Query 015309
Match_columns 409
No_of_seqs 324 out of 1876
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 10:21:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015309.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015309hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2rk5a1 d.145.1.4 (A:5-88) Put 7.6 88 0.0064 21.6 1.9 16 133-148 33-48 (84)
2 d2o1ra1 d.145.1.4 (A:1-78) Hyp 7.5 86 0.0063 21.4 1.8 16 133-148 33-48 (78)
3 d2euca1 a.249.1.1 (A:1-113) Hy 6.8 77 0.0056 23.4 1.2 18 77-94 72-89 (113)
4 d2p3ha1 d.145.1.4 (A:5-102) Un 6.3 1.1E+02 0.0081 22.0 1.9 16 133-148 36-51 (98)
5 d2plia1 d.145.1.4 (A:5-88) Unc 5.7 1.3E+02 0.0094 20.8 2.0 16 133-148 38-53 (84)
6 d2oara1 f.16.1.1 (A:10-118) Ga 5.7 43 0.0031 25.2 -0.9 18 356-373 1-18 (109)
7 d2r2za1 d.145.1.4 (A:5-88) Put 5.6 1.3E+02 0.0095 20.7 1.9 17 133-149 36-52 (84)
8 d2nqwa1 d.145.1.4 (A:4-90) Hyp 5.6 1.3E+02 0.0095 20.8 1.9 16 133-148 41-56 (87)
9 d2plsa1 d.145.1.4 (A:345-428) 4.3 1.1E+02 0.0078 21.2 0.6 16 133-148 38-53 (84)
10 d2p13a1 d.145.1.4 (A:431-515) 4.3 1.1E+02 0.0078 21.2 0.6 16 133-148 40-55 (85)
No 1
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=7.64 E-value=88 Score=21.57 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=14.2
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++.--+|.+|+
T Consensus 33 dTlgG~v~~~lg~iP~ 48 (84)
T d2rk5a1 33 DTIAGFYLTGVGTIPS 48 (84)
T ss_dssp CBHHHHHHHHHCSCCC
T ss_pred hhHHHHHHHHhCcCCC
Confidence 6999999999998885
No 2
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=7.52 E-value=86 Score=21.42 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=14.2
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++.--+|.+||
T Consensus 33 ~Ti~G~v~~~lg~iP~ 48 (78)
T d2o1ra1 33 RTFNGLILEHLEEIPD 48 (78)
T ss_dssp SBHHHHHHHHCSSCCC
T ss_pred hHHHHHHHHHhCcCCC
Confidence 6999999999998886
No 3
>d2euca1 a.249.1.1 (A:1-113) Hypothetical protein YfmB {Bacillus subtilis [TaxId: 1423]}
Probab=6.78 E-value=77 Score=23.41 Aligned_cols=18 Identities=22% Similarity=0.432 Sum_probs=14.8
Q ss_pred HHhhhHHHhhhHHHHHHH
Q 015309 77 VFSNKLNLLMPFGPLAIM 94 (409)
Q Consensus 77 ~~~s~~n~Ll~~vPl~i~ 94 (409)
+++||++.|+|||---+.
T Consensus 72 ~LssYL~~L~p~vT~DM~ 89 (113)
T d2euca1 72 KLSGYLSTLLPYVTADMF 89 (113)
T ss_dssp HHHHHHHHHGGGCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 689999999999865543
No 4
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=6.26 E-value=1.1e+02 Score=21.97 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=14.4
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++..-+|.+|+
T Consensus 36 ~Tl~G~~~~~lg~iP~ 51 (98)
T d2p3ha1 36 ETISGLLFDHANALLK 51 (98)
T ss_dssp CBHHHHHHHHHCSCCC
T ss_pred cCHHHHHHHHHCcCCC
Confidence 7999999999998886
No 5
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=5.70 E-value=1.3e+02 Score=20.81 Aligned_cols=16 Identities=31% Similarity=0.584 Sum_probs=14.1
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++.--+|.+|+
T Consensus 38 ~TigG~i~~~l~~iP~ 53 (84)
T d2plia1 38 DTIGGLVIQELGHLPV 53 (84)
T ss_dssp CBHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHhCcccc
Confidence 6999999999998886
No 6
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.67 E-value=43 Score=25.23 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=13.6
Q ss_pred HHhCCCcchhHHHhhHHH
Q 015309 356 AMKDKLDISLGVAIGSST 373 (409)
Q Consensus 356 A~kgk~dlAig~aiGSsi 373 (409)
||-|=+|+|+|+++|+.-
T Consensus 1 arGNVidLAVgvIiG~AF 18 (109)
T d2oara1 1 ARGNIVDLAVAVVIGTAF 18 (109)
T ss_dssp HSCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHH
Confidence 344557999999999765
No 7
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=5.60 E-value=1.3e+02 Score=20.70 Aligned_cols=17 Identities=24% Similarity=0.425 Sum_probs=14.4
Q ss_pred chhhhHHHHhhcchhHH
Q 015309 133 ATVGGLLNATFGNATEL 149 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pEL 149 (409)
+|+||++.--+|.+|+.
T Consensus 36 ~TigG~i~~~lg~iP~~ 52 (84)
T d2r2za1 36 DTMAGYLITALGTIPDE 52 (84)
T ss_dssp CBHHHHHHHHHSSCCCT
T ss_pred hhHHHHHHHHhCcCCCC
Confidence 69999998888888863
No 8
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=5.59 E-value=1.3e+02 Score=20.79 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=14.0
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++.--+|.+||
T Consensus 41 ~Ti~G~i~~~lg~iP~ 56 (87)
T d2nqwa1 41 DTLSGLFLEIKQELPH 56 (87)
T ss_dssp SBHHHHHHHHHCSCCC
T ss_pred eeHHHHHHHHhCcccc
Confidence 6999999988888886
No 9
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=4.33 E-value=1.1e+02 Score=21.15 Aligned_cols=16 Identities=19% Similarity=0.387 Sum_probs=14.0
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++.--+|.+|+
T Consensus 38 ~Tl~G~i~~~lg~iP~ 53 (84)
T d2plsa1 38 HTLSGMIMWLLGRLPQ 53 (84)
T ss_dssp CBHHHHHHHHHTSCCC
T ss_pred cCHHHHHHHHhCccCC
Confidence 4999999999998886
No 10
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=4.29 E-value=1.1e+02 Score=21.21 Aligned_cols=16 Identities=38% Similarity=0.573 Sum_probs=14.0
Q ss_pred chhhhHHHHhhcchhH
Q 015309 133 ATVGGLLNATFGNATE 148 (409)
Q Consensus 133 ~~vgGll~aa~Gn~pE 148 (409)
+|+||++.--+|.+|+
T Consensus 40 ~TlgG~i~~~lg~iP~ 55 (85)
T d2p13a1 40 STLGGYLLWQFGYIPA 55 (85)
T ss_dssp CBHHHHHHHHHSSCCC
T ss_pred eEHHHHHHHHhCcCCC
Confidence 4999999999998886
Done!