+|+|+..+.
T Consensus 614 p~~~~vDll~GGpP 627 (1002)
T 3swr_A 614 PQKGDVEMLCGGPP 627 (1002)
T ss_dssp CCTTTCSEEEECCC
T ss_pred ccCCCeeEEEEcCC
Confidence 2 257999998653
No 377
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.38 E-value=0.17 Score=48.12 Aligned_cols=96 Identities=24% Similarity=0.259 Sum_probs=60.4
Q ss_pred HHhccCCCCCCEEEEEcC-C-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGc-G-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
+.......++.+||-+|+ | .|.++..+++ .|+ +|++++.++ .++.+++. |.. .++..+-.++.
T Consensus 159 l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 159 LFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKA 230 (353)
T ss_dssp HTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHH
Confidence 334456788999999953 3 4677777777 677 899999998 88877653 332 12222111110
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+... +. . .+....+.|+++|.++.
T Consensus 231 ~~~~g~Dvvid~~-g~-----~----~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 231 ETGQGVDIILDMI-GA-----A----YFERNIASLAKDGCLSI 263 (353)
T ss_dssp HHSSCEEEEEESC-CG-----G----GHHHHHHTEEEEEEEEE
T ss_pred HhCCCceEEEECC-CH-----H----HHHHHHHHhccCCEEEE
Confidence 1135799998632 11 1 24455688999999874
No 378
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.24 E-value=0.62 Score=45.82 Aligned_cols=92 Identities=21% Similarity=0.188 Sum_probs=59.5
Q ss_pred cCCCCCCEEEEEcC-C-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc-----------
Q 015306 118 KFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE----------- 182 (409)
Q Consensus 118 ~~~~~~~~VLDlGc-G-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~----------- 182 (409)
....+|.+||-+|+ | .|.++..+|+ .|+ +|++++.++ -++.+++. |.. .++...-.+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~ 295 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAM----GAE---AIIDRNAEGYRFWKDENTQD 295 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCC---EEEETTTTTCCSEEETTEEC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhh----CCc---EEEecCcCcccccccccccc
Confidence 45688999999997 3 4788888888 566 889999888 88877653 432 122211111
Q ss_pred ----------cc--CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 183 ----------IE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 183 ----------~~--~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+. .....+|+|+-.. +. ..+....++|+++|.++.
T Consensus 296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~--------G~--~~~~~~~~~l~~~G~iv~ 342 (456)
T 3krt_A 296 PKEWKRFGKRIRELTGGEDIDIVFEHP--------GR--ETFGASVFVTRKGGTITT 342 (456)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEECS--------CH--HHHHHHHHHEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCCcEEEEcC--------Cc--hhHHHHHHHhhCCcEEEE
Confidence 10 1225799998522 11 245556689999999884
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.03 E-value=0.26 Score=46.19 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=37.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHcCCCEEEEEecHH----HHHHHHHHHHHc
Q 015306 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ----MANMAKQIVEAN 167 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G~l~~~la~~g~~~V~~vD~s~----~~~~a~~~~~~~ 167 (409)
..+|..|||..||+|..+..+.+.|. +.+|+|+++ .++.+++++...
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 47889999999999999999999865 999999996 566777776544
No 380
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.95 E-value=1.9 Score=38.62 Aligned_cols=75 Identities=11% Similarity=0.086 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCC--CC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C---
Q 015306 121 FKDKVVLDVGAG--TG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG--~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (409)
..+++||-.|++ .| .++..+++.|+ +|+.++.++ ..+.+.+.....+- .++.++.+|+.+... .
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHH
Confidence 467899999987 44 35666777777 899998887 66666666554432 258999999987531 0
Q ss_pred --CCceeEEEEec
Q 015306 187 --VTKVDIIISEW 197 (409)
Q Consensus 187 --~~~~DvVvs~~ 197 (409)
.+.+|++|.+.
T Consensus 83 ~~~g~id~li~~A 95 (266)
T 3oig_A 83 EQVGVIHGIAHCI 95 (266)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHhCCeeEEEEcc
Confidence 14789999864
No 381
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.85 E-value=0.34 Score=45.96 Aligned_cols=101 Identities=12% Similarity=0.164 Sum_probs=55.7
Q ss_pred HHHhccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc------cccc
Q 015306 113 VIYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG------KIEE 182 (409)
Q Consensus 113 ~l~~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~------d~~~ 182 (409)
++.......+|.+||-+|+ |.|.++..+|+ .|+..|..++.++ ..+. .+.+...|... ++.. ++.+
T Consensus 158 ~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~~~~lGa~~---vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 158 MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKL-SDRLKSLGAEH---VITEEELRRPEMKN 233 (357)
T ss_dssp HHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHH-HHHHHHTTCSE---EEEHHHHHSGGGGG
T ss_pred HHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHH-HHHHHhcCCcE---EEecCcchHHHHHH
Confidence 3334456788999999997 34788888888 6775555665543 2111 12233345432 2221 1111
Q ss_pred ccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 183 IELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 183 ~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+.+|+|+-.. + . . .. ....++|+++|+++.
T Consensus 234 ~~~~~~~~Dvvid~~-g----~-~---~~-~~~~~~l~~~G~iv~ 268 (357)
T 1zsy_A 234 FFKDMPQPRLALNCV-G----G-K---SS-TELLRQLARGGTMVT 268 (357)
T ss_dssp TTSSSCCCSEEEESS-C----H-H---HH-HHHHTTSCTTCEEEE
T ss_pred HHhCCCCceEEEECC-C----c-H---HH-HHHHHhhCCCCEEEE
Confidence 111112599998521 1 1 1 12 234589999999874
No 382
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.83 E-value=0.83 Score=42.98 Aligned_cols=93 Identities=22% Similarity=0.235 Sum_probs=59.5
Q ss_pred HHhccCCCCCCEEEEEcC-C-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----
Q 015306 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGc-G-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (409)
+.......++.+||-+|+ | .|.++..+++ .|+ +|+++ .++ -++.+++. |.. . +. +-.++.
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l----Ga~--~--i~-~~~~~~~~~~~ 210 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL----GAT--P--ID-ASREPEDYAAE 210 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH----TSE--E--EE-TTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc----CCC--E--ec-cCCCHHHHHHH
Confidence 334456788999999994 3 4788888888 577 89999 777 77776553 432 1 22 222211
Q ss_pred -CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 -~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.....+|+|+-.. + . ..+....+.|+++|.++.
T Consensus 211 ~~~~~g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 211 HTAGQGFDLVYDTL-G----G-----PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp HHTTSCEEEEEESS-C----T-----HHHHHHHHHEEEEEEEEE
T ss_pred HhcCCCceEEEECC-C----c-----HHHHHHHHHHhcCCeEEE
Confidence 1235799998532 1 1 234555678999999874
No 383
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.82 E-value=2.2 Score=38.61 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH------------H-HHHHHHHHHHHcCCCCcEEEEEccccccc
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS------------Q-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s------------~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (409)
..+++||-.|++.| .++..+++.|+ +|+.+|.+ . .++.+...+...+ .++.++.+|+.+..
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 46789999998876 34556666777 89999876 5 5555555555444 45899999998753
Q ss_pred C-----C-----CCceeEEEEecccccc---cChhHHH-----------HHHHHHHhcccCCeEEEc
Q 015306 185 L-----P-----VTKVDIIISEWMGYFL---LFENMLN-----------TVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 185 ~-----~-----~~~~DvVvs~~~~~~l---~~~~~~~-----------~~l~~~~~~LkpgG~lip 227 (409)
. . .+++|++|.+.-.... .....+. .+.+.+.+.++.+|.+|.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 1 0 1479999986411110 1112222 344556667777887763
No 384
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.36 E-value=0.22 Score=47.61 Aligned_cols=91 Identities=23% Similarity=0.225 Sum_probs=54.4
Q ss_pred CCCCCEEEEEc-CC-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---CCCCceeE
Q 015306 120 LFKDKVVLDVG-AG-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVDI 192 (409)
Q Consensus 120 ~~~~~~VLDlG-cG-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~Dv 192 (409)
..+|.+||-.| +| .|.++..+++ .|+ +|++++ ++ -.+.+++ .|.. .++..+-.++. .....+|+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRK----LGAD---DVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS---EEEETTSSCHHHHHHTSCCBSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHH----cCCC---EEEECCchHHHHHHhhcCCCCE
Confidence 67899999999 34 4777888887 676 899998 55 6555543 3432 12221111110 11246999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+-.. + . . ...+....+.|+++|+++.
T Consensus 252 vid~~-g----~-~--~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 252 ILDNV-G----G-S--TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp EEESS-C----T-T--HHHHGGGGBCSSSCCEEEE
T ss_pred EEECC-C----C-h--hhhhHHHHHhhcCCcEEEE
Confidence 98532 1 1 1 1123445578999999874
No 385
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.21 E-value=1.3 Score=39.55 Aligned_cols=71 Identities=13% Similarity=0.215 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+ ..++.++.+|+.+... .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999998876 34556666777 899999988 666555443 2458999999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 80 ~g~id~lv~nA 90 (255)
T 4eso_A 80 LGAIDLLHINA 90 (255)
T ss_dssp HSSEEEEEECC
T ss_pred hCCCCEEEECC
Confidence 25799999863
No 386
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=90.00 E-value=0.47 Score=45.05 Aligned_cols=100 Identities=12% Similarity=0.120 Sum_probs=55.3
Q ss_pred HHhccCCCCC-CEEEEEcC-C-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc------cccc
Q 015306 114 IYQNKFLFKD-KVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG------KIEE 182 (409)
Q Consensus 114 l~~~~~~~~~-~~VLDlGc-G-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~------d~~~ 182 (409)
+.......+| .+||-+|+ | .|.++..+|+ .|+ +|+++..++ .+...++.+...|... ++.. ++.+
T Consensus 158 l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 158 LTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQ---VITEDQNNSREFGP 233 (364)
T ss_dssp HHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSE---EEEHHHHHCGGGHH
T ss_pred HHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeE---EEecCccchHHHHH
Confidence 3333456788 99999997 3 4788888888 677 777776443 3111122223345432 2221 1111
Q ss_pred -cc-C---CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 183 -IE-L---PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 183 -~~-~---~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+. . ....+|+|+-.. + . .... ...++|+++|+++.
T Consensus 234 ~i~~~t~~~~~g~Dvvid~~-G-------~-~~~~-~~~~~l~~~G~~v~ 273 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNCV-G-------G-KSST-GIARKLNNNGLMLT 273 (364)
T ss_dssp HHHHHHHHHTCCEEEEEESS-C-------H-HHHH-HHHHTSCTTCEEEE
T ss_pred HHHHHhhccCCCceEEEECC-C-------c-hhHH-HHHHHhccCCEEEE
Confidence 10 0 125799998521 1 1 1223 44589999999874
No 387
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=89.78 E-value=1.6 Score=39.78 Aligned_cols=72 Identities=14% Similarity=0.222 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (409)
..+|+++|--|++.| ..+..+++.|+ +|+.+|.++ .++.+.+.+ + .++..+.+|+.+...
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 368999999999887 45667777788 899999998 666554433 2 347788899877531
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
.-++.|++|.+.
T Consensus 100 ~~G~iDiLVNNA 111 (273)
T 4fgs_A 100 EAGRIDVLFVNA 111 (273)
T ss_dssp HHSCEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 136899999864
No 388
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.68 E-value=3.9 Score=37.29 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCC--C---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---------
Q 015306 121 FKDKVVLDVGAGT--G---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~--G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (409)
..+++||-.|++. | .++..+++.|+ +|+.++.++ ..+.+.+.....+ ++.++.+|+.+...
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHH
Confidence 5788999999873 3 35666777777 799999887 6666666555443 48899999987531
Q ss_pred -CCCceeEEEEec
Q 015306 186 -PVTKVDIIISEW 197 (409)
Q Consensus 186 -~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 105 ~~~g~iD~lVnnA 117 (293)
T 3grk_A 105 KKWGKLDFLVHAI 117 (293)
T ss_dssp HHTSCCSEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 125799999864
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.43 E-value=1.4 Score=40.92 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=57.1
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCC-EEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccc-ccCCCCceeEEEEecc
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAA-HVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IELPVTKVDIIISEWM 198 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~-~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~DvVvs~~~ 198 (409)
.+|.-||+|. |.++..+++.|.. +|+++|.++ .++.+.+ .|..+ -...+..+ .. ...|+|+....
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~---~~~~~~~~~~~---~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID---EGTTSIAKVED---FSPDFVMLSSP 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS---EEESCTTGGGG---GCCSEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc---hhcCCHHHHhh---ccCCEEEEeCC
Confidence 6899999885 3556666667753 899999999 7766543 34321 12233333 21 56899996432
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
......++..+...|++|.+++
T Consensus 104 ------~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 104 ------VRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp ------GGGHHHHHHHHHHHSCTTCEEE
T ss_pred ------HHHHHHHHHHHhhccCCCcEEE
Confidence 2345677788888899988766
No 390
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.29 E-value=0.35 Score=45.30 Aligned_cols=57 Identities=18% Similarity=0.163 Sum_probs=41.1
Q ss_pred CcEEEE-Eccccccc--CCCCceeEEEEeccccccc---------ChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 171 NVITVL-KGKIEEIE--LPVTKVDIIISEWMGYFLL---------FENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 171 ~~i~~~-~~d~~~~~--~~~~~~DvVvs~~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
....++ ++|..+.. +++++||+|++++. |... ....+...+..+.++|+|||.++..
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPP-Y~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPP-YNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCC-SBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCC-CCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 446788 99997642 55679999999984 4332 1124567777889999999998854
No 391
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.27 E-value=0.42 Score=45.26 Aligned_cols=94 Identities=21% Similarity=0.146 Sum_probs=57.7
Q ss_pred hccCCCCCCEEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc----c--C
Q 015306 116 QNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E--L 185 (409)
Q Consensus 116 ~~~~~~~~~~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~--~ 185 (409)
......++.+||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++. |.. . ++..+-.++ . .
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----g~~--~-~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL----GAA--A-GFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS--E-EEETTTSCHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCc--E-EEecCChHHHHHHHHHh
Confidence 3356778999999984 34666666666 666 899999998 77777442 322 1 222111111 0 1
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
....+|+|+... +. . .+....+.|+++|+++.
T Consensus 228 ~~~~~d~vi~~~-G~-----~----~~~~~~~~l~~~G~iv~ 259 (354)
T 2j8z_A 228 KGAGVNLILDCI-GG-----S----YWEKNVNCLALDGRWVL 259 (354)
T ss_dssp TTSCEEEEEESS-CG-----G----GHHHHHHHEEEEEEEEE
T ss_pred cCCCceEEEECC-Cc-----h----HHHHHHHhccCCCEEEE
Confidence 224799998643 11 1 23445588999999874
No 392
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=89.23 E-value=1.7 Score=41.71 Aligned_cols=70 Identities=14% Similarity=0.237 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHc--------CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeE
Q 015306 122 KDKVVLDVGAGTGILSLFCAKA--------GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~--------g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~Dv 192 (409)
..-.|+|+|+|+|.++..+.+. ...+++.||+|+ ..+.-++.+... ++|.+.. ++.+++ ...=+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~~-~l~~lp---~~~~~ 152 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWHD-SFEDVP---EGPAV 152 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEES-SGGGSC---CSSEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEeC-ChhhcC---CCCeE
Confidence 3457999999999998877652 133899999999 777666555432 2577653 344443 22457
Q ss_pred EEEecc
Q 015306 193 IISEWM 198 (409)
Q Consensus 193 Vvs~~~ 198 (409)
|+++-+
T Consensus 153 viANE~ 158 (387)
T 1zkd_A 153 ILANEY 158 (387)
T ss_dssp EEEESS
T ss_pred EEeccc
Confidence 787644
No 393
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.19 E-value=2.6 Score=38.42 Aligned_cols=104 Identities=25% Similarity=0.312 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH--HHHHHHHHHHHcCCCCcEEEEEcccccccC----------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ--MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~--~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.+. ..+.+.+.....+ .++.++.+|+.+...
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999998876 34556666776 899988765 4444455454443 458999999987531
Q ss_pred CCCceeEEEEeccccc----cc--ChhHH-----------HHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYF----LL--FENML-----------NTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~----l~--~~~~~-----------~~~l~~~~~~LkpgG~lip 227 (409)
..+.+|++|.+.-... +. ....+ -.+.+.+.+.++.+|.+|.
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 0247999998631110 10 11112 2345566677778887763
No 394
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.16 E-value=1.4 Score=41.05 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+...+...++.++.+|+.+... .
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46789999998877 34556666777 899999998 777766666655543469999999987530 1
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+.+|++|.+.
T Consensus 85 ~g~id~lv~nA 95 (319)
T 3ioy_A 85 FGPVSILCNNA 95 (319)
T ss_dssp TCCEEEEEECC
T ss_pred CCCCCEEEECC
Confidence 25789999864
No 395
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.98 E-value=1.1 Score=41.85 Aligned_cols=101 Identities=19% Similarity=0.187 Sum_probs=66.6
Q ss_pred CCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-------C-CC---------CcEEEEEccccc
Q 015306 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-------G-FS---------NVITVLKGKIEE 182 (409)
Q Consensus 123 ~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~-------~-~~---------~~i~~~~~d~~~ 182 (409)
..+|.-||+|+ | .++..+|..|. .|+.+|+++ .++.+.+++... + +. .++++. .|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchHh
Confidence 45899999997 2 56777778877 899999999 888776665432 1 11 123322 22222
Q ss_pred ccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCce
Q 015306 183 IELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASL 232 (409)
Q Consensus 183 ~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (409)
. -..+|+|+=. .......-..++..+.++++|+.++.-++-++
T Consensus 84 a---~~~ad~ViEa----v~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 84 A---VEGVVHIQEC----VPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp H---TTTEEEEEEC----CCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred H---hccCcEEeec----cccHHHHHHHHHHHHHHHhhhcceeehhhhhc
Confidence 1 2568988732 24445666789999999999998887555443
No 396
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.85 E-value=0.47 Score=45.02 Aligned_cols=93 Identities=22% Similarity=0.156 Sum_probs=57.0
Q ss_pred cCCC-CCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEE-ccccccc-CCCCcee
Q 015306 118 KFLF-KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLK-GKIEEIE-LPVTKVD 191 (409)
Q Consensus 118 ~~~~-~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~-~d~~~~~-~~~~~~D 191 (409)
.... +|.+||-+|+|. |.++..+++ .|+ +|++++.++ ..+.+++ ..|... ++. .+...+. .. +.+|
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~~-~g~D 246 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSELA-DSLD 246 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHST-TTEE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHhc-CCCC
Confidence 3456 899999999864 677777777 677 899999998 7766652 234322 222 1211111 22 4799
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+-.. + .... +....++|+++|+++.
T Consensus 247 ~vid~~-g----~~~~----~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 247 YVIDTV-P----VHHA----LEPYLSLLKLDGKLIL 273 (357)
T ss_dssp EEEECC-C----SCCC----SHHHHTTEEEEEEEEE
T ss_pred EEEECC-C----ChHH----HHHHHHHhccCCEEEE
Confidence 998532 1 1111 2334578999999874
No 397
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.78 E-value=1.2 Score=39.87 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C----C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----V 187 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----~ 187 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... . .
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 46789999998887 35566666777 899999988 7766666666554 469999999977531 0 1
Q ss_pred CceeEEEEec
Q 015306 188 TKVDIIISEW 197 (409)
Q Consensus 188 ~~~DvVvs~~ 197 (409)
+++|++|.+.
T Consensus 82 g~id~lv~nA 91 (252)
T 3h7a_A 82 APLEVTIFNV 91 (252)
T ss_dssp SCEEEEEECC
T ss_pred CCceEEEECC
Confidence 5799999864
No 398
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.61 E-value=0.46 Score=45.26 Aligned_cols=93 Identities=23% Similarity=0.161 Sum_probs=55.4
Q ss_pred CCC-CCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ccccccCCCCceeEE
Q 015306 119 FLF-KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELPVTKVDII 193 (409)
Q Consensus 119 ~~~-~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~DvV 193 (409)
... ++.+||-+|+|. |.++..+++ .|+ +|++++.++ .++.+++. .|.. .++.. +...+..-.+.+|+|
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~---lGa~---~v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKN---FGAD---SFLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHT---SCCS---EEEETTCHHHHHHTTTCEEEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cCCc---eEEeccCHHHHHHhhCCCCEE
Confidence 455 899999999864 666777777 576 899999988 66665422 3432 12221 111111011479999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+... +. ... +....+.|+++|+++.
T Consensus 256 id~~-g~----~~~----~~~~~~~l~~~G~iv~ 280 (366)
T 1yqd_A 256 IDTV-SA----VHP----LLPLFGLLKSHGKLIL 280 (366)
T ss_dssp EECC-SS----CCC----SHHHHHHEEEEEEEEE
T ss_pred EECC-Cc----HHH----HHHHHHHHhcCCEEEE
Confidence 8632 11 111 2334477899999874
No 399
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=88.52 E-value=0.54 Score=44.51 Aligned_cols=91 Identities=15% Similarity=0.310 Sum_probs=55.7
Q ss_pred CCCCC------CEEEEEcCCC-ChHH-HHHH-H-cCCCEEEEEecHH----HHHHHHHHHHHcCCCCcEEEEEc---ccc
Q 015306 119 FLFKD------KVVLDVGAGT-GILS-LFCA-K-AGAAHVYAVECSQ----MANMAKQIVEANGFSNVITVLKG---KIE 181 (409)
Q Consensus 119 ~~~~~------~~VLDlGcG~-G~l~-~~la-~-~g~~~V~~vD~s~----~~~~a~~~~~~~~~~~~i~~~~~---d~~ 181 (409)
...++ .+||-+|+|. |.++ ..+| + .|+.+|++++.++ -++.++ ..|. +.+.. ++.
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa----~~v~~~~~~~~ 234 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDA----TYVDSRQTPVE 234 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTC----EEEETTTSCGG
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCC----cccCCCccCHH
Confidence 45677 9999999864 6777 8888 6 6776699999865 244443 3443 22221 111
Q ss_pred cc-cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 182 EI-ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 182 ~~-~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
++ ... +.+|+|+-.. + . ...+....++|+++|+++.
T Consensus 235 ~i~~~~-gg~Dvvid~~-g----~----~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 235 DVPDVY-EQMDFIYEAT-G----F----PKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp GHHHHS-CCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhC-CCCCEEEECC-C----C----hHHHHHHHHHHhcCCEEEE
Confidence 11 012 3799998521 1 1 1234556688999999874
No 400
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.26 E-value=0.26 Score=47.00 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 122 KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 122 ~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
++++||-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++.... .+..+..+..++.-.-..+|+|+....
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence 458999999964 344444444 677 999999998 77777655432 122332222222100136899986421
Q ss_pred cccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.... ..+.-+.....+.++|||+++-
T Consensus 240 ~~~~---~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 240 VPGR---RAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp CTTS---SCCCCBCHHHHTTSCTTCEEEE
T ss_pred cCCC---CCCeecCHHHHhhCCCCCEEEE
Confidence 1000 0000012233467899998873
No 401
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.23 E-value=2.9 Score=37.67 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH-H-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS-Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.. . ..+.+.+.+...+ .++.++.+|+.+...
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 57889999998876 35566667777 78877553 3 5555555555444 458899999977531
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 106 ~~g~iD~lvnnA 117 (271)
T 3v2g_A 106 ALGGLDILVNSA 117 (271)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCcEEEECC
Confidence 024799999864
No 402
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.14 E-value=3 Score=37.24 Aligned_cols=75 Identities=12% Similarity=0.124 Sum_probs=52.2
Q ss_pred CCCCCCEEEEEcCC--CC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-------
Q 015306 119 FLFKDKVVLDVGAG--TG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL------- 185 (409)
Q Consensus 119 ~~~~~~~VLDlGcG--~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------- 185 (409)
...++++||-.|++ .| .++..+++.|+ +|+.++.++ ..+.+++.....+ .+.++.+|+.+...
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHH
Confidence 34678899999986 44 34555666677 899998877 6666666555543 37889999977531
Q ss_pred ---CCCceeEEEEec
Q 015306 186 ---PVTKVDIIISEW 197 (409)
Q Consensus 186 ---~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 86 ~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSI 100 (271)
T ss_dssp HHHHCSCEEEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 125799999864
No 403
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.03 E-value=0.91 Score=40.97 Aligned_cols=74 Identities=19% Similarity=0.157 Sum_probs=56.6
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----------CC
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----------LP 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~ 186 (409)
..|+++|--|++.| ..+..+++.|+ +|+.+|.++ .++.+.+.+...+ .++.++.+|+.+.. -.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 57899999998887 45667777887 899999998 7776666666665 34888999987743 12
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
-++.|++|.+.
T Consensus 84 ~G~iDiLVNNA 94 (255)
T 4g81_D 84 GIHVDILINNA 94 (255)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCcEEEECC
Confidence 37899999874
No 404
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.89 E-value=2.5 Score=38.66 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCC--Ch---HHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C---
Q 015306 121 FKDKVVLDVGAGT--GI---LSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~--G~---l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (409)
..+++||-.|++. |+ ++..+++.|+ +|+.++.++ ..+.+.+.....+ .+.++.+|+.+... .
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHH
Confidence 4578999999864 42 5666777777 799999887 6666665555443 26788999877531 0
Q ss_pred --CCceeEEEEec
Q 015306 187 --VTKVDIIISEW 197 (409)
Q Consensus 187 --~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 104 ~~~g~iD~lVnnA 116 (296)
T 3k31_A 104 EEWGSLDFVVHAV 116 (296)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 15799999864
No 405
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.82 E-value=1.8 Score=38.90 Aligned_cols=74 Identities=26% Similarity=0.330 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCCCh---HHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTGI---LSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~---l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
.+|+++|--|++.|+ .+..+++.|+ +|+.+|.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999998883 5666777777 899999999 8777777777665 458899999977531 1
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
-++.|++|.+.
T Consensus 82 ~G~iDiLVNNA 92 (254)
T 4fn4_A 82 YSRIDVLCNNA 92 (254)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 26899999874
No 406
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.76 E-value=0.31 Score=45.53 Aligned_cols=94 Identities=21% Similarity=0.132 Sum_probs=55.8
Q ss_pred CCCCCC-EEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cCCCCceeE
Q 015306 119 FLFKDK-VVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDI 192 (409)
Q Consensus 119 ~~~~~~-~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~Dv 192 (409)
...++. +||-+|+ |.|.++..+++ .|+ +|++++.++ -++.+++ .|....+.....+.... ....+.+|+
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~d~ 219 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLDKQRWAA 219 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCSEEEECC---------CCSCCEEE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCcEEEecCCcHHHHHHHhcCCcccE
Confidence 456665 8999997 44778888888 676 799999988 7777754 34322111111110001 122357999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+-.. + . . .+....+.|+++|+++.
T Consensus 220 vid~~-g----~-~----~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 220 AVDPV-G----G-R----TLATVLSRMRYGGAVAV 244 (328)
T ss_dssp EEECS-T----T-T----THHHHHHTEEEEEEEEE
T ss_pred EEECC-c----H-H----HHHHHHHhhccCCEEEE
Confidence 98532 1 1 1 23455688999999874
No 407
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.71 E-value=3.5 Score=37.59 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH--H-HHHHHHHHHHHcCCCCcEEEEEcccccccC---------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS--Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s--~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.+ . ..+.+.+.....+ .++.++.+|+.+...
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 46789999998776 34556666777 88888876 3 4555555555544 458899999977531
Q ss_pred -CCCceeEEEEeccccc-cc-----ChhHH-----------HHHHHHHHhcccCCeEEEc
Q 015306 186 -PVTKVDIIISEWMGYF-LL-----FENML-----------NTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 -~~~~~DvVvs~~~~~~-l~-----~~~~~-----------~~~l~~~~~~LkpgG~lip 227 (409)
..+.+|++|.+.-... .. ....+ -.+.+.+.+.++++|.||.
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 0257999998641111 00 11111 2344556677777887763
No 408
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=87.48 E-value=1.6 Score=48.61 Aligned_cols=71 Identities=24% Similarity=0.199 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---------------
Q 015306 122 KDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--------------- 184 (409)
Q Consensus 122 ~~~~VLDlGcG~G~l~~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------------- 184 (409)
...+++||.||.|.+++-+.++|. ..|.++|+++ +++.-+.+.. + ..++.+|+.++.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p-----~-~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP-----G-TTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT-----T-SEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC-----C-CcEeeccHHHHhHhhhccchhhhhhhh
Confidence 346899999999999999999986 5789999999 8877666542 2 346666654321
Q ss_pred CC-CCceeEEEEecc
Q 015306 185 LP-VTKVDIIISEWM 198 (409)
Q Consensus 185 ~~-~~~~DvVvs~~~ 198 (409)
++ .+.+|+|+..+.
T Consensus 924 lp~~~~vDvl~GGpP 938 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPP 938 (1330)
T ss_dssp CCCTTTCSEEEECCC
T ss_pred ccccCccceEEecCC
Confidence 12 247999998653
No 409
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.28 E-value=3.6 Score=40.42 Aligned_cols=96 Identities=20% Similarity=0.250 Sum_probs=60.2
Q ss_pred CEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-------C------C-CCcEEEEEcccccccCC
Q 015306 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-------G------F-SNVITVLKGKIEEIELP 186 (409)
Q Consensus 124 ~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~-------~------~-~~~i~~~~~d~~~~~~~ 186 (409)
.+|.-||+|. | .++..+++.|. .|+.+|.++ .++.+++.+..+ + . .....+ ..|...+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 5799999997 3 45666666776 899999999 887776543210 1 0 011222 4444221
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccC
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (409)
..+|+||.... ........++..+...++|+.+++-++
T Consensus 113 -~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 113 -STVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -TTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 56899996431 222234567778888899998877433
No 410
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=87.14 E-value=2.3 Score=38.20 Aligned_cols=104 Identities=20% Similarity=0.214 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH-H-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS-Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.. . .++...+.+...+ .++.++.+|+.+...
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56789999998876 34556666777 78877653 4 5555555555544 458999999987531
Q ss_pred CCCceeEEEEeccccccc-----ChhHH-----------HHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLL-----FENML-----------NTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~-----~~~~~-----------~~~l~~~~~~LkpgG~lip 227 (409)
..++.|++|.+.-..... ....+ -.+.+.+.+.++++|.+|.
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 024789999763111100 11111 1344556677777887763
No 411
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.12 E-value=4.7 Score=37.51 Aligned_cols=96 Identities=18% Similarity=0.121 Sum_probs=61.8
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHH-------HcCCC----------CcEEEEEcccccc
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVE-------ANGFS----------NVITVLKGKIEEI 183 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~-------~~~~~----------~~i~~~~~d~~~~ 183 (409)
++|--||+|. +.++..+++.|. +|+++|.++ .++.+.+.+. ..|+- .++++. .|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 5788999986 356677777877 899999999 8887765432 22321 124432 233322
Q ss_pred cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 184 ~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
-...|+|+... .........++..+...++|+.+++-.
T Consensus 85 ---v~~aDlVieav----pe~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 85 ---VEGVVHIQECV----PENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp ---TTTEEEEEECC----CSCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred ---HhcCCEEEEec----cCCHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 15799998643 222234457778888889998877633
No 412
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.10 E-value=1.8 Score=38.76 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEE-ecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAV-ECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P---- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~v-D~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.+ +.++ ..+.+.+.+...+ .++.++.+|+.+... .
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999998887 35566667777 77777 6555 5555555555443 458899999987531 0
Q ss_pred -CCceeEEEEec
Q 015306 187 -VTKVDIIISEW 197 (409)
Q Consensus 187 -~~~~DvVvs~~ 197 (409)
.++.|++|.+.
T Consensus 83 ~~g~id~lv~nA 94 (259)
T 3edm_A 83 KFGEIHGLVHVA 94 (259)
T ss_dssp HHCSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 14799999864
No 413
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.07 E-value=4.8 Score=36.12 Aligned_cols=80 Identities=11% Similarity=-0.014 Sum_probs=53.5
Q ss_pred CEEEEEcCCCChHHHHHHH----cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecc
Q 015306 124 KVVLDVGAGTGILSLFCAK----AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (409)
Q Consensus 124 ~~VLDlGcG~G~l~~~la~----~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~ 198 (409)
++||-.|+ |.++..+++ .|. +|++++-++ ....... ..++++.+|+.++. ...+|+||...-
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCC
Confidence 58999994 888777766 354 899999887 5443322 24899999999876 478999998532
Q ss_pred cccccChhHHHHHHHHHHh
Q 015306 199 GYFLLFENMLNTVLYARDK 217 (409)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~ 217 (409)
...........+++++.+
T Consensus 73 -~~~~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 73 -PDSGGDPVLAALGDQIAA 90 (286)
T ss_dssp -CBTTBCHHHHHHHHHHHH
T ss_pred -ccccccHHHHHHHHHHHh
Confidence 111222334556666654
No 414
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.93 E-value=0.36 Score=45.11 Aligned_cols=91 Identities=24% Similarity=0.219 Sum_probs=57.0
Q ss_pred CCCCCC-EEEEEcC--CCChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-cc-cc-c-cCCCCc
Q 015306 119 FLFKDK-VVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KI-EE-I-ELPVTK 189 (409)
Q Consensus 119 ~~~~~~-~VLDlGc--G~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~-~~-~-~~~~~~ 189 (409)
...++. +||-+|+ |.|.++..+++ .|+ +|++++.++ .++.+++. |... ++.. +. .+ . ....+.
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l----Ga~~---v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL----GASE---VISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH----TCSE---EEEHHHHCSSCCCSSCCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCcE---EEECCCchHHHHHHhhcCC
Confidence 456665 8999997 34777777777 677 799999988 77777652 4321 2221 11 01 1 122357
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+|+-.. + . ..+....+.|+++|+++.
T Consensus 218 ~d~vid~~-g----~-----~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 218 WQGAVDPV-G----G-----KQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp EEEEEESC-C----T-----HHHHHHHTTEEEEEEEEE
T ss_pred ccEEEECC-c----H-----HHHHHHHHhhcCCCEEEE
Confidence 99998532 1 1 134556689999999874
No 415
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.92 E-value=2.5 Score=33.66 Aligned_cols=65 Identities=18% Similarity=0.233 Sum_probs=43.0
Q ss_pred CCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeEEEE
Q 015306 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDIIIS 195 (409)
Q Consensus 123 ~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~DvVvs 195 (409)
.++|+-+|||. | .++..+.+.|. +|+++|.++ .++.+++ .+ +.++.+|..+.. .....+|+|+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 35789999864 2 23334444566 899999999 7766553 22 577888887643 22357999987
Q ss_pred e
Q 015306 196 E 196 (409)
Q Consensus 196 ~ 196 (409)
.
T Consensus 77 ~ 77 (141)
T 3llv_A 77 T 77 (141)
T ss_dssp C
T ss_pred e
Confidence 4
No 416
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.90 E-value=2.2 Score=35.86 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCC-C-hHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----C-CCCceeE
Q 015306 122 KDKVVLDVGAGT-G-ILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----L-PVTKVDI 192 (409)
Q Consensus 122 ~~~~VLDlGcG~-G-~l~~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~~Dv 192 (409)
.+.+|+-+|+|. | .++..+.+. |. .|+++|.++ .++.+++ .+ +.++.+|..+.. . .-..+|+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 356899998864 3 223344445 65 899999999 7665543 23 456677765422 2 2357999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
|+.... .......++. ..+.+.|++.++
T Consensus 109 vi~~~~-----~~~~~~~~~~-~~~~~~~~~~ii 136 (183)
T 3c85_A 109 VLLAMP-----HHQGNQTALE-QLQRRNYKGQIA 136 (183)
T ss_dssp EEECCS-----SHHHHHHHHH-HHHHTTCCSEEE
T ss_pred EEEeCC-----ChHHHHHHHH-HHHHHCCCCEEE
Confidence 987321 1122222223 334556666665
No 417
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.59 E-value=0.59 Score=42.23 Aligned_cols=55 Identities=11% Similarity=-0.063 Sum_probs=38.5
Q ss_pred EEEEEccccccc--CCCCceeEEEEeccccccc-C-----------hhHHHHHHHHHHhcccCCeEEEcc
Q 015306 173 ITVLKGKIEEIE--LPVTKVDIIISEWMGYFLL-F-----------ENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 173 i~~~~~d~~~~~--~~~~~~DvVvs~~~~~~l~-~-----------~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
.+++++|..+.- +++++||+|+++|+ |... . ...+...+..+.++|+|||.++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPP-Y~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPP-YNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCC-CSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCC-CCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 457888886542 45579999999984 4332 1 024567778889999999998753
No 418
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.46 E-value=0.87 Score=41.81 Aligned_cols=86 Identities=14% Similarity=0.164 Sum_probs=49.6
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc
Q 015306 108 KSYQNVIYQNKFLFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (409)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (409)
.-+...|........+++||-+|+| | ..+..+++.|+.+|+.++-++ .++...+.+......-.+... +..++
T Consensus 112 ~G~~~~l~~~~~~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~--~~~~l 188 (283)
T 3jyo_A 112 SGFGRGMEEGLPNAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGV--DARGI 188 (283)
T ss_dssp HHHHHHHHHHCTTCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE--CSTTH
T ss_pred HHHHHHHHHhCcCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEc--CHHHH
Confidence 3556666554445678999999997 3 233445567888999999987 555444444332211113322 22222
Q ss_pred cCCCCceeEEEEe
Q 015306 184 ELPVTKVDIIISE 196 (409)
Q Consensus 184 ~~~~~~~DvVvs~ 196 (409)
.-.-..+|+||..
T Consensus 189 ~~~l~~~DiVIna 201 (283)
T 3jyo_A 189 EDVIAAADGVVNA 201 (283)
T ss_dssp HHHHHHSSEEEEC
T ss_pred HHHHhcCCEEEEC
Confidence 1111469999974
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=86.29 E-value=1.8 Score=38.61 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCCC---hHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 122 KDKVVLDVGAGTG---ILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 122 ~~~~VLDlGcG~G---~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
.+++||-.|++.| .++..+++ .|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4678888886554 23444555 566 899999887 6665555555543 358899999877531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+.+|+||.+.
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 13799999863
No 420
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.20 E-value=2.4 Score=37.38 Aligned_cols=73 Identities=27% Similarity=0.283 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------CC
Q 015306 122 KDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------PV 187 (409)
Q Consensus 122 ~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~~ 187 (409)
.+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5778999997766 34556666776 899999998 7777666666654 358999999977531 13
Q ss_pred CceeEEEEec
Q 015306 188 TKVDIIISEW 197 (409)
Q Consensus 188 ~~~DvVvs~~ 197 (409)
+++|++|.+.
T Consensus 81 ~~id~li~~A 90 (247)
T 3lyl_A 81 LAIDILVNNA 90 (247)
T ss_dssp CCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5799999864
No 421
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.15 E-value=0.3 Score=46.92 Aligned_cols=98 Identities=17% Similarity=0.096 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
.++++|+-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++.. +.. +.....+..++.-.-..+|+|+...
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~---g~~--~~~~~~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEF---CGR--IHTRYSSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TTS--SEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhc---CCe--eEeccCCHHHHHHHHcCCCEEEECC
Confidence 4678999999864 333333333 577 899999998 776665432 221 2222112212110014689999732
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
......... -+.....+.+||||+++-
T Consensus 240 ~~p~~~t~~---li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 240 LVPGAKAPK---LVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp CCTTSCCCC---CBCHHHHTTSCTTCEEEE
T ss_pred CcCCCCCcc---eecHHHHhcCCCCcEEEE
Confidence 100000000 112334477899998873
No 422
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=86.01 E-value=1.8 Score=42.08 Aligned_cols=69 Identities=23% Similarity=0.402 Sum_probs=47.6
Q ss_pred CCEEEEEcCCCChHHHHHHHc----C--CCEEEEEecHH-HHHHHHHHHHHc--CCCCcEEEEEcccccccCCCCcee-E
Q 015306 123 DKVVLDVGAGTGILSLFCAKA----G--AAHVYAVECSQ-MANMAKQIVEAN--GFSNVITVLKGKIEEIELPVTKVD-I 192 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la~~----g--~~~V~~vD~s~-~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~~~~~~D-v 192 (409)
...|+|+|+|+|.++.-+.+. + ..+++.||+|+ +.+.-++.+... .+..+|.+.. + +| +.+. +
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~----~--lP-~~~~g~ 210 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD----A--LP-ERFEGV 210 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES----S--CC-SCEEEE
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc----c--CC-ccCceE
Confidence 469999999999988777652 2 34899999999 888877777642 1334577753 1 33 3344 7
Q ss_pred EEEecc
Q 015306 193 IISEWM 198 (409)
Q Consensus 193 Vvs~~~ 198 (409)
|+++-+
T Consensus 211 iiANE~ 216 (432)
T 4f3n_A 211 VVGNEV 216 (432)
T ss_dssp EEEESC
T ss_pred EEeehh
Confidence 777543
No 423
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.95 E-value=1.8 Score=38.92 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC------CCCce
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL------PVTKV 190 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~ 190 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+....+.++.+|+.+... .-+++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 46789999998776 34555666776 899999988 666655555554433558888999876431 12579
Q ss_pred eEEEEec
Q 015306 191 DIIISEW 197 (409)
Q Consensus 191 DvVvs~~ 197 (409)
|++|.+.
T Consensus 87 d~lv~nA 93 (267)
T 3t4x_A 87 DILINNL 93 (267)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999863
No 424
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=85.88 E-value=2.6 Score=38.47 Aligned_cols=76 Identities=20% Similarity=0.203 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCCCh---HHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------
Q 015306 122 KDKVVLDVGAGTGI---LSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 122 ~~~~VLDlGcG~G~---l~~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (409)
.+++||-.|++.|+ ++..+++.|+ .+|+.++.++ .++.+.+.+....-..++.++.+|+.+...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 57899999988762 3444555554 4899999988 776666655543323468999999987541
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 112 ~~g~iD~lVnnA 123 (287)
T 3rku_A 112 EFKDIDILVNNA 123 (287)
T ss_dssp GGCSCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 124799999864
No 425
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.78 E-value=2.3 Score=42.18 Aligned_cols=86 Identities=29% Similarity=0.316 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe
Q 015306 120 LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 120 ~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
..+|++|+-+|+|. |.....+++ .|+ +|+++|.++ .+..|++ .|. ++ .++.+. + ..+|+|+..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~-l--~~aDvVi~a 336 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMM----EGF----DV--VTVEEA-I--GDADIVVTA 336 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC----EE--CCHHHH-G--GGCSEEEEC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC----EE--ecHHHH-H--hCCCEEEEC
Confidence 57899999999875 433333444 576 999999998 6665543 343 22 233333 1 578999974
Q ss_pred cccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
. + ....+. ....+.+|+||+++-
T Consensus 337 t-g----t~~~i~---~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 337 T-G----NKDIIM---LEHIKAMKDHAILGN 359 (494)
T ss_dssp S-S----SSCSBC---HHHHHHSCTTCEEEE
T ss_pred C-C----CHHHHH---HHHHHhcCCCcEEEE
Confidence 2 1 111111 133466899999873
No 426
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.48 E-value=0.58 Score=44.71 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCC-ChHHHHHH-HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEec
Q 015306 121 FKDKVVLDVGAGT-GILSLFCA-KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (409)
Q Consensus 121 ~~~~~VLDlGcG~-G~l~~~la-~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~ 197 (409)
.++++|+-+|+|. |..+..++ ..|+ +|+++|.++ .++.+.+.. +. .+.....+..++.-.-..+|+|+...
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECC
Confidence 4568999999853 32222223 3577 999999998 766654432 22 23332222222211014689998743
Q ss_pred ccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
... ......-+.+...+.+++||.++-
T Consensus 238 g~~---~~~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 238 LVP---GAKAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp C----------CCSCHHHHTTSCTTCEEEE
T ss_pred CCC---ccccchhHHHHHHHhhcCCCEEEE
Confidence 110 000001113445577899998874
No 427
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=85.46 E-value=5.3 Score=36.43 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=48.3
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC
Q 015306 109 SYQNVIYQNKFLFKDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (409)
Q Consensus 109 ~~~~~l~~~~~~~~~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (409)
-+.+.|........+++||-+|+|. | ..+..+++.|+.+|+.++-++ ..+...+.+...+ .+... +..++.
T Consensus 112 G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~--~~~~l~- 185 (281)
T 3o8q_A 112 GLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQ--AFEQLK- 185 (281)
T ss_dssp HHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEE--EGGGCC-
T ss_pred HHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEe--eHHHhc-
Confidence 4555665433345789999999872 1 223344456877999999987 5544444443322 24444 333332
Q ss_pred CCCceeEEEEe
Q 015306 186 PVTKVDIIISE 196 (409)
Q Consensus 186 ~~~~~DvVvs~ 196 (409)
..+|+||..
T Consensus 186 --~~aDiIIna 194 (281)
T 3o8q_A 186 --QSYDVIINS 194 (281)
T ss_dssp --SCEEEEEEC
T ss_pred --CCCCEEEEc
Confidence 679999974
No 428
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.92 E-value=2 Score=40.65 Aligned_cols=85 Identities=21% Similarity=0.228 Sum_probs=50.8
Q ss_pred CCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecH----HHHHHHHHHHHHcCCCCcEEEEEccccccc--C--CCCceeE
Q 015306 123 DKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECS----QMANMAKQIVEANGFSNVITVLKGKIEEIE--L--PVTKVDI 192 (409)
Q Consensus 123 ~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s----~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~--~~~~~Dv 192 (409)
+.+||-+|+|. |.++..+++ .|+ +|++++.+ +.++.+++ .|. +.+..+ ++. . ..+.+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~----~ga----~~v~~~--~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEE----TKT----NYYNSS--NGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHH----HTC----EEEECT--TCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHH----hCC----ceechH--HHHHHHHHhCCCCCE
Confidence 99999999843 556666666 677 99999986 32344433 232 222111 111 0 0146999
Q ss_pred EEEecccccccChhHHHHHH-HHHHhcccCCeEEEc
Q 015306 193 IISEWMGYFLLFENMLNTVL-YARDKWLVDDGIVLP 227 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l-~~~~~~LkpgG~lip 227 (409)
|+... + .. ..+ +...+.|+++|.++.
T Consensus 250 vid~~-g----~~----~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 250 IIDAT-G----AD----VNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp EEECC-C----CC----THHHHHHGGGEEEEEEEEE
T ss_pred EEECC-C----Ch----HHHHHHHHHHHhcCCEEEE
Confidence 98642 1 11 123 566789999999874
No 429
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=84.89 E-value=3.4 Score=37.16 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=49.1
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEe-cHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVE-CSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD-~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (409)
..+++||-.|++.| .++..+++.|+ +|+.++ .++ ..+...+.+...+ .++.++.+|+.+...
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999998887 35566677787 677664 344 5555555555544 458899999987531
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 102 ~~g~iD~lvnnA 113 (267)
T 3u5t_A 102 AFGGVDVLVNNA 113 (267)
T ss_dssp HHSCEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 025799999864
No 430
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.81 E-value=0.39 Score=45.40 Aligned_cols=95 Identities=14% Similarity=0.114 Sum_probs=55.3
Q ss_pred HHhccCCCCCCEEEEEcCC--CChHHHHHHH-cCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEccccccc-----C
Q 015306 114 IYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE-----L 185 (409)
Q Consensus 114 l~~~~~~~~~~~VLDlGcG--~G~l~~~la~-~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~ 185 (409)
+.......+|.+||-.|++ .|.++..+++ .|..+|++++.++-.+.++ .|.. .++. +-.++. .
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-----~ga~---~~~~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK-----DSVT---HLFD-RNADYVQEVKRI 204 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHG-----GGSS---EEEE-TTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-----cCCc---EEEc-CCccHHHHHHHh
Confidence 3344567889999999983 3677777887 4667999998443444443 2332 2222 111111 1
Q ss_pred CCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 186 ~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+.+|+|+-.. + . . . +....++|+++|+++.
T Consensus 205 ~~~g~Dvv~d~~-g----~-~---~-~~~~~~~l~~~G~~v~ 236 (349)
T 4a27_A 205 SAEGVDIVLDCL-C----G-D---N-TGKGLSLLKPLGTYIL 236 (349)
T ss_dssp CTTCEEEEEEEC-C----------------CTTEEEEEEEEE
T ss_pred cCCCceEEEECC-C----c-h---h-HHHHHHHhhcCCEEEE
Confidence 236799998532 1 1 1 1 2455689999999874
No 431
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=84.67 E-value=6.6 Score=35.63 Aligned_cols=61 Identities=16% Similarity=0.073 Sum_probs=41.7
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEe-cHH-HHHHHHHHHH-HcCCCCcEEEEEccccccc
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVE-CSQ-MANMAKQIVE-ANGFSNVITVLKGKIEEIE 184 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD-~s~-~~~~a~~~~~-~~~~~~~i~~~~~d~~~~~ 184 (409)
..+++||-.|++.| .++..+++.|+ +|+.++ .++ .++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 35778998887766 34455556676 899999 887 6665555554 333 45889999987754
No 432
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.48 E-value=3.6 Score=37.43 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=60.1
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc---------CCC--------CcEEEEEcccccc
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN---------GFS--------NVITVLKGKIEEI 183 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~---------~~~--------~~i~~~~~d~~~~ 183 (409)
++|.-||+|. +.++..+++.|. +|+.+|.++ .++.+.+.+... ++. .++++ ..+..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788899886 245566666776 899999999 887776653211 110 11232 2333322
Q ss_pred cCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 184 ~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
-...|+|+... .........++..+...++|+.+++-.
T Consensus 83 ---~~~aDlVi~av----~~~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 83 ---VKDADLVIEAV----PESLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp ---TTTCSEEEECC----CSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---hccCCEEEEec----cCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 15689999643 222235567788888889998877643
No 433
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=84.46 E-value=2.9 Score=33.91 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=51.4
Q ss_pred CCEEEEEcCCCChHHHHHH----HcCCCEEEEEecH-H-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeE
Q 015306 123 DKVVLDVGAGTGILSLFCA----KAGAAHVYAVECS-Q-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDI 192 (409)
Q Consensus 123 ~~~VLDlGcG~G~l~~~la----~~g~~~V~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~Dv 192 (409)
..+|+-+|+| ..+..++ +.|. .|+.+|.+ + .++...+... ..+.++.+|..+.. ..-..+|+
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 3468888864 4554444 3454 89999996 4 4444433221 23788999986543 12367999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 193 Vvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
|++.. ........+....+.+.|...++
T Consensus 75 vi~~~------~~d~~n~~~~~~a~~~~~~~~ii 102 (153)
T 1id1_A 75 ILALS------DNDADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp EEECS------SCHHHHHHHHHHHHHHTSSSCEE
T ss_pred EEEec------CChHHHHHHHHHHHHHCCCCEEE
Confidence 99732 11223333444445566665555
No 434
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.27 E-value=4.4 Score=37.11 Aligned_cols=95 Identities=20% Similarity=0.294 Sum_probs=58.8
Q ss_pred CEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHH-------HcCC-C-------------CcEEEEEcc
Q 015306 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVE-------ANGF-S-------------NVITVLKGK 179 (409)
Q Consensus 124 ~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~-------~~~~-~-------------~~i~~~~~d 179 (409)
++|.-||+|. | .++..+++.|. +|+.+|.++ .++.+++.+. ..|. . .++++. .|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 5799999987 3 46667777776 899999998 8776654332 1221 1 124432 23
Q ss_pred cccccCCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 180 IEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 180 ~~~~~~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..+. -..+|+|+.... ........++..+...++|+.+++-
T Consensus 94 ~~~~---~~~aD~Vi~avp----~~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 94 AASV---VHSTDLVVEAIV----ENLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp HHHH---TTSCSEEEECCC----SCHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred HHHh---hcCCCEEEEcCc----CcHHHHHHHHHHHHhhCCCCeEEEE
Confidence 3321 156899986431 1222345677778888888877653
No 435
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=84.25 E-value=1.6 Score=39.60 Aligned_cols=74 Identities=24% Similarity=0.333 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---------CC
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------PV 187 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------~~ 187 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 46789999998776 34556666777 899999988 6666655555544 458999999987531 01
Q ss_pred CceeEEEEec
Q 015306 188 TKVDIIISEW 197 (409)
Q Consensus 188 ~~~DvVvs~~ 197 (409)
+++|++|.+.
T Consensus 108 g~iD~lvnnA 117 (275)
T 4imr_A 108 APVDILVINA 117 (275)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5799999864
No 436
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.04 E-value=2.3 Score=41.17 Aligned_cols=89 Identities=16% Similarity=0.206 Sum_probs=55.6
Q ss_pred CCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeEEEE
Q 015306 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDIIIS 195 (409)
Q Consensus 123 ~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~DvVvs 195 (409)
..+|+-+|+|. | .++..|.+.|. .|++||.++ .++.+++ .| +.++.+|..+.. ..-..+|+||+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 35688888864 2 22333333555 899999999 8887763 23 568889998754 23467999987
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.. ........+-...+.+.|+..++
T Consensus 75 ~~------~~~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 75 AI------DDPQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp CC------SSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CC------CChHHHHHHHHHHHHhCCCCeEE
Confidence 32 11222333344456677876665
No 437
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.03 E-value=3.7 Score=36.91 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+...+...++.++.+|+.+... .
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35789999987665 33445555676 899999988 766666666666655668899999877531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+.+|+||.+.
T Consensus 109 ~g~iD~vi~~A 119 (279)
T 1xg5_A 109 HSGVDICINNA 119 (279)
T ss_dssp HCCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 13699999863
No 438
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.94 E-value=4.9 Score=35.90 Aligned_cols=74 Identities=23% Similarity=0.302 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56889999999887 35666777777 899999998 7776666666554 458999999987531 1
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 25799999864
No 439
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=83.78 E-value=4.2 Score=36.61 Aligned_cols=70 Identities=9% Similarity=0.104 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc---------CCC
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---------LPV 187 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------~~~ 187 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+ ..++.++.+|+.+.. ...
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAANQL 101 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46789999998876 34556666777 899999988 665554443 245899999997753 112
Q ss_pred CceeEEEEe
Q 015306 188 TKVDIIISE 196 (409)
Q Consensus 188 ~~~DvVvs~ 196 (409)
+..|++|.+
T Consensus 102 ~~id~lv~~ 110 (281)
T 3ppi_A 102 GRLRYAVVA 110 (281)
T ss_dssp SEEEEEEEC
T ss_pred CCCCeEEEc
Confidence 578999976
No 440
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=83.68 E-value=3.1 Score=37.47 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----CC-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LP----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999998765 34555566676 899999988 6665555555443 35889999987643 10
Q ss_pred C-CceeEEEEec
Q 015306 187 V-TKVDIIISEW 197 (409)
Q Consensus 187 ~-~~~DvVvs~~ 197 (409)
- +.+|++|.+.
T Consensus 96 ~~g~id~lv~nA 107 (273)
T 1ae1_A 96 FDGKLNILVNNA 107 (273)
T ss_dssp TTSCCCEEEECC
T ss_pred cCCCCcEEEECC
Confidence 1 6799999864
No 441
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.57 E-value=9.5 Score=29.70 Aligned_cols=66 Identities=17% Similarity=0.301 Sum_probs=38.9
Q ss_pred CCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeEEEE
Q 015306 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDIIIS 195 (409)
Q Consensus 123 ~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~DvVvs 195 (409)
+.+|+-+|+|. | .++..+++.|. +|+.+|.++ .++.+++. .+ +.++.+|..+.. .....+|+|+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~---~~----~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAE---ID----ALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---CS----SEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHh---cC----cEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 45789988754 2 22333344554 899999988 66544331 12 456677764432 11257999987
Q ss_pred e
Q 015306 196 E 196 (409)
Q Consensus 196 ~ 196 (409)
.
T Consensus 76 ~ 76 (140)
T 1lss_A 76 V 76 (140)
T ss_dssp C
T ss_pred e
Confidence 4
No 442
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.29 E-value=4.1 Score=35.95 Aligned_cols=74 Identities=20% Similarity=0.312 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999998776 34556666777 899999998 7776666665544 458899999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+.+|++|.+.
T Consensus 84 ~g~id~li~~A 94 (253)
T 3qiv_A 84 FGGIDYLVNNA 94 (253)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14799999864
No 443
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.11 E-value=4.8 Score=39.49 Aligned_cols=97 Identities=10% Similarity=0.164 Sum_probs=60.8
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-H-HHHHHHHHH---HcC-CC--------CcEEEEEcccccccCCC
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-M-ANMAKQIVE---ANG-FS--------NVITVLKGKIEEIELPV 187 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~-~~~a~~~~~---~~~-~~--------~~i~~~~~d~~~~~~~~ 187 (409)
++|.-||+|. +.++..+++.|. .|+.+|.++ . ....++++. ..| +. .++++. .|... -
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~a----l 128 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFHK----L 128 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGGG----C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHHH----H
Confidence 5899999997 466777888877 999999988 3 332222221 222 11 234443 34332 2
Q ss_pred CceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCC
Q 015306 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (409)
Q Consensus 188 ~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (409)
..+|+||... .........++..+...++|+.+++-.+.
T Consensus 129 ~~aDlVIeAV----pe~~~vk~~v~~~l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 129 SNCDLIVESV----IEDMKLKKELFANLENICKSTCIFGTNTS 167 (460)
T ss_dssp TTCSEEEECC----CSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred ccCCEEEEcC----CCCHHHHHHHHHHHHhhCCCCCEEEecCC
Confidence 5799999643 22223456778888899999988864433
No 444
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=82.98 E-value=4.6 Score=36.06 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=47.7
Q ss_pred CCCCEEEEEcCCCCh---HHHHHHHcCCCEEEEEec---HH-HHHHHHHHHHHcCCCCcEEEEEcccccccC--------
Q 015306 121 FKDKVVLDVGAGTGI---LSLFCAKAGAAHVYAVEC---SQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G~---l~~~la~~g~~~V~~vD~---s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-------- 185 (409)
..+++||-.|++.|+ ++..+++.|+ +|+.++. +. .++.+.+.+...+ .++.++.+|+.+...
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHH
Confidence 467899999988762 3444445566 7888764 33 4444444444433 468999999987531
Q ss_pred --CCCceeEEEEec
Q 015306 186 --PVTKVDIIISEW 197 (409)
Q Consensus 186 --~~~~~DvVvs~~ 197 (409)
..++.|++|.+.
T Consensus 86 ~~~~g~iD~lvnnA 99 (262)
T 3ksu_A 86 EKEFGKVDIAINTV 99 (262)
T ss_dssp HHHHCSEEEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 025799999864
No 445
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=82.94 E-value=1.4 Score=43.08 Aligned_cols=96 Identities=21% Similarity=0.145 Sum_probs=59.1
Q ss_pred cCCCCCCEEEEEcC-C-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc-------------
Q 015306 118 KFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI------------- 180 (409)
Q Consensus 118 ~~~~~~~~VLDlGc-G-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~------------- 180 (409)
....+|.+||-.|+ | .|.++..+++ .|+ +|++++.++ -++.+++ .|....+.....+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccch
Confidence 56788999999997 3 3677778887 566 899999888 7777654 34432121111111
Q ss_pred ------cccc-CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 181 ------EEIE-LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 181 ------~~~~-~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
..+. .....+|+|+-.. + . ..+....++|+++|.++.-
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~-G-------~--~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHT-G-------R--VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECS-C-------H--HHHHHHHHHSCTTCEEEES
T ss_pred hhhHHHHHHHHHhCCCceEEEECC-C-------c--hHHHHHHHHHhcCCEEEEE
Confidence 0000 0125799998632 1 1 2345566889999998743
No 446
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=82.76 E-value=1.8 Score=41.18 Aligned_cols=89 Identities=15% Similarity=0.058 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCC--CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----CCCCcee
Q 015306 121 FKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKVD 191 (409)
Q Consensus 121 ~~~~~VLDlGcG--~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D 191 (409)
.+|.+||-+|++ .|.++..+|+ .|+ +|+++. ++ -++.+++ .|.. .++...-.++. ...+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHHccCCcc
Confidence 788999999984 5888888888 677 888885 67 7666654 4542 22322211111 1124599
Q ss_pred EEEEecccccccChhHHHHHHHHHHhcc-cCCeEEEc
Q 015306 192 IIISEWMGYFLLFENMLNTVLYARDKWL-VDDGIVLP 227 (409)
Q Consensus 192 vVvs~~~~~~l~~~~~~~~~l~~~~~~L-kpgG~lip 227 (409)
+|+-.. .. ...+....+.| +++|+++.
T Consensus 234 ~v~d~~-----g~----~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 234 YALDCI-----TN----VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp EEEESS-----CS----HHHHHHHHHHSCTTCEEEEE
T ss_pred EEEECC-----Cc----hHHHHHHHHHhhcCCCEEEE
Confidence 998521 11 12344455677 69999874
No 447
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=82.24 E-value=5 Score=36.25 Aligned_cols=75 Identities=11% Similarity=0.139 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEec-HH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C---
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVEC-SQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~-s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (409)
...+++||-.|++.| .++..+++.|+ +|+.++. ++ .++...+.+...+ .++.++.+|+.+... .
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 356789999998876 35566666777 8999885 55 5555555555544 458999999987541 0
Q ss_pred --CCceeEEEEec
Q 015306 187 --VTKVDIIISEW 197 (409)
Q Consensus 187 --~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 103 ~~~g~iD~lvnnA 115 (280)
T 4da9_A 103 AEFGRIDCLVNNA 115 (280)
T ss_dssp HHHSCCCEEEEEC
T ss_pred HHcCCCCEEEECC
Confidence 14799999874
No 448
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.74 E-value=4.9 Score=36.76 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 57889999999876 34556666776 899999998 7777766666554 358999999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+.+|++|.+.
T Consensus 106 ~g~id~lvnnA 116 (301)
T 3tjr_A 106 LGGVDVVFSNA 116 (301)
T ss_dssp HSSCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 14799999864
No 449
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=81.65 E-value=2.1 Score=38.61 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56889999997776 34556666777 899999988 7766666665554 358899999977531 1
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 101 ~g~iD~lv~nA 111 (271)
T 4ibo_A 101 GIDVDILVNNA 111 (271)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCCEEEECC
Confidence 25799999864
No 450
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.58 E-value=4.3 Score=36.11 Aligned_cols=74 Identities=20% Similarity=0.289 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999998876 34556666777 899999998 7776666666554 458999999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.++.|++|.+.
T Consensus 87 ~g~id~lv~nA 97 (256)
T 3gaf_A 87 FGKITVLVNNA 97 (256)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14799999864
No 451
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.34 E-value=6.8 Score=35.23 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=52.6
Q ss_pred EEEEEcCCC--ChHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCC-ceeEEEEeccc
Q 015306 125 VVLDVGAGT--GILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT-KVDIIISEWMG 199 (409)
Q Consensus 125 ~VLDlGcG~--G~l~~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~DvVvs~~~~ 199 (409)
+|.-||+|. +.++..+++.|. .+|+++|.++ .++.++ ..|... . ...+..+.. . .+|+|+...
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~~---~~~aDvVilav-- 70 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKVE---DFSPDFVMLSS-- 70 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGGG---GTCCSEEEECS--
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHHh---cCCCCEEEEcC--
Confidence 688899886 244555555664 3799999998 766554 234321 1 122332221 4 789998642
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
.......++..+...++++.+++.
T Consensus 71 ----p~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 71 ----PVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ----CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ----CHHHHHHHHHHHHhhCCCCcEEEE
Confidence 123445667777778888886663
No 452
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.25 E-value=8.6 Score=34.75 Aligned_cols=83 Identities=19% Similarity=0.242 Sum_probs=53.5
Q ss_pred CEEEEEcC-CC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 124 KVVLDVGA-GT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 124 ~~VLDlGc-G~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.+|.-||+ |. | .++..+++.|. +|+++|.++ .++.+.+ .|+ .+ .+..+. -..+|+|+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~----~g~----~~--~~~~~~---~~~aDvVi~av-- 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQG----MGI----PL--TDGDGW---IDEADVVVLAL-- 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHH----TTC----CC--CCSSGG---GGTCSEEEECS--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHh----cCC----Cc--CCHHHH---hcCCCEEEEcC--
Confidence 47999999 75 2 45556666775 899999998 6665543 232 11 122221 15689999742
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.......++..+...+++|..++
T Consensus 76 ----~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 76 ----PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ----CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ----CchHHHHHHHHHHHhCCCCCEEE
Confidence 22346677788878888887766
No 453
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.22 E-value=4.5 Score=36.02 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC-CCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C----
Q 015306 121 FKDKVVLDVGA-GTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P---- 186 (409)
Q Consensus 121 ~~~~~VLDlGc-G~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 186 (409)
..+++||-.|+ |.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ ..++.++.+|+.+... .
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 46789999998 666 35666777776 899999988 7766666665443 2469999999987531 0
Q ss_pred -CCceeEEEEec
Q 015306 187 -VTKVDIIISEW 197 (409)
Q Consensus 187 -~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 98 ~~g~id~li~~A 109 (266)
T 3o38_A 98 KAGRLDVLVNNA 109 (266)
T ss_dssp HHSCCCEEEECC
T ss_pred HhCCCcEEEECC
Confidence 14789999864
No 454
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=81.12 E-value=0.49 Score=45.34 Aligned_cols=40 Identities=28% Similarity=0.403 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHH
Q 015306 122 KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQ 162 (409)
Q Consensus 122 ~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~ 162 (409)
++.+|+-+|+|. |..+..+++ .|+ +|+++|.++ .++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 678999999985 444444444 677 899999999 7777654
No 455
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.07 E-value=8.3 Score=40.29 Aligned_cols=99 Identities=20% Similarity=0.270 Sum_probs=67.3
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-----------C---CCCcEEEEEcccccccCC
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-----------G---FSNVITVLKGKIEEIELP 186 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~-----------~---~~~~i~~~~~d~~~~~~~ 186 (409)
++|--||+|+ +.++..++..|. .|+.+|.++ .++.+++.+... . ...++++ ..+..++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH---
Confidence 5999999998 356667777777 999999999 888887765432 0 1122222 2233332
Q ss_pred CCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEccCCce
Q 015306 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASL 232 (409)
Q Consensus 187 ~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (409)
..+|+||=. .......-..++.++..+++|+.++.-++-++
T Consensus 392 -~~aDlVIEA----V~E~l~iK~~vf~~le~~~~~~aIlASNTSsl 432 (742)
T 3zwc_A 392 -STVDLVVEA----VFEDMNLKKKVFAELSALCKPGAFLCTNTSAL 432 (742)
T ss_dssp -GSCSEEEEC----CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred -hhCCEEEEe----ccccHHHHHHHHHHHhhcCCCCceEEecCCcC
Confidence 568998842 24555666788999999999999887655443
No 456
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.04 E-value=4.4 Score=37.49 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC---CcEEE-----EEcccccccCCCCce
Q 015306 122 KDKVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS---NVITV-----LKGKIEEIELPVTKV 190 (409)
Q Consensus 122 ~~~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~---~~i~~-----~~~d~~~~~~~~~~~ 190 (409)
...+|.-||+|. +.++..+++.|. .|+.+ .++ .++..++. ++. ....+ ...+... ...+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~----g~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEAT----GLRLETQSFDEQVKVSASSDPSA----VQGA 87 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHH----CEEEECSSCEEEECCEEESCGGG----GTTC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhC----CeEEEcCCCcEEEeeeeeCCHHH----cCCC
Confidence 456899999996 356667777776 89999 777 66655442 221 00010 0112211 1578
Q ss_pred eEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 191 DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
|+|+.... ...+..+++.+...++++..++.
T Consensus 88 D~vilavk------~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 88 DLVLFCVK------STDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp SEEEECCC------GGGHHHHHHHHTTTSCTTCEEEE
T ss_pred CEEEEEcc------cccHHHHHHHHHHhcCCCCEEEE
Confidence 99986421 23567788888888998877663
No 457
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.02 E-value=5.5 Score=35.58 Aligned_cols=76 Identities=12% Similarity=0.067 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+....-..++.++.+|+.+... .
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46789999998876 34556666777 899999988 766665555542212348899999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.++.|++|.+.
T Consensus 85 ~g~id~lvnnA 95 (265)
T 3lf2_A 85 LGCASILVNNA 95 (265)
T ss_dssp HCSCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 25789999864
No 458
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.91 E-value=7.6 Score=34.83 Aligned_cols=84 Identities=17% Similarity=0.070 Sum_probs=53.0
Q ss_pred EEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccccc
Q 015306 125 VVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYF 201 (409)
Q Consensus 125 ~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~~ 201 (409)
+|.-||||. +.++..+++.|. +|+++|.++ .++.+. ..+... . ...+..+. ..+|+|+....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~----~~g~~~--~-~~~~~~~~----~~~D~vi~av~--- 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAV----ERQLVD--E-AGQDLSLL----QTAKIIFLCTP--- 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG----TTCSEEEECSC---
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH----hCCCCc--c-ccCCHHHh----CCCCEEEEECC---
Confidence 578899876 244555556666 899999998 666543 234322 1 12333332 46899997431
Q ss_pred ccChhHHHHHHHHHHhcccCCeEEE
Q 015306 202 LLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 202 l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
......++..+...++++..++
T Consensus 67 ---~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 ---IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ---HHHHHHHHHHHGGGSCTTCEEE
T ss_pred ---HHHHHHHHHHHHhhCCCCCEEE
Confidence 2355677777878888887665
No 459
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.81 E-value=5.5 Score=35.57 Aligned_cols=74 Identities=20% Similarity=0.244 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEccccccc-----CCCCcee
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKVD 191 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D 191 (409)
...|+++|--|.+.| ..+..+++.|+ +|+.+|.+.. +.+.+.+...+ .++.++.+|+.+.. +..++.|
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~-~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP-DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC-HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH-HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 357899999998887 45677777887 8999988741 12223344444 35889999997753 2347899
Q ss_pred EEEEec
Q 015306 192 IIISEW 197 (409)
Q Consensus 192 vVvs~~ 197 (409)
++|.+.
T Consensus 82 iLVNNA 87 (247)
T 4hp8_A 82 ILVNNA 87 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999863
No 460
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.79 E-value=5.5 Score=35.91 Aligned_cols=74 Identities=24% Similarity=0.363 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH--HHHHHHHHHHHcCCCCcEEEEEccccccc-----CC----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ--MANMAKQIVEANGFSNVITVLKGKIEEIE-----LP---- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~--~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.+. ..+.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 35778998888765 34445555676 899988764 3444444444433 35889999987643 00
Q ss_pred -CCceeEEEEec
Q 015306 187 -VTKVDIIISEW 197 (409)
Q Consensus 187 -~~~~DvVvs~~ 197 (409)
.+.+|++|.+.
T Consensus 104 ~~g~iD~lv~~A 115 (283)
T 1g0o_A 104 IFGKLDIVCSNS 115 (283)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 14789999864
No 461
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=80.70 E-value=3 Score=33.98 Aligned_cols=69 Identities=19% Similarity=0.252 Sum_probs=40.6
Q ss_pred CCCCCEEEEEcCCC-Ch-HHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeE
Q 015306 120 LFKDKVVLDVGAGT-GI-LSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDI 192 (409)
Q Consensus 120 ~~~~~~VLDlGcG~-G~-l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~Dv 192 (409)
..++.+|+-+|+|. |. ++..+.+.|. +|+++|.++ .++.++. ..+ +.++.+|..+.. .....+|+
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~g----~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EFS----GFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TCC----SEEEESCTTSHHHHHTTTGGGCSE
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cCC----CcEEEecCCCHHHHHHcCcccCCE
Confidence 35678999999865 32 2333444565 899999988 5543321 112 445666654321 11257999
Q ss_pred EEEe
Q 015306 193 IISE 196 (409)
Q Consensus 193 Vvs~ 196 (409)
|+..
T Consensus 88 Vi~~ 91 (155)
T 2g1u_A 88 VFAF 91 (155)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9874
No 462
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=80.69 E-value=11 Score=34.25 Aligned_cols=89 Identities=20% Similarity=0.209 Sum_probs=54.0
Q ss_pred CEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEE--------cccccc-cCCC--Cc
Q 015306 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLK--------GKIEEI-ELPV--TK 189 (409)
Q Consensus 124 ~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~--------~d~~~~-~~~~--~~ 189 (409)
.+|.-||+|. | .++..+++.|. +|+.+|.++ .++.+++. + +.+.. .++.+. .... ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----G----LIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----C----EEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----C----EEEEeCCCeeEecceeecchhhcccCCC
Confidence 3789999985 2 44555666666 899999988 66655432 3 22211 111111 1111 27
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+|+... .......++..+...++++..++.
T Consensus 75 ~d~vi~~v------~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALT------KAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECS------CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEe------ccccHHHHHHHHHHhcCCCCEEEE
Confidence 89998742 223567778888888888877764
No 463
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.47 E-value=4.9 Score=35.62 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcccccccC----------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEIEL---------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~---------- 185 (409)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+....-. .++.++.+|+.+...
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 46789999998876 35566666777 899999988 766665555443211 458899999987531
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 84 ~~g~iD~lvnnA 95 (250)
T 3nyw_A 84 KYGAVDILVNAA 95 (250)
T ss_dssp HHCCEEEEEECC
T ss_pred hcCCCCEEEECC
Confidence 025799999864
No 464
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=80.46 E-value=0.51 Score=45.59 Aligned_cols=40 Identities=23% Similarity=0.344 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHH
Q 015306 122 KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQ 162 (409)
Q Consensus 122 ~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~ 162 (409)
++.+|+-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 578999999985 555545555 677 899999999 7777655
No 465
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=80.36 E-value=9.4 Score=37.24 Aligned_cols=86 Identities=23% Similarity=0.227 Sum_probs=50.7
Q ss_pred CCCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEE
Q 015306 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs 195 (409)
....|++|+-+|+|. |......++ .|+ +|+++|.++ ....+. ..| +++ .++.++- ...|+|+.
T Consensus 243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~----~~G----~~v--v~LeElL---~~ADIVv~ 308 (464)
T 3n58_A 243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAA----MDG----FEV--VTLDDAA---STADIVVT 308 (464)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHH----HTT----CEE--CCHHHHG---GGCSEEEE
T ss_pred CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHH----hcC----cee--ccHHHHH---hhCCEEEE
Confidence 357899999999886 433333333 566 999999988 443332 223 232 2444432 57899986
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
..-...+.. .+....+|+|++++
T Consensus 309 atgt~~lI~--------~e~l~~MK~GAILI 331 (464)
T 3n58_A 309 TTGNKDVIT--------IDHMRKMKDMCIVG 331 (464)
T ss_dssp CCSSSSSBC--------HHHHHHSCTTEEEE
T ss_pred CCCCccccC--------HHHHhcCCCCeEEE
Confidence 321111111 23336789999887
No 466
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.23 E-value=5.1 Score=35.71 Aligned_cols=75 Identities=13% Similarity=0.168 Sum_probs=53.5
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C----
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P---- 186 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 186 (409)
...+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHH
Confidence 356789999998765 33455556676 899999998 7776666666554 458999999977531 0
Q ss_pred -CCceeEEEEec
Q 015306 187 -VTKVDIIISEW 197 (409)
Q Consensus 187 -~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 103 ~~g~id~lv~~A 114 (262)
T 3rkr_A 103 AHGRCDVLVNNA 114 (262)
T ss_dssp HHSCCSEEEECC
T ss_pred hcCCCCEEEECC
Confidence 24799999864
No 467
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=80.13 E-value=4.2 Score=36.07 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccc--cccc-----C----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--EEIE-----L---- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~-----~---- 185 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+- .++.++..|+ .+.. +
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 56789999998876 34556666777 899999988 66655555544332 2478888888 4432 0
Q ss_pred -CCCceeEEEEec
Q 015306 186 -PVTKVDIIISEW 197 (409)
Q Consensus 186 -~~~~~DvVvs~~ 197 (409)
..++.|++|.+.
T Consensus 88 ~~~g~id~lv~nA 100 (252)
T 3f1l_A 88 VNYPRLDGVLHNA 100 (252)
T ss_dssp HHCSCCSEEEECC
T ss_pred HhCCCCCEEEECC
Confidence 125799999864
No 468
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.12 E-value=4.8 Score=37.38 Aligned_cols=87 Identities=14% Similarity=0.167 Sum_probs=48.6
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH---H-HHH-HHHHHHHHcCCCCcEEEEEc
Q 015306 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS---Q-MAN-MAKQIVEANGFSNVITVLKG 178 (409)
Q Consensus 107 ~~~~~~~l~~~~~~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s---~-~~~-~a~~~~~~~~~~~~i~~~~~ 178 (409)
..-+.+.|........+++||-+|+| | ..+..+++.|+++|+.++-+ . .++ .+.+.....+. .+.++..
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~--~~~~~~~ 214 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDC--KAQLFDI 214 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSC--EEEEEET
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCC--ceEEecc
Confidence 33566666654444678999999987 4 23445556788899999887 5 333 33333222221 2443322
Q ss_pred c-cccccCCCCceeEEEEe
Q 015306 179 K-IEEIELPVTKVDIIISE 196 (409)
Q Consensus 179 d-~~~~~~~~~~~DvVvs~ 196 (409)
+ ..++.-.-..+|+||..
T Consensus 215 ~~~~~l~~~l~~aDiIINa 233 (315)
T 3tnl_A 215 EDHEQLRKEIAESVIFTNA 233 (315)
T ss_dssp TCHHHHHHHHHTCSEEEEC
T ss_pred chHHHHHhhhcCCCEEEEC
Confidence 1 11121111469999975
No 469
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.05 E-value=3.9 Score=37.14 Aligned_cols=71 Identities=20% Similarity=0.309 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----C-CCCce
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----L-PVTKV 190 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~~ 190 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+. +..++.++.+|+.+.. . .-+.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~v~~~~~~~~~i 87 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAART-----MAGQVEVRELDLQDLSSVRRFADGVSGA 87 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTT-----SSSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHH-----hcCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence 56789999998876 34555666676 899999988 65544332 2356999999998753 1 11578
Q ss_pred eEEEEec
Q 015306 191 DIIISEW 197 (409)
Q Consensus 191 DvVvs~~ 197 (409)
|++|.+.
T Consensus 88 D~lv~nA 94 (291)
T 3rd5_A 88 DVLINNA 94 (291)
T ss_dssp EEEEECC
T ss_pred CEEEECC
Confidence 9999864
No 470
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.00 E-value=4.2 Score=38.49 Aligned_cols=94 Identities=13% Similarity=0.068 Sum_probs=57.9
Q ss_pred CCEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHH------HcCCCCcEEEEEcccccccCCCCceeEE
Q 015306 123 DKVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVE------ANGFSNVITVLKGKIEEIELPVTKVDII 193 (409)
Q Consensus 123 ~~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~------~~~~~~~i~~~~~d~~~~~~~~~~~DvV 193 (409)
..+|.-||+|. +.++..+++.|. +|+.+|.++ .++..++.-. ...++.++.+. .|..+.. ...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~---~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASL---EGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHH---TTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHH---hcCCEE
Confidence 35799999986 245566666665 799999998 7666554311 01112223332 2332221 468999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 194 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+... ....+..+++.+...|+|+..++.
T Consensus 104 ilaV------p~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 104 LIVV------PSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp EECC------CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred EECC------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 8642 224667888888889998887763
No 471
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=79.85 E-value=7.8 Score=35.10 Aligned_cols=81 Identities=16% Similarity=0.133 Sum_probs=47.5
Q ss_pred HHHHHH-HHhccCCCCCCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc
Q 015306 108 KSYQNV-IYQNKFLFKDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (409)
Q Consensus 108 ~~~~~~-l~~~~~~~~~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (409)
.-+... |........+++||-+|+|. | ..+..+++.|+.+|+.++-++ -++...+.+.. ..+... ...++
T Consensus 104 ~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l 177 (272)
T 3pwz_A 104 IGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEAL 177 (272)
T ss_dssp HHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGG
T ss_pred HHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHh
Confidence 345565 54333345789999999972 1 223445557888999999887 54443333321 124443 33333
Q ss_pred cCCCCceeEEEEe
Q 015306 184 ELPVTKVDIIISE 196 (409)
Q Consensus 184 ~~~~~~~DvVvs~ 196 (409)
. ...+|+||..
T Consensus 178 ~--~~~~DivIna 188 (272)
T 3pwz_A 178 E--GQSFDIVVNA 188 (272)
T ss_dssp T--TCCCSEEEEC
T ss_pred c--ccCCCEEEEC
Confidence 2 2679999985
No 472
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.69 E-value=4.8 Score=36.13 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------CC
Q 015306 122 KDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------PV 187 (409)
Q Consensus 122 ~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~~ 187 (409)
.+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999998876 34556666777 899999998 7776666666554 458899999977531 02
Q ss_pred CceeEEEEec
Q 015306 188 TKVDIIISEW 197 (409)
Q Consensus 188 ~~~DvVvs~~ 197 (409)
+++|++|.+.
T Consensus 80 g~iD~lVnnA 89 (264)
T 3tfo_A 80 GRIDVLVNNA 89 (264)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5799999864
No 473
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=79.69 E-value=4.9 Score=36.44 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999998876 34556666777 899999988 6666655554433 458999999977531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 103 ~g~iD~lVnnA 113 (283)
T 3v8b_A 103 FGHLDIVVANA 113 (283)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 25799999864
No 474
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=79.66 E-value=7.3 Score=37.80 Aligned_cols=84 Identities=29% Similarity=0.329 Sum_probs=50.2
Q ss_pred CCCCCEEEEEcCCC-ChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEe
Q 015306 120 LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (409)
Q Consensus 120 ~~~~~~VLDlGcG~-G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~ 196 (409)
...|++|+-+|+|. |......++ .|+ +|+++|.++ ....|. ..|. ++ .++.+.- ...|+|+.-
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~----~~G~----~v--~~Leeal---~~ADIVi~a 282 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQAC----MDGF----RL--VKLNEVI---RQVDIVITC 282 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTC----EE--CCHHHHT---TTCSEEEEC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHH----HcCC----Ee--ccHHHHH---hcCCEEEEC
Confidence 46899999999987 433333444 566 899999998 544332 2232 22 2444432 568999872
Q ss_pred ccc-ccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 197 WMG-YFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 197 ~~~-~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
. + ..+.. ......+|+|++++
T Consensus 283 t-gt~~lI~--------~e~l~~MK~gailI 304 (435)
T 3gvp_A 283 T-GNKNVVT--------REHLDRMKNSCIVC 304 (435)
T ss_dssp S-SCSCSBC--------HHHHHHSCTTEEEE
T ss_pred C-CCcccCC--------HHHHHhcCCCcEEE
Confidence 1 1 11111 13336789999887
No 475
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=79.42 E-value=12 Score=36.99 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=60.9
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH-------cCC-C--------CcEEEEEccccccc
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA-------NGF-S--------NVITVLKGKIEEIE 184 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~-------~~~-~--------~~i~~~~~d~~~~~ 184 (409)
++|.-||+|. +.++..+++.|. .|+.+|.++ .++.+.+.+.. .|. . .++++. .|...+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~- 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIHAL- 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGGGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHHHh-
Confidence 3677889986 356667777776 899999999 88887665322 111 0 124432 333321
Q ss_pred CCCCceeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 185 ~~~~~~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
...|+||... .........++..+...++|+.+++-.
T Consensus 83 ---~~aDlVIeAV----pe~~~vk~~v~~~l~~~~~~~~Ilasn 119 (483)
T 3mog_A 83 ---AAADLVIEAA----SERLEVKKALFAQLAEVCPPQTLLTTN 119 (483)
T ss_dssp ---GGCSEEEECC----CCCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---cCCCEEEEcC----CCcHHHHHHHHHHHHHhhccCcEEEec
Confidence 5789999643 222234457788888899999887643
No 476
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=79.36 E-value=1.8 Score=40.64 Aligned_cols=89 Identities=18% Similarity=0.115 Sum_probs=51.4
Q ss_pred CCC-CEEEEE-cCC-CChHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc------CCCCc
Q 015306 121 FKD-KVVLDV-GAG-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPVTK 189 (409)
Q Consensus 121 ~~~-~~VLDl-GcG-~G~l~~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 189 (409)
.++ .+||-. |+| .|.++..+++ .|+ +|++++.++ -++.+++. |.. .++..+-.++. .....
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDI----GAA---HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHH----TCS---EEEETTSTTHHHHHHHHHHHHC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC---EEEECCcHHHHHHHHHHhcCCC
Confidence 344 567654 333 2566666666 677 999999988 87777642 332 22322211111 01136
Q ss_pred eeEEEEecccccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 190 ~DvVvs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
+|+|+-.. + .. .+....+.|+++|+++.
T Consensus 234 ~D~vid~~-g-----~~----~~~~~~~~l~~~G~iv~ 261 (349)
T 3pi7_A 234 PRIFLDAV-T-----GP----LASAIFNAMPKRARWII 261 (349)
T ss_dssp CCEEEESS-C-----HH----HHHHHHHHSCTTCEEEE
T ss_pred CcEEEECC-C-----Ch----hHHHHHhhhcCCCEEEE
Confidence 99998532 1 11 12455688999999874
No 477
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=79.36 E-value=3.1 Score=39.27 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=34.9
Q ss_pred cCCCCCCEEEEEcCCC-ChHHHHHHH-c-CCCEEEEEecHH-HHHHHHH
Q 015306 118 KFLFKDKVVLDVGAGT-GILSLFCAK-A-GAAHVYAVECSQ-MANMAKQ 162 (409)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~l~~~la~-~-g~~~V~~vD~s~-~~~~a~~ 162 (409)
....++.+||-+|+|. |.++..+|+ . |+ +|+++|.++ -++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH
Confidence 4567899999999864 566777777 6 76 899999998 7777764
No 478
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=79.34 E-value=4.1 Score=35.84 Aligned_cols=73 Identities=16% Similarity=0.243 Sum_probs=51.2
Q ss_pred CCCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----C-CCC
Q 015306 119 FLFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----L-PVT 188 (409)
Q Consensus 119 ~~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~ 188 (409)
...++++||-.|++.| .++..+++.|+ +|+.++.++ .++...+.+. .++.++.+|+.+.. + ..+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCS
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcC
Confidence 3567889999998776 34556666776 899999988 6665544432 35889999987643 1 125
Q ss_pred ceeEEEEec
Q 015306 189 KVDIIISEW 197 (409)
Q Consensus 189 ~~DvVvs~~ 197 (409)
++|++|.+.
T Consensus 84 ~id~li~~A 92 (249)
T 3f9i_A 84 NLDILVCNA 92 (249)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 799999864
No 479
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=79.30 E-value=6.6 Score=35.33 Aligned_cols=76 Identities=24% Similarity=0.193 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC-CCcEEEEEcccccccC-----C----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF-SNVITVLKGKIEEIEL-----P---- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~~-----~---- 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+- ..++.++.+|+.+... .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 46789999998776 34556666777 899999988 77666666655442 1268999999987531 0
Q ss_pred -CCceeEEEEec
Q 015306 187 -VTKVDIIISEW 197 (409)
Q Consensus 187 -~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 88 ~~g~id~lv~nA 99 (281)
T 3svt_A 88 WHGRLHGVVHCA 99 (281)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 24789999864
No 480
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=79.29 E-value=5.7 Score=35.83 Aligned_cols=74 Identities=14% Similarity=0.177 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999998876 34556666777 899999988 7776666665544 458999999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 99 ~g~id~lv~nA 109 (279)
T 3sju_A 99 FGPIGILVNSA 109 (279)
T ss_dssp HCSCCEEEECC
T ss_pred cCCCcEEEECC
Confidence 24789999864
No 481
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=78.98 E-value=6.7 Score=34.95 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+.......++.++.+|+.+... .
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999998776 34555666676 899999988 666555444433112458899999877531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 90 ~g~id~lv~nA 100 (267)
T 1iy8_A 90 FGRIDGFFNNA 100 (267)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14689999864
No 482
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=78.94 E-value=7.7 Score=34.56 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=54.3
Q ss_pred CCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 123 ~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
+.+|.-||||. | .++..+++.|...|+.+|.++ .++.+.+. .+ +.+ ..+..+.. ..+|+|+....
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~---~g----~~~-~~~~~~~~---~~~Dvvi~av~- 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQK---VE----AEY-TTDLAEVN---PYAKLYIVSLK- 77 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH---TT----CEE-ESCGGGSC---SCCSEEEECCC-
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH---cC----Cce-eCCHHHHh---cCCCEEEEecC-
Confidence 35789999975 2 345555566765589999998 66554432 12 222 23443321 46899997432
Q ss_pred ccccChhHHHHHHHHHHhcccCCeEEEc
Q 015306 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
......++..+...+++|..++-
T Consensus 78 -----~~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 78 -----DSAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp -----HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred -----HHHHHHHHHHHHhhcCCCcEEEE
Confidence 22346677777777888877663
No 483
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=78.75 E-value=11 Score=37.20 Aligned_cols=84 Identities=24% Similarity=0.348 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEE
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs 195 (409)
...|++|+-+|+| | ..+..++..|+ +|+.+|.++ ....+.. .+ +. ..+..+. ...+|+|+.
T Consensus 262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~----~g----~d--v~~lee~---~~~aDvVi~ 326 (488)
T 3ond_A 262 MIAGKVAVVAGYG-DVGKGCAAALKQAGA-RVIVTEIDPICALQATM----EG----LQ--VLTLEDV---VSEADIFVT 326 (488)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TT----CE--ECCGGGT---TTTCSEEEE
T ss_pred cccCCEEEEECCC-HHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH----hC----Cc--cCCHHHH---HHhcCEEEe
Confidence 3689999999998 3 23444444677 999999998 5544432 22 11 1233332 257998886
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.. +. ... +-....+.+++|++++
T Consensus 327 at-G~----~~v---l~~e~l~~mk~gaiVv 349 (488)
T 3ond_A 327 TT-GN----KDI---IMLDHMKKMKNNAIVC 349 (488)
T ss_dssp CS-SC----SCS---BCHHHHTTSCTTEEEE
T ss_pred CC-CC----hhh---hhHHHHHhcCCCeEEE
Confidence 32 11 011 1122346789999876
No 484
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=78.30 E-value=15 Score=32.44 Aligned_cols=73 Identities=15% Similarity=0.133 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCC--CC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----------
Q 015306 121 FKDKVVLDVGAG--TG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---------- 184 (409)
Q Consensus 121 ~~~~~VLDlGcG--~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------- 184 (409)
..+++||-.|++ .| .++..+++.|+ +|+.++.++ ..+.+.+.....+ . ..++.+|+.+..
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~--~-~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG--S-DIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT--C-CCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC--C-cEEEEccCCCHHHHHHHHHHHH
Confidence 357889999986 33 23445555676 899998775 4444443333322 2 367888887643
Q ss_pred CCCCceeEEEEec
Q 015306 185 LPVTKVDIIISEW 197 (409)
Q Consensus 185 ~~~~~~DvVvs~~ 197 (409)
-..+++|++|.+.
T Consensus 83 ~~~g~iD~lv~~A 95 (265)
T 1qsg_A 83 KVWPKFDGFVHSI 95 (265)
T ss_dssp TTCSSEEEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0125799999864
No 485
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=78.05 E-value=8.7 Score=34.38 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=46.0
Q ss_pred CCCCEEEEEcCC-CChHHH----HHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC---------
Q 015306 121 FKDKVVLDVGAG-TGILSL----FCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG-~G~l~~----~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (409)
..+++||-.|++ +|.++. .+++.|+ +|+.++.++ ..+.+.+.....+ .+.++.+|+.+...
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVK 79 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHH
Confidence 357899999986 244444 4444566 899998876 4444444333322 26788899877430
Q ss_pred -CCCceeEEEEec
Q 015306 186 -PVTKVDIIISEW 197 (409)
Q Consensus 186 -~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 80 ~~~g~id~lv~nA 92 (275)
T 2pd4_A 80 KDLGSLDFIVHSV 92 (275)
T ss_dssp HHTSCEEEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 125799999864
No 486
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.94 E-value=3.7 Score=37.33 Aligned_cols=85 Identities=15% Similarity=0.010 Sum_probs=47.8
Q ss_pred cCCCChHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEE----------cccccccCCCCceeEEEEeccc
Q 015306 130 GAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLK----------GKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 130 GcG~G~l~~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~~~~~i~~~~----------~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.++.|.....+.+....+|..||..-. --..+|+++. +|+.+.... +++|+|++++-.
T Consensus 149 ~~~~~~~~~~~~k~~g~~vl~v~~~~~-----------~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~-~k~DvV~SDMAp 216 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLKGRTVLVVGEKLS-----------VPGKMVDWLSDRPEATFRARLDLGIPGDV-PKYDIIFVNVRT 216 (320)
T ss_dssp CCCCCCCHHHHHTSSCSEEEEEESCCC-----------CTTSEEEEEESSTTCSEECCGGGCSCTTS-CCEEEEEEECCC
T ss_pred ccCCCCHHHHHhhCCCcEEEEEecccc-----------cCCceeEeeccCCCceeecccccCCcccc-CcCCEEEEcCCC
Confidence 455666666676644446666642210 0013355443 444443322 779999998644
Q ss_pred ccccCh--------hHHHHHHHHHHhcccCCeEEE
Q 015306 200 YFLLFE--------NMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 200 ~~l~~~--------~~~~~~l~~~~~~LkpgG~li 226 (409)
..-.+. ..+.-+++-...+|+|||.++
T Consensus 217 n~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV 251 (320)
T 2hwk_A 217 PYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCV 251 (320)
T ss_dssp CCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEE
T ss_pred CCCCccccccchHHHHHHHHHHHHHHhcCCCceEE
Confidence 333222 122334566679999999988
No 487
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=77.84 E-value=8 Score=34.05 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++...+.+...+ .++.++.+|+.+... .
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 35788999997765 33445555676 899999987 6655555555443 358999999977431 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|+||.+.
T Consensus 88 ~~~id~vi~~A 98 (260)
T 3awd_A 88 EGRVDILVACA 98 (260)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999863
No 488
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=77.81 E-value=7.9 Score=35.25 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=52.3
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH------------H-HHHHHHHHHHHcCCCCcEEEEEcccccc
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS------------Q-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s------------~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (409)
...+++||-.|++.| .++..+++.|+ +|+++|.+ + .++.+.+.+...+ .++.++.+|+.+.
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDF 101 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCH
Confidence 356889999999887 34566667777 89999876 4 4444444454444 4589999999875
Q ss_pred cC----------CCCceeEEEEec
Q 015306 184 EL----------PVTKVDIIISEW 197 (409)
Q Consensus 184 ~~----------~~~~~DvVvs~~ 197 (409)
.. ..++.|++|.+.
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECC
Confidence 31 125799999864
No 489
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=77.67 E-value=9.6 Score=34.03 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc-----C-----
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----L----- 185 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 185 (409)
...+++||-.|++.| .++..+++.|+ +|++++.++ .++...+.+...+ .++.++.+|+.+.. +
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 356789999997765 33444555676 899999988 6666555555543 35899999987743 0
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
..+.+|+||.+.
T Consensus 105 ~~g~iD~li~~A 116 (272)
T 1yb1_A 105 EIGDVSILVNNA 116 (272)
T ss_dssp HTCCCSEEEECC
T ss_pred HCCCCcEEEECC
Confidence 024799999864
No 490
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.51 E-value=7.3 Score=33.60 Aligned_cols=86 Identities=14% Similarity=0.087 Sum_probs=50.5
Q ss_pred EEEEEcCCCChHHHHHHH----cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccccccc----CCCCceeEEEE
Q 015306 125 VVLDVGAGTGILSLFCAK----AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDIIIS 195 (409)
Q Consensus 125 ~VLDlGcG~G~l~~~la~----~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~DvVvs 195 (409)
+|+-+|+ |.++..+++ .|. .|+.+|.++ .++.+.+. .+ +.++.+|..+.. ..-..+|+|++
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~---~~----~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKK---LK----ATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHH---SS----SEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHH---cC----CeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 4777776 455554444 455 899999999 76654332 22 578899987643 12367999987
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCeEEE
Q 015306 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (409)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (409)
.. .......++....+.+.+...++
T Consensus 72 ~~------~~d~~n~~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 72 LT------PRDEVNLFIAQLVMKDFGVKRVV 96 (218)
T ss_dssp CC------SCHHHHHHHHHHHHHTSCCCEEE
T ss_pred ec------CCcHHHHHHHHHHHHHcCCCeEE
Confidence 32 11223333444445555555554
No 491
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=77.28 E-value=5.7 Score=35.98 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccc-cC----------
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-EL---------- 185 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~---------- 185 (409)
..+++||-.|++.| .++..+++.|+ +|++++.++ ..+.+.+.+...+- .++.++.+|+.+. ..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 45788999998776 34555666677 899999988 66666555554432 4599999999876 20
Q ss_pred CCCceeEEEEec
Q 015306 186 PVTKVDIIISEW 197 (409)
Q Consensus 186 ~~~~~DvVvs~~ 197 (409)
..+++|++|.+.
T Consensus 88 ~~g~iD~lv~nA 99 (311)
T 3o26_A 88 HFGKLDILVNNA 99 (311)
T ss_dssp HHSSCCEEEECC
T ss_pred hCCCCCEEEECC
Confidence 025799999874
No 492
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=77.14 E-value=4 Score=36.30 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC----------C
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999898776 34556666777 899999998 7776666554333 468999999987531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 81 ~g~id~lv~nA 91 (257)
T 3imf_A 81 FGRIDILINNA 91 (257)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 24789999864
No 493
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=77.09 E-value=5.3 Score=36.03 Aligned_cols=74 Identities=20% Similarity=0.264 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccC-----C-----
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (409)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999998876 34556666777 899999988 6666666665544 358889999977531 0
Q ss_pred CCceeEEEEec
Q 015306 187 VTKVDIIISEW 197 (409)
Q Consensus 187 ~~~~DvVvs~~ 197 (409)
.+++|++|.+.
T Consensus 107 ~g~iD~lvnnA 117 (276)
T 3r1i_A 107 LGGIDIAVCNA 117 (276)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14799999864
No 494
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.04 E-value=7.8 Score=34.70 Aligned_cols=74 Identities=23% Similarity=0.341 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH------------H-HHHHHHHHHHHcCCCCcEEEEEccccccc
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS------------Q-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s------------~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (409)
..+++||-.|++.| .++..+++.|+ +|+++|.+ + .++...+.+...+ .++.++.+|+.+..
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRE 87 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHH
Confidence 56789999998776 35566666777 89999875 4 4444444444443 45999999998753
Q ss_pred C-----C-----CCceeEEEEec
Q 015306 185 L-----P-----VTKVDIIISEW 197 (409)
Q Consensus 185 ~-----~-----~~~~DvVvs~~ 197 (409)
. . .+++|++|.+.
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 1 0 14799999864
No 495
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=76.86 E-value=17 Score=32.63 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=53.3
Q ss_pred CEEEEEcCCC--ChHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEeccc
Q 015306 124 KVVLDVGAGT--GILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~ 199 (409)
.+|.-||+|. +.++..+++.| ..+|+++|.++ .++.+.+ .+... ....+..+. -...|+|+...
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~---~~~aDvVilav-- 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD---EATADFKVF---AALADVIILAV-- 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS---EEESCTTTT---GGGCSEEEECS--
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc---cccCCHHHh---hcCCCEEEEcC--
Confidence 4789999886 34455566654 35899999998 6665543 33311 112233222 15689998742
Q ss_pred ccccChhHHHHHHHHHHhc-ccCCeEEE
Q 015306 200 YFLLFENMLNTVLYARDKW-LVDDGIVL 226 (409)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~-LkpgG~li 226 (409)
.......++..+... |+++.+++
T Consensus 75 ----p~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 ----PIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ----CHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ----CHHHHHHHHHHHHhcCCCCCCEEE
Confidence 223446777777777 88887666
No 496
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=76.75 E-value=9.5 Score=37.25 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=55.8
Q ss_pred CEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHH------------HHcCCCCcEEEEEcccccccCCCC
Q 015306 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIV------------EANGFSNVITVLKGKIEEIELPVT 188 (409)
Q Consensus 124 ~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~------------~~~~~~~~i~~~~~d~~~~~~~~~ 188 (409)
.+|.-||+|. | .++..+++.|. +|+++|.++ .++..++.. ..+--..++++. .|..+.. .
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~---~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAV---P 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHG---G
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHH---h
Confidence 4688888875 2 44556666776 999999999 776655410 000001224332 3333211 4
Q ss_pred ceeEEEEeccccc-c---cChhHHHHHHHHHHhcccCCeEEEc
Q 015306 189 KVDIIISEWMGYF-L---LFENMLNTVLYARDKWLVDDGIVLP 227 (409)
Q Consensus 189 ~~DvVvs~~~~~~-l---~~~~~~~~~l~~~~~~LkpgG~lip 227 (409)
..|+|+....... - .....+..+++.+...|++|.+++-
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~ 120 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVT 120 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEE
Confidence 6898886421110 0 0111566777788888888877763
No 497
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=76.56 E-value=8.2 Score=34.74 Aligned_cols=74 Identities=20% Similarity=0.319 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEecH----------------H-HHHHHHHHHHHcCCCCcEEEEEccc
Q 015306 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS----------------Q-MANMAKQIVEANGFSNVITVLKGKI 180 (409)
Q Consensus 121 ~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~s----------------~-~~~~a~~~~~~~~~~~~i~~~~~d~ 180 (409)
..+++||-.|++.| .++..+++.|+ +|+++|.+ + .++.+.+.+...+ .++.++.+|+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 85 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDV 85 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCC
Confidence 56889999999887 35666667777 89999876 4 4444444444333 4689999999
Q ss_pred ccccC----------CCCceeEEEEec
Q 015306 181 EEIEL----------PVTKVDIIISEW 197 (409)
Q Consensus 181 ~~~~~----------~~~~~DvVvs~~ 197 (409)
.+... ..+++|++|.+.
T Consensus 86 ~~~~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 87531 024799999864
No 498
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=76.37 E-value=5.9 Score=39.07 Aligned_cols=102 Identities=12% Similarity=0.119 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCC-C-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH---cCC---------CCcEEEEEcccccccCC
Q 015306 122 KDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA---NGF---------SNVITVLKGKIEEIELP 186 (409)
Q Consensus 122 ~~~~VLDlGcG~-G-~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~---~~~---------~~~i~~~~~d~~~~~~~ 186 (409)
...+|.-||+|. | .++..+++.|. +|+++|.++ .++.+++.... .++ ..++.+. .|..+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a--- 81 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAA--- 81 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHH---
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHH---
Confidence 456899999996 3 45667777776 899999998 77766542100 010 0123322 222211
Q ss_pred CCceeEEEEecccc----cccChhHHHHHHHHHHhcccCCeEEEcc
Q 015306 187 VTKVDIIISEWMGY----FLLFENMLNTVLYARDKWLVDDGIVLPD 228 (409)
Q Consensus 187 ~~~~DvVvs~~~~~----~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (409)
-..+|+|+...... .-.....+..+++.+...|++|.+++..
T Consensus 82 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 14589888642110 0001145667778888889998877643
No 499
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=76.27 E-value=8.6 Score=34.54 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCCC---hHHHHHHHcCCCEEEEEec-------------HH-HHHHHHHHHHHcCCCCcEEEEEccccc
Q 015306 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVEC-------------SQ-MANMAKQIVEANGFSNVITVLKGKIEE 182 (409)
Q Consensus 120 ~~~~~~VLDlGcG~G---~l~~~la~~g~~~V~~vD~-------------s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~ 182 (409)
...+++||-.|++.| .++..+++.|+ +|+++|. ++ .++.+.+.+...+ .++.++.+|+.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD 88 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 357889999998887 35566667777 8999987 55 5555555555444 458899999977
Q ss_pred ccC----------CCCceeEEEEec
Q 015306 183 IEL----------PVTKVDIIISEW 197 (409)
Q Consensus 183 ~~~----------~~~~~DvVvs~~ 197 (409)
... ..++.|++|.+.
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 531 024799999863
No 500
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=76.06 E-value=6.3 Score=36.06 Aligned_cols=86 Identities=16% Similarity=0.122 Sum_probs=52.4
Q ss_pred CEEEEEcCCC--ChHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcccccccCCCCceeEEEEecccc
Q 015306 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (409)
Q Consensus 124 ~~VLDlGcG~--G~l~~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~DvVvs~~~~~ 200 (409)
.+|.-||+|. +.++..+++.|. +|+++|.++ .++.+.+ .|. .....+..+.. ...|+|+....
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~----~g~----~~~~~~~~e~~---~~aDvvi~~vp-- 73 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLA----EGA----CGAAASAREFA---GVVDALVILVV-- 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC----SEEESSSTTTT---TTCSEEEECCS--
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----cCC----ccccCCHHHHH---hcCCEEEEECC--
Confidence 5789999886 245556666776 899999998 7665543 232 11233333322 56899987421
Q ss_pred cccChhHHHHHH---HHHHhcccCCeEEE
Q 015306 201 FLLFENMLNTVL---YARDKWLVDDGIVL 226 (409)
Q Consensus 201 ~l~~~~~~~~~l---~~~~~~LkpgG~li 226 (409)
.......++ +.+...|++|..++
T Consensus 74 ---~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 74 ---NAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp ---SHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred ---CHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 222344554 45556778887766
Done!