Query 015310
Match_columns 409
No_of_seqs 298 out of 1917
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 10:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o7s_A DHQ-SDH PR, bifunctiona 100.0 3.3E-99 1E-103 791.9 41.3 401 8-408 2-404 (523)
2 4h3d_A 3-dehydroquinate dehydr 100.0 1.6E-61 5.4E-66 462.6 22.0 228 8-235 17-256 (258)
3 2yr1_A 3-dehydroquinate dehydr 100.0 3.5E-60 1.2E-64 453.0 25.6 227 6-233 15-253 (257)
4 3o1n_A 3-dehydroquinate dehydr 100.0 2.6E-60 8.8E-65 457.7 22.7 228 6-233 35-274 (276)
5 1sfl_A 3-dehydroquinate dehydr 100.0 4.3E-60 1.5E-64 448.0 21.8 223 9-231 2-237 (238)
6 2ocz_A 3-dehydroquinate dehydr 100.0 1.7E-58 5.9E-63 434.8 15.2 220 8-235 1-228 (231)
7 3l9c_A 3-dehydroquinate dehydr 100.0 5.3E-58 1.8E-62 436.9 15.6 220 7-233 31-257 (259)
8 2egz_A 3-dehydroquinate dehydr 100.0 4.6E-56 1.6E-60 415.2 21.7 212 12-233 2-217 (219)
9 2ox1_A 3-dehydroquinate dehydr 100.0 6.9E-54 2.4E-58 393.5 17.0 193 14-232 2-195 (196)
10 3tum_A Shikimate dehydrogenase 100.0 1.1E-48 3.7E-53 376.0 17.8 161 234-408 2-166 (269)
11 3t4e_A Quinate/shikimate dehyd 100.0 2.6E-46 8.7E-51 366.5 18.1 162 232-408 25-192 (312)
12 3fbt_A Chorismate mutase and s 100.0 6.6E-46 2.3E-50 358.7 16.5 160 235-409 2-164 (282)
13 3o8q_A Shikimate 5-dehydrogena 100.0 1.4E-45 4.9E-50 356.8 18.6 160 235-408 5-167 (281)
14 3jyo_A Quinate/shikimate dehyd 100.0 1.4E-45 4.6E-50 357.4 16.6 158 237-408 3-168 (283)
15 3pwz_A Shikimate dehydrogenase 100.0 2.9E-45 9.8E-50 353.1 17.3 155 239-408 3-161 (272)
16 3phh_A Shikimate dehydrogenase 100.0 5.4E-46 1.8E-50 356.7 11.8 153 237-408 2-158 (269)
17 3tnl_A Shikimate dehydrogenase 100.0 4.7E-45 1.6E-49 357.9 16.9 161 233-408 32-198 (315)
18 3don_A Shikimate dehydrogenase 100.0 1.8E-45 6.2E-50 355.1 13.7 154 240-408 2-158 (277)
19 1p77_A Shikimate 5-dehydrogena 100.0 3.9E-43 1.3E-47 338.5 17.1 156 239-408 2-159 (272)
20 1npy_A Hypothetical shikimate 100.0 1.9E-43 6.4E-48 340.4 14.6 157 234-408 2-160 (271)
21 3u62_A Shikimate dehydrogenase 100.0 6.2E-43 2.1E-47 333.6 12.6 145 240-408 2-149 (253)
22 1nyt_A Shikimate 5-dehydrogena 100.0 5.5E-42 1.9E-46 330.2 17.4 156 239-408 2-159 (271)
23 2egg_A AROE, shikimate 5-dehyd 100.0 6.6E-41 2.3E-45 326.9 17.0 167 228-408 13-182 (297)
24 1nvt_A Shikimate 5'-dehydrogen 100.0 1.7E-39 5.9E-44 315.2 15.7 159 234-408 7-167 (287)
25 2hk9_A Shikimate dehydrogenase 100.0 2.5E-38 8.6E-43 305.3 15.5 161 233-408 7-169 (275)
26 2d5c_A AROE, shikimate 5-dehyd 100.0 6.9E-35 2.4E-39 279.1 15.9 154 238-408 1-156 (263)
27 1lu9_A Methylene tetrahydromet 99.9 1.8E-26 6.3E-31 223.3 3.8 147 246-408 2-160 (287)
28 2dvm_A Malic enzyme, 439AA lon 99.9 2.6E-25 8.9E-30 225.9 3.2 139 234-400 69-225 (439)
29 1pjc_A Protein (L-alanine dehy 99.5 3.8E-16 1.3E-20 155.8 -1.9 132 247-407 69-206 (361)
30 3l07_A Bifunctional protein fo 98.7 5.5E-09 1.9E-13 100.0 5.1 144 241-401 39-195 (285)
31 3p2o_A Bifunctional protein fo 98.7 7.9E-09 2.7E-13 98.9 5.3 147 241-404 38-197 (285)
32 4a5o_A Bifunctional protein fo 98.6 1.9E-08 6.4E-13 96.3 5.3 143 241-400 40-194 (286)
33 4a26_A Putative C-1-tetrahydro 98.6 3.5E-08 1.2E-12 95.0 7.1 143 241-399 42-197 (300)
34 3vh1_A Ubiquitin-like modifier 97.8 9.9E-06 3.4E-10 84.8 4.7 70 328-400 280-360 (598)
35 1x7d_A Ornithine cyclodeaminas 97.7 1.8E-05 6.2E-10 78.2 3.8 65 329-408 105-171 (350)
36 1omo_A Alanine dehydrogenase; 97.7 2.5E-05 8.6E-10 76.2 4.1 65 329-408 101-167 (322)
37 2i99_A MU-crystallin homolog; 97.5 3.9E-05 1.3E-09 74.5 3.4 65 329-408 111-177 (312)
38 3oj0_A Glutr, glutamyl-tRNA re 97.4 8.2E-05 2.8E-09 63.4 3.4 41 368-408 21-61 (144)
39 2v82_A 2-dehydro-3-deoxy-6-pho 97.3 0.0029 9.8E-08 57.4 13.3 122 10-159 6-127 (212)
40 2axq_A Saccharopine dehydrogen 97.3 0.00017 5.9E-09 73.9 4.7 45 364-408 19-64 (467)
41 1gpj_A Glutamyl-tRNA reductase 97.2 0.00028 9.5E-09 70.9 5.7 44 365-408 164-208 (404)
42 3ic5_A Putative saccharopine d 97.2 0.00046 1.6E-08 55.6 5.8 42 367-408 4-46 (118)
43 3ngx_A Bifunctional protein fo 97.2 0.00063 2.2E-08 64.6 7.0 132 242-401 33-184 (276)
44 1edz_A 5,10-methylenetetrahydr 97.2 0.00032 1.1E-08 68.2 5.0 129 258-400 58-210 (320)
45 1tt5_B Ubiquitin-activating en 97.1 2E-05 6.7E-10 80.1 -4.6 67 314-400 6-73 (434)
46 1jw9_B Molybdopterin biosynthe 96.9 0.0004 1.4E-08 65.1 3.1 36 366-401 29-65 (249)
47 3q58_A N-acetylmannosamine-6-p 96.9 0.031 1.1E-06 51.6 15.7 118 22-159 35-155 (229)
48 2rir_A Dipicolinate synthase, 96.9 0.0015 5.1E-08 62.7 6.9 44 364-407 153-196 (300)
49 3d4o_A Dipicolinate synthase s 96.8 0.0018 6.2E-08 61.9 6.9 43 364-406 151-193 (293)
50 1leh_A Leucine dehydrogenase; 96.8 0.0035 1.2E-07 62.1 9.0 44 365-408 170-213 (364)
51 2g1u_A Hypothetical protein TM 96.8 0.0018 6.2E-08 55.6 6.0 43 366-408 17-59 (155)
52 3ond_A Adenosylhomocysteinase; 96.7 0.0031 1E-07 64.6 7.8 44 364-407 261-304 (488)
53 3e8x_A Putative NAD-dependent 96.7 0.0021 7.3E-08 58.6 6.0 44 364-407 17-61 (236)
54 3igs_A N-acetylmannosamine-6-p 96.6 0.059 2E-06 49.7 15.4 126 13-159 20-155 (232)
55 1zud_1 Adenylyltransferase THI 96.5 0.0016 5.4E-08 61.1 4.2 35 366-400 26-61 (251)
56 4fgs_A Probable dehydrogenase 96.5 0.0035 1.2E-07 59.6 6.5 43 366-408 27-70 (273)
57 3llv_A Exopolyphosphatase-rela 96.5 0.0034 1.2E-07 52.7 5.6 40 368-407 6-45 (141)
58 1vhc_A Putative KHG/KDPG aldol 96.5 0.069 2.4E-06 49.0 14.9 121 12-163 18-138 (224)
59 1wbh_A KHG/KDPG aldolase; lyas 96.4 0.083 2.8E-06 48.1 14.8 121 12-163 17-137 (214)
60 1vl8_A Gluconate 5-dehydrogena 96.4 0.005 1.7E-07 57.7 6.6 44 364-407 17-61 (267)
61 2yw3_A 4-hydroxy-2-oxoglutarat 96.4 0.068 2.3E-06 48.4 13.9 120 12-164 14-133 (207)
62 2vhw_A Alanine dehydrogenase; 96.3 0.0048 1.6E-07 61.2 6.6 43 365-407 165-207 (377)
63 2eez_A Alanine dehydrogenase; 96.3 0.0047 1.6E-07 61.0 6.6 43 365-407 163-205 (369)
64 1h1y_A D-ribulose-5-phosphate 96.3 0.051 1.8E-06 49.8 13.0 113 8-131 4-121 (228)
65 3rui_A Ubiquitin-like modifier 96.3 0.003 1E-07 61.9 4.5 36 366-401 32-68 (340)
66 3ppi_A 3-hydroxyacyl-COA dehyd 96.2 0.005 1.7E-07 57.8 5.8 45 364-408 26-71 (281)
67 3o38_A Short chain dehydrogena 96.2 0.0054 1.9E-07 57.0 5.7 44 364-407 18-63 (266)
68 3c85_A Putative glutathione-re 96.2 0.0051 1.8E-07 54.0 5.2 43 365-407 36-79 (183)
69 3r1i_A Short-chain type dehydr 96.2 0.0066 2.3E-07 57.2 6.3 44 364-407 28-72 (276)
70 1b0a_A Protein (fold bifunctio 96.1 0.0048 1.6E-07 58.9 5.0 121 258-402 55-194 (288)
71 1wa3_A 2-keto-3-deoxy-6-phosph 96.1 0.1 3.5E-06 46.6 13.8 118 11-159 10-130 (205)
72 4dll_A 2-hydroxy-3-oxopropiona 96.1 0.0071 2.4E-07 58.4 6.4 42 367-408 30-71 (320)
73 3fwz_A Inner membrane protein 96.1 0.0076 2.6E-07 50.8 5.8 40 369-408 8-47 (140)
74 4dqx_A Probable oxidoreductase 96.1 0.0079 2.7E-07 56.7 6.5 45 364-408 23-68 (277)
75 1y0e_A Putative N-acetylmannos 96.1 0.21 7.2E-06 45.1 15.9 118 21-160 21-146 (223)
76 1l7d_A Nicotinamide nucleotide 96.1 0.0055 1.9E-07 60.9 5.4 41 366-406 170-210 (384)
77 3rkr_A Short chain oxidoreduct 96.1 0.0072 2.5E-07 56.2 5.9 43 365-407 26-69 (262)
78 1ae1_A Tropinone reductase-I; 96.1 0.0091 3.1E-07 56.0 6.6 44 364-407 17-61 (273)
79 1o5i_A 3-oxoacyl-(acyl carrier 96.0 0.0098 3.3E-07 55.0 6.5 43 364-406 15-58 (249)
80 3h8v_A Ubiquitin-like modifier 96.0 0.0045 1.5E-07 59.4 4.3 36 366-401 34-70 (292)
81 3ajx_A 3-hexulose-6-phosphate 96.0 0.057 1.9E-06 48.3 11.4 131 12-160 2-134 (207)
82 3tjr_A Short chain dehydrogena 96.0 0.0094 3.2E-07 56.9 6.5 43 365-407 28-71 (301)
83 4dry_A 3-oxoacyl-[acyl-carrier 96.0 0.006 2E-07 57.7 5.1 44 365-408 30-74 (281)
84 2vns_A Metalloreductase steap3 96.0 0.0071 2.4E-07 55.0 5.4 42 367-408 27-68 (215)
85 2b4q_A Rhamnolipids biosynthes 96.0 0.0093 3.2E-07 56.2 6.4 43 365-407 26-69 (276)
86 4fc7_A Peroxisomal 2,4-dienoyl 96.0 0.009 3.1E-07 56.2 6.2 43 365-407 24-67 (277)
87 3gvc_A Oxidoreductase, probabl 96.0 0.0066 2.3E-07 57.3 5.3 44 365-408 26-70 (277)
88 3f4w_A Putative hexulose 6 pho 96.0 0.045 1.5E-06 49.2 10.7 130 12-160 2-134 (211)
89 3dtt_A NADP oxidoreductase; st 96.0 0.0093 3.2E-07 55.3 6.2 40 364-403 15-54 (245)
90 1mxs_A KDPG aldolase; 2-keto-3 96.0 0.099 3.4E-06 48.0 13.0 120 13-163 28-147 (225)
91 1x13_A NAD(P) transhydrogenase 96.0 0.0077 2.6E-07 60.3 5.9 42 366-407 170-211 (401)
92 3grp_A 3-oxoacyl-(acyl carrier 96.0 0.0082 2.8E-07 56.3 5.8 45 364-408 23-68 (266)
93 4egf_A L-xylulose reductase; s 96.0 0.0076 2.6E-07 56.3 5.5 44 364-407 16-60 (266)
94 1vl6_A Malate oxidoreductase; 95.9 0.039 1.3E-06 54.8 10.8 112 264-404 107-233 (388)
95 1c1d_A L-phenylalanine dehydro 95.9 0.022 7.4E-07 56.1 8.9 56 339-403 154-210 (355)
96 2rhc_B Actinorhodin polyketide 95.9 0.01 3.6E-07 55.7 6.5 43 365-407 19-62 (277)
97 1xg5_A ARPG836; short chain de 95.9 0.011 3.6E-07 55.5 6.3 43 365-407 29-72 (279)
98 4ibo_A Gluconate dehydrogenase 95.9 0.0065 2.2E-07 57.1 4.8 44 364-407 22-66 (271)
99 4imr_A 3-oxoacyl-(acyl-carrier 95.9 0.0063 2.1E-07 57.4 4.7 43 365-407 30-73 (275)
100 3ftp_A 3-oxoacyl-[acyl-carrier 95.9 0.0085 2.9E-07 56.3 5.5 43 365-407 25-68 (270)
101 3rih_A Short chain dehydrogena 95.9 0.0081 2.8E-07 57.3 5.4 44 364-407 37-81 (293)
102 3v8b_A Putative dehydrogenase, 95.8 0.012 4E-07 55.7 6.4 44 365-408 25-69 (283)
103 3sju_A Keto reductase; short-c 95.8 0.011 3.8E-07 55.6 6.1 42 366-407 22-64 (279)
104 3gvp_A Adenosylhomocysteinase 95.8 0.02 6.8E-07 57.7 8.2 42 364-405 216-257 (435)
105 3cxt_A Dehydrogenase with diff 95.8 0.013 4.3E-07 55.8 6.5 43 365-407 31-74 (291)
106 1yb1_A 17-beta-hydroxysteroid 95.8 0.014 4.6E-07 54.7 6.5 44 364-407 27-71 (272)
107 1w6u_A 2,4-dienoyl-COA reducta 95.8 0.014 4.7E-07 55.2 6.5 44 364-407 22-66 (302)
108 4dyv_A Short-chain dehydrogena 95.7 0.0099 3.4E-07 55.9 5.2 44 365-408 25-69 (272)
109 1xu9_A Corticosteroid 11-beta- 95.7 0.011 3.8E-07 55.7 5.5 43 365-407 25-68 (286)
110 1xhl_A Short-chain dehydrogena 95.7 0.011 3.7E-07 56.4 5.4 43 365-407 23-66 (297)
111 1tqj_A Ribulose-phosphate 3-ep 95.6 0.16 5.5E-06 46.6 12.8 108 12-130 6-119 (230)
112 3p2y_A Alanine dehydrogenase/p 95.5 0.011 3.9E-07 58.6 5.2 42 366-407 182-223 (381)
113 1nvm_A HOA, 4-hydroxy-2-oxoval 95.5 0.58 2E-05 45.5 17.4 196 21-232 28-249 (345)
114 3n58_A Adenosylhomocysteinase; 95.5 0.032 1.1E-06 56.5 8.1 42 364-405 243-284 (464)
115 3k31_A Enoyl-(acyl-carrier-pro 95.5 0.019 6.6E-07 54.5 6.3 42 364-405 26-70 (296)
116 3jr2_A Hexulose-6-phosphate sy 95.4 0.067 2.3E-06 48.6 9.6 130 10-159 6-138 (218)
117 3v2h_A D-beta-hydroxybutyrate 95.4 0.021 7.3E-07 53.8 6.3 43 365-407 22-66 (281)
118 4e38_A Keto-hydroxyglutarate-a 95.4 0.16 5.5E-06 46.9 12.1 123 12-165 35-157 (232)
119 2x9g_A PTR1, pteridine reducta 95.3 0.012 4.1E-07 55.5 4.4 44 364-407 19-64 (288)
120 4gsl_A Ubiquitin-like modifier 95.3 0.011 3.9E-07 61.9 4.5 36 366-401 324-360 (615)
121 1pqw_A Polyketide synthase; ro 95.3 0.015 5.1E-07 51.5 4.7 41 367-407 38-79 (198)
122 4huj_A Uncharacterized protein 95.3 0.014 4.8E-07 53.1 4.6 40 369-408 24-64 (220)
123 2nx9_A Oxaloacetate decarboxyl 95.3 0.88 3E-05 46.2 18.3 209 23-232 30-256 (464)
124 1rpx_A Protein (ribulose-phosp 95.3 0.43 1.5E-05 43.3 14.6 85 11-106 11-99 (230)
125 2c07_A 3-oxoacyl-(acyl-carrier 95.3 0.02 7E-07 53.8 5.7 44 364-407 40-84 (285)
126 3iwp_A Copper homeostasis prot 95.2 0.32 1.1E-05 46.2 13.8 149 15-175 42-201 (287)
127 3ijr_A Oxidoreductase, short c 95.2 0.033 1.1E-06 52.7 7.1 40 364-403 43-83 (291)
128 3gem_A Short chain dehydrogena 95.1 0.014 4.9E-07 54.4 4.2 42 364-405 23-65 (260)
129 3h5n_A MCCB protein; ubiquitin 95.1 0.011 3.8E-07 58.2 3.6 35 367-401 117-152 (353)
130 4dmm_A 3-oxoacyl-[acyl-carrier 95.1 0.023 7.9E-07 53.2 5.6 44 364-407 24-69 (269)
131 3dfz_A SIRC, precorrin-2 dehyd 95.1 0.02 7E-07 52.6 4.9 39 364-402 27-65 (223)
132 1ja9_A 4HNR, 1,3,6,8-tetrahydr 95.1 0.024 8.2E-07 52.5 5.5 44 364-407 17-62 (274)
133 4iin_A 3-ketoacyl-acyl carrier 95.1 0.024 8.1E-07 52.9 5.5 43 364-406 25-69 (271)
134 2nwq_A Probable short-chain de 95.0 0.02 7E-07 53.7 5.0 42 365-407 19-61 (272)
135 1ub3_A Aldolase protein; schif 95.0 0.73 2.5E-05 42.0 15.2 143 20-176 16-173 (220)
136 3t7c_A Carveol dehydrogenase; 95.0 0.034 1.2E-06 52.8 6.6 37 364-400 24-61 (299)
137 2qhx_A Pteridine reductase 1; 95.0 0.023 7.8E-07 55.0 5.4 42 366-407 44-87 (328)
138 3doj_A AT3G25530, dehydrogenas 95.0 0.031 1E-06 53.6 6.2 42 367-408 20-61 (310)
139 3h9u_A Adenosylhomocysteinase; 95.0 0.048 1.6E-06 55.0 7.8 42 364-405 207-248 (436)
140 4da9_A Short-chain dehydrogena 95.0 0.036 1.2E-06 52.2 6.6 43 365-407 26-70 (280)
141 2nm0_A Probable 3-oxacyl-(acyl 94.9 0.018 6E-07 53.5 4.2 41 364-404 17-58 (253)
142 3v2g_A 3-oxoacyl-[acyl-carrier 94.9 0.035 1.2E-06 52.0 6.3 44 364-407 27-72 (271)
143 3hdj_A Probable ornithine cycl 94.9 0.023 7.9E-07 54.9 5.1 40 367-408 120-161 (313)
144 4e21_A 6-phosphogluconate dehy 94.9 0.033 1.1E-06 54.8 6.3 42 367-408 21-62 (358)
145 3ce6_A Adenosylhomocysteinase; 94.9 0.031 1.1E-06 57.4 6.1 42 365-406 271-312 (494)
146 1yxy_A Putative N-acetylmannos 94.8 0.15 5.1E-06 46.6 10.1 112 24-157 37-157 (234)
147 3rku_A Oxidoreductase YMR226C; 94.8 0.021 7.3E-07 54.1 4.5 43 366-408 31-77 (287)
148 2c2x_A Methylenetetrahydrofola 94.8 0.038 1.3E-06 52.5 6.1 122 258-403 54-196 (281)
149 1a4i_A Methylenetetrahydrofola 94.8 0.042 1.4E-06 52.7 6.4 124 258-402 57-200 (301)
150 3aoe_E Glutamate dehydrogenase 94.8 0.09 3.1E-06 52.8 9.1 60 339-407 198-268 (419)
151 3ctm_A Carbonyl reductase; alc 94.8 0.017 5.8E-07 54.0 3.6 42 365-406 31-73 (279)
152 4dio_A NAD(P) transhydrogenase 94.8 0.031 1.1E-06 55.9 5.7 42 366-407 188-229 (405)
153 2p91_A Enoyl-[acyl-carrier-pro 94.7 0.037 1.2E-06 52.0 5.9 37 366-402 19-58 (285)
154 3kvo_A Hydroxysteroid dehydrog 94.7 0.023 7.7E-07 55.6 4.5 40 364-403 41-81 (346)
155 1sny_A Sniffer CG10964-PA; alp 94.6 0.024 8.2E-07 52.4 4.2 42 364-405 17-62 (267)
156 3uxy_A Short-chain dehydrogena 94.6 0.015 5.3E-07 54.3 2.8 41 365-405 25-66 (266)
157 3grk_A Enoyl-(acyl-carrier-pro 94.5 0.051 1.7E-06 51.5 6.4 39 365-403 28-69 (293)
158 3uf0_A Short-chain dehydrogena 94.5 0.052 1.8E-06 50.9 6.4 38 364-401 27-65 (273)
159 3qlj_A Short chain dehydrogena 94.5 0.033 1.1E-06 53.5 5.0 36 365-400 24-60 (322)
160 3orf_A Dihydropteridine reduct 94.5 0.027 9.2E-07 52.0 4.2 40 365-404 19-59 (251)
161 3b0p_A TRNA-dihydrouridine syn 94.5 0.95 3.3E-05 44.1 15.5 92 12-106 59-165 (350)
162 1v3u_A Leukotriene B4 12- hydr 94.4 0.051 1.7E-06 52.3 6.2 41 367-407 145-186 (333)
163 3r3s_A Oxidoreductase; structu 94.4 0.051 1.7E-06 51.5 6.1 36 365-400 46-82 (294)
164 2gcg_A Glyoxylate reductase/hy 94.4 0.034 1.2E-06 54.0 4.9 42 364-405 151-192 (330)
165 3u5t_A 3-oxoacyl-[acyl-carrier 94.4 0.04 1.4E-06 51.5 5.2 42 366-407 25-68 (267)
166 3oec_A Carveol dehydrogenase ( 94.4 0.047 1.6E-06 52.4 5.8 36 365-400 43-79 (317)
167 2cdc_A Glucose dehydrogenase g 94.3 0.046 1.6E-06 53.5 5.7 41 366-406 179-222 (366)
168 1v8b_A Adenosylhomocysteinase; 94.3 0.052 1.8E-06 55.5 6.2 41 364-404 253-293 (479)
169 3qvo_A NMRA family protein; st 94.2 0.023 7.9E-07 51.7 3.0 41 367-407 22-64 (236)
170 1g0o_A Trihydroxynaphthalene r 94.2 0.045 1.5E-06 51.3 5.2 40 364-403 25-65 (283)
171 3nrc_A Enoyl-[acyl-carrier-pro 94.2 0.055 1.9E-06 50.7 5.7 43 365-407 23-70 (280)
172 3d64_A Adenosylhomocysteinase; 94.2 0.067 2.3E-06 54.9 6.7 41 364-404 273-313 (494)
173 2uyy_A N-PAC protein; long-cha 94.2 0.045 1.5E-06 52.3 5.2 40 369-408 31-70 (316)
174 3un1_A Probable oxidoreductase 94.2 0.026 8.8E-07 52.6 3.3 39 366-404 26-65 (260)
175 2dbq_A Glyoxylate reductase; D 94.1 0.052 1.8E-06 52.8 5.5 40 364-403 146-185 (334)
176 2raf_A Putative dinucleotide-b 94.1 0.044 1.5E-06 49.4 4.7 38 364-401 15-52 (209)
177 2ftp_A Hydroxymethylglutaryl-C 94.1 1.4 4.8E-05 41.9 15.5 194 21-231 28-263 (302)
178 3ggo_A Prephenate dehydrogenas 94.1 0.063 2.1E-06 51.7 6.0 40 368-407 33-74 (314)
179 1rjw_A ADH-HT, alcohol dehydro 94.1 0.061 2.1E-06 52.0 5.9 41 367-407 164-204 (339)
180 4b7c_A Probable oxidoreductase 94.1 0.053 1.8E-06 52.2 5.4 41 367-407 149-190 (336)
181 3inp_A D-ribulose-phosphate 3- 94.0 0.94 3.2E-05 42.1 13.7 116 9-137 26-146 (246)
182 3evt_A Phosphoglycerate dehydr 94.0 0.043 1.5E-06 53.3 4.7 41 364-404 133-173 (324)
183 4e3z_A Putative oxidoreductase 94.0 0.051 1.8E-06 50.6 5.1 41 367-407 25-67 (272)
184 2ekl_A D-3-phosphoglycerate de 94.0 0.063 2.2E-06 51.7 5.8 41 364-404 138-178 (313)
185 2gn4_A FLAA1 protein, UDP-GLCN 94.0 0.069 2.4E-06 51.7 6.1 43 365-407 18-63 (344)
186 2a9f_A Putative malic enzyme ( 93.9 0.27 9.4E-06 48.8 10.3 112 264-400 103-221 (398)
187 2j3h_A NADP-dependent oxidored 93.9 0.061 2.1E-06 51.9 5.5 41 367-407 155-196 (345)
188 4iiu_A 3-oxoacyl-[acyl-carrier 93.9 0.058 2E-06 50.1 5.1 43 365-407 23-67 (267)
189 1tqx_A D-ribulose-5-phosphate 93.9 0.42 1.4E-05 43.8 10.9 67 8-74 3-74 (227)
190 2hcy_A Alcohol dehydrogenase 1 93.9 0.069 2.4E-06 51.7 5.9 40 367-406 169-209 (347)
191 3lmz_A Putative sugar isomeras 93.8 0.95 3.2E-05 41.3 13.4 113 9-132 16-135 (257)
192 4aj2_A L-lactate dehydrogenase 93.8 0.069 2.4E-06 52.0 5.7 43 366-408 17-61 (331)
193 2cuk_A Glycerate dehydrogenase 93.8 0.058 2E-06 52.0 5.1 40 364-403 140-179 (311)
194 2pzm_A Putative nucleotide sug 93.8 0.051 1.7E-06 52.0 4.7 39 364-402 16-55 (330)
195 1yqd_A Sinapyl alcohol dehydro 93.8 0.084 2.9E-06 51.6 6.3 41 367-407 187-227 (366)
196 1y8q_A Ubiquitin-like 1 activa 93.8 0.034 1.2E-06 54.5 3.5 34 366-399 34-68 (346)
197 3k96_A Glycerol-3-phosphate de 93.7 0.071 2.4E-06 52.3 5.6 41 368-408 29-69 (356)
198 1wwk_A Phosphoglycerate dehydr 93.7 0.07 2.4E-06 51.3 5.4 40 364-403 138-177 (307)
199 1twd_A Copper homeostasis prot 93.7 1.5 5.3E-05 40.8 14.3 145 18-176 7-164 (256)
200 2w2k_A D-mandelate dehydrogena 93.6 0.071 2.4E-06 52.2 5.5 41 364-404 159-200 (348)
201 3s2e_A Zinc-containing alcohol 93.6 0.089 3E-06 50.7 6.1 41 367-407 166-206 (340)
202 1yb5_A Quinone oxidoreductase; 93.6 0.092 3.1E-06 51.1 6.2 40 367-406 170-210 (351)
203 3aog_A Glutamate dehydrogenase 93.5 0.22 7.5E-06 50.2 8.9 52 339-399 215-267 (440)
204 3ba1_A HPPR, hydroxyphenylpyru 93.5 0.054 1.9E-06 52.8 4.4 40 364-403 160-199 (333)
205 3ctl_A D-allulose-6-phosphate 93.5 0.73 2.5E-05 42.3 11.8 111 12-137 2-118 (231)
206 2d0i_A Dehydrogenase; structur 93.4 0.064 2.2E-06 52.2 4.8 40 364-403 142-181 (333)
207 1e3j_A NADP(H)-dependent ketos 93.4 0.11 3.6E-06 50.5 6.4 40 367-406 168-207 (352)
208 3gk3_A Acetoacetyl-COA reducta 93.4 0.078 2.7E-06 49.3 5.2 42 365-406 22-65 (269)
209 1xi3_A Thiamine phosphate pyro 93.4 0.92 3.2E-05 40.2 12.2 119 10-160 14-135 (215)
210 3uog_A Alcohol dehydrogenase; 93.4 0.11 3.6E-06 50.8 6.3 41 367-407 189-229 (363)
211 2dq4_A L-threonine 3-dehydroge 93.4 0.089 3E-06 50.9 5.7 41 367-407 164-205 (343)
212 1iz0_A Quinone oxidoreductase; 93.4 0.072 2.5E-06 50.5 4.9 40 367-406 125-165 (302)
213 2d8a_A PH0655, probable L-thre 93.4 0.086 2.9E-06 51.1 5.6 41 367-407 167-208 (348)
214 1j4a_A D-LDH, D-lactate dehydr 93.3 0.069 2.4E-06 51.9 4.8 40 364-403 142-181 (333)
215 1yx1_A Hypothetical protein PA 93.3 0.64 2.2E-05 42.7 11.3 129 29-162 29-163 (264)
216 1qor_A Quinone oxidoreductase; 93.3 0.072 2.5E-06 51.0 4.8 41 367-407 140-181 (327)
217 3two_A Mannitol dehydrogenase; 93.2 0.09 3.1E-06 50.9 5.5 41 367-407 176-216 (348)
218 2zb4_A Prostaglandin reductase 93.2 0.093 3.2E-06 51.0 5.6 41 367-407 158-202 (357)
219 1xdw_A NAD+-dependent (R)-2-hy 93.2 0.064 2.2E-06 52.1 4.3 40 364-403 142-181 (331)
220 1rd5_A Tryptophan synthase alp 93.2 2.3 7.8E-05 39.3 14.9 62 9-70 16-100 (262)
221 3pp8_A Glyoxylate/hydroxypyruv 93.2 0.059 2E-06 52.1 4.0 40 364-403 135-174 (315)
222 1wly_A CAAR, 2-haloacrylate re 93.1 0.081 2.8E-06 50.9 5.0 41 367-407 145-186 (333)
223 3gdg_A Probable NADP-dependent 93.1 0.055 1.9E-06 50.0 3.7 38 365-402 17-57 (267)
224 4dgs_A Dehydrogenase; structur 93.1 0.086 2.9E-06 51.5 5.1 40 364-403 167-206 (340)
225 1gdh_A D-glycerate dehydrogena 93.1 0.093 3.2E-06 50.7 5.3 40 364-403 142-182 (320)
226 1zcj_A Peroxisomal bifunctiona 93.1 0.1 3.4E-06 53.1 5.8 39 368-406 37-75 (463)
227 3rp8_A Flavoprotein monooxygen 93.1 0.088 3E-06 51.8 5.3 35 367-401 22-56 (407)
228 2j8z_A Quinone oxidoreductase; 93.1 0.097 3.3E-06 50.9 5.5 41 367-407 162-203 (354)
229 2eih_A Alcohol dehydrogenase; 93.1 0.097 3.3E-06 50.6 5.4 41 367-407 166-207 (343)
230 1v9l_A Glutamate dehydrogenase 93.0 0.23 8E-06 49.8 8.2 52 339-399 190-242 (421)
231 3gvx_A Glycerate dehydrogenase 93.0 0.064 2.2E-06 51.3 3.9 39 365-403 119-157 (290)
232 3k6j_A Protein F01G10.3, confi 92.9 0.11 3.9E-06 52.7 5.9 37 369-405 55-91 (460)
233 1jvb_A NAD(H)-dependent alcoho 92.9 0.11 3.8E-06 50.2 5.6 41 367-407 170-212 (347)
234 1uuf_A YAHK, zinc-type alcohol 92.9 0.14 4.7E-06 50.3 6.2 40 367-406 194-233 (369)
235 4eye_A Probable oxidoreductase 92.9 0.11 3.7E-06 50.3 5.4 41 367-407 159-200 (342)
236 4e5n_A Thermostable phosphite 92.8 0.081 2.8E-06 51.4 4.5 38 364-401 141-178 (330)
237 3gg9_A D-3-phosphoglycerate de 92.8 0.13 4.5E-06 50.4 6.0 40 364-403 156-195 (352)
238 3qwb_A Probable quinone oxidor 92.8 0.11 3.9E-06 49.8 5.5 40 367-406 148-188 (334)
239 3hg7_A D-isomer specific 2-hyd 92.8 0.084 2.9E-06 51.2 4.5 40 364-403 136-175 (324)
240 1mx3_A CTBP1, C-terminal bindi 92.8 0.099 3.4E-06 51.2 5.0 38 365-402 165-202 (347)
241 3e49_A Uncharacterized protein 92.8 6.6 0.00023 37.6 17.7 160 10-190 7-203 (311)
242 1jub_A Dihydroorotate dehydrog 92.7 0.37 1.3E-05 45.9 8.9 88 10-105 94-192 (311)
243 3jyn_A Quinone oxidoreductase; 92.7 0.097 3.3E-06 50.2 4.8 41 367-407 140-181 (325)
244 1dxy_A D-2-hydroxyisocaproate 92.7 0.085 2.9E-06 51.3 4.4 40 364-403 141-180 (333)
245 2dph_A Formaldehyde dismutase; 92.7 0.13 4.5E-06 50.8 5.8 41 367-407 185-226 (398)
246 2bdq_A Copper homeostasis prot 92.6 1.5 5.2E-05 40.0 12.3 141 30-176 15-171 (224)
247 2cf5_A Atccad5, CAD, cinnamyl 92.6 0.12 4.1E-06 50.3 5.4 41 367-407 180-220 (357)
248 1piw_A Hypothetical zinc-type 92.6 0.11 3.6E-06 50.7 5.0 40 367-406 179-218 (360)
249 1pl8_A Human sorbitol dehydrog 92.6 0.16 5.6E-06 49.2 6.4 40 367-406 171-211 (356)
250 3m6i_A L-arabinitol 4-dehydrog 92.6 0.14 4.6E-06 49.9 5.7 41 367-407 179-220 (363)
251 1h2b_A Alcohol dehydrogenase; 92.6 0.13 4.5E-06 50.1 5.6 41 367-407 186-227 (359)
252 3ihm_A Styrene monooxygenase A 92.6 0.11 3.9E-06 51.8 5.3 34 368-401 22-55 (430)
253 4id9_A Short-chain dehydrogena 92.6 0.074 2.5E-06 50.9 3.8 39 364-402 15-54 (347)
254 2g76_A 3-PGDH, D-3-phosphoglyc 92.6 0.12 4.1E-06 50.3 5.3 40 364-403 161-200 (335)
255 1kol_A Formaldehyde dehydrogen 92.6 0.16 5.6E-06 50.0 6.4 40 367-406 185-225 (398)
256 1e3i_A Alcohol dehydrogenase, 92.5 0.16 5.4E-06 49.7 6.1 40 367-406 195-235 (376)
257 2pi1_A D-lactate dehydrogenase 92.5 0.12 4.1E-06 50.3 5.1 41 364-404 137-177 (334)
258 2fli_A Ribulose-phosphate 3-ep 92.5 1.4 4.9E-05 39.3 12.1 110 11-131 4-117 (220)
259 3e02_A Uncharacterized protein 92.4 6.2 0.00021 37.8 17.0 168 10-190 7-203 (311)
260 2jhf_A Alcohol dehydrogenase E 92.4 0.16 5.6E-06 49.6 6.1 41 367-407 191-232 (374)
261 2h6e_A ADH-4, D-arabinose 1-de 92.4 0.14 4.7E-06 49.5 5.4 41 367-407 170-212 (344)
262 4g2n_A D-isomer specific 2-hyd 92.4 0.13 4.5E-06 50.3 5.3 39 364-402 169-207 (345)
263 1cdo_A Alcohol dehydrogenase; 92.3 0.17 5.9E-06 49.4 6.1 40 367-406 192-232 (374)
264 3jtm_A Formate dehydrogenase, 92.3 0.12 4.2E-06 50.6 5.0 38 364-401 160-197 (351)
265 1qp8_A Formate dehydrogenase; 92.3 0.13 4.4E-06 49.3 5.0 38 365-402 121-158 (303)
266 4dup_A Quinone oxidoreductase; 92.3 0.14 4.8E-06 49.7 5.4 41 367-407 167-208 (353)
267 2izz_A Pyrroline-5-carboxylate 92.3 0.11 3.7E-06 50.0 4.6 40 368-407 22-67 (322)
268 3noy_A 4-hydroxy-3-methylbut-2 92.2 0.99 3.4E-05 44.0 11.1 158 20-194 43-217 (366)
269 2q02_A Putative cytoplasmic pr 92.1 3.2 0.00011 37.7 14.4 88 10-104 6-104 (272)
270 2tps_A Protein (thiamin phosph 92.1 2 6.7E-05 38.5 12.6 118 11-159 18-142 (227)
271 2c0c_A Zinc binding alcohol de 92.1 0.13 4.5E-06 50.1 5.0 41 367-407 163-204 (362)
272 3uko_A Alcohol dehydrogenase c 92.1 0.13 4.4E-06 50.5 4.8 40 367-406 193-233 (378)
273 1p0f_A NADP-dependent alcohol 92.1 0.15 5.3E-06 49.7 5.4 40 367-406 191-231 (373)
274 4a2c_A Galactitol-1-phosphate 92.1 0.22 7.4E-06 47.9 6.4 40 366-405 159-199 (346)
275 4ej6_A Putative zinc-binding d 92.0 0.2 6.9E-06 49.0 6.2 40 367-406 182-222 (370)
276 2j6i_A Formate dehydrogenase; 92.0 0.13 4.4E-06 50.7 4.7 39 364-402 160-199 (364)
277 3oml_A GH14720P, peroxisomal m 91.9 0.094 3.2E-06 55.2 3.9 36 364-399 15-51 (613)
278 3gms_A Putative NADPH:quinone 91.9 0.11 3.8E-06 50.1 4.2 41 367-407 144-185 (340)
279 2xdo_A TETX2 protein; tetracyc 91.9 0.15 5.1E-06 50.0 5.2 34 368-401 26-59 (398)
280 2nv1_A Pyridoxal biosynthesis 91.9 1.2 4.1E-05 42.4 11.4 114 21-160 29-152 (305)
281 1ydn_A Hydroxymethylglutaryl-C 91.9 7.2 0.00025 36.6 16.9 149 21-184 24-203 (295)
282 3tr9_A Dihydropteroate synthas 91.9 2.7 9.1E-05 40.4 13.7 145 20-183 46-231 (314)
283 2fzw_A Alcohol dehydrogenase c 91.9 0.17 5.7E-06 49.4 5.4 40 367-406 190-230 (373)
284 2vdc_G Glutamate synthase [NAD 91.8 0.1 3.6E-06 52.8 4.0 35 367-401 121-155 (456)
285 2yq5_A D-isomer specific 2-hyd 91.8 0.13 4.6E-06 50.2 4.6 40 364-403 144-183 (343)
286 3ovp_A Ribulose-phosphate 3-ep 91.8 1.7 5.8E-05 39.7 11.8 112 9-131 3-120 (228)
287 3o63_A Probable thiamine-phosp 91.8 2.1 7.2E-05 39.5 12.5 108 23-160 43-162 (243)
288 3fpc_A NADP-dependent alcohol 91.8 0.17 6E-06 48.9 5.4 40 367-406 166-206 (352)
289 3ip1_A Alcohol dehydrogenase, 91.7 0.22 7.6E-06 49.3 6.2 40 367-406 213-253 (404)
290 1tx2_A DHPS, dihydropteroate s 91.7 6.6 0.00023 37.3 16.2 155 10-183 39-233 (297)
291 1vj0_A Alcohol dehydrogenase, 91.7 0.22 7.6E-06 48.9 6.1 41 367-407 195-236 (380)
292 3itj_A Thioredoxin reductase 1 91.7 0.11 3.8E-06 49.0 3.8 34 367-400 21-54 (338)
293 3nav_A Tryptophan synthase alp 91.7 3.6 0.00012 38.6 14.2 106 15-129 26-156 (271)
294 1h5y_A HISF; histidine biosynt 91.7 0.71 2.4E-05 41.8 9.2 125 24-161 34-175 (253)
295 1f8f_A Benzyl alcohol dehydrog 91.6 0.2 6.7E-06 49.0 5.6 40 367-406 190-230 (371)
296 1xm3_A Thiazole biosynthesis p 91.6 1.7 5.7E-05 40.6 11.8 127 9-157 12-151 (264)
297 2tmg_A Protein (glutamate dehy 91.6 0.59 2E-05 46.8 9.1 52 339-399 189-242 (415)
298 1w8s_A FBP aldolase, fructose- 91.6 3.6 0.00012 38.3 14.1 126 27-158 96-229 (263)
299 3ceu_A Thiamine phosphate pyro 91.6 0.63 2.2E-05 41.8 8.6 94 27-159 17-113 (210)
300 2o4c_A Erythronate-4-phosphate 91.5 0.23 7.9E-06 49.2 6.0 40 364-403 112-151 (380)
301 4b4u_A Bifunctional protein fo 91.5 0.27 9.2E-06 47.1 6.2 125 258-400 75-212 (303)
302 4a0s_A Octenoyl-COA reductase/ 91.4 0.18 6.1E-06 50.6 5.2 41 367-407 220-261 (447)
303 1yj8_A Glycerol-3-phosphate de 91.4 0.099 3.4E-06 51.3 3.2 39 369-407 22-72 (375)
304 2nac_A NAD-dependent formate d 91.4 0.16 5.5E-06 50.6 4.7 39 364-402 187-225 (393)
305 3qsg_A NAD-binding phosphogluc 91.3 0.2 6.8E-06 47.9 5.2 40 368-407 24-66 (312)
306 3oa3_A Aldolase; structural ge 91.3 5.3 0.00018 37.8 14.9 143 20-176 71-228 (288)
307 3pid_A UDP-glucose 6-dehydroge 91.3 0.23 7.8E-06 50.1 5.8 39 369-408 37-75 (432)
308 3fbg_A Putative arginate lyase 91.3 0.26 8.8E-06 47.7 6.0 41 367-407 150-191 (346)
309 3ldh_A Lactate dehydrogenase; 91.2 0.2 6.8E-06 48.7 5.1 42 367-408 20-63 (330)
310 2iid_A L-amino-acid oxidase; f 91.2 0.22 7.4E-06 50.3 5.6 33 368-400 33-65 (498)
311 4ezb_A Uncharacterized conserv 91.2 0.22 7.4E-06 47.9 5.3 33 369-401 25-58 (317)
312 4eez_A Alcohol dehydrogenase 1 91.1 0.3 1E-05 46.9 6.3 40 367-406 163-203 (348)
313 4hy3_A Phosphoglycerate oxidor 91.1 0.22 7.5E-06 49.1 5.3 38 364-401 172-209 (365)
314 3ps9_A TRNA 5-methylaminomethy 91.0 0.2 6.9E-06 53.1 5.3 33 368-400 272-304 (676)
315 2yci_X 5-methyltetrahydrofolat 91.0 2.5 8.4E-05 39.7 12.3 141 21-177 32-190 (271)
316 1aj0_A DHPS, dihydropteroate s 90.9 7.7 0.00026 36.6 15.7 144 21-183 36-214 (282)
317 3ngj_A Deoxyribose-phosphate a 90.9 6 0.00021 36.4 14.5 142 20-175 40-196 (239)
318 3krt_A Crotonyl COA reductase; 90.8 0.23 7.7E-06 50.1 5.2 41 367-407 228-269 (456)
319 3pvc_A TRNA 5-methylaminomethy 90.7 0.21 7.1E-06 53.1 5.1 33 368-400 264-296 (689)
320 1rqb_A Transcarboxylase 5S sub 90.7 7.1 0.00024 40.3 16.4 205 25-231 49-274 (539)
321 3lab_A Putative KDPG (2-keto-3 90.7 2.3 7.7E-05 38.7 11.2 126 9-165 11-142 (217)
322 3jv7_A ADH-A; dehydrogenase, n 90.6 0.3 1E-05 47.0 5.7 41 367-407 171-212 (345)
323 3slg_A PBGP3 protein; structur 90.5 0.22 7.6E-06 48.1 4.7 43 365-407 21-65 (372)
324 2wtb_A MFP2, fatty acid multif 90.5 0.23 7.8E-06 53.4 5.2 38 369-406 313-350 (725)
325 3oet_A Erythronate-4-phosphate 90.5 0.25 8.7E-06 48.9 5.1 40 364-403 115-154 (381)
326 2bry_A NEDD9 interacting prote 90.5 0.26 9E-06 50.3 5.4 34 368-401 92-125 (497)
327 3qja_A IGPS, indole-3-glycerol 90.4 1.9 6.5E-05 40.5 10.9 111 26-160 75-189 (272)
328 2c5a_A GDP-mannose-3', 5'-epim 90.4 0.24 8.3E-06 48.2 4.9 39 365-403 26-65 (379)
329 1vhn_A Putative flavin oxidore 90.4 7.3 0.00025 37.1 15.4 86 12-105 60-160 (318)
330 3gaz_A Alcohol dehydrogenase s 90.4 0.32 1.1E-05 47.0 5.7 39 367-406 150-189 (343)
331 3nzo_A UDP-N-acetylglucosamine 90.3 0.32 1.1E-05 48.0 5.8 42 366-407 33-76 (399)
332 3v76_A Flavoprotein; structura 90.3 0.21 7.1E-06 49.9 4.4 34 369-402 28-61 (417)
333 3vnd_A TSA, tryptophan synthas 90.3 9.2 0.00031 35.7 15.5 88 9-104 16-129 (267)
334 1wdk_A Fatty oxidation complex 90.3 0.25 8.4E-06 53.1 5.2 39 368-406 314-352 (715)
335 1gtm_A Glutamate dehydrogenase 90.0 0.78 2.7E-05 46.0 8.3 52 339-399 191-244 (419)
336 1tt5_A APPBP1, amyloid protein 90.0 0.16 5.5E-06 52.6 3.3 34 367-400 31-65 (531)
337 2yfq_A Padgh, NAD-GDH, NAD-spe 89.9 0.36 1.2E-05 48.5 5.7 53 339-400 192-245 (421)
338 2q1w_A Putative nucleotide sug 89.9 0.32 1.1E-05 46.3 5.3 39 364-402 17-56 (333)
339 2yjz_A Metalloreductase steap4 89.4 0.061 2.1E-06 48.4 0.0 38 366-403 17-54 (201)
340 3ruf_A WBGU; rossmann fold, UD 89.8 0.27 9.2E-06 47.0 4.6 36 366-401 23-59 (351)
341 1rp0_A ARA6, thiazole biosynth 89.7 0.28 9.6E-06 46.0 4.6 33 369-401 40-73 (284)
342 2e1m_A L-glutamate oxidase; L- 89.7 0.34 1.2E-05 47.8 5.3 34 367-400 43-76 (376)
343 2b69_A UDP-glucuronate decarbo 89.7 0.34 1.2E-05 46.2 5.3 36 366-401 25-61 (343)
344 1eye_A DHPS 1, dihydropteroate 89.7 5.4 0.00018 37.6 13.4 173 6-198 1-220 (280)
345 2gag_B Heterotetrameric sarcos 89.6 0.23 7.7E-06 48.3 3.9 34 368-401 21-56 (405)
346 3r12_A Deoxyribose-phosphate a 89.6 9 0.00031 35.7 14.6 143 19-175 55-212 (260)
347 2q1s_A Putative nucleotide sug 89.6 0.29 1E-05 47.5 4.8 39 365-403 29-69 (377)
348 3s8m_A Enoyl-ACP reductase; ro 89.6 0.18 6.2E-06 50.6 3.2 64 332-403 30-98 (422)
349 3goh_A Alcohol dehydrogenase, 89.6 0.27 9.1E-06 46.8 4.3 39 367-406 142-180 (315)
350 2x6t_A ADP-L-glycero-D-manno-h 89.6 0.25 8.5E-06 47.5 4.2 38 366-403 44-83 (357)
351 3k92_A NAD-GDH, NAD-specific g 89.5 0.72 2.5E-05 46.2 7.5 53 339-400 201-254 (424)
352 3i3l_A Alkylhalidase CMLS; fla 89.5 0.33 1.1E-05 50.8 5.4 34 367-400 22-55 (591)
353 2b5w_A Glucose dehydrogenase; 89.5 0.32 1.1E-05 47.2 4.9 39 368-406 173-217 (357)
354 2nvu_B Maltose binding protein 89.5 0.19 6.6E-06 54.5 3.6 34 367-400 410-444 (805)
355 3nx4_A Putative oxidoreductase 89.4 0.33 1.1E-05 46.2 4.9 39 368-407 148-187 (324)
356 1sb8_A WBPP; epimerase, 4-epim 89.4 0.38 1.3E-05 46.1 5.3 36 366-401 25-61 (352)
357 1n7h_A GDP-D-mannose-4,6-dehyd 89.3 0.29 1E-05 47.4 4.5 35 369-403 29-64 (381)
358 1o66_A 3-methyl-2-oxobutanoate 89.2 8.9 0.0003 36.0 14.4 150 31-191 32-207 (275)
359 3m47_A Orotidine 5'-phosphate 89.1 5.7 0.0002 36.1 12.9 158 6-175 9-170 (228)
360 2i0z_A NAD(FAD)-utilizing dehy 89.0 0.3 1E-05 49.0 4.4 33 369-401 27-59 (447)
361 3k30_A Histamine dehydrogenase 89.0 0.29 1E-05 52.0 4.6 35 367-401 390-424 (690)
362 3u0b_A Oxidoreductase, short c 89.0 0.49 1.7E-05 47.8 6.1 37 365-401 210-247 (454)
363 2e4g_A Tryptophan halogenase; 88.9 0.39 1.3E-05 49.6 5.3 33 368-400 25-60 (550)
364 3hgj_A Chromate reductase; TIM 88.9 3.5 0.00012 40.0 12.0 79 25-106 154-260 (349)
365 2r0c_A REBC; flavin adenine di 88.9 0.31 1.1E-05 50.3 4.6 33 369-401 27-59 (549)
366 1o94_A Tmadh, trimethylamine d 88.9 0.36 1.2E-05 51.7 5.2 35 367-401 388-422 (729)
367 2pv7_A T-protein [includes: ch 88.8 0.31 1E-05 46.3 4.1 35 368-402 21-56 (298)
368 3c4n_A Uncharacterized protein 88.8 0.28 9.4E-06 48.4 4.0 32 369-400 37-70 (405)
369 2dqw_A Dihydropteroate synthas 88.8 0.47 1.6E-05 45.3 5.4 150 21-191 50-233 (294)
370 1tt7_A YHFP; alcohol dehydroge 88.8 0.26 8.8E-06 47.1 3.6 37 370-406 153-190 (330)
371 1xa0_A Putative NADPH dependen 88.8 0.26 8.9E-06 47.1 3.6 37 370-406 152-189 (328)
372 3khj_A Inosine-5-monophosphate 88.7 2.7 9.1E-05 41.2 10.9 122 9-160 45-173 (361)
373 3glc_A Aldolase LSRF; TIM barr 88.7 2.8 9.5E-05 39.9 10.7 131 21-163 71-212 (295)
374 4e4t_A Phosphoribosylaminoimid 88.6 0.45 1.6E-05 47.5 5.4 36 366-401 33-68 (419)
375 1f76_A Dihydroorotate dehydrog 88.6 3 0.0001 40.0 11.1 86 12-105 135-245 (336)
376 1ygy_A PGDH, D-3-phosphoglycer 88.5 0.49 1.7E-05 48.8 5.7 39 364-402 138-176 (529)
377 4fcc_A Glutamate dehydrogenase 88.5 1.1 3.8E-05 45.2 8.1 50 339-397 215-264 (450)
378 4at0_A 3-ketosteroid-delta4-5a 88.4 0.34 1.1E-05 49.5 4.4 33 369-401 42-74 (510)
379 2e6f_A Dihydroorotate dehydrog 88.4 0.67 2.3E-05 44.2 6.3 88 10-105 94-195 (314)
380 1z41_A YQJM, probable NADH-dep 88.4 4.1 0.00014 39.3 12.0 80 23-105 144-249 (338)
381 1vzw_A Phosphoribosyl isomeras 88.4 7.7 0.00026 35.0 13.3 146 21-186 33-196 (244)
382 2x8g_A Thioredoxin glutathione 88.3 0.96 3.3E-05 47.0 7.9 59 329-399 78-138 (598)
383 4f6c_A AUSA reductase domain p 88.3 0.33 1.1E-05 48.1 4.2 38 366-403 67-105 (427)
384 1mzh_A Deoxyribose-phosphate a 88.3 4.3 0.00015 36.8 11.4 88 11-103 54-150 (225)
385 1mzh_A Deoxyribose-phosphate a 88.3 14 0.00048 33.3 14.9 148 20-185 17-180 (225)
386 1mo9_A ORF3; nucleotide bindin 88.3 0.37 1.3E-05 49.4 4.6 34 368-401 43-76 (523)
387 1sc6_A PGDH, D-3-phosphoglycer 88.2 0.46 1.6E-05 47.4 5.1 39 364-402 141-179 (404)
388 1y0p_A Fumarate reductase flav 88.1 0.35 1.2E-05 50.1 4.4 33 369-401 127-159 (571)
389 3glc_A Aldolase LSRF; TIM barr 88.1 14 0.00046 35.1 15.1 124 25-158 127-255 (295)
390 3ics_A Coenzyme A-disulfide re 88.0 0.37 1.3E-05 50.0 4.5 35 367-401 35-71 (588)
391 3fmw_A Oxygenase; mithramycin, 87.9 0.36 1.2E-05 50.2 4.3 33 369-401 50-82 (570)
392 1qo8_A Flavocytochrome C3 fuma 87.9 0.33 1.1E-05 50.3 3.9 33 369-401 122-154 (566)
393 2bma_A Glutamate dehydrogenase 87.8 0.86 2.9E-05 46.2 6.8 52 339-399 232-284 (470)
394 3zu3_A Putative reductase YPO4 87.8 0.31 1.1E-05 48.6 3.5 64 332-403 16-84 (405)
395 3fpz_A Thiazole biosynthetic e 87.8 0.33 1.1E-05 46.2 3.7 32 369-400 66-99 (326)
396 3cu2_A Ribulose-5-phosphate 3- 87.7 2.6 8.8E-05 38.8 9.5 104 12-130 15-133 (237)
397 3k5p_A D-3-phosphoglycerate de 87.7 0.65 2.2E-05 46.5 5.8 38 364-401 152-189 (416)
398 3axb_A Putative oxidoreductase 87.6 0.3 1E-05 48.6 3.3 32 368-399 23-55 (448)
399 1geq_A Tryptophan synthase alp 87.6 16 0.00054 33.0 18.5 114 9-130 3-140 (248)
400 3urh_A Dihydrolipoyl dehydroge 87.6 0.44 1.5E-05 48.2 4.7 32 369-400 26-57 (491)
401 2zbt_A Pyridoxal biosynthesis 87.5 4.2 0.00014 38.2 11.2 109 29-160 34-152 (297)
402 3vni_A Xylose isomerase domain 87.4 2.8 9.6E-05 38.7 9.9 46 21-69 18-65 (294)
403 3ndo_A Deoxyribose-phosphate a 87.4 5.1 0.00017 36.7 11.2 147 19-176 25-187 (231)
404 4a5l_A Thioredoxin reductase; 87.3 0.45 1.5E-05 44.4 4.2 35 366-400 150-184 (314)
405 2w6r_A Imidazole glycerol phos 87.2 8.7 0.0003 35.1 13.1 146 26-186 33-206 (266)
406 3bg3_A Pyruvate carboxylase, m 87.2 34 0.0012 36.5 20.7 209 21-231 123-359 (718)
407 1w8s_A FBP aldolase, fructose- 87.2 3.4 0.00012 38.5 10.2 151 21-187 39-203 (263)
408 4hb7_A Dihydropteroate synthas 87.2 7.8 0.00027 36.3 12.5 160 21-198 28-213 (270)
409 1t2a_A GDP-mannose 4,6 dehydra 87.2 0.48 1.7E-05 45.7 4.5 34 369-402 25-59 (375)
410 3ces_A MNMG, tRNA uridine 5-ca 87.2 0.56 1.9E-05 49.7 5.2 33 369-401 29-61 (651)
411 2g0w_A LMO2234 protein; putati 87.2 4.3 0.00015 37.7 11.1 56 11-69 23-86 (296)
412 4gcm_A TRXR, thioredoxin reduc 87.1 0.46 1.6E-05 44.5 4.2 35 366-400 143-177 (312)
413 3oix_A Putative dihydroorotate 87.1 8.6 0.00029 37.3 13.3 86 9-102 128-224 (345)
414 3o0h_A Glutathione reductase; 87.1 0.52 1.8E-05 47.7 4.8 32 369-400 27-58 (484)
415 3gr7_A NADPH dehydrogenase; fl 87.0 4.1 0.00014 39.4 11.1 87 16-105 133-249 (340)
416 3iup_A Putative NADPH:quinone 87.0 0.45 1.5E-05 46.6 4.2 41 367-407 170-212 (379)
417 3nlc_A Uncharacterized protein 86.9 0.35 1.2E-05 50.2 3.5 33 369-401 108-140 (549)
418 3fr7_A Putative ketol-acid red 86.9 0.5 1.7E-05 48.3 4.5 38 366-403 51-95 (525)
419 3zwc_A Peroxisomal bifunctiona 86.9 0.66 2.3E-05 49.9 5.7 38 368-405 316-353 (742)
420 2qjg_A Putative aldolase MJ040 86.7 2.2 7.4E-05 39.6 8.6 149 22-186 44-208 (273)
421 3cmm_A Ubiquitin-activating en 86.7 0.42 1.5E-05 53.2 4.1 35 366-400 25-60 (1015)
422 2vvm_A Monoamine oxidase N; FA 86.5 0.56 1.9E-05 47.2 4.7 32 369-400 40-71 (495)
423 3dk9_A Grase, GR, glutathione 86.5 0.54 1.8E-05 47.4 4.5 34 368-401 20-53 (478)
424 4dqv_A Probable peptide synthe 86.4 0.7 2.4E-05 46.7 5.4 40 365-404 70-113 (478)
425 2z3y_A Lysine-specific histone 86.4 0.67 2.3E-05 49.0 5.4 34 367-400 106-139 (662)
426 2vn8_A Reticulon-4-interacting 86.3 0.92 3.2E-05 44.2 6.0 38 367-405 183-221 (375)
427 2zxi_A TRNA uridine 5-carboxym 86.3 0.63 2.1E-05 49.2 5.0 33 369-401 28-60 (637)
428 3cp8_A TRNA uridine 5-carboxym 86.2 0.62 2.1E-05 49.3 4.9 33 369-401 22-54 (641)
429 4eue_A Putative reductase CA_C 86.2 0.49 1.7E-05 47.4 4.0 37 366-402 58-97 (418)
430 2z6i_A Trans-2-enoyl-ACP reduc 86.1 13 0.00045 35.5 14.1 213 9-257 12-238 (332)
431 2y5s_A DHPS, dihydropteroate s 86.0 1.3 4.4E-05 42.2 6.7 140 21-179 44-216 (294)
432 4g6h_A Rotenone-insensitive NA 86.0 0.47 1.6E-05 48.6 3.8 33 368-400 42-74 (502)
433 1ps9_A 2,4-dienoyl-COA reducta 85.9 0.69 2.4E-05 48.9 5.2 33 368-400 373-405 (671)
434 2y88_A Phosphoribosyl isomeras 85.9 6.8 0.00023 35.3 11.4 146 21-186 32-199 (244)
435 3oh8_A Nucleoside-diphosphate 85.9 0.62 2.1E-05 47.6 4.7 37 368-404 147-184 (516)
436 3hdq_A UDP-galactopyranose mut 85.8 0.64 2.2E-05 46.2 4.6 33 368-400 29-61 (397)
437 4djd_D C/Fe-SP, corrinoid/iron 85.8 25 0.00086 33.7 15.7 161 8-185 51-251 (323)
438 2cw6_A Hydroxymethylglutaryl-C 85.8 14 0.00048 34.7 13.9 194 21-231 25-260 (298)
439 3r3j_A Glutamate dehydrogenase 85.8 0.92 3.1E-05 45.8 5.7 53 339-400 219-272 (456)
440 4dvj_A Putative zinc-dependent 85.7 0.8 2.7E-05 44.5 5.2 41 367-407 171-213 (363)
441 1gte_A Dihydropyrimidine dehyd 85.7 0.55 1.9E-05 52.4 4.5 33 368-400 187-220 (1025)
442 1qop_A Tryptophan synthase alp 85.7 22 0.00075 32.8 16.4 90 9-104 15-128 (268)
443 3pi7_A NADH oxidoreductase; gr 85.7 0.66 2.3E-05 44.7 4.5 39 369-407 166-205 (349)
444 3gwf_A Cyclohexanone monooxyge 85.6 0.74 2.5E-05 47.5 5.1 39 364-402 174-212 (540)
445 2zvr_A Uncharacterized protein 85.5 13 0.00044 34.1 13.4 43 24-67 42-84 (290)
446 1f6y_A 5-methyltetrahydrofolat 85.5 11 0.00036 35.1 12.6 118 20-154 22-152 (262)
447 4ap3_A Steroid monooxygenase; 85.4 0.66 2.3E-05 48.0 4.7 38 364-401 187-224 (549)
448 1vyr_A Pentaerythritol tetrani 85.4 2.7 9.1E-05 41.2 8.8 84 23-106 161-272 (364)
449 2uv9_A Fatty acid synthase alp 85.3 1.7 5.8E-05 51.1 8.3 42 364-405 648-692 (1878)
450 3uox_A Otemo; baeyer-villiger 85.3 0.71 2.4E-05 47.7 4.8 38 364-401 181-218 (545)
451 3tsm_A IGPS, indole-3-glycerol 85.3 18 0.00062 33.8 14.1 107 28-158 84-194 (272)
452 3eeg_A 2-isopropylmalate synth 85.2 10 0.00036 36.3 12.8 196 23-230 28-251 (325)
453 2r14_A Morphinone reductase; H 85.2 2.6 8.9E-05 41.5 8.6 84 23-106 166-276 (377)
454 2dkh_A 3-hydroxybenzoate hydro 85.1 0.54 1.9E-05 49.5 3.9 33 369-401 33-66 (639)
455 2rgh_A Alpha-glycerophosphate 85.1 0.66 2.3E-05 48.2 4.5 32 369-400 33-64 (571)
456 1ep3_A Dihydroorotate dehydrog 85.1 1.6 5.6E-05 41.1 7.0 84 12-104 100-195 (311)
457 3nl6_A Thiamine biosynthetic b 85.1 7.2 0.00025 40.2 12.2 145 23-198 25-191 (540)
458 3hwr_A 2-dehydropantoate 2-red 85.0 0.87 3E-05 43.5 5.0 31 367-397 18-48 (318)
459 3lot_A Uncharacterized protein 84.8 28 0.00096 33.2 16.4 149 21-190 30-205 (314)
460 4ap3_A Steroid monooxygenase; 84.7 0.74 2.5E-05 47.6 4.6 34 368-401 21-54 (549)
461 1yxm_A Pecra, peroxisomal tran 84.7 0.85 2.9E-05 42.6 4.7 39 369-407 20-58 (303)
462 1bgv_A Glutamate dehydrogenase 84.7 1.7 5.7E-05 43.9 7.0 52 339-399 210-262 (449)
463 3jsk_A Cypbp37 protein; octame 84.7 0.63 2.1E-05 45.4 3.8 33 369-401 80-114 (344)
464 4djd_C C/Fe-SP, corrinoid/iron 84.7 12 0.00039 37.7 13.0 154 8-187 89-268 (446)
465 2gmh_A Electron transfer flavo 84.6 0.54 1.8E-05 49.0 3.5 32 370-401 37-74 (584)
466 1ka9_F Imidazole glycerol phos 84.5 8.5 0.00029 34.8 11.4 161 24-198 32-215 (252)
467 2xag_A Lysine-specific histone 84.5 0.9 3.1E-05 49.7 5.4 34 367-400 277-310 (852)
468 2qf7_A Pyruvate carboxylase pr 84.5 51 0.0017 37.2 19.7 210 21-231 571-806 (1165)
469 2qjg_A Putative aldolase MJ040 84.3 10 0.00036 34.8 12.1 128 26-159 102-236 (273)
470 2et6_A (3R)-hydroxyacyl-COA de 84.3 0.67 2.3E-05 48.6 4.1 36 365-400 319-355 (604)
471 4gut_A Lysine-specific histone 84.2 0.74 2.5E-05 49.8 4.5 34 367-400 335-368 (776)
472 2y7e_A 3-keto-5-aminohexanoate 84.2 17 0.00059 34.2 13.4 137 21-189 32-180 (282)
473 2gou_A Oxidoreductase, FMN-bin 84.1 3.9 0.00013 40.0 9.3 84 23-106 161-271 (365)
474 1ydo_A HMG-COA lyase; TIM-barr 84.0 16 0.00055 34.6 13.5 142 21-178 26-197 (307)
475 3d1c_A Flavin-containing putat 84.0 1.1 3.9E-05 42.6 5.3 36 366-401 164-199 (369)
476 1gve_A Aflatoxin B1 aldehyde r 84.0 24 0.00081 33.4 14.7 175 6-192 1-197 (327)
477 2gjc_A Thiazole biosynthetic e 83.9 0.62 2.1E-05 45.1 3.4 33 369-401 66-100 (326)
478 2vp8_A Dihydropteroate synthas 83.9 7.8 0.00027 37.2 11.1 144 21-183 63-246 (318)
479 2fr1_A Erythromycin synthase, 83.8 1.1 3.7E-05 45.6 5.4 36 367-402 225-262 (486)
480 3kb6_A D-lactate dehydrogenase 83.7 1.1 3.7E-05 43.4 5.1 39 364-402 137-175 (334)
481 3gyx_A Adenylylsulfate reducta 83.6 0.68 2.3E-05 49.2 3.8 32 369-400 23-60 (662)
482 2uv8_A Fatty acid synthase sub 83.6 1.1 3.9E-05 52.6 5.9 43 364-406 671-716 (1887)
483 2ztj_A Homocitrate synthase; ( 83.6 34 0.0012 33.4 16.0 191 21-230 23-242 (382)
484 3cgb_A Pyridine nucleotide-dis 83.6 0.81 2.8E-05 46.2 4.3 33 369-401 37-71 (480)
485 3gqv_A Enoyl reductase; medium 83.5 1.5 5.2E-05 42.6 6.1 39 366-405 163-202 (371)
486 3zen_D Fatty acid synthase; tr 83.4 1.1 3.8E-05 55.3 6.0 39 365-403 2133-2173(3089)
487 4ef8_A Dihydroorotate dehydrog 83.4 3.2 0.00011 40.5 8.3 87 9-103 126-226 (354)
488 1oy0_A Ketopantoate hydroxymet 83.4 14 0.00047 34.8 12.3 149 32-191 50-225 (281)
489 3s5w_A L-ornithine 5-monooxyge 83.3 0.57 1.9E-05 46.7 3.0 32 370-401 32-68 (463)
490 1to3_A Putative aldolase YIHT; 83.3 14 0.00047 35.1 12.6 126 29-159 114-253 (304)
491 2vt3_A REX, redox-sensing tran 83.2 1.4 4.6E-05 40.1 5.2 39 368-406 85-126 (215)
492 1hyu_A AHPF, alkyl hydroperoxi 83.2 0.96 3.3E-05 46.3 4.7 32 368-399 212-243 (521)
493 1jnr_A Adenylylsulfate reducta 83.2 0.81 2.8E-05 48.3 4.2 33 369-401 23-59 (643)
494 3nv9_A Malic enzyme; rossmann 83.0 1.6 5.5E-05 44.1 6.0 37 364-400 215-254 (487)
495 3ewb_X 2-isopropylmalate synth 83.0 31 0.0011 32.4 14.9 199 21-231 25-251 (293)
496 2z5l_A Tylkr1, tylactone synth 83.0 1.2 4.1E-05 45.7 5.3 36 367-402 258-295 (511)
497 2h9a_B CO dehydrogenase/acetyl 82.9 18 0.00062 34.5 13.2 114 24-154 75-199 (310)
498 4hv4_A UDP-N-acetylmuramate--L 82.9 0.93 3.2E-05 46.3 4.4 35 367-401 21-56 (494)
499 3p6l_A Sugar phosphate isomera 82.8 7.8 0.00027 35.0 10.4 114 8-132 7-137 (262)
500 4egb_A DTDP-glucose 4,6-dehydr 82.7 0.82 2.8E-05 43.4 3.7 35 366-400 22-59 (346)
No 1
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=100.00 E-value=3.3e-99 Score=791.89 Aligned_cols=401 Identities=50% Similarity=0.861 Sum_probs=361.6
Q ss_pred CCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHH
Q 015310 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (409)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (409)
+|+|+|||||++++.+|++.+++++.+.|+|+||||+|+|++.++.+++..+++..++|+|||+|+++|||.++.++++|
T Consensus 2 ~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 81 (523)
T 2o7s_A 2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENER 81 (523)
T ss_dssp CSCCEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHH
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHH
Confidence 68999999999999999999999888899999999999999876666888888888999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015310 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (409)
Q Consensus 88 ~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~~~ 167 (409)
+++|+.++++|+||||||++.+++.++.+...+..++|+|+|||||++||++++|.+++++|+++||||+|+|+||++.+
T Consensus 82 ~~ll~~~~~~~~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~~~~~~~~~~~~gaDivKia~~a~~~~ 161 (523)
T 2o7s_A 82 RDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIA 161 (523)
T ss_dssp HHHHHHHHHHTCSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTTTCSEEEEEEECSSGG
T ss_pred HHHHHHHHHhCCCEEEEECCCchHHHHHHHHhccCCCEEEEEcccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCHH
Confidence 99999999999999999999988887777655556899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCEEEEEcCccchhhhhhcCCCCCccccccCCCC--CCCCCCCHHHHHhhhhhccccccceEEeeec
Q 015310 168 EIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGT--PVLGLPTVESLRQTYKVEHINADTKVFGLIS 245 (409)
Q Consensus 168 D~~~ll~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~--sAPGQ~~~~~l~~~~~~~~i~~~~~~~~viG 245 (409)
|+++|++++.+.+.|+|+|+||+.|++||+++++|||++||++++.+ +||||+++++++++|++.+++.++++|||||
T Consensus 162 D~~~l~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~lt~~~l~~~~~sApGQ~~~~~l~~~~~~~~~~~~~~~~~viG 241 (523)
T 2o7s_A 162 DVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241 (523)
T ss_dssp GHHHHHHHHHHCSSCEEEEEESGGGTHHHHCTTTTTCSEEECBSSTTCCSSTTCCBHHHHHHTSCGGGCCTTCEEEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEEEcCCCCchhhhhhhhcCCceeecCCCccccCCCCCCcHHHHHHHHhhhhccccceEEEEEC
Confidence 99999999988899999999999999999999999999999999866 9999999999999999999998999999999
Q ss_pred cCCcccCCHHhHHHHHHhcCCCceEeecCcccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEE
Q 015310 246 KPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIR 325 (409)
Q Consensus 246 ~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~ 325 (409)
+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|.|+|||||||++|++++|++++.|+.+||||||++
T Consensus 242 ~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~ld~~~~~A~~iGAvNti~~ 321 (523)
T 2o7s_A 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILR 321 (523)
T ss_dssp SSCTTCCHHHHHHHHHHHTTCSEEEEEEECSCHHHHHHHTCSTTEEEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred CCccCCccHHHHHHHHHHcCCCcEEEeEEcchHHHHHHHHhcCCCCEEEECCCCHHHHHHHhcccCHHHHHhCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 326 ~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
+..+|+|+|+||||.||+.+|+..+...+...........+++++++|+|+||+||+++++|.+.|++|+|+||+.++++
T Consensus 322 ~~~~gk~~g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~ 401 (523)
T 2o7s_A 322 RKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERAL 401 (523)
T ss_dssp CTTTCCEEEECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHH
T ss_pred ecCCCeEEEEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 62278999999999999999986532100000000001246788999999999999999999999999999999999998
Q ss_pred hhh
Q 015310 406 LLL 408 (409)
Q Consensus 406 ~la 408 (409)
+++
T Consensus 402 ~la 404 (523)
T 2o7s_A 402 ELA 404 (523)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 2
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=100.00 E-value=1.6e-61 Score=462.61 Aligned_cols=228 Identities=21% Similarity=0.351 Sum_probs=207.3
Q ss_pred CCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHH----HHHHhcC-CCcEEEEeccCCCCCCCCC
Q 015310 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDL----EIILTKK-PLPVLIVYRPKWAGGLYEG 82 (409)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l----~~l~~~~-~~PiI~T~R~~~eGG~~~~ 82 (409)
.++|+|||||++++.+|++++++++...|+|+||||+|+|++..+.+.+ ..+++.. ++|+|||+|+.+|||.+++
T Consensus 17 ~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~ 96 (258)
T 4h3d_A 17 EGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLI 96 (258)
T ss_dssp SSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCC
Confidence 5799999999999999999999999889999999999999987654333 4444443 8999999999999999999
Q ss_pred CHHHHHHHHHHHHHcC-CcEEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 83 DEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 83 ~~~~~~~ll~~~~~~g-~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
++++|.++++.+++.+ +||||||+..+++.+++++ .+++.++|||+|||||++||++++|.+++.+|+++||||+|||
T Consensus 97 ~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia 176 (258)
T 4h3d_A 97 SRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIA 176 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence 9999999999999998 9999999999998888887 4678999999999999999999999999999999999999999
Q ss_pred eecCCHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhcccc
Q 015310 161 FSVNDITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235 (409)
Q Consensus 161 ~~~~~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~~i~ 235 (409)
+||++.+|+++|++++.+ .+.|+|+|+||+.|++||++++.|||++||++++++|||||+++++|+++|++++.+
T Consensus 177 ~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~fGS~lTf~~~~~~sAPGQl~~~el~~~l~lL~~~ 256 (258)
T 4h3d_A 177 VMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKSVSAPGQISFKELNSVLNLLHKS 256 (258)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGGGGGGGTCHHHHCBCEEECBCC---CTTCCBHHHHHHHHHHHHHT
T ss_pred EccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChHHHHHHHHhCCceEeccCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999754 378999999999999999999999999999999999999999999999999987654
No 3
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.5e-60 Score=453.03 Aligned_cols=227 Identities=19% Similarity=0.291 Sum_probs=208.9
Q ss_pred CCCCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh----hHHHHHHhcC-CCcEEEEeccCCCCCCC
Q 015310 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG----KDLEIILTKK-PLPVLIVYRPKWAGGLY 80 (409)
Q Consensus 6 ~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~eGG~~ 80 (409)
...++|+|||||++++.+|++.+++.+...|+|+||||+|+|.+.++. +++..+++.. ++|+|||+|+.+|||.+
T Consensus 15 ~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~ 94 (257)
T 2yr1_A 15 IGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQP 94 (257)
T ss_dssp ESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCC
T ss_pred eCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCC
Confidence 447899999999999999999999998889999999999999876543 3445666666 89999999999999999
Q ss_pred -CCCHHHHHHHHHHHHHcC-CcEEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEE
Q 015310 81 -EGDEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADII 157 (409)
Q Consensus 81 -~~~~~~~~~ll~~~~~~g-~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDiv 157 (409)
+.++++|+++++.++++| +||||||++.++ .+++++ .++++++|||+|||||++||+.++|.+++++|+++||||+
T Consensus 95 ~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDiv 173 (257)
T 2yr1_A 95 IPLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIA 173 (257)
T ss_dssp CSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999 999999999887 666776 4578999999999999999999999999999999999999
Q ss_pred EEEeecCCHhHHHHHHHHhccC----CCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhcc
Q 015310 158 KLVFSVNDITEIARIFQLLSHC----QVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233 (409)
Q Consensus 158 Kia~~~~~~~D~~~ll~~~~~~----~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~~ 233 (409)
|||+||++.+|+++|++++.+. +.|+|+||||+.|++||+++++|||++||++++++|||||+++++++++|++++
T Consensus 174 Kia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~~sAPGQl~~~el~~~l~~l~ 253 (257)
T 2yr1_A 174 KVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQSSAPGQIPIDDVRTVLSILQ 253 (257)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHHHHGGGGTBCEEECBSSSCSSTTCCBHHHHHHHHHHHH
T ss_pred EEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHhCCceEecCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999998654 689999999999999999999999999999999999999999999999998764
No 4
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=100.00 E-value=2.6e-60 Score=457.66 Aligned_cols=228 Identities=23% Similarity=0.341 Sum_probs=210.4
Q ss_pred CCCCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh----hHHHHHHhcC-CCcEEEEeccCCCCCCC
Q 015310 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG----KDLEIILTKK-PLPVLIVYRPKWAGGLY 80 (409)
Q Consensus 6 ~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~R~~~eGG~~ 80 (409)
.-.++|+|||||++++.+|++.+++++...|+|+||||+|+|++.++. +++..+|+.. ++|+|||+|+++|||.+
T Consensus 35 ~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~ 114 (276)
T 3o1n_A 35 VGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQ 114 (276)
T ss_dssp ETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSB
T ss_pred eCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCC
Confidence 346799999999999999999999998768999999999999987653 3445566655 89999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcC-CcEEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEE
Q 015310 81 EGDEHKRLEALHLAEDLG-ADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIK 158 (409)
Q Consensus 81 ~~~~~~~~~ll~~~~~~g-~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivK 158 (409)
+.++++|+++|+.++++| +||||||+..+++.+++++ .++++++|||+|||||++||+.++|.+++++|+++||||+|
T Consensus 115 ~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvK 194 (276)
T 3o1n_A 115 ALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPK 194 (276)
T ss_dssp CCCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEE
Confidence 999999999999999999 9999999999988888887 45789999999999999999999999999999999999999
Q ss_pred EEeecCCHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhcc
Q 015310 159 LVFSVNDITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233 (409)
Q Consensus 159 ia~~~~~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~~ 233 (409)
||+||++.+|+++|++++.+ .++|+|+||||+.|++||+++++|||++||++++++|||||+++++|+++++.++
T Consensus 195 ia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~vTf~~l~~~sAPGQl~~~~l~~~l~~l~ 274 (276)
T 3o1n_A 195 IAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGAISVADLRTVLTILH 274 (276)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGGGTHHHHCHHHHTCCEEECBSSCCSSTTCCBHHHHHHHHHHHH
T ss_pred EEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCCchhhHHHHHHHhCCceEecCCCCCCCCCCCCHHHHHHHHHHhc
Confidence 99999999999999999764 4789999999999999999999999999999999999999999999999998764
No 5
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=100.00 E-value=4.3e-60 Score=447.98 Aligned_cols=223 Identities=20% Similarity=0.333 Sum_probs=198.9
Q ss_pred CCeeEEEeecc-CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---hhHHHHHHhcC-CCcEEEEeccCCCCCCCCCC
Q 015310 9 NTTMICAPLMA-QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGD 83 (409)
Q Consensus 9 ~~~~icv~l~~-~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~---~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~ 83 (409)
.+|+|||||++ ++.+|++.+++.+.+.|+|+||||+|+|.+.+. .+++..+++.. ++|+|||+|+.+|||.++.+
T Consensus 2 ~~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~ 81 (238)
T 1sfl_A 2 THVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFT 81 (238)
T ss_dssp -CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCC
Confidence 36899999999 999999999999888899999999999987642 12334455545 79999999999999999999
Q ss_pred HHHHHHHHHHHHHcC-CcEEEEeccC--ccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 84 EHKRLEALHLAEDLG-ADYVDFELKV--ASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 84 ~~~~~~ll~~~~~~g-~dyvDiEl~~--~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
+++|+++++.+++.+ +||||||++. +++.+++++ .+|++++|||+|||||++||+.++|.+++++|+++||||+||
T Consensus 82 ~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKi 161 (238)
T 1sfl_A 82 NDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKL 161 (238)
T ss_dssp HHHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999999999985 9999999999 877777777 456789999999999999999999999999999999999999
Q ss_pred EeecCCHhHHHHHHHHhcc----CCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhh
Q 015310 160 VFSVNDITEIARIFQLLSH----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKV 231 (409)
Q Consensus 160 a~~~~~~~D~~~ll~~~~~----~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~ 231 (409)
|+||++.+|+++|++++.+ .+.|+|+||||+.|++||+++++|||++||++++++|||||+++++++++|++
T Consensus 162 a~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~~sAPGQl~~~el~~~l~~ 237 (238)
T 1sfl_A 162 AVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTL 237 (238)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTGGGGTBCEEEEBSSCCSSTTCCBHHHHHHHHTT
T ss_pred EecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCCchHHHHHHHHhCCCeeecCCCCCCCCCCCCHHHHHHHHHh
Confidence 9999999999999999865 47899999999999999999999999999999999999999999999999874
No 6
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=100.00 E-value=1.7e-58 Score=434.81 Aligned_cols=220 Identities=17% Similarity=0.225 Sum_probs=188.2
Q ss_pred CCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhc-C-CCcEEEEeccCCCCCCCCCCHH
Q 015310 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-K-PLPVLIVYRPKWAGGLYEGDEH 85 (409)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~-~-~~PiI~T~R~~~eGG~~~~~~~ 85 (409)
.|+|+|||||++++.+|++.+++.+. .++|+||||+|+|++.+ .+.+...++. . ++|+|||+|+.+|||.++.+++
T Consensus 1 ~~~~~Icvpi~~~t~~e~~~~~~~~~-~~~D~vElRvD~l~~~~-~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~ 78 (231)
T 2ocz_A 1 SNAMRIVAPVMPRHFDEAQAIDISKY-EDVNLIEWRADFLPKDE-IVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQ 78 (231)
T ss_dssp --CCEEEEEECCSSHHHHHTCCGGGG-TTCSEEEEEGGGSCGGG-HHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHH
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHhc-cCCCEEEEEeccccccC-HHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHH
Confidence 37899999999999999999998864 48999999999998754 3345433322 3 3999999999999999999999
Q ss_pred HHHHHHHHHHHcC-CcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015310 86 KRLEALHLAEDLG-ADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (409)
Q Consensus 86 ~~~~ll~~~~~~g-~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~ 164 (409)
+|+++++.++++| +||||||++.+++.++. ++. .+|||+|||||++|| ++|.+++++|+++||||+|||+||+
T Consensus 79 ~~~~ll~~~~~~g~~d~iDvEl~~~~~~i~~---~~~-~~kvI~S~Hdf~~tp--~el~~~~~~~~~~gaDivKia~~a~ 152 (231)
T 2ocz_A 79 EYVDIIKEINAIYNPDYIDFEYFTHKSVFQE---MLD-FPNLILSYHNFEETP--ENLMEAFSEMTKLAPRVVKIAVMPQ 152 (231)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTTTGGGGGG---GTT-CSSEEEEEEESSCCC--TTHHHHHHHHHHTCCSEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCHHHHHH---hhc-CCeEEEEecCCCCCH--HHHHHHHHHHHHcCCCEEEEEeecC
Confidence 9999999999999 99999999998765443 343 499999999999999 8999999999999999999999999
Q ss_pred CHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhcccc
Q 015310 165 DITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEHIN 235 (409)
Q Consensus 165 ~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~~i~ 235 (409)
+.+|+++|++++.+ .++|+|+|+||+.|++||+++++|||++||+++++++||||++++++++++++++.+
T Consensus 153 ~~~D~l~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~~sAPGQl~~~el~~~l~~l~~~ 228 (231)
T 2ocz_A 153 SEQDVLDLMNYTRGFKTLNPEQEFATISMGKLGRLSRFAGDVIGSSWTYVSLDHVSGPGQVTLNDMKRIIEVLEMD 228 (231)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHGGGGGCHHHHTCCEEECBC------CCCBHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHhhccCCCCEEEEEcCCCchhHHHHHHHhCCceEeccCCCCCCCCCCCHHHHHHHHHHhhhh
Confidence 99999999999764 367999999999999999999999999999999999999999999999999887655
No 7
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=100.00 E-value=5.3e-58 Score=436.87 Aligned_cols=220 Identities=18% Similarity=0.263 Sum_probs=187.0
Q ss_pred CCCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHh-cCCCcEEEEeccCCCCCCCCCCHH
Q 015310 7 TKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT-KKPLPVLIVYRPKWAGGLYEGDEH 85 (409)
Q Consensus 7 ~~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~-~~~~PiI~T~R~~~eGG~~~~~~~ 85 (409)
..++|+|||||++++.+|++ ++..+...|+|+||||+|+|+..+..+...++++ ..++|+|||+|+++|||.++.+++
T Consensus 31 g~g~pkIcvpl~~~t~~e~~-~~~~~~~~gaD~VElRvD~l~~~~~~~v~~~l~~~~~~~PiI~T~Rt~~EGG~~~~~~~ 109 (259)
T 3l9c_A 31 GRGSMKIVVPVMPQNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSNE 109 (259)
T ss_dssp ---CCEEEEEECCSSHHHHH-HCCCTTCCTTCEEEEEGGGSCGGGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHH
T ss_pred CCCCcEEEEEecCCCHHHHH-HHHHhhccCCCEEEEEeccccchhHHHHHHHHHHhcCCCcEEEEEeehhhCCCCCCCHH
Confidence 35789999999999999997 5555556799999999999985432222334444 358999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015310 86 KRLEALHLAED-LGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (409)
Q Consensus 86 ~~~~ll~~~~~-~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~ 164 (409)
+|+++|+.+++ .++||||||++.+++.+++++ +..|||+|||||++||+ +|.++|++|+++||||+|||+||+
T Consensus 110 ~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~----~~~kiI~S~Hdf~~tp~--el~~~~~~~~~~GaDIvKia~~a~ 183 (259)
T 3l9c_A 110 DYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMY----DFSNLILSYHNFEETPE--NLMEVFSELTALAPRVVKIAVMPK 183 (259)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGT----TCSSEEEEEEESSCCCT--THHHHHHHHHHTCCSEEEEEECCS
T ss_pred HHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHH----hcCeEEEEeccCCCCHH--HHHHHHHHHHHcCCCEEEEEecCC
Confidence 99999999998 789999999999888777664 44599999999999998 899999999999999999999999
Q ss_pred CHhHHHHHHHHhcc-----CCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhcc
Q 015310 165 DITEIARIFQLLSH-----CQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233 (409)
Q Consensus 165 ~~~D~~~ll~~~~~-----~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~~ 233 (409)
+.+|+++|++++.+ .+.|+|+|+||+.|++||+++++|||++||++++++|||||+++++|++++++++
T Consensus 184 s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~lTf~~l~~~sAPGQl~~~el~~~l~~l~ 257 (259)
T 3l9c_A 184 NEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQESAPGQISLADMRKIKEVLD 257 (259)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTSEEEEEECTGGGHHHHHTHHHHTBSEEECBC-------CCBHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCEEEEECCCCcccHHHHHHHhCCccccccCCCCCCCCCCCHHHHHHHHHHHc
Confidence 99999999999864 3689999999999999999999999999999999999999999999999998764
No 8
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=100.00 E-value=4.6e-56 Score=415.24 Aligned_cols=212 Identities=25% Similarity=0.343 Sum_probs=186.5
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL 88 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~ 88 (409)
+|||||++++.+|++++++. .|+|+||||+|+|++.+.. +++..+++. ++|+|||+|+.+|||. ++++|+
T Consensus 2 ~icv~l~~~~~~~~~~~~~~---~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG~---~~~~~~ 74 (219)
T 2egz_A 2 LIAVPLDDTNFSENLKKAKE---KGADIVELRVDQFSDTSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGGR---EVKNRE 74 (219)
T ss_dssp EEEEEECSTTHHHHHHHHHH---HTCSEEEEEGGGCSCCCHHHHHHHHHHHHHT-TCEEEEECCCGGGTCC---CCTTHH
T ss_pred EEEEEeCCCCHHHHHHHHHH---cCCCEEEEEeccccccCHHHHHHHHHHHHhc-CCcEEEEEeehhccCC---CHHHHH
Confidence 59999999999999887765 3899999999999876542 345555554 7999999999999999 778999
Q ss_pred HHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015310 89 EALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (409)
Q Consensus 89 ~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~~~ 167 (409)
++++.++++ +||||||++.+ +..+.+. .++..++|+|+|||||++||+.++|.+++++|+++|| |+|+|+||++.+
T Consensus 75 ~ll~~~~~~-~d~iDvEl~~~-~~~~~l~~~~~~~g~kvI~S~Hdf~~tp~~~el~~~~~~~~~~ga-ivKia~~a~~~~ 151 (219)
T 2egz_A 75 ELFEELSPL-SDYTDIELSSR-GLLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYRYGG-IPKIAVKANSYE 151 (219)
T ss_dssp HHHHHHTTT-SSEEEEETTCH-HHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTS-EEEEEEECSSHH
T ss_pred HHHHHHHhc-CCEEEEEccCC-ccHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCC-EEEEEEccCCHH
Confidence 999999999 99999999984 1122333 2455779999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHhccCCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhcc
Q 015310 168 EIARIFQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVEH 233 (409)
Q Consensus 168 D~~~ll~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~~ 233 (409)
|+++|++++.+.+.|+|+||||+.|++||+++++|||++||++++++|||||++++++++++++++
T Consensus 152 D~l~ll~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~~sAPGQl~~~el~~~l~~l~ 217 (219)
T 2egz_A 152 DVARLLCISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEKAFAPGQIPLEEMVELRKKFY 217 (219)
T ss_dssp HHHHHHHHHTTSCSCBEEEEESSGGGGHHHHGGGGTBCEEECBCC---CTTCCBHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchhHHHHHHHhCCceEecCCCCCCCCCCCCHHHHHHHHHHhc
Confidence 999999999988999999999999999999999999999999999999999999999999998765
No 9
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=100.00 E-value=6.9e-54 Score=393.54 Aligned_cols=193 Identities=24% Similarity=0.331 Sum_probs=178.8
Q ss_pred EEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 015310 14 CAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (409)
Q Consensus 14 cv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (409)
+|||++++.+| +++++. +|+||||+|+|++. ++ ..++|+|||+|+++|||.++.++++|+++++.
T Consensus 2 ~vpl~~~t~~~-~~~~~~-----aD~vElRvD~l~~~--------lr-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 66 (196)
T 2ox1_A 2 KLVATLSSPEE-LELAEK-----ADVVELRIDLFDFS--------GA-RVDKEKILTCRRVSDGGKFEGDERERIEKMKR 66 (196)
T ss_dssp EEEEEECSHHH-HHHTTT-----CSEEEEETTTSCCT--------TS-CCCSEEEEECCBGGGTSSBCSCHHHHHHHHHH
T ss_pred eeeEcCCCHHH-HHHHhc-----CCEEEEEEchhhhh--------HH-hcCCcEEEEEeecccCCCCCCCHHHHHHHHHH
Confidence 79999999999 876653 89999999999864 33 56899999999999999999999999999999
Q ss_pred HHHcCC-cEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHH
Q 015310 94 AEDLGA-DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARI 172 (409)
Q Consensus 94 ~~~~g~-dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~~~D~~~l 172 (409)
++++|+ ||||||++.+++.+ ++++|+|+|||||++||++++|.++++ +++| ||+|+|+||++.+|+++|
T Consensus 67 ~~~~g~~d~iDvEl~~~~~~i-------~~~~kvI~S~Hdf~~tp~~~~l~~~~~--~~~g-DivKia~~a~~~~D~l~l 136 (196)
T 2ox1_A 67 AFDSLNPDYVDLESDLPDSAF-------DFNCRIIESYHNFIRTPDYSELKGIVE--GRRG-DLVKIATMGKSKRDVETI 136 (196)
T ss_dssp HHHHHCCSEEEEETTSCGGGC-------CCSSEEEEEEEESSCCCCHHHHHHHHH--TCCS-SEEEEEEECCSHHHHHHH
T ss_pred HHHhCCCcEEEEECCCCHhHH-------hCCCEEEEEecCCCCCcCHHHHHHHHH--HHcC-CEEEEEEcCCCHHHHHHH
Confidence 999996 99999999887642 278999999999999999999999999 8999 999999999999999999
Q ss_pred HHHhccCCCCEEEEEcCccchhhhhhcCCCCCccccccCCCCCCCCCCCHHHHHhhhhhc
Q 015310 173 FQLLSHCQVPIIAYSVGERGLVSQLLSPKFNGALVYGSLKGTPVLGLPTVESLRQTYKVE 232 (409)
Q Consensus 173 l~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~ltf~~l~~~sAPGQ~~~~~l~~~~~~~ 232 (409)
++++.+.+ |+|+||||+.|++||+++++|||++||+++++++||||+++++++++++++
T Consensus 137 l~~~~~~~-p~I~~~MG~~G~~SRi~~~~~gs~~t~~~~~~~sAPGQl~~~el~~~l~~l 195 (196)
T 2ox1_A 137 VRILTNYD-DVVAFLMGERFSFTRVLAAYLGSPFIYCYVGSPKAPGQISLDDAREIISRL 195 (196)
T ss_dssp HHHHHHCS-SEEEEEESGGGTHHHHHHHHTTCSEEEEESSSCSSTTCCBHHHHHHHHHHH
T ss_pred HHHHhhCC-CeEEEEcCCCchhHHHhHhhhCCceEeccCCCCCCCCCCCHHHHHHHHHHh
Confidence 99998776 999999999999999999999999999999999999999999999999764
No 10
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=100.00 E-value=1.1e-48 Score=375.99 Aligned_cols=161 Identities=27% Similarity=0.444 Sum_probs=149.5
Q ss_pred ccccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcC-CCCCeEEEcccchHHHHhhhhhh
Q 015310 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSS-PDFAGFSVGFPYKEAVMKFCDEV 310 (409)
Q Consensus 234 i~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~-~~~~G~nVT~P~K~~i~~~~d~~ 310 (409)
++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++. ++|+|+|||||||+++++++|++
T Consensus 2 I~g~T~l~gviG~PI~HS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~~G~nVTiP~K~~~~~~lD~l 81 (269)
T 3tum_A 2 IRGSTELVAIVGSPIAQVKSPQNFNTWFNHNNCNLAMLPIDLHEAALDSFADTLRGWQNLRGCVVTVPYKQALANRVDGL 81 (269)
T ss_dssp -CTTCEEEEEEESSCTTCCHHHHHHHHHHHTTCSEEEEEEEBCGGGHHHHHHHHHHBTTEEEEEECTTCHHHHHTTSSEE
T ss_pred cCCCceEEEEECCCcchhhhHHHHHHHHHHcCCCeEEEEeecCHhhHHHHHHHHHhccCCCeeEeccccHHHHHHHhccC
Confidence 467899999999999999999999999999999999999998 489999988865 58999999999999999999999
Q ss_pred cHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhC
Q 015310 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390 (409)
Q Consensus 311 ~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~ 390 (409)
|+.|+.+||||||++.+ ||+|+||||||.||+++|++. +.+.+++++||+||||+|||++++|.++
T Consensus 82 s~~A~~iGAVNTi~~~~-dG~l~G~NTD~~Gf~~~L~~~-------------g~~~~~~~~lilGaGGaarai~~aL~~~ 147 (269)
T 3tum_A 82 SERAAALGSINVIRRER-DGRLLGDNVDGAGFLGAAHKH-------------GFEPAGKRALVIGCGGVGSAIAYALAEA 147 (269)
T ss_dssp CHHHHHHTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CHHHHHcCceeEEEECC-CCEEEEEEcChHHHHHHHHHh-------------CCCcccCeEEEEecHHHHHHHHHHHHHh
Confidence 99999999999999873 899999999999999998753 2456789999999999999999999999
Q ss_pred CC-eEEEEeCChHHHHhhh
Q 015310 391 GA-RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 391 G~-~i~v~nR~~~ka~~la 408 (409)
|+ +|+|+|||.+|+++|+
T Consensus 148 g~~~i~i~nRt~~ra~~la 166 (269)
T 3tum_A 148 GIASITLCDPSTARMGAVC 166 (269)
T ss_dssp TCSEEEEECSCHHHHHHHH
T ss_pred CCCeEEEeCCCHHHHHHHH
Confidence 98 9999999999999886
No 11
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=100.00 E-value=2.6e-46 Score=366.46 Aligned_cols=162 Identities=30% Similarity=0.526 Sum_probs=149.2
Q ss_pred ccccccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhh
Q 015310 232 EHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309 (409)
Q Consensus 232 ~~i~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~ 309 (409)
..++..|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|+|+|||||||++|++++|+
T Consensus 25 ~~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~ 104 (312)
T 3t4e_A 25 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDE 104 (312)
T ss_dssp -----CCEEEEEEESCCTTCSHHHHHHHHHHHHTCSEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTSHHHHGGGCSE
T ss_pred cccCCCceEEEEECCCccccccHHHHHHHHHHcCCCcEEEeEecCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHhhh
Confidence 34667789999999999999999999999999999999999998 5899999999989999999999999999999999
Q ss_pred hcHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHh
Q 015310 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389 (409)
Q Consensus 310 ~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~ 389 (409)
+|+.|+.+||||||+++ +|+|+||||||.||+++|++. +.++++++++|+||||+||+++++|.+
T Consensus 105 ls~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-------------~~~l~gk~~lVlGAGGaaraia~~L~~ 169 (312)
T 3t4e_A 105 LTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-------------GFDMRGKTMVLLGAGGAATAIGAQAAI 169 (312)
T ss_dssp ECHHHHHHTCCSEEEEE--TTEEEEECHHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred cCHHHHHhCceeEEEec--CCEEEEeCCcHHHHHHHHHhc-------------CCCcCCCEEEEECcCHHHHHHHHHHHH
Confidence 99999999999999987 999999999999999998753 256789999999999999999999999
Q ss_pred CCC-eEEEEeCC---hHHHHhhh
Q 015310 390 RGA-RVVIFDID---FEQSLLLL 408 (409)
Q Consensus 390 ~G~-~i~v~nR~---~~ka~~la 408 (409)
+|+ +|+|+||+ .+|+++|+
T Consensus 170 ~G~~~v~v~nRt~~~~~~a~~la 192 (312)
T 3t4e_A 170 EGIKEIKLFNRKDDFFEKAVAFA 192 (312)
T ss_dssp TTCSEEEEEECSSTHHHHHHHHH
T ss_pred cCCCEEEEEECCCchHHHHHHHH
Confidence 999 89999999 99999875
No 12
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=6.6e-46 Score=358.70 Aligned_cols=160 Identities=29% Similarity=0.399 Sum_probs=149.9
Q ss_pred cccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcH
Q 015310 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (409)
Q Consensus 235 ~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~ 312 (409)
+.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ +++.++++.++.++|.|+|||||||+++++++|++|+
T Consensus 2 s~~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~v~~l~~~~~~G~nVTiP~K~~v~~~ld~ls~ 81 (282)
T 3fbt_A 2 SLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEISE 81 (282)
T ss_dssp -CCCEEEEEEESSCCCCHHHHHHHHHHHHHTCCEEEEEEECCGGGHHHHHHHHHHTTCCEEEECTTCTTGGGGGCSEECH
T ss_pred CCcceEEEEECCCccccchHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhcCH
Confidence 45789999999999999999999999999999999999998 5899999998889999999999999999999999999
Q ss_pred HHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC
Q 015310 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (409)
Q Consensus 313 ~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~ 392 (409)
.|+.+||||||+++ +|+|+||||||.||+++|++. +.++++++++|+|+||+||+++++|.++|+
T Consensus 82 ~A~~iGAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-------------~~~~~~k~vlvlGaGGaaraia~~L~~~G~ 146 (282)
T 3fbt_A 82 KARKIGAVNTLKFS--REGISGFNTDYIGFGKMLSKF-------------RVEIKNNICVVLGSGGAARAVLQYLKDNFA 146 (282)
T ss_dssp HHHHHTCCCEEEEC--SSCEEEECCHHHHHHHHHHHT-------------TCCCTTSEEEEECSSTTHHHHHHHHHHTTC
T ss_pred HHHHcCCcceEEee--CCEEEeeCCcHHHHHHHHHHc-------------CCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 99999999999987 899999999999999998753 246789999999999999999999999999
Q ss_pred -eEEEEeCChHHHHhhhC
Q 015310 393 -RVVIFDIDFEQSLLLLM 409 (409)
Q Consensus 393 -~i~v~nR~~~ka~~la~ 409 (409)
+|+|+|||.+|+++|+.
T Consensus 147 ~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 147 KDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp SEEEEEESCHHHHHHHCT
T ss_pred CEEEEEeCCHHHHHHHHH
Confidence 99999999999999863
No 13
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=100.00 E-value=1.4e-45 Score=356.78 Aligned_cols=160 Identities=26% Similarity=0.417 Sum_probs=147.5
Q ss_pred cccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcH
Q 015310 235 NADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (409)
Q Consensus 235 ~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~ 312 (409)
..+|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|+|+|||||||+++++++|++|+
T Consensus 5 ~~~m~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~ld~l~~ 84 (281)
T 3o8q_A 5 ASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTE 84 (281)
T ss_dssp ---CEEEEEECCSSSCCCHHHHHHHHHHHTTCCEEEEEECCCTTCHHHHHHHHHHTTCCEEEECTTSHHHHHHHCSEECH
T ss_pred cccccEEEEECCCCCccCcHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECCccHHHHHHHHhhcCH
Confidence 44578999999999999999999999999999999999998 5899999999888999999999999999999999999
Q ss_pred HHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC
Q 015310 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (409)
Q Consensus 313 ~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~ 392 (409)
.|+.+||||||++.+ +|+|+||||||.||+++|++. +.++++++++|+|+||+||+++++|.+.|+
T Consensus 85 ~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~L~~~-------------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~ 150 (281)
T 3o8q_A 85 RARLAGAVNTLKKLD-DGEILGDNTDGEGLVQDLLAQ-------------QVLLKGATILLIGAGGAARGVLKPLLDQQP 150 (281)
T ss_dssp HHHHHTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHHHHHHHHTTCC
T ss_pred HHHhhCeeeEEEEcC-CCcEEEEecHHHHHHHHHHHh-------------CCCccCCEEEEECchHHHHHHHHHHHhcCC
Confidence 999999999999752 899999999999999998642 256789999999999999999999999998
Q ss_pred -eEEEEeCChHHHHhhh
Q 015310 393 -RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 393 -~i~v~nR~~~ka~~la 408 (409)
+|+|+||+.+++++|+
T Consensus 151 ~~v~v~~R~~~~a~~la 167 (281)
T 3o8q_A 151 ASITVTNRTFAKAEQLA 167 (281)
T ss_dssp SEEEEEESSHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHH
Confidence 9999999999999875
No 14
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=100.00 E-value=1.4e-45 Score=357.38 Aligned_cols=158 Identities=28% Similarity=0.434 Sum_probs=147.8
Q ss_pred cceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecC-------cccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhh
Q 015310 237 DTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMF-------VDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDE 309 (409)
Q Consensus 237 ~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~-------~~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~ 309 (409)
+|++|||||+||+||+||.|||++|+++|+|+.|.+++ .++++++++.++.++|+|+|||||||+++++++|+
T Consensus 3 ~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~ 82 (283)
T 3jyo_A 3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE 82 (283)
T ss_dssp CCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHHTTCCEEEECTTCTTTTGGGSSE
T ss_pred CceEEEEECCCccccccHHHHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhhCCCCEEEECcccHHHHHHHhhh
Confidence 57899999999999999999999999999999999994 36899999999889999999999999999999999
Q ss_pred hcHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHh
Q 015310 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS 389 (409)
Q Consensus 310 ~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~ 389 (409)
+|+.|+.+||||||++++ +|+|+||||||.||+++|++.. .++++++++|+|+||+||+++++|.+
T Consensus 83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~~-------------~~l~~k~vlVlGaGG~g~aia~~L~~ 148 (283)
T 3jyo_A 83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEGL-------------PNAKLDSVVQVGAGGVGNAVAYALVT 148 (283)
T ss_dssp ECHHHHHHTCCCEEEECT-TSCEEEECHHHHHHHHHHHHHC-------------TTCCCSEEEEECCSHHHHHHHHHHHH
T ss_pred CCHHHHHhCcceEEEECC-CCeEEEecCCHHHHHHHHHHhC-------------cCcCCCEEEEECCcHHHHHHHHHHHH
Confidence 999999999999999873 8899999999999999997641 45789999999999999999999999
Q ss_pred CCC-eEEEEeCChHHHHhhh
Q 015310 390 RGA-RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 390 ~G~-~i~v~nR~~~ka~~la 408 (409)
.|+ +|+|+||+.+|+++|+
T Consensus 149 ~G~~~v~i~~R~~~~a~~la 168 (283)
T 3jyo_A 149 HGVQKLQVADLDTSRAQALA 168 (283)
T ss_dssp TTCSEEEEECSSHHHHHHHH
T ss_pred CCCCEEEEEECCHHHHHHHH
Confidence 999 8999999999999875
No 15
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=100.00 E-value=2.9e-45 Score=353.08 Aligned_cols=155 Identities=26% Similarity=0.391 Sum_probs=145.6
Q ss_pred eEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHHH
Q 015310 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (409)
Q Consensus 239 ~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~ 316 (409)
.+|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|+|+|||||||+++++++|++|+.|+.
T Consensus 3 ~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~ 82 (272)
T 3pwz_A 3 DRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQL 82 (272)
T ss_dssp EEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred cEEEEECCCcCCcccHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHHhhCCHHHHH
Confidence 4799999999999999999999999999999999987 58999999998899999999999999999999999999999
Q ss_pred hccceEEEEeCCCCeEEEEcCcHHHHHHH-HHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC-eE
Q 015310 317 IAAVNTIIRRPSDGKLIGYNTDCEASITA-IEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RV 394 (409)
Q Consensus 317 igAvNti~~~~~~g~l~G~NTD~~G~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~-~i 394 (409)
+||||||+++ +|+|+||||||.||+++ |++. +.++++|+++|+|+||+||+++++|.+.|+ +|
T Consensus 83 iGAvNTv~~~--~g~l~G~NTD~~G~~~~lL~~~-------------~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v 147 (272)
T 3pwz_A 83 ARAANALKFE--DGRIVAENFDGIGLLRDIEENL-------------GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSEL 147 (272)
T ss_dssp HTCCSEEEEE--TTEEEEECCHHHHHHHHHHTTS-------------CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEE
T ss_pred hCccceEEcc--CCeEEEecCCHHHHHHHHHHHc-------------CCCccCCEEEEECccHHHHHHHHHHHHcCCCEE
Confidence 9999999887 89999999999999999 7431 256789999999999999999999999998 99
Q ss_pred EEEeCChHHHHhhh
Q 015310 395 VIFDIDFEQSLLLL 408 (409)
Q Consensus 395 ~v~nR~~~ka~~la 408 (409)
+|+||+.+|+++|+
T Consensus 148 ~i~~R~~~~a~~la 161 (272)
T 3pwz_A 148 VIANRDMAKALALR 161 (272)
T ss_dssp EEECSCHHHHHHHH
T ss_pred EEEeCCHHHHHHHH
Confidence 99999999999885
No 16
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=100.00 E-value=5.4e-46 Score=356.66 Aligned_cols=153 Identities=28% Similarity=0.534 Sum_probs=144.5
Q ss_pred cceEEeeeccCCcccCCHHhHHHHH----HhcCCCceEeecCcccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcH
Q 015310 237 DTKVFGLISKPVGHSKGPILHNPTF----RHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (409)
Q Consensus 237 ~~~~~~viG~pi~hS~SP~ihn~~f----~~~gl~~~y~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~ 312 (409)
+|++|||||+||+||+||.|||++| +++|+|+.|.++++++++++++.++.++|+|+|||||||+++++++|++|+
T Consensus 2 k~~~~~viG~Pi~hS~SP~~hn~~f~~~~~~~gl~~~Y~~~~v~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~ 81 (269)
T 3phh_A 2 KLKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKG 81 (269)
T ss_dssp CEEEEEEEESSCTTCCHHHHHHHHHHHHHHHHSSEEEEEEEECCSSSCHHHHHHHTTEEEEEECTTCHHHHHHHSSEECG
T ss_pred CceEEEEECCCccccccHHHHHHHHHHHHHHcCCCCEEeeEEhhhHHHHHHHHhhCCCCEEEEccccHHHHHHHHhhcCH
Confidence 4789999999999999999999999 999999999999999999999999889999999999999999999999999
Q ss_pred HHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC
Q 015310 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (409)
Q Consensus 313 ~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~ 392 (409)
.|+.+||||||+++ +|+|+||||||.||+++|++. .+++++|+|+||+||+++++|.+.|.
T Consensus 82 ~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------------~~k~vlvlGaGGaaraia~~L~~~G~ 142 (269)
T 3phh_A 82 IALECGAVNTLVLE--NDELVGYNTDALGFYLSLKQK-----------------NYQNALILGAGGSAKALACELKKQGL 142 (269)
T ss_dssp GGGGTTCCCEEEEE--TTEEEEECCHHHHHHHHCC--------------------CCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred HHHHhCceeEEEee--CCEEEEecChHHHHHHHHHHc-----------------CCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 99999999999987 999999999999999997531 17899999999999999999999999
Q ss_pred eEEEEeCChHHHHhhh
Q 015310 393 RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 393 ~i~v~nR~~~ka~~la 408 (409)
+|+|+||+.+|+++|+
T Consensus 143 ~v~V~nRt~~ka~~la 158 (269)
T 3phh_A 143 QVSVLNRSSRGLDFFQ 158 (269)
T ss_dssp EEEEECSSCTTHHHHH
T ss_pred EEEEEeCCHHHHHHHH
Confidence 9999999999999875
No 17
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=100.00 E-value=4.7e-45 Score=357.94 Aligned_cols=161 Identities=30% Similarity=0.584 Sum_probs=151.2
Q ss_pred cccccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhh
Q 015310 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310 (409)
Q Consensus 233 ~i~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~ 310 (409)
.++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|+|+|||||||+++++++|++
T Consensus 32 ~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~l 111 (315)
T 3tnl_A 32 RITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKL 111 (315)
T ss_dssp CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCCEEEEEEECCHHHHHHHHHHHHHTTCCEEEECTTSTTTGGGGCSEE
T ss_pred hcCCcccEEEEECCCccccccHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHhc
Confidence 3567789999999999999999999999999999999999988 48999999998899999999999999999999999
Q ss_pred cHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhC
Q 015310 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390 (409)
Q Consensus 311 ~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~ 390 (409)
|+.|+.+||||||+++ +|+|+||||||.||+++|++. +.++++|+++|+|+||+||+++++|.++
T Consensus 112 s~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-------------~~~l~gk~~lVlGaGG~g~aia~~L~~~ 176 (315)
T 3tnl_A 112 SPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA-------------GHDIIGKKMTICGAGGAATAICIQAALD 176 (315)
T ss_dssp CHHHHHHTCCSEEEEE--TTEEEEECCHHHHHHHHHHHT-------------TCCCTTSEEEEECCSHHHHHHHHHHHHT
T ss_pred CHHHHHhCccceEEec--CCEEEEeCCCHHHHHHHHHHc-------------CCCccCCEEEEECCChHHHHHHHHHHHC
Confidence 9999999999999987 999999999999999998752 2567899999999999999999999999
Q ss_pred CC-eEEEEeCC---hHHHHhhh
Q 015310 391 GA-RVVIFDID---FEQSLLLL 408 (409)
Q Consensus 391 G~-~i~v~nR~---~~ka~~la 408 (409)
|+ +|+|+||+ .+++++|+
T Consensus 177 Ga~~V~i~nR~~~~~~~a~~la 198 (315)
T 3tnl_A 177 GVKEISIFNRKDDFYANAEKTV 198 (315)
T ss_dssp TCSEEEEEECSSTTHHHHHHHH
T ss_pred CCCEEEEEECCCchHHHHHHHH
Confidence 99 99999999 99999875
No 18
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=100.00 E-value=1.8e-45 Score=355.10 Aligned_cols=154 Identities=25% Similarity=0.471 Sum_probs=145.6
Q ss_pred EEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHHHh
Q 015310 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317 (409)
Q Consensus 240 ~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~i 317 (409)
+|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++.++|+|+|||||||+++++++|++|+.|+.+
T Consensus 2 ~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~i 81 (277)
T 3don_A 2 KFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSV 81 (277)
T ss_dssp EEEEEESSCTTCCHHHHHHHHHHHTTCCCEEEEEECCGGGGGGHHHHHHHTTCSEEEECTTCTTTTGGGCSEECHHHHHH
T ss_pred EEEEECCCccccccHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECcCCHHHHHHHhhhCCHHHHHh
Confidence 499999999999999999999999999999999998 589999999988999999999999999999999999999999
Q ss_pred ccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC-eEEE
Q 015310 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVI 396 (409)
Q Consensus 318 gAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v 396 (409)
||||||+++ +|+|+||||||.||+++|++. +.++++++++|+|+||+||+++++|.+.|+ +|+|
T Consensus 82 GAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-------------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 82 GAVNTVLVK--DGKWIGYNTDGIGYVNGLKQI-------------YEGIEDAYILILGAGGASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp TCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-------------STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEE
T ss_pred CceeEEEec--CCEEEEECChHHHHHHHHHHh-------------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEE
Confidence 999999998 999999999999999999763 145778999999999999999999999999 9999
Q ss_pred EeCChHHHHhhh
Q 015310 397 FDIDFEQSLLLL 408 (409)
Q Consensus 397 ~nR~~~ka~~la 408 (409)
+||+.+|+++|+
T Consensus 147 ~~R~~~~a~~la 158 (277)
T 3don_A 147 ANRTMSRFNNWS 158 (277)
T ss_dssp ECSCGGGGTTCC
T ss_pred EeCCHHHHHHHH
Confidence 999999998875
No 19
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=100.00 E-value=3.9e-43 Score=338.49 Aligned_cols=156 Identities=21% Similarity=0.340 Sum_probs=146.3
Q ss_pred eEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHHH
Q 015310 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (409)
Q Consensus 239 ~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~ 316 (409)
++|||||+||+||+||.|||++|+++|+|+.|.++++ +++.++++.+++++|.|+|||||||+++++++|++|+.|+.
T Consensus 2 ~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~~~~~~l~~~i~~~~~~~~~G~nVT~P~K~~v~~~ld~~~~~A~~ 81 (272)
T 1p77_A 2 DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKL 81 (272)
T ss_dssp EEEEEEESSCTTCCHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred cEEEEECCCcccccCHHHHHHHHHHCCcCeEEEEEEcCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHHhhcCHHHHH
Confidence 6899999999999999999999999999999999998 68999999998899999999999999999999999999999
Q ss_pred hccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEEE
Q 015310 317 IAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396 (409)
Q Consensus 317 igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v 396 (409)
+||||||++.. +|+|+||||||.||+.+|++. +.++++++++|+|+||+||+++++|.+.|.+|+|
T Consensus 82 igavNti~~~~-~g~l~g~NTD~~G~~~~L~~~-------------~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v 147 (272)
T 1p77_A 82 AEACNTLKKLD-DGKLYADNTDGIGLVTDLQRL-------------NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVL 147 (272)
T ss_dssp HTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-------------TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEE
T ss_pred hCCceEEEEcc-CCEEEEecCCHHHHHHHHHHh-------------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 99999999842 899999999999999998752 1457789999999999999999999999999999
Q ss_pred EeCChHHHHhhh
Q 015310 397 FDIDFEQSLLLL 408 (409)
Q Consensus 397 ~nR~~~ka~~la 408 (409)
+||+.+|+++|+
T Consensus 148 ~~R~~~~a~~l~ 159 (272)
T 1p77_A 148 ANRTFSKTKELA 159 (272)
T ss_dssp EESSHHHHHHHH
T ss_pred EECCHHHHHHHH
Confidence 999999998875
No 20
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=1.9e-43 Score=340.38 Aligned_cols=157 Identities=31% Similarity=0.500 Sum_probs=146.5
Q ss_pred ccccceE-EeeeccCCcccCCHHhHHHHHHhcCCCceEeecCcccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcH
Q 015310 234 INADTKV-FGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFVDDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHP 312 (409)
Q Consensus 234 i~~~~~~-~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~ 312 (409)
++..|++ |||||+| ||+||.|||++|+++|+|+.|.+++.++++++++.++..+|.|+|||||||++|++++|++++
T Consensus 2 i~~~t~~~~~viG~P--hS~SP~~hn~~~~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~~d~~~~ 79 (271)
T 1npy_A 2 INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIHP 79 (271)
T ss_dssp CCTTCEEEEEECSSC--CSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEECH
T ss_pred cCCCceEEEEEECCC--CcccHHHHHHHHHHcCCCcEEEeechhhHHHHHHHhccCCCCeEEECcCCHHHHHHHHHHhhH
Confidence 4567888 9999999 999999999999999999999999988999999999888999999999999999999999999
Q ss_pred HHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC
Q 015310 313 LAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA 392 (409)
Q Consensus 313 ~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~ 392 (409)
.|+.+||||||+++ +|+|+||||||.||..+|++. + .. .+++++|||+||+||+++++|.++|+
T Consensus 80 ~A~~iGAvNTi~~~--~g~l~g~NTD~~G~~~~l~~~----~---------~~-~~~~vlvlGaGgaarav~~~L~~~G~ 143 (271)
T 1npy_A 80 SAQAIESVNTIVND--NGFLRAYNTDYIAIVKLIEKY----H---------LN-KNAKVIVHGSGGMAKAVVAAFKNSGF 143 (271)
T ss_dssp HHHTTTCCCEEEEE--TTEEEEECHHHHHHHHHHHHT----T---------CC-TTSCEEEECSSTTHHHHHHHHHHTTC
T ss_pred HHHHhCCCCceECc--CCEEEeecCCHHHHHHHHHHh----C---------CC-CCCEEEEECCcHHHHHHHHHHHHCCC
Confidence 99999999999987 999999999999999998652 1 22 46899999999999999999999999
Q ss_pred -eEEEEeCChHHHHhhh
Q 015310 393 -RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 393 -~i~v~nR~~~ka~~la 408 (409)
+|+|+|||.+|+++|+
T Consensus 144 ~~i~v~nRt~~ka~~la 160 (271)
T 1npy_A 144 EKLKIYARNVKTGQYLA 160 (271)
T ss_dssp CCEEEECSCHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHH
Confidence 8999999999999886
No 21
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=100.00 E-value=6.2e-43 Score=333.56 Aligned_cols=145 Identities=30% Similarity=0.455 Sum_probs=136.2
Q ss_pred EEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHHHh
Q 015310 240 VFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAI 317 (409)
Q Consensus 240 ~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~i 317 (409)
+|||||+||+||+||.|||++|+++|+|+.|.++++ ++++++++.++ ++|+|+|||||||+++++++|+ |+.|+.+
T Consensus 2 ~~~viG~pi~hS~SP~~hn~~~~~~gl~~~Y~~~~v~~~~l~~~~~~~~-~~~~G~nVT~P~K~~v~~~~d~-~~~A~~i 79 (253)
T 3u62_A 2 KFCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRIL-EEYDGFNATIPHKERVMRYVEP-SEDAQRI 79 (253)
T ss_dssp EEEEEESSCTTCSHHHHHHHHHHHHTCCCEEEEEECCGGGHHHHHHHHH-HHCSEEEECTTCTTGGGGGSEE-CHHHHHH
T ss_pred EEEEECCCccccccHHHHHHHHHHcCCCCEEEeEecCHHHHHHHHHHHh-hCCCceeecCChHHHHHHHhCC-CHHHHHc
Confidence 599999999999999999999999999999999998 58999999999 9999999999999999999999 9999999
Q ss_pred ccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC-eEEE
Q 015310 318 AAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVI 396 (409)
Q Consensus 318 gAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v 396 (409)
||||||++ + +||||||.||+++|++. .+++ +++|+|+||+||+++++|.+.|+ +|+|
T Consensus 80 GAvNTi~~---~---~G~NTD~~G~~~~l~~~---------------~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v 137 (253)
T 3u62_A 80 KAVNCVFR---G---KGYNTDWVGVVKSLEGV---------------EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWV 137 (253)
T ss_dssp TCCCEEET---T---EEECCHHHHHHHHTTTC---------------CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CcceEeec---C---EEEcchHHHHHHHHHhc---------------CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEE
Confidence 99999985 3 99999999999997531 3567 89999999999999999999999 9999
Q ss_pred EeCChHHHHhhh
Q 015310 397 FDIDFEQSLLLL 408 (409)
Q Consensus 397 ~nR~~~ka~~la 408 (409)
+||+.+|+++|+
T Consensus 138 ~nR~~~ka~~la 149 (253)
T 3u62_A 138 VNRTIERAKALD 149 (253)
T ss_dssp EESCHHHHHTCC
T ss_pred EeCCHHHHHHHH
Confidence 999999999886
No 22
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=5.5e-42 Score=330.20 Aligned_cols=156 Identities=28% Similarity=0.415 Sum_probs=146.0
Q ss_pred eEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHHH
Q 015310 239 KVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQA 316 (409)
Q Consensus 239 ~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~ 316 (409)
++|||||+||+||+||.|||++|+++|+++.|.++++ +++.++++.+++++|.|+|||||||+++++++|++|+.|+.
T Consensus 2 ~~~~viG~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVT~P~K~~~~~~ld~~~~~A~~ 81 (271)
T 1nyt_A 2 ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAAL 81 (271)
T ss_dssp CSEEEEESSCTTCSHHHHHHHHHHHHTCCCCEEEEECCTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred CEEEEECCCcccccCHHHHHHHHHHCCCCcEEEEEEcCHHHHHHHHHHHHhCCCCeEEEccCCHHHHHHHHhhcCHHHHH
Confidence 5799999999999999999999999999999999998 68999999998899999999999999999999999999999
Q ss_pred hccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEEE
Q 015310 317 IAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVI 396 (409)
Q Consensus 317 igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v 396 (409)
+||||||++.. +|+|+||||||.||+.+|++. +.++++++++|+|+||+||+++++|.+.|++|+|
T Consensus 82 igavNti~~~~-~g~l~G~ntD~~G~~~~L~~~-------------~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v 147 (271)
T 1nyt_A 82 AGAVNTLMRLE-DGRLLGDNTDGVGLLSDLERL-------------SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTI 147 (271)
T ss_dssp HTCCSEEEECT-TSCEEEECCHHHHHHHHHHHH-------------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred hCCceEEEEcC-CCeEEEeCCCHHHHHHHHHhc-------------CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEE
Confidence 99999999832 899999999999999999763 1457789999999999999999999999999999
Q ss_pred EeCChHHHHhhh
Q 015310 397 FDIDFEQSLLLL 408 (409)
Q Consensus 397 ~nR~~~ka~~la 408 (409)
+||+.+++++++
T Consensus 148 ~~R~~~~~~~la 159 (271)
T 1nyt_A 148 TNRTVSRAEELA 159 (271)
T ss_dssp ECSSHHHHHHHH
T ss_pred EECCHHHHHHHH
Confidence 999999998875
No 23
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=100.00 E-value=6.6e-41 Score=326.88 Aligned_cols=167 Identities=34% Similarity=0.510 Sum_probs=150.1
Q ss_pred hhhhccccccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHh
Q 015310 228 TYKVEHINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMK 305 (409)
Q Consensus 228 ~~~~~~i~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~ 305 (409)
-|++..++..+++|||||+|++||+||.|||++|+++|+|+.|.++++ ++++++++.+++.+|.|+|||||||++|++
T Consensus 13 ~~~~~~~~~~t~~~~viG~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~~~~~~l~~~v~~l~~~~~~G~nVTiP~K~~i~~ 92 (297)
T 2egg_A 13 GENLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRALGIAGVNVTIPHKLAVIP 92 (297)
T ss_dssp -------CCCCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTCHHHHHHHHHHHTCCEEEECTTCTTTTGG
T ss_pred cccceecCCceeEEEEECCCcccccCHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCeEEECCcCHHHHHH
Confidence 366777888899999999999999999999999999999999999998 589999999988899999999999999999
Q ss_pred hhhhhcHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHH
Q 015310 306 FCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAF 385 (409)
Q Consensus 306 ~~d~~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~ 385 (409)
++|++++.|+.+||||||+++ +|+|+|+||||.||..+|++.. ..++++++++|+|+||+||++++
T Consensus 93 ~ld~~~~~A~~iGavNti~~~--~g~l~g~nTd~~G~~~~l~~~~------------~~~l~~~~vlVlGaGg~g~aia~ 158 (297)
T 2egg_A 93 FLDEVDEHARRIGAVNTIINN--DGRLVGYNTDGLGYVQALEEEM------------NITLDGKRILVIGAGGGARGIYF 158 (297)
T ss_dssp GCSEECHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHHT------------TCCCTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHhHHHHHhCCCCeEECc--CCeEeeccCCHHHHHHHHHHhC------------CCCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999987 8999999999999999997531 03567899999999999999999
Q ss_pred HHHhCCC-eEEEEeCChHHHHhhh
Q 015310 386 GAKSRGA-RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 386 aL~~~G~-~i~v~nR~~~ka~~la 408 (409)
+|.+.|+ +|+|+||+.+|+++|+
T Consensus 159 ~L~~~G~~~V~v~nR~~~ka~~la 182 (297)
T 2egg_A 159 SLLSTAAERIDMANRTVEKAERLV 182 (297)
T ss_dssp HHHTTTCSEEEEECSSHHHHHHHH
T ss_pred HHHHCCCCEEEEEeCCHHHHHHHH
Confidence 9999999 9999999999998875
No 24
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=1.7e-39 Score=315.19 Aligned_cols=159 Identities=41% Similarity=0.590 Sum_probs=148.5
Q ss_pred ccccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhc
Q 015310 234 INADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVH 311 (409)
Q Consensus 234 i~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~ 311 (409)
++..+++|||||+||+||+||.|||++|+++|+++.|.++++ +++.++++.++.++|.|+|||||||++|++++|+++
T Consensus 7 ~~~~~~~~~viG~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVtiP~k~~i~~~~d~~~ 86 (287)
T 1nvt_A 7 INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEID 86 (287)
T ss_dssp CCTTCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEEC
T ss_pred hcCCccEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHHhCCCCEEEEccCCHHHHHHHHHhcC
Confidence 455688999999999999999999999999999999999998 689999999987899999999999999999999999
Q ss_pred HHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCC
Q 015310 312 PLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRG 391 (409)
Q Consensus 312 ~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G 391 (409)
+.|+.+|||||++++ +|+|+|+|||+.||+.+|++. . .++++++++|+|+||+|++++++|.+.|
T Consensus 87 ~~a~~igavnt~~~~--~g~l~g~nTd~~G~~~~L~~~-~------------~~l~~k~vlV~GaGgiG~aia~~L~~~G 151 (287)
T 1nvt_A 87 KDAQLIGAVNTIKIE--DGKAIGYNTDGIGARMALEEE-I------------GRVKDKNIVIYGAGGAARAVAFELAKDN 151 (287)
T ss_dssp HHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-H------------CCCCSCEEEEECCSHHHHHHHHHHTSSS
T ss_pred HHHHHhCceeeEEee--CCEEEEecCCHHHHHHHHHHh-C------------CCcCCCEEEEECchHHHHHHHHHHHHCC
Confidence 999999999999987 899999999999999999763 1 4578899999999999999999999999
Q ss_pred CeEEEEeCChHHHHhhh
Q 015310 392 ARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 392 ~~i~v~nR~~~ka~~la 408 (409)
+|+|+||+.+++++++
T Consensus 152 -~V~v~~r~~~~~~~l~ 167 (287)
T 1nvt_A 152 -NIIIANRTVEKAEALA 167 (287)
T ss_dssp -EEEEECSSHHHHHHHH
T ss_pred -CEEEEECCHHHHHHHH
Confidence 9999999999988774
No 25
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=100.00 E-value=2.5e-38 Score=305.28 Aligned_cols=161 Identities=32% Similarity=0.558 Sum_probs=150.0
Q ss_pred cccccceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhh
Q 015310 233 HINADTKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEV 310 (409)
Q Consensus 233 ~i~~~~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~ 310 (409)
.++.+|++|||+|+|++||+||.|||++|+++|+++.|.++++ +++.++++.++.++|.|+|||||||+++++++|++
T Consensus 7 ~~~~~t~~~~liG~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nvtiP~k~~i~~~ld~l 86 (275)
T 2hk9_A 7 MINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYV 86 (275)
T ss_dssp CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEECCGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSEE
T ss_pred cccCCceEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHHHHh
Confidence 4567789999999999999999999999999999999999987 58999999998889999999999999999999999
Q ss_pred cHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhC
Q 015310 311 HPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR 390 (409)
Q Consensus 311 ~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~ 390 (409)
++.|+.+||||||+++ +|++.|+|||+.||+.+|++. +.++++++++|+|+|++|++++++|.+.
T Consensus 87 ~~~A~~~gavnti~~~--~g~~~g~nTd~~G~~~~l~~~-------------~~~~~~~~v~iiGaG~~g~aia~~L~~~ 151 (275)
T 2hk9_A 87 EDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKSLKSL-------------IPEVKEKSILVLGAGGASRAVIYALVKE 151 (275)
T ss_dssp CHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-------------CTTGGGSEEEEECCSHHHHHHHHHHHHH
T ss_pred hHHHHHhCCcceEEee--CCEEEeecCCHHHHHHHHHHh-------------CCCcCCCEEEEECchHHHHHHHHHHHHc
Confidence 9999999999999987 899999999999999998753 1456789999999999999999999999
Q ss_pred CCeEEEEeCChHHHHhhh
Q 015310 391 GARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 391 G~~i~v~nR~~~ka~~la 408 (409)
|++|+++||+.+++++++
T Consensus 152 g~~V~v~~r~~~~~~~l~ 169 (275)
T 2hk9_A 152 GAKVFLWNRTKEKAIKLA 169 (275)
T ss_dssp TCEEEEECSSHHHHHHHT
T ss_pred CCEEEEEECCHHHHHHHH
Confidence 999999999999998875
No 26
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=100.00 E-value=6.9e-35 Score=279.12 Aligned_cols=154 Identities=33% Similarity=0.560 Sum_probs=142.4
Q ss_pred ceEEeeeccCCcccCCHHhHHHHHHhcCCCceEeecCc--ccHHHHHHHhcCCCCCeEEEcccchHHHHhhhhhhcHHHH
Q 015310 238 TKVFGLISKPVGHSKGPILHNPTFRHVNYNGIYVPMFV--DDLKKFFSTYSSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315 (409)
Q Consensus 238 ~~~~~viG~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~--~~l~~~~~~~~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~ 315 (409)
+++|||||+||+||+||.|||++|+++|+++.|.++++ +++.++++.++.. +.|+|||+|||+++++++|++++.|+
T Consensus 1 ~~~~~~~G~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~-~~G~~vt~P~k~~i~~~~~~l~~~a~ 79 (263)
T 2d5c_A 1 MLRFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQ 79 (263)
T ss_dssp CEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGHHHHHHHHHHH-CSEEEECTTCTTGGGGGCSEECHHHH
T ss_pred CeEEEEECCCcccccCHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHhcccc-CceEEEcccCHHHHHHHHHHHhHHHH
Confidence 46899999999999999999999999999999999977 5789999888766 99999999999999999999999999
Q ss_pred HhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEE
Q 015310 316 AIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV 395 (409)
Q Consensus 316 ~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~ 395 (409)
.+|++||++++ +|++.|+|||+.|++.+|++. +.++++ +++|+|+|++|++++..|.+.|++|+
T Consensus 80 ~~gavn~i~~~--~g~~~g~ntd~~g~~~~l~~~-------------~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~ 143 (263)
T 2d5c_A 80 RIGAVNTVLQV--EGRLFGFNTDAPGFLEALKAG-------------GIPLKG-PALVLGAGGAGRAVAFALREAGLEVW 143 (263)
T ss_dssp HHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHT-------------TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred HhCCCCcEEcc--CCeEEEeCCCHHHHHHHHHHh-------------CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEE
Confidence 99999999986 899999999999999998653 145788 99999999999999999999999999
Q ss_pred EEeCChHHHHhhh
Q 015310 396 IFDIDFEQSLLLL 408 (409)
Q Consensus 396 v~nR~~~ka~~la 408 (409)
++||+.+++++++
T Consensus 144 v~~r~~~~~~~l~ 156 (263)
T 2d5c_A 144 VWNRTPQRALALA 156 (263)
T ss_dssp EECSSHHHHHHHH
T ss_pred EEECCHHHHHHHH
Confidence 9999999988764
No 27
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=99.92 E-value=1.8e-26 Score=223.28 Aligned_cols=147 Identities=15% Similarity=0.075 Sum_probs=127.1
Q ss_pred cCCcccCCHHhHHHHHH-----hcCCCceEeecCc--ccHHHHHHHh-cCCCCCeEEEcccchH-HHHhhhhhhcHHHHH
Q 015310 246 KPVGHSKGPILHNPTFR-----HVNYNGIYVPMFV--DDLKKFFSTY-SSPDFAGFSVGFPYKE-AVMKFCDEVHPLAQA 316 (409)
Q Consensus 246 ~pi~hS~SP~ihn~~f~-----~~gl~~~y~~~~~--~~l~~~~~~~-~~~~~~G~nVT~P~K~-~i~~~~d~~~~~A~~ 316 (409)
.||.||+||.|||.+|+ .+|+++.|.++++ ++++.+++.+ ...+.+|+|||.|||. ..+..++++.+.++.
T Consensus 2 ~~i~hs~sp~~h~~~~~~~~~~~~g~~~~y~~~~v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~~ 81 (287)
T 1lu9_A 2 KKLLFQFDTDATPSVFDVVVGYDGGADHITGYGNVTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVKK 81 (287)
T ss_dssp CCEEEEEESSSSCCHHHHHHHHHTTCSEEEEESSCCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHHH
T ss_pred CceEEEccCCCCCCchhhheeeccCcceEeccCCcCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHHH
Confidence 69999999999999999 4999999999988 6899999985 6778999999999976 556667777666665
Q ss_pred --hccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEe-chhHHHHHHHHHHhCCCe
Q 015310 317 --IAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAG-AGGAGRALAFGAKSRGAR 393 (409)
Q Consensus 317 --igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlG-aGGaarai~~aL~~~G~~ 393 (409)
+||+||++.. + +.|+|||+.||+.+|++.+. .++++|+++|+| +||+|++++++|.+.|++
T Consensus 82 ~~~gavnt~~~~--~--~~G~nTd~~g~~~~l~~~~~------------~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~ 145 (287)
T 1lu9_A 82 RFFGPFRVSCML--D--SNGSNTTAAAGVALVVKAAG------------GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE 145 (287)
T ss_dssp HCBTTBCCEEEE--C--STTHHHHHHHHHHHHHHHTT------------SCCTTCEEEEETCSSHHHHHHHHHHHHTTCE
T ss_pred hcCCCeEEEEec--C--CCcCCchHHHHHHHHHHhhc------------cCCCCCEEEEECCCcHHHHHHHHHHHHCcCE
Confidence 4999999876 4 47999999999999875311 346789999999 899999999999999999
Q ss_pred EEEEeCChHHHHhhh
Q 015310 394 VVIFDIDFEQSLLLL 408 (409)
Q Consensus 394 i~v~nR~~~ka~~la 408 (409)
|++++|+.+++++++
T Consensus 146 V~i~~R~~~~~~~l~ 160 (287)
T 1lu9_A 146 VVLCGRKLDKAQAAA 160 (287)
T ss_dssp EEEEESSHHHHHHHH
T ss_pred EEEEECCHHHHHHHH
Confidence 999999999988764
No 28
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=99.90 E-value=2.6e-25 Score=225.89 Aligned_cols=139 Identities=15% Similarity=0.247 Sum_probs=121.0
Q ss_pred ccccceEEe--eeccCCcccCCHHhHHHH--HHhc-CCCceEeecCcc---cHHHHHHHhcCCCCCeEEE---cccchHH
Q 015310 234 INADTKVFG--LISKPVGHSKGPILHNPT--FRHV-NYNGIYVPMFVD---DLKKFFSTYSSPDFAGFSV---GFPYKEA 302 (409)
Q Consensus 234 i~~~~~~~~--viG~pi~hS~SP~ihn~~--f~~~-gl~~~y~~~~~~---~l~~~~~~~~~~~~~G~nV---T~P~K~~ 302 (409)
++..++++| ++|+ ||.||.|||++ |+++ |+|+.|.+++++ ++.++++.++ ++|.|+|| |+|||++
T Consensus 69 vtdgt~ilGlG~iG~---hS~sPvmh~ka~lf~~~gGid~~yi~ldv~d~de~~~~v~~l~-~~f~GinvED~T~P~k~~ 144 (439)
T 2dvm_A 69 VSDGSRILGLGNIGP---LAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVKAIA-PTFGGINLEDIASPKCFY 144 (439)
T ss_dssp EECSTTBTTTBCCCH---HHHHHHHHHHHHHHHHHHCCEEEEEECSCCSHHHHHHHHHHTG-GGCSEEEECSCCTTHHHH
T ss_pred EECCCeEecccceec---cccCHHHHHHHHHHHHhCCCCCeeeeeecCCHHHHHHHHHHhC-ccCcEEEEEeCCCchHHH
Confidence 344567777 9998 99999999966 9999 899999999993 5666666666 89999999 9999999
Q ss_pred HHhhhhhhcHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHH
Q 015310 303 VMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRA 382 (409)
Q Consensus 303 i~~~~d~~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaara 382 (409)
+++++|+ ||||+++.. |+++.| |||+.||+++|+.. +.++++++++|+||||||++
T Consensus 145 il~~l~~---------avNt~vf~d-D~~gtg-ntd~aG~~~AL~~~-------------g~~l~~~rvlvlGAGgAg~a 200 (439)
T 2dvm_A 145 ILERLRE---------ELDIPVFHD-DQQGTA-AVVLAGLLNALKVV-------------GKKISEITLALFGAGAAGFA 200 (439)
T ss_dssp HHHHHHH---------HCSSCEEEH-HHHHHH-HHHHHHHHHHHHHH-------------TCCTTTCCEEEECCSHHHHH
T ss_pred HHHHHHH---------hcCEEEEeC-CCcEEe-ehHHHHHHHHHHHh-------------CCCccCCEEEEECccHHHHH
Confidence 9999986 899999862 778999 99999999999753 14577899999999999999
Q ss_pred HHHHHHhCCC---eEEEEe----CC
Q 015310 383 LAFGAKSRGA---RVVIFD----ID 400 (409)
Q Consensus 383 i~~aL~~~G~---~i~v~n----R~ 400 (409)
+++.|.++|+ +|+|+| |+
T Consensus 201 ia~~L~~~G~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 201 TLRILTEAGVKPENVRVVELVNGKP 225 (439)
T ss_dssp HHHHHHHTTCCGGGEEEEEEETTEE
T ss_pred HHHHHHHcCCCcCeEEEEEccCCCc
Confidence 9999999998 799999 98
No 29
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=99.53 E-value=3.8e-16 Score=155.78 Aligned_cols=132 Identities=17% Similarity=0.185 Sum_probs=109.3
Q ss_pred CCcccCCHHhHHHHHHhcCC-CceEeecCcccHHHHHHHhcCCCCCeEEE-cccchHHHHhhhhhhcHHHHHh----ccc
Q 015310 247 PVGHSKGPILHNPTFRHVNY-NGIYVPMFVDDLKKFFSTYSSPDFAGFSV-GFPYKEAVMKFCDEVHPLAQAI----AAV 320 (409)
Q Consensus 247 pi~hS~SP~ihn~~f~~~gl-~~~y~~~~~~~l~~~~~~~~~~~~~G~nV-T~P~K~~i~~~~d~~~~~A~~i----gAv 320 (409)
.|-+++||.+||..|.+.|+ .+.|..+.++ +.+++.++..++.|+|+ |+|||+.+++++|.+++.|..+ ||+
T Consensus 69 ~i~~vksP~~~~~~~~~~g~~~~~y~~~~~~--~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~ 146 (361)
T 1pjc_A 69 MVVKVKEPLPAEYDLMQKDQLLFTYLHLAAA--RELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGAR 146 (361)
T ss_dssp EEECSSCCCGGGGGGCCTTCEEEECCCGGGC--HHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCHHHHHhhcCCCEEEEEeccccC--HHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHH
Confidence 34478899999999999997 8899998875 24566666678999999 9999999999999999999999 999
Q ss_pred eEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 321 NTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 321 Nti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
||+... +|+ |+.. .. + ..+++++|+|+|+||+|++++..+..+|++|++++|+
T Consensus 147 nt~~~~--~g~--G~~l------~~----l-------------~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 147 FLERQQ--GGR--GVLL------GG----V-------------PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp HTSGGG--TSC--CCCT------TC----B-------------TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHhhcc--CCC--ceec------cC----C-------------CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 999765 554 3320 11 1 1245689999999999999999999999999999999
Q ss_pred hHHHHhh
Q 015310 401 FEQSLLL 407 (409)
Q Consensus 401 ~~ka~~l 407 (409)
.+|++.+
T Consensus 200 ~~r~~~~ 206 (361)
T 1pjc_A 200 VERLSYL 206 (361)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988765
No 30
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.74 E-value=5.5e-09 Score=99.97 Aligned_cols=144 Identities=11% Similarity=0.076 Sum_probs=106.0
Q ss_pred Eeeec-cCCcccCCHHhHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccch-----HHHHhhhhh
Q 015310 241 FGLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDE 309 (409)
Q Consensus 241 ~~viG-~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K-----~~i~~~~d~ 309 (409)
.-++| +|-|++-- ..-...++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++ +.++..++-
T Consensus 39 vilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p 117 (285)
T 3l07_A 39 AIIVGNDPASKTYV-ASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKP 117 (285)
T ss_dssp EEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCG
T ss_pred EEEECCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCc
Confidence 33456 44333221 234457899999999998853 4677777777 467899999999997 666666655
Q ss_pred hcHHHHHhccceEEEEeCCCCe-EEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHH
Q 015310 310 VHPLAQAIAAVNTIIRRPSDGK-LIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGA 387 (409)
Q Consensus 310 ~~~~A~~igAvNti~~~~~~g~-l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL 387 (409)
+..+.-++.+|+-... .|. ....+++-.|++..|++. +.+++||+++|+|+|+ +|+.++..|
T Consensus 118 -~KDVDG~~~~N~G~l~--~g~~~~~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVIG~s~iVG~p~A~lL 181 (285)
T 3l07_A 118 -EKDVDGFHPTNVGRLQ--LRDKKCLESCTPKGIMTMLREY-------------GIKTEGAYAVVVGASNVVGKPVSQLL 181 (285)
T ss_dssp -GGBTTCCSHHHHHHHH--HTCTTCCCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHH
T ss_pred -ccccccCChhheeehh--cCCCCCCCCCCHHHHHHHHHHh-------------CCCCCCCEEEEECCCchhHHHHHHHH
Confidence 5555666777765322 122 345788999999988763 2678999999999999 799999999
Q ss_pred HhCCCeEEEEeCCh
Q 015310 388 KSRGARVVIFDIDF 401 (409)
Q Consensus 388 ~~~G~~i~v~nR~~ 401 (409)
...|+.|+|++|+.
T Consensus 182 ~~~gAtVtv~hs~t 195 (285)
T 3l07_A 182 LNAKATVTTCHRFT 195 (285)
T ss_dssp HHTTCEEEEECTTC
T ss_pred HHCCCeEEEEeCCc
Confidence 99999999999753
No 31
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.72 E-value=7.9e-09 Score=98.87 Aligned_cols=147 Identities=15% Similarity=0.170 Sum_probs=104.7
Q ss_pred Eeeec-cCCcccCCHHhHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccch-----HHHHhhhhh
Q 015310 241 FGLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDE 309 (409)
Q Consensus 241 ~~viG-~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K-----~~i~~~~d~ 309 (409)
.-++| +|-|++--- .-.++++++|++..+..++. +++.+.++.+ .++++.|+.|++|++ +.++..++-
T Consensus 38 vilvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p 116 (285)
T 3p2o_A 38 VILVGDNPASQTYVK-SKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS 116 (285)
T ss_dssp EEEESCCHHHHHHHH-HHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG
T ss_pred EEEeCCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCc
Confidence 34456 443333221 33457899999999998873 4677777777 467999999999997 556655543
Q ss_pred hcHHHHHhccceEEEEeCCCCeEEE-EcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHH
Q 015310 310 VHPLAQAIAAVNTIIRRPSDGKLIG-YNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGA 387 (409)
Q Consensus 310 ~~~~A~~igAvNti~~~~~~g~l~G-~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL 387 (409)
+..+.-+..+|+-... .|...| .+++-.|++..|++. +.+++||+++|+|+|+ +|+.++..|
T Consensus 117 -~KDVDg~~~~N~g~l~--~g~~~g~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVvGrs~iVG~p~A~lL 180 (285)
T 3p2o_A 117 -SKDVDGFHPINVGYLN--LGLESGFLPCTPLGVMKLLKAY-------------EIDLEGKDAVIIGASNIVGRPMATML 180 (285)
T ss_dssp -GGCTTCCSHHHHHHHH--TTCCSSCCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHH
T ss_pred -ccccccCCHhhhhhhh--cCCCCCCCCCCHHHHHHHHHHh-------------CCCCCCCEEEEECCCchHHHHHHHHH
Confidence 3344445666754222 222332 788999999988763 2678999999999998 799999999
Q ss_pred HhCCCeEEEEeCChHHH
Q 015310 388 KSRGARVVIFDIDFEQS 404 (409)
Q Consensus 388 ~~~G~~i~v~nR~~~ka 404 (409)
...|+.|+|++|+....
T Consensus 181 ~~~gAtVtv~h~~t~~L 197 (285)
T 3p2o_A 181 LNAGATVSVCHIKTKDL 197 (285)
T ss_dssp HHTTCEEEEECTTCSCH
T ss_pred HHCCCeEEEEeCCchhH
Confidence 99999999999864433
No 32
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.64 E-value=1.9e-08 Score=96.27 Aligned_cols=143 Identities=16% Similarity=0.167 Sum_probs=103.9
Q ss_pred Eeeec-cCCcccCCHHhHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccchH-----HHHhhhhh
Q 015310 241 FGLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKE-----AVMKFCDE 309 (409)
Q Consensus 241 ~~viG-~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K~-----~i~~~~d~ 309 (409)
.-++| +|-|++--- .-.++++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++. .++..++-
T Consensus 40 vilvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p 118 (286)
T 4a5o_A 40 VILVGTDPASQVYVA-HKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHP 118 (286)
T ss_dssp EEEESCCHHHHHHHH-HHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCG
T ss_pred EEEeCCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCc
Confidence 34556 444443211 33457899999999998853 4677777777 4678999999999976 55555543
Q ss_pred hcHHHHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHHH
Q 015310 310 VHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAK 388 (409)
Q Consensus 310 ~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL~ 388 (409)
+..+.-+..+|+-... .|.....+++-.|++..|++. +.+++||+++|+|+|+ +|+.++..|.
T Consensus 119 -~KDVDG~~~~N~g~l~--~g~~~~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVvGrs~iVG~plA~lL~ 182 (286)
T 4a5o_A 119 -DKDVDGFHPYNIGRLA--QRMPLLRPCTPKGIMTLLAST-------------GADLYGMDAVVVGASNIVGRPMALELL 182 (286)
T ss_dssp -GGCTTCCSHHHHHHHH--TTCCSSCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECTTSTTHHHHHHHHH
T ss_pred -ccccccCChhhhHHHh--cCCCCCCCCCHHHHHHHHHHh-------------CCCCCCCEEEEECCCchhHHHHHHHHH
Confidence 4445556677764222 222345788999999988763 2678999999999998 8999999999
Q ss_pred hCCCeEEEEeCC
Q 015310 389 SRGARVVIFDID 400 (409)
Q Consensus 389 ~~G~~i~v~nR~ 400 (409)
..|+.|++++|.
T Consensus 183 ~~gAtVtv~hs~ 194 (286)
T 4a5o_A 183 LGGCTVTVTHRF 194 (286)
T ss_dssp HTTCEEEEECTT
T ss_pred HCCCeEEEEeCC
Confidence 999999999873
No 33
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.64 E-value=3.5e-08 Score=95.03 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=103.9
Q ss_pred Eeeec-cCCcccCCHHhHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccch-----HHHHhhhhh
Q 015310 241 FGLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYK-----EAVMKFCDE 309 (409)
Q Consensus 241 ~~viG-~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K-----~~i~~~~d~ 309 (409)
.-++| +|-|++--- .-..+++++|++..+..++. +++.+.++.+ .++++.|+.|.+|++ +.++..++-
T Consensus 42 vilvg~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p 120 (300)
T 4a26_A 42 SIIVGQRMDSKKYVQ-LKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHP 120 (300)
T ss_dssp EEEESCCHHHHHHHH-HHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCG
T ss_pred EEEeCCCHHHHHHHH-HHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCc
Confidence 34556 444443222 33456899999999998853 4677777777 467899999999998 666666654
Q ss_pred hcHHHHHhccceEEEEeCCCC-eEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHH
Q 015310 310 VHPLAQAIAAVNTIIRRPSDG-KLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGA 387 (409)
Q Consensus 310 ~~~~A~~igAvNti~~~~~~g-~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL 387 (409)
+..+.-+..+|+-.... ++ .-.-.+++-.|++..|++. +.+++|++++|+|+|+ +|+.++..|
T Consensus 121 -~KDVDG~~~~N~G~l~~-g~~~~~~~PcTp~gv~~lL~~~-------------~i~l~Gk~vvVIG~s~iVG~p~A~lL 185 (300)
T 4a26_A 121 -HKDADALLPVNVGLLHY-KGREPPFTPCTAKGVIVLLKRC-------------GIEMAGKRAVVLGRSNIVGAPVAALL 185 (300)
T ss_dssp -GGCTTCCSHHHHHHHHC-TTCCCSCCCHHHHHHHHHHHHH-------------TCCCTTCEEEEECCCTTTHHHHHHHH
T ss_pred -ccccccCCcceEEEeec-CCCcCCCCCCCHHHHHHHHHHc-------------CCCCCCCEEEEECCCchHHHHHHHHH
Confidence 44455566777643220 11 1112688889999998764 2678999999999999 799999999
Q ss_pred HhCCCeEEEEeC
Q 015310 388 KSRGARVVIFDI 399 (409)
Q Consensus 388 ~~~G~~i~v~nR 399 (409)
...|+.|+|++|
T Consensus 186 ~~~gAtVtv~~~ 197 (300)
T 4a26_A 186 MKENATVTIVHS 197 (300)
T ss_dssp HHTTCEEEEECT
T ss_pred HHCCCeEEEEeC
Confidence 999999999998
No 34
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=97.83 E-value=9.9e-06 Score=84.82 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=51.1
Q ss_pred CCCeEEEEcCcHHHHHHHHHHH-------HH--hcCcCCCCCCCC-CCCCCCEEEEEechhHHHHHHHHHHhCCC-eEEE
Q 015310 328 SDGKLIGYNTDCEASITAIEDA-------IK--ERGYKNGTASFG-SPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVI 396 (409)
Q Consensus 328 ~~g~l~G~NTD~~G~~~~l~~~-------l~--~~~~~~~~~~~~-~~~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v 396 (409)
.+|++.|+|||+.|++.+++-. ++ +-..-. ..+ ..+++++|+|+|+||.|.+++..|+..|+ +|+|
T Consensus 280 ~~Gkl~g~~tD~~g~l~~~~la~~~~~lnL~lmrwrll~---~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItL 356 (598)
T 3vh1_A 280 VQGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILP---DLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITF 356 (598)
T ss_dssp TTSSSSCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHCT---TCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCCCcceeecchhccCHHHHHHHHHhhhhhhhhhhccc---hhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 3799999999999999988611 00 000000 000 23567899999999999999999999999 9999
Q ss_pred EeCC
Q 015310 397 FDID 400 (409)
Q Consensus 397 ~nR~ 400 (409)
++.+
T Consensus 357 vD~D 360 (598)
T 3vh1_A 357 VDNG 360 (598)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9544
No 35
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.69 E-value=1.8e-05 Score=78.19 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=53.7
Q ss_pred CCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHh-CCC-eEEEEeCChHHHHh
Q 015310 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 329 ~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~-~G~-~i~v~nR~~~ka~~ 406 (409)
++.+.|+|||..|++.+.. +. ....+++.|||+|++|++.+.+|.. .+. +|+|+||+.+++++
T Consensus 105 ~~~lT~~RTaa~s~laa~~--la-------------~~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~ 169 (350)
T 1x7d_A 105 LTIATALRTAATSLMAAQA--LA-------------RPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAK 169 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHH--HS-------------CTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHH
T ss_pred CCEEEeehhhHHHHHHHHH--hc-------------cccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHH
Confidence 4568889999999998863 32 1246799999999999999988754 566 89999999999998
Q ss_pred hh
Q 015310 407 LL 408 (409)
Q Consensus 407 la 408 (409)
++
T Consensus 170 la 171 (350)
T 1x7d_A 170 LI 171 (350)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 36
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.65 E-value=2.5e-05 Score=76.22 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=53.4
Q ss_pred CCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHh-CCC-eEEEEeCChHHHHh
Q 015310 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 329 ~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~-~G~-~i~v~nR~~~ka~~ 406 (409)
++.+.++||+..|.+.+.. +. ....++++|||+|++|++.+.+|.+ .++ +|+|+||+.+++++
T Consensus 101 ~~~lt~~RTaa~s~laa~~--la-------------~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~ 165 (322)
T 1omo_A 101 ATYTTSLRTGAAGGIAAKY--LA-------------RKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKK 165 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHH--HS-------------CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHh--cc-------------CCCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHH
Confidence 3457789999999988752 32 1246799999999999999999987 456 89999999999998
Q ss_pred hh
Q 015310 407 LL 408 (409)
Q Consensus 407 la 408 (409)
++
T Consensus 166 la 167 (322)
T 1omo_A 166 FV 167 (322)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 37
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.52 E-value=3.9e-05 Score=74.46 Aligned_cols=65 Identities=15% Similarity=0.136 Sum_probs=53.9
Q ss_pred CCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhC-CC-eEEEEeCChHHHHh
Q 015310 329 DGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSR-GA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 329 ~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~-G~-~i~v~nR~~~ka~~ 406 (409)
++.+.++|||..|++.+. .+. ....+++.|||+|.+|++.+.+|.+. |. +|+|+||+.+++++
T Consensus 111 ~~~lt~~rT~a~~~la~~--~la-------------~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~ 175 (312)
T 2i99_A 111 GNVITAKRTAAVSAIATK--FLK-------------PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEK 175 (312)
T ss_dssp CHHHHHHHHHHHHHHHHH--HHS-------------CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHH
T ss_pred chhHHHHHHHHHHHHHHH--HhC-------------CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHH
Confidence 345788999999998873 232 23467899999999999999999876 88 99999999999988
Q ss_pred hh
Q 015310 407 LL 408 (409)
Q Consensus 407 la 408 (409)
++
T Consensus 176 l~ 177 (312)
T 2i99_A 176 FA 177 (312)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 38
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.39 E-value=8.2e-05 Score=63.38 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=38.4
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
+++++|+|+|++|++++..|...|++|++++|+.+++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a 61 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFA 61 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHH
Confidence 78999999999999999999999999999999999998765
No 39
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.34 E-value=0.0029 Score=57.35 Aligned_cols=122 Identities=17% Similarity=0.189 Sum_probs=78.1
Q ss_pred CeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHH
Q 015310 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (409)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (409)
...|+.+|...+.+++.+.++.+.+.|+|++|+|.-. .+..+.+..+.+..+.|+++-. |+.. ++ +
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~---~~~~~~i~~i~~~~~~~l~vg~-----g~~~--~~-~--- 71 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS---PQWEQSIPAIVDAYGDKALIGA-----GTVL--KP-E--- 71 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS---TTHHHHHHHHHHHHTTTSEEEE-----ECCC--SH-H---
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHhCCCCeEEEe-----cccc--CH-H---
Confidence 5667889999999999999999988999999998542 1222345555554567777621 2221 22 2
Q ss_pred HHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 90 ALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 90 ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
.++.+++.|+|+|=+.-. ..+..+ ..+..+.+++.+.|+ .+++ .+..+.|+|++++
T Consensus 72 ~i~~a~~~Gad~V~~~~~-~~~~~~---~~~~~g~~~~~g~~t------~~e~----~~a~~~G~d~v~v 127 (212)
T 2v82_A 72 QVDALARMGCQLIVTPNI-HSEVIR---RAVGYGMTVCPGCAT------ATEA----FTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHTTCCEEECSSC-CHHHHH---HHHHTTCEEECEECS------HHHH----HHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEeCCC-CHHHHH---HHHHcCCCEEeecCC------HHHH----HHHHHCCCCEEEE
Confidence 356778889999853321 122222 223356777777552 2343 3456789999996
No 40
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00017 Score=73.86 Aligned_cols=45 Identities=13% Similarity=0.131 Sum_probs=38.1
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCC-CeEEEEeCChHHHHhhh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G-~~i~v~nR~~~ka~~la 408 (409)
..+++++++|+||||+|++++.+|.+.| ++|+|++|+.+++++++
T Consensus 19 ~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la 64 (467)
T 2axq_A 19 GRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALA 64 (467)
T ss_dssp ----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHH
T ss_pred cCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 4567889999999999999999999995 59999999999998875
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.23 E-value=0.00028 Score=70.89 Aligned_cols=44 Identities=25% Similarity=0.472 Sum_probs=40.1
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhhh
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~la 408 (409)
++.|++++|+|+|++|++++..|...|+ +|+++||+.+++++++
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la 208 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA 208 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 3578999999999999999999999999 9999999999987664
No 42
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.20 E-value=0.00046 Score=55.59 Aligned_cols=42 Identities=24% Similarity=0.248 Sum_probs=37.5
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCC-CeEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G-~~i~v~nR~~~ka~~la 408 (409)
.+++++|+|+|++|++++..|.+.| .+|++++|+.++++.+.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 3578999999999999999999999 59999999999887653
No 43
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.16 E-value=0.00063 Score=64.59 Aligned_cols=132 Identities=14% Similarity=0.142 Sum_probs=82.0
Q ss_pred eeec-cCCcccCCHHhHHHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccchHHHHhhhhhhcHHHH
Q 015310 242 GLIS-KPVGHSKGPILHNPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQ 315 (409)
Q Consensus 242 ~viG-~pi~hS~SP~ihn~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~ 315 (409)
-++| +|-|++--- .-.+..++.|+ .....++. +++.+.++.+ .++++.|+-|-.|.-. ++|+ -+
T Consensus 33 ilvg~dpaS~~Yv~-~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~----~id~----~~ 102 (276)
T 3ngx_A 33 IQIGDNEAASIYAR-AKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPK----GFDY----YE 102 (276)
T ss_dssp EEESCCHHHHHHHH-HHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHCTTCCEEEECSCCCT----TCCH----HH
T ss_pred EEeCCCHHHHHHHH-HHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCCCCCcEEEEeCCCCC----CCCH----HH
Confidence 3456 444433222 23446789999 76555542 3566666666 5788999999999742 2221 12
Q ss_pred HhccceEEEEeCCCCeEEEEcCc-------------HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHH
Q 015310 316 AIAAVNTIIRRPSDGKLIGYNTD-------------CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGR 381 (409)
Q Consensus 316 ~igAvNti~~~~~~g~l~G~NTD-------------~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aar 381 (409)
.+.+++--.- -|| ++-+|.- -.|++..|++. . ++|++++|+|+|+ +|+
T Consensus 103 v~~~I~p~KD--VDG-~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~--------------~-l~Gk~vvVvG~s~iVG~ 164 (276)
T 3ngx_A 103 IVRNIPYYKD--VDA-LSPYNQGLIALNREFLVPATPRAVIDIMDYY--------------G-YHENTVTIVNRSPVVGR 164 (276)
T ss_dssp HHTTSCGGGB--TTC-CSHHHHHHHHTTCCSSCCHHHHHHHHHHHHH--------------T-CCSCEEEEECCCTTTHH
T ss_pred HHhhCCCCCc--ccC-CCccchhhhhcCCCCCCCCcHHHHHHHHHHh--------------C-cCCCEEEEEcCChHHHH
Confidence 2222222100 022 2212211 15777777653 2 7899999999998 899
Q ss_pred HHHHHHHhCCCeEEEEeCCh
Q 015310 382 ALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 382 ai~~aL~~~G~~i~v~nR~~ 401 (409)
.++..|...|+.|++++|+.
T Consensus 165 plA~lL~~~gAtVtv~~~~t 184 (276)
T 3ngx_A 165 PLSMMLLNRNYTVSVCHSKT 184 (276)
T ss_dssp HHHHHHHHTTCEEEEECTTC
T ss_pred HHHHHHHHCCCeEEEEeCCc
Confidence 99999999999999998853
No 44
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.15 E-value=0.00032 Score=68.22 Aligned_cols=129 Identities=18% Similarity=0.124 Sum_probs=79.2
Q ss_pred HHHHHhcCCCceEeecCcc-cHHHHHHHh-cCCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEEeCCCC-----
Q 015310 258 NPTFRHVNYNGIYVPMFVD-DLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG----- 330 (409)
Q Consensus 258 n~~f~~~gl~~~y~~~~~~-~l~~~~~~~-~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~~~~~g----- 330 (409)
....++.|+......++-+ ++.+.+..+ .++++.|+-|-.|.-.. +|+ . +.+.+++--. + =||
T Consensus 58 ~k~~~~~Gi~~~~~~l~~~~~l~~~i~~lN~d~~v~GIlvqlPlp~~----~~~---~-~i~~~I~p~K-D-VDG~~~~n 127 (320)
T 1edz_A 58 QKTSESMGFRYDLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGN----AQD---Q-YLQQVVCKEK-D-VEGLNHVY 127 (320)
T ss_dssp HHHHHHHTCEEEEEECSSGGGHHHHHHHHHHCTTCCEEEECSCSSSS----HHH---H-HHTTTSCTTT-B-TTCCSHHH
T ss_pred HHHHHHcCCEEEEEECCChHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CCH---H-HHHhccCccc-c-cCcCChhh
Confidence 4467899999877777654 477777777 67899999999997422 211 1 1222221100 0 011
Q ss_pred --eE-EE------------E-cCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhH-HHHHHHHHHhCCCe
Q 015310 331 --KL-IG------------Y-NTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA-GRALAFGAKSRGAR 393 (409)
Q Consensus 331 --~l-~G------------~-NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGa-arai~~aL~~~G~~ 393 (409)
++ .| + -.--.|.+..|++. +..+..=+.+.+++|++++|+|+|.+ |+.++..|...|+.
T Consensus 128 ~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll~~~----~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt 203 (320)
T 1edz_A 128 YQNLYHNVRYLDKENRLKSILPCTPLAIVKILEFL----KIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGAT 203 (320)
T ss_dssp HHHHHTTCCBSSSSSCSBCCCCHHHHHHHHHHHHT----TCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCE
T ss_pred hHHHhcCCccccccccCCCcCCCcHHHHHHHHHhh----cccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCE
Confidence 00 00 0 01125666666542 00000000124788999999999985 99999999999999
Q ss_pred EEEEeCC
Q 015310 394 VVIFDID 400 (409)
Q Consensus 394 i~v~nR~ 400 (409)
|+|+||+
T Consensus 204 Vtv~nR~ 210 (320)
T 1edz_A 204 VYSVDVN 210 (320)
T ss_dssp EEEECSS
T ss_pred EEEEeCc
Confidence 9999998
No 45
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=97.07 E-value=2e-05 Score=80.09 Aligned_cols=67 Identities=21% Similarity=0.258 Sum_probs=50.7
Q ss_pred HHHhccceEEEEeCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC-
Q 015310 314 AQAIAAVNTIIRRPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA- 392 (409)
Q Consensus 314 A~~igAvNti~~~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~- 392 (409)
...+|++|||+.+ +|++.| .||...++..- ..+++.+|+|+|+||.|..++..|+..|+
T Consensus 6 ~~r~~~vntl~~~--~g~~~g-----~gf~~g~e~~~-------------~~L~~~~VlvvG~GGlGs~va~~La~aGvg 65 (434)
T 1tt5_B 6 EGRWNHVKKFLER--SGPFTH-----PDFEPSTESLQ-------------FLLDTCKVLVIGAGGLGCELLKNLALSGFR 65 (434)
T ss_dssp TTTTHHHHHHHHS--CCSSCC-----TTCCCCSSHHH-------------HHHHTCCEEEECSSTHHHHHHHHHHHTTCC
T ss_pred hhhhccceEEEcC--CCcccc-----cccccCHHHHH-------------HHhcCCEEEEECcCHHHHHHHHHHHHcCCC
Confidence 4578999999987 787776 55544432210 01245789999999999999999999999
Q ss_pred eEEEEeCC
Q 015310 393 RVVIFDID 400 (409)
Q Consensus 393 ~i~v~nR~ 400 (409)
+|+|++.+
T Consensus 66 ~i~ivD~D 73 (434)
T 1tt5_B 66 QIHVIDMD 73 (434)
T ss_dssp CEEEEECC
T ss_pred EEEEEcCC
Confidence 99999543
No 46
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.90 E-value=0.0004 Score=65.09 Aligned_cols=36 Identities=28% Similarity=0.426 Sum_probs=33.5
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCCh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~ 401 (409)
+++++|+|+|+||.|..++..|+..|+ +|+|++++.
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 346799999999999999999999999 999999997
No 47
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.88 E-value=0.031 Score=51.58 Aligned_cols=118 Identities=16% Similarity=0.213 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 015310 22 VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADY 101 (409)
Q Consensus 22 ~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dy 101 (409)
.+++.+.++.+...|+..++. ...+.+..+++..++|+|--+|..-.|-.+-.++ +.+-.+.+.+.|+|+
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRI--------EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADI 104 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSE
T ss_pred cchHHHHHHHHHHCCCcEEEE--------CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCE
Confidence 667777788888889999875 1235788888888999987766432221122222 223345677889999
Q ss_pred EEEeccC--ccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 102 VDFELKV--ASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 102 vDiEl~~--~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
|=+.... .++.+.+++ ..++.+..++.+.|+ .++ .+++.+.|+|++-+
T Consensus 105 I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t------~ee----a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 105 IAFDASFRSRPVDIDSLLTRIRLHGLLAMADCST------VNE----GISCHQKGIEFIGT 155 (229)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSS------HHH----HHHHHHTTCSEEEC
T ss_pred EEECccccCChHHHHHHHHHHHHCCCEEEEecCC------HHH----HHHHHhCCCCEEEe
Confidence 8776543 223344444 345568899999885 233 45677899999954
No 48
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.88 E-value=0.0015 Score=62.70 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=39.8
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+.+++++|+|+|++|++++..|..+|++|++++|+.++.+.+
T Consensus 153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~ 196 (300)
T 2rir_A 153 YTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARI 196 (300)
T ss_dssp SCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 46789999999999999999999999999999999998876643
No 49
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.81 E-value=0.0018 Score=61.92 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=38.9
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
..+.|++++|+|+|++|++++..|..+|++|++++|+.++.+.
T Consensus 151 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~ 193 (293)
T 3d4o_A 151 FTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLAR 193 (293)
T ss_dssp SCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 4578999999999999999999999999999999999877543
No 50
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.79 E-value=0.0035 Score=62.07 Aligned_cols=44 Identities=23% Similarity=0.373 Sum_probs=41.0
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
+++||+++|+|+|.+|+.++..|.++|++|+++||+.+++++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a 213 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV 213 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 68899999999999999999999999999999999999888764
No 51
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.77 E-value=0.0018 Score=55.57 Aligned_cols=43 Identities=28% Similarity=0.253 Sum_probs=38.8
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
..+++++|+|+|..|+.++..|.+.|.+|++++|++++++.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 4578999999999999999999999999999999999887653
No 52
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.68 E-value=0.0031 Score=64.63 Aligned_cols=44 Identities=36% Similarity=0.498 Sum_probs=40.0
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+.||+++|+|+||.|++++..|+..|++|++++|++.++.+.
T Consensus 261 ~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~A 304 (488)
T 3ond_A 261 VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 304 (488)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 45789999999999999999999999999999999998877543
No 53
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.67 E-value=0.0021 Score=58.59 Aligned_cols=44 Identities=27% Similarity=0.253 Sum_probs=37.4
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++++++|.|+ |+.|++++..|.+.|++|+++.|+.++.+++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~ 61 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence 4578999999997 8999999999999999999999999887765
No 54
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.60 E-value=0.059 Score=49.74 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=81.1
Q ss_pred EEEeeccCC------HHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCC-CCCCHH
Q 015310 13 ICAPLMAQS------VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGL-YEGDEH 85 (409)
Q Consensus 13 icv~l~~~~------~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~-~~~~~~ 85 (409)
+.|+.-... .+++.+.++.+.+.|+..++. ...+.+..+++..++|+|--+|. .-||. +-.++
T Consensus 20 livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--------~~~~~i~~ir~~v~~Pvig~~k~-d~~~~~~~I~~- 89 (232)
T 3igs_A 20 LIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRI--------EGIDNLRMTRSLVSVPIIGIIKR-DLDESPVRITP- 89 (232)
T ss_dssp EEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE--------ESHHHHHHHHTTCCSCEEEECBC-CCSSCCCCBSC-
T ss_pred EEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEE--------CCHHHHHHHHHhcCCCEEEEEee-cCCCcceEeCc-
Confidence 445544444 677777788888889999875 12357888888889999755553 33552 22222
Q ss_pred HHHHHHHHHHHcCCcEEEEeccC--ccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 86 KRLEALHLAEDLGADYVDFELKV--ASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 86 ~~~~ll~~~~~~g~dyvDiEl~~--~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
+.+-.+.+.+.|+|+|=+.... .++.+++++ ..++.+..++.+.|+ . +..+++.+.|+|++-+
T Consensus 90 -~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t------~----eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 90 -FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSS------V----DDGLACQRLGADIIGT 155 (232)
T ss_dssp -SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCS------H----HHHHHHHHTTCSEEEC
T ss_pred -cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCC------H----HHHHHHHhCCCCEEEE
Confidence 2233456778899998776543 123344444 345568899999885 2 2346677899999953
No 55
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.53 E-value=0.0016 Score=61.11 Aligned_cols=35 Identities=29% Similarity=0.429 Sum_probs=31.5
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~ 400 (409)
+++++|+|+|+||+|..++..|+..|+ +|+|++++
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 346799999999999999999999999 99999654
No 56
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=96.51 E-value=0.0035 Score=59.60 Aligned_cols=43 Identities=30% Similarity=0.303 Sum_probs=39.3
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
++||.+||-|+ +|.|++++..|++.|++|++++|+.++.++++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~ 70 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI 70 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 78999999986 78999999999999999999999999887754
No 57
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.49 E-value=0.0034 Score=52.67 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=37.1
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.++++|+|+|..|++++..|.+.|.+|++++|++++++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~ 45 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL 45 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 5689999999999999999999999999999999988765
No 58
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.47 E-value=0.069 Score=49.05 Aligned_cols=121 Identities=17% Similarity=0.241 Sum_probs=70.6
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (409)
.|+.-|...+.+++...++.+.+.|++++|+|.. ..+..+.++.+.+..+ .+++-. |. -.+. + -.
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k---~~~~~~~i~~l~~~~~-~l~vga------Gt-vl~~-d---~~ 82 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLAKNGLSVAEITFR---SEAAADAIRLLRANRP-DFLIAA------GT-VLTA-E---QV 82 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT---STTHHHHHHHHHHHCT-TCEEEE------ES-CCSH-H---HH
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEecc---CchHHHHHHHHHHhCc-CcEEee------Cc-EeeH-H---HH
Confidence 3445567788999998899999999999999943 2232344555555443 233222 11 1222 3 34
Q ss_pred HHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015310 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 92 ~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~ 163 (409)
+.+++.|+|+|=.- ....+..+ ..++.+..+|.-.| || +|+ .++.+.|+|++|+ .|
T Consensus 83 ~~A~~aGAd~v~~p-~~d~~v~~---~ar~~g~~~i~Gv~----t~--~e~----~~A~~~Gad~vk~--Fp 138 (224)
T 1vhc_A 83 VLAKSSGADFVVTP-GLNPKIVK---LCQDLNFPITPGVN----NP--MAI----EIALEMGISAVKF--FP 138 (224)
T ss_dssp HHHHHHTCSEEECS-SCCHHHHH---HHHHTTCCEECEEC----SH--HHH----HHHHHTTCCEEEE--TT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHH---HHHHhCCCEEeccC----CH--HHH----HHHHHCCCCEEEE--ee
Confidence 56788899999322 11222222 22234555554444 33 333 4566889999999 55
No 59
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.40 E-value=0.083 Score=48.13 Aligned_cols=121 Identities=13% Similarity=0.146 Sum_probs=72.6
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (409)
.++..|...+.+++...++.+.+.|++++|+|.. .....+.++.+.+..+-.++ -. |.. .+. + -.
T Consensus 17 ~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k---~~~~~~~i~~l~~~~~~~~v-ga------gtv-i~~-d---~~ 81 (214)
T 1wbh_A 17 PVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLR---TECAVDAIRAIAKEVPEAIV-GA------GTV-LNP-Q---QL 81 (214)
T ss_dssp SEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESC---STTHHHHHHHHHHHCTTSEE-EE------ESC-CSH-H---HH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCC---ChhHHHHHHHHHHHCcCCEE-ee------CEE-EEH-H---HH
Confidence 3555667788999998899999999999999953 22223445555554432222 11 222 232 2 34
Q ss_pred HHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015310 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 92 ~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~ 163 (409)
+.+++.|+|+|=.- ..+.+..+ ..+..+..+|...| || +| +.++.+.|+|++|+ .|
T Consensus 82 ~~A~~aGAd~v~~p-~~d~~v~~---~~~~~g~~~i~G~~----t~--~e----~~~A~~~Gad~v~~--Fp 137 (214)
T 1wbh_A 82 AEVTEAGAQFAISP-GLTEPLLK---AATEGTIPLIPGIS----TV--SE----LMLGMDYGLKEFKF--FP 137 (214)
T ss_dssp HHHHHHTCSCEEES-SCCHHHHH---HHHHSSSCEEEEES----SH--HH----HHHHHHTTCCEEEE--TT
T ss_pred HHHHHcCCCEEEcC-CCCHHHHH---HHHHhCCCEEEecC----CH--HH----HHHHHHCCCCEEEE--ec
Confidence 56788899998543 22222221 22335566666665 33 33 34556789999999 55
No 60
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=96.37 E-value=0.005 Score=57.71 Aligned_cols=44 Identities=27% Similarity=0.413 Sum_probs=39.1
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 61 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEA 61 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5678999999985 8899999999999999999999998876654
No 61
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.36 E-value=0.068 Score=48.42 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=70.4
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (409)
.|+..+...+.+++...++.+.+.|++++|+|.. ..+..+.++.+++ .+ +++-. |.. ... + -+
T Consensus 14 ~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k---~~~~~~~i~~~~~-~~--~~~ga------g~v-l~~-d---~~ 76 (207)
T 2yw3_A 14 RLLPLLTVRGGEDLLGLARVLEEEGVGALEITLR---TEKGLEALKALRK-SG--LLLGA------GTV-RSP-K---EA 76 (207)
T ss_dssp CEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECS---STHHHHHHHHHTT-SS--CEEEE------ESC-CSH-H---HH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCC---ChHHHHHHHHHhC-CC--CEEEe------CeE-eeH-H---HH
Confidence 4556667778888888888888889999999953 2222334444444 22 22222 221 222 3 34
Q ss_pred HHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015310 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (409)
Q Consensus 92 ~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~ 164 (409)
+.+++.|+++|=.- ..+.+..+.. +..+..+|...|+ | +|+ .++.+.|+|++|+ .|.
T Consensus 77 ~~A~~~GAd~v~~~-~~d~~v~~~~---~~~g~~~i~G~~t----~--~e~----~~A~~~Gad~v~~--fpa 133 (207)
T 2yw3_A 77 EAALEAGAAFLVSP-GLLEEVAALA---QARGVPYLPGVLT----P--TEV----ERALALGLSALKF--FPA 133 (207)
T ss_dssp HHHHHHTCSEEEES-SCCHHHHHHH---HHHTCCEEEEECS----H--HHH----HHHHHTTCCEEEE--TTT
T ss_pred HHHHHcCCCEEEcC-CCCHHHHHHH---HHhCCCEEecCCC----H--HHH----HHHHHCCCCEEEE--ecC
Confidence 56788899998543 2222222222 2245566766663 3 333 4455779999999 553
No 62
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.34 E-value=0.0048 Score=61.24 Aligned_cols=43 Identities=33% Similarity=0.372 Sum_probs=38.6
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+.+++++|+|+|++|++++..+..+|++|++++|+.++.+.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~ 207 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQL 207 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 3678999999999999999999999999999999998886543
No 63
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.34 E-value=0.0047 Score=61.03 Aligned_cols=43 Identities=30% Similarity=0.374 Sum_probs=38.7
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++++++|+|+|++|++++..+..+|++|++++|+.++.+.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~ 205 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYL 205 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 3678999999999999999999999999999999998876654
No 64
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.31 E-value=0.051 Score=49.76 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=72.4
Q ss_pred CCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-c--CCCCCCC-hhHHHHHHhcCCCcEEEEeccCCCCCCCCCC
Q 015310 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-D--CINNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGD 83 (409)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D--~l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~ 83 (409)
..+|+|+.+|..-+..++.++++.+.+.|+|++++|+ | +.++... .+.++.+++.++.|+.+.+=.. +
T Consensus 4 ~~~~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~--------d 75 (228)
T 1h1y_A 4 AAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVT--------N 75 (228)
T ss_dssp --CCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESS--------C
T ss_pred ccCCeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEec--------C
Confidence 3568899999999999999999998888999999996 2 2222221 2466677766677887666542 1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccCccch-HHHHHhccCCCcEEEEecc
Q 015310 84 EHKRLEALHLAEDLGADYVDFELKVASNI-LGKQYSSHQSGTRFIVSCN 131 (409)
Q Consensus 84 ~~~~~~ll~~~~~~g~dyvDiEl~~~~~~-~~~l~~~~~~~~kiI~S~H 131 (409)
++++ ++.+.+.|+|+|=+=....++. .+.+...++.+.++++|.+
T Consensus 76 ~~~~---i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~ 121 (228)
T 1h1y_A 76 PSDY---VEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLR 121 (228)
T ss_dssp GGGG---HHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHH---HHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEe
Confidence 2333 4556667899886654443333 1112223345677777774
No 65
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.26 E-value=0.003 Score=61.90 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=33.1
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCCh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~ 401 (409)
+++++|+|+|+||.|.+++..|+..|+ +|+|++++.
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 457899999999999999999999999 999998864
No 66
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=96.22 E-value=0.005 Score=57.81 Aligned_cols=45 Identities=29% Similarity=0.418 Sum_probs=39.9
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
..+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.++++
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~ 71 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA 71 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 3577899999996 88999999999999999999999998887653
No 67
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=96.19 E-value=0.0054 Score=57.04 Aligned_cols=44 Identities=32% Similarity=0.329 Sum_probs=39.5
Q ss_pred CCCCCCEEEEEec-h-hHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-G-GAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-G-Gaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|++||.|+ | |.|++++..|.+.|++|++++|+.++.+++
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 63 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGET 63 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHH
Confidence 4578999999998 8 899999999999999999999998887654
No 68
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.18 E-value=0.0051 Score=54.01 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=38.6
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhC-CCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~-G~~i~v~nR~~~ka~~l 407 (409)
+..+++++|+|+|.+|+.++..|.+. |.+|++++|++++++.+
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 35567899999999999999999999 99999999999988765
No 69
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=96.17 E-value=0.0066 Score=57.24 Aligned_cols=44 Identities=23% Similarity=0.384 Sum_probs=39.3
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.++++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 72 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV 72 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3578999999996 8899999999999999999999998887665
No 70
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.12 E-value=0.0048 Score=58.91 Aligned_cols=121 Identities=17% Similarity=0.206 Sum_probs=77.5
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEEeCCCCeE
Q 015310 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKL 332 (409)
Q Consensus 258 n~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~~~~~g~l 332 (409)
.+..++.|+......++- +++.+.+..+ .++.+.|+-|-.|.-. ++|+ . +.+.+++--. + -|| +
T Consensus 55 ~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~----~id~---~-~i~~~I~p~K-D-VDG-~ 123 (288)
T 1b0a_A 55 RKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPA----GIDN---V-KVLERIHPDK-D-VDG-F 123 (288)
T ss_dssp HHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCT----TSCH---H-HHHTTSCTTT-C-TTC-C
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCC----CCCH---H-HHHhccCCcc-C-ccc-C
Confidence 345788999877666542 3677777777 5788999999999732 1211 1 1111221100 0 011 1
Q ss_pred EEEc-------------CcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHHHhCCCeEEEEe
Q 015310 333 IGYN-------------TDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKSRGARVVIFD 398 (409)
Q Consensus 333 ~G~N-------------TD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL~~~G~~i~v~n 398 (409)
+=+| .--.|++..|++. +.+++|++++|+|+|+ +|+.++.-|...|+.|++++
T Consensus 124 ~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~-------------~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h 190 (288)
T 1b0a_A 124 HPYNVGRLCQRAPRLRPCTPRGIVTLLERY-------------NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH 190 (288)
T ss_dssp SHHHHHHHHTTCCSSCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred CccchhHHhCCCCCCCCCcHHHHHHHHHHc-------------CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEe
Confidence 1000 1125666766543 2578999999999998 69999999999999999998
Q ss_pred CChH
Q 015310 399 IDFE 402 (409)
Q Consensus 399 R~~~ 402 (409)
++..
T Consensus 191 s~t~ 194 (288)
T 1b0a_A 191 RFTK 194 (288)
T ss_dssp SSCS
T ss_pred CCch
Confidence 7643
No 71
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.12 E-value=0.1 Score=46.57 Aligned_cols=118 Identities=19% Similarity=0.229 Sum_probs=75.6
Q ss_pred eeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcC--CCcEEE-EeccCCCCCCCCCCHHHH
Q 015310 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK--PLPVLI-VYRPKWAGGLYEGDEHKR 87 (409)
Q Consensus 11 ~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~--~~PiI~-T~R~~~eGG~~~~~~~~~ 87 (409)
..++..+...+.+++.+.++.+.+.|+|++|+-+.. ....+.+..+++.. +.++-+ |+ .+.++
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~v----------~~~~~- 75 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTV----------TSVEQ- 75 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESC----------CSHHH-
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEeccc----------CCHHH-
Confidence 346678889999999998988888899999985542 11123355555443 334333 21 13332
Q ss_pred HHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 88 LEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 88 ~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
.+.+.+.|+||| +--....+.++. .++.+..+|.-.| || ++ +.++.+.|+|++|+
T Consensus 76 ---~~~a~~~Gad~i-v~~~~~~~~~~~---~~~~g~~vi~g~~----t~--~e----~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 76 ---CRKAVESGAEFI-VSPHLDEEISQF---CKEKGVFYMPGVM----TP--TE----LVKAMKLGHTILKL 130 (205)
T ss_dssp ---HHHHHHHTCSEE-ECSSCCHHHHHH---HHHHTCEEECEEC----SH--HH----HHHHHHTTCCEEEE
T ss_pred ---HHHHHHcCCCEE-EcCCCCHHHHHH---HHHcCCcEECCcC----CH--HH----HHHHHHcCCCEEEE
Confidence 466778899999 765555444332 2346788887544 33 23 44667899999997
No 72
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.12 E-value=0.0071 Score=58.44 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=38.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
..+++.|||+|.+|++++..|.+.|.+|+++||++++++.++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~ 71 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLA 71 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence 356899999999999999999999999999999999988774
No 73
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.11 E-value=0.0076 Score=50.77 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=36.9
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
++++|+|.|..|+.++..|.+.|.+|+++++++++.+.+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~ 47 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELR 47 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 5799999999999999999999999999999999987653
No 74
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=96.10 E-value=0.0079 Score=56.74 Aligned_cols=45 Identities=29% Similarity=0.400 Sum_probs=39.8
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
..+++|++||-|+ ||.|++++..|.+.|++|++++|+.+++++++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 68 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA 68 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4578899999985 88999999999999999999999998877653
No 75
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.08 E-value=0.21 Score=45.06 Aligned_cols=118 Identities=12% Similarity=0.097 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCC-CHHHHHHHHHHHHHcCC
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEG-DEHKRLEALHLAEDLGA 99 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~-~~~~~~~ll~~~~~~g~ 99 (409)
+.+...+.++.+.+.|++.++. | . .+.++.+++..++|++-.+|....|+..-. ...++ ++.+++.|+
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~--~-----~-~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~---i~~~~~~Ga 89 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRA--N-----T-KEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKE---VDELIESQC 89 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE--E-----S-HHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHH---HHHHHHHTC
T ss_pred CCccHHHHHHHHHHCCCeeecc--C-----C-HHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHH---HHHHHhCCC
Confidence 4456666677777789999975 3 1 246778887789999766665433433222 22233 445677899
Q ss_pred cEEEEeccCc-------cchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 100 DYVDFELKVA-------SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 100 dyvDiEl~~~-------~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
|+|-+..... .+.++.++... ++..++.+.|+ .++ ..++.+.|+|++.+.
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~-~~~~v~~~~~t------~~e----~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHA-PNVEIMADIAT------VEE----AKNAARLGFDYIGTT 146 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHC-TTSEEEEECSS------HHH----HHHHHHTTCSEEECT
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhC-CCceEEecCCC------HHH----HHHHHHcCCCEEEeC
Confidence 9887665431 13333333221 37778887763 233 334778899998753
No 76
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.07 E-value=0.0055 Score=60.91 Aligned_cols=41 Identities=24% Similarity=0.196 Sum_probs=37.2
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
+.+++|+|+|+|++|++++..+..+|++|++++|+.++.+.
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQ 210 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 56899999999999999999999999999999999877554
No 77
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=96.06 E-value=0.0072 Score=56.25 Aligned_cols=43 Identities=40% Similarity=0.498 Sum_probs=38.8
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 69 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV 69 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 467899999995 8899999999999999999999999887765
No 78
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=96.05 E-value=0.0091 Score=55.97 Aligned_cols=44 Identities=23% Similarity=0.197 Sum_probs=38.9
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 61 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC 61 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4578899999996 8899999999999999999999998877654
No 79
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=96.01 E-value=0.0098 Score=55.01 Aligned_cols=43 Identities=26% Similarity=0.194 Sum_probs=37.8
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|++++|+.+..++
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~ 58 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR 58 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh
Confidence 5688999999996 889999999999999999999999866554
No 80
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.01 E-value=0.0045 Score=59.41 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=33.6
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCCh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~ 401 (409)
+++++|+|+|+||.|..++..|+..|+ +|+|++++.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 567899999999999999999999999 999999886
No 81
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.00 E-value=0.057 Score=48.32 Aligned_cols=131 Identities=13% Similarity=0.077 Sum_probs=83.3
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (409)
++|+.+-.++.++.++.++.+.. ++|++|+-..++.... .+.++.+++.. +.|+++.+-.. + . .+. .
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g-~~~i~~l~~~~~~~~i~~~l~~~-d-----i-~~~---~ 69 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEG-LSVITAVKKAHPDKIVFADMKTM-D-----A-GEL---E 69 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHC-THHHHHHHHHSTTSEEEEEEEEC-S-----C-HHH---H
T ss_pred eEEEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhC-HHHHHHHHHhCCCCeEEEEEEec-C-----c-cHH---H
Confidence 58899999999999998888755 8999999776542222 23567777665 78999866532 1 1 233 3
Q ss_pred HHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 91 LHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 91 l~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
.+.+.+.|+|+|=+-.....+.++.++ ..++.+.++-+|.|.. .|| ++ .++.+.+.|+|++|+.
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~-~~p--~~---~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGI-EDK--AT---RAQEVRALGAKFVEMH 134 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTC-SSH--HH---HHHHHHHTTCSEEEEE
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecC-CCh--HH---HHHHHHHhCCCEEEEE
Confidence 367888999999765544433333333 2233466776777732 133 23 2334445689999874
No 82
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=96.00 E-value=0.0094 Score=56.85 Aligned_cols=43 Identities=35% Similarity=0.424 Sum_probs=38.9
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.++||++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 71 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQA 71 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 478899999996 7899999999999999999999999887765
No 83
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=95.99 E-value=0.006 Score=57.71 Aligned_cols=44 Identities=25% Similarity=0.286 Sum_probs=36.2
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
.++||++||.|+ ||.|++++..|.+.|++|++++|+.++.++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 74 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA 74 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 567899999995 88999999999999999999999998877653
No 84
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.99 E-value=0.0071 Score=54.97 Aligned_cols=42 Identities=21% Similarity=0.244 Sum_probs=36.8
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
...++.|+|+|.+|++++..|.+.|.+|++++|+.++++.+.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~ 68 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF 68 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 346899999999999999999999999999999999887653
No 85
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=95.98 E-value=0.0093 Score=56.16 Aligned_cols=43 Identities=37% Similarity=0.500 Sum_probs=38.3
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
++++|+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~ 69 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADT 69 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467899999996 8899999999999999999999998877654
No 86
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=95.98 E-value=0.009 Score=56.19 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=38.3
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.++||++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 67 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTA 67 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 478999999996 7899999999999999999999998876654
No 87
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=95.98 E-value=0.0066 Score=57.33 Aligned_cols=44 Identities=32% Similarity=0.417 Sum_probs=38.7
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
+++||++||.|+ ||.|++++..|.+.|++|++++|+.+++++++
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 70 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA 70 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 478999999985 78999999999999999999999998877653
No 88
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.98 E-value=0.045 Score=49.16 Aligned_cols=130 Identities=19% Similarity=0.214 Sum_probs=87.1
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecC-CCCCCChhHHHHHHhc-CCCcEEEEeccCCCCCCCCCCHHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC-INNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~-l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (409)
++++.+-.++.++.++.++.+. .++|++|.=..+ +.. . .+.++.+++. .+.|+.++.-.. .| . ++
T Consensus 2 ~li~a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~-g-~~~i~~ir~~~~~~~i~~~~~~~-~~------~-~~-- 68 (211)
T 3f4w_A 2 KLQLALDELTLPEAMVFMDKVV-DDVDIIEVGTPFLIRE-G-VNAIKAIKEKYPHKEVLADAKIM-DG------G-HF-- 68 (211)
T ss_dssp EEEEEECSCCHHHHHHHHHHHG-GGCSEEEECHHHHHHH-T-THHHHHHHHHCTTSEEEEEEEEC-SC------H-HH--
T ss_pred cEEEEeCCCCHHHHHHHHHHhh-cCccEEEeCcHHHHhc-c-HHHHHHHHHhCCCCEEEEEEEec-cc------h-HH--
Confidence 5889999999999999888874 689999987644 221 1 2467777766 588987765443 11 1 22
Q ss_pred HHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 90 ALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 90 ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
.++.+.+.|+|+|=+=....++.+++++ ..++.+.++++..++ | ++..+.++++.+.|+|++.+-
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~----~--~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMIC----V--DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTT----C--SSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecC----C--CCHHHHHHHHHHcCCCEEEEc
Confidence 3678889999999886544433334444 344567888886443 2 123556677778899998653
No 89
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.98 E-value=0.0093 Score=55.26 Aligned_cols=40 Identities=25% Similarity=0.265 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.++++.|||+|.+|.+++..|.+.|.+|++++|++++
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 3566889999999999999999999999999999999987
No 90
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.96 E-value=0.099 Score=48.02 Aligned_cols=120 Identities=20% Similarity=0.240 Sum_probs=69.7
Q ss_pred EEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 015310 13 ICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (409)
Q Consensus 13 icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (409)
|+.-+...+.+++...++.+.+.|++++|+|.. .....+.++.+.+..+ .+++-. |.. .+. +-.+
T Consensus 28 ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k---~~~~~~~i~~l~~~~~-~~~iga------gtv-l~~----d~~~ 92 (225)
T 1mxs_A 28 ILPVITIAREEDILPLADALAAGGIRTLEVTLR---SQHGLKAIQVLREQRP-ELCVGA------GTV-LDR----SMFA 92 (225)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEESS---STHHHHHHHHHHHHCT-TSEEEE------ECC-CSH----HHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecC---CccHHHHHHHHHHhCc-ccEEee------CeE-eeH----HHHH
Confidence 445556778898988899999999999999953 2222334444554442 222211 221 233 2345
Q ss_pred HHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015310 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 93 ~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~ 163 (409)
.+++.|+|+|=.- ..+.+..+ ..+..+..+|...| || +| +.++.+.|+|++|+ .|
T Consensus 93 ~A~~aGAd~v~~p-~~d~~v~~---~~~~~g~~~i~G~~----t~--~e----~~~A~~~Gad~vk~--FP 147 (225)
T 1mxs_A 93 AVEAAGAQFVVTP-GITEDILE---AGVDSEIPLLPGIS----TP--SE----IMMGYALGYRRFKL--FP 147 (225)
T ss_dssp HHHHHTCSSEECS-SCCHHHHH---HHHHCSSCEECEEC----SH--HH----HHHHHTTTCCEEEE--TT
T ss_pred HHHHCCCCEEEeC-CCCHHHHH---HHHHhCCCEEEeeC----CH--HH----HHHHHHCCCCEEEE--cc
Confidence 6788899998432 11111111 22334566665555 34 33 35566889999999 55
No 91
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.95 E-value=0.0077 Score=60.30 Aligned_cols=42 Identities=33% Similarity=0.264 Sum_probs=37.8
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
+.+++|+|+|+|++|++++..+..+|++|++++|+.++.+.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 468899999999999999999999999999999998876543
No 92
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=95.95 E-value=0.0082 Score=56.26 Aligned_cols=45 Identities=29% Similarity=0.358 Sum_probs=39.9
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
..++||++||.|+ ||.|++++..|.+.|++|++++|+.++.++++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 68 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA 68 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4578999999986 78999999999999999999999998887653
No 93
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=95.95 E-value=0.0076 Score=56.34 Aligned_cols=44 Identities=27% Similarity=0.348 Sum_probs=39.2
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|++||-|+ ||.|++++..|.+.|++|++++|+.++++++
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 60 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAA 60 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4578999999985 8899999999999999999999998887664
No 94
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.95 E-value=0.039 Score=54.80 Aligned_cols=112 Identities=14% Similarity=0.205 Sum_probs=70.3
Q ss_pred cCCCceEeecCcccHHHHHHHhc--CCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEEeCCCCeEEEEcCcHHH
Q 015310 264 VNYNGIYVPMFVDDLKKFFSTYS--SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEA 341 (409)
Q Consensus 264 ~gl~~~y~~~~~~~l~~~~~~~~--~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G 341 (409)
-|+|..=..+++.+.++|++.++ .+.|.|+|.-==-....+..++++-.. .... =+|-|-.|
T Consensus 107 agid~~pi~ldv~~~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r~r~~----~~Ip------------vf~DDiqG 170 (388)
T 1vl6_A 107 ADIDAFPICLSESEEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEE----MNIP------------VFHDDQQG 170 (388)
T ss_dssp HCCEEEEEECSCCCHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHH----CSSC------------EEEHHHHH
T ss_pred cCCceEeEEeCCCCHHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHHhhhh----cCcc------------eecccccc
Confidence 46774444456677888876663 367888865331123344444433322 1111 13344433
Q ss_pred --------HHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC----hHHH
Q 015310 342 --------SITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID----FEQS 404 (409)
Q Consensus 342 --------~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~----~~ka 404 (409)
++.+++ +. +..++..+++|+|||-+|.+++..|..+|+ +|+++||+ .+|+
T Consensus 171 TasV~lAal~~A~~--i~-----------g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~ 233 (388)
T 1vl6_A 171 TAVVVSAAFLNALK--LT-----------EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDP 233 (388)
T ss_dssp HHHHHHHHHHHHHH--HH-----------TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSG
T ss_pred HHHHHHHHHHHHHH--Hh-----------CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCc
Confidence 233332 11 235778899999999999999999999999 89999998 6654
No 95
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.94 E-value=0.022 Score=56.12 Aligned_cols=56 Identities=29% Similarity=0.452 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCC-CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGS-PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
++|.+..++..+.+.+ . +++||++.|.|.|.+|+.++..|..+|++|.+++++.++
T Consensus 154 g~Gv~~~~~~~~~~~G---------~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 154 AVGVFEAMKATVAHRG---------LGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp HHHHHHHHHHHHHHTT---------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred HHHHHHHHHHHHHhcC---------CCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 4677777777665322 4 689999999999999999999999999998899998765
No 96
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=95.94 E-value=0.01 Score=55.72 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=38.0
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 62 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT 62 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467899999985 8899999999999999999999998876654
No 97
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.90 E-value=0.011 Score=55.52 Aligned_cols=43 Identities=28% Similarity=0.319 Sum_probs=38.1
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 72 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEEL 72 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 367899999985 8899999999999999999999998877654
No 98
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=95.89 E-value=0.0065 Score=57.14 Aligned_cols=44 Identities=34% Similarity=0.460 Sum_probs=39.4
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++||++||-|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~ 66 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQT 66 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3578999999986 8899999999999999999999999887765
No 99
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=95.88 E-value=0.0063 Score=57.36 Aligned_cols=43 Identities=28% Similarity=0.469 Sum_probs=38.3
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
+++||+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 73 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAV 73 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 478999999985 8899999999999999999999998776654
No 100
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=95.87 E-value=0.0085 Score=56.28 Aligned_cols=43 Identities=28% Similarity=0.341 Sum_probs=38.6
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++|++||-|+ ||.|++++..|++.|++|++++|+.++++++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 68 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGI 68 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 478899999986 8899999999999999999999999887765
No 101
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=95.86 E-value=0.0081 Score=57.28 Aligned_cols=44 Identities=23% Similarity=0.265 Sum_probs=39.0
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 81 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSV 81 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 4578899999986 7899999999999999999999998887654
No 102
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=95.84 E-value=0.012 Score=55.74 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=37.8
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
.+++|.+||.|+ ||.|++++..|++.|++|++++|+.++.++++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 69 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA 69 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 356899999985 88999999999999999999999998877653
No 103
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.82 E-value=0.011 Score=55.63 Aligned_cols=42 Identities=21% Similarity=0.152 Sum_probs=35.8
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
+++|++||-|+ ||.|++++..|++.|++|++++|+.++++++
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 64 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAA 64 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56899999996 8899999999999999999999999887765
No 104
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.81 E-value=0.02 Score=57.68 Aligned_cols=42 Identities=26% Similarity=0.379 Sum_probs=38.3
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
..+.|++++|+|.|.+|++++..|..+|++|++++|++.++.
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~ 257 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICAL 257 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred ceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhH
Confidence 467899999999999999999999999999999999987653
No 105
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=95.80 E-value=0.013 Score=55.77 Aligned_cols=43 Identities=33% Similarity=0.358 Sum_probs=38.2
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~ 74 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRG 74 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 577899999995 8899999999999999999999998876654
No 106
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.78 E-value=0.014 Score=54.65 Aligned_cols=44 Identities=23% Similarity=0.411 Sum_probs=38.7
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 71 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET 71 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHH
Confidence 3578899999985 7899999999999999999999998877654
No 107
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=95.76 E-value=0.014 Score=55.17 Aligned_cols=44 Identities=20% Similarity=0.323 Sum_probs=38.6
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~ 66 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKAT 66 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3578899999996 7899999999999999999999998876654
No 108
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=95.70 E-value=0.0099 Score=55.93 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=37.0
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
.+.+|++||.|+ ||.|++++..|.+.|++|++++|+.++.++++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 69 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA 69 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 356889999986 78999999999999999999999998877653
No 109
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=95.69 E-value=0.011 Score=55.66 Aligned_cols=43 Identities=30% Similarity=0.443 Sum_probs=38.4
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++++++|.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 68 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKV 68 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 367899999997 8899999999999999999999998877654
No 110
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.67 E-value=0.011 Score=56.37 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=38.0
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~ 66 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEET 66 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 367899999985 8899999999999999999999998877654
No 111
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=95.56 E-value=0.16 Score=46.61 Aligned_cols=108 Identities=10% Similarity=0.143 Sum_probs=69.6
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-cC--CCCCCC-hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DC--INNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D~--l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (409)
+|+-+|..-+...+.++++.+.+.|+|++|+|+ |- ..+.+. .+.++.+++.++.|+.+.+=.. +++.|
T Consensus 6 ~i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~--------dp~~~ 77 (230)
T 1tqj_A 6 VVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIV--------EPEKY 77 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESS--------SGGGT
T ss_pred EEEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEcc--------CHHHH
Confidence 589999999999999999998888999999998 21 112221 2466777776778888777652 12333
Q ss_pred HHHHHHHHHcCCcEEEEecc--CccchHHHHHhccCCCcEEEEec
Q 015310 88 LEALHLAEDLGADYVDFELK--VASNILGKQYSSHQSGTRFIVSC 130 (409)
Q Consensus 88 ~~ll~~~~~~g~dyvDiEl~--~~~~~~~~l~~~~~~~~kiI~S~ 130 (409)
++.+.+.|+|+|=+=.. ..+...+.+...++.+.++.+|.
T Consensus 78 ---i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~ 119 (230)
T 1tqj_A 78 ---VEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVL 119 (230)
T ss_dssp ---HHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEE
T ss_pred ---HHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEE
Confidence 35667778888766544 22222221222334566666666
No 112
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.55 E-value=0.011 Score=58.62 Aligned_cols=42 Identities=24% Similarity=0.228 Sum_probs=37.9
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
+.+++|+|+|+|.+|+.++..+..+|++|++++|+.++.+.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 223 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV 223 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467899999999999999999999999999999998876554
No 113
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=95.53 E-value=0.58 Score=45.54 Aligned_cols=196 Identities=14% Similarity=0.130 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEE-------ecCC---CCCCChhHHHHHHhc-CCCcEEEE-eccCCCCCCCCCCHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIR-------LDCI---NNFQPGKDLEIILTK-KPLPVLIV-YRPKWAGGLYEGDEHKRL 88 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElR-------lD~l---~~~~~~~~l~~l~~~-~~~PiI~T-~R~~~eGG~~~~~~~~~~ 88 (409)
+.++.++-++.+.+.|+|.||+= .|.- ...++.+.++.+++. .+.|+.+- ++. . .. .
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~--~-----~~----~ 96 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPG--I-----GS----V 96 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBT--T-----BC----H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCC--c-----cc----H
Confidence 44666666777777899999983 1211 111234556566554 35565543 431 1 11 2
Q ss_pred HHHHHHHHcCCcEEEEeccCcc-chHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec--C
Q 015310 89 EALHLAEDLGADYVDFELKVAS-NILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV--N 164 (409)
Q Consensus 89 ~ll~~~~~~g~dyvDiEl~~~~-~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~--~ 164 (409)
+.++.+.+.|++.|-|=....+ +...+.+ .+++.+..++.+.=+...++ .+.+.++.+.+.++|++++-++=+. .
T Consensus 97 ~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~-~e~~~~ia~~~~~~Ga~~i~l~DT~G~~ 175 (345)
T 1nvm_A 97 HDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIP-AEKLAEQGKLMESYGATCIYMADSGGAM 175 (345)
T ss_dssp HHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSC-HHHHHHHHHHHHHHTCSEEEEECTTCCC
T ss_pred HHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCC-HHHHHHHHHHHHHCCCCEEEECCCcCcc
Confidence 4678888899998877543321 2223333 34556888888876654443 5789999999999999998888433 3
Q ss_pred CHhHHHHHHHHhcc-C--CCCEEEE------EcCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhhhc
Q 015310 165 DITEIARIFQLLSH-C--QVPIIAY------SVGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVE 232 (409)
Q Consensus 165 ~~~D~~~ll~~~~~-~--~~p~i~~------~MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~~~ 232 (409)
++.++.++++.+.+ . +.| |.+ +||- ..-+..-..|....=+++.. +-..||++++++...++..
T Consensus 176 ~P~~v~~lv~~l~~~~~~~~p-i~~H~Hn~~G~av---An~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~~ 249 (345)
T 1nvm_A 176 SMNDIRDRMRAFKAVLKPETQ-VGMHAHHNLSLGV---ANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAERL 249 (345)
T ss_dssp CHHHHHHHHHHHHHHSCTTSE-EEEECBCTTSCHH---HHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCce-EEEEECCCccHHH---HHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHHHhc
Confidence 58888888877654 3 344 455 4443 33333333443333333322 2357999999998777643
No 114
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.47 E-value=0.032 Score=56.49 Aligned_cols=42 Identities=31% Similarity=0.449 Sum_probs=38.4
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
..+.||+++|+|.|..|++++..|..+|++|++++|++.++.
T Consensus 243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~ 284 (464)
T 3n58_A 243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICAL 284 (464)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 568899999999999999999999999999999999987653
No 115
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=95.45 E-value=0.019 Score=54.50 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=36.5
Q ss_pred CCCCCCEEEEEech---hHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGAG---GAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGaG---Gaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
..+++|++||.|++ |.|++++..|++.|++|++++|+.+..+
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~ 70 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK 70 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 35789999999985 9999999999999999999999965433
No 116
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.43 E-value=0.067 Score=48.59 Aligned_cols=130 Identities=12% Similarity=0.043 Sum_probs=80.9
Q ss_pred CeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhc-CCCcEEEEeccCCCCCCCCCCHHHHH
Q 015310 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRL 88 (409)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~ 88 (409)
++++|+.+-.++.++.++.++.. ..++|++|+-+-+.-... .+.++.+++. .+.|+++-+-.- +. .+.
T Consensus 6 ~~~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G-~~~i~~lr~~~~~~~i~ld~~l~-d~------p~~-- 74 (218)
T 3jr2_A 6 KPMIQIALDQTNLTDAVAVASNV-ASYVDVIEVGTILAFAEG-MKAVSTLRHNHPNHILVCDMKTT-DG------GAI-- 74 (218)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHH-GGGCSEEEECHHHHHHHT-THHHHHHHHHCTTSEEEEEEEEC-SC------HHH--
T ss_pred CCCeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCcHHHHhcC-HHHHHHHHHhCCCCcEEEEEeec-cc------HHH--
Confidence 68899999999999999988885 668999998754432112 2357777766 467887765433 21 222
Q ss_pred HHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEE-eccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 89 EALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIV-SCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 89 ~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~-S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
..+.+.+.|+|+|=+-....++.+++++ ..++.+.+.++ -.-- .|| +++.+ +.+.|+|.+++
T Consensus 75 -~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~--~T~--~~~~~----~~~~g~d~v~~ 138 (218)
T 3jr2_A 75 -LSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGN--WTM--QDAKA----WVDLGITQAIY 138 (218)
T ss_dssp -HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSS--CCH--HHHHH----HHHTTCCEEEE
T ss_pred -HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeec--CCH--HHHHH----HHHcCccceee
Confidence 4477888999999887655443333333 23445666654 2111 233 33333 33458887776
No 117
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=95.39 E-value=0.021 Score=53.79 Aligned_cols=43 Identities=21% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeC-ChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI-DFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR-~~~ka~~l 407 (409)
++.+|++||-|+ ||.|++++..|++.|++|++++| +.++.+++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~ 66 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTV 66 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH
Confidence 577899999985 88999999999999999999999 55555543
No 118
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.39 E-value=0.16 Score=46.85 Aligned_cols=123 Identities=15% Similarity=0.212 Sum_probs=76.8
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (409)
.|+-.+...+.+++..-++.+...|++++|+|+.-- +..+.++.+++..+..+|= . |.. .+. +-.
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~---~a~e~I~~l~~~~~~~~iG-a-----GTV--lt~----~~a 99 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSD---AAVEAIRLLRQAQPEMLIG-A-----GTI--LNG----EQA 99 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTST---THHHHHHHHHHHCTTCEEE-E-----ECC--CSH----HHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCC---CHHHHHHHHHHhCCCCEEe-E-----CCc--CCH----HHH
Confidence 455667888899999999999999999999998632 2234566666555434442 1 222 222 234
Q ss_pred HHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC
Q 015310 92 HLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165 (409)
Q Consensus 92 ~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~ 165 (409)
+.+++.|+++|=.- ....+..+ ..++.+..+|--.. ||+ | +.++.++|+|++|+ +|.+
T Consensus 100 ~~Ai~AGA~fIvsP-~~~~~vi~---~~~~~gi~~ipGv~----Tpt--E----i~~A~~~Gad~vK~--FPa~ 157 (232)
T 4e38_A 100 LAAKEAGATFVVSP-GFNPNTVR---ACQEIGIDIVPGVN----NPS--T----VEAALEMGLTTLKF--FPAE 157 (232)
T ss_dssp HHHHHHTCSEEECS-SCCHHHHH---HHHHHTCEEECEEC----SHH--H----HHHHHHTTCCEEEE--CSTT
T ss_pred HHHHHcCCCEEEeC-CCCHHHHH---HHHHcCCCEEcCCC----CHH--H----HHHHHHcCCCEEEE--CcCc
Confidence 57788999998421 11222222 23445788877654 553 3 34456889999998 5544
No 119
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=95.33 E-value=0.012 Score=55.49 Aligned_cols=44 Identities=34% Similarity=0.396 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCCh-HHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF-EQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~-~ka~~l 407 (409)
..+++|++||.|+ ||.|++++..|.+.|++|++++|+. ++.+++
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~ 64 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSL 64 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHH
Confidence 3567899999985 8899999999999999999999998 666544
No 120
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.32 E-value=0.011 Score=61.90 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=33.4
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCCh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~ 401 (409)
+++++|+|+|+||.|..++..|+..|+ +|+|++++.
T Consensus 324 L~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 324 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 567899999999999999999999999 999999874
No 121
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.31 E-value=0.015 Score=51.54 Aligned_cols=41 Identities=27% Similarity=0.277 Sum_probs=36.2
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.| +||.|++++..+...|++|++++|+.++.+.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999 59999999999999999999999998876544
No 122
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.30 E-value=0.014 Score=53.13 Aligned_cols=40 Identities=20% Similarity=0.173 Sum_probs=36.6
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEE-EeCChHHHHhhh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVI-FDIDFEQSLLLL 408 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v-~nR~~~ka~~la 408 (409)
.++.|||+|.+|.+++..|.+.|.+|++ ++|+.++++.++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~ 64 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVT 64 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHH
Confidence 5799999999999999999999998888 999999988764
No 123
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=95.30 E-value=0.88 Score=46.21 Aligned_cols=209 Identities=13% Similarity=0.075 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEE----ecC---CCCCCChhHHHHHHhc-CCCcEEEEeccCCCCCCCCCCHHHHHHHHHHH
Q 015310 23 EQVLSNMYQAKAEGADVVEIR----LDC---INNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLA 94 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElR----lD~---l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~ 94 (409)
++.++-++.+.+.|.|.+|.- .|. +-..++.+.++.+++. .+.++..-+|..+-=|.....++-..+.++.+
T Consensus 30 ~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 30 DDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp GGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHH
Confidence 444444555566799999986 231 1123445566666653 35666666886655565555665566778899
Q ss_pred HHcCCcEEEEeccCcc-chHHHHH-hccCCCcEEEEeccCCCCCC-CHhHHHHHHHHHHHcCCCEEEEEeecC--CHhHH
Q 015310 95 EDLGADYVDFELKVAS-NILGKQY-SSHQSGTRFIVSCNLDCETP-SEEDLGYLVSRMQATGADIIKLVFSVN--DITEI 169 (409)
Q Consensus 95 ~~~g~dyvDiEl~~~~-~~~~~l~-~~~~~~~kiI~S~H~f~~tp-~~~~l~~~~~~~~~~gaDivKia~~~~--~~~D~ 169 (409)
.+.|++.|-|=....+ +.+...+ .+++.+.++.++.|.+..++ +.+.+.+.++++.+.|||++-|+=|.- ++.++
T Consensus 110 ~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v 189 (464)
T 2nx9_A 110 VKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAA 189 (464)
T ss_dssp HHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHH
T ss_pred HhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHH
Confidence 9999999887544322 2222333 45667888888888766666 557799999999999999998875443 58888
Q ss_pred HHHHHHhcc-CCCCEEEEE---cCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhhhc
Q 015310 170 ARIFQLLSH-CQVPIIAYS---VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKVE 232 (409)
Q Consensus 170 ~~ll~~~~~-~~~p~i~~~---MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~~~ 232 (409)
.++.+.+.+ .+.|+ .+- ..-++..+=+..-..|....=+++.. +--.||.+++++...++..
T Consensus 190 ~~lv~~l~~~~~~~i-~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~gertGN~~lE~lv~~L~~~ 256 (464)
T 2nx9_A 190 EELVSTLKKQVDVEL-HLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQGT 256 (464)
T ss_dssp HHHHHHHHHHCCSCE-EEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCeE-EEEECCCCChHHHHHHHHHHhCCCEEEEeccccCCCCcCHHHHHHHHHHHhc
Confidence 887777543 35553 332 23333333333333344333333321 1237999999988777653
No 124
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.27 E-value=0.43 Score=43.33 Aligned_cols=85 Identities=12% Similarity=0.189 Sum_probs=56.9
Q ss_pred eeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-c--CCCCCCC-hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHH
Q 015310 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-D--CINNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK 86 (409)
Q Consensus 11 ~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D--~l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~ 86 (409)
.+|+-.|..-+.+++.+.++.+.+.|+|++|+|+ | +..+... .+.++++++.++.|+.+.+--. +.+
T Consensus 11 ~~i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn--------d~~- 81 (230)
T 1rpx_A 11 IIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV--------EPD- 81 (230)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS--------SHH-
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec--------CHH-
Confidence 3577788999998888888888888999999997 4 2232221 2456677666677877766321 233
Q ss_pred HHHHHHHHHHcCCcEEEEec
Q 015310 87 RLEALHLAEDLGADYVDFEL 106 (409)
Q Consensus 87 ~~~ll~~~~~~g~dyvDiEl 106 (409)
+.++.+.+.|+|+|=+=.
T Consensus 82 --~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 82 --QRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp --HHHHHHHHTTCSEEEEEC
T ss_pred --HHHHHHHHcCCCEEEEEe
Confidence 344556778888875443
No 125
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=95.26 E-value=0.02 Score=53.82 Aligned_cols=44 Identities=16% Similarity=0.127 Sum_probs=37.9
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+.++.+++
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 84 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV 84 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 3467899999986 7899999999999999999999998876654
No 126
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.24 E-value=0.32 Score=46.18 Aligned_cols=149 Identities=17% Similarity=0.175 Sum_probs=91.4
Q ss_pred EeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCC-CCCCh-hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHH---HHH
Q 015310 15 APLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN-NFQPG-KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK---RLE 89 (409)
Q Consensus 15 v~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~-~~~~~-~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~---~~~ 89 (409)
+=+...+.+++. .+.+.|||.|||+-.+.. ...|. ..++.+++..++|+-+-+|+. ||-|-.+++| ..+
T Consensus 42 lEvc~~s~~~a~----~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPR--gGdF~Ys~~E~~~M~~ 115 (287)
T 3iwp_A 42 MEVCVDSVESAV----NAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPR--GGDFLYSDREIEVMKA 115 (287)
T ss_dssp EEEEESSHHHHH----HHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSS--SSCSCCCHHHHHHHHH
T ss_pred EEEEeCCHHHHH----HHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecC--CCCcccCHHHHHHHHH
Confidence 344456666654 445679999999955433 33332 356666667799999999975 6666667644 344
Q ss_pred HHHHHHHcCCcEEEEecc-----CccchHHHHHhccCCCcEEEEeccC-CCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015310 90 ALHLAEDLGADYVDFELK-----VASNILGKQYSSHQSGTRFIVSCNL-DCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 90 ll~~~~~~g~dyvDiEl~-----~~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~~l~~~~~~~~~~gaDivKia~~~ 163 (409)
-++.+.+.|+|.|=+=.- .+.+..++|+... ++. =++||- |+.+++.. +-++...++|.|-|=-.-..
T Consensus 116 dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a-~~l--~vTFHRAFD~~~d~~---~Ale~Li~lGvdrILTSG~~ 189 (287)
T 3iwp_A 116 DIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAIC-RPL--PVTFHRAFDMVHDPM---AALETLLTLGFERVLTSGCD 189 (287)
T ss_dssp HHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHH-TTS--CEEECGGGGGCSCHH---HHHHHHHHHTCSEEEECTTS
T ss_pred HHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHc-CCC--cEEEECchhccCCHH---HHHHHHHHcCCCEEECCCCC
Confidence 556778889999877531 2334556666432 233 357886 88887654 44556666687655444433
Q ss_pred CCHhHHHHHHHH
Q 015310 164 NDITEIARIFQL 175 (409)
Q Consensus 164 ~~~~D~~~ll~~ 175 (409)
.+..+-+.+++-
T Consensus 190 ~~a~~Gl~~Lk~ 201 (287)
T 3iwp_A 190 SSALEGLPLIKR 201 (287)
T ss_dssp SSTTTTHHHHHH
T ss_pred CChHHhHHHHHH
Confidence 444444444443
No 127
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.22 E-value=0.033 Score=52.75 Aligned_cols=40 Identities=30% Similarity=0.521 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..++||++||.|+ ||.|++++..|.+.|++|++++|+.++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 83 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG 83 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 3578999999996 889999999999999999999998654
No 128
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=95.14 E-value=0.014 Score=54.38 Aligned_cols=42 Identities=24% Similarity=0.246 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
.++++|++||.|+ ||.|++++..|.+.|++|++++|+.++..
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV 65 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 4567899999996 88999999999999999999999976643
No 129
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.14 E-value=0.011 Score=58.15 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=32.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~ 401 (409)
++++|+|+|+||.|..++..|+..|+ +|+|++++.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 46799999999999999999999999 999999874
No 130
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=95.11 E-value=0.023 Score=53.19 Aligned_cols=44 Identities=30% Similarity=0.433 Sum_probs=36.6
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeC-ChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI-DFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR-~~~ka~~l 407 (409)
.++++|++||.|+ ||.|++++..|.+.|++|++..| +.++.+++
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~ 69 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEV 69 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH
Confidence 3578899999986 88999999999999999988888 66655544
No 131
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.08 E-value=0.02 Score=52.64 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
.+++|++|||+|+|.+|...+..|.+.|++|+|++.+..
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 468899999999999999999999999999999998653
No 132
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=95.08 E-value=0.024 Score=52.47 Aligned_cols=44 Identities=34% Similarity=0.465 Sum_probs=37.3
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeC-ChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI-DFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR-~~~ka~~l 407 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.| +.++.+++
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~ 62 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV 62 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH
Confidence 4578899999996 78999999999999999999999 77665543
No 133
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=95.08 E-value=0.024 Score=52.93 Aligned_cols=43 Identities=26% Similarity=0.262 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCC-hHHHHh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID-FEQSLL 406 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~-~~ka~~ 406 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|+++.|+ .++.+.
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 69 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADA 69 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 4578999999986 889999999999999999999994 444443
No 134
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=95.03 E-value=0.02 Score=53.74 Aligned_cols=42 Identities=24% Similarity=0.244 Sum_probs=36.0
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.++ |++||.|+ ||.|++++..|.+.|++|++++|+.++.+++
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~ 61 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL 61 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 455 88999986 7899999999999999999999998887665
No 135
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=95.02 E-value=0.73 Score=42.04 Aligned_cols=143 Identities=19% Similarity=0.157 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
.+.+++.+.++++.+.+++.| +..... .....+.++..+++ +.|+=.-+.|- .+.+.+..-.+.|++.|+
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aV-----cv~p~~-v~~~~~~l~~~~v~-v~~vigFP~G~---~~~~~k~~e~~~Ai~~GA 85 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGL-----CIPPSY-VAWVRARYPHAPFR-LVTVVGFPLGY---QEKEVKALEAALACARGA 85 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEE-----ECCGGG-HHHHHHHCTTCSSE-EEEEESTTTCC---SCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEE-----EECHHH-HHHHHHHhCCCCce-EEEEecCCCCC---CchHHHHHHHHHHHHcCC
Confidence 467888888888888888888 222111 11222233333444 34442333333 234556666789999999
Q ss_pred cEEEEeccCcc----------chHHHHHh-ccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe----ecC
Q 015310 100 DYVDFELKVAS----------NILGKQYS-SHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF----SVN 164 (409)
Q Consensus 100 dyvDiEl~~~~----------~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~----~~~ 164 (409)
|-||+=++... +.+..+.. .++...|+|+-.-. ++.+++....+-+.+.|||++|--+ -..
T Consensus 86 devd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~----l~~e~i~~a~~ia~eaGADfVKTsTGf~~~ga 161 (220)
T 1ub3_A 86 DEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY----FSPEEIARLAEAAIRGGADFLKTSTGFGPRGA 161 (220)
T ss_dssp SEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG----SCHHHHHHHHHHHHHHTCSEEECCCSSSSCCC
T ss_pred CEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC----CCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCC
Confidence 99999766531 12233332 34457888876543 3467888888889999999999884 233
Q ss_pred CHhHHHHHHHHh
Q 015310 165 DITEIARIFQLL 176 (409)
Q Consensus 165 ~~~D~~~ll~~~ 176 (409)
+.+|+..+.+..
T Consensus 162 t~~dv~~m~~~v 173 (220)
T 1ub3_A 162 SLEDVALLVRVA 173 (220)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHhh
Confidence 778887666554
No 136
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=95.02 E-value=0.034 Score=52.77 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~ 400 (409)
..++||++||.|+ ||.|++++..|++.|++|++++|+
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 3578999999996 789999999999999999999887
No 137
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=95.01 E-value=0.023 Score=54.97 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=36.7
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEe-CChHHHHhh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFD-IDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~n-R~~~ka~~l 407 (409)
+++|++||.|+ ||.|++++..|++.|++|++++ |+.++++++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~ 87 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL 87 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 67899999985 8899999999999999999999 998877654
No 138
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.01 E-value=0.031 Score=53.62 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=38.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
+..++.|||+|-+|++++..|.+.|.+|+++||+.++++.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~ 61 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV 61 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 446899999999999999999999999999999999988764
No 139
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.00 E-value=0.048 Score=55.01 Aligned_cols=42 Identities=31% Similarity=0.481 Sum_probs=38.6
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
..+.|++++|+|.|.+|++++..|..+|++|+++++++.++.
T Consensus 207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~ 248 (436)
T 3h9u_A 207 VMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINAL 248 (436)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhH
Confidence 567899999999999999999999999999999999987764
No 140
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.99 E-value=0.036 Score=52.18 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=36.3
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeC-ChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI-DFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR-~~~ka~~l 407 (409)
.+++|++||.|+ ||.|++++..|.+.|++|++++| +.++.+++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~ 70 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV 70 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 467899999996 88999999999999999999885 76665544
No 141
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=94.95 E-value=0.018 Score=53.54 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..+++|+++|.|+ ||.|++++..|.+.|++|++++|+.++.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 58 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP 58 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh
Confidence 4577899999996 8899999999999999999999986654
No 142
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.93 E-value=0.035 Score=52.02 Aligned_cols=44 Identities=27% Similarity=0.359 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeC-ChHHHHhh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI-DFEQSLLL 407 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR-~~~ka~~l 407 (409)
..+++|++||.|+ ||.|++++..|++.|++|+++.| +.++.+++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~ 72 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV 72 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 3578999999996 78999999999999999888754 45555543
No 143
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=94.92 E-value=0.023 Score=54.93 Aligned_cols=40 Identities=25% Similarity=0.280 Sum_probs=34.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhC-CC-eEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSR-GA-RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~-G~-~i~v~nR~~~ka~~la 408 (409)
..++++|+|+|++|++.+.+|... +. +|+|+||+ ++++++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la 161 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEIL 161 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHH
Confidence 357999999999999999999874 66 89999999 776664
No 144
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.92 E-value=0.033 Score=54.84 Aligned_cols=42 Identities=17% Similarity=0.305 Sum_probs=38.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
++.++.|||.|-+|++++..|.+.|.+|+++||+.++++.+.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~ 62 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALE 62 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 467899999999999999999999999999999999988764
No 145
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.86 E-value=0.031 Score=57.38 Aligned_cols=42 Identities=31% Similarity=0.502 Sum_probs=38.3
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.+.|++++|+|+|++|+.++..|..+|++|++++|++++++.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~ 312 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQ 312 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 467999999999999999999999999999999999888643
No 146
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.83 E-value=0.15 Score=46.56 Aligned_cols=112 Identities=9% Similarity=0.136 Sum_probs=67.3
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCC-CCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 015310 24 QVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKW-AGGLYEGDEHKRLEALHLAEDLGADYV 102 (409)
Q Consensus 24 e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~-eGG~~~~~~~~~~~ll~~~~~~g~dyv 102 (409)
++.+.++.+.+.|++.++++ . .+.+..+++..++|++-.+|..- +++..-... .+.++.+.+.|+|.|
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~-------~-~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~---~~~i~~~~~~Gad~V 105 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN-------S-VRDIKEIQAITDLPIIGIIKKDYPPQEPFITAT---MTEVDQLAALNIAVI 105 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE-------S-HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCS---HHHHHHHHTTTCSEE
T ss_pred hHHHHHHHHHHCCCcEeecC-------C-HHHHHHHHHhCCCCEEeeEcCCCCccccccCCh---HHHHHHHHHcCCCEE
Confidence 45555566667899999874 1 24677787778999975555432 333322222 233556788899999
Q ss_pred EEeccCc--------cchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEE
Q 015310 103 DFELKVA--------SNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADII 157 (409)
Q Consensus 103 DiEl~~~--------~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDiv 157 (409)
.+..... .+.++.+.... ++..++++.|+ + ++ ..++.+.|+|++
T Consensus 106 ~l~~~~~~~~~~~~~~~~i~~i~~~~-~~~~v~~~~~t----~--~e----a~~a~~~Gad~i 157 (234)
T 1yxy_A 106 AMDCTKRDRHDGLDIASFIRQVKEKY-PNQLLMADIST----F--DE----GLVAHQAGIDFV 157 (234)
T ss_dssp EEECCSSCCTTCCCHHHHHHHHHHHC-TTCEEEEECSS----H--HH----HHHHHHTTCSEE
T ss_pred EEcccccCCCCCccHHHHHHHHHHhC-CCCeEEEeCCC----H--HH----HHHHHHcCCCEE
Confidence 8866532 12333333221 36677777763 2 22 556667888887
No 147
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=94.81 E-value=0.021 Score=54.07 Aligned_cols=43 Identities=23% Similarity=0.341 Sum_probs=38.0
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCC---eEEEEeCChHHHHhhh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGA---RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~---~i~v~nR~~~ka~~la 408 (409)
+++|++||.|+ ||.|++++..|.+.|+ +|++++|+.++.++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~ 77 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK 77 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH
Confidence 56899999996 8899999999999887 9999999998887653
No 148
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.80 E-value=0.038 Score=52.47 Aligned_cols=122 Identities=21% Similarity=0.302 Sum_probs=77.6
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEEeCCCCeE
Q 015310 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKL 332 (409)
Q Consensus 258 n~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~~~~~g~l 332 (409)
.+..++.|+......++- +++.+.++.+ .++++.|+-|-.|.-. ++|+ . +.+.+++--. + -|| +
T Consensus 54 ~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~----~id~---~-~i~~~I~p~K-D-VDG-~ 122 (281)
T 2c2x_A 54 HADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPK----HLDE---N-AALERVDPAK-D-ADG-L 122 (281)
T ss_dssp HHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCT----TSCH---H-HHHHHSCGGG-B-TTS-C
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCC----CCCH---H-HHHhhcCccC-C-ccC-C
Confidence 445788999987766653 3566667667 5789999999999732 1211 1 1111111100 0 011 1
Q ss_pred EEE-------------cCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhH-HHHHHHHHHhC--CCeEEE
Q 015310 333 IGY-------------NTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGA-GRALAFGAKSR--GARVVI 396 (409)
Q Consensus 333 ~G~-------------NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGa-arai~~aL~~~--G~~i~v 396 (409)
+-+ -.--.|++..|++. +.+++|++++|+|+|.+ |+.++.-|... |+.|++
T Consensus 123 ~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~-------------~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv 189 (281)
T 2c2x_A 123 HPTNLGRLVLGTPAPLPCTPRGIVHLLRRY-------------DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTL 189 (281)
T ss_dssp CHHHHHHHHHTCCCCCCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEE
T ss_pred ChhhHHHHhCCCCCCCCChHHHHHHHHHHc-------------CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 100 11235666666542 25789999999999984 99999999999 789999
Q ss_pred EeCChHH
Q 015310 397 FDIDFEQ 403 (409)
Q Consensus 397 ~nR~~~k 403 (409)
++|+...
T Consensus 190 ~h~~t~~ 196 (281)
T 2c2x_A 190 CHTGTRD 196 (281)
T ss_dssp ECTTCSC
T ss_pred EECchhH
Confidence 9887543
No 149
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=94.78 E-value=0.042 Score=52.68 Aligned_cols=124 Identities=18% Similarity=0.252 Sum_probs=77.4
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEEeCCCC--
Q 015310 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDG-- 330 (409)
Q Consensus 258 n~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~~~~~g-- 330 (409)
....+++|+......++- +++.+.+..+ .++.+.|+-|-.|.-..- -+| +. +.+.+++--. + -||
T Consensus 57 ~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~--~id---~~-~i~~~I~p~K-D-VDG~h 128 (301)
T 1a4i_A 57 LKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSEN--SIN---TE-EVINAIAPEK-D-VDGLT 128 (301)
T ss_dssp HHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSS--CCC---HH-HHHHTSCGGG-B-TTCCS
T ss_pred HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCC--ccC---HH-HHHhccCCCC-C-ccCCC
Confidence 345788999987766653 3677777777 578999999999973110 011 11 1111111100 0 011
Q ss_pred -----eE-EEE------cCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHHHhCCCeEEEE
Q 015310 331 -----KL-IGY------NTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKSRGARVVIF 397 (409)
Q Consensus 331 -----~l-~G~------NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL~~~G~~i~v~ 397 (409)
++ .|. -.--.|++..|++. +.+++|++++|+|+|. +|+.++.-|...|+.|+|+
T Consensus 129 p~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~-------------~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~ 195 (301)
T 1a4i_A 129 SINAGRLARGDLNDCFIPCTPKGCLELIKET-------------GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTC 195 (301)
T ss_dssp HHHHHHHHTTCCSSCCCCHHHHHHHHHHHTT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE
T ss_pred hhhHHHHhcCCCCCCccCchHHHHHHHHHHc-------------CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEE
Confidence 00 010 01235666666532 2578999999999997 7999999999999999999
Q ss_pred eCChH
Q 015310 398 DIDFE 402 (409)
Q Consensus 398 nR~~~ 402 (409)
+++..
T Consensus 196 hs~t~ 200 (301)
T 1a4i_A 196 HSKTA 200 (301)
T ss_dssp CTTCS
T ss_pred ECCcc
Confidence 76543
No 150
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.77 E-value=0.09 Score=52.79 Aligned_cols=60 Identities=32% Similarity=0.421 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEE-EEeC----------ChHHHHhh
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI----------DFEQSLLL 407 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~-v~nR----------~~~ka~~l 407 (409)
++|.+..++..+.+.+ .+++|++|+|.|.|.+|+.++..|.++|++|+ |.++ +.++..++
T Consensus 198 g~Gv~~~~~~~~~~~g---------~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~ 268 (419)
T 3aoe_E 198 GLGALLVLEALAKRRG---------LDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHHHHHHT---------CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC---------CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHH
Confidence 4677777777665333 57889999999999999999999999999755 9988 66666554
No 151
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=94.77 E-value=0.017 Score=53.96 Aligned_cols=42 Identities=29% Similarity=0.389 Sum_probs=36.2
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
++++|++||.|+ ||.|++++..|.+.|++|++++|+.++.++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 73 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK 73 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 467899999985 789999999999999999999998765543
No 152
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.76 E-value=0.031 Score=55.89 Aligned_cols=42 Identities=24% Similarity=0.211 Sum_probs=37.5
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
+.+.+|+|+|+|.+|++++..+..+|++|++++|+.++.+.+
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 457899999999999999999999999999999998875543
No 153
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=94.74 E-value=0.037 Score=52.04 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=34.1
Q ss_pred CCCCEEEEEec---hhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 366 LAGRMFVLAGA---GGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 366 ~~~~~vlvlGa---GGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
+++|++||.|+ ||.|++++..|.+.|++|++++|+.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK 58 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 67899999997 69999999999999999999999874
No 154
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=94.73 E-value=0.023 Score=55.60 Aligned_cols=40 Identities=35% Similarity=0.509 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..++||++||.|+ ||.|++++..|++.|++|++++|+.++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 4578999999996 889999999999999999999999764
No 155
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=94.61 E-value=0.024 Score=52.41 Aligned_cols=42 Identities=14% Similarity=0.055 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCC---CeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRG---ARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G---~~i~v~nR~~~ka~ 405 (409)
..++++++||.|+ ||.|++++..|.+.| ++|++++|+.++.+
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~ 62 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK 62 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH
Confidence 4578899999985 889999999999999 89999999976544
No 156
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=94.57 E-value=0.015 Score=54.35 Aligned_cols=41 Identities=29% Similarity=0.496 Sum_probs=35.5
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
.++||++||.|+ ||.|++++..|++.|++|++++|+.++.+
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~ 66 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA 66 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 467899999996 78999999999999999999999876543
No 157
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=94.54 E-value=0.051 Score=51.51 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=34.3
Q ss_pred CCCCCEEEEEec-hh--HHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 365 PLAGRMFVLAGA-GG--AGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 365 ~~~~~~vlvlGa-GG--aarai~~aL~~~G~~i~v~nR~~~k 403 (409)
.+++|++||.|+ || .|++++..|++.|++|++++|+.+.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~ 69 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL 69 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 478999999997 34 9999999999999999999999643
No 158
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=94.53 E-value=0.052 Score=50.86 Aligned_cols=38 Identities=42% Similarity=0.581 Sum_probs=34.0
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..++||++||.|+ ||.|++++..|.+.|++|++++|+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 65 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD 65 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 4578999999996 7899999999999999999999874
No 159
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=94.50 E-value=0.033 Score=53.48 Aligned_cols=36 Identities=47% Similarity=0.781 Sum_probs=33.0
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++||++||.|+ ||.|++++..|.+.|++|++++|+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 477899999985 889999999999999999999987
No 160
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=94.47 E-value=0.027 Score=51.98 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=33.6
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..-+|++||.|+ ||.|++++..|.+.|++|++++|+.++.
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~ 59 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN 59 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc
Confidence 345789999996 7899999999999999999999987654
No 161
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.46 E-value=0.95 Score=44.10 Aligned_cols=92 Identities=14% Similarity=0.154 Sum_probs=65.0
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCC---------C-C-CCh----hHHHHHHhcCCCcEEEEeccCCC
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCIN---------N-F-QPG----KDLEIILTKKPLPVLIVYRPKWA 76 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~---------~-~-~~~----~~l~~l~~~~~~PiI~T~R~~~e 76 (409)
.+++.|.+.+.+++.+.++.+.+.|+|.||+-..+=. . + ... +.++.+++..++|+.+-+|..++
T Consensus 59 p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~ 138 (350)
T 3b0p_A 59 PIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLE 138 (350)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBT
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcC
Confidence 4679999999999999888888889999999985311 0 0 011 22334444468999888886433
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015310 77 GGLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (409)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g~dyvDiEl 106 (409)
- ..+.++..++.+.+.+.|+++|.|.-
T Consensus 139 ~---~~~~~~~~~~a~~l~~aG~d~I~V~~ 165 (350)
T 3b0p_A 139 G---KETYRGLAQSVEAMAEAGVKVFVVHA 165 (350)
T ss_dssp T---CCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred c---cccHHHHHHHHHHHHHcCCCEEEEec
Confidence 1 12345677888888999999999853
No 162
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.44 E-value=0.051 Score=52.26 Aligned_cols=41 Identities=27% Similarity=0.301 Sum_probs=36.6
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.|+ ||.|++++..+...|++|++++|+.++.+.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5789999997 9999999999999999999999998876643
No 163
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.43 E-value=0.051 Score=51.48 Aligned_cols=36 Identities=33% Similarity=0.443 Sum_probs=32.9
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++||++||.|+ ||.|++++..|.+.|++|+++.|+
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999996 889999999999999999999887
No 164
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=94.42 E-value=0.034 Score=54.02 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=37.2
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++.+
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~ 192 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPE 192 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchh
Confidence 457899999999999999999999999999999999865443
No 165
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=94.37 E-value=0.04 Score=51.48 Aligned_cols=42 Identities=26% Similarity=0.259 Sum_probs=33.7
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEE-eCChHHHHhh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIF-DIDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~-nR~~~ka~~l 407 (409)
+++|++||-|+ ||.|++++..|.+.|++|++. .|+.++++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~ 68 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEV 68 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 46899999986 889999999999999988776 6676666554
No 166
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=94.36 E-value=0.047 Score=52.35 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=32.5
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++||++||-|+ ||.|++++..|++.|++|++++|+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 467899999985 889999999999999999999876
No 167
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.34 E-value=0.046 Score=53.48 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=36.0
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh---HHHHh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF---EQSLL 406 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~---~ka~~ 406 (409)
++|++|+|+|+||+|.+++..+...|++|++++|+. ++.+.
T Consensus 179 ~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 222 (366)
T 2cdc_A 179 LNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV 222 (366)
T ss_dssp STTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH
Confidence 348999999999999999999999999999999988 77543
No 168
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.30 E-value=0.052 Score=55.48 Aligned_cols=41 Identities=34% Similarity=0.481 Sum_probs=38.3
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..+.|+++.|+|.|.+|++++..|..+|++|++++|+..++
T Consensus 253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~ 293 (479)
T 1v8b_A 253 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICA 293 (479)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhH
Confidence 46789999999999999999999999999999999998876
No 169
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.20 E-value=0.023 Score=51.75 Aligned_cols=41 Identities=12% Similarity=0.111 Sum_probs=35.6
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCC-CeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRG-ARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G-~~i~v~nR~~~ka~~l 407 (409)
..++++|.|+ |+.|++++..|.+.| ++|+++.|+.++++++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~ 64 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP 64 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc
Confidence 4578999995 889999999999999 6999999998876543
No 170
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=94.19 E-value=0.045 Score=51.33 Aligned_cols=40 Identities=28% Similarity=0.545 Sum_probs=34.9
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+++|++||.|+ ||.|++++..|.+.|++|++++|+.++
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE 65 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 3467899999985 889999999999999999999998654
No 171
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=94.19 E-value=0.055 Score=50.73 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=36.6
Q ss_pred CCCCCEEEEEec---hhHHHHHHHHHHhCCCeEEEEeCCh--HHHHhh
Q 015310 365 PLAGRMFVLAGA---GGAGRALAFGAKSRGARVVIFDIDF--EQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa---GGaarai~~aL~~~G~~i~v~nR~~--~ka~~l 407 (409)
.+++|++||.|+ +|.|++++..|.+.|++|++++|+. ++.+++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l 70 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKL 70 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHH
Confidence 467899999995 4599999999999999999999987 555554
No 172
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.18 E-value=0.067 Score=54.90 Aligned_cols=41 Identities=32% Similarity=0.427 Sum_probs=38.2
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..+.|+++.|+|.|.+|++++..|..+|++|++++|+..++
T Consensus 273 ~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~ 313 (494)
T 3d64_A 273 VMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICA 313 (494)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHH
T ss_pred cccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhH
Confidence 45789999999999999999999999999999999998875
No 173
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.18 E-value=0.045 Score=52.26 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=36.5
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
.++.|||+|.+|++++..|.+.|.+|++++|+.++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~ 70 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI 70 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 5799999999999999999999999999999999887653
No 174
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=94.18 E-value=0.026 Score=52.59 Aligned_cols=39 Identities=28% Similarity=0.376 Sum_probs=34.5
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
+++|++||.|+ ||.|++++..|.+.|++|++++|+.++.
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 65 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS 65 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 56889999986 8899999999999999999999986553
No 175
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=94.11 E-value=0.052 Score=52.79 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=36.9
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~ 185 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE 185 (334)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred cCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch
Confidence 4578999999999999999999999999999999998765
No 176
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.10 E-value=0.044 Score=49.41 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=31.4
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+...++.|+|+|.+|.+++..|.+.|.+|++++|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34567899999999999999999999999999999975
No 177
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.10 E-value=1.4 Score=41.93 Aligned_cols=194 Identities=13% Similarity=0.116 Sum_probs=108.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC------CChhHH-HHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF------QPGKDL-EIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~------~~~~~l-~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (409)
+.++.++-++.+.+.|.|.||.=- +... .+.+++ ..+.+..+.|+...++ . .+-++.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~----------~----~~~i~~ 91 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGS--FVSPKWVPQMAGSAEVFAGIRQRPGVTYAALAP----------N----LKGFEA 91 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE--CSCTTTCGGGTTHHHHHHHSCCCTTSEEEEECC----------S----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEECC--CcCccccccccCHHHHHHHhhhcCCCEEEEEeC----------C----HHHHHH
Confidence 456667777777778999999864 1111 111122 2222333556554432 1 245778
Q ss_pred HHHcCCcEEEEeccCcc---------------chHHHHH-hccCCCcEEE------EeccCCCCCCCHhHHHHHHHHHHH
Q 015310 94 AEDLGADYVDFELKVAS---------------NILGKQY-SSHQSGTRFI------VSCNLDCETPSEEDLGYLVSRMQA 151 (409)
Q Consensus 94 ~~~~g~dyvDiEl~~~~---------------~~~~~l~-~~~~~~~kiI------~S~H~f~~tp~~~~l~~~~~~~~~ 151 (409)
+++.|++.|.|=....+ +..++.+ .+++.+.++- .+..+...+ +.+++.+.++++.+
T Consensus 92 a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~-~~~~~~~~~~~~~~ 170 (302)
T 2ftp_A 92 ALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDV-DPRQVAWVARELQQ 170 (302)
T ss_dssp HHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCC-CHHHHHHHHHHHHH
T ss_pred HHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCC-CHHHHHHHHHHHHH
Confidence 88999999988443322 1123333 3566777773 222222222 35789999999999
Q ss_pred cCCCEEEEEeec--CCHhHHHHHHHHhccC--CCCEEEEE--cCccchhhhhhcCCCCCcccccc---CCC-CC---CCC
Q 015310 152 TGADIIKLVFSV--NDITEIARIFQLLSHC--QVPIIAYS--VGERGLVSQLLSPKFNGALVYGS---LKG-TP---VLG 218 (409)
Q Consensus 152 ~gaDivKia~~~--~~~~D~~~ll~~~~~~--~~p~i~~~--MG~~G~~SRi~~~~~Gs~ltf~~---l~~-~s---APG 218 (409)
.|+|.+-++-+. .++.++.++++.+.+. +.|+..=+ .--++...=+..-..|-...=++ +++ |- +.|
T Consensus 171 ~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~G 250 (302)
T 2ftp_A 171 MGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATG 250 (302)
T ss_dssp TTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBC
T ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCCCC
Confidence 999999988443 3688888888877543 35654322 12222222222222232222122 233 32 356
Q ss_pred CCCHHHHHhhhhh
Q 015310 219 LPTVESLRQTYKV 231 (409)
Q Consensus 219 Q~~~~~l~~~~~~ 231 (409)
+.+++++...++.
T Consensus 251 N~~~E~lv~~l~~ 263 (302)
T 2ftp_A 251 NVASEDVLYLLNG 263 (302)
T ss_dssp BCBHHHHHHHHHH
T ss_pred ChhHHHHHHHHHh
Confidence 8999888877653
No 178
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.08 E-value=0.063 Score=51.73 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=36.2
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCC--eEEEEeCChHHHHhh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFEQSLLL 407 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~--~i~v~nR~~~ka~~l 407 (409)
.+++.|||+|.+|.+++..|.+.|. +|++++|+.++++.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a 74 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA 74 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 3689999999999999999999998 999999999877654
No 179
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.08 E-value=0.061 Score=52.00 Aligned_cols=41 Identities=34% Similarity=0.396 Sum_probs=36.6
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|+|+||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 204 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 204 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 47899999999999999999999999999999998876643
No 180
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.06 E-value=0.053 Score=52.20 Aligned_cols=41 Identities=32% Similarity=0.417 Sum_probs=37.3
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|+++||.|+ ||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5789999998 9999999999999999999999998887765
No 181
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=94.03 E-value=0.94 Score=42.06 Aligned_cols=116 Identities=13% Similarity=0.057 Sum_probs=78.3
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecC--C-CCCCC-hhHHHHHHhcC-CCcEEEEeccCCCCCCCCCC
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC--I-NNFQP-GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGD 83 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~--l-~~~~~-~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~ 83 (409)
++++|+-||..-|...+.++++.+.+.|+|++.+++=- | ++..- .+.++.+++.+ ++|+-+.+-.. +
T Consensus 26 ~~~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~--------~ 97 (246)
T 3inp_A 26 KHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVK--------P 97 (246)
T ss_dssp -CCEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECS--------S
T ss_pred cCCeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeC--------C
Confidence 45789999999999999999998888899999887631 1 22221 24677788777 89999988642 2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCC
Q 015310 84 EHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETP 137 (409)
Q Consensus 84 ~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp 137 (409)
++.| ++.+.+.|+|+|-+=....+...+.+...++.|.|+.++.+. .||
T Consensus 98 p~~~---i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp--~Tp 146 (246)
T 3inp_A 98 VDAL---IESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNP--ATG 146 (246)
T ss_dssp CHHH---HHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECT--TCC
T ss_pred HHHH---HHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecC--CCC
Confidence 2344 456678899998886555443333333445567777777653 455
No 182
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=94.02 E-value=0.043 Score=53.31 Aligned_cols=41 Identities=27% Similarity=0.410 Sum_probs=37.2
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..+.|+++.|+|.|.+|++++..|..+|++|++++|+.++.
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~ 173 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPA 173 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCC
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchh
Confidence 56789999999999999999999999999999999986543
No 183
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=94.01 E-value=0.051 Score=50.57 Aligned_cols=41 Identities=22% Similarity=0.235 Sum_probs=34.7
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEE-eCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIF-DIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~-nR~~~ka~~l 407 (409)
++|++||.|+ ||.|++++..|.+.|++|++. .|+.++.+++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~ 67 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV 67 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH
Confidence 5788999985 889999999999999988775 8888777654
No 184
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.98 E-value=0.063 Score=51.75 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=37.4
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~ 178 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE 178 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh
Confidence 46789999999999999999999999999999999987653
No 185
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.95 E-value=0.069 Score=51.71 Aligned_cols=43 Identities=14% Similarity=0.328 Sum_probs=37.8
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhC-CC-eEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSR-GA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~-G~-~i~v~nR~~~ka~~l 407 (409)
.++++++||.|+ |+.|++++..|.+. |. +|++++|+.++...+
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~ 63 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEM 63 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHH
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHH
Confidence 467899999995 88999999999999 98 999999998876554
No 186
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.91 E-value=0.27 Score=48.80 Aligned_cols=112 Identities=18% Similarity=0.264 Sum_probs=68.7
Q ss_pred cCCCceEeecCcccHHHHHHHhc--CCCCCeEEEcccchHHHHhhhhhhcHHHHHhccceEEEEeCCCCeEEEEcCcHHH
Q 015310 264 VNYNGIYVPMFVDDLKKFFSTYS--SPDFAGFSVGFPYKEAVMKFCDEVHPLAQAIAAVNTIIRRPSDGKLIGYNTDCEA 341 (409)
Q Consensus 264 ~gl~~~y~~~~~~~l~~~~~~~~--~~~~~G~nVT~P~K~~i~~~~d~~~~~A~~igAvNti~~~~~~g~l~G~NTD~~G 341 (409)
-|+|..=..+++.+.++|++.++ .+.|.|+|.--==....+..++++-+. .| +-=+|-|--|
T Consensus 103 agid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~------~~----------ipvf~DDiqG 166 (398)
T 2a9f_A 103 AGVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKE------CH----------IPVFHDDQHG 166 (398)
T ss_dssp SSCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHH------CS----------SCEEEHHHHH
T ss_pred cCCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhc------CC----------cceecchhhh
Confidence 46774434455667888876663 478999877421123344444443332 12 1124445433
Q ss_pred H----HHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC
Q 015310 342 S----ITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (409)
Q Consensus 342 ~----~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~ 400 (409)
- +.++...+.- .+..++..+++|+|||-+|-+++.-|..+|+ +|++++|+
T Consensus 167 Ta~V~lAall~al~l---------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 167 TAIVVLAAIFNSLKL---------LKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp HHHHHHHHHHHHHHT---------TTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHH---------hCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 2 2222222221 1246777899999999999999999999999 99999986
No 187
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.88 E-value=0.061 Score=51.92 Aligned_cols=41 Identities=29% Similarity=0.233 Sum_probs=36.7
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.|+ ||.|++++..+...|++|+++.|+.++.+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~ 196 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLL 196 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5789999997 9999999999999999999999998887654
No 188
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=93.87 E-value=0.058 Score=50.08 Aligned_cols=43 Identities=23% Similarity=0.313 Sum_probs=34.2
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEE-EeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVI-FDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v-~nR~~~ka~~l 407 (409)
.+.+|++||.|+ ||.|++++..|.+.|++|++ ..|+.++++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~ 67 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET 67 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH
Confidence 467899999986 88999999999999998755 66887766554
No 189
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=93.87 E-value=0.42 Score=43.84 Aligned_cols=67 Identities=9% Similarity=0.135 Sum_probs=50.7
Q ss_pred CCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-cCC--CCCCC-hhHHHHHHhcC-CCcEEEEeccC
Q 015310 8 KNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DCI--NNFQP-GKDLEIILTKK-PLPVLIVYRPK 74 (409)
Q Consensus 8 ~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D~l--~~~~~-~~~l~~l~~~~-~~PiI~T~R~~ 74 (409)
+.+++|+-||..-|..++.++++.+.+.|+|++.+++ |-- .+.+- ...++.+++.+ +.|+.+.+-..
T Consensus 3 ~~~~~i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~ 74 (227)
T 1tqx_A 3 TLKAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVE 74 (227)
T ss_dssp -CCCEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESS
T ss_pred CCCCeEEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEc
Confidence 4578899999999999999999998888999998887 421 22222 24677787777 78888888753
No 190
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.86 E-value=0.069 Score=51.74 Aligned_cols=40 Identities=35% Similarity=0.381 Sum_probs=35.6
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|+++||+|+ ||.|++++..+...|++|+++.|+.++.+.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~ 209 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL 209 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH
Confidence 5789999999 899999999999999999999998877654
No 191
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=93.83 E-value=0.95 Score=41.33 Aligned_cols=113 Identities=8% Similarity=-0.047 Sum_probs=65.0
Q ss_pred CCeeEEEeec---cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---hHHHHHHhcCCCcEEEEeccCCCCCCCCC
Q 015310 9 NTTMICAPLM---AQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEG 82 (409)
Q Consensus 9 ~~~~icv~l~---~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~ 82 (409)
..-++++... ..+.++.++ .+.+.|.|.||++.+.+...... +++++.++..++.+....-... .
T Consensus 16 ~~~klg~~~~~~~~~~~~~~l~---~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~------~ 86 (257)
T 3lmz_A 16 NPFHLGMAGYTFVNFDLDTTLK---TLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM------K 86 (257)
T ss_dssp CSSEEEECGGGGTTSCHHHHHH---HHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE------C
T ss_pred CceEEEEEEEeecCCCHHHHHH---HHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc------C
Confidence 3466777442 335566655 44567999999999865321122 3444555556666553221110 3
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEeccC
Q 015310 83 DEHKRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNL 132 (409)
Q Consensus 83 ~~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~ 132 (409)
+.+...+.++.+.++|+.+|=+.-. .+.++++. .+.+.++++.+=.|+
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v~~~p~--~~~l~~l~~~a~~~gv~l~lEn~~ 135 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVKLIVGVPN--YELLPYVDKKVKEYDFHYAIHLHG 135 (257)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEEC--GGGHHHHHHHHHHHTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEecCC--HHHHHHHHHHHHHcCCEEEEecCC
Confidence 4566777888888999888877522 23344444 233456666666664
No 192
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.80 E-value=0.069 Score=51.99 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=37.8
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC--eEEEEeCChHHHHhhh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~--~i~v~nR~~~ka~~la 408 (409)
...+++.|+|+|.+|.++++.|...|. +|.+++++.++++..+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a 61 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEM 61 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHH
Confidence 346789999999999999999999996 8999999998887654
No 193
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=93.77 E-value=0.058 Score=52.00 Aligned_cols=40 Identities=33% Similarity=0.318 Sum_probs=36.6
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~ 179 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKP 179 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcc
Confidence 4578999999999999999999999999999999998754
No 194
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.77 E-value=0.051 Score=51.96 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..++++++||.|+ |+.|++++..|.+.|++|++++|+.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT 55 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 4678899999997 88999999999999999999999644
No 195
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.76 E-value=0.084 Score=51.64 Aligned_cols=41 Identities=22% Similarity=0.302 Sum_probs=36.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|+|+||+|.+++..+...|++|+++.|+.++.+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 227 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEA 227 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 57899999999999999999999999999999998776543
No 196
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=93.76 E-value=0.034 Score=54.46 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeC
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDI 399 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR 399 (409)
+++.+|+|+|+||.|..++..|...|+ +|+|++.
T Consensus 34 L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~ 68 (346)
T 1y8q_A 34 LRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDH 68 (346)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEEC
Confidence 446799999999999999999999999 9999953
No 197
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.67 E-value=0.071 Score=52.33 Aligned_cols=41 Identities=22% Similarity=0.334 Sum_probs=37.1
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
..++.|||+|..|.+++..|++.|.+|++++|++++++.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~ 69 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQ 69 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 35799999999999999999999999999999999887663
No 198
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=93.67 E-value=0.07 Score=51.30 Aligned_cols=40 Identities=23% Similarity=0.330 Sum_probs=36.9
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~ 177 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE 177 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 4678999999999999999999999999999999998765
No 199
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=93.66 E-value=1.5 Score=40.75 Aligned_cols=145 Identities=18% Similarity=0.176 Sum_probs=90.9
Q ss_pred ccCCHHHHHHHHHHHHhcCCCEEEEEecCCC-CCCCh-hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHH---HH
Q 015310 18 MAQSVEQVLSNMYQAKAEGADVVEIRLDCIN-NFQPG-KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEA---LH 92 (409)
Q Consensus 18 ~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~-~~~~~-~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l---l~ 92 (409)
...+.+++. .+.+.|||-|||.-++-. ...|. ..++.+++..++|+.+-+|++ ||-|-.++++...+ ++
T Consensus 7 c~~s~~~a~----~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR--~GdF~Ys~~E~~~M~~Di~ 80 (256)
T 1twd_A 7 CCYSMECAL----TAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPR--GGDFCYSDGEFAAILEDVR 80 (256)
T ss_dssp EESSHHHHH----HHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSS--SSCSCCCHHHHHHHHHHHH
T ss_pred EeCCHHHHH----HHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECCC--CCCCcCCHHHHHHHHHHHH
Confidence 345655554 455689999999988754 33443 345556667899999999964 56666776554433 44
Q ss_pred HHHHcCCcEEEEeccC-----ccchHHHHHhccCCCcEEEEeccC-CCCCCCHhHHHHHHHHHHHcCCCEEEEEee--cC
Q 015310 93 LAEDLGADYVDFELKV-----ASNILGKQYSSHQSGTRFIVSCNL-DCETPSEEDLGYLVSRMQATGADIIKLVFS--VN 164 (409)
Q Consensus 93 ~~~~~g~dyvDiEl~~-----~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~~l~~~~~~~~~~gaDivKia~~--~~ 164 (409)
.+.+.|+|-|=+=.-. +.+..++|+.+- ++.. +.||- |+.+++.. +-++.+.++|.| .|-+. +.
T Consensus 81 ~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a-~~~~--vTFHRAfD~~~d~~---~ale~L~~lG~~--rILTSG~~~ 152 (256)
T 1twd_A 81 TVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAA-GPLA--VTFHRAFDMCANPL---YTLNNLAELGIA--RVLTSGQKS 152 (256)
T ss_dssp HHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHH-TTSE--EEECGGGGGCSCHH---HHHHHHHHHTCC--EEEECTTSS
T ss_pred HHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHh-CCCc--EEEECchhccCCHH---HHHHHHHHcCCC--EEECCCCCC
Confidence 6677888877653322 335566776432 3444 67776 88887654 446666677855 33343 45
Q ss_pred CHhHHHHHHHHh
Q 015310 165 DITEIARIFQLL 176 (409)
Q Consensus 165 ~~~D~~~ll~~~ 176 (409)
+..|.+.+++-+
T Consensus 153 ~a~~g~~~L~~L 164 (256)
T 1twd_A 153 DALQGLSKIMEL 164 (256)
T ss_dssp STTTTHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 566666655554
No 200
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=93.63 E-value=0.071 Score=52.19 Aligned_cols=41 Identities=20% Similarity=0.323 Sum_probs=36.8
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHH-hCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAK-SRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~-~~G~~i~v~nR~~~ka 404 (409)
..+.|+++.|+|.|.+|++++..|. ..|++|++++|+.++.
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~ 200 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADA 200 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCH
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcch
Confidence 4678999999999999999999999 9999999999986543
No 201
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.60 E-value=0.089 Score=50.73 Aligned_cols=41 Identities=34% Similarity=0.470 Sum_probs=36.6
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|+++||.|+|++|.+++..+...|++|+.++++.+|.+.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 206 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLA 206 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 57899999999999999999999999999999998886643
No 202
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.56 E-value=0.092 Score=51.10 Aligned_cols=40 Identities=28% Similarity=0.316 Sum_probs=36.1
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|++++|.|+ ||.|.+++..+...|++|+++.|+.++.+.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 210 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Confidence 4789999997 999999999999999999999999887664
No 203
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.52 E-value=0.22 Score=50.24 Aligned_cols=52 Identities=27% Similarity=0.352 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEE-EEeC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI 399 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~-v~nR 399 (409)
++|.+..++..+.+.+ .+++|++|+|.|.|.+|+.++.-|.++|++|+ |.++
T Consensus 215 g~Gv~~~~~~~~~~~g---------~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 215 GRGVFITAAAAAEKIG---------LQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp HHHHHHHHHHHHHHHT---------CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHhcC---------CCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4677777777665333 57889999999999999999999999999654 8887
No 204
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=93.52 E-value=0.054 Score=52.75 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=36.6
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~ 199 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKP 199 (333)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchh
Confidence 4678999999999999999999999999999999998764
No 205
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=93.49 E-value=0.73 Score=42.31 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=76.2
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-cC--CCCCCC-hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DC--INNFQP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKR 87 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D~--l~~~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~ 87 (409)
+|+-||..-|..++.++++.+ +.|+|++++++ |- .++.+- ...++.+++.++.|+.+.+-.. +++.|
T Consensus 2 ~i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~--------dp~~~ 72 (231)
T 3ctl_A 2 KISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVT--------RPQDY 72 (231)
T ss_dssp EEEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESS--------CGGGT
T ss_pred eEEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEec--------CHHHH
Confidence 588899999999999999998 89999999886 42 123221 2467777776789999998764 22334
Q ss_pred HHHHHHHHHcCCcEEEEeccC-ccchHHHHH-hccCCCcEEEEeccCCCCCC
Q 015310 88 LEALHLAEDLGADYVDFELKV-ASNILGKQY-SSHQSGTRFIVSCNLDCETP 137 (409)
Q Consensus 88 ~~ll~~~~~~g~dyvDiEl~~-~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp 137 (409)
++.+.+.|+|+|=+=... .... .+++ ..++.|.++.++.+- .||
T Consensus 73 ---i~~~~~aGAd~itvh~Ea~~~~~-~~~i~~i~~~G~k~gv~lnp--~tp 118 (231)
T 3ctl_A 73 ---IAQLARAGADFITLHPETINGQA-FRLIDEIRRHDMKVGLILNP--ETP 118 (231)
T ss_dssp ---HHHHHHHTCSEEEECGGGCTTTH-HHHHHHHHHTTCEEEEEECT--TCC
T ss_pred ---HHHHHHcCCCEEEECcccCCccH-HHHHHHHHHcCCeEEEEEEC--CCc
Confidence 356777899998876555 3322 2333 445677788777742 355
No 206
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=93.44 E-value=0.064 Score=52.17 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=36.7
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~ 181 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV 181 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 3578999999999999999999999999999999998765
No 207
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.43 E-value=0.11 Score=50.48 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=35.5
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+||.|.+++..+..+|++|+++.++.++.+.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 207 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEV 207 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 4789999999999999999888999999999999887654
No 208
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=93.41 E-value=0.078 Score=49.27 Aligned_cols=42 Identities=21% Similarity=0.265 Sum_probs=33.4
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEe-CChHHHHh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFD-IDFEQSLL 406 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~n-R~~~ka~~ 406 (409)
.+.+|+++|.|+ ||.|++++..|.+.|++|++.+ |+.++.++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~ 65 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVST 65 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHH
Confidence 356889999996 8899999999999999988887 55555443
No 209
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=93.40 E-value=0.92 Score=40.25 Aligned_cols=119 Identities=11% Similarity=0.049 Sum_probs=63.4
Q ss_pred CeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHH---hcCCCcEEEEeccCCCCCCCCCCHHH
Q 015310 10 TTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHK 86 (409)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~ 86 (409)
.|++|.- +.+...+..+.++.+.+.|+|++++|.-........+.++.++ +..+.|+++. +
T Consensus 14 ~~~l~~I-t~~~~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~---------------~ 77 (215)
T 1xi3_A 14 KLKLYVI-TDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVD---------------D 77 (215)
T ss_dssp HTSEEEE-CCTTTSCHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEE---------------S
T ss_pred CCCEEEE-ECCchhhHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCeEEEc---------------C
Confidence 3556653 3221114555666777889999999952221100012222232 2346787763 1
Q ss_pred HHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 87 RLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 87 ~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
.++.+.+.|+|+|=++-...+ ...+.... .+..+.+|.|+ | +++ .++.+.|+|++++-
T Consensus 78 ---~~~~a~~~gad~v~l~~~~~~--~~~~~~~~-~~~~~~v~~~t----~--~e~----~~~~~~g~d~i~~~ 135 (215)
T 1xi3_A 78 ---RVDVALAVDADGVQLGPEDMP--IEVAKEIA-PNLIIGASVYS----L--EEA----LEAEKKGADYLGAG 135 (215)
T ss_dssp ---CHHHHHHHTCSEEEECTTSCC--HHHHHHHC-TTSEEEEEESS----H--HHH----HHHHHHTCSEEEEE
T ss_pred ---hHHHHHHcCCCEEEECCccCC--HHHHHHhC-CCCEEEEecCC----H--HHH----HHHHhcCCCEEEEc
Confidence 124566789999977632211 12222222 45667777763 2 343 23456799999974
No 210
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.39 E-value=0.11 Score=50.80 Aligned_cols=41 Identities=29% Similarity=0.252 Sum_probs=36.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|+++||+|+|++|.+++..+...|++|+++.++.++.+.+
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 229 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRA 229 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHH
Confidence 57899999999999999999999999999999998876543
No 211
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.39 E-value=0.089 Score=50.86 Aligned_cols=41 Identities=22% Similarity=0.363 Sum_probs=36.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.|++++|+|+||.|.+++..+...|+ +|+++.|+.++.+.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~ 205 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFA 205 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 68899999999999999999999999 999999998876543
No 212
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.37 E-value=0.072 Score=50.49 Aligned_cols=40 Identities=28% Similarity=0.304 Sum_probs=35.5
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|++++|+|+ ||.|++++..+...|++|+++.|+.++.+.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 165 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 165 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999998 999999999999999999999998877554
No 213
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.36 E-value=0.086 Score=51.06 Aligned_cols=41 Identities=27% Similarity=0.281 Sum_probs=36.6
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.|++++|+|+|+.|.+++..+...|+ +|+++.|+.++.+.+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~ 208 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELA 208 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 68899999999999999999999999 999999998876543
No 214
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=93.33 E-value=0.069 Score=51.94 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=36.6
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~ 181 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNP 181 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 4577899999999999999999999999999999998765
No 215
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=93.29 E-value=0.64 Score=42.71 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=73.8
Q ss_pred HHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEecc---CCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 29 MYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRP---KWAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 29 ~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~---~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
++.+.+.|.|.||++.+++...+..+++++.++..++++....-. ..++ . .. +...+.++.|.++|+.+|=+-
T Consensus 29 l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~-~--~~-~~~~~~i~~A~~lGa~~v~~~ 104 (264)
T 1yx1_A 29 LPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLELWREDG-Q--LN-PELEPTLRRAEACGAGWLKVS 104 (264)
T ss_dssp HHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEEEEEEEEEECTTS-S--BC-TTHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHcCCCEEEEEHHhcCCCHHHHHHHHHHHHcCCEEEEecchhhcCCch-h--HH-HHHHHHHHHHHHcCCCEEEEe
Confidence 445566799999999987654223445666666677776543211 1111 1 11 345567888889999988775
Q ss_pred ccCc--cchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEee
Q 015310 106 LKVA--SNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS 162 (409)
Q Consensus 106 l~~~--~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~ 162 (409)
.... ...++++. .+.+.++++.+=.|.+.-..+.+++..+++...+.+.+ +++..=
T Consensus 105 ~g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D 163 (264)
T 1yx1_A 105 LGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFD 163 (264)
T ss_dssp EECCCSSCCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred cCCCCcHHHHHHHHHHHHhcCCEEEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEe
Confidence 4322 12344554 34455666666555321112345666666666555556 776653
No 216
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.27 E-value=0.072 Score=51.03 Aligned_cols=41 Identities=22% Similarity=0.216 Sum_probs=36.4
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.| +||.|++++..+...|++|+++.|+.++.+.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~ 181 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA 181 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999 69999999999999999999999998876654
No 217
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.24 E-value=0.09 Score=50.93 Aligned_cols=41 Identities=27% Similarity=0.262 Sum_probs=36.1
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|+.|.+++..+...|++|+++.++.+|.+.+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA 216 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 57899999999999999999999999999999988776543
No 218
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.21 E-value=0.093 Score=50.95 Aligned_cols=41 Identities=34% Similarity=0.438 Sum_probs=36.7
Q ss_pred CC--CEEEEEec-hhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AG--RMFVLAGA-GGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~--~~vlvlGa-GGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.| ++++|.|+ ||.|++++..+...|+ +|+++.|+.++.+.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~ 202 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL 202 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH
Confidence 46 89999998 9999999999999999 999999998876654
No 219
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=93.20 E-value=0.064 Score=52.14 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~ 181 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIK 181 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccH
Confidence 4578899999999999999999999999999999998654
No 220
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.16 E-value=2.3 Score=39.34 Aligned_cols=62 Identities=18% Similarity=0.292 Sum_probs=41.0
Q ss_pred CCeeEEEeecc--CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---------------------hhHHHHHHhcCCC
Q 015310 9 NTTMICAPLMA--QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---------------------GKDLEIILTKKPL 65 (409)
Q Consensus 9 ~~~~icv~l~~--~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~---------------------~~~l~~l~~~~~~ 65 (409)
+++.+...++. ++.++..+.++.+.+.|+|+||+++-+-++..+ .+.++.+++..++
T Consensus 16 ~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~ 95 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSC 95 (262)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 44555555544 445888888888888999999999866432211 1234555556788
Q ss_pred cEEEE
Q 015310 66 PVLIV 70 (409)
Q Consensus 66 PiI~T 70 (409)
|+++-
T Consensus 96 Pv~~m 100 (262)
T 1rd5_A 96 PVVLL 100 (262)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98875
No 221
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=93.15 E-value=0.059 Score=52.11 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=36.5
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|..|++++..|..+|++|+.++|+.++
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~ 174 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKS 174 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence 4578999999999999999999999999999999998654
No 222
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.15 E-value=0.081 Score=50.88 Aligned_cols=41 Identities=24% Similarity=0.252 Sum_probs=36.3
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.|+ ||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~ 186 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA 186 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5789999995 9999999999999999999999998776654
No 223
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=93.14 E-value=0.055 Score=50.02 Aligned_cols=38 Identities=34% Similarity=0.448 Sum_probs=33.6
Q ss_pred CCCCCEEEEEech---hHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 365 PLAGRMFVLAGAG---GAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 365 ~~~~~~vlvlGaG---Gaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
++++|+++|.|++ |.|++++..|.+.|++|+++.|+.+
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~ 57 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRA 57 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSS
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcc
Confidence 4778999999975 9999999999999999999888744
No 224
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=93.13 E-value=0.086 Score=51.51 Aligned_cols=40 Identities=28% Similarity=0.309 Sum_probs=36.7
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~ 206 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS 206 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc
Confidence 4678999999999999999999999999999999998754
No 225
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=93.12 E-value=0.093 Score=50.73 Aligned_cols=40 Identities=25% Similarity=0.308 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeC-ChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI-DFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR-~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++| +.++
T Consensus 142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~ 182 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS 182 (320)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh
Confidence 457899999999999999999999999999999999 7654
No 226
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.10 E-value=0.1 Score=53.11 Aligned_cols=39 Identities=26% Similarity=0.227 Sum_probs=35.5
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
-++|.|||+|-+|.+++..|++.|.+|++++|++++++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~ 75 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDA 75 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 368999999999999999999999999999999887664
No 227
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.10 E-value=0.088 Score=51.77 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=31.6
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
+...|+|+|+|-+|.++|++|++.|.+|+|+.|..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34589999999999999999999999999999874
No 228
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.09 E-value=0.097 Score=50.89 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=36.4
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.| +||.|.+++..+...|++|++++|+.++.+.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 203 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA 203 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999 69999999999999999999999998876653
No 229
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.06 E-value=0.097 Score=50.58 Aligned_cols=41 Identities=24% Similarity=0.117 Sum_probs=36.5
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.|+ ||.|++++..+...|++|+++.|+.++.+.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~ 207 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA 207 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4789999999 9999999999999999999999998876654
No 230
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.03 E-value=0.23 Score=49.80 Aligned_cols=52 Identities=25% Similarity=0.360 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEE-EEeC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI 399 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~-v~nR 399 (409)
++|.+.+++..+.+.+ .+++|++++|.|.|.+|..++.-|.++|++|+ |.+.
T Consensus 190 g~Gv~~~~~~~~~~~g---------~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 190 GFGVAVATREMAKKLW---------GGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHH---------SCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHhcC---------CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3677777776665332 57889999999999999999999999999654 8887
No 231
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=92.97 E-value=0.064 Score=51.27 Aligned_cols=39 Identities=33% Similarity=0.469 Sum_probs=36.0
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
.+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~ 157 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVD 157 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCC
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccc
Confidence 478999999999999999999999999999999998654
No 232
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.94 E-value=0.11 Score=52.73 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=34.5
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
++|.|||+|-+|.+++..|++.|.+|++++|+++++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~ 91 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCK 91 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHH
Confidence 6899999999999999999999999999999998654
No 233
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.90 E-value=0.11 Score=50.25 Aligned_cols=41 Identities=27% Similarity=0.340 Sum_probs=36.2
Q ss_pred CCCEEEEEech-hHHHHHHHHHHhC-CCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAG-GAGRALAFGAKSR-GARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaG-Gaarai~~aL~~~-G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.|+| |.|++++..+... |++|++++|+.++.+.+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~ 212 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA 212 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 57899999998 9999999999998 99999999998876543
No 234
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.88 E-value=0.14 Score=50.27 Aligned_cols=40 Identities=28% Similarity=0.307 Sum_probs=35.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|.+|||+|+|++|.+++..+..+|++|+++.++.++.+.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~ 233 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREA 233 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4789999999999999999888999999999998877654
No 235
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.86 E-value=0.11 Score=50.31 Aligned_cols=41 Identities=32% Similarity=0.394 Sum_probs=36.2
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|+++||.|+ ||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 200 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV 200 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 5789999998 9999999999999999999999988776543
No 236
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.84 E-value=0.081 Score=51.43 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+.|+++.|+|.|.+|++++..|..+|++|++++|+.
T Consensus 141 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 141 TGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSC
T ss_pred CccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46789999999999999999999999999999999986
No 237
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=92.84 E-value=0.13 Score=50.39 Aligned_cols=40 Identities=20% Similarity=0.314 Sum_probs=36.4
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+...
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~ 195 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK 195 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH
Confidence 4678999999999999999999999999999999998643
No 238
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.81 E-value=0.11 Score=49.84 Aligned_cols=40 Identities=28% Similarity=0.320 Sum_probs=36.0
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|++++|+| +||.|.+++..+...|++|+++.|+.++.+.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 188 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI 188 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 578999999 7999999999999999999999999887654
No 239
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.80 E-value=0.084 Score=51.22 Aligned_cols=40 Identities=25% Similarity=0.403 Sum_probs=36.5
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|+.++|+.++
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~ 175 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRE 175 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHH
Confidence 4678999999999999999999999999999999998643
No 240
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=92.79 E-value=0.099 Score=51.19 Aligned_cols=38 Identities=29% Similarity=0.493 Sum_probs=35.3
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
.+.|+++.|+|.|.+|++++..|...|++|++++|+.+
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~ 202 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLS 202 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 57899999999999999999999999999999999754
No 241
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=92.77 E-value=6.6 Score=37.57 Aligned_cols=160 Identities=13% Similarity=0.165 Sum_probs=97.4
Q ss_pred CeeEEEeecc------------CCHHHHHHHHHHHHhcCCCEEEEEecC-CCCC---CC---hhHHHHHHhcCCCcEEEE
Q 015310 10 TTMICAPLMA------------QSVEQVLSNMYQAKAEGADVVEIRLDC-INNF---QP---GKDLEIILTKKPLPVLIV 70 (409)
Q Consensus 10 ~~~icv~l~~------------~~~~e~~~~~~~~~~~~aD~vElRlD~-l~~~---~~---~~~l~~l~~~~~~PiI~T 70 (409)
...|++.+++ -|.+|+.+++.++.+.||-++=+-+-- -+.. ++ .+.+..+|+.++..|.+|
T Consensus 7 kvIIt~A~tGa~~t~~~~P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~T 86 (311)
T 3e49_A 7 KVIITCAVTGAIHTPSMSPYLPVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLT 86 (311)
T ss_dssp CBCEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCCEEEEC
T ss_pred CEEEEEcCCCCcCCcccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEEC
Confidence 4566666765 255899999999999999999877654 2211 11 245566666565444444
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCccc---------------hHHHHHhccCCCcEEEEeccCCCC
Q 015310 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASN---------------ILGKQYSSHQSGTRFIVSCNLDCE 135 (409)
Q Consensus 71 ~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiEl~~~~~---------------~~~~l~~~~~~~~kiI~S~H~f~~ 135 (409)
. ||....+.++|++.+.. +.+|..-+...+..- +-+..+.. ... .| |..
T Consensus 87 T-----gg~~~~~~eerla~~~~---~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~--~~~-~v-----~~n 150 (311)
T 3e49_A 87 T-----GGSPHMTVEERLRPATH---YMPELASLNMGSMNFGLYPMLERFKEFAHGWEREHLER--SRD-LV-----FKN 150 (311)
T ss_dssp S-----CSCTTSCHHHHHHHHHH---HCCSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHG--GGG-CE-----ECC
T ss_pred C-----CCCCCCCHHHHHHHHHh---cCCCeeeecCCCcccccccchhhccccccccchhhccc--CCC-ce-----ecC
Confidence 2 45445678888876643 368887776544210 00001100 001 11 233
Q ss_pred CCCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHHHHHhccC---CCCEEEEEcCc
Q 015310 136 TPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYSVGE 190 (409)
Q Consensus 136 tp~~~~l~~~~~~~~~~gaDivKia~~~~~~~D~~~ll~~~~~~---~~p~i~~~MG~ 190 (409)
| .+.+.+.++.|++.| +|.-...-|..++..+..+..+- ....+-+.||.
T Consensus 151 ~--~~~i~~~~~~~~e~G---i~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv 203 (311)
T 3e49_A 151 T--FADIEFILKTCGGNG---TRFEFECYDTSHLYNLAHFVDRKLATPPFFVQTVFGL 203 (311)
T ss_dssp C--HHHHHHHHHHHHTTT---CEEEEEECSHHHHHHHHHHHHTTCSCSSEEEEEEESC
T ss_pred C--HHHHHHHHHHHHHcC---CeeEEEEECHHHHHHHHHHHHcCCCCCCeEEEEEecC
Confidence 4 367899999999999 57777777999987777776432 33466677764
No 242
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.73 E-value=0.37 Score=45.95 Aligned_cols=88 Identities=15% Similarity=0.156 Sum_probs=62.5
Q ss_pred CeeEEEeeccCCHHHHHHHHHHHHhcCCC-EEEEEecC--CC---CC--CC---hhHHHHHHhcCCCcEEEEeccCCCCC
Q 015310 10 TTMICAPLMAQSVEQVLSNMYQAKAEGAD-VVEIRLDC--IN---NF--QP---GKDLEIILTKKPLPVLIVYRPKWAGG 78 (409)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~aD-~vElRlD~--l~---~~--~~---~~~l~~l~~~~~~PiI~T~R~~~eGG 78 (409)
.| +.+.|.+.+.++..+.++.+.+.|+| .||+-+-+ .. .+ ++ .+.++.+++..++|+++-+|..
T Consensus 94 ~p-~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~---- 168 (311)
T 1jub_A 94 GP-IFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY---- 168 (311)
T ss_dssp SC-CEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC----
T ss_pred CC-EEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC----
Confidence 44 45888999999999999998888999 99996531 00 00 11 1233444445589999988743
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 79 LYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 79 ~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
.+.++..++.+.+.+.|+|+|.+-
T Consensus 169 ---~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 169 ---FDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp ---CSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred ---CCHHHHHHHHHHHHHcCCcEEEec
Confidence 256677778888889999998873
No 243
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.71 E-value=0.097 Score=50.18 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=36.4
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|.| +||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 181 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 578999999 79999999999999999999999998876644
No 244
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=92.68 E-value=0.085 Score=51.33 Aligned_cols=40 Identities=23% Similarity=0.232 Sum_probs=36.4
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|..+|++|++++|+.++
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~ 180 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMK 180 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 4678999999999999999999999999999999998653
No 245
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.67 E-value=0.13 Score=50.82 Aligned_cols=41 Identities=41% Similarity=0.514 Sum_probs=36.2
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|++|.+++..+..+|+ +|+.++++.+|.+.+
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 226 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLL 226 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 57899999999999999988888999 999999998886543
No 246
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.64 E-value=1.5 Score=40.03 Aligned_cols=141 Identities=17% Similarity=0.158 Sum_probs=87.4
Q ss_pred HHHHhcCCCEEEEEecCCC-CCCCh-hHHHHHH---hcCCCcEEEEeccCCCCCCCCCCHHHHHHH---HHHHHHcCCcE
Q 015310 30 YQAKAEGADVVEIRLDCIN-NFQPG-KDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRLEA---LHLAEDLGADY 101 (409)
Q Consensus 30 ~~~~~~~aD~vElRlD~l~-~~~~~-~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l---l~~~~~~g~dy 101 (409)
..+.+.|||-|||.-++-. ...|+ ..++.++ +..++|+.+-+|++ ||-|-.++++...+ ++.+.+.|+|-
T Consensus 15 ~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRPR--~GdF~Ys~~E~~~M~~Di~~~~~~GadG 92 (224)
T 2bdq_A 15 TRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPR--GGNFVYNDLELRIMEEDILRAVELESDA 92 (224)
T ss_dssp GGCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHTTCEEEEECCSS--SSCSCCCHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCCCEEEEcCCcccCCcCCCHHHHHHHHHhhhhcCCceEEEECCC--CCCCcCCHHHHHHHHHHHHHHHHcCCCE
Confidence 3556789999999988754 33442 2445555 66799999999964 56666776554333 44677788988
Q ss_pred EEEeccC-----ccchHHHHHhccCCCcEEEEeccC-CCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC--HhHHHHHH
Q 015310 102 VDFELKV-----ASNILGKQYSSHQSGTRFIVSCNL-DCETPSEEDLGYLVSRMQATGADIIKLVFSVND--ITEIARIF 173 (409)
Q Consensus 102 vDiEl~~-----~~~~~~~l~~~~~~~~kiI~S~H~-f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~--~~D~~~ll 173 (409)
|=+=.-. +.+..++|+.+- ++.. +.||- |+.+|. .+..+-++.+.++|.|=+==.--+.+ ..|.+.++
T Consensus 93 vV~G~Lt~dg~iD~~~~~~Li~~a-~~~~--vTFHRAFD~~~~-~d~~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L 168 (224)
T 2bdq_A 93 LVLGILTSNNHIDTEAIEQLLPAT-QGLP--LVFHMAFDVIPK-SDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHI 168 (224)
T ss_dssp EEECCBCTTSSBCHHHHHHHHHHH-TTCC--EEECGGGGGSCT-TTHHHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHH
T ss_pred EEEeeECCCCCcCHHHHHHHHHHh-CCCe--EEEECchhccCC-cCHHHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHH
Confidence 7663322 335566776331 3444 67786 888853 24455688888888653332222334 66665555
Q ss_pred HHh
Q 015310 174 QLL 176 (409)
Q Consensus 174 ~~~ 176 (409)
+-+
T Consensus 169 ~~L 171 (224)
T 2bdq_A 169 KAL 171 (224)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 247
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.63 E-value=0.12 Score=50.34 Aligned_cols=41 Identities=22% Similarity=0.164 Sum_probs=35.8
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|.+|+|+|+|+.|.+++..+..+|++|+++.++.+|.+.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~ 220 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEA 220 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence 57899999999999999998888999999999988776543
No 248
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.62 E-value=0.11 Score=50.74 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=35.1
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|+.|.+++..+..+|++|+++.|+.++.+.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~ 218 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED 218 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 4789999999999999999888899999999988777554
No 249
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.61 E-value=0.16 Score=49.24 Aligned_cols=40 Identities=30% Similarity=0.395 Sum_probs=35.5
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|.+|||+|+|+.|.+++..+..+|+ +|++++++.+|.+.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 211 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 211 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 47899999999999999998889999 99999999877553
No 250
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.59 E-value=0.14 Score=49.91 Aligned_cols=41 Identities=34% Similarity=0.413 Sum_probs=35.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|++|.+++..++.+|+ .|+++.++.+|.+.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 220 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 47899999999999999999999999 599999998876543
No 251
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.59 E-value=0.13 Score=50.07 Aligned_cols=41 Identities=27% Similarity=0.342 Sum_probs=35.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHhC-CCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~-G~~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|++|.+++..+..+ |++|+++.++.+|.+.+
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~ 227 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA 227 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 478999999999999999888888 99999999998876543
No 252
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=92.58 E-value=0.11 Score=51.79 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=31.0
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
.++|+|+|+|.+|.+++..|++.|.+|+|+.|..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999864
No 253
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.58 E-value=0.074 Score=50.93 Aligned_cols=39 Identities=28% Similarity=0.517 Sum_probs=30.5
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
...++++|||.|+ |+.|++++..|.+.|.+|+++.|+.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4567889999997 88999999999999999999999753
No 254
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.57 E-value=0.12 Score=50.32 Aligned_cols=40 Identities=25% Similarity=0.398 Sum_probs=36.5
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~ 200 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP 200 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch
Confidence 4678999999999999999999999999999999998654
No 255
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.57 E-value=0.16 Score=50.03 Aligned_cols=40 Identities=33% Similarity=0.367 Sum_probs=35.5
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|++|.+++..+..+|+ +|++++++.+|.+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~ 225 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 225 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence 57899999999999999998889999 89999999887654
No 256
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.49 E-value=0.16 Score=49.70 Aligned_cols=40 Identities=30% Similarity=0.427 Sum_probs=35.6
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|+.|.+++..+..+|+ +|+++.++.+|.+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 235 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 235 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 57899999999999999998999999 89999998887654
No 257
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=92.46 E-value=0.12 Score=50.35 Aligned_cols=41 Identities=20% Similarity=0.301 Sum_probs=37.2
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
..+.|+++.|+|.|.+|++++..|...|++|+.++|+.++.
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~ 177 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED 177 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchh
Confidence 45789999999999999999999999999999999986554
No 258
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.45 E-value=1.4 Score=39.30 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=68.0
Q ss_pred eeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-cCC-CCC-CC-hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHH
Q 015310 11 TMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DCI-NNF-QP-GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHK 86 (409)
Q Consensus 11 ~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D~l-~~~-~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~ 86 (409)
.+|+-+|..-+..++.+.++.+.+.|+|++++|+ |-- ... .. .+.++++++.++.|+.+.+--. +.++
T Consensus 4 ~~~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~--------d~~~ 75 (220)
T 2fli_A 4 LKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVV--------DPER 75 (220)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESS--------SGGG
T ss_pred cEEEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeec--------CHHH
Confidence 4688889999998888888888888999999994 532 211 11 3456677665677877765422 1122
Q ss_pred HHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEecc
Q 015310 87 RLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131 (409)
Q Consensus 87 ~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H 131 (409)
+ ++.+.+.|+|+|=+=....+.....+...++.+.++++|.+
T Consensus 76 ~---i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~ 117 (220)
T 2fli_A 76 Y---VEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVIN 117 (220)
T ss_dssp G---HHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEEC
T ss_pred H---HHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEc
Confidence 3 36677789999866333222211111122234677888874
No 259
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=92.44 E-value=6.2 Score=37.79 Aligned_cols=168 Identities=12% Similarity=0.147 Sum_probs=97.6
Q ss_pred CeeEEEeecc------------CCHHHHHHHHHHHHhcCCCEEEEEecC-CCCC---CC---hhHHHHHHhcCCCcEEEE
Q 015310 10 TTMICAPLMA------------QSVEQVLSNMYQAKAEGADVVEIRLDC-INNF---QP---GKDLEIILTKKPLPVLIV 70 (409)
Q Consensus 10 ~~~icv~l~~------------~~~~e~~~~~~~~~~~~aD~vElRlD~-l~~~---~~---~~~l~~l~~~~~~PiI~T 70 (409)
...|++.+++ -|.+|+.+++.++.+.||-++=+-+-- -+.. ++ .+.+..+|+.++..|.+|
T Consensus 7 kvIIt~A~tGa~~t~~~~P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~T 86 (311)
T 3e02_A 7 KIIITCAVTGSIHTPTMSPYLPITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDAILNIT 86 (311)
T ss_dssp SBCEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCCEEEEC
T ss_pred CEEEEEcCCCCcCCcccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEEC
Confidence 4566667765 245899999999999999999877654 2211 11 245566666565444444
Q ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCccc----hHHHHHhccCCCc-EEEEecc--CCCCCCCHhHHH
Q 015310 71 YRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASN----ILGKQYSSHQSGT-RFIVSCN--LDCETPSEEDLG 143 (409)
Q Consensus 71 ~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiEl~~~~~----~~~~l~~~~~~~~-kiI~S~H--~f~~tp~~~~l~ 143 (409)
. ||....+.++|++.+.. +.+|..-+...+..- ..+++...+...- ..+-.+. .|..|| +.+.
T Consensus 87 T-----gg~~~~~~eerla~~~~---~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~--~~i~ 156 (311)
T 3e02_A 87 T-----GGGLGMSLDERLAPARA---ARPEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTF--SQIE 156 (311)
T ss_dssp S-----SCSTTCCHHHHHHHHHH---HCCSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCH--HHHH
T ss_pred C-----CCCCCCCHHHHHHHHHh---cCCCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCH--HHHH
Confidence 2 45555678888776643 368887776443210 0000000000000 0000000 133343 5789
Q ss_pred HHHHHHHHcCCCEEEEEeecCCHhHHHHHHHHhccC---CCCEEEEEcCc
Q 015310 144 YLVSRMQATGADIIKLVFSVNDITEIARIFQLLSHC---QVPIIAYSVGE 190 (409)
Q Consensus 144 ~~~~~~~~~gaDivKia~~~~~~~D~~~ll~~~~~~---~~p~i~~~MG~ 190 (409)
+.++.|++.| +|.=...-|..++..+..+..+- ....+-+.||.
T Consensus 157 ~~~~~~~e~G---i~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vlGv 203 (311)
T 3e02_A 157 RGMTELGASG---TRFEFECYDVGHLYNLAHFVDRKLVEPPFFLQCVFGI 203 (311)
T ss_dssp HHHHHHHTTT---CEEEEEECSHHHHHHHHHHHHTTSSCSCEEEEEEECC
T ss_pred HHHHHHHHcC---CeEEEEEEcHHHHHHHHHHHHcCCCCCCeEEEEEecC
Confidence 9999999999 57777777999987777775432 33466677764
No 260
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.44 E-value=0.16 Score=49.58 Aligned_cols=41 Identities=29% Similarity=0.505 Sum_probs=36.1
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|+.|.+++..+..+|+ +|++++|+.+|.+.+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~ 232 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA 232 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 57899999999999999999999999 899999988876543
No 261
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.39 E-value=0.14 Score=49.51 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=35.9
Q ss_pred CCCEEEEEechhHHHHHHHHHHhC--CCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~--G~~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|+.|.+++..+..+ |++|+++.++.+|.+.+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~ 212 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence 688999999999999999888888 99999999998876543
No 262
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=92.37 E-value=0.13 Score=50.32 Aligned_cols=39 Identities=28% Similarity=0.326 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..+.|+++.|+|.|.+|++++..|..+|++|+.++|+..
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 207 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRL 207 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCc
Confidence 568899999999999999999999999999999999853
No 263
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.33 E-value=0.17 Score=49.42 Aligned_cols=40 Identities=28% Similarity=0.465 Sum_probs=35.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|+.|.+++..+..+|+ +|++++++.+|.+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~ 232 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK 232 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 57899999999999999999999999 89999998887654
No 264
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=92.28 E-value=0.12 Score=50.63 Aligned_cols=38 Identities=26% Similarity=0.289 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+.|+++.|+|.|.+|++++..|..+|++|+.++|+.
T Consensus 160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~ 197 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQ 197 (351)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSC
T ss_pred ccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCc
Confidence 46889999999999999999999999999999999975
No 265
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=92.28 E-value=0.13 Score=49.34 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=35.3
Q ss_pred CCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 365 PLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 365 ~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
.+.|+++.|+|.|.+|++++..|...|++|++++|+.+
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~ 158 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK 158 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 57899999999999999999999999999999999864
No 266
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.28 E-value=0.14 Score=49.71 Aligned_cols=41 Identities=20% Similarity=0.176 Sum_probs=36.3
Q ss_pred CCCEEEEE-echhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvl-GaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|. |+||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 208 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC 208 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 57899999 579999999999999999999999998887654
No 267
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.28 E-value=0.11 Score=50.00 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=34.9
Q ss_pred CCEEEEEechhHHHHHHHHHHhCC----CeEEEEeCChH--HHHhh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRG----ARVVIFDIDFE--QSLLL 407 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G----~~i~v~nR~~~--ka~~l 407 (409)
..++.|||+|.+|.+++..|.+.| .+|++++|+.+ +++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l 67 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSAL 67 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHH
Confidence 347999999999999999999999 58999999986 66655
No 268
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.24 E-value=0.99 Score=44.01 Aligned_cols=158 Identities=16% Similarity=0.217 Sum_probs=103.3
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
.|.+..++|++++.+.|||+|-+=+.-. +..+.+..+++..++|++.-+= .+ | ++...+++.|+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~---~~a~al~~I~~~~~vPlvaDiH---------f~---~-~lal~a~e~G~ 106 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHK---EDVEALEEIVKKSPMPVIADIH---------FA---P-SYAFLSMEKGV 106 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSH---HHHHHHHHHHHHCSSCEEEECC---------SC---H-HHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCCh---HHHHHHHHHHhcCCCCEEEeCC---------CC---H-HHHHHHHHhCC
Confidence 4678889999999999999998766532 2245677777788999997531 11 2 34456888899
Q ss_pred cEEEEeccCc--cchHHHHH-hccCCCcEE-EE-eccCCC---------CCCC--HhHHHHHHHHHHHcCCCEEEEEeec
Q 015310 100 DYVDFELKVA--SNILGKQY-SSHQSGTRF-IV-SCNLDC---------ETPS--EEDLGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 100 dyvDiEl~~~--~~~~~~l~-~~~~~~~ki-I~-S~H~f~---------~tp~--~~~l~~~~~~~~~~gaDivKia~~~ 163 (409)
|-+-|.-... ++.+++++ .+++.++.+ |+ .+=..+ .||. .+...+..+.+.++|-+=+++-..+
T Consensus 107 dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~ 186 (366)
T 3noy_A 107 HGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKG 186 (366)
T ss_dssp SEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec
Confidence 8877653332 23445555 344445543 32 322221 2431 2445667788889998888899998
Q ss_pred CCHhHHHHHHHHhc-cCCCCEEEEEcCccchh
Q 015310 164 NDITEIARIFQLLS-HCQVPIIAYSVGERGLV 194 (409)
Q Consensus 164 ~~~~D~~~ll~~~~-~~~~p~i~~~MG~~G~~ 194 (409)
.+..+.....+.+. +.+.|+ -++.++.|..
T Consensus 187 S~v~~~i~ayr~la~~~dyPL-HlGvTEAG~~ 217 (366)
T 3noy_A 187 SDVLQNVRANLIFAERTDVPL-HIGITEAGMG 217 (366)
T ss_dssp SSHHHHHHHHHHHHHHCCCCE-EECCSSCCSH
T ss_pred CChHHHHHHHHHHHhccCCCE-EEccCCCCCC
Confidence 88888777665544 458886 5777776654
No 269
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=92.12 E-value=3.2 Score=37.66 Aligned_cols=88 Identities=20% Similarity=0.136 Sum_probs=47.7
Q ss_pred CeeEEEeecc---CCHHHHHHHHHHHHhcCCCEEEEEecCCC----CCCChhHHHHHHhcCCCcEE-EEeccCCCCCCCC
Q 015310 10 TTMICAPLMA---QSVEQVLSNMYQAKAEGADVVEIRLDCIN----NFQPGKDLEIILTKKPLPVL-IVYRPKWAGGLYE 81 (409)
Q Consensus 10 ~~~icv~l~~---~~~~e~~~~~~~~~~~~aD~vElRlD~l~----~~~~~~~l~~l~~~~~~PiI-~T~R~~~eGG~~~ 81 (409)
+.++++.... .+.++.++ .+.+.|.|.||++.+... +....+++.++.+..++.+. ++.-.. .-.
T Consensus 6 ~m~lg~~~~~~~~~~~~~~l~---~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~----~~~ 78 (272)
T 2q02_A 6 KTRFCINRKIAPGLSIEAFFR---LVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYP----FNQ 78 (272)
T ss_dssp GGGEEEEGGGCTTSCHHHHHH---HHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETT----TTS
T ss_pred ehhhhhcccccCCCCHHHHHH---HHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhc----cCC
Confidence 3456665433 34566655 445679999999987542 11223456666666777763 222110 101
Q ss_pred CCH---HHHHHHHHHHHHcCCcEEEE
Q 015310 82 GDE---HKRLEALHLAEDLGADYVDF 104 (409)
Q Consensus 82 ~~~---~~~~~ll~~~~~~g~dyvDi 104 (409)
.++ +...+.++.+.++|+.+|=+
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~ 104 (272)
T 2q02_A 79 LTEEVVKKTEGLLRDAQGVGARALVL 104 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 122 22344556666778777765
No 270
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=92.11 E-value=2 Score=38.49 Aligned_cols=118 Identities=18% Similarity=0.154 Sum_probs=62.0
Q ss_pred eeEEEeeccC-CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC---hhHHHHHH---hcCCCcEEEEeccCCCCCCCCCC
Q 015310 11 TMICAPLMAQ-SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP---GKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGD 83 (409)
Q Consensus 11 ~~icv~l~~~-~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~---~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~ 83 (409)
+++|.-.... ..++..+.++.+.+.|+|+|++|.-....... .+.+..+. +..+.|+++.
T Consensus 18 ~~i~~It~~~~~~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~------------- 84 (227)
T 2tps_A 18 LSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVN------------- 84 (227)
T ss_dssp TTEEEEECGGGCSSCHHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEE-------------
T ss_pred CCEEEEECCccccchHHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEc-------------
Confidence 4577643321 10125566777778899999999533222221 11122222 2346888873
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 84 EHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 84 ~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
++ ++.+.+.|+++|=+.-... + +.++...... ..+-+|.|+ .++ +.++.+.|+|.+++
T Consensus 85 --~~---~~~a~~~gad~v~l~~~~~-~-~~~~~~~~g~-~~~~~s~~t------~~e----~~~a~~~g~d~v~~ 142 (227)
T 2tps_A 85 --DD---VELALNLKADGIHIGQEDA-N-AKEVRAAIGD-MILGVSAHT------MSE----VKQAEEDGADYVGL 142 (227)
T ss_dssp --SC---HHHHHHHTCSEEEECTTSS-C-HHHHHHHHTT-SEEEEEECS------HHH----HHHHHHHTCSEEEE
T ss_pred --CH---HHHHHHcCCCEEEECCCcc-C-HHHHHHhcCC-cEEEEecCC------HHH----HHHHHhCCCCEEEE
Confidence 11 2356678999987754332 2 2333321112 344455553 233 33455679999997
No 271
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.10 E-value=0.13 Score=50.12 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=36.1
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|+| +||.|.+++..+...|++|+++.|+.++.+.+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL 204 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 578999999 69999999999999999999999998776543
No 272
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.07 E-value=0.13 Score=50.48 Aligned_cols=40 Identities=38% Similarity=0.502 Sum_probs=35.8
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|.+|||+|+|++|.+++..+..+|+ +|++++++.+|.+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~ 233 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYET 233 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 57899999999999999999999999 89999998887654
No 273
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.07 E-value=0.15 Score=49.74 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=35.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|+.|.+++..++.+|+ +|+++.++.+|.+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 231 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK 231 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 57899999999999999988888999 89999998877654
No 274
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.06 E-value=0.22 Score=47.94 Aligned_cols=40 Identities=28% Similarity=0.294 Sum_probs=35.1
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHH
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSL 405 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~ 405 (409)
..|++++|.|+||.+..++..++.+|+ .+++++++.+|.+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~ 199 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLA 199 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHH
Confidence 357899999999999999999999999 6788899887754
No 275
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.02 E-value=0.2 Score=49.01 Aligned_cols=40 Identities=25% Similarity=0.264 Sum_probs=35.6
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|++|.+++..+..+|+ +|+++.++.+|.+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 222 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRL 222 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 47899999999999999999999999 89999999887653
No 276
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=91.96 E-value=0.13 Score=50.72 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCe-EEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~-i~v~nR~~~ 402 (409)
..+.|+++.|+|.|.+|++++..|..+|++ |++++|+..
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~ 199 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQAL 199 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCC
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCcc
Confidence 467899999999999999999999999996 999999863
No 277
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=91.93 E-value=0.094 Score=55.25 Aligned_cols=36 Identities=42% Similarity=0.625 Sum_probs=31.4
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeC
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDI 399 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR 399 (409)
..++||.+||-|+ ||.|++++..|++.|++|++++|
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r 51 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDL 51 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5688999999996 78999999999999999999987
No 278
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.93 E-value=0.11 Score=50.05 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=35.4
Q ss_pred CCCEEEEEech-hHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAG-GAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaG-Gaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++++|+|+| |.|.+++..+...|++|+++.|+.++.+.+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 185 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL 185 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 57899999997 899999998889999999999987776543
No 279
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=91.92 E-value=0.15 Score=50.02 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=31.4
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+|+|+|+|.+|.+++..|++.|.+|+|+.|..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3589999999999999999999999999999864
No 280
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=91.89 E-value=1.2 Score=42.41 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHhcCCCEE-EEE----ec-CCCC---CCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVV-EIR----LD-CINN---FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEAL 91 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~v-ElR----lD-~l~~---~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 91 (409)
+..++. +.+.+.|+|+| +++ .+ .+.. ....+.+..+++..++|++.-.|... .+..
T Consensus 29 ~~~~~a---~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~------------~~~~ 93 (305)
T 2nv1_A 29 INAEQA---KIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGH------------IVEA 93 (305)
T ss_dssp SSHHHH---HHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTC------------HHHH
T ss_pred CHHHHH---HHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccc------------hHHH
Confidence 444444 44456799999 775 22 1221 11234667777777999998776421 2234
Q ss_pred HHHHHcCCcEEEEeccC-ccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 92 HLAEDLGADYVDFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 92 ~~~~~~g~dyvDiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
+.+.+.|+|.|+ .... ..+.+.+++..+.-+..++++.|+ .++. . +..+.|+|++++-
T Consensus 94 ~~~~a~GAd~V~-~~~~l~~~~~~~~i~~~~~g~~v~~~~~~------~~e~---~-~a~~~Gad~V~~~ 152 (305)
T 2nv1_A 94 RVLEAMGVDYID-ESEVLTPADEEFHLNKNEYTVPFVCGCRD------LGEA---T-RRIAEGASMLRTK 152 (305)
T ss_dssp HHHHHHTCSEEE-ECTTSCCSCSSCCCCGGGCSSCEEEEESS------HHHH---H-HHHHTTCSEEEEC
T ss_pred HHHHHCCCCEEE-EeccCCHHHHHHHHHHhccCCcEEEEeCC------HHHH---H-HHHHCCCCEEEec
Confidence 455568999997 3221 111122222223446788988885 2333 2 2347899999884
No 281
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.89 E-value=7.2 Score=36.62 Aligned_cols=149 Identities=10% Similarity=0.142 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC-----CChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF-----QPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE 95 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~-----~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~ 95 (409)
+.++.++-++.+.+.|.+.||.=-=.-... ++.+.++.+.+..+.|+..-+ . + .+-++.++
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~---------n----~~~i~~a~ 89 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-P---------N----MKGYEAAA 89 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-S---------S----HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-C---------C----HHHHHHHH
Confidence 557777777777788999999853111110 112233333333356664433 1 1 24567888
Q ss_pred HcCCcEEEEeccCc------------cchH---HHHH-hccCCCcEEE--Eecc----CCCCCCCHhHHHHHHHHHHHcC
Q 015310 96 DLGADYVDFELKVA------------SNIL---GKQY-SSHQSGTRFI--VSCN----LDCETPSEEDLGYLVSRMQATG 153 (409)
Q Consensus 96 ~~g~dyvDiEl~~~------------~~~~---~~l~-~~~~~~~kiI--~S~H----~f~~tp~~~~l~~~~~~~~~~g 153 (409)
+.|++.|-|-.... ++.+ .+.+ .+++.+.++- +|+= +...+ +.+++.++++.+.+.|
T Consensus 90 ~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~-~~~~~~~~~~~~~~~G 168 (295)
T 1ydn_A 90 AAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPV-TPQAVASVTEQLFSLG 168 (295)
T ss_dssp HTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEEC-CHHHHHHHHHHHHHHT
T ss_pred HCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCC-CHHHHHHHHHHHHhcC
Confidence 89999888875332 1122 2223 4566788876 3321 11122 3578999999999999
Q ss_pred CCEEEEEeec--CCHhHHHHHHHHhccC-C-CCEE
Q 015310 154 ADIIKLVFSV--NDITEIARIFQLLSHC-Q-VPII 184 (409)
Q Consensus 154 aDivKia~~~--~~~~D~~~ll~~~~~~-~-~p~i 184 (409)
+|.+-++-+. .++.++.++++.+.+. + .|+.
T Consensus 169 ~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~ 203 (295)
T 1ydn_A 169 CHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLA 203 (295)
T ss_dssp CSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEE
T ss_pred CCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEE
Confidence 9999998433 3688888888876543 3 4554
No 282
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=91.87 E-value=2.7 Score=40.39 Aligned_cols=145 Identities=17% Similarity=0.216 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCC-C-------ChhHHHHH-------HhcCCCcEEEEeccCCCCCCCCCCH
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNF-Q-------PGKDLEII-------LTKKPLPVLIVYRPKWAGGLYEGDE 84 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~-~-------~~~~l~~l-------~~~~~~PiI~T~R~~~eGG~~~~~~ 84 (409)
.+.+++++.+++..+.|||+|.+=...-.+. . ..+++.++ ++..+.||-+-
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISID-------------- 111 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVD-------------- 111 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEE--------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEe--------------
Confidence 4678899999999999999998876543321 1 12333332 23345554322
Q ss_pred HHHHHHHHHHHHcCCcEE-EEeccCccchHHHHHhccCCCcEEEEeccCCCCCCC--------------HhHHHHHHHHH
Q 015310 85 HKRLEALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPS--------------EEDLGYLVSRM 149 (409)
Q Consensus 85 ~~~~~ll~~~~~~g~dyv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~--------------~~~l~~~~~~~ 149 (409)
..+-+..+++++.|+++| ||--...++.++ +. .+.+..+|+. | ..++|. .+.+.+.++.+
T Consensus 112 T~~~~Va~aAl~aGa~iINDVsg~~~~~m~~-v~--a~~g~~vVlM-h-~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a 186 (314)
T 3tr9_A 112 TSRPRVMREAVNTGADMINDQRALQLDDALT-TV--SALKTPVCLM-H-FPSETRKPGSTTHFYFLQSVKKELQESIQRC 186 (314)
T ss_dssp CSCHHHHHHHHHHTCCEEEETTTTCSTTHHH-HH--HHHTCCEEEE-C-CCCTTCCTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEECCCCCchHHHH-HH--HHhCCeEEEE-C-CCCCCcccccccccchHHHHHHHHHHHHHHH
Confidence 133467888999998876 454333333333 22 2356778875 4 345664 23467778889
Q ss_pred HHcCCCEEEEE-----e---ecCCHhHHHHHHHHhcc---CCCCE
Q 015310 150 QATGADIIKLV-----F---SVNDITEIARIFQLLSH---CQVPI 183 (409)
Q Consensus 150 ~~~gaDivKia-----~---~~~~~~D~~~ll~~~~~---~~~p~ 183 (409)
.+.|.+-=+|. . ..++.++++.+++-+.. .+.|+
T Consensus 187 ~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~Pv 231 (314)
T 3tr9_A 187 KKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPV 231 (314)
T ss_dssp HHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCB
T ss_pred HHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCE
Confidence 99996422333 2 56788889888877543 36674
No 283
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.86 E-value=0.17 Score=49.42 Aligned_cols=40 Identities=33% Similarity=0.542 Sum_probs=35.5
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|++|.+++..+..+|+ +|++++++.+|.+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~ 230 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAR 230 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 57899999999999999998888999 89999998887654
No 284
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=91.83 E-value=0.1 Score=52.79 Aligned_cols=35 Identities=31% Similarity=0.325 Sum_probs=32.1
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
.+++++|||+|.+|.++++.|.+.|.+|+|+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 46789999999999999999999999999999863
No 285
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=91.82 E-value=0.13 Score=50.19 Aligned_cols=40 Identities=25% Similarity=0.395 Sum_probs=36.7
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|..+|++|+.++|+.++
T Consensus 144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~ 183 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP 183 (343)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG
T ss_pred cccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh
Confidence 4678999999999999999999999999999999998654
No 286
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=91.80 E-value=1.7 Score=39.72 Aligned_cols=112 Identities=11% Similarity=0.081 Sum_probs=73.2
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecC--C-CCCCC-hhHHHHHHhc--CCCcEEEEeccCCCCCCCCC
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDC--I-NNFQP-GKDLEIILTK--KPLPVLIVYRPKWAGGLYEG 82 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~--l-~~~~~-~~~l~~l~~~--~~~PiI~T~R~~~eGG~~~~ 82 (409)
.+++|+-+|..-|...+.++++.+.+.|+|++.+++=- | ++..- .+.++.+++. .++|+-+.+-..
T Consensus 3 ~~~~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~-------- 74 (228)
T 3ovp_A 3 SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVS-------- 74 (228)
T ss_dssp -CCEEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECS--------
T ss_pred CCcEeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeC--------
Confidence 45889999999999989888988888899999887631 1 22221 2467777766 588988877642
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEecc
Q 015310 83 DEHKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCN 131 (409)
Q Consensus 83 ~~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H 131 (409)
+.+.| ++.+.+.|+|+|=+=....+...+.+...++.+.++.++.+
T Consensus 75 ~p~~~---i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~ 120 (228)
T 3ovp_A 75 KPEQW---VKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120 (228)
T ss_dssp CGGGG---HHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHH---HHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEc
Confidence 23334 45567789999887554433322222233445666666665
No 287
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=91.79 E-value=2.1 Score=39.54 Aligned_cols=108 Identities=17% Similarity=0.091 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecCCC------CCCCh------hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHH
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDCIN------NFQPG------KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~l~------~~~~~------~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (409)
+++...+++++..|+++|=+|---.. ..+.. +++..+.+..+.|+|+.-| .+
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~---------------~~- 106 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR---------------AD- 106 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC---------------HH-
T ss_pred chHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH---------------HH-
Confidence 34677777888899999999975411 01121 2233333556899998632 22
Q ss_pred HHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 91 LHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 91 l~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
.+.+.|+|.|=+.-.... ...++.....+..+-+|.|+ .+| +.++.+.|+|++.+-
T Consensus 107 --lA~~~gAdGVHLg~~dl~--~~~~r~~~~~~~~iG~S~ht------~~E----a~~A~~~GaDyI~vg 162 (243)
T 3o63_A 107 --IARAAGADVLHLGQRDLP--VNVARQILAPDTLIGRSTHD------PDQ----VAAAAAGDADYFCVG 162 (243)
T ss_dssp --HHHHHTCSEEEECTTSSC--HHHHHHHSCTTCEEEEEECS------HHH----HHHHHHSSCSEEEEC
T ss_pred --HHHHhCCCEEEecCCcCC--HHHHHHhhCCCCEEEEeCCC------HHH----HHHHhhCCCCEEEEc
Confidence 266778999887654432 11222222456667789885 234 344556899999984
No 288
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.77 E-value=0.17 Score=48.93 Aligned_cols=40 Identities=23% Similarity=0.261 Sum_probs=35.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|.+|||+|+|++|.+++..+...|+ +|++++++.+|.+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~ 206 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDI 206 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHH
Confidence 47899999999999999999999999 89999999877543
No 289
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.74 E-value=0.22 Score=49.29 Aligned_cols=40 Identities=28% Similarity=0.303 Sum_probs=35.8
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|.+|||+|+|++|.+++..+..+|+ +|++++++.+|.+.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 253 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNL 253 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 57899999999999999999999999 89999999887654
No 290
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=91.74 E-value=6.6 Score=37.32 Aligned_cols=155 Identities=15% Similarity=0.171 Sum_probs=95.9
Q ss_pred CeeEEEeeccC-----------CHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCChhHHHHHH-------hcCCCcE
Q 015310 10 TTMICAPLMAQ-----------SVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLEIIL-------TKKPLPV 67 (409)
Q Consensus 10 ~~~icv~l~~~-----------~~~e~~~~~~~~~~~~aD~vElRlD~l~~----~~~~~~l~~l~-------~~~~~Pi 67 (409)
+|+|.--|.-+ +.+++++.+++..+.|||+|.+-...-.. .+..+++.++. +..+.|+
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpi 118 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPI 118 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCE
T ss_pred CCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceE
Confidence 56665555432 36788888999899999999888765321 22234444332 3347776
Q ss_pred EEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEE-EEeccC-ccchHHHHHhccCCCcEEEEeccCCCCCCC-------
Q 015310 68 LIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYV-DFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPS------- 138 (409)
Q Consensus 68 I~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyv-DiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~------- 138 (409)
.+-- .+-+..+++++.|+++| ||-... .++.++ +. .+.+..+|+.+ . .++|.
T Consensus 119 SIDT--------------~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~-~a--a~~g~~vVlmh-~-~G~p~y~d~v~e 179 (297)
T 1tx2_A 119 SIDT--------------YKAEVAKQAIEAGAHIINDIWGAKAEPKIAE-VA--AHYDVPIILMH-N-RDNMNYRNLMAD 179 (297)
T ss_dssp EEEC--------------SCHHHHHHHHHHTCCEEEETTTTSSCTHHHH-HH--HHHTCCEEEEC-C-CSCCCCSSHHHH
T ss_pred EEeC--------------CCHHHHHHHHHcCCCEEEECCCCCCCHHHHH-HH--HHhCCcEEEEe-C-CCCCCcchHHHH
Confidence 5432 23457788888898887 554433 333333 22 23567777774 3 67777
Q ss_pred -HhHHHHHHHHHHHcCCCEEEEEe-----ecCCHhHHHHHHHHhccC---CCCE
Q 015310 139 -EEDLGYLVSRMQATGADIIKLVF-----SVNDITEIARIFQLLSHC---QVPI 183 (409)
Q Consensus 139 -~~~l~~~~~~~~~~gaDivKia~-----~~~~~~D~~~ll~~~~~~---~~p~ 183 (409)
.+.+.+.++.+.+.|-+-=+|.. ..++.++++.+++-+... +.|+
T Consensus 180 v~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pv 233 (297)
T 1tx2_A 180 MIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPV 233 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCB
T ss_pred HHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 35577788888888854223554 356788898888876543 5564
No 291
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.72 E-value=0.22 Score=48.86 Aligned_cols=41 Identities=32% Similarity=0.337 Sum_probs=36.1
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
.|++|||+|+|+.|.+++..+..+|+ +|+++.|+.++.+.+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~ 236 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA 236 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence 47899999999999999999999995 999999998876543
No 292
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.70 E-value=0.11 Score=49.03 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=31.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
..++++|||+|.+|.++++.|.+.|.+|+|+.+.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3478999999999999999999999999999984
No 293
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.69 E-value=3.6 Score=38.58 Aligned_cols=106 Identities=20% Similarity=0.228 Sum_probs=61.8
Q ss_pred EeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---------------------hHHHHHHhc-CCCcEEEE-e
Q 015310 15 APLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---------------------KDLEIILTK-KPLPVLIV-Y 71 (409)
Q Consensus 15 v~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---------------------~~l~~l~~~-~~~PiI~T-~ 71 (409)
++.-.|+.+...+.++.+.+.|+|+||+=+-+-++..+. +.++++++. .++|+++- +
T Consensus 26 i~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y 105 (271)
T 3nav_A 26 VTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMY 105 (271)
T ss_dssp EETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 344568889998888888888999999999874433221 234445544 68898764 3
Q ss_pred ccC-CCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEe
Q 015310 72 RPK-WAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVS 129 (409)
Q Consensus 72 R~~-~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S 129 (409)
-.. -..| ..++++.+.+.|+|.+=+ .+.+.+-..++. ..++.+...|.-
T Consensus 106 ~n~v~~~g--------~~~f~~~~~~aGvdGvIi-pDlp~ee~~~~~~~~~~~gl~~I~l 156 (271)
T 3nav_A 106 ANLVYARG--------IDDFYQRCQKAGVDSVLI-ADVPTNESQPFVAAAEKFGIQPIFI 156 (271)
T ss_dssp HHHHHHTC--------HHHHHHHHHHHTCCEEEE-TTSCGGGCHHHHHHHHHTTCEEEEE
T ss_pred CcHHHHHh--------HHHHHHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 211 0111 145677888889887544 222222222333 234456665533
No 294
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=91.68 E-value=0.71 Score=41.83 Aligned_cols=125 Identities=17% Similarity=0.154 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCC-CC---hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 24 QVLSNMYQAKAEGADVVEIRLDCINNF-QP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 24 e~~~~~~~~~~~~aD~vElRlD~l~~~-~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
+....++.+.+.|+|.++++ |.-... .. .+.++.+++..++|+++. ||.. +.++ .+.+++.|+
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~-~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~------g~i~--~~~~----~~~~~~~Ga 100 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAIL-DITAAPEGRATFIDSVKRVAEAVSIPVLVG------GGVR--SLED----ATTLFRAGA 100 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEE-ECCCCTTTHHHHHHHHHHHHHHCSSCEEEE------SSCC--SHHH----HHHHHHHTC
T ss_pred cHHHHHHHHHHcCCCEEEEE-eCCccccCCcccHHHHHHHHHhcCCCEEEE------CCCC--CHHH----HHHHHHcCC
Confidence 45555666677899999997 332211 11 234556666678999974 2322 2332 245566799
Q ss_pred cEEEEeccC--ccchHHHHHhccC-CCcEEEEeccC-----CCCCC-----CHhHHHHHHHHHHHcCCCEEEEEe
Q 015310 100 DYVDFELKV--ASNILGKQYSSHQ-SGTRFIVSCNL-----DCETP-----SEEDLGYLVSRMQATGADIIKLVF 161 (409)
Q Consensus 100 dyvDiEl~~--~~~~~~~l~~~~~-~~~kiI~S~H~-----f~~tp-----~~~~l~~~~~~~~~~gaDivKia~ 161 (409)
|.|.+--.. ..+.+.++..... ....+-++.+. .-.+. +..+..+.++.+.+.|+|.+.+-.
T Consensus 101 d~V~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~ 175 (253)
T 1h5y_A 101 DKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTS 175 (253)
T ss_dssp SEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEE
T ss_pred CEEEEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEec
Confidence 999975433 2233333332111 11333334331 00000 112455667788888999988753
No 295
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.65 E-value=0.2 Score=48.96 Aligned_cols=40 Identities=33% Similarity=0.365 Sum_probs=35.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|++|||+|+|+.|.+++..+..+|+ +|++++++.+|.+.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~ 230 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLEL 230 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 47899999999999999988888999 79999999887654
No 296
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=91.61 E-value=1.7 Score=40.61 Aligned_cols=127 Identities=15% Similarity=0.174 Sum_probs=70.4
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHH---hcCCCcEEEEeccCCCCCCCCCCHH
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEH 85 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (409)
+.|.|..+-..++.++..+.+. ..|+|++|+=+-+.+.... .+..++ +..+.|++... -|. .+.+
T Consensus 12 ~~~~~~~t~g~p~~~~~~~~l~---~~Gad~ielg~pr~~~~g~--~~~~~~~~l~~~~~~~~pn~-----~~~--~~~~ 79 (264)
T 1xm3_A 12 QSRLLLGTGKYPSFDIQKEAVA---VSESDILTFAVRRMNIFEA--SQPNFLEQLDLSKYTLLPNT-----AGA--STAE 79 (264)
T ss_dssp SCCEEEECSCSSCHHHHHHHHH---HHTCSEEEEETTSSTTC---------CTTCCGGGSEEEEEC-----TTC--SSHH
T ss_pred cCCCEEEecCCCCHHHHHHHHH---HcCCeEEEEcccccccCCC--CHHHHHHHHHhcCCeEcCCc-----ccc--CCHH
Confidence 4678888889999999876454 4599999997643321011 122222 22355655432 233 2455
Q ss_pred HHHHHHHHHHHcC-CcEEEEeccCcc----chHHHHH-hccC---CCcEEE-EeccCCCCCCCHhHHHHHHHHHHHcCCC
Q 015310 86 KRLEALHLAEDLG-ADYVDFELKVAS----NILGKQY-SSHQ---SGTRFI-VSCNLDCETPSEEDLGYLVSRMQATGAD 155 (409)
Q Consensus 86 ~~~~ll~~~~~~g-~dyvDiEl~~~~----~~~~~l~-~~~~---~~~kiI-~S~H~f~~tp~~~~l~~~~~~~~~~gaD 155 (409)
++..+.+.+.+.| .++|-+|+--.. +...+++ .+++ .+..++ ++.|+ .+ ..+++.+.|+|
T Consensus 80 ~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~------~~----~a~~~~~~gad 149 (264)
T 1xm3_A 80 EAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDD------VV----LARKLEELGVH 149 (264)
T ss_dssp HHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSC------HH----HHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCC------HH----HHHHHHHhCCC
Confidence 6556777777765 778766653321 1112222 2222 366777 66553 22 35566678999
Q ss_pred EE
Q 015310 156 II 157 (409)
Q Consensus 156 iv 157 (409)
++
T Consensus 150 ~v 151 (264)
T 1xm3_A 150 AI 151 (264)
T ss_dssp CB
T ss_pred EE
Confidence 88
No 297
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.60 E-value=0.59 Score=46.76 Aligned_cols=52 Identities=17% Similarity=0.151 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHh-CCCeE-EEEeC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKS-RGARV-VIFDI 399 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~-~G~~i-~v~nR 399 (409)
++|.+.+++..+.+.+ .+++|++++|.|.|.+|+.++.-|.+ +|++| .|.++
T Consensus 189 g~Gv~~~~~~~~~~~g---------~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 189 GRGVKVCAGLAMDVLG---------IDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHHTT---------CCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHHcC---------CCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 4677778777765433 57889999999999999999999999 99964 48877
No 298
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.58 E-value=3.6 Score=38.31 Aligned_cols=126 Identities=21% Similarity=0.162 Sum_probs=77.1
Q ss_pred HHHHHHHhcCCCEEEEEecCCCCCCCh---hHHHHHH---hcCCCcEEEEeccCCCCCCCC--CCHHHHHHHHHHHHHcC
Q 015310 27 SNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIIL---TKKPLPVLIVYRPKWAGGLYE--GDEHKRLEALHLAEDLG 98 (409)
Q Consensus 27 ~~~~~~~~~~aD~vElRlD~l~~~~~~---~~l~~l~---~~~~~PiI~T~R~~~eGG~~~--~~~~~~~~ll~~~~~~g 98 (409)
.+++++.+.|+|.|-+|+.+=.. +.. +.+.+++ +...+|+|+.... .|.... .++++-.+..+.+.+.|
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~-~~~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~~~~~~s~~~i~~a~~~a~~~G 172 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSG-FEWKMFEELARIKRDAVKFDLPLVVESFP--RGGKVVNETAPEIVAYAARIALELG 172 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTST-THHHHHHHHHHHHHHHHHHTCCEEEEECC--CSTTCCCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEEEecCCc-CHHHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCccccCCCHHHHHHHHHHHHHcC
Confidence 45667778899999999844322 222 2223333 2348899988654 344332 25565555568888999
Q ss_pred CcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEE
Q 015310 99 ADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIK 158 (409)
Q Consensus 99 ~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivK 158 (409)
+|||=+.+....+.++.+...- +.++|++|==. +.-+.++..+.+....+.||+-+=
T Consensus 173 AD~vkt~~~~~~e~~~~~~~~~-~~~pV~asGGi--~~~~~~~~l~~i~~~~~aGA~Gvs 229 (263)
T 1w8s_A 173 ADAMKIKYTGDPKTFSWAVKVA-GKVPVLMSGGP--KTKTEEDFLKQVEGVLEAGALGIA 229 (263)
T ss_dssp CSEEEEECCSSHHHHHHHHHHT-TTSCEEEECCS--CCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHhC-CCCeEEEEeCC--CCCCHHHHHHHHHHHHHcCCeEEE
Confidence 9999999643334556565332 22255555211 111467888888888889998443
No 299
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.57 E-value=0.63 Score=41.77 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=54.0
Q ss_pred HHHHHHHhcCCCEEEEEecCCCCCCChh---HHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEE
Q 015310 27 SNMYQAKAEGADVVEIRLDCINNFQPGK---DLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVD 103 (409)
Q Consensus 27 ~~~~~~~~~~aD~vElRlD~l~~~~~~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvD 103 (409)
..++.+.+.|+|+|++|..- .+..+ .+..+.+..+.++|+.-+ .+.+.+.|++.|=
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~---~~~~~~~~~i~~l~~~~~~~livnd~------------------~~~A~~~gadgvh 75 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPE---TPAMYSERLLTLIPEKYHRRIVTHEH------------------FYLKEEFNLMGIH 75 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSS---CCHHHHHHHHHHSCGGGGGGEEESSC------------------TTHHHHTTCSEEE
T ss_pred HHHHHHHHCCCCEEEEccCC---CCHHHHHHHHHHHHHHhCCeEEEeCC------------------HHHHHHcCCCEEE
Confidence 55777788999999999432 22221 222222334677776311 1456678899985
Q ss_pred EeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 104 FELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 104 iEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
+--+..+ . ....+..+..|.|+ .+|+ .++. .|||++++
T Consensus 76 l~~~~~~-----~--~~~~~~~ig~s~~t------~~e~----~~A~-~GaDyv~~ 113 (210)
T 3ceu_A 76 LNARNPS-----E--PHDYAGHVSCSCHS------VEEV----KNRK-HFYDYVFM 113 (210)
T ss_dssp CCSSSCS-----C--CTTCCSEEEEEECS------HHHH----HTTG-GGSSEEEE
T ss_pred ECccccc-----c--ccccCCEEEEecCC------HHHH----HHHh-hCCCEEEE
Confidence 4222111 0 01135678889885 2343 3344 79999997
No 300
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=91.52 E-value=0.23 Score=49.21 Aligned_cols=40 Identities=28% Similarity=0.360 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|...|++|++++|+.++
T Consensus 112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~ 151 (380)
T 2o4c_A 112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQA 151 (380)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHH
T ss_pred cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhh
Confidence 4678999999999999999999999999999999987653
No 301
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=91.48 E-value=0.27 Score=47.06 Aligned_cols=125 Identities=14% Similarity=0.187 Sum_probs=75.6
Q ss_pred HHHHHhcCCCceEeecCc----ccHHHHHHHh-cCCCCCeEEEcccchH-----HHHhhhhhhcHH--HHHhccceEEEE
Q 015310 258 NPTFRHVNYNGIYVPMFV----DDLKKFFSTY-SSPDFAGFSVGFPYKE-----AVMKFCDEVHPL--AQAIAAVNTIIR 325 (409)
Q Consensus 258 n~~f~~~gl~~~y~~~~~----~~l~~~~~~~-~~~~~~G~nVT~P~K~-----~i~~~~d~~~~~--A~~igAvNti~~ 325 (409)
.+..+++|+......++. +++.+.++.+ .++.+.|+-|-.|.-. .++..++ +. +.-....|.=..
T Consensus 75 ~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~---p~KDVDG~hp~N~G~L 151 (303)
T 4b4u_A 75 GNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAIS---LAKDVDGVTCLGFGRM 151 (303)
T ss_dssp HHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSC---GGGCTTCCCHHHHHHH
T ss_pred HHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccC---cccccCccCcchHHHh
Confidence 456789999987666653 3677777777 5788999999999732 2221111 10 000000110000
Q ss_pred eCCCCeEEEEcCcHHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechh-HHHHHHHHHHhCCCeEEEEeCC
Q 015310 326 RPSDGKLIGYNTDCEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGG-AGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 326 ~~~~g~l~G~NTD~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGG-aarai~~aL~~~G~~i~v~nR~ 400 (409)
.. +...+ .-.--.|++..|++. +.+++||+++|+|.+. +||.++.-|.+.|+.|+++...
T Consensus 152 ~~-g~~~~-~PcTp~gv~~lL~~~-------------~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~ 212 (303)
T 4b4u_A 152 AM-GEAAY-GSATPAGIMTILKEN-------------NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR 212 (303)
T ss_dssp HT-TCCCC-CCHHHHHHHHHHHHT-------------TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cC-CCCcc-cCccHHHHHHHHHHH-------------CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCC
Confidence 00 00000 001125777776543 3689999999999766 9999999999999999998643
No 302
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.44 E-value=0.18 Score=50.61 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=35.9
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++|||.|+ ||.|.+++..+...|++++++.++.+|.+.+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 5789999998 9999999999999999888888988876654
No 303
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.42 E-value=0.099 Score=51.30 Aligned_cols=39 Identities=13% Similarity=0.073 Sum_probs=34.9
Q ss_pred CEEEEEechhHHHHHHHHHHhCC-------CeEEEEeCChH-----HHHhh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRG-------ARVVIFDIDFE-----QSLLL 407 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G-------~~i~v~nR~~~-----ka~~l 407 (409)
.++.|||+|.+|.+++..|.+.| .+|++++|+.+ +++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l 72 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDII 72 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHH
Confidence 46999999999999999999999 79999999988 77655
No 304
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=91.38 E-value=0.16 Score=50.58 Aligned_cols=39 Identities=15% Similarity=-0.037 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..+.|+++.|+|.|.+|++++..|..+|++|++++|+.+
T Consensus 187 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~ 225 (393)
T 2nac_A 187 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRL 225 (393)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCcc
Confidence 457899999999999999999999999999999999853
No 305
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.35 E-value=0.2 Score=47.94 Aligned_cols=40 Identities=23% Similarity=0.240 Sum_probs=34.5
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC--hHHHHhh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID--FEQSLLL 407 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~--~~ka~~l 407 (409)
..++.|||+|-+|.+++..|.+.|. +|+++||+ .++.+.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~ 66 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRA 66 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHH
Confidence 4689999999999999999999999 99999997 4665543
No 306
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.34 E-value=5.3 Score=37.81 Aligned_cols=143 Identities=14% Similarity=0.069 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
.+.+++.+-++++.+.+++.|=+.--+ .....+.++..++++. |+-.-+.|.. +-+.+..-.+.+++.|+
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~P~~------V~~a~~~L~~s~V~V~-tVigFP~G~~---~~~~Kv~Ea~~Ai~~GA 140 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVRPDY------VSRAVQYLQGTQVGVT-CVIGFHEGTY---STDQKVSEAKRAMQNGA 140 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGGG------HHHHHHHTTTSSCEEE-EEESTTTSCS---CHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHHH------HHHHHHHcCCCCCeEE-EEeCCCCCCC---cHHHHHHHHHHHHHcCC
Confidence 457888888888888888877332111 1223333333455544 5533233222 33556666678999999
Q ss_pred cEEEEeccCcc-------c---hHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe----ecC
Q 015310 100 DYVDFELKVAS-------N---ILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF----SVN 164 (409)
Q Consensus 100 dyvDiEl~~~~-------~---~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~----~~~ 164 (409)
|-||+=++... . .++.+..+ +....|+|+---. .+.+++....+-+.+.|||+||-.+ -..
T Consensus 141 dEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~----Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GA 216 (288)
T 3oa3_A 141 SELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ----LTADEIIAGCVLSSLAGADYVKTSTGFNGPGA 216 (288)
T ss_dssp SEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG----CCHHHHHHHHHHHHHTTCSEEECCCSSSSCCC
T ss_pred CEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC----CCHHHHHHHHHHHHHcCCCEEEcCCCCCCCCC
Confidence 99997555421 1 22333322 3334788886543 3467888888888899999999874 245
Q ss_pred CHhHHHHHHHHh
Q 015310 165 DITEIARIFQLL 176 (409)
Q Consensus 165 ~~~D~~~ll~~~ 176 (409)
+.+|+..+.+..
T Consensus 217 T~edv~lmr~~v 228 (288)
T 3oa3_A 217 SIENVSLMSAVC 228 (288)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 678886665554
No 307
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.32 E-value=0.23 Score=50.08 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=35.8
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhhh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLLL 408 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~la 408 (409)
.++.|+|+|-+|.+++..|++ |.+|++++|++++++.+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~ 75 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLN 75 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHh
Confidence 489999999999999999998 999999999999988764
No 308
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.29 E-value=0.26 Score=47.66 Aligned_cols=41 Identities=29% Similarity=0.366 Sum_probs=36.0
Q ss_pred CCCEEEEE-echhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvl-GaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|+++||+ |+|+.|.+++..+...|++|+++.++.++.+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 191 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT 191 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 57899999 689999999999999999999999988876543
No 309
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.22 E-value=0.2 Score=48.71 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=37.0
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC--eEEEEeCChHHHHhhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA--RVVIFDIDFEQSLLLL 408 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~--~i~v~nR~~~ka~~la 408 (409)
..+++.|+|+|.+|.++++.|+..|. +|.+++++.++++..+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a 63 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEM 63 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHH
Confidence 45789999999999999999999996 8999999998877643
No 310
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.19 E-value=0.22 Score=50.32 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.5
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++|+|||+|-+|.++++.|.+.|.+|+|+.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 568999999999999999999999999999775
No 311
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.17 E-value=0.22 Score=47.86 Aligned_cols=33 Identities=30% Similarity=0.550 Sum_probs=31.5
Q ss_pred CEEEEEechhHHHHHHHHHHhCC-CeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G-~~i~v~nR~~ 401 (409)
.++.|||+|-+|.+++..|.+.| .+|+++||+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 68999999999999999999999 7999999997
No 312
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.13 E-value=0.3 Score=46.90 Aligned_cols=40 Identities=33% Similarity=0.374 Sum_probs=34.0
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~~~ka~~ 406 (409)
.|.+++|+|+||.+-.++..++.+|. +|+.++++++|.+.
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~ 203 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNL 203 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhh
Confidence 57899999999999888888887765 99999999887653
No 313
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=91.09 E-value=0.22 Score=49.11 Aligned_cols=38 Identities=29% Similarity=0.338 Sum_probs=35.3
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+.|+++.|+|-|.+|++++..|..+|++|+.++|+.
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~ 209 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL 209 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCC
Confidence 46789999999999999999999999999999999974
No 314
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.00 E-value=0.2 Score=53.09 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.8
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
...|+|||+|.+|.++|+.|++.|.+|+|+.+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 304 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCAD 304 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 368999999999999999999999999999985
No 315
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=90.96 E-value=2.5 Score=39.74 Aligned_cols=141 Identities=10% Similarity=0.065 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHc
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (409)
+.+++++.+++..+.|||+|-+-...-...+.. ..++.+++..+.|+.+-- .+-+.++++++.
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT--------------~~~~v~~aal~a 97 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDS--------------TNPDAIEAGLKV 97 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEEC--------------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeC--------------CCHHHHHHHHHh
Confidence 467788888888899999999998873321111 122333344578865431 134677888888
Q ss_pred --CCcEE-EEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCC-----HhHHHHHHHHHHHcCCCEEEEEe-----e-
Q 015310 98 --GADYV-DFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPS-----EEDLGYLVSRMQATGADIIKLVF-----S- 162 (409)
Q Consensus 98 --g~dyv-DiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~-----~~~l~~~~~~~~~~gaDivKia~-----~- 162 (409)
|+++| ||-... +.+.++. ...+.+..+|+.+-+-.++|. .+.+.++++.+.+.|-+-=+|.. .
T Consensus 98 ~~Ga~iINdvs~~~--d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfi 175 (271)
T 2yci_X 98 HRGHAMINSTSADQ--WKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPV 175 (271)
T ss_dssp CCSCCEEEEECSCH--HHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCT
T ss_pred CCCCCEEEECCCCc--cccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCcc
Confidence 98876 576543 2112222 223457788888655467775 34466777778887753101222 2
Q ss_pred cCCHhHHHHHHHHhc
Q 015310 163 VNDITEIARIFQLLS 177 (409)
Q Consensus 163 ~~~~~D~~~ll~~~~ 177 (409)
.++.+.++.+++.+.
T Consensus 176 gk~~~~~~~~l~~l~ 190 (271)
T 2yci_X 176 NVAQEHAVEVLETIR 190 (271)
T ss_dssp TTSTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 345666666665544
No 316
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=90.90 E-value=7.7 Score=36.57 Aligned_cols=144 Identities=12% Similarity=0.184 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC----CChhHHHHH-------HhcCCCcEEEEeccCCCCCCCCCCHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF----QPGKDLEII-------LTKKPLPVLIVYRPKWAGGLYEGDEHKRLE 89 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~----~~~~~l~~l-------~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (409)
+.+++++.+++..+.|||+|.+=...-.+. +..+++.++ ++..+.|+-+- | .+-+
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSID--T------------~~~~ 101 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVD--T------------SKPE 101 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE--C------------CCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEe--C------------CCHH
Confidence 368899999999999999998888654222 112334333 23346665432 1 2345
Q ss_pred HHHHHHHcCCcEE-EEeccCccchHHHHHhccCCCcEEEEeccCCCCCCC---------------HhHHHHHHHHHHHcC
Q 015310 90 ALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPS---------------EEDLGYLVSRMQATG 153 (409)
Q Consensus 90 ll~~~~~~g~dyv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~---------------~~~l~~~~~~~~~~g 153 (409)
..+++++.|+++| ||-....++.++ +. .+.+..+|+.+ . .++|. .+.+.+.++++.+.|
T Consensus 102 va~aAl~aGa~iINdvsg~~d~~~~~-~~--a~~~~~vVlmh-~-~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~G 176 (282)
T 1aj0_A 102 VIRESAKVGAHIINDIRSLSEPGALE-AA--AETGLPVCLMH-M-QGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAG 176 (282)
T ss_dssp HHHHHHHTTCCEEEETTTTCSTTHHH-HH--HHHTCCEEEEC-C-SSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCCCCCHHHHH-HH--HHhCCeEEEEc-c-CCCCccccccCccchHHHHHHHHHHHHHHHHHHcC
Confidence 7888999999887 665434444443 22 23567788774 3 55664 556788888899988
Q ss_pred CCEEEEEe-----ecCCHhHHHHHHHHhccC---CCCE
Q 015310 154 ADIIKLVF-----SVNDITEIARIFQLLSHC---QVPI 183 (409)
Q Consensus 154 aDivKia~-----~~~~~~D~~~ll~~~~~~---~~p~ 183 (409)
-+-=+|.. ..++.++++.+++-+.+. +.|+
T Consensus 177 i~~~~IilDPg~gf~k~~~~n~~ll~~l~~~~~~g~P~ 214 (282)
T 1aj0_A 177 IAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPL 214 (282)
T ss_dssp CCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCB
T ss_pred CChhhEEEeCCCCcccCHHHHHHHHHHHHHHhcCCCCE
Confidence 54113443 456888998888876543 5554
No 317
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=90.85 E-value=6 Score=36.39 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
.+.+++.+-++++.+.+++.|=+.--+ .....+.++..+.++- |+=.-+.|-. +.+.+..-.+.|++.|+
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~~------v~~a~~~L~~s~v~v~-tVigFP~G~~---~~~~Kv~Ea~~Ai~~GA 109 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPTW------VPLCAELLKGTGVKVC-TVIGFPLGAT---PSEVKAYETKVAVEQGA 109 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGGG------HHHHHHHHTTSSCEEE-EEESTTTCCS---CHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHHH------HHHHHHHhCCCCCeEE-EEeccCCCCC---chHHHHHHHHHHHHcCC
Confidence 457888888888888888777332111 1233344443454444 4322222222 33556666678999999
Q ss_pred cEEEEeccCcc-------ch---HHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe----ecC
Q 015310 100 DYVDFELKVAS-------NI---LGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF----SVN 164 (409)
Q Consensus 100 dyvDiEl~~~~-------~~---~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~----~~~ 164 (409)
|-||+=++... .. ++.+..+ +..-.|+|+---. .+.+++....+-+.+.|||++|-.+ -..
T Consensus 110 dEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~----Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggA 185 (239)
T 3ngj_A 110 EEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY----LTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGA 185 (239)
T ss_dssp SEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG----SCHHHHHHHHHHHHHHTCSEEECCCSSSSCCC
T ss_pred CEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC----CCHHHHHHHHHHHHHHCcCEEECCCCCCCCCC
Confidence 99998766532 12 2333322 2234788886543 3567788888888899999999883 235
Q ss_pred CHhHHHHHHHH
Q 015310 165 DITEIARIFQL 175 (409)
Q Consensus 165 ~~~D~~~ll~~ 175 (409)
+.+|+..+.+.
T Consensus 186 t~~dv~lmr~~ 196 (239)
T 3ngj_A 186 TPEDVKLMKDT 196 (239)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 77888666554
No 318
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.76 E-value=0.23 Score=50.10 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=35.8
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|++|+|+|+ ||.|.+++..+...|++++++.++.+|.+.+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~ 269 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC 269 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 5789999998 9999999999999999888888888887654
No 319
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.74 E-value=0.21 Score=53.15 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.7
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
...|+|||+|.+|.++|+.|++.|.+|+|+.+.
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 296 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCAD 296 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCC
Confidence 357999999999999999999999999999985
No 320
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=90.73 E-value=7.1 Score=40.27 Aligned_cols=205 Identities=14% Similarity=0.074 Sum_probs=117.1
Q ss_pred HHHHHHHHHhcCCCEEEEE----ecC---CCCCCChhHHHHHHhc-CCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q 015310 25 VLSNMYQAKAEGADVVEIR----LDC---INNFQPGKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (409)
Q Consensus 25 ~~~~~~~~~~~~aD~vElR----lD~---l~~~~~~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (409)
.++-++.+.+.|.|.||.= .|. +-..++.+.+..+++. .+.++..-+|..+-=|....+++-..+.++.+.+
T Consensus 49 Kl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~ 128 (539)
T 1rqb_A 49 MVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAE 128 (539)
T ss_dssp TGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHh
Confidence 3333455556799999986 232 1122445566666653 3566666668665556555556556677889999
Q ss_pred cCCcEEEEeccCcc-chHHHHH-hccCCCcEE--EEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC--CHhHHH
Q 015310 97 LGADYVDFELKVAS-NILGKQY-SSHQSGTRF--IVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVN--DITEIA 170 (409)
Q Consensus 97 ~g~dyvDiEl~~~~-~~~~~l~-~~~~~~~ki--I~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~--~~~D~~ 170 (409)
.|++.|-|=....+ +.+...+ .+++.+.++ -+|+=+...+ +.+.+.++++++.+.|||++-|+=|.- ++.++.
T Consensus 129 aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~-~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~ 207 (539)
T 1rqb_A 129 NGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVH-TVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAY 207 (539)
T ss_dssp TTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTC-CHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHH
T ss_pred CCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCC-CHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHH
Confidence 99999887544332 1222222 345566666 4555433222 457899999999999999998875543 577777
Q ss_pred HHHHHhcc-C--CCCEEEEE---cCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhhh
Q 015310 171 RIFQLLSH-C--QVPIIAYS---VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231 (409)
Q Consensus 171 ~ll~~~~~-~--~~p~i~~~---MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~~ 231 (409)
++.+.+.+ . +.|+ .+- ..-++...=+..-..|....=+++.. +--.||.+++++...++.
T Consensus 208 ~lv~~l~~~~p~~i~I-~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g~GertGN~~lE~lv~~L~~ 274 (539)
T 1rqb_A 208 DIIKAIKDTYGQKTQI-NLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMSLGPGHNPTESVAEMLEG 274 (539)
T ss_dssp HHHHHHHHHHCTTCCE-EEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSBCBHHHHHHHTTT
T ss_pred HHHHHHHHhcCCCceE-EEEeCCCCChHHHHHHHHHHhCCCEEEEeccccCCCccChhHHHHHHHHHh
Confidence 77766543 2 3443 331 22233333333333333322222221 112677777776666553
No 321
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=90.65 E-value=2.3 Score=38.70 Aligned_cols=126 Identities=17% Similarity=0.212 Sum_probs=75.6
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHH
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRL 88 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~ 88 (409)
+...+..-|...+.++...-++.+.+.|.+++|+-+. .....+.++.+++..+.++|=- |-.. +.
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~---t~~a~~~I~~l~~~~p~~~IGA------GTVl--t~---- 75 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLR---TEAGLAAISAIKKAVPEAIVGA------GTVC--TA---- 75 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETT---STTHHHHHHHHHHHCTTSEEEE------ECCC--SH----
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCC---CccHHHHHHHHHHHCCCCeEee------cccc--CH----
Confidence 3344556678899999999899988999999999554 1222345666666555555522 2122 32
Q ss_pred HHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCc------EEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEee
Q 015310 89 EALHLAEDLGADYVDFELKVASNILGKQYSSHQSGT------RFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS 162 (409)
Q Consensus 89 ~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~------kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~ 162 (409)
+-.+.+++.|+++|=-- ...++.++. .++.+. .++--. .||+ | +.++.++|+|++|+ +
T Consensus 76 ~~a~~ai~AGA~fivsP-~~~~evi~~---~~~~~v~~~~~~~~~PG~----~Tpt--E----~~~A~~~Gad~vK~--F 139 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVSP-GLTPELIEK---AKQVKLDGQWQGVFLPGV----ATAS--E----VMIAAQAGITQLKC--F 139 (217)
T ss_dssp HHHHHHHHHTCSEEEES-SCCHHHHHH---HHHHHHHCSCCCEEEEEE----CSHH--H----HHHHHHTTCCEEEE--T
T ss_pred HHHHHHHHcCCCEEEeC-CCcHHHHHH---HHHcCCCccCCCeEeCCC----CCHH--H----HHHHHHcCCCEEEE--C
Confidence 23457788999998432 223333322 233344 555543 3553 3 33456889999997 5
Q ss_pred cCC
Q 015310 163 VND 165 (409)
Q Consensus 163 ~~~ 165 (409)
|.+
T Consensus 140 Pa~ 142 (217)
T 3lab_A 140 PAS 142 (217)
T ss_dssp TTT
T ss_pred ccc
Confidence 544
No 322
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.56 E-value=0.3 Score=47.04 Aligned_cols=41 Identities=29% Similarity=0.385 Sum_probs=34.9
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCC-CeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G-~~i~v~nR~~~ka~~l 407 (409)
.|.+++|+|+|++|.+++..+...| .+|++++++.+|.+.+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~ 212 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALA 212 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 4789999999999999988888885 5999999998886643
No 323
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=90.53 E-value=0.22 Score=48.08 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=35.6
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhC-CCeEEEEeCChHHHHhh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSR-GARVVIFDIDFEQSLLL 407 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~-G~~i~v~nR~~~ka~~l 407 (409)
...+++|||.|+ |..|++++..|.+. |.+|++++|+.++...+
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~ 65 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL 65 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh
Confidence 356789999995 88999999999998 88999999987766543
No 324
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.50 E-value=0.23 Score=53.41 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=35.3
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
++|.|||+|-+|.+++..|++.|.+|++++|++++++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~ 350 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEA 350 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 57999999999999999999999999999999887764
No 325
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.48 E-value=0.25 Score=48.90 Aligned_cols=40 Identities=23% Similarity=0.312 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+.|+++.|+|.|.+|++++..|..+|++|.+++|..+.
T Consensus 115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~ 154 (381)
T 3oet_A 115 FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAA 154 (381)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHH
T ss_pred CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHH
Confidence 5688999999999999999999999999999999986543
No 326
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=90.47 E-value=0.26 Score=50.28 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=31.4
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+|+|||+|.+|.+++..|++.|.+|+|+.+..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 5689999999999999999999999999998863
No 327
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=90.43 E-value=1.9 Score=40.54 Aligned_cols=111 Identities=19% Similarity=0.258 Sum_probs=67.2
Q ss_pred HHHHHHHHhcCCCEEEEEecC--CCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEE
Q 015310 26 LSNMYQAKAEGADVVEIRLDC--INNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVD 103 (409)
Q Consensus 26 ~~~~~~~~~~~aD~vElRlD~--l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvD 103 (409)
...++.+...||+++.+--|- |.. ..+.+..+++..++|+|.- + |-.++.+ ++.+...|+|.|=
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f~G--s~~~l~~ir~~v~lPvl~k-----d---fiid~~q----v~~A~~~GAD~Vl 140 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRFQG--SLDDLDAVRASVSIPVLRK-----D---FVVQPYQ----IHEARAHGADMLL 140 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGHHH--HHHHHHHHHHHCSSCEEEE-----S---CCCSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEecChhhcCC--CHHHHHHHHHhCCCCEEEC-----c---cccCHHH----HHHHHHcCCCEEE
Confidence 334555566899999865431 111 1245677777789999931 2 2234321 3455678999987
Q ss_pred Ee-ccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 104 FE-LKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 104 iE-l~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
+= -..+.+.+++++ ..+.-|..++++.|+ .+|+ +++.+.|+|++.+-
T Consensus 141 Li~a~l~~~~l~~l~~~a~~lGl~~lvev~t------~ee~----~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 141 LIVAALEQSVLVSMLDRTESLGMTALVEVHT------EQEA----DRALKAGAKVIGVN 189 (272)
T ss_dssp EEGGGSCHHHHHHHHHHHHHTTCEEEEEESS------HHHH----HHHHHHTCSEEEEE
T ss_pred EecccCCHHHHHHHHHHHHHCCCcEEEEcCC------HHHH----HHHHHCCCCEEEEC
Confidence 72 222233344554 345678899999986 3444 34446799999875
No 328
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=90.39 E-value=0.24 Score=48.22 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=34.1
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
+.+++++||.|+ |+.|++++..|.+.|++|++++|+.++
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 65 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE 65 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCcc
Confidence 345689999997 889999999999999999999998654
No 329
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=90.38 E-value=7.3 Score=37.06 Aligned_cols=86 Identities=9% Similarity=0.056 Sum_probs=60.5
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCC------C-----CC----hhHHHHHHhcCCCcEEEEeccCCC
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINN------F-----QP----GKDLEIILTKKPLPVLIVYRPKWA 76 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~------~-----~~----~~~l~~l~~~~~~PiI~T~R~~~e 76 (409)
.+.+.|.+.+.+++.+.++.+.+. +|.||+-+.+=.. . +. .+.++.+++..+.|+.+-+|.
T Consensus 60 ~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~--- 135 (318)
T 1vhn_A 60 NVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL--- 135 (318)
T ss_dssp TEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES---
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC---
Confidence 467899999999999999988777 9999998874221 0 01 123344555567898888886
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 77 GGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
|.- ..+ -.++.+.+.+.|+|+|.|-
T Consensus 136 -G~~-~~~--~~~~a~~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 136 -GWE-KNE--VEEIYRILVEEGVDEVFIH 160 (318)
T ss_dssp -CSS-SCC--HHHHHHHHHHTTCCEEEEE
T ss_pred -CCC-hHH--HHHHHHHHHHhCCCEEEEc
Confidence 321 221 2277888889999999984
No 330
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.36 E-value=0.32 Score=46.97 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|+++||+| +||.|.+++..+...|++|+++ ++.++.+.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~ 189 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY 189 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence 578999999 6999999999999999998888 77777554
No 331
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=90.31 E-value=0.32 Score=48.04 Aligned_cols=42 Identities=21% Similarity=0.375 Sum_probs=36.2
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCC-eEEEEeCChHHHHhh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGA-RVVIFDIDFEQSLLL 407 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~-~i~v~nR~~~ka~~l 407 (409)
++++++||.|| |+.|++++..|.+.|. +|++++|+.++...+
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~ 76 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVEL 76 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHH
Confidence 35789999996 7799999999999995 999999998876554
No 332
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=90.29 E-value=0.21 Score=49.95 Aligned_cols=34 Identities=38% Similarity=0.519 Sum_probs=31.2
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..|+|||+|.+|.++|+.|++.|.+|+|+.|...
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4699999999999999999999999999998753
No 333
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.29 E-value=9.2 Score=35.70 Aligned_cols=88 Identities=16% Similarity=0.149 Sum_probs=54.5
Q ss_pred CCeeEEEeec--cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---------------------hHHHHHHhc-CC
Q 015310 9 NTTMICAPLM--AQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---------------------KDLEIILTK-KP 64 (409)
Q Consensus 9 ~~~~icv~l~--~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---------------------~~l~~l~~~-~~ 64 (409)
+++.++.-|+ .++.+...+.++.+.+.|+|++|+=+-+-++..+. +.++++++. .+
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~ 95 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPD 95 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 4455555554 46669998888888889999999998875544321 233444544 68
Q ss_pred CcEEEEeccCCCCCCCCCCHHH--HHHHHHHHHHcCCcEEEE
Q 015310 65 LPVLIVYRPKWAGGLYEGDEHK--RLEALHLAEDLGADYVDF 104 (409)
Q Consensus 65 ~PiI~T~R~~~eGG~~~~~~~~--~~~ll~~~~~~g~dyvDi 104 (409)
+|+++-.-. +. -.. ..++++.+.+.|+|.+=+
T Consensus 96 ~Pivlm~Y~-------np-v~~~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 96 MPIGLLLYA-------NL-VFANGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp CCEEEEECH-------HH-HHHHCHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEecC-------cH-HHHhhHHHHHHHHHHcCCCEEEe
Confidence 897764211 00 011 144667777888877554
No 334
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.27 E-value=0.25 Score=53.06 Aligned_cols=39 Identities=23% Similarity=0.333 Sum_probs=35.8
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
-++|.|||+|-+|.+++..|++.|.+|++++|++++++.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~ 352 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQ 352 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 367999999999999999999999999999999987764
No 335
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.04 E-value=0.78 Score=45.98 Aligned_cols=52 Identities=29% Similarity=0.313 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCC-CCCCEEEEEechhHHHHHHHHHHh-CCCeEEEEeC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSP-LAGRMFVLAGAGGAGRALAFGAKS-RGARVVIFDI 399 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~vlvlGaGGaarai~~aL~~-~G~~i~v~nR 399 (409)
++|.+.+++..+.+. +.+ ++|+++.|+|.|.+|+.++.-|.. +|++|.-+++
T Consensus 191 g~Gv~~~~~~~~~~~---------G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD 244 (419)
T 1gtm_A 191 ARGASYTIREAAKVL---------GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSD 244 (419)
T ss_dssp HHHHHHHHHHHHHHT---------TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhHHHHHHHHHHHHh---------CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeC
Confidence 467777777766532 256 889999999999999999999999 9998776654
No 336
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=89.97 E-value=0.16 Score=52.62 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=31.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~ 400 (409)
++.+|+|+|+||.|..++..|+..|+ +|+|++.+
T Consensus 31 ~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D 65 (531)
T 1tt5_A 31 ESAHVCLINATATGTEILKNLVLPGIGSFTIIDGN 65 (531)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCC
T ss_pred hcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999 99999876
No 337
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=89.93 E-value=0.36 Score=48.48 Aligned_cols=53 Identities=17% Similarity=0.261 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEE-EEeCC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDID 400 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~-v~nR~ 400 (409)
++|.+..++..+.+.+ .+++|++++|.|.|.+|+.++.-|.++|++|+ |.+.+
T Consensus 192 g~Gv~~~~~~~~~~~g---------~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 192 GFGVAVVVRESAKRFG---------IKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp HHHHHHHHHHHHHHTT---------CCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred HHHHHHHHHHHHHhcC---------CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 4677777777665332 56889999999999999999999999999654 88887
No 338
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=89.91 E-value=0.32 Score=46.30 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=31.8
Q ss_pred CCCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..++++++||.|+ |+.|++++..|.+.|.+|++++|+.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 56 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT 56 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 3467889999995 88999999999999999999999753
No 339
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=89.36 E-value=0.061 Score=48.37 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=33.7
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..++++.|||+|.+|++++..|.+.|.+|++++|+.++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~ 54 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQV 54 (201)
Confidence 45678999999999999999999999999999998653
No 340
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=89.83 E-value=0.27 Score=46.97 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=32.0
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..++++||.|+ |..|++++..|.+.|.+|+++.|+.
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35789999996 8899999999999999999999954
No 341
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=89.69 E-value=0.28 Score=45.96 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.2
Q ss_pred CEEEEEechhHHHHHHHHHHhC-CCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSR-GARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~-G~~i~v~nR~~ 401 (409)
..++|+|+|.+|.++|+.|++. |.+|+|+.+..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999997 99999999864
No 342
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=89.68 E-value=0.34 Score=47.83 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
+.++|+|||||-+|.++++.|.+.|.+|+|+.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4578999999999999999999999999999876
No 343
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.67 E-value=0.34 Score=46.18 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=31.2
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
.+++++||.|+ |+.|++++..|.+.|.+|++++|+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46789999997 8899999999999999999999864
No 344
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=89.65 E-value=5.4 Score=37.60 Aligned_cols=173 Identities=16% Similarity=0.210 Sum_probs=96.5
Q ss_pred CCCCCeeEEEeecc-----------CCHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCChhHHHHHH---h---cCC
Q 015310 6 ITKNTTMICAPLMA-----------QSVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLEIIL---T---KKP 64 (409)
Q Consensus 6 ~~~~~~~icv~l~~-----------~~~~e~~~~~~~~~~~~aD~vElRlD~l~~----~~~~~~l~~l~---~---~~~ 64 (409)
|.+.+|+|.--|.- .+.+++++.+++..+.|||+|.+=...-.. .+..+++.++. + ..+
T Consensus 1 ~~~~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~ 80 (280)
T 1eye_A 1 MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQG 80 (280)
T ss_dssp ----CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTT
T ss_pred CCCCCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCC
Confidence 34556666655543 257889999999999999999888754321 12223344332 1 125
Q ss_pred CcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEE-EEeccC-ccchHHHHHhccCCCcEEEEeccCCCCCCC----
Q 015310 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYV-DFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPS---- 138 (409)
Q Consensus 65 ~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyv-DiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~---- 138 (409)
.||-+- ..+-+..+++++.|+++| ||--.. .++.++ +. .+.+..+|+.+- .++|.
T Consensus 81 ~piSID--------------T~~~~va~aAl~aGa~iINdvsg~~~d~~m~~-~~--a~~~~~vVlmh~--~G~p~tm~~ 141 (280)
T 1eye_A 81 ITVSID--------------TMRADVARAALQNGAQMVNDVSGGRADPAMGP-LL--AEADVPWVLMHW--RAVSADTPH 141 (280)
T ss_dssp CCEEEE--------------CSCHHHHHHHHHTTCCEEEETTTTSSCTTHHH-HH--HHHTCCEEEECC--CCSCTTCTT
T ss_pred CEEEEe--------------CCCHHHHHHHHHcCCCEEEECCCCCCCHHHHH-HH--HHhCCeEEEEcC--CCCCcchhh
Confidence 665332 133467889999999887 664333 333333 22 235677777743 34442
Q ss_pred ------------HhHHHHHHHHHHHcCCCEEEEEe-----ecCCHhHHHHHHHHhcc---CCCCEEEEEcCccchhhhhh
Q 015310 139 ------------EEDLGYLVSRMQATGADIIKLVF-----SVNDITEIARIFQLLSH---CQVPIIAYSVGERGLVSQLL 198 (409)
Q Consensus 139 ------------~~~l~~~~~~~~~~gaDivKia~-----~~~~~~D~~~ll~~~~~---~~~p~i~~~MG~~G~~SRi~ 198 (409)
.+.+.+.++.+.+.|-+-=+|.. ..++.++++.+++-+.+ .+.|+. ++.+...-+..++
T Consensus 142 ~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl-~G~Srksfi~~~~ 220 (280)
T 1eye_A 142 VPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVL-VGASRKRFLGALL 220 (280)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBE-ECCTTCHHHHHHT
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCCCEE-EEecchHHHHhhh
Confidence 34567788888888854113443 55678888888877643 356643 3444433343333
No 345
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=89.60 E-value=0.23 Score=48.35 Aligned_cols=34 Identities=24% Similarity=0.453 Sum_probs=30.8
Q ss_pred CCEEEEEechhHHHHHHHHHHh-CC-CeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKS-RG-ARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~-~G-~~i~v~nR~~ 401 (409)
...|+|||+|-+|.++|+.|++ .| .+|+|+.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3579999999999999999999 99 7999999863
No 346
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=89.59 E-value=9 Score=35.69 Aligned_cols=143 Identities=13% Similarity=0.046 Sum_probs=87.3
Q ss_pred cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015310 19 AQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG 98 (409)
Q Consensus 19 ~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g 98 (409)
..+.+++.+-++++.+.+++.|=+.--+ .....+.++..+.++- |+=.-+.|.. +.+.+..=.+.|++.|
T Consensus 55 ~~t~~~I~~lc~eA~~~~~aaVCV~p~~------V~~a~~~L~gs~v~v~-tVigFP~G~~---~~~~Kv~Ea~~Ai~~G 124 (260)
T 3r12_A 55 FATPDDIKKLCLEARENRFHGVCVNPCY------VKLAREELEGTDVKVV-TVVGFPLGAN---ETRTKAHEAIFAVESG 124 (260)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEECGGG------HHHHHHHHTTSCCEEE-EEESTTTCCS---CHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHHH------HHHHHHHhcCCCCeEE-EEecCCCCCC---cHHHHHHHHHHHHHcC
Confidence 3467888888888888888777332111 1233344444454444 4323333332 3355555567899999
Q ss_pred CcEEEEeccCcc----------chHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe----ec
Q 015310 99 ADYVDFELKVAS----------NILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF----SV 163 (409)
Q Consensus 99 ~dyvDiEl~~~~----------~~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~----~~ 163 (409)
+|-||+=++... +.++.+..+ +..-.|+|+---. .+.+++....+-+.+.|||++|-.+ -.
T Consensus 125 AdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~----Lt~eei~~A~~ia~eaGADfVKTSTGf~~~G 200 (260)
T 3r12_A 125 ADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCY----LDTEEKIAACVISKLAGAHFVKTSTGFGTGG 200 (260)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG----CCHHHHHHHHHHHHHTTCSEEECCCSSSSCC
T ss_pred CCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCC----CCHHHHHHHHHHHHHhCcCEEEcCCCCCCCC
Confidence 999998666531 122333322 2234688876542 2457888888888899999999875 24
Q ss_pred CCHhHHHHHHHH
Q 015310 164 NDITEIARIFQL 175 (409)
Q Consensus 164 ~~~~D~~~ll~~ 175 (409)
.+.+|+..+.+.
T Consensus 201 AT~edV~lm~~~ 212 (260)
T 3r12_A 201 ATAEDVHLMKWI 212 (260)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 578888666554
No 347
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=89.59 E-value=0.29 Score=47.53 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=34.2
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCC-CeEEEEeCChHH
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRG-ARVVIFDIDFEQ 403 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G-~~i~v~nR~~~k 403 (409)
.++++++||.|+ |+.|++++..|.+.| .+|++++|+.++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~ 69 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSA 69 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCC
Confidence 356789999996 889999999999999 899999998654
No 348
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=89.57 E-value=0.18 Score=50.63 Aligned_cols=64 Identities=20% Similarity=0.142 Sum_probs=43.3
Q ss_pred EEEEcCcHHHHHHHHHHHH---HhcCcCCCCCCCCCCCCCCEEEEEec-hhHHHHHHHHHHh-CCCeEEEEeCChHH
Q 015310 332 LIGYNTDCEASITAIEDAI---KERGYKNGTASFGSPLAGRMFVLAGA-GGAGRALAFGAKS-RGARVVIFDIDFEQ 403 (409)
Q Consensus 332 l~G~NTD~~G~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~vlvlGa-GGaarai~~aL~~-~G~~i~v~nR~~~k 403 (409)
++..++.-.|....+++.. .+.+ .....+|++||.|+ +|.|+|++.+|++ .|++|.+++|+.++
T Consensus 30 ~~~~~a~p~g~~~~v~~qi~y~~~~~--------~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~ 98 (422)
T 3s8m_A 30 FICTTTHPLGCERNVLEQIAATRARG--------VRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPG 98 (422)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHTC--------CCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred eeeecCCchhHHHHHHHHHHHHhhcc--------ccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence 4555666666666654332 1111 01124789999986 6899999999999 99999999987554
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.56 E-value=0.27 Score=46.78 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=32.9
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
.|+++||+|+|+.|.+++..+...|++|+.+. +.+|.+.
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~ 180 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQAL 180 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHH
Confidence 57899999999999999998899999888887 6555443
No 350
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=89.56 E-value=0.25 Score=47.48 Aligned_cols=38 Identities=21% Similarity=0.465 Sum_probs=30.6
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCC-CeEEEEeCChHH
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRG-ARVVIFDIDFEQ 403 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G-~~i~v~nR~~~k 403 (409)
++++++||.|+ |+.|++++..|.+.| .+|+++.|+.++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~ 83 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG 83 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc
Confidence 45688999997 889999999999999 699999997544
No 351
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=89.53 E-value=0.72 Score=46.24 Aligned_cols=53 Identities=30% Similarity=0.448 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCe-EEEEeCC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDID 400 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~-i~v~nR~ 400 (409)
++|....++..+... +.+++|++|+|-|.|.+|..++.-|.++|++ |.|.+.+
T Consensus 201 g~Gv~~~~~~~~~~~---------g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~ 254 (424)
T 3k92_A 201 AQGVTICIEEAVKKK---------GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDAN 254 (424)
T ss_dssp HHHHHHHHHHHHHHT---------TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHc---------CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 467777777766532 2568899999999999999999999999996 5788876
No 352
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=89.50 E-value=0.33 Score=50.80 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=31.5
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
....|+|+|+|.+|.++|+.|++.|.+|+|+.|.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCC
Confidence 3568999999999999999999999999999986
No 353
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.50 E-value=0.32 Score=47.18 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=32.8
Q ss_pred CCEEEEEechhHHHHH-HHHH-HhCCCe-EEEEeCChH---HHHh
Q 015310 368 GRMFVLAGAGGAGRAL-AFGA-KSRGAR-VVIFDIDFE---QSLL 406 (409)
Q Consensus 368 ~~~vlvlGaGGaarai-~~aL-~~~G~~-i~v~nR~~~---ka~~ 406 (409)
+++|+|+|+|++|.++ +..+ ..+|++ |+.+.++.+ |.+.
T Consensus 173 ~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~ 217 (357)
T 2b5w_A 173 PSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI 217 (357)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence 3899999999999999 8777 778995 999999877 6543
No 354
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=89.48 E-value=0.19 Score=54.50 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=31.7
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~ 400 (409)
++.+|+|+|+||.|..++..|+..|+ +|+|++.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCC
Confidence 46789999999999999999999999 99999876
No 355
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=89.42 E-value=0.33 Score=46.20 Aligned_cols=39 Identities=26% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 368 GRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 368 ~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
|+ +||.|+ |++|.+++..++..|++|+.+.++.+|.+.+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~ 187 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL 187 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 45 999998 9999999999999999999999988876654
No 356
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=89.41 E-value=0.38 Score=46.06 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=32.5
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
++++++||.|+ |+.|++++..|.+.|.+|++++|+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFA 61 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45789999997 8899999999999999999999964
No 357
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.29 E-value=0.29 Score=47.41 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=31.5
Q ss_pred CEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 369 RMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 369 ~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
+++||.|+ |+.|++++..|.+.|.+|++++|+.++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 68999997 889999999999999999999997653
No 358
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=89.25 E-value=8.9 Score=36.00 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=87.5
Q ss_pred HHHhcCCCEEEEEecCCC----CCCC-----hh----HHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHc
Q 015310 31 QAKAEGADVVEIRLDCIN----NFQP-----GK----DLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (409)
Q Consensus 31 ~~~~~~aD~vElRlD~l~----~~~~-----~~----~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (409)
.+.+.|+|++ +-=|.+. ..++ .+ ..+.+.+..+.|+|+ .- -+-|.+..+.++-++--.+.++.
T Consensus 32 l~e~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD--~pfgsy~~s~~~a~~na~rl~ka 107 (275)
T 1o66_A 32 LMDDAGVEML-LVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIV-SD--LPFGAYQQSKEQAFAAAAELMAA 107 (275)
T ss_dssp HHHHTTCCEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEE-EE--CCTTSSSSCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEE-EE--CCCCCccCCHHHHHHHHHHHHHc
Confidence 3345799999 6555432 1111 11 223444556777776 22 23345566777766666777888
Q ss_pred CCcEEEEeccCccchHHHHHhccCCCcEEEE-------eccC---C---CCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015310 98 GADYVDFELKVASNILGKQYSSHQSGTRFIV-------SCNL---D---CETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (409)
Q Consensus 98 g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~-------S~H~---f---~~tp~~~~l~~~~~~~~~~gaDivKia~~~~ 164 (409)
|++.|=||-.. +....+..+...++.++. |.|. | -+|-..+++++....+++.|||.+=+=..|
T Consensus 108 Ga~aVklEdg~--e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp- 184 (275)
T 1o66_A 108 GAHMVKLEGGV--WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECVL- 184 (275)
T ss_dssp TCSEEEEECSG--GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEESCC-
T ss_pred CCcEEEECCcH--HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecCC-
Confidence 99999999763 223333322334555542 1121 1 233234778888888999999988776654
Q ss_pred CHhHHHHHHHHhccCCCCEEEEEcCcc
Q 015310 165 DITEIARIFQLLSHCQVPIIAYSVGER 191 (409)
Q Consensus 165 ~~~D~~~ll~~~~~~~~p~i~~~MG~~ 191 (409)
+++.+ +++...++|+|.|+-|+.
T Consensus 185 --~~~a~--~it~~l~iP~igIGaG~~ 207 (275)
T 1o66_A 185 --AELAK--KVTETVSCPTIGIGAGAD 207 (275)
T ss_dssp --HHHHH--HHHHHCSSCEEEESSCSC
T ss_pred --HHHHH--HHHHhCCCCEEEECCCCC
Confidence 23332 445556799999987764
No 359
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=89.15 E-value=5.7 Score=36.08 Aligned_cols=158 Identities=8% Similarity=-0.009 Sum_probs=92.3
Q ss_pred CCCCCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHH
Q 015310 6 ITKNTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85 (409)
Q Consensus 6 ~~~~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (409)
|.. ++++|+.+-.++.++.++.+++. ...+|++++=..+|....+ +.++.+++..+.++++=+... +.. +
T Consensus 9 m~~-~~~lilAlD~~~~~~a~~~v~~~-~~~v~~~Kvg~~lf~~~G~-~~v~~l~~~~g~~v~lD~Kl~------Dip-n 78 (228)
T 3m47_A 9 MDV-MNRLILAMDLMNRDDALRVTGEV-REYIDTVKIGYPLVLSEGM-DIIAEFRKRFGCRIIADFKVA------DIP-E 78 (228)
T ss_dssp CCC-GGGEEEECCCCSHHHHHHHHHTT-TTTCSEEEEEHHHHHHHCT-HHHHHHHHHHCCEEEEEEEEC------SCH-H
T ss_pred hhc-CCCeEEEeCCCCHHHHHHHHHHc-CCcccEEEEcHHHHHhcCH-HHHHHHHhcCCCeEEEEEeec------ccH-h
Confidence 444 78899999999999999888764 3338999998888754333 345666543467888777653 122 1
Q ss_pred HHHHHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEE--eccCCCCCCCHhH-HHHHHHHHHHcCCCEEEEEe
Q 015310 86 KRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIV--SCNLDCETPSEED-LGYLVSRMQATGADIIKLVF 161 (409)
Q Consensus 86 ~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~--S~H~f~~tp~~~~-l~~~~~~~~~~gaDivKia~ 161 (409)
--....+.+.+.|+|+|-+=.....+.++..+ ..++.+.++++ |.-+-.......+ .....+...+.|.|- +++
T Consensus 79 Tv~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~G--vV~ 156 (228)
T 3m47_A 79 TNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKN--YVG 156 (228)
T ss_dssp HHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCE--EEC
T ss_pred HHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcE--EEE
Confidence 21223456678899999997666555454444 22223445543 3221110001112 234445566788775 456
Q ss_pred ecCCHhHHHHHHHH
Q 015310 162 SVNDITEIARIFQL 175 (409)
Q Consensus 162 ~~~~~~D~~~ll~~ 175 (409)
.+..++++..+-+.
T Consensus 157 ~at~~~e~~~ir~~ 170 (228)
T 3m47_A 157 PSTRPERLSRLREI 170 (228)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHh
Confidence 65556666555444
No 360
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=89.01 E-value=0.3 Score=48.97 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.5
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.++|+.|++.|.+|+|+.+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 469999999999999999999999999999864
No 361
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.01 E-value=0.29 Score=52.02 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=31.9
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..++|+|||+|.+|.++++.|++.|.+|+|+.++.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35789999999999999999999999999999863
No 362
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=89.00 E-value=0.49 Score=47.80 Aligned_cols=37 Identities=41% Similarity=0.577 Sum_probs=33.0
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
.+++|++||-|+ ||.|++++..|.+.|++|++++|+.
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~ 247 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG 247 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467899999985 8899999999999999999999964
No 363
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=88.93 E-value=0.39 Score=49.55 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=30.5
Q ss_pred CCEEEEEechhHHHHHHHHHHh---CCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKS---RGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~---~G~~i~v~nR~ 400 (409)
.++|+|+|+|-+|.++|.+|++ .|.+|+|+.+.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 60 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAP 60 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCC
Confidence 4689999999999999999999 88999999985
No 364
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.93 E-value=3.5 Score=39.98 Aligned_cols=79 Identities=16% Similarity=0.252 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCCEEEEEecC--C-----CCC----CC-------------hhHHHHHHhcC--CCcEEEEeccC--CC
Q 015310 25 VLSNMYQAKAEGADVVEIRLDC--I-----NNF----QP-------------GKDLEIILTKK--PLPVLIVYRPK--WA 76 (409)
Q Consensus 25 ~~~~~~~~~~~~aD~vElRlD~--l-----~~~----~~-------------~~~l~~l~~~~--~~PiI~T~R~~--~e 76 (409)
+...++++.+.|.|.||+..-+ | ... .+ .+.++.+++.. +.||.+-++.. .+
T Consensus 154 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~ 233 (349)
T 3hgj_A 154 FVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGE 233 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCST
T ss_pred HHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 3444566677899999999865 1 111 11 12334445544 67888777653 23
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015310 77 GGLYEGDEHKRLEALHLAEDLGADYVDFEL 106 (409)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g~dyvDiEl 106 (409)
||. +.++..++.+.+.+.|+|||++-.
T Consensus 234 ~g~---~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 234 GGW---SLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp TSC---CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCC---CHHHHHHHHHHHHHcCCCEEEEec
Confidence 442 567788899999999999999853
No 365
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=88.91 E-value=0.31 Score=50.30 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=30.7
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|+|+|.+|.+++..|++.|++|+|+.|..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 469999999999999999999999999999864
No 366
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=88.86 E-value=0.36 Score=51.74 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=32.0
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..++++|||+|.+|.++++.|.+.|.+|+|+.+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35789999999999999999999999999999863
No 367
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.84 E-value=0.31 Score=46.27 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=32.1
Q ss_pred CCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 368 GRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 368 ~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
.+++.||| +|-+|.+++..|.+.|.+|++++|+.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 46899999 999999999999999999999999864
No 368
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=88.83 E-value=0.28 Score=48.38 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.9
Q ss_pred CEEEEEechhHHHHHHHHHHhC--CCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~--G~~i~v~nR~ 400 (409)
..|+|||+|-+|.++|+.|++. |.+|+|+.+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4699999999999999999999 9999999985
No 369
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=88.81 E-value=0.47 Score=45.31 Aligned_cols=150 Identities=17% Similarity=0.231 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCChhHHHHHH---h---cCCCcEEEEeccCCCCCCCCCCHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLEIIL---T---KKPLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~----~~~~~~l~~l~---~---~~~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (409)
+.+++++.+++..+.|||+|.+=...-.. .+..+++.++. + ..+.|+-+- ..+-+.
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSID--------------T~~~~V 115 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVD--------------TRKPEV 115 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEE--------------CSCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEE--------------CCCHHH
Confidence 34667888888889999999888754322 12233444332 1 125564321 133467
Q ss_pred HHHHHHcCCcEE-EEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCH---------------hHHHHHHHHHHHcCC
Q 015310 91 LHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSE---------------EDLGYLVSRMQATGA 154 (409)
Q Consensus 91 l~~~~~~g~dyv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~---------------~~l~~~~~~~~~~ga 154 (409)
.+++++.|+++| ||--...++.++ +. .+.+..+|+.+-. +++|.. +.+.+.++.+.+.|-
T Consensus 116 a~aAl~aGa~iINdVsg~~d~~m~~-v~--a~~~~~vVlmh~~-eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi 191 (294)
T 2dqw_A 116 AEEALKLGAHLLNDVTGLRDERMVA-LA--ARHGVAAVVMHMP-VPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGV 191 (294)
T ss_dssp HHHHHHHTCSEEECSSCSCCHHHHH-HH--HHHTCEEEEECCS-SSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCEEEECCCCCChHHHH-HH--HHhCCCEEEEcCC-CCCCccccccCccccHHHHHHHHHHHHHHHHHHCCC
Confidence 888999999887 554443333332 22 2457788887432 166652 346777888999997
Q ss_pred CEEEEEeec-----CCHhHHHHHHHHhcc---CCCCEEEEEcCcc
Q 015310 155 DIIKLVFSV-----NDITEIARIFQLLSH---CQVPIIAYSVGER 191 (409)
Q Consensus 155 DivKia~~~-----~~~~D~~~ll~~~~~---~~~p~i~~~MG~~ 191 (409)
+ +|..=| ++.++++.+++-+.+ .+.|+. ++.+..
T Consensus 192 ~--~IilDPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pvl-~G~Srk 233 (294)
T 2dqw_A 192 P--QVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVL-VGLSRK 233 (294)
T ss_dssp S--CEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBE-ECCTTC
T ss_pred C--cEEEcCCCCcccCHHHHHHHHHHHHHHhcCCCCEE-EEeccc
Confidence 7 887644 577888888776643 356643 344443
No 370
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.76 E-value=0.26 Score=47.15 Aligned_cols=37 Identities=27% Similarity=0.266 Sum_probs=32.1
Q ss_pred EEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 370 MFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 370 ~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
++||+|+ ||.|.+++..+...|++|+++.++.+|.+.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~ 190 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY 190 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 7999998 999999999999999999988888766543
No 371
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.76 E-value=0.26 Score=47.07 Aligned_cols=37 Identities=22% Similarity=0.169 Sum_probs=32.4
Q ss_pred EEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHHh
Q 015310 370 MFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSLL 406 (409)
Q Consensus 370 ~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~~ 406 (409)
+++|+|+ ||.|.+++..+...|++|+++.++.++.+.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~ 189 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY 189 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 7999998 999999999999999999999988766544
No 372
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=88.72 E-value=2.7 Score=41.18 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChh---HHHHHHhcCCCcEEEEeccCCCCCCCCCCHH
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGK---DLEIILTKKPLPVLIVYRPKWAGGLYEGDEH 85 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~---~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~ 85 (409)
+.|.+..|...-+..++...+. ...|..++. .+.++.+ .+.++++..++|+.+.+-.. +
T Consensus 45 ~~Pii~apM~~vt~~~lA~avA--~~GGlgii~------~~~s~e~~~~~I~~vk~~~~~pvga~ig~~--------~-- 106 (361)
T 3khj_A 45 KIPLISSAMDTVTEHLMAVGMA--RLGGIGIIH------KNMDMESQVNEVLKVKNSGGLRVGAAIGVN--------E-- 106 (361)
T ss_dssp SSSEEECSSTTTCSHHHHHHHH--HTTCEEEEC------SSSCHHHHHHHHHHHHHTTCCCCEEEECTT--------C--
T ss_pred CCCEEeecCCCCCcHHHHHHHH--HcCCCeEEe------cCCCHHHHHHHHHHHHhccCceEEEEeCCC--------H--
Confidence 4577878887766666654332 235666664 1223322 23334444578887776321 1
Q ss_pred HHHHHHHHHHHcCCcEEEEeccCcc--chHHHHHhccC-CCcEEEE-eccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 86 KRLEALHLAEDLGADYVDFELKVAS--NILGKQYSSHQ-SGTRFIV-SCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 86 ~~~~ll~~~~~~g~dyvDiEl~~~~--~~~~~l~~~~~-~~~kiI~-S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
.+.++.+++.|+|+|.|...... ...+.+...++ -+.++|+ ..+ | .+ ..+++.+.|+|.+|+.
T Consensus 107 --~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~----t--~e----~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 --IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVV----T--EE----ATKELIENGADGIKVG 173 (361)
T ss_dssp --HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEEC----S--HH----HHHHHHHTTCSEEEEC
T ss_pred --HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCC----C--HH----HHHHHHHcCcCEEEEe
Confidence 44566778889999988655432 22222222222 2788887 432 2 22 3466778899999984
No 373
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=88.69 E-value=2.8 Score=39.92 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=70.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHh-cCCCcEEEEeccCCCCCCCC-CCHHHHHHHHHHHHHcC
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT-KKPLPVLIVYRPKWAGGLYE-GDEHKRLEALHLAEDLG 98 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~-~~~~PiI~T~R~~~eGG~~~-~~~~~~~~ll~~~~~~g 98 (409)
.++++...+... ..+||+|=+-. . .+....+ ..+.|+|+.+=.... .++ .+++.-..-.+.+++.|
T Consensus 71 gl~~~~~~i~~l-~~g~dav~~~~--------G-~~~~~~~~~~~~~lil~l~~~t~--~~~~~~~~~l~~~ve~Av~~G 138 (295)
T 3glc_A 71 GLERIDINIAPL-FEHADVLMCTR--------G-ILRSVVPPATNRPVVLRASGANS--ILAELSNEAVALSMDDAVRLN 138 (295)
T ss_dssp TCTTHHHHTGGG-GGGCSEEEECH--------H-HHHHHSCGGGCCCEEEECEECCC--TTSCTTCCEECSCHHHHHHTT
T ss_pred chhhhHHHHHHh-hcCCCEEEECH--------h-HHhhhccccCCccEEEEEcCCCc--CCCCCccchhHHHHHHHHHCC
Confidence 345554445443 34688873221 1 1222222 237899987642211 011 11111111256788999
Q ss_pred CcEEEEeccCcc----chH---HHHH-hccCCCcEEEEeccCCCCCCCHhH-HHHHHHHHHHcCCCEEEEEeec
Q 015310 99 ADYVDFELKVAS----NIL---GKQY-SSHQSGTRFIVSCNLDCETPSEED-LGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 99 ~dyvDiEl~~~~----~~~---~~l~-~~~~~~~kiI~S~H~f~~tp~~~~-l~~~~~~~~~~gaDivKia~~~ 163 (409)
+|.|++=++... +.+ .+++ ..++.+.++|+-++.-......++ +....+.+.++|||++|.-.++
T Consensus 139 AdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~ 212 (295)
T 3glc_A 139 SCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE 212 (295)
T ss_dssp CSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred CCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 999999876543 122 2344 356678899886543111112234 4556677889999999998653
No 374
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=88.61 E-value=0.45 Score=47.48 Aligned_cols=36 Identities=39% Similarity=0.631 Sum_probs=32.8
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
+.+++++|+|+|..||.++.++.++|+++++++.+.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 468999999999999999999999999999998764
No 375
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=88.57 E-value=3 Score=40.00 Aligned_cols=86 Identities=16% Similarity=0.111 Sum_probs=58.8
Q ss_pred eEEEeeccCC-------HHHHHHHHHHHHhcCCCEEEEEecCCC-C----CCC----hhHHHHHHhcC---------CCc
Q 015310 12 MICAPLMAQS-------VEQVLSNMYQAKAEGADVVEIRLDCIN-N----FQP----GKDLEIILTKK---------PLP 66 (409)
Q Consensus 12 ~icv~l~~~~-------~~e~~~~~~~~~~~~aD~vElRlD~l~-~----~~~----~~~l~~l~~~~---------~~P 66 (409)
.+.+.|...+ .+++.+.++.+. .++|.||+-+-+=. + ... .+.++.+++.. ++|
T Consensus 135 ~~~v~i~~~~~~~i~~~~~~~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~P 213 (336)
T 1f76_A 135 VLGINIGKNKDTPVEQGKDDYLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVP 213 (336)
T ss_dssp EEEEEECCCTTSCGGGTHHHHHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred cEEEEecCCCCCcccccHHHHHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCc
Confidence 5678887766 788888777764 48999999763211 0 001 12334444433 799
Q ss_pred EEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 67 VLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 67 iI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
+++-++.. .++++..++.+.+.+.|+|+|++-
T Consensus 214 v~vKi~~~-------~~~~~~~~~a~~l~~~Gvd~i~vs 245 (336)
T 1f76_A 214 IAVKIAPD-------LSEEELIQVADSLVRHNIDGVIAT 245 (336)
T ss_dssp EEEECCSC-------CCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred eEEEecCC-------CCHHHHHHHHHHHHHcCCcEEEEe
Confidence 99877642 456777888889999999999985
No 376
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=88.49 E-value=0.49 Score=48.83 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..+.|+++.|+|.|-+|++++..|...|++|++++|+.+
T Consensus 138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~ 176 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVS 176 (529)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 457899999999999999999999999999999999753
No 377
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=88.46 E-value=1.1 Score=45.19 Aligned_cols=50 Identities=22% Similarity=0.237 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEE
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~ 397 (409)
++|.+..++..+... +.+++|++|+|-|.|-+|..++.-|.++|++|+.+
T Consensus 215 g~Gv~~~~~~~~~~~---------~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVav 264 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRH---------GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITA 264 (450)
T ss_dssp HHHHHHHHHHHHHHT---------TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred eeeHHHHHHHHHHHc---------CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEE
Confidence 567777777766532 25789999999999999999999999999975543
No 378
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=88.43 E-value=0.34 Score=49.50 Aligned_cols=33 Identities=33% Similarity=0.383 Sum_probs=30.0
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
-.|+|||+|.+|.+++..|++.|.+|+|+.+..
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 359999999999999999999999999998763
No 379
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=88.41 E-value=0.67 Score=44.19 Aligned_cols=88 Identities=15% Similarity=0.183 Sum_probs=62.5
Q ss_pred CeeEEEeeccCCHHHHHHHHHHHHhcCCC---EEEEEecC--CCC---C--CC---hhHHHHHHhcCCCcEEEEeccCCC
Q 015310 10 TTMICAPLMAQSVEQVLSNMYQAKAEGAD---VVEIRLDC--INN---F--QP---GKDLEIILTKKPLPVLIVYRPKWA 76 (409)
Q Consensus 10 ~~~icv~l~~~~~~e~~~~~~~~~~~~aD---~vElRlD~--l~~---~--~~---~~~l~~l~~~~~~PiI~T~R~~~e 76 (409)
.| +.+.|.+.+.+++.+.++.+.+.|+| .||+-+-+ ... + ++ .+.++.+++..++|+++-++..
T Consensus 94 ~p-~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~-- 170 (314)
T 2e6f_A 94 KP-LFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY-- 170 (314)
T ss_dssp CC-EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC--
T ss_pred Cc-EEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC--
Confidence 44 56889999999999999988888899 99996531 100 0 11 1234444444589999988753
Q ss_pred CCCCCCCHHHHHHHHHHHHHcC-CcEEEEe
Q 015310 77 GGLYEGDEHKRLEALHLAEDLG-ADYVDFE 105 (409)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g-~dyvDiE 105 (409)
.+.++..++.+.+.+.| +|+|++-
T Consensus 171 -----~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 -----FDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp -----CCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred -----CCHHHHHHHHHHHHhcCCceEEEEe
Confidence 25667777888889999 9999864
No 380
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=88.40 E-value=4.1 Score=39.28 Aligned_cols=80 Identities=18% Similarity=0.207 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecC--C------C--CC-CC-------------hhHHHHHHhcCCCcEEEEeccCC--C
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDC--I------N--NF-QP-------------GKDLEIILTKKPLPVLIVYRPKW--A 76 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~--l------~--~~-~~-------------~~~l~~l~~~~~~PiI~T~R~~~--e 76 (409)
+++.+.++++.+.|.|.||+-.-+ | + +. .+ .+.++.+++..+.|+.+-++... +
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 445566677778899999998742 1 1 10 11 12334455556888888777542 3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 77 GGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 77 GG~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
|| .+.++..++.+.+.+.|+|||+|-
T Consensus 224 ~g---~~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 224 KG---LDIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp TS---CCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CC---CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 33 256778889999999999999984
No 381
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=88.37 E-value=7.7 Score=35.03 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEec-C-C-CCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHc
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLD-C-I-NNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD-~-l-~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (409)
+..++ ++.+.+.|+|.+.++.. . + ..... +.++.+++..++|+++. ||-. +.+ + .+.+++.
T Consensus 33 d~~~~---a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~------ggI~--~~~-~---~~~~l~~ 96 (244)
T 1vzw_A 33 SPLEA---ALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELS------GGIR--DDD-T---LAAALAT 96 (244)
T ss_dssp CHHHH---HHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEE------SSCC--SHH-H---HHHHHHT
T ss_pred CHHHH---HHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEE------CCcC--CHH-H---HHHHHHc
Confidence 44444 45555689999999852 1 2 22222 45777777789999984 4432 232 2 4556678
Q ss_pred CCcEEEEeccC--ccchHHHHHhccCCCcEEE--Eec-------cCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCH
Q 015310 98 GADYVDFELKV--ASNILGKQYSSHQSGTRFI--VSC-------NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDI 166 (409)
Q Consensus 98 g~dyvDiEl~~--~~~~~~~l~~~~~~~~kiI--~S~-------H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~~ 166 (409)
|+|.|=+=... ..+.+.+++... +.+++ ++. |.+...-. +..+..+++.+.|+|.+=+-....+.
T Consensus 97 Gad~V~lg~~~l~~p~~~~~~~~~~--g~~~~~~l~~~~g~v~~~g~~~~~~--~~~e~~~~~~~~G~~~i~~~~~~~~~ 172 (244)
T 1vzw_A 97 GCTRVNLGTAALETPEWVAKVIAEH--GDKIAVGLDVRGTTLRGRGWTRDGG--DLYETLDRLNKEGCARYVVTDIAKDG 172 (244)
T ss_dssp TCSEEEECHHHHHCHHHHHHHHHHH--GGGEEEEEEEETTEECCSSSCCCCC--BHHHHHHHHHHTTCCCEEEEEC----
T ss_pred CCCEEEECchHhhCHHHHHHHHHHc--CCcEEEEEEccCCEEEEcCcccCCC--CHHHHHHHHHhCCCCEEEEeccCccc
Confidence 99987764432 222334443221 12333 333 32222111 34556677778899855332211111
Q ss_pred ----hHHHHHHHHhccCCCCEEEE
Q 015310 167 ----TEIARIFQLLSHCQVPIIAY 186 (409)
Q Consensus 167 ----~D~~~ll~~~~~~~~p~i~~ 186 (409)
-|...+-++....+.|+|+.
T Consensus 173 ~~~g~~~~~~~~i~~~~~ipvia~ 196 (244)
T 1vzw_A 173 TLQGPNLELLKNVCAATDRPVVAS 196 (244)
T ss_dssp ---CCCHHHHHHHHHTCSSCEEEE
T ss_pred ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 12233333334447788764
No 382
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=88.34 E-value=0.96 Score=46.96 Aligned_cols=59 Identities=20% Similarity=0.326 Sum_probs=42.8
Q ss_pred CCeEEEEcCcHHHHHH--HHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeC
Q 015310 329 DGKLIGYNTDCEASIT--AIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399 (409)
Q Consensus 329 ~g~l~G~NTD~~G~~~--~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR 399 (409)
+|+.+|-.+|-..... .|++.+. .......++|||+|.+|.+++..|++.|.+|+|+.+
T Consensus 78 ~g~~igG~~~l~~~~~~g~L~~~l~------------~~~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 78 RGKFIGDSQTVLKYYSNDELAGIVN------------ESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp TTEEEECHHHHHHHHHTTCHHHHHH------------CCSSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEeeehhhhhhhcCcchhhcc------------cccccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 6777776666444432 3444443 112346899999999999999999999999999986
No 383
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=88.34 E-value=0.33 Score=48.08 Aligned_cols=38 Identities=21% Similarity=0.092 Sum_probs=33.2
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~k 403 (409)
..+++|||.|| |+.|++++..|.+.|.+|+++.|+.++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 105 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNE 105 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSH
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCCh
Confidence 45679999997 889999999998888899999998763
No 384
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.30 E-value=4.3 Score=36.79 Aligned_cols=88 Identities=15% Similarity=0.232 Sum_probs=54.0
Q ss_pred eeEEEeecc----CCHHHHHHHHHHHHhcCCCEEEEEecCC--CCCCCh---hHHHHHHhcCCCcEEEEeccCCCCCCCC
Q 015310 11 TMICAPLMA----QSVEQVLSNMYQAKAEGADVVEIRLDCI--NNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYE 81 (409)
Q Consensus 11 ~~icv~l~~----~~~~e~~~~~~~~~~~~aD~vElRlD~l--~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~ 81 (409)
.++|..+.+ ...+....+++++.+.|+|.||+-+.+- ...+.. +.+..+++..+ |+++-+. -|.+.
T Consensus 54 v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi--~e~~~-- 128 (225)
T 1mzh_A 54 VKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVI--VETPY-- 128 (225)
T ss_dssp SEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEE--CCGGG--
T ss_pred CceeeEecCCCCccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEE--EeCCC--
Confidence 456654432 3345455667788889999999655532 111211 34555555556 8776652 11122
Q ss_pred CCHHHHHHHHHHHHHcCCcEEE
Q 015310 82 GDEHKRLEALHLAEDLGADYVD 103 (409)
Q Consensus 82 ~~~~~~~~ll~~~~~~g~dyvD 103 (409)
.++++-.++.+.+.+.|+|+|.
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~ 150 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIK 150 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEE
Confidence 3667788888899999999994
No 385
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.29 E-value=14 Score=33.28 Aligned_cols=148 Identities=17% Similarity=0.134 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG 98 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g 98 (409)
.+.+++.+-++++.+.|++.+=. .+ ..+....+.. +.++.-.. ..+-|-. ..+....-.+.+++.|
T Consensus 17 ~t~~~i~~l~~~a~~~g~~~v~v--------~~-~~v~~~~~~l~~v~v~~v~-~~P~g~~---~~~~k~~~~~~A~~~G 83 (225)
T 1mzh_A 17 LSEKEIEEFVLKSEELGIYAVCV--------NP-YHVKLASSIAKKVKVCCVI-GFPLGLN---KTSVKVKEAVEAVRDG 83 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE--------CG-GGHHHHHHHCSSSEEEEEE-STTTCCS---CHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCeEEEE--------CH-HHHHHHHHHhcCCceeeEe-cCCCCcc---chhhhHHHHHHHHHcC
Confidence 35677887788887888888631 11 1222222112 44544222 1222221 2334444457888999
Q ss_pred CcEEEEeccCcc-------c---hHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEee----c
Q 015310 99 ADYVDFELKVAS-------N---ILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFS----V 163 (409)
Q Consensus 99 ~dyvDiEl~~~~-------~---~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~----~ 163 (409)
+|.||+.++... . .++.++.. .+--.|+|+---+ .+.+++.+..+.+.+.|+|.+|..+- .
T Consensus 84 ad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~----l~~~~~~~~a~~a~eaGad~I~tstg~~~gg 159 (225)
T 1mzh_A 84 AQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPY----LNEEEIKKAVEICIEAGADFIKTSTGFAPRG 159 (225)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGG----CCHHHHHHHHHHHHHHTCSEEECCCSCSSSC
T ss_pred CCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCC----CCHHHHHHHHHHHHHhCCCEEEECCCCCCCC
Confidence 999998776532 1 22333322 1122445433222 23467888888899999999977651 1
Q ss_pred CCHhHHHHHHHHhccCCCCEEE
Q 015310 164 NDITEIARIFQLLSHCQVPIIA 185 (409)
Q Consensus 164 ~~~~D~~~ll~~~~~~~~p~i~ 185 (409)
.+.+++..+.+.. ..+.|+++
T Consensus 160 a~~~~i~~v~~~v-~~~ipVia 180 (225)
T 1mzh_A 160 TTLEEVRLIKSSA-KGRIKVKA 180 (225)
T ss_dssp CCHHHHHHHHHHH-TTSSEEEE
T ss_pred CCHHHHHHHHHHh-CCCCcEEE
Confidence 2445554444433 12456655
No 386
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=88.26 E-value=0.37 Score=49.38 Aligned_cols=34 Identities=26% Similarity=0.225 Sum_probs=31.4
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+++|||+|.+|.++++.|.+.|.+|+|+.++.
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999875
No 387
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.22 E-value=0.46 Score=47.38 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=35.9
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..+.||++.|+|-|-+|+.++..|..+|++|+.++|+..
T Consensus 141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 179 (404)
T 1sc6_A 141 FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENK 179 (404)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCch
Confidence 468899999999999999999999999999999999753
No 388
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=88.14 E-value=0.35 Score=50.07 Aligned_cols=33 Identities=33% Similarity=0.557 Sum_probs=30.4
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.+++..|++.|.+|+|+.+..
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 469999999999999999999999999998764
No 389
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=88.13 E-value=14 Score=35.09 Aligned_cols=124 Identities=14% Similarity=0.103 Sum_probs=75.7
Q ss_pred HHHHHHHHHhcCCCEEEEEecCCCCCCC--hhHHHHHH---hcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 25 VLSNMYQAKAEGADVVEIRLDCINNFQP--GKDLEIIL---TKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 25 ~~~~~~~~~~~~aD~vElRlD~l~~~~~--~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
+..+++++...|||.|=+++..-.+.+. .+++.+++ +...+|+|+-. ..|+....+++.-....+.+.++|+
T Consensus 127 l~~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~---~~G~~~~~d~e~i~~aariA~elGA 203 (295)
T 3glc_A 127 VALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVT---GVGKDMVRDQRYFSLATRIAAEMGA 203 (295)
T ss_dssp ECSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEE---CC----CCSHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEEC---CCCCccCCCHHHHHHHHHHHHHhCC
Confidence 3345667778999999999876543221 12233333 23479988753 2355544444433346678889999
Q ss_pred cEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEE
Q 015310 100 DYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIK 158 (409)
Q Consensus 100 dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivK 158 (409)
|||=..+. .+.++++... ..+.||+|=-. ++ +.++..+.++++.+.||+-+=
T Consensus 204 D~VKt~~t--~e~~~~vv~~--~~vPVv~~GG~--~~-~~~~~l~~v~~ai~aGA~Gv~ 255 (295)
T 3glc_A 204 QIIKTYYV--EKGFERIVAG--CPVPIVIAGGK--KL-PEREALEMCWQAIDQGASGVD 255 (295)
T ss_dssp SEEEEECC--TTTHHHHHHT--CSSCEEEECCS--CC-CHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEeCCC--HHHHHHHHHh--CCCcEEEEECC--CC-CHHHHHHHHHHHHHhCCeEEE
Confidence 99999864 2445666532 34678877432 22 357888888888888998443
No 390
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=88.01 E-value=0.37 Score=49.99 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=31.3
Q ss_pred CCCEEEEEechhHHHHHHHHHHhC--CCeEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~--G~~i~v~nR~~ 401 (409)
..++++|||+|.+|-++|+.|.+. |.+|+|+++..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 357899999999999999999998 67999999874
No 391
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=87.87 E-value=0.36 Score=50.22 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.2
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|+|+|.+|.++|+.|++.|.+|+|+.|..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 369999999999999999999999999999864
No 392
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=87.85 E-value=0.33 Score=50.31 Aligned_cols=33 Identities=33% Similarity=0.494 Sum_probs=30.3
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.+++..|++.|.+|+|+.+..
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999998764
No 393
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=87.80 E-value=0.86 Score=46.24 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeEE-EEeC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARVV-IFDI 399 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~-v~nR 399 (409)
++|.+..++..+.+. +.+++|++|+|-|.|-+|..++.-|.++|++|+ |.+.
T Consensus 232 g~Gv~~~~~~~l~~~---------G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~ 284 (470)
T 2bma_A 232 GYGLVYFVLEVLKSL---------NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDS 284 (470)
T ss_dssp HHHHHHHHHHHHHTT---------TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEET
T ss_pred hHHHHHHHHHHHHhc---------cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeC
Confidence 467777877776532 256889999999999999999999999999654 8875
No 394
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=87.77 E-value=0.31 Score=48.61 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=45.8
Q ss_pred EEEEcCcHHHHHHHHHHHH---HhcCcCCCCCCCCCCCCCCEEEEEec-hhHHHHHHHHHHh-CCCeEEEEeCChHH
Q 015310 332 LIGYNTDCEASITAIEDAI---KERGYKNGTASFGSPLAGRMFVLAGA-GGAGRALAFGAKS-RGARVVIFDIDFEQ 403 (409)
Q Consensus 332 l~G~NTD~~G~~~~l~~~l---~~~~~~~~~~~~~~~~~~~~vlvlGa-GGaarai~~aL~~-~G~~i~v~nR~~~k 403 (409)
++-.|+-=.|..+..++.. +..++ ....+|.+||.|+ +|.|+|++..|++ .|++|.+++|+.++
T Consensus 16 ~~~~~~hp~gc~~~v~~qi~~~~~~~~--------~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~ 84 (405)
T 3zu3_A 16 FICVTAHPTGCEANVKKQIDYVTTEGP--------IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPG 84 (405)
T ss_dssp TEECCCCHHHHHHHHHHHHHHHHHHCC--------CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred eeecCCCCHHHHHHHHHHHHHHHhcCC--------cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchh
Confidence 5666777788866655432 11111 2235789999986 6899999999999 99999999887543
No 395
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.77 E-value=0.33 Score=46.23 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=28.3
Q ss_pred CEEEEEechhHHHHHHHHHHh--CCCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKS--RGARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~--~G~~i~v~nR~ 400 (409)
..|+|||+|.+|.++|+.|++ .|.+|+|+.+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 469999999999999999974 58899999875
No 396
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=87.68 E-value=2.6 Score=38.79 Aligned_cols=104 Identities=9% Similarity=0.060 Sum_probs=67.1
Q ss_pred eEEEeeccCCHHHHHHHHHHHHhcCCCEEEEEe-cC--CCCCCC-hhHHHHHHhcC--CCcEEEEeccCCCCCCCCCCHH
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKAEGADVVEIRL-DC--INNFQP-GKDLEIILTKK--PLPVLIVYRPKWAGGLYEGDEH 85 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~~~aD~vElRl-D~--l~~~~~-~~~l~~l~~~~--~~PiI~T~R~~~eGG~~~~~~~ 85 (409)
+|+.+|..-|..++.++++.+.+.|+|++++++ |- .++.+- .+.++.+++.+ +.++++. +++
T Consensus 15 ~i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~DvhLMv~------------~p~ 82 (237)
T 3cu2_A 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFKDVHLMVR------------NQL 82 (237)
T ss_dssp CEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEEEEEEECS------------CHH
T ss_pred eEEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCCCeEEEEE------------CHH
Confidence 599999999998898889988888999999998 41 122221 13455555433 2333321 223
Q ss_pred HHHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCC---------CcEEEEec
Q 015310 86 KRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQS---------GTRFIVSC 130 (409)
Q Consensus 86 ~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~---------~~kiI~S~ 130 (409)
. +++.+.+.|+|+|-+=....+...+.+...++. +.++.++.
T Consensus 83 ~---~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l 133 (237)
T 3cu2_A 83 E---VAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACL 133 (237)
T ss_dssp H---HHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEE
T ss_pred H---HHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEE
Confidence 3 455677889999777666554433333345566 77888887
No 397
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.67 E-value=0.65 Score=46.51 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+.||++.|+|.|.+|++++..|..+|++|+.++|+.
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~ 189 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSD 189 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcc
Confidence 56889999999999999999999999999999999874
No 398
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=87.62 E-value=0.3 Score=48.57 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=29.8
Q ss_pred CCEEEEEechhHHHHHHHHHHhCC-CeEEEEeC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRG-ARVVIFDI 399 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G-~~i~v~nR 399 (409)
...|+|||+|-+|.++|+.|++.| .+|+|+.+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 357999999999999999999999 79999998
No 399
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=87.60 E-value=16 Score=32.99 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=65.2
Q ss_pred CCeeEEEeeccCCH--HHHHHHHHHHHhcCCCEEEEEecCCCCCCC---------------------hhHHHHHHhcCCC
Q 015310 9 NTTMICAPLMAQSV--EQVLSNMYQAKAEGADVVEIRLDCINNFQP---------------------GKDLEIILTKKPL 65 (409)
Q Consensus 9 ~~~~icv~l~~~~~--~e~~~~~~~~~~~~aD~vElRlD~l~~~~~---------------------~~~l~~l~~~~~~ 65 (409)
+++.++.+|+.-+. ++..+.++.+.+. +|.+|+-+-+-++..+ .+.++++++..++
T Consensus 3 ~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~ 81 (248)
T 1geq_A 3 KDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSST 81 (248)
T ss_dssp CTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCC
T ss_pred CCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCC
Confidence 56678888887776 6888888888777 9999987543222111 1344556666688
Q ss_pred cEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEec
Q 015310 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSC 130 (409)
Q Consensus 66 PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~ 130 (409)
|+++-.+... .+... ..+.++.+++.|+|+|=+--...++ .++++ ..++.+.+++...
T Consensus 82 pv~~~~~~~~---~~~~~---~~~~~~~~~~~Gad~v~~~~~~~~~-~~~~~~~~~~~g~~~~~~i 140 (248)
T 1geq_A 82 PIVLMTYYNP---IYRAG---VRNFLAEAKASGVDGILVVDLPVFH-AKEFTEIAREEGIKTVFLA 140 (248)
T ss_dssp CEEEEECHHH---HHHHC---HHHHHHHHHHHTCCEEEETTCCGGG-HHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEeccch---hhhcC---HHHHHHHHHHCCCCEEEECCCChhh-HHHHHHHHHHhCCCeEEEE
Confidence 9876542100 00000 1345667788899988874322222 22332 2233456666544
No 400
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=87.57 E-value=0.44 Score=48.20 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=30.0
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
..++|||+|.+|.++|..|++.|.+|+|+.+.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 57 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKR 57 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 56999999999999999999999999999975
No 401
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=87.46 E-value=4.2 Score=38.24 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=60.9
Q ss_pred HHHHHhcCCCEEEEE--ecC----CCC---CCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 29 MYQAKAEGADVVEIR--LDC----INN---FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 29 ~~~~~~~~aD~vElR--lD~----l~~---~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
++.+.+.|+|++++| ++. +.. ....+.++.+++..++|+++..+.. + .+.++.+.+.|+
T Consensus 34 a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~--------~----~~~~~~~~~aGa 101 (297)
T 2zbt_A 34 AVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIG--------H----FVEAMILEAIGV 101 (297)
T ss_dssp HHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETT--------C----HHHHHHHHHTTC
T ss_pred HHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccC--------C----HHHHHHHHHCCC
Confidence 344456799999986 221 111 1123456777777799999876532 2 234556677899
Q ss_pred cEEEEeccC-ccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 100 DYVDFELKV-ASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 100 dyvDiEl~~-~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
|+||.-... ..++++.+... ..+..+++..|+ | ++. .++.+.|+|++.+-
T Consensus 102 d~v~~~~~~~~~~~~~~~~~~-~~~i~l~~~v~~----~--~~~----~~a~~~Gad~I~v~ 152 (297)
T 2zbt_A 102 DFIDESEVLTPADEEHHIDKW-KFKVPFVCGARN----L--GEA----LRRIAEGAAMIRTK 152 (297)
T ss_dssp SEEEEETTSCCSCSSCCCCGG-GCSSCEEEEESS----H--HHH----HHHHHTTCSEEEEC
T ss_pred CEEeeeCCCChHHHHHHHHHh-CCCceEEeecCC----H--HHH----HHHHHcCCCEEEEc
Confidence 999764422 12222222211 124555555553 2 332 33578899997654
No 402
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=87.45 E-value=2.8 Score=38.71 Aligned_cols=46 Identities=11% Similarity=0.187 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC--hhHHHHHHhcCCCcEEE
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP--GKDLEIILTKKPLPVLI 69 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~--~~~l~~l~~~~~~PiI~ 69 (409)
+.++.++.+ .+.|.|.||++.+.+...++ .++++++.+..++.+..
T Consensus 18 ~~~~~l~~~---~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 18 DYKYYIEKV---AKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CHHHHHHHH---HHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHH---HHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 456665544 56799999999876544332 23455555667887765
No 403
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=87.44 E-value=5.1 Score=36.72 Aligned_cols=147 Identities=14% Similarity=0.069 Sum_probs=87.7
Q ss_pred cCCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcC
Q 015310 19 AQSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLG 98 (409)
Q Consensus 19 ~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g 98 (409)
..+.+++.+-++++.+.+++.|=+.--+ ..... .++..++. |.|+=.-+.|-. +-+.+..=.+.+++.|
T Consensus 25 ~~t~~~i~~lc~eA~~~~~~aVcV~p~~------v~~a~-~l~~~~v~-v~tVigFP~G~~---~~~~K~~E~~~Ai~~G 93 (231)
T 3ndo_A 25 EATPSDVTALVDEAADLGVFAVCVSPPL------VSVAA-GVAPSGLA-IAAVAGFPSGKH---VPGIKATEAELAVAAG 93 (231)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEECGGG------HHHHH-HHCCTTCE-EEEEESTTTCCS---CHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEECHHH------HHHHH-HhcCCCCe-EEEEecCCCCCC---cHHHHHHHHHHHHHcC
Confidence 3457888888888888888877332111 11223 33333333 334433333332 3355555567899999
Q ss_pred CcEEEEeccCcc----------chHHHHHhc-cCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEe-----e
Q 015310 99 ADYVDFELKVAS----------NILGKQYSS-HQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVF-----S 162 (409)
Q Consensus 99 ~dyvDiEl~~~~----------~~~~~l~~~-~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~-----~ 162 (409)
+|-||+=++... +.++.+..+ +....|+|+--.......+.+++....+-+.+.|||++|-.+ -
T Consensus 94 AdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~~~ 173 (231)
T 3ndo_A 94 ATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSG 173 (231)
T ss_dssp CSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCCTTC
T ss_pred CCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCCCC
Confidence 999998766531 122333322 333468888665431112457788888888899999999875 2
Q ss_pred cCCHhHHHHHHHHh
Q 015310 163 VNDITEIARIFQLL 176 (409)
Q Consensus 163 ~~~~~D~~~ll~~~ 176 (409)
..+.+|+..+.+..
T Consensus 174 gAt~edv~lm~~~v 187 (231)
T 3ndo_A 174 GASVQAVEIMARTV 187 (231)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 34678886666553
No 404
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=87.25 E-value=0.45 Score=44.43 Aligned_cols=35 Identities=20% Similarity=0.426 Sum_probs=32.2
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++++++|+|+|..|--++..|.++|.+|+|+.|.
T Consensus 150 ~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 150 FRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred cCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 35789999999999999999999999999999875
No 405
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=87.24 E-value=8.7 Score=35.14 Aligned_cols=146 Identities=18% Similarity=0.092 Sum_probs=72.9
Q ss_pred HHHHHHHHhcCCCEEEEEecCCCC----CCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 015310 26 LSNMYQAKAEGADVVEIRLDCINN----FQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADY 101 (409)
Q Consensus 26 ~~~~~~~~~~~aD~vElRlD~l~~----~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dy 101 (409)
...++.+.+.|+|.++++ |.-.. ....+.++.+++..++|+|+- ||..+. ++ ++.+++.|+|.
T Consensus 33 ~~~a~~~~~~Ga~~i~v~-d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~------ggi~~~--~~----i~~~~~~Gad~ 99 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLT-SIDRDGTKSGYDTEMIRFVRPLTTLPIIAS------GGAGKM--EH----FLEAFLAGADK 99 (266)
T ss_dssp HHHHHHHHHHTCSEEEEE-ETTTSSCSSCCCHHHHHHHGGGCCSCEEEE------SCCCST--HH----HHHHHHHTCSE
T ss_pred HHHHHHHHHCCCCEEEEE-ecCcccCCCcccHHHHHHHHHhcCCCEEEE------CCCCCH--HH----HHHHHHcCCcH
Confidence 334455566799999995 53321 112356677777779999983 453322 22 23445568887
Q ss_pred EEEeccC-----ccchHHHHHhccCCC---cEEEEeccCC--C-----CCCCH-----hHHHHHHHHHHHcCCCEEEEEe
Q 015310 102 VDFELKV-----ASNILGKQYSSHQSG---TRFIVSCNLD--C-----ETPSE-----EDLGYLVSRMQATGADIIKLVF 161 (409)
Q Consensus 102 vDiEl~~-----~~~~~~~l~~~~~~~---~kiI~S~H~f--~-----~tp~~-----~~l~~~~~~~~~~gaDivKia~ 161 (409)
|=+=-.. ..+.++++.. ..+ .+++++.... + .+-.| ....+..+++.+.|++.+=+..
T Consensus 100 v~lg~~~~~~~~~~~~~~~~~~--~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~ 177 (266)
T 2w6r_A 100 ALAASVFHFREIDMRELKEYLK--KHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTS 177 (266)
T ss_dssp EECCCCC------CHHHHHHCC------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEE
T ss_pred hhhhHHHHhCCCCHHHHHHHHH--HcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEe
Confidence 6553222 2233344431 122 2444443310 0 01111 1345666777788998764432
Q ss_pred ecCC----HhHHHHHHHHhccCCCCEEEE
Q 015310 162 SVND----ITEIARIFQLLSHCQVPIIAY 186 (409)
Q Consensus 162 ~~~~----~~D~~~ll~~~~~~~~p~i~~ 186 (409)
..++ .-|...+-++....+.|+|+.
T Consensus 178 ~~~~g~~~g~~~~~i~~l~~~~~ipvia~ 206 (266)
T 2w6r_A 178 IDRDGTKSGYDTEMIRFVRPLTTLPIIAS 206 (266)
T ss_dssp TTTTTTCSCCCHHHHHHHGGGCCSCEEEE
T ss_pred ecCCCCcCCCCHHHHHHHHHHcCCCEEEe
Confidence 2111 113333334444457888764
No 406
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=87.22 E-value=34 Score=36.47 Aligned_cols=209 Identities=12% Similarity=0.080 Sum_probs=120.2
Q ss_pred CHHHHHHHHHHHHhcCCCE--EEEE----ec----CCCCCCChhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADV--VEIR----LD----CINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLE 89 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~--vElR----lD----~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (409)
+.++.++-++.+.+.|+|+ ||.= +| ++ ..++.+.+..+++.. +.++-...|..+-=|.....+....+
T Consensus 123 ~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~-~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~ 201 (718)
T 3bg3_A 123 RTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFL-YECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFK 201 (718)
T ss_dssp CHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTS-CCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccC-CCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHH
Confidence 4566666666666666666 9973 33 33 335556677766543 55666667764444555566666677
Q ss_pred HHHHHHHcCCcEEEEeccCcc-chHHHHH-hccCCCcEEE--Eecc-CCCCC--C--CHhHHHHHHHHHHHcCCCEEEEE
Q 015310 90 ALHLAEDLGADYVDFELKVAS-NILGKQY-SSHQSGTRFI--VSCN-LDCET--P--SEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 90 ll~~~~~~g~dyvDiEl~~~~-~~~~~l~-~~~~~~~kiI--~S~H-~f~~t--p--~~~~l~~~~~~~~~~gaDivKia 160 (409)
.++.+.+.|++.|-|=..... +.++..+ .+++.+..+. +||- ||... + +.+.+.++++++.+.|||++-|+
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~ 281 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIK 281 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 889999999998877554432 1122222 3344454443 4543 12221 1 45789999999999999999888
Q ss_pred eecC--CHhHHHHHHHHhcc-C-CCCEEEEE---cCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhhh
Q 015310 161 FSVN--DITEIARIFQLLSH-C-QVPIIAYS---VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231 (409)
Q Consensus 161 ~~~~--~~~D~~~ll~~~~~-~-~~p~i~~~---MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~~ 231 (409)
=|.- ++.++.++.+.+.+ . +.|+ .+- .--++..+=+..-.-|....=+++.. +-..||.+++++...++.
T Consensus 282 DT~G~~~P~~v~~lV~~lk~~~p~~~I-~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~~L~~ 359 (718)
T 3bg3_A 282 DMAGLLKPTACTMLVSSLRDRFPDLPL-HIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRG 359 (718)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHSTTCCE-EEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CcCCCcCHHHHHHHHHHHHHhCCCCeE-EEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHHHHHh
Confidence 5544 57788777776543 2 3443 321 22223333333333343333333322 234677777777666554
No 407
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=87.22 E-value=3.4 Score=38.46 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCC-CCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKW-AGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~-eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
+.+++.+.++++.+.|+|.|=+-.. .+.... ..+.++|+.+=+.. -.|.. .++ ....-.+.+++.|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~~---------~v~~~~-~~~~~liv~~~~~~~~~g~~-~~~-~~~~~ve~Ai~~Ga 106 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQRG---------IAEKYY-DGSVPLILKLNGKTTLYNGE-PVS-VANCSVEEAVSLGA 106 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECHH---------HHHHHC-CSSSCEEEECEECCTTCCSS-CCC-EESSCHHHHHHTTC
T ss_pred chhhHHHHHHHHHhhCCCEEEECHH---------HHHHhh-cCCCcEEEEEeCCCCcCCCC-ccc-hHHHHHHHHHHCCC
Confidence 5677777778888889998833211 233322 34678777653221 11221 122 33344678899999
Q ss_pred cEEEEeccCcc----ch---HHHHH-hccCCCcEEEEeccC----CCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 015310 100 DYVDFELKVAS----NI---LGKQY-SSHQSGTRFIVSCNL----DCETPSEEDLGYLVSRMQATGADIIKLVFSVNDIT 167 (409)
Q Consensus 100 dyvDiEl~~~~----~~---~~~l~-~~~~~~~kiI~S~H~----f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~~~ 167 (409)
+.||+=.+... +. .+++. ..++.+.++|+-.|. +..-.+.+++....+.+.+.|||++|.-+ |.+.+
T Consensus 107 ~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~-~~~~e 185 (263)
T 1w8s_A 107 SAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKY-TGDPK 185 (263)
T ss_dssp SEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC-CSSHH
T ss_pred CEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC-CCCHH
Confidence 99998553321 11 22333 234457777776442 10001345666667888899999999995 55666
Q ss_pred HHHHHHHHhccCCC-CEEEEE
Q 015310 168 EIARIFQLLSHCQV-PIIAYS 187 (409)
Q Consensus 168 D~~~ll~~~~~~~~-p~i~~~ 187 (409)
++..+.+.. +. |+++.+
T Consensus 186 ~~~~~~~~~---~~~pV~asG 203 (263)
T 1w8s_A 186 TFSWAVKVA---GKVPVLMSG 203 (263)
T ss_dssp HHHHHHHHT---TTSCEEEEC
T ss_pred HHHHHHHhC---CCCeEEEEe
Confidence 665554433 44 766554
No 408
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=87.19 E-value=7.8 Score=36.30 Aligned_cols=160 Identities=15% Similarity=0.190 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCC----CCCCChhHHHHHH---hc-CCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCI----NNFQPGKDLEIIL---TK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l----~~~~~~~~l~~l~---~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (409)
+.+++++.+++..+.|||+|.+=--.- ...+..+++.++. +. ....+.+.+=| .+-+..+
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT------------~~~~Va~ 95 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDT------------FRSEVAE 95 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEEC------------SCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEEC------------CCHHHHH
Confidence 457788889999999999997743221 1122344555543 11 12233344432 3456788
Q ss_pred HHHHcCCcEEE-Ee-ccCccchHHHHHhccCCCcEEEEeccCCCCCCCHh--------HHHHHHHHHHHcCCCEEEEEee
Q 015310 93 LAEDLGADYVD-FE-LKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEE--------DLGYLVSRMQATGADIIKLVFS 162 (409)
Q Consensus 93 ~~~~~g~dyvD-iE-l~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~--------~l~~~~~~~~~~gaDivKia~~ 162 (409)
++++.|+++|- |- ...+++.++ +. .+.+..+|+-| ..++|..+ ++.+.++.+.+.|.+-=+|..=
T Consensus 96 ~al~aGa~iINDVs~g~~d~~m~~-~v--a~~~~~~vlMH--~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilD 170 (270)
T 4hb7_A 96 ACLKLGVDMINDQWAGLYDHRMFQ-IV--AKYDAEIILMH--NGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLD 170 (270)
T ss_dssp HHHHHTCCEEEETTTTSSCTHHHH-HH--HHTTCEEEEEC--CCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHhccceeccccccccchhHHH-HH--HHcCCCeEEec--cccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEe
Confidence 99999999874 43 233344433 32 23578888874 24566432 2455667788888543356654
Q ss_pred -----cCCHhHHHHHHHHhcc---CCCCEEEEEcCccchhhhhh
Q 015310 163 -----VNDITEIARIFQLLSH---CQVPIIAYSVGERGLVSQLL 198 (409)
Q Consensus 163 -----~~~~~D~~~ll~~~~~---~~~p~i~~~MG~~G~~SRi~ 198 (409)
.++.++++.|++-+.. .+.|+ .++......+..++
T Consensus 171 PGiGFgKt~~~N~~ll~~l~~~~~lg~Pv-LvG~SRKsfig~~l 213 (270)
T 4hb7_A 171 PGIGFAKTRNEEAEVMARLDELVATEYPV-LLATSRKRFTKEMM 213 (270)
T ss_dssp CCTTSSCCHHHHHHHHTCHHHHHTTCSCB-EECCTTSHHHHHHH
T ss_pred CCCCcccccccHHHHHhhHHHHhcCCCCE-EEEecHHHHHHHHh
Confidence 5789999998866543 36774 55666666555555
No 409
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=87.18 E-value=0.48 Score=45.73 Aligned_cols=34 Identities=21% Similarity=0.115 Sum_probs=30.7
Q ss_pred CEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 369 RMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 369 ~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
+++||.|+ |+.|++++..|.+.|.+|++++|+.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 59 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS 59 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence 68999995 88999999999999999999999754
No 410
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=87.17 E-value=0.56 Score=49.69 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=30.7
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.++|.+|++.|++|.|+.++.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 479999999999999999999999999999874
No 411
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=87.17 E-value=4.3 Score=37.73 Aligned_cols=56 Identities=18% Similarity=0.103 Sum_probs=32.6
Q ss_pred eeEEEeec-c---CCHHHHHHHHHHHHhcCCCEEEEEecCCC----CCCChhHHHHHHhcCCCcEEE
Q 015310 11 TMICAPLM-A---QSVEQVLSNMYQAKAEGADVVEIRLDCIN----NFQPGKDLEIILTKKPLPVLI 69 (409)
Q Consensus 11 ~~icv~l~-~---~~~~e~~~~~~~~~~~~aD~vElRlD~l~----~~~~~~~l~~l~~~~~~PiI~ 69 (409)
.+|.+... . .+.++.+ +.+.+.|.|.||++.+.+. .....+++++.++..++.+..
T Consensus 23 ~klgi~~~~~~~~~~~~~~l---~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 23 CPITISSYTLGTEVSFPKRV---KVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp CCEEECGGGGTTTSCHHHHH---HHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCceeechhcCCCCCHHHHH---HHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 44565432 2 3455555 4555679999999986321 112234566666667776654
No 412
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=87.11 E-value=0.46 Score=44.54 Aligned_cols=35 Identities=11% Similarity=0.133 Sum_probs=32.0
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
..+|+++|+|+|-+|--.+..|.++|.+|+|+.|.
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecc
Confidence 45789999999999999999999999999999875
No 413
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=87.07 E-value=8.6 Score=37.30 Aligned_cols=86 Identities=20% Similarity=0.171 Sum_probs=56.4
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCCC-EEEEEecCCC-----CC-CChhHHHHH----HhcCCCcEEEEeccCCCC
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGAD-VVEIRLDCIN-----NF-QPGKDLEII----LTKKPLPVLIVYRPKWAG 77 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~aD-~vElRlD~l~-----~~-~~~~~l~~l----~~~~~~PiI~T~R~~~eG 77 (409)
..| +.+.|.+.+.+|..+-++.+.+.++| .+|+=+=+=. .+ .+.+.+.++ ++..++|+++-+|+.
T Consensus 128 ~~p-vivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~--- 203 (345)
T 3oix_A 128 SKN-HFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY--- 203 (345)
T ss_dssp CCC-CEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC---
T ss_pred CCC-EEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC---
Confidence 345 56899999999999988887666766 9999875310 11 111234433 344589999999863
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEE
Q 015310 78 GLYEGDEHKRLEALHLAEDLGADYV 102 (409)
Q Consensus 78 G~~~~~~~~~~~ll~~~~~~g~dyv 102 (409)
.+.++..++++.+-..++++|
T Consensus 204 ----~~~~~~a~~~~~aga~~i~~i 224 (345)
T 3oix_A 204 ----FDIVHFDQAAAIFNXYPLTFV 224 (345)
T ss_dssp ----CCHHHHHHHHHHHTTSCCSEE
T ss_pred ----CCHHHHHHHHHHhCCCceEEE
Confidence 256666666666665556543
No 414
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=87.06 E-value=0.52 Score=47.66 Aligned_cols=32 Identities=28% Similarity=0.243 Sum_probs=30.1
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
..++|||+|.+|.++|..|++.|.+|+|+.++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 47999999999999999999999999999984
No 415
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=87.04 E-value=4.1 Score=39.39 Aligned_cols=87 Identities=20% Similarity=0.276 Sum_probs=55.0
Q ss_pred eeccCCHHHH----HHHHHHHHhcCCCEEEEEecC-------CCC---C-CC-------------hhHHHHHHhcCCCcE
Q 015310 16 PLMAQSVEQV----LSNMYQAKAEGADVVEIRLDC-------INN---F-QP-------------GKDLEIILTKKPLPV 67 (409)
Q Consensus 16 ~l~~~~~~e~----~~~~~~~~~~~aD~vElRlD~-------l~~---~-~~-------------~~~l~~l~~~~~~Pi 67 (409)
.++..+++++ .+.++++.+.|.|.||+-.-+ |.. . .+ .+.++.+++..+.|+
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv 212 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPL 212 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCce
Confidence 3444444443 444556677899999998764 111 1 11 133344555568888
Q ss_pred EEEeccCC--CCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 68 LIVYRPKW--AGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 68 I~T~R~~~--eGG~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
.+-++... +||. +.++..++.+.+.+.|+|||+|-
T Consensus 213 ~vRls~~~~~~~g~---~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 213 FVRISASDYHPDGL---TAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp EEEEESCCCSTTSC---CGGGHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeccccccCCCC---CHHHHHHHHHHHHHcCCCEEEEe
Confidence 87777531 2342 45678889999999999999984
No 416
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=87.03 E-value=0.45 Score=46.63 Aligned_cols=41 Identities=24% Similarity=0.221 Sum_probs=35.4
Q ss_pred CCCEEEEE--echhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLA--GAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvl--GaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
.|.++||+ |+|++|.+++..+...|++|+++.++.+|.+.+
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~ 212 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL 212 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 36789999 789999999998999999999999998886654
No 417
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=86.92 E-value=0.35 Score=50.21 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=30.7
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
+.++|+|+|.+|.++|+.|++.|.+|+|+.|..
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 579999999999999999999999999999873
No 418
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=86.90 E-value=0.5 Score=48.33 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=33.4
Q ss_pred CCC-CEEEEEechhHHHHHHHHHHhC------CCeEEEEeCChHH
Q 015310 366 LAG-RMFVLAGAGGAGRALAFGAKSR------GARVVIFDIDFEQ 403 (409)
Q Consensus 366 ~~~-~~vlvlGaGGaarai~~aL~~~------G~~i~v~nR~~~k 403 (409)
++| +++.|||.|-+|.+++..|.+. |.+|+|.+|+.++
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sk 95 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSK 95 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCS
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchh
Confidence 678 9999999999999999999998 8888888876443
No 419
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.88 E-value=0.66 Score=49.93 Aligned_cols=38 Identities=26% Similarity=0.243 Sum_probs=34.6
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
=++|.|||||-+|+.|++.++..|++|++++++++..+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~ 353 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLD 353 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhh
Confidence 36899999999999999999999999999999977654
No 420
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=86.69 E-value=2.2 Score=39.58 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHh--cCCCcEEEEeccCCCCCCCC-CCHHHHHHHHHHHHHcC
Q 015310 22 VEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILT--KKPLPVLIVYRPKWAGGLYE-GDEHKRLEALHLAEDLG 98 (409)
Q Consensus 22 ~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~--~~~~PiI~T~R~~~eGG~~~-~~~~~~~~ll~~~~~~g 98 (409)
.+++...++.+.+.|++.++. +. ..+....+ ..+.|+++.+.....- ++ ...+...+..+.+++.|
T Consensus 44 ~~~~~~~~~~~~~~g~~~i~~--~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~--~~d~~~~~~~~~v~~a~~~G 112 (273)
T 2qjg_A 44 LIDIRKTVNDVAEGGANAVLL--HK-------GIVRHGHRGYGKDVGLIIHLSGGTAI--SPNPLKKVIVTTVEEAIRMG 112 (273)
T ss_dssp SSSHHHHHHHHHHHTCSEEEE--CH-------HHHHSCCCSSSCCCEEEEECEECCTT--SSSTTCCEECSCHHHHHHTT
T ss_pred hhhHHHHHHHHHhcCCCEEEe--CH-------HHHHHHHHhhcCCCCEEEEEcCCCcC--CCCcccchHHHHHHHHHHcC
Confidence 345555566667789999974 11 11211111 1367888887642210 10 11111233456788899
Q ss_pred CcEEEEeccCcc-------chHHHHH-hccCCCcEEEEec-----cCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC
Q 015310 99 ADYVDFELKVAS-------NILGKQY-SSHQSGTRFIVSC-----NLDCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165 (409)
Q Consensus 99 ~dyvDiEl~~~~-------~~~~~l~-~~~~~~~kiI~S~-----H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~ 165 (409)
++.||+-+.... +..+++. ..++.+.++|+-. |- ..--+.+++.+..+.+.+.|+|++|+-. +.
T Consensus 113 a~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l-~~~~~~~~~~~~a~~a~~~Gad~i~~~~-~~- 189 (273)
T 2qjg_A 113 ADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHI-QNERDPELVAHAARLGAELGADIVKTSY-TG- 189 (273)
T ss_dssp CSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTC-SCTTCHHHHHHHHHHHHHTTCSEEEECC-CS-
T ss_pred CCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCccc-CCCCCHhHHHHHHHHHHHcCCCEEEECC-CC-
Confidence 999987653321 1233344 2344567776632 21 1011234555666888899999999873 33
Q ss_pred HhHHHHHHHHhccCCCCEEEE
Q 015310 166 ITEIARIFQLLSHCQVPIIAY 186 (409)
Q Consensus 166 ~~D~~~ll~~~~~~~~p~i~~ 186 (409)
|...+-++....+.|+++.
T Consensus 190 --~~~~l~~i~~~~~ipvva~ 208 (273)
T 2qjg_A 190 --DIDSFRDVVKGCPAPVVVA 208 (273)
T ss_dssp --SHHHHHHHHHHCSSCEEEE
T ss_pred --CHHHHHHHHHhCCCCEEEE
Confidence 3333333333446787764
No 421
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=86.67 E-value=0.42 Score=53.16 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=32.3
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~ 400 (409)
+++.+|+|+|+||.|..++..|...|+ +|+|++.+
T Consensus 25 L~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D 60 (1015)
T 3cmm_A 25 MQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPE 60 (1015)
T ss_dssp HTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCS
T ss_pred HhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCC
Confidence 457899999999999999999999999 99999865
No 422
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=86.52 E-value=0.56 Score=47.20 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=29.8
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.+|+|||+|-+|.++++.|.+.|.+|+|+.++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCC
Confidence 58999999999999999999999999999765
No 423
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=86.48 E-value=0.54 Score=47.36 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=31.1
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
...++|||+|.+|.+++..|++.|.+|+|+.|+.
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 3579999999999999999999999999999874
No 424
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=86.45 E-value=0.7 Score=46.71 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=34.4
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhC---CCeEEEEeCChHHH
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSR---GARVVIFDIDFEQS 404 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~---G~~i~v~nR~~~ka 404 (409)
..++++|+|.|+ |+.|+.++..|.+. |.+|+++.|+.+..
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~ 113 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE 113 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence 356899999996 77999999999998 88999999986543
No 425
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=86.35 E-value=0.67 Score=49.03 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.+++++|||+|-+|.++++.|.+.|.+|+|+.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~ 139 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 139 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecC
Confidence 4679999999999999999999999999999875
No 426
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=86.30 E-value=0.92 Score=44.18 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
.|++++|.| +||.|.+++..+...|++|+++.+ .++.+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~ 221 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE 221 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH
Confidence 578999999 699999999999999998877774 34433
No 427
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=86.28 E-value=0.63 Score=49.17 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=30.6
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.++|.+|++.|++|.|+.++.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 469999999999999999999999999999874
No 428
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=86.21 E-value=0.62 Score=49.26 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.8
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.++|.+|++.|.+|.|+.+..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 479999999999999999999999999999874
No 429
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=86.20 E-value=0.49 Score=47.44 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=31.4
Q ss_pred CCCCEEEEEec-hhHHHH--HHHHHHhCCCeEEEEeCChH
Q 015310 366 LAGRMFVLAGA-GGAGRA--LAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaara--i~~aL~~~G~~i~v~nR~~~ 402 (409)
..+|++||.|+ +|.|++ ++.++.+.|++|++++|+.+
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~ 97 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETG 97 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcc
Confidence 56899999995 789999 88888888999999998643
No 430
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.10 E-value=13 Score=35.49 Aligned_cols=213 Identities=11% Similarity=0.087 Sum_probs=112.1
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHHhcCC-CEEEEEecCCCCCCC---hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCH
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAKAEGA-DVVEIRLDCINNFQP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDE 84 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~~~~a-D~vElRlD~l~~~~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~ 84 (409)
..|.|+.|..+-+..++...+. ..|+ ++++.+. .++ .+.+..+++..+.|+.+.+-.. ..
T Consensus 12 ~~Pii~apM~g~s~~~la~av~---~aG~lG~i~~~~-----~~~~~~~~~i~~i~~~~~~p~gvnl~~~------~~-- 75 (332)
T 2z6i_A 12 DYPIFQGGMAWVADGDLAGAVS---KAGGLGIIGGGN-----APKEVVKANIDKIKSLTDKPFGVNIMLL------SP-- 75 (332)
T ss_dssp SSSEEECCCTTTCCHHHHHHHH---HHTSBEEEECTT-----CCHHHHHHHHHHHHHHCCSCEEEEECTT------ST--
T ss_pred CCCEEeCCCCCCCcHHHHHHHH---hCCCcEEeCCCC-----CCHHHHHHHHHHHHHhcCCCEEEEecCC------CC--
Confidence 4578888888766566655443 3464 7887541 122 1233444444567887665421 11
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec-
Q 015310 85 HKRLEALHLAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV- 163 (409)
Q Consensus 85 ~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~- 163 (409)
.+.+.++.+.+.|+|.|.+=...+.+.++.+.. .+.+++.+.+. .+ ..+.+.+.|+|.+.+-...
T Consensus 76 -~~~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~---~g~~v~~~v~~------~~----~a~~~~~~GaD~i~v~g~~~ 141 (332)
T 2z6i_A 76 -FVEDIVDLVIEEGVKVVTTGAGNPSKYMERFHE---AGIIVIPVVPS------VA----LAKRMEKIGADAVIAEGMEA 141 (332)
T ss_dssp -THHHHHHHHHHTTCSEEEECSSCGGGTHHHHHH---TTCEEEEEESS------HH----HHHHHHHTTCSCEEEECTTS
T ss_pred -CHHHHHHHHHHCCCCEEEECCCChHHHHHHHHH---cCCeEEEEeCC------HH----HHHHHHHcCCCEEEEECCCC
Confidence 244566778889999999877777666666543 47888877632 22 3456677899999985321
Q ss_pred ----CCHhHHHHHHH-HhccCCCCEEEEE-cCccchhhhhhcCCCCCccccccCCCC--CCCCCCCHHHHHhhhhhcccc
Q 015310 164 ----NDITEIARIFQ-LLSHCQVPIIAYS-VGERGLVSQLLSPKFNGALVYGSLKGT--PVLGLPTVESLRQTYKVEHIN 235 (409)
Q Consensus 164 ----~~~~D~~~ll~-~~~~~~~p~i~~~-MG~~G~~SRi~~~~~Gs~ltf~~l~~~--sAPGQ~~~~~l~~~~~~~~i~ 235 (409)
-...+. .++. +....++|+|+-+ .+..-.+-.++. .|.... .++.. ..|.-...+.+++.+.-.. .
T Consensus 142 GG~~g~~~~~-~ll~~i~~~~~iPViaaGGI~~~~~~~~al~--~GAdgV--~vGs~~l~~~e~~~~~~~k~~~~~~~-~ 215 (332)
T 2z6i_A 142 GGHIGKLTTM-TLVRQVATAISIPVIAAGGIADGEGAAAGFM--LGAEAV--QVGTRFVVAKESNAHPNYKEKILKAR-D 215 (332)
T ss_dssp SEECCSSCHH-HHHHHHHHHCSSCEEEESSCCSHHHHHHHHH--TTCSEE--EECHHHHTBTTCCSCHHHHHHHHHCC-T
T ss_pred CCCCCCccHH-HHHHHHHHhcCCCEEEECCCCCHHHHHHHHH--cCCCEE--EecHHHhcCccccccHHHHHHHHhCC-C
Confidence 112233 3333 3334478987642 111112334333 243221 22221 2222223345555442211 1
Q ss_pred ccceEE-eeeccCCcccCCHHhH
Q 015310 236 ADTKVF-GLISKPVGHSKGPILH 257 (409)
Q Consensus 236 ~~~~~~-~viG~pi~hS~SP~ih 257 (409)
.++... ...|.|+.-.+.|.+.
T Consensus 216 ~d~~~~~~~~g~~~r~l~n~~~~ 238 (332)
T 2z6i_A 216 IDTTISAQHFGHAVRAIKNQLTR 238 (332)
T ss_dssp TCEEEESGGGTCCEEEECSHHHH
T ss_pred cCEEEECCcCCCcEEEEeCHHHH
Confidence 122222 2457887777777753
No 431
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=86.04 E-value=1.3 Score=42.21 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCC----CCChhHHHHHH---h---cCCCcEEEEeccCCCCCCCCCCHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINN----FQPGKDLEIIL---T---KKPLPVLIVYRPKWAGGLYEGDEHKRLEA 90 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~----~~~~~~l~~l~---~---~~~~PiI~T~R~~~eGG~~~~~~~~~~~l 90 (409)
+.+++++.+++..+.|||+|.+=...-.. .+..+++.++. + ..+.||-+- ..+-+.
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSID--------------T~~~~V 109 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSID--------------TYKPAV 109 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEE--------------CCCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEE--------------CCCHHH
Confidence 46788888999999999999888865432 23334454432 1 115554321 133467
Q ss_pred HHHHHHcCCcEE-EEeccCccchHHHHHhccCCCcEEEEeccCCCCCCC----------------HhHHHHHHHHHHHcC
Q 015310 91 LHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPS----------------EEDLGYLVSRMQATG 153 (409)
Q Consensus 91 l~~~~~~g~dyv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~----------------~~~l~~~~~~~~~~g 153 (409)
.+++++.|+++| ||-....++.++ + +.+.+..+|+.+- .++|. .+.+.+.++.+.+.|
T Consensus 110 a~aAl~aGa~iINdVsg~~d~~m~~-~--~a~~~~~vVlmh~--~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~G 184 (294)
T 2y5s_A 110 MRAALAAGADLINDIWGFRQPGAID-A--VRDGNSGLCAMHM--LGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAG 184 (294)
T ss_dssp HHHHHHHTCSEEEETTTTCSTTHHH-H--HSSSSCEEEEECC--CEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEECCCCCchHHHH-H--HHHhCCCEEEECC--CCCCccccccCCccccHHHHHHHHHHHHHHHHHHcC
Confidence 888999998887 665444333332 2 3457888888753 33332 234677788888888
Q ss_pred CCEEEEEe-----ecCCH-hHHHHHHHHhccC
Q 015310 154 ADIIKLVF-----SVNDI-TEIARIFQLLSHC 179 (409)
Q Consensus 154 aDivKia~-----~~~~~-~D~~~ll~~~~~~ 179 (409)
-+-=+|.. ..++. ++++.+++-+.+.
T Consensus 185 i~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l 216 (294)
T 2y5s_A 185 VAAERICVDPGFGFGKAVVDDNYALLAALPDT 216 (294)
T ss_dssp CCGGGEEEECCTTSSSCTTHHHHHHHHTGGGG
T ss_pred CChhhEEEeCCCcccccchHHHHHHHHHHHHH
Confidence 54113443 45677 8888888876543
No 432
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=85.96 E-value=0.47 Score=48.56 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=30.2
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++|||||+|-+|-.++..|.+.+++|+|++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCC
Confidence 458999999999999999998888999999986
No 433
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=85.92 E-value=0.69 Score=48.93 Aligned_cols=33 Identities=39% Similarity=0.657 Sum_probs=31.0
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++++|||+|.+|-+++..|.+.|.+|+|+++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 405 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAH 405 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 578999999999999999999999999999986
No 434
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=85.89 E-value=6.8 Score=35.31 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEec--CCC-CCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHc
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLD--CIN-NFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD--~l~-~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (409)
+..++. +.+.+.|+|.+.++.. .+. .... +.++.+++..++|+++. ||.. +++ + .+.+++.
T Consensus 32 d~~~~a---~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~------ggi~--~~~-~---~~~~l~~ 95 (244)
T 2y88_A 32 SAVDAA---LGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELS------GGIR--DDE-S---LAAALAT 95 (244)
T ss_dssp EHHHHH---HHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEE------SSCC--SHH-H---HHHHHHT
T ss_pred CHHHHH---HHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEE------CCCC--CHH-H---HHHHHHc
Confidence 444444 4555679999999852 122 2222 56777777789999983 4442 233 2 4556678
Q ss_pred CCcEEEEeccCc--cchHHHHHhccCCCcEEEEecc-----------CCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015310 98 GADYVDFELKVA--SNILGKQYSSHQSGTRFIVSCN-----------LDCETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (409)
Q Consensus 98 g~dyvDiEl~~~--~~~~~~l~~~~~~~~kiI~S~H-----------~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~ 164 (409)
|+|.|-+=.... .+.+.+++........+=++.+ .+.... ++..+.++++.+.|+|.+= ++..
T Consensus 96 Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~--~~~~e~~~~~~~~G~~~i~--~~~~ 171 (244)
T 2y88_A 96 GCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDG--GDLWDVLERLDSEGCSRFV--VTDI 171 (244)
T ss_dssp TCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEE--EEHHHHHHHHHHTTCCCEE--EEET
T ss_pred CCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCC--CCHHHHHHHHHhCCCCEEE--EEec
Confidence 999987754322 2234444321111111222322 211111 1456677778888988653 3332
Q ss_pred CH------hHHHHHHHHhccCCCCEEEE
Q 015310 165 DI------TEIARIFQLLSHCQVPIIAY 186 (409)
Q Consensus 165 ~~------~D~~~ll~~~~~~~~p~i~~ 186 (409)
+. -|...+-++....+.|+|+.
T Consensus 172 ~~~~~~~g~~~~~~~~l~~~~~ipvia~ 199 (244)
T 2y88_A 172 TKDGTLGGPNLDLLAGVADRTDAPVIAS 199 (244)
T ss_dssp TTTTTTSCCCHHHHHHHHTTCSSCEEEE
T ss_pred CCccccCCCCHHHHHHHHHhCCCCEEEE
Confidence 22 13333334444446777664
No 435
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=85.88 E-value=0.62 Score=47.60 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=33.1
Q ss_pred CCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHH
Q 015310 368 GRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQS 404 (409)
Q Consensus 368 ~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka 404 (409)
+++|||.|+ |..|++++..|.+.|.+|+++.|+.+++
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~ 184 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP 184 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc
Confidence 679999995 8899999999999999999999987654
No 436
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=85.85 E-value=0.64 Score=46.19 Aligned_cols=33 Identities=42% Similarity=0.544 Sum_probs=30.2
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
...++|||+|-+|.++++.|.+.|.+|+|+.++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~ 61 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRR 61 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEecc
Confidence 457999999999999999999999999999875
No 437
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=85.82 E-value=25 Score=33.69 Aligned_cols=161 Identities=16% Similarity=0.134 Sum_probs=101.0
Q ss_pred CCCeeEEEeeccCCH--------------HHHHHHHHHHH-hcCCCEEEEEecCCCCC----CCh---hHHHHHHhcCCC
Q 015310 8 KNTTMICAPLMAQSV--------------EQVLSNMYQAK-AEGADVVEIRLDCINNF----QPG---KDLEIILTKKPL 65 (409)
Q Consensus 8 ~~~~~icv~l~~~~~--------------~e~~~~~~~~~-~~~aD~vElRlD~l~~~----~~~---~~l~~l~~~~~~ 65 (409)
.|+|.|.+-|..... +++.+.+++.. +.|||+|-++...-... +.. +.++.+++..++
T Consensus 51 ~n~p~iam~V~D~~pe~~~~v~~~~~~~~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v 130 (323)
T 4djd_D 51 VNRPVIGMEVQDIVPDWPDVLKDPFTDVINEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV 130 (323)
T ss_dssp CSCCEEEEEEESSCCSCCHHHHGGGTTTTTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCeEEEEEecCCccchhhHHHHHHHHHHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc
Confidence 478888887766332 34555566666 78999999998765432 111 223344455689
Q ss_pred cEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCc----EEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhH
Q 015310 66 PVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGAD----YVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEED 141 (409)
Q Consensus 66 PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~d----yvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~ 141 (409)
||.+- | .+.+..+-+.++++++.|++ .=|+.....++... + +.+.+..+|+.+- .+.+.
T Consensus 131 PlsID-------g--~~~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~-l--aa~~g~~vVlmh~-----~d~~~ 193 (323)
T 4djd_D 131 PLVVV-------G--CGDVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTA-A--CMVHKHNIIARSP-----LDINI 193 (323)
T ss_dssp CEEEE-------C--CSCHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHH-H--HHHHTCEEEEECS-----SCHHH
T ss_pred eEEEE-------C--CCCCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHH-H--HHHhCCeEEEEcc-----chHHH
Confidence 98764 1 24567888999999998854 34665543333322 2 2346778888641 13466
Q ss_pred HHHHHHHHHHcCCCEEEEEe------ecCCHhHHHHHHHHhcc--------CCCCEEE
Q 015310 142 LGYLVSRMQATGADIIKLVF------SVNDITEIARIFQLLSH--------CQVPIIA 185 (409)
Q Consensus 142 l~~~~~~~~~~gaDivKia~------~~~~~~D~~~ll~~~~~--------~~~p~i~ 185 (409)
+.++++.+.++|-+-=+|.. ..++.++++.+++.++. .+.|++.
T Consensus 194 ~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~ 251 (323)
T 4djd_D 194 CKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVIC 251 (323)
T ss_dssp HHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEE
T ss_pred HHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEE
Confidence 78888889998863233443 23567888887766543 3778765
No 438
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=85.79 E-value=14 Score=34.73 Aligned_cols=194 Identities=14% Similarity=0.107 Sum_probs=104.2
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC------CChhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF------QPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~------~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (409)
+.++.++-++.+.+.|.|.||.=- +... .+.+++...++.. +.++.... . . .+-++.
T Consensus 25 ~~e~k~~i~~~L~~~Gv~~IE~g~--~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~---------~----~~~i~~ 88 (298)
T 2cw6_A 25 STPVKIKLIDMLSEAGLSVIETTS--FVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-P---------N----LKGFEA 88 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEECCEE--CCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-C---------S----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEECC--CcCcccccccCCHHHHHHHHhhCCCCEEEEEc-C---------C----HHhHHH
Confidence 456677777777778999999863 2111 1112222211111 33322221 1 1 123678
Q ss_pred HHHcCCcEEEEeccCccc---------------hHHHHH-hccCCCcEEE--Eecc----CCCCCCCHhHHHHHHHHHHH
Q 015310 94 AEDLGADYVDFELKVASN---------------ILGKQY-SSHQSGTRFI--VSCN----LDCETPSEEDLGYLVSRMQA 151 (409)
Q Consensus 94 ~~~~g~dyvDiEl~~~~~---------------~~~~l~-~~~~~~~kiI--~S~H----~f~~tp~~~~l~~~~~~~~~ 151 (409)
+++.|++.|-|=....+. ...+.+ .+++.+.++- +|+. +... -+.+++.++++.+.+
T Consensus 89 a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~ 167 (298)
T 2cw6_A 89 AVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGK-ISPAKVAEVTKKFYS 167 (298)
T ss_dssp HHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBS-CCHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCC-CCHHHHHHHHHHHHH
Confidence 888999999986554432 112222 3455666664 3322 1112 246789999999999
Q ss_pred cCCCEEEEEeecC--CHhHHHHHHHHhccC--CCCEEEEEcCccch--hhhhhcCCCCCcccccc---CCC-CCC---CC
Q 015310 152 TGADIIKLVFSVN--DITEIARIFQLLSHC--QVPIIAYSVGERGL--VSQLLSPKFNGALVYGS---LKG-TPV---LG 218 (409)
Q Consensus 152 ~gaDivKia~~~~--~~~D~~~ll~~~~~~--~~p~i~~~MG~~G~--~SRi~~~~~Gs~ltf~~---l~~-~sA---PG 218 (409)
+|+|.+.++=+.- ++.++.++++.+.+. +.|+-.=+=-..|. ..-+.+-..|....-++ +++ |.| .|
T Consensus 168 ~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aG 247 (298)
T 2cw6_A 168 MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASG 247 (298)
T ss_dssp TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCC
T ss_pred cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcC
Confidence 9999999984433 588888887776432 23433222112222 11122222233222222 233 334 47
Q ss_pred CCCHHHHHhhhhh
Q 015310 219 LPTVESLRQTYKV 231 (409)
Q Consensus 219 Q~~~~~l~~~~~~ 231 (409)
+.+.+++...++.
T Consensus 248 N~~~E~lv~~l~~ 260 (298)
T 2cw6_A 248 NLATEDLVYMLEG 260 (298)
T ss_dssp BCBHHHHHHHHHH
T ss_pred ChhHHHHHHHHHh
Confidence 9999998887754
No 439
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=85.78 E-value=0.92 Score=45.81 Aligned_cols=53 Identities=19% Similarity=0.272 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCeE-EEEeCC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGARV-VIFDID 400 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~i-~v~nR~ 400 (409)
++|....++..+.+. +.+++|++|+|-|.|-+|..++..|.++|++| .|.+.+
T Consensus 219 g~Gv~~~~~~~~~~~---------g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~ 272 (456)
T 3r3j_A 219 GYGVVYFAENVLKDL---------NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSN 272 (456)
T ss_dssp HHHHHHHHHHHHHTT---------TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSS
T ss_pred chHHHHHHHHHHHHc---------CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 578888888776532 35789999999999999999999999999965 577753
No 440
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=85.73 E-value=0.8 Score=44.53 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=33.6
Q ss_pred CCCEEEEEe-chhHHHHHHHHHHhC-CCeEEEEeCChHHHHhh
Q 015310 367 AGRMFVLAG-AGGAGRALAFGAKSR-GARVVIFDIDFEQSLLL 407 (409)
Q Consensus 367 ~~~~vlvlG-aGGaarai~~aL~~~-G~~i~v~nR~~~ka~~l 407 (409)
.|+++||+| +|++|.+++..+..+ |++|+++.++.+|.+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~ 213 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV 213 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 578999999 899999888777764 67999999998776543
No 441
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.71 E-value=0.55 Score=52.40 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=31.1
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCC-eEEEEeCC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGA-RVVIFDID 400 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~-~i~v~nR~ 400 (409)
+++++|||+|.+|.++|+.|.+.|. +|+|+.|.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 6789999999999999999999999 79999986
No 442
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=85.71 E-value=22 Score=32.80 Aligned_cols=90 Identities=19% Similarity=0.230 Sum_probs=53.4
Q ss_pred CCeeEEEeecc--CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---------------------hHHHHHHhc-CC
Q 015310 9 NTTMICAPLMA--QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPG---------------------KDLEIILTK-KP 64 (409)
Q Consensus 9 ~~~~icv~l~~--~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---------------------~~l~~l~~~-~~ 64 (409)
+++.++..|+. ++.++..+.++.+.+.|+|++|+=+-+.++..+. +.++.+++. .+
T Consensus 15 ~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~ 94 (268)
T 1qop_A 15 REGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT 94 (268)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 45556555554 4558888888888889999999977554332111 235556666 68
Q ss_pred CcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Q 015310 65 LPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDF 104 (409)
Q Consensus 65 ~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDi 104 (409)
+|+++-.... -.+...- .+.++.+.+.|+|.|=+
T Consensus 95 ~Pv~lm~y~n---~v~~~g~---~~~~~~~~~aGadgii~ 128 (268)
T 1qop_A 95 IPIGLLMYAN---LVFNNGI---DAFYARCEQVGVDSVLV 128 (268)
T ss_dssp SCEEEEECHH---HHHTTCH---HHHHHHHHHHTCCEEEE
T ss_pred CCEEEEEccc---HHHHhhH---HHHHHHHHHcCCCEEEE
Confidence 9987632110 0000111 34566777788885544
No 443
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=85.69 E-value=0.66 Score=44.70 Aligned_cols=39 Identities=31% Similarity=0.288 Sum_probs=32.8
Q ss_pred CEEEEE-echhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 369 RMFVLA-GAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 369 ~~vlvl-GaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
++++|. |+||.|.+++..+...|++|+++.|+.+|.+.+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 205 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL 205 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 567666 789999999999999999999999988876543
No 444
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=85.63 E-value=0.74 Score=47.52 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
....+|+|+|||+|-+|--++.+|.+.|.+|+++.|++.
T Consensus 174 ~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 174 KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346789999999999999999999999999999999754
No 445
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=85.48 E-value=13 Score=34.14 Aligned_cols=43 Identities=23% Similarity=0.246 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcE
Q 015310 24 QVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPV 67 (409)
Q Consensus 24 e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~Pi 67 (409)
++...++.+.+.|.|.||+..+...+ ...++++++++..++.+
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~l~~~gl~~ 84 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDPSI-VDWNEVKILSEELNLPI 84 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCGGG-SCHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCcch-hhHHHHHHHHHHcCCeE
Confidence 34444555566799999999874322 22345666666667776
No 446
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=85.48 E-value=11 Score=35.12 Aligned_cols=118 Identities=11% Similarity=0.101 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHH---h-cCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHH
Q 015310 20 QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIIL---T-KKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAE 95 (409)
Q Consensus 20 ~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~---~-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~ 95 (409)
.+.+++++.+++..+.|||+|-+-...- ..+..+++.++. + ..+.|+.+= | .+-+.+++++
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~-~v~~~ee~~rvv~~i~~~~~~pisID--T------------~~~~v~~aAl 86 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPA-VQDKVSAMEWLVEVTQEVSNLTLCLD--S------------TNIKAIEAGL 86 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC-----CHHHHHHHHHHHHHTTCCSEEEEE--C------------SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCC-CCChHHHHHHHHHHHHHhCCCeEEEe--C------------CCHHHHHHHH
Confidence 4678888888888899999999887432 223344555543 2 236665432 1 2345778888
Q ss_pred Hc--CCcEE-EEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCH-----hHHHHHHHHHHHcCC
Q 015310 96 DL--GADYV-DFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSE-----EDLGYLVSRMQATGA 154 (409)
Q Consensus 96 ~~--g~dyv-DiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~-----~~l~~~~~~~~~~ga 154 (409)
+. |+++| ||-... +-++++. ...+.+..+|+.+-+-+++|.. +.+.++++.+.+.|-
T Consensus 87 ~a~~Ga~iINdvs~~~--d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi 152 (262)
T 1f6y_A 87 KKCKNRAMINSTNAER--EKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGL 152 (262)
T ss_dssp HHCSSCEEEEEECSCH--HHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTC
T ss_pred hhCCCCCEEEECCCCc--ccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 88 88876 575442 2111222 2234677888886555667752 223445555555553
No 447
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=85.44 E-value=0.66 Score=47.99 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
.++.+|+|+|||+|-+|--++.+|++.|.+|+++.|++
T Consensus 187 ~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 187 VDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred cccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 34678999999999999999999999999999999985
No 448
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.36 E-value=2.7 Score=41.17 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecC-------CCCC----CC-------------hhHHHHHHhcCC-CcEEEEeccC--C
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDC-------INNF----QP-------------GKDLEIILTKKP-LPVLIVYRPK--W 75 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~-------l~~~----~~-------------~~~l~~l~~~~~-~PiI~T~R~~--~ 75 (409)
+++.+.++++.+.|+|.||+-.-+ +... .+ .+.++.+++... .|+.+-++.. .
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 345555666678899999997642 1110 01 123445555442 2877766654 2
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015310 76 AGG-LYEGDEHKRLEALHLAEDLGADYVDFEL 106 (409)
Q Consensus 76 eGG-~~~~~~~~~~~ll~~~~~~g~dyvDiEl 106 (409)
+|. ....+.++..++.+.+.+.|+|||++-.
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 220 1122456788889999999999999854
No 449
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=85.35 E-value=1.7 Score=51.13 Aligned_cols=42 Identities=26% Similarity=0.356 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEec-hh-HHHHHHHHHHhCCCeEEEEe-CChHHHH
Q 015310 364 SPLAGRMFVLAGA-GG-AGRALAFGAKSRGARVVIFD-IDFEQSL 405 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GG-aarai~~aL~~~G~~i~v~n-R~~~ka~ 405 (409)
..++||++||-|+ || .|++++..|.+.|++|++++ |+.++.+
T Consensus 648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~ 692 (1878)
T 2uv9_A 648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVT 692 (1878)
T ss_dssp BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHH
Confidence 4578999999996 56 99999999999999998884 7665543
No 450
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.31 E-value=0.71 Score=47.74 Aligned_cols=38 Identities=16% Similarity=0.241 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
.++.+|+|+|||+|-+|--++.+|++.|.+|+|+.|++
T Consensus 181 ~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 181 VDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred cccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 34578999999999999999999999988999999985
No 451
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=85.27 E-value=18 Score=33.76 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=66.7
Q ss_pred HHHHHHhcCCCEEEEEec--CCCCCCChhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEe
Q 015310 28 NMYQAKAEGADVVEIRLD--CINNFQPGKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFE 105 (409)
Q Consensus 28 ~~~~~~~~~aD~vElRlD--~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiE 105 (409)
.++.+...||+++=+--| +|.+ ..+.+..+++..++|+| |. + |-.++. + +..+...|+|.|=+-
T Consensus 84 ~A~~y~~~GA~~IsVltd~~~f~G--s~~~L~~ir~~v~lPVl---~K--d---fi~d~~---q-i~ea~~~GAD~VlLi 149 (272)
T 3tsm_A 84 LAKAYEEGGAACLSVLTDTPSFQG--APEFLTAARQACSLPAL---RK--D---FLFDPY---Q-VYEARSWGADCILII 149 (272)
T ss_dssp HHHHHHHTTCSEEEEECCSTTTCC--CHHHHHHHHHTSSSCEE---EE--S---CCCSTH---H-HHHHHHTTCSEEEEE
T ss_pred HHHHHHHCCCCEEEEeccccccCC--CHHHHHHHHHhcCCCEE---EC--C---ccCCHH---H-HHHHHHcCCCEEEEc
Confidence 344555679999954333 3332 23567778777899998 22 2 222322 2 345678899997776
Q ss_pred ccCc-cchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEE
Q 015310 106 LKVA-SNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIK 158 (409)
Q Consensus 106 l~~~-~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivK 158 (409)
...- .+.+++++ .++.-|..+++..|+ .+| ++++.++|+|++=
T Consensus 150 ~a~L~~~~l~~l~~~a~~lGl~~lvevh~------~eE----l~~A~~~ga~iIG 194 (272)
T 3tsm_A 150 MASVDDDLAKELEDTAFALGMDALIEVHD------EAE----MERALKLSSRLLG 194 (272)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCEEEEEECS------HHH----HHHHTTSCCSEEE
T ss_pred ccccCHHHHHHHHHHHHHcCCeEEEEeCC------HHH----HHHHHhcCCCEEE
Confidence 5443 23455555 456678899999996 234 3556678999883
No 452
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=85.19 E-value=10 Score=36.31 Aligned_cols=196 Identities=12% Similarity=0.044 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEE-eccCCCCCCCCCCHHHHHHHHHHHHHcCCcE
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIV-YRPKWAGGLYEGDEHKRLEALHLAEDLGADY 101 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T-~R~~~eGG~~~~~~~~~~~ll~~~~~~g~dy 101 (409)
++.++-++.+.+.|.|.||.=.....+ .+.+.+..+++...-+-|.. .|.. .+.-...++.+...|++.
T Consensus 28 ~~Kl~ia~~L~~~Gv~~IE~g~p~~~~-~d~e~v~~i~~~~~~~~i~~l~r~~---------~~~i~~a~~al~~ag~~~ 97 (325)
T 3eeg_A 28 EEKIIVAKALDELGVDVIEAGFPVSSP-GDFNSVVEITKAVTRPTICALTRAK---------EADINIAGEALRFAKRSR 97 (325)
T ss_dssp THHHHHHHHHHHHTCSEEEEECTTSCH-HHHHHHHHHHHHCCSSEEEEECCSC---------HHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCH-hHHHHHHHHHHhCCCCEEEEeecCC---------HHHHHHHHHhhcccCCCE
Confidence 344444555566799999997533221 12334555555443333333 3543 211111222222338888
Q ss_pred EEEeccCccc---------------hHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecC-
Q 015310 102 VDFELKVASN---------------ILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVN- 164 (409)
Q Consensus 102 vDiEl~~~~~---------------~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~- 164 (409)
|.+=....+- .+.+.+ .+++.+.++..+.=+...++ .+.+.+.++++.+.|||.+-|+=|.-
T Consensus 98 v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~-~~~~~~~~~~~~~~G~~~i~l~DT~G~ 176 (325)
T 3eeg_A 98 IHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRAD-QAFLARMVEAVIEAGADVVNIPDTTGY 176 (325)
T ss_dssp EEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSC-HHHHHHHHHHHHHHTCSEEECCBSSSC
T ss_pred EEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccch-HHHHHHHHHHHHhcCCCEEEecCccCC
Confidence 8874443321 112223 35667788877765544443 57799999999999999988775543
Q ss_pred -CHhHHHHHHHHhcc-CC----CCEEEEE---cCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhh
Q 015310 165 -DITEIARIFQLLSH-CQ----VPIIAYS---VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYK 230 (409)
Q Consensus 165 -~~~D~~~ll~~~~~-~~----~p~i~~~---MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~ 230 (409)
++.++.++++.+.+ .+ .|+ .+- .--++...=+..-..|....=+++.. +-+.|+.+++++...++
T Consensus 177 ~~P~~v~~lv~~l~~~~~~~~~~~i-~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGer~GN~~lE~vv~~L~ 251 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVSNIDKAIL-SAHCHNDLGLATANSLAALQNGARQVECTINGIGERAGNTALEEVVMAME 251 (325)
T ss_dssp CCHHHHHHHHHHHHHHCSCGGGSEE-EECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCCSTTCCCBHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCCceEE-EEEeCCCCCHHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHH
Confidence 57888888776543 22 333 321 11122222222222233222222221 23689999999887776
No 453
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=85.15 E-value=2.6 Score=41.47 Aligned_cols=84 Identities=19% Similarity=0.118 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecC-------CCCC----CC-------------hhHHHHHHhcCC-CcEEEEeccCC-C
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDC-------INNF----QP-------------GKDLEIILTKKP-LPVLIVYRPKW-A 76 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~-------l~~~----~~-------------~~~l~~l~~~~~-~PiI~T~R~~~-e 76 (409)
+++.+.++++.+.|+|.||+-.-+ |... .+ .+.++.+++... .|+.+-++... .
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~ 245 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 344555666677899999997642 1110 11 122344444332 28888777642 2
Q ss_pred CCC-CCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015310 77 GGL-YEGDEHKRLEALHLAEDLGADYVDFEL 106 (409)
Q Consensus 77 GG~-~~~~~~~~~~ll~~~~~~g~dyvDiEl 106 (409)
.|. ...+.++..++.+.+.+.|+|||+|--
T Consensus 246 ~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 246 FGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 221 122457888899999999999999843
No 454
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=85.14 E-value=0.54 Score=49.51 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=30.4
Q ss_pred CEEEEEechhHHHHHHHHHHh-CCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKS-RGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~-~G~~i~v~nR~~ 401 (409)
..|+|+|+|.+|.+++..|++ .|++|+|+.|..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999 899999999864
No 455
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=85.13 E-value=0.66 Score=48.19 Aligned_cols=32 Identities=19% Similarity=0.399 Sum_probs=29.8
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
..|+|||+|-+|.++|+.|++.|.+|+|+.+.
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~ 64 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ 64 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 46999999999999999999999999999875
No 456
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=85.11 E-value=1.6 Score=41.11 Aligned_cols=84 Identities=15% Similarity=0.251 Sum_probs=56.5
Q ss_pred eEEEeeccCCHHHHHHHHHHHHh-cCCCEEEEEecCCCC------C--CC---hhHHHHHHhcCCCcEEEEeccCCCCCC
Q 015310 12 MICAPLMAQSVEQVLSNMYQAKA-EGADVVEIRLDCINN------F--QP---GKDLEIILTKKPLPVLIVYRPKWAGGL 79 (409)
Q Consensus 12 ~icv~l~~~~~~e~~~~~~~~~~-~~aD~vElRlD~l~~------~--~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~ 79 (409)
.+.+.|.+.+.+++.+.++.+.+ .|+|.||+-+.+-.. + ++ .+.++.+++..+.|+++-++...
T Consensus 100 p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~---- 175 (311)
T 1ep3_A 100 PIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNV---- 175 (311)
T ss_dssp CEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCS----
T ss_pred cEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCh----
Confidence 36788999999998888877765 799999996532110 0 11 23344455556899998887422
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEEE
Q 015310 80 YEGDEHKRLEALHLAEDLGADYVDF 104 (409)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~g~dyvDi 104 (409)
+ +..++.+.+.+.|+|+|++
T Consensus 176 ---~--~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 176 ---T--DIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp ---S--CSHHHHHHHHHTTCSEEEE
T ss_pred ---H--HHHHHHHHHHHcCCCEEEE
Confidence 1 2234566777889999998
No 457
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=85.08 E-value=7.2 Score=40.24 Aligned_cols=145 Identities=14% Similarity=0.159 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecCCCCCCCh---hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDCINNFQPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
.++...++++++.|+++|-+|.--+...+-. +++..+.+..+.|+|+.-| . ..+++.|+
T Consensus 25 ~~l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~---------------~---dlA~~~gA 86 (540)
T 3nl6_A 25 KTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDR---------------I---DVAMAIGA 86 (540)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECSC---------------S---HHHHHTTC
T ss_pred chHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCc---------------H---HHHHHcCC
Confidence 4567778888889999999997655432211 2233333556899998532 1 24567889
Q ss_pred cEEEEeccCcc-chHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcC---CCEEEEE-eecC-CH-------
Q 015310 100 DYVDFELKVAS-NILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATG---ADIIKLV-FSVN-DI------- 166 (409)
Q Consensus 100 dyvDiEl~~~~-~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~g---aDivKia-~~~~-~~------- 166 (409)
|.|=+.-+... ...++++ ..+..+=+|.|+ .+|+ .++.+.| +|++.+- +.|. +.
T Consensus 87 dGVHLgq~dl~~~~ar~~l---g~~~iiG~S~ht------~eea----~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~ 153 (540)
T 3nl6_A 87 DGIHVGQDDMPIPMIRKLV---GPDMVIGWSVGF------PEEV----DELSKMGPDMVDYIGVGTLFPTLTKKNPKKAP 153 (540)
T ss_dssp SEEEECTTSSCHHHHHHHH---CTTSEEEEEECS------HHHH----HHHHHTCC--CCEEEESCCSCCCCCC----CC
T ss_pred CEEEEChhhcCHHHHHHHh---CCCCEEEEECCC------HHHH----HHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCC
Confidence 98877654432 2223332 456778889994 2443 4566789 9999982 1222 22
Q ss_pred ---hHHHHHHHHhcc---CCCCEEEEEcCccchhhhhh
Q 015310 167 ---TEIARIFQLLSH---CQVPIIAYSVGERGLVSQLL 198 (409)
Q Consensus 167 ---~D~~~ll~~~~~---~~~p~i~~~MG~~G~~SRi~ 198 (409)
+-+.++.+...+ .++|+++++==....+.+++
T Consensus 154 ~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~ 191 (540)
T 3nl6_A 154 MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVL 191 (540)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHH
T ss_pred CCHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHH
Confidence 222334444322 47899888421334455554
No 458
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.01 E-value=0.87 Score=43.48 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEE
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIF 397 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~ 397 (409)
...++.|+|+|.+|.+++..|.+.|.+|+++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 3468999999999999999999999999999
No 459
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=84.76 E-value=28 Score=33.22 Aligned_cols=149 Identities=15% Similarity=0.099 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCC-CCC---CC---hhHHHHHHhcCCCcEEEEeccCCCCCCCCC--CHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCI-NNF---QP---GKDLEIILTKKPLPVLIVYRPKWAGGLYEG--DEHKRLEAL 91 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l-~~~---~~---~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~--~~~~~~~ll 91 (409)
|.+|+.+++.++.+.||.++=+-+--= +.. ++ .+.+..+++.++ +|+.+=| ||.... +.++|++.+
T Consensus 30 TpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d--~iI~~TT---gg~~~~~~~~eeR~~~~ 104 (314)
T 3lot_A 30 TPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSD--VVINVTT---GGGGTLGIPVEERAKVV 104 (314)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCC--CEEEECS---STTGGGTCCHHHHTTHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCC--eEEEeCC---CCcCCCCCCHHHHHHHH
Confidence 458999999999999999998776542 111 11 234455555544 4444433 343334 788887665
Q ss_pred HHHHHcCCcEEEEeccCcc----c-----------hHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCE
Q 015310 92 HLAEDLGADYVDFELKVAS----N-----------ILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADI 156 (409)
Q Consensus 92 ~~~~~~g~dyvDiEl~~~~----~-----------~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDi 156 (409)
. ++.+|..-+...+.. + +-+..+.. ... .-|..| .+++...++.|++.|
T Consensus 105 ~---~~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~--~~~------~v~~N~--~~~i~~~~~~~~e~G--- 168 (314)
T 3lot_A 105 P---ALKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEM--TRD------IVFRNT--FKDLEALSRIFKEND--- 168 (314)
T ss_dssp H---HHCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHH--GGG------CEECCC--HHHHHHHHHHHHHHT---
T ss_pred H---hcCCceeeecCCCcccccccccccccccccccchhhccc--CCC------ceecCC--HHHHHHHHHHHHHcC---
Confidence 4 346888877764321 0 00111100 000 113334 467999999999999
Q ss_pred EEEEeecCCHhHHHHHHHHhccC---CCCEEEEEcCc
Q 015310 157 IKLVFSVNDITEIARIFQLLSHC---QVPIIAYSVGE 190 (409)
Q Consensus 157 vKia~~~~~~~D~~~ll~~~~~~---~~p~i~~~MG~ 190 (409)
+|.-...-|..++..+..+..+= ....+-+.||-
T Consensus 169 i~pE~e~fd~g~l~~~~~l~~~Gll~~p~~~~~VlGv 205 (314)
T 3lot_A 169 TKPELECYDIGQIYNTAFMFHEGYLEPPLRLQFIHGI 205 (314)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCSCSSEEEEEEECC
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCCCCCceEEEEecC
Confidence 57777777999988887776532 34466677764
No 460
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=84.72 E-value=0.74 Score=47.62 Aligned_cols=34 Identities=29% Similarity=0.289 Sum_probs=30.9
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
..+++|||+|-+|.++++.|.+.|.+|+|+.+..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999853
No 461
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=84.72 E-value=0.85 Score=42.64 Aligned_cols=39 Identities=28% Similarity=0.296 Sum_probs=34.2
Q ss_pred CEEEEEechhHHHHHHHHHHhCCCeEEEEeCChHHHHhh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFEQSLLL 407 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ka~~l 407 (409)
+-++.=|+||.|++++..|.+.|++|++++|+.++.+++
T Consensus 20 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 58 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSA 58 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457777999999999999999999999999998876654
No 462
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=84.70 E-value=1.7 Score=43.94 Aligned_cols=52 Identities=25% Similarity=0.303 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhcCcCCCCCCCCCCCCCCEEEEEechhHHHHHHHHHHhCCCe-EEEEeC
Q 015310 339 CEASITAIEDAIKERGYKNGTASFGSPLAGRMFVLAGAGGAGRALAFGAKSRGAR-VVIFDI 399 (409)
Q Consensus 339 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~vlvlGaGGaarai~~aL~~~G~~-i~v~nR 399 (409)
++|.+.+++..+.+.+ .+++|++|+|.|.|-+|..++.-|.++|++ |.|.+.
T Consensus 210 g~Gv~~~~~~~~~~~G---------~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~ 262 (449)
T 1bgv_A 210 GYGSVYYVEAVMKHEN---------DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP 262 (449)
T ss_dssp HHHHHHHHHHHHHHTT---------CCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred hHHHHHHHHHHHHHcc---------CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 4677778777765432 578999999999999999999999999996 556774
No 463
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=84.69 E-value=0.63 Score=45.43 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=29.6
Q ss_pred CEEEEEechhHHHHHHHHHHhC--CCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~--G~~i~v~nR~~ 401 (409)
..++|+|+|.+|.++++.|++. |.+|.|+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 3599999999999999999997 88999998864
No 464
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=84.68 E-value=12 Score=37.68 Aligned_cols=154 Identities=18% Similarity=0.166 Sum_probs=89.3
Q ss_pred CCCeeEEEeeccCCH-HHHHHHHHHHH---------hcCCCEEEEEecCCCCCCChhHHHHHHhcCCCcEEEEeccCCCC
Q 015310 8 KNTTMICAPLMAQSV-EQVLSNMYQAK---------AEGADVVEIRLDCINNFQPGKDLEIILTKKPLPVLIVYRPKWAG 77 (409)
Q Consensus 8 ~~~~~icv~l~~~~~-~e~~~~~~~~~---------~~~aD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eG 77 (409)
.|.|.|.+-|...-. +++...++... ..++|+|=+|...-+...-...++.+.+..++|+++--
T Consensus 89 ~n~p~ia~~V~D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~dpe~~~~vVk~V~e~~dvPL~IDS------ 162 (446)
T 4djd_C 89 YHETAIAIQVSDNLSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDPAAFKAAVASVAAATQLNLVLMA------ 162 (446)
T ss_dssp CSCCEEEEEEETTSCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSSTHHHHHHHHHHHTTCCSEEEEEC------
T ss_pred CCCCeEEEEEeCCCChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCCHHHHHHHHHHHHHhCCCCEEEec------
Confidence 588999999988643 34444344331 13677777776532210001233344455799987652
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCc----EEEEeccCccchHHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHc
Q 015310 78 GLYEGDEHKRLEALHLAEDLGAD----YVDFELKVASNILGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQAT 152 (409)
Q Consensus 78 G~~~~~~~~~~~ll~~~~~~g~d----yvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~ 152 (409)
.+ -+.++++++.+.+ .--+.. +-.+.+. .+.+.+..+|+. |+ ..+.+.++.+.+.++
T Consensus 163 ----~d----pevleaALea~a~~~plI~sat~----dn~e~m~~lAa~y~~pVi~~-~~-----dl~~lkelv~~a~~~ 224 (446)
T 4djd_C 163 ----DD----PDVLKEALAGVADRKPLLYAATG----ANYEAMTALAKENNCPLAVY-GN-----GLEELAELVDKIVAL 224 (446)
T ss_dssp ----SC----HHHHHHHHGGGGGGCCEEEEECT----TTHHHHHHHHHHTTCCEEEE-CS-----SHHHHHHHHHHHHHT
T ss_pred ----CC----HHHHHHHHHhhcCcCCeeEecch----hhHHHHHHHHHHcCCcEEEE-ec-----cHHHHHHHHHHHHHC
Confidence 12 2466667665533 222332 2222332 234577888887 43 678899999999999
Q ss_pred CCCEEEEEeecCC------HhHHHHHHHH--hc---cCCCCEEEEE
Q 015310 153 GADIIKLVFSVND------ITEIARIFQL--LS---HCQVPIIAYS 187 (409)
Q Consensus 153 gaDivKia~~~~~------~~D~~~ll~~--~~---~~~~p~i~~~ 187 (409)
|-+ +|+.=|-. .+++.++-++ .. ....|+|...
T Consensus 225 GI~--~IvLDPG~~g~~~t~~~~~~iRr~AL~~~d~~LgyPvi~~~ 268 (446)
T 4djd_C 225 GHK--QLVLDPGARETSRAIADFTQIRRLAIKKRFRSFGYPIIALT 268 (446)
T ss_dssp TCC--CEEEECCCCSHHHHHHHHHHHHHHHHHSCCGGGCSCBEEEC
T ss_pred CCC--cEEECCCchhHHHHHHHHHHHHHHhhhccCcccCCCEEecc
Confidence 975 78887764 5566666333 11 2377888654
No 465
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=84.55 E-value=0.54 Score=49.04 Aligned_cols=32 Identities=31% Similarity=0.326 Sum_probs=29.7
Q ss_pred EEEEEechhHHHHHHHHHHhC------CCeEEEEeCCh
Q 015310 370 MFVLAGAGGAGRALAFGAKSR------GARVVIFDIDF 401 (409)
Q Consensus 370 ~vlvlGaGGaarai~~aL~~~------G~~i~v~nR~~ 401 (409)
.|+|+|+|.+|.++|..|++. |.+|.|+.|..
T Consensus 37 DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 37 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 599999999999999999998 99999999864
No 466
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=84.54 E-value=8.5 Score=34.84 Aligned_cols=161 Identities=13% Similarity=0.075 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCCCC----hhHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 24 QVLSNMYQAKAEGADVVEIRLDCINNFQP----GKDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 24 e~~~~~~~~~~~~aD~vElRlD~l~~~~~----~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
+..+.++.+.+.|+|.+.++ |.-..... .+.++++++..++|+|+. ||.. +.+ -.+.+++.|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~-d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~------Ggi~--~~~----~~~~~~~~Ga 98 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFL-DISATHEERAILLDVVARVAERVFIPLTVG------GGVR--SLE----DARKLLLSGA 98 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEE-ECCSSTTCHHHHHHHHHHHHTTCCSCEEEE------SSCC--SHH----HHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCCEEEEE-cCCccccCccccHHHHHHHHHhCCCCEEEE------CCcC--CHH----HHHHHHHcCC
Confidence 34444555566799999888 64332211 234556666679999984 3432 222 3455566789
Q ss_pred cEEEEeccC--ccchHHHHHhccC-CCcEEEEeccC-----------CCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCC
Q 015310 100 DYVDFELKV--ASNILGKQYSSHQ-SGTRFIVSCNL-----------DCETPSEEDLGYLVSRMQATGADIIKLVFSVND 165 (409)
Q Consensus 100 dyvDiEl~~--~~~~~~~l~~~~~-~~~kiI~S~H~-----------f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~ 165 (409)
|.|=+=-.. ..+.+.++..... ....+-+|.|. ++.. +..+..+..+++.+.|++.+=+.....+
T Consensus 99 d~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~-~~~~~~e~~~~~~~~G~~~i~~~~~~~~ 177 (252)
T 1ka9_F 99 DKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVP-TGLHAVEWAVKGVELGAGEILLTSMDRD 177 (252)
T ss_dssp SEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEE-EEEEHHHHHHHHHHHTCCEEEEEETTTT
T ss_pred CEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccc-cCCcHHHHHHHHHHcCCCEEEEecccCC
Confidence 988764322 2233444442211 12345555542 1110 1123566677777889986543322221
Q ss_pred ----HhHHHHHHHHhccCCCCEEEEE-cCccchhhhhh
Q 015310 166 ----ITEIARIFQLLSHCQVPIIAYS-VGERGLVSQLL 198 (409)
Q Consensus 166 ----~~D~~~ll~~~~~~~~p~i~~~-MG~~G~~SRi~ 198 (409)
.-|...+-++....+.|+|+.+ .+....+-+++
T Consensus 178 g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~ 215 (252)
T 1ka9_F 178 GTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAF 215 (252)
T ss_dssp TTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH
Confidence 1133333333444578887742 23223444444
No 467
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=84.52 E-value=0.9 Score=49.70 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.4
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.+++|+|||+|-+|.++++.|.+.|.+|+|+.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~ 310 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 310 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence 4679999999999999999999999999999875
No 468
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=84.48 E-value=51 Score=37.16 Aligned_cols=210 Identities=11% Similarity=0.054 Sum_probs=115.1
Q ss_pred CHHHHHHHHHHHHhcCCCE--EEE----Eec----CCCCCCChhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADV--VEI----RLD----CINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLE 89 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~--vEl----RlD----~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (409)
+.+|.++-++.+.+.|+|+ +|. ..| ++. .++.+.+..+++.. +.++-.-+|..+==|.....+....+
T Consensus 571 ~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~-~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~ 649 (1165)
T 2qf7_A 571 RTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLT-EDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKY 649 (1165)
T ss_dssp CHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHC-CCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcC-CCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHH
Confidence 3456666666666677776 886 444 222 24455666666544 44454445654444555566666667
Q ss_pred HHHHHHHcCCcEEEEeccCcc-chHHHHH-hccCCCcEEE--Eec--cCCCCCC---CHhHHHHHHHHHHHcCCCEEEEE
Q 015310 90 ALHLAEDLGADYVDFELKVAS-NILGKQY-SSHQSGTRFI--VSC--NLDCETP---SEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 90 ll~~~~~~g~dyvDiEl~~~~-~~~~~l~-~~~~~~~kiI--~S~--H~f~~tp---~~~~l~~~~~~~~~~gaDivKia 160 (409)
.++.+++.|++.+-|=..... +.++..+ .+++.+..+. +|| |.++.+- +.+.+.++++++.+.|||++-|+
T Consensus 650 ~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~ 729 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVK 729 (1165)
T ss_dssp HHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 889999999998887332221 1122222 2334444433 444 3232211 35678999999999999999888
Q ss_pred eecC--CHhHHHHHHHHhcc-CCCCEEEE--EcCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhhh
Q 015310 161 FSVN--DITEIARIFQLLSH-CQVPIIAY--SVGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231 (409)
Q Consensus 161 ~~~~--~~~D~~~ll~~~~~-~~~p~i~~--~MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~~ 231 (409)
=|.- ++.++.++.+.+.+ .+.|+-.= +.--++..+=+..-.-|....=+++.. +--+||.+++++...++.
T Consensus 730 DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~~le~vv~~L~~ 806 (1165)
T 2qf7_A 730 DMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGNTSQPCLGSIVEALSG 806 (1165)
T ss_dssp ETTCCCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHHTT
T ss_pred CccCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCCccchhHHHHHHHHHh
Confidence 6654 57788777766543 24443211 122223333333333333332233221 122677777776665553
No 469
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=84.34 E-value=10 Score=34.80 Aligned_cols=128 Identities=18% Similarity=0.242 Sum_probs=74.3
Q ss_pred HHHHHHHHhcCCCEE--EEEecCCCCCCChhHHHHHH---hcCCCcEEEEeccCCCCCCCC--CCHHHHHHHHHHHHHcC
Q 015310 26 LSNMYQAKAEGADVV--EIRLDCINNFQPGKDLEIIL---TKKPLPVLIVYRPKWAGGLYE--GDEHKRLEALHLAEDLG 98 (409)
Q Consensus 26 ~~~~~~~~~~~aD~v--ElRlD~l~~~~~~~~l~~l~---~~~~~PiI~T~R~~~eGG~~~--~~~~~~~~ll~~~~~~g 98 (409)
..+++.+...|+|.| -+|.-........+.+.++. +..+.|+|+-.- ..|.... .+.+...++.+.+.+.|
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~--~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMY--PRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEE--ECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeC--CCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 345566677899999 66655332110011222332 334788876432 2233211 24444455557888999
Q ss_pred CcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 99 ADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 99 ~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
+|||=+......+.++++... -+..+|++== -++++.++..+.+.++.+.|||-+=+
T Consensus 180 ad~i~~~~~~~~~~l~~i~~~--~~ipvva~GG--i~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 180 ADIVKTSYTGDIDSFRDVVKG--CPAPVVVAGG--PKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CSEEEECCCSSHHHHHHHHHH--CSSCEEEECC--SCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCEEEECCCCCHHHHHHHHHh--CCCCEEEEeC--CCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 999988754444555555532 3567777532 23345678888888888899984433
No 470
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=84.30 E-value=0.67 Score=48.64 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=31.8
Q ss_pred CCCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 365 PLAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 365 ~~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~ 400 (409)
.++||.++|-|+ +|.|++++..|++.|++|++.+|.
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~ 355 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK 355 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc
Confidence 577899999986 689999999999999999998863
No 471
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=84.20 E-value=0.74 Score=49.83 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCC
Q 015310 367 AGRMFVLAGAGGAGRALAFGAKSRGARVVIFDID 400 (409)
Q Consensus 367 ~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~ 400 (409)
++++|+|||+|-+|.++++.|.+.|.+|+|+.+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~ 368 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAK 368 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 3578999999999999999999999999999874
No 472
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=84.18 E-value=17 Score=34.18 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC-------hhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP-------GKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEALH 92 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~-------~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ll~ 92 (409)
|.+|+.+++.++.+.||.++=+-+-- ++-.+ .+.+..+|+.. ++.|=+|- ||....+.++|...+
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd-~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TT-----g~~~~~~~eeR~~~~- 104 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIRE-DDGRPSQRLDRFQEAISAIREVVPEIIIQIST-----GGAVGESFDKRLAPL- 104 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEEC-TTSCEECCHHHHHHHHHHHHHHCTTSEEEECS-----SCSTTCCHHHHHGGG-
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecC-CCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCC-----CCCCCCCHHHHHHHh-
Confidence 57899999999999999999887755 32211 23445555443 55555553 444334778888766
Q ss_pred HHHHcCCcEEEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHH
Q 015310 93 LAEDLGADYVDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSVNDITEIARI 172 (409)
Q Consensus 93 ~~~~~g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~~~~~D~~~l 172 (409)
++.+|+.-+.+.+.. + . . -.|..|| +.+.+.++.|++.| +|.-...-|..++..+
T Consensus 105 ---~~~Pe~asl~~gs~N-f---------~-~------~v~~n~~--~~~~~~~~~~~e~G---v~pE~e~fd~g~l~~~ 159 (282)
T 2y7e_A 105 ---ALKPEMATLNAGTLN-F---------G-D------DIFINHP--ADIIRLAEAFKQYN---VVPEVEVYESGMVDAV 159 (282)
T ss_dssp ---GGCCSEEEEECCCEE-E---------T-T------EEECCCH--HHHHHHHHHHHHTT---CEEEEEECSHHHHHHH
T ss_pred ---hcCCCEEEecccccc-c---------c-c------ccccCCH--HHHHHHHHHHHHcC---CeEEEEEECHHHHHHH
Confidence 246888776654322 0 0 0 1144454 67999999999999 5877888899999888
Q ss_pred HHHhccC----CCCEEEEEcC
Q 015310 173 FQLLSHC----QVPIIAYSVG 189 (409)
Q Consensus 173 l~~~~~~----~~p~i~~~MG 189 (409)
..+..+- ..+.+-+.||
T Consensus 160 ~~l~~~Gl~p~~p~~~~~VlG 180 (282)
T 2y7e_A 160 ARLIKKGIITQNPLHIQFVLG 180 (282)
T ss_dssp HHHHHTTSCCCSSCEEEEEEC
T ss_pred HHHHHcCCCCCCCeEEEEEEe
Confidence 8776542 3356677776
No 473
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=84.10 E-value=3.9 Score=39.98 Aligned_cols=84 Identities=12% Similarity=0.023 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhcCCCEEEEEecC------------------CCCC-C-----ChhHHHHHHhcCC-CcEEEEeccC-CC
Q 015310 23 EQVLSNMYQAKAEGADVVEIRLDC------------------INNF-Q-----PGKDLEIILTKKP-LPVLIVYRPK-WA 76 (409)
Q Consensus 23 ~e~~~~~~~~~~~~aD~vElRlD~------------------l~~~-~-----~~~~l~~l~~~~~-~PiI~T~R~~-~e 76 (409)
+++.+.++++.+.|+|.||+-.-+ +... + ..+.++.+++... .|+.+-++.. +.
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~ 240 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcccccc
Confidence 445555666678899999996532 1110 0 0122344444332 2887766653 22
Q ss_pred CCC-CCCCHHHHHHHHHHHHHcCCcEEEEec
Q 015310 77 GGL-YEGDEHKRLEALHLAEDLGADYVDFEL 106 (409)
Q Consensus 77 GG~-~~~~~~~~~~ll~~~~~~g~dyvDiEl 106 (409)
.|. ...+.++..++.+.+.+.|+|||++--
T Consensus 241 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 241 NGTVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp TSCCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 111 122457888899999999999999854
No 474
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=84.03 E-value=16 Score=34.63 Aligned_cols=142 Identities=13% Similarity=0.087 Sum_probs=83.7
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCC------CChhHHH-HHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNF------QPGKDLE-IILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHL 93 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~------~~~~~l~-~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~ 93 (409)
+.++.++-++.+.+.|.|.||.=- +... .+.+++. .+.+..+.++..-++ .. +-++.
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~g~--~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~~----------~~----~~i~~ 89 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEITS--FVHPKWIPALRDAIDVAKGIDREKGVTYAALVP----------NQ----RGLEN 89 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEE--CSCTTTCGGGTTHHHHHHHSCCCTTCEEEEECC----------SH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC--CcCcccccccCCHHHHHHHhhhcCCCeEEEEeC----------CH----HhHHH
Confidence 456677777777778999999863 2111 1122222 222222333333222 11 23677
Q ss_pred HHHcCCcEEEEeccCccc---------------hHHHHH-hccCCCcEEEEeccC-C----CCCCCHhHHHHHHHHHHHc
Q 015310 94 AEDLGADYVDFELKVASN---------------ILGKQY-SSHQSGTRFIVSCNL-D----CETPSEEDLGYLVSRMQAT 152 (409)
Q Consensus 94 ~~~~g~dyvDiEl~~~~~---------------~~~~l~-~~~~~~~kiI~S~H~-f----~~tp~~~~l~~~~~~~~~~ 152 (409)
+++.|++.|.|=....+- ...+.+ .+++.+.++-++.-. | ...-+.+.+.+.++++.+.
T Consensus 90 a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (307)
T 1ydo_A 90 ALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEF 169 (307)
T ss_dssp HHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc
Confidence 888899999986655431 112223 345567766432211 1 1222467899999999999
Q ss_pred CCCEEEEEeec--CCHhHHHHHHHHhcc
Q 015310 153 GADIIKLVFSV--NDITEIARIFQLLSH 178 (409)
Q Consensus 153 gaDivKia~~~--~~~~D~~~ll~~~~~ 178 (409)
|+|.+-|+=+. -++.++.++++.+.+
T Consensus 170 Ga~~i~l~DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 170 GISELSLGDTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp TCSCEEEECSSCCCCHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 99999888433 368898888887654
No 475
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.99 E-value=1.1 Score=42.63 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=31.5
Q ss_pred CCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCCh
Q 015310 366 LAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 366 ~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~ 401 (409)
+.+++++|+|+|-+|--++..|.+.|.+|+++.|..
T Consensus 164 ~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 164 FNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 457899999999999999999999999999998864
No 476
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=83.96 E-value=24 Score=33.40 Aligned_cols=175 Identities=10% Similarity=0.024 Sum_probs=80.7
Q ss_pred CCCCCeeEEEeecc----CCHHHHHHHHHHHHhcCCCEEEEEecCCCCCC---ChhHHHHHHhc---CCCcEEEEeccCC
Q 015310 6 ITKNTTMICAPLMA----QSVEQVLSNMYQAKAEGADVVEIRLDCINNFQ---PGKDLEIILTK---KPLPVLIVYRPKW 75 (409)
Q Consensus 6 ~~~~~~~icv~l~~----~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~---~~~~l~~l~~~---~~~PiI~T~R~~~ 75 (409)
|++..|.||.=... .+.++..+.++.+.+.|...+ |--.... ..+.+.+.++. .+..++++-.-..
T Consensus 1 ~~~~~~~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~----DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~ 76 (327)
T 1gve_A 1 MSQARPATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEI----DTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAP 76 (327)
T ss_dssp ---CCCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEE----ECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECS
T ss_pred CCCCCCCeEEcccccCCCCCHHHHHHHHHHHHHcCCCEE----EchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECC
Confidence 45566777764421 367888888999999998876 4332221 11222222221 1122444444311
Q ss_pred CCCCCCCCH-HHHHHHHHHHHHcCCcEEEEeccC-c------cchHHHHHh-ccCCCcEEEEeccCCCCCCCHhHHHHHH
Q 015310 76 AGGLYEGDE-HKRLEALHLAEDLGADYVDFELKV-A------SNILGKQYS-SHQSGTRFIVSCNLDCETPSEEDLGYLV 146 (409)
Q Consensus 76 eGG~~~~~~-~~~~~ll~~~~~~g~dyvDiEl~~-~------~~~~~~l~~-~~~~~~kiI~S~H~f~~tp~~~~l~~~~ 146 (409)
.++ ...+. .-+..+-+.+-++|.||||+=+-. + ++..+.+.. .+++.+|-|+=.. | +.+++.+.+
T Consensus 77 ~~~-~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn-~----~~~~l~~~~ 150 (327)
T 1gve_A 77 MFG-KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSN-Y----VSWEVAEIC 150 (327)
T ss_dssp CTT-CCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES-C----CHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecC-C----CHHHHHHHH
Confidence 111 12344 344555556678899999973211 1 122233322 2346666664322 1 134565555
Q ss_pred HHHHHcC---CCEEEEEeecCCHhHHHHHHHHhccCCCCEEEEEcCccc
Q 015310 147 SRMQATG---ADIIKLVFSVNDITEIARIFQLLSHCQVPIIAYSVGERG 192 (409)
Q Consensus 147 ~~~~~~g---aDivKia~~~~~~~D~~~ll~~~~~~~~p~i~~~MG~~G 192 (409)
+.+...| .+++=+-..+-+...-..++.+..+.++.++ +++++|
T Consensus 151 ~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~--a~spL~ 197 (327)
T 1gve_A 151 TLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFY--AFNPLA 197 (327)
T ss_dssp HHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEE--EECTTG
T ss_pred HHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEE--Eecccc
Confidence 5555444 2233332333222111134555444455554 444443
No 477
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=83.93 E-value=0.62 Score=45.10 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=29.7
Q ss_pred CEEEEEechhHHHHHHHHHHhC--CCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~--G~~i~v~nR~~ 401 (409)
..++|+|+|.+|.++++.|++. |.+|+|+.+..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 3699999999999999999998 88999998864
No 478
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=83.86 E-value=7.8 Score=37.21 Aligned_cols=144 Identities=15% Similarity=0.121 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCC---CCCCChhHHHHH-------HhcC-CCcEEEEeccCCCCCCCCCCHHHHHH
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCI---NNFQPGKDLEII-------LTKK-PLPVLIVYRPKWAGGLYEGDEHKRLE 89 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l---~~~~~~~~l~~l-------~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ 89 (409)
+.+++++.+++..+.|||+|.+=...- ...+..+++.++ ++.. +.||-+ -| .+-+
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI--DT------------~~~~ 128 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV--DT------------WRAQ 128 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE--EC------------SCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE--eC------------CCHH
Confidence 467888889999999999998876433 222323444443 2333 566432 21 3346
Q ss_pred HHHHHHHcCCcEE-EEeccCccchHHHHHhccCCCcEEEEeccCCCCC-CCH-------------------hHHHHHHHH
Q 015310 90 ALHLAEDLGADYV-DFELKVASNILGKQYSSHQSGTRFIVSCNLDCET-PSE-------------------EDLGYLVSR 148 (409)
Q Consensus 90 ll~~~~~~g~dyv-DiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~t-p~~-------------------~~l~~~~~~ 148 (409)
..+++++.|+++| ||--...++.++ +. .+.+..+|+.+ . .++ |.. +++.++++.
T Consensus 129 VaeaAl~aGa~iINDVsg~~d~~m~~-va--a~~g~~vVlmh-~-~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~ 203 (318)
T 2vp8_A 129 VAKAACAAGADLINDTWGGVDPAMPE-VA--AEFGAGLVCAH-T-GGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAER 203 (318)
T ss_dssp HHHHHHHHTCCEEEETTSSSSTTHHH-HH--HHHTCEEEEEC-C--------------CCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCCchHHHH-HH--HHhCCCEEEEC-C-CCCCccccccccccccccccHHHHHHHHHHHHHHH
Confidence 7888999998887 664444444433 22 23577888875 2 445 431 446677888
Q ss_pred HHHcCCCEEEEEe-----ecCCHhHHHHHHHHhcc---CCCCE
Q 015310 149 MQATGADIIKLVF-----SVNDITEIARIFQLLSH---CQVPI 183 (409)
Q Consensus 149 ~~~~gaDivKia~-----~~~~~~D~~~ll~~~~~---~~~p~ 183 (409)
+.+.|-+-=+|.. +.++.++++.+++-+.+ .+.|+
T Consensus 204 a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~lg~Pv 246 (318)
T 2vp8_A 204 AVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPV 246 (318)
T ss_dssp HHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTTSSCB
T ss_pred HHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHhCCCCE
Confidence 8888853113443 45677888888776543 35564
No 479
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=83.77 E-value=1.1 Score=45.63 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=32.1
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCC-eEEEEeCChH
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGA-RVVIFDIDFE 402 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~-~i~v~nR~~~ 402 (409)
.++++||.|+ ||.|++++..|.+.|+ +|++++|+..
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~ 262 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP 262 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4689999985 8899999999999999 6999999865
No 480
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=83.72 E-value=1.1 Score=43.44 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCCeEEEEeCChH
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGARVVIFDIDFE 402 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR~~~ 402 (409)
..+.|+++.|+|.|..|+.++..+..+|++|..++|...
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~ 175 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR 175 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccc
Confidence 457789999999999999999999999999999998643
No 481
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=83.60 E-value=0.68 Score=49.19 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=29.0
Q ss_pred CEEEEEechhHHHHHHHHHHhC------CCeEEEEeCC
Q 015310 369 RMFVLAGAGGAGRALAFGAKSR------GARVVIFDID 400 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~------G~~i~v~nR~ 400 (409)
..|+|||+|++|.++|+.|++. |.+|.|+.+.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3599999999999999999997 9999999874
No 482
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=83.60 E-value=1.1 Score=52.62 Aligned_cols=43 Identities=23% Similarity=0.285 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEec-hh-HHHHHHHHHHhCCCeEEEE-eCChHHHHh
Q 015310 364 SPLAGRMFVLAGA-GG-AGRALAFGAKSRGARVVIF-DIDFEQSLL 406 (409)
Q Consensus 364 ~~~~~~~vlvlGa-GG-aarai~~aL~~~G~~i~v~-nR~~~ka~~ 406 (409)
..++||.+||-|+ || .|++++..|.+.|++|+++ .|+.+++++
T Consensus 671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~ 716 (1887)
T 2uv8_A 671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTD 716 (1887)
T ss_dssp BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHH
Confidence 4578999999997 45 9999999999999998888 687766644
No 483
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=83.58 E-value=34 Score=33.39 Aligned_cols=191 Identities=12% Similarity=0.105 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCC--hhHHHHHHhc-CCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHc
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQP--GKDLEIILTK-KPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDL 97 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~--~~~l~~l~~~-~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~ 97 (409)
+.++.++-++.+.+.|.|.+|.=. +...+ .+.+..+++. .+.+++.-.|. ..+. ++.+++.
T Consensus 23 ~~~~k~~ia~~L~~~Gv~~IE~g~---p~~~~~~~~~~~~i~~~~~~~~v~~~~r~---------~~~d----i~~a~~~ 86 (382)
T 2ztj_A 23 STQDKVEIAKALDEFGIEYIEVTT---PVASPQSRKDAEVLASLGLKAKVVTHIQC---------RLDA----AKVAVET 86 (382)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECC---TTSCHHHHHHHHHHHTSCCSSEEEEEEES---------CHHH----HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCcCEEEEcC---CcCCHHHHHHHHHHHhcCCCcEEEEEccc---------Chhh----HHHHHHc
Confidence 346666667777778999999843 22222 1234444432 24455555553 1211 5778889
Q ss_pred CCcEEEEeccCcc--------------chHHHHH-hccCCC--cEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEE
Q 015310 98 GADYVDFELKVAS--------------NILGKQY-SSHQSG--TRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLV 160 (409)
Q Consensus 98 g~dyvDiEl~~~~--------------~~~~~l~-~~~~~~--~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia 160 (409)
|++.|.+=....+ +...+.+ .+++.+ .++-+|+=+...++ .+.+.+.++.+.+. ||.+-|+
T Consensus 87 g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~-~~~~~~~~~~~~~~-a~~i~l~ 164 (382)
T 2ztj_A 87 GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSE-EQDLLAVYEAVAPY-VDRVGLA 164 (382)
T ss_dssp TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSC-HHHHHHHHHHHGGG-CSEEEEE
T ss_pred CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCC-HHHHHHHHHHHHHh-cCEEEec
Confidence 9998887543322 1122222 345556 88999987755443 57899999999999 9999887
Q ss_pred eecC--CHhHHHHHHHHhcc---CCCCEEEEE---cCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhh
Q 015310 161 FSVN--DITEIARIFQLLSH---CQVPIIAYS---VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYK 230 (409)
Q Consensus 161 ~~~~--~~~D~~~ll~~~~~---~~~p~i~~~---MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~ 230 (409)
=|.- ++.++.++++.+.+ .+.| |.+- .--++...=+..-..|....=+++.. +-..|+.+++++.-.+.
T Consensus 165 DT~G~~~P~~~~~lv~~l~~~~~~~~~-i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv~~L~ 242 (382)
T 2ztj_A 165 DTVGVATPRQVYALVREVRRVVGPRVD-IEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGERNGITPLGGFLARMY 242 (382)
T ss_dssp ETTSCCCHHHHHHHHHHHHHHHTTTSE-EEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCe-EEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccccccchhHHHHHHHHH
Confidence 5433 57777777766543 2344 3432 12223333333333344333333322 34689999999875543
No 484
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=83.55 E-value=0.81 Score=46.19 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=29.8
Q ss_pred CEEEEEechhHHHHHHHHHHhC--CCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAKSR--GARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~~~--G~~i~v~nR~~ 401 (409)
++++|||+|.+|.+++..|.++ |.+|+|+++..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5799999999999999999987 77999999864
No 485
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=83.49 E-value=1.5 Score=42.61 Aligned_cols=39 Identities=5% Similarity=-0.152 Sum_probs=31.2
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCCCeEEEEeCChHHHH
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRGARVVIFDIDFEQSL 405 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G~~i~v~nR~~~ka~ 405 (409)
..|++|||+|+ |++|.+++..+...|++|+.+. +.+|.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~ 202 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD 202 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence 35789999999 8899999999999999766655 455544
No 486
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=83.39 E-value=1.1 Score=55.29 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=35.3
Q ss_pred CCCCCEEEEEec-hh-HHHHHHHHHHhCCCeEEEEeCChHH
Q 015310 365 PLAGRMFVLAGA-GG-AGRALAFGAKSRGARVVIFDIDFEQ 403 (409)
Q Consensus 365 ~~~~~~vlvlGa-GG-aarai~~aL~~~G~~i~v~nR~~~k 403 (409)
.++||.+||-|+ +| .|++++..|++.|++|++++|+.++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~ 2173 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDD 2173 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 478999999986 57 9999999999999999999998766
No 487
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=83.37 E-value=3.2 Score=40.53 Aligned_cols=87 Identities=11% Similarity=0.146 Sum_probs=59.8
Q ss_pred CCeeEEEeeccCCHHHHHHHHHHHH---hcCCCEEEEEecCCC-----CC-CChhHHH----HHHhcCCCcEEEEeccCC
Q 015310 9 NTTMICAPLMAQSVEQVLSNMYQAK---AEGADVVEIRLDCIN-----NF-QPGKDLE----IILTKKPLPVLIVYRPKW 75 (409)
Q Consensus 9 ~~~~icv~l~~~~~~e~~~~~~~~~---~~~aD~vElRlD~l~-----~~-~~~~~l~----~l~~~~~~PiI~T~R~~~ 75 (409)
..| +.+.|.+.+.+|..+.++.+. ..++|++|+=+-+=. .+ .+.+.+. .+++..++|+++-+|+.
T Consensus 126 ~~p-vivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~- 203 (354)
T 4ef8_A 126 KKP-LFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPY- 203 (354)
T ss_dssp TCC-EEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCC-
T ss_pred CCc-EEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCC-
Confidence 345 669999999999988888775 468999999886411 11 1112333 34455689999999974
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcC-CcEEE
Q 015310 76 AGGLYEGDEHKRLEALHLAEDLG-ADYVD 103 (409)
Q Consensus 76 eGG~~~~~~~~~~~ll~~~~~~g-~dyvD 103 (409)
.+.++..++.+.+.+.| +|.|-
T Consensus 204 ------~d~~~~~~~a~~~~~~Gg~d~I~ 226 (354)
T 4ef8_A 204 ------FDFAHFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp ------CSHHHHHHHHHHHHTCTTEEEEE
T ss_pred ------CCHHHHHHHHHHHHhCCCccEEE
Confidence 24666667777777787 88764
No 488
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=83.36 E-value=14 Score=34.81 Aligned_cols=149 Identities=16% Similarity=0.151 Sum_probs=83.3
Q ss_pred HHhcCCCEEEEEecCCC----CCCC------h---hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHH-c
Q 015310 32 AKAEGADVVEIRLDCIN----NFQP------G---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED-L 97 (409)
Q Consensus 32 ~~~~~aD~vElRlD~l~----~~~~------~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~-~ 97 (409)
+.+.|+|++ +-=|.+. ..++ . ...+.+.+..+.|+|+ .- -.-|.+..+.++-++--.+.++ .
T Consensus 50 ~e~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD--~pfgsy~~s~~~a~~na~rl~~ea 125 (281)
T 1oy0_A 50 FDEAGIPVL-LVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVV-AD--LPFGSYEAGPTAALAAATRFLKDG 125 (281)
T ss_dssp HHTTTCCEE-EECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EE--CCTTSSTTCHHHHHHHHHHHHHTT
T ss_pred HHHcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EE--CCCCcccCCHHHHHHHHHHHHHHh
Confidence 345799999 6555432 1111 1 2334555667888887 32 2334455566655554445555 8
Q ss_pred CCcEEEEeccCccchHHHHHhccCCCcEEEE-------eccC---C---CCCCCHhHHHHHHHHHHHcCCCEEEEEeecC
Q 015310 98 GADYVDFELKVASNILGKQYSSHQSGTRFIV-------SCNL---D---CETPSEEDLGYLVSRMQATGADIIKLVFSVN 164 (409)
Q Consensus 98 g~dyvDiEl~~~~~~~~~l~~~~~~~~kiI~-------S~H~---f---~~tp~~~~l~~~~~~~~~~gaDivKia~~~~ 164 (409)
|++.|=||-.. +....+..+...++.+++ |.|. | -+|...+++++....+++.|||.+=+=..|
T Consensus 126 Ga~aVklEdg~--e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp- 202 (281)
T 1oy0_A 126 GAHAVKLEGGE--RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVP- 202 (281)
T ss_dssp CCSEEEEEBSG--GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEESCC-
T ss_pred CCeEEEECCcH--HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCC-
Confidence 89999999763 222233222233555542 1121 1 123223667778888889999988776654
Q ss_pred CHhHHHHHHHHhccCCCCEEEEEcCcc
Q 015310 165 DITEIARIFQLLSHCQVPIIAYSVGER 191 (409)
Q Consensus 165 ~~~D~~~ll~~~~~~~~p~i~~~MG~~ 191 (409)
+++.+ +++...++|+|.|+-|+.
T Consensus 203 --~~~a~--~it~~l~iP~igIGaG~~ 225 (281)
T 1oy0_A 203 --AELAT--QITGKLTIPTVGIGAGPN 225 (281)
T ss_dssp --HHHHH--HHHHHCSSCEEEESSCSC
T ss_pred --HHHHH--HHHHhCCCCEEEeCCCCC
Confidence 23332 445556799999877753
No 489
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=83.35 E-value=0.57 Score=46.72 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=29.9
Q ss_pred EEEEEechhHHHHHHHHHHhCC-----CeEEEEeCCh
Q 015310 370 MFVLAGAGGAGRALAFGAKSRG-----ARVVIFDIDF 401 (409)
Q Consensus 370 ~vlvlGaGGaarai~~aL~~~G-----~~i~v~nR~~ 401 (409)
.++|||+|.+|.+++..|.+.| .+|+|+.+..
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQG 68 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCS
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCC
Confidence 6999999999999999999999 8999998875
No 490
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=83.28 E-value=14 Score=35.11 Aligned_cols=126 Identities=17% Similarity=0.064 Sum_probs=67.9
Q ss_pred HHHHHhcCCCEEEEEecCCCCCCChhHHH---HHH---hcCCCcEEEEeccCCCCCCCCCCH-HHHHHHHHHHHHcCCcE
Q 015310 29 MYQAKAEGADVVEIRLDCINNFQPGKDLE---IIL---TKKPLPVLIVYRPKWAGGLYEGDE-HKRLEALHLAEDLGADY 101 (409)
Q Consensus 29 ~~~~~~~~aD~vElRlD~l~~~~~~~~l~---~l~---~~~~~PiI~T~R~~~eGG~~~~~~-~~~~~ll~~~~~~g~dy 101 (409)
++.+.+.|||+|=+=+-+=.+.+..++++ ++. +..++|+++-+-.....-.-+.++ +...+..+.+.++|+||
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~ 193 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADL 193 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSE
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCE
Confidence 45556789999982221112211223333 333 346999988765432221112233 44444577888899999
Q ss_pred EEEeccC----ccchHHHHHhc-cC-CCcE-EEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEE
Q 015310 102 VDFELKV----ASNILGKQYSS-HQ-SGTR-FIVSCNLDCETPSEEDLGYLVSRMQATGADIIKL 159 (409)
Q Consensus 102 vDiEl~~----~~~~~~~l~~~-~~-~~~k-iI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKi 159 (409)
+=++... ..+.+.+++.. .. -... |++| +-++.+++.+.++...+.|++.+=+
T Consensus 194 iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~a-----GG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 194 YKVEMPLYGKGARSDLLTASQRLNGHINMPWVILS-----SGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp EEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECC-----TTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred EEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEe-----cCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9999842 12223333321 01 2344 6555 2334567777777777778765543
No 491
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=83.23 E-value=1.4 Score=40.05 Aligned_cols=39 Identities=23% Similarity=0.252 Sum_probs=27.4
Q ss_pred CCEEEEEechhHHHHHHHH--HHhCCC-eEEEEeCChHHHHh
Q 015310 368 GRMFVLAGAGGAGRALAFG--AKSRGA-RVVIFDIDFEQSLL 406 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~a--L~~~G~-~i~v~nR~~~ka~~ 406 (409)
..+++|+|+|.+|++.+.. ....|+ -+-+++++++++..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~ 126 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT 126 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTC
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHh
Confidence 3579999999999999885 345577 47799999887654
No 492
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=83.18 E-value=0.96 Score=46.29 Aligned_cols=32 Identities=25% Similarity=0.350 Sum_probs=29.1
Q ss_pred CCEEEEEechhHHHHHHHHHHhCCCeEEEEeC
Q 015310 368 GRMFVLAGAGGAGRALAFGAKSRGARVVIFDI 399 (409)
Q Consensus 368 ~~~vlvlGaGGaarai~~aL~~~G~~i~v~nR 399 (409)
...++|+|+|.+|.+++..|++.|.+++|+.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 45799999999999999999999999988865
No 493
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=83.17 E-value=0.81 Score=48.26 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=29.4
Q ss_pred CEEEEEechhHHHHHHHHHH---h-CCCeEEEEeCCh
Q 015310 369 RMFVLAGAGGAGRALAFGAK---S-RGARVVIFDIDF 401 (409)
Q Consensus 369 ~~vlvlGaGGaarai~~aL~---~-~G~~i~v~nR~~ 401 (409)
..|+|||+|.+|.++|..|+ + .|.+|.|+.+..
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 35999999999999999999 6 899999998764
No 494
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=83.03 E-value=1.6 Score=44.11 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=32.8
Q ss_pred CCCCCCEEEEEechhHHHHHHHHHHhCCC---eEEEEeCC
Q 015310 364 SPLAGRMFVLAGAGGAGRALAFGAKSRGA---RVVIFDID 400 (409)
Q Consensus 364 ~~~~~~~vlvlGaGGaarai~~aL~~~G~---~i~v~nR~ 400 (409)
.+++..++++.|||-||-+++.-|...|. +|++++|.
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETT
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecc
Confidence 45677789999999999999999999998 69999874
No 495
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.01 E-value=31 Score=32.38 Aligned_cols=199 Identities=17% Similarity=0.079 Sum_probs=110.8
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHhcC-CCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHcCC
Q 015310 21 SVEQVLSNMYQAKAEGADVVEIRLDCINNFQPGKDLEIILTKK-PLPVLIVYRPKWAGGLYEGDEHKRLEALHLAEDLGA 99 (409)
Q Consensus 21 ~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~ 99 (409)
+.++.++-++.+.+.|.|.||.=.-... ..+.+.+..+.+.. +.++..-.|.. .+.-...++.+...|+
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g~p~~~-~~d~e~v~~i~~~~~~~~i~~l~~~~---------~~di~~a~~~~~~ag~ 94 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAGFPISS-PGDFECVKAIAKAIKHCSVTGLARCV---------EGDIDRAEEALKDAVS 94 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECGGGC-HHHHHHHHHHHHHCCSSEEEEEEESS---------HHHHHHHHHHHTTCSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-ccHHHHHHHHHHhcCCCEEEEEecCC---------HHHHHHHHHHHhhcCC
Confidence 3455666666667789999998642111 11234455555433 45555555632 2222223333444678
Q ss_pred cEEEEeccCccch---------------HHHHH-hccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCCCEEEEEeec
Q 015310 100 DYVDFELKVASNI---------------LGKQY-SSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGADIIKLVFSV 163 (409)
Q Consensus 100 dyvDiEl~~~~~~---------------~~~l~-~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~~ 163 (409)
+.|.+=....+-. +.+.+ .+++.+.++..|.=+...+ +.+.+.+.++++.+.|||.+-++=|.
T Consensus 95 ~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~-~~~~~~~~~~~~~~~G~~~i~l~DT~ 173 (293)
T 3ewb_X 95 PQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRS-DRAFLIEAVQTAIDAGATVINIPDTV 173 (293)
T ss_dssp EEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGS-CHHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCC-CHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 8888765543311 22333 3456677777776543333 34678999999999999998888554
Q ss_pred C--CHhHHHHHHHHhccC-C----CCEEEEE---cCccchhhhhhcCCCCCccccccCCC-CCCCCCCCHHHHHhhhhh
Q 015310 164 N--DITEIARIFQLLSHC-Q----VPIIAYS---VGERGLVSQLLSPKFNGALVYGSLKG-TPVLGLPTVESLRQTYKV 231 (409)
Q Consensus 164 ~--~~~D~~~ll~~~~~~-~----~p~i~~~---MG~~G~~SRi~~~~~Gs~ltf~~l~~-~sAPGQ~~~~~l~~~~~~ 231 (409)
- ++.++.++++.+.+. + .| +.+- .--++...=+..-..|....=+++.. +-+.|+.+++++...++.
T Consensus 174 G~~~P~~v~~lv~~l~~~~~~~~~~~-l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~~ 251 (293)
T 3ewb_X 174 GYTNPTEFGQLFQDLRREIKQFDDII-FASHCHDDLGMATANALAAIENGARRVEGTINGIGERAGNTALEEVAVALHI 251 (293)
T ss_dssp SCCCHHHHHHHHHHHHHHCTTGGGSE-EEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCTTTCBCBHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCccCce-EEEEeCCCcChHHHHHHHHHHhCCCEEEeeccccccccccHhHHHHHHHHHh
Confidence 3 688888887765432 1 22 3331 11122233233223343332233322 246899999998877653
No 496
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=82.97 E-value=1.2 Score=45.66 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=32.0
Q ss_pred CCCEEEEEec-hhHHHHHHHHHHhCCC-eEEEEeCChH
Q 015310 367 AGRMFVLAGA-GGAGRALAFGAKSRGA-RVVIFDIDFE 402 (409)
Q Consensus 367 ~~~~vlvlGa-GGaarai~~aL~~~G~-~i~v~nR~~~ 402 (409)
.++++||.|+ ||.|++++..|.+.|+ +|++++|+..
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~ 295 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP 295 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc
Confidence 4689999985 8899999999999999 7999999864
No 497
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=82.90 E-value=18 Score=34.46 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhcCCCEEEEEecCCCCC----CCh---hHHHHHHhcCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHH
Q 015310 24 QVLSNMYQAKAEGADVVEIRLDCINNF----QPG---KDLEIILTKKPLPVLIVYRPKWAGGLYEGDEHKRLEALHLAED 96 (409)
Q Consensus 24 e~~~~~~~~~~~~aD~vElRlD~l~~~----~~~---~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 96 (409)
++++.+++..+.|||+|-+....-... +.. +.++.+++..+.|+.+- = .+.++.+-+.++++++
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~-D--------T~~~~~~~~V~eaal~ 145 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMII-G--------CGVEEKDAEIFPVIGE 145 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEE-C--------CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEE-C--------CCCCCCCHHHHHHHHH
Confidence 445556666789999999999753321 111 23334445568898761 0 2457788899999999
Q ss_pred cCCc---E-EEEeccCccchHHHHHhccCCCcEEEEeccCCCCCCCHhHHHHHHHHHHHcCC
Q 015310 97 LGAD---Y-VDFELKVASNILGKQYSSHQSGTRFIVSCNLDCETPSEEDLGYLVSRMQATGA 154 (409)
Q Consensus 97 ~g~d---y-vDiEl~~~~~~~~~l~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~ga 154 (409)
.|++ . =|+.....++..+ + +.+.+..+|+.+-. +.+.+.++++.+.++|-
T Consensus 146 aga~~k~iINdvs~~~~~~~~~-~--aa~~g~~vv~m~~~-----dv~~l~~~~~~a~~~Gi 199 (310)
T 2h9a_B 146 ALSGRNCLLSSATKDNYKPIVA-T--CMVHGHSVVASAPL-----DINLSKQLNIMIMEMNL 199 (310)
T ss_dssp HTTTSCCEEEEECTTTHHHHHH-H--HHHHTCEEEEECSS-----CHHHHHHHHHHHHTTTC
T ss_pred hCCCCCCEEEECCCCccHHHHH-H--HHHhCCCEEEEChh-----HHHHHHHHHHHHHHCCC
Confidence 9987 4 4887654333322 2 23457778776421 35678888888888885
No 498
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=82.85 E-value=0.93 Score=46.26 Aligned_cols=35 Identities=26% Similarity=0.280 Sum_probs=30.6
Q ss_pred CCCEEEEEechhHHHH-HHHHHHhCCCeEEEEeCCh
Q 015310 367 AGRMFVLAGAGGAGRA-LAFGAKSRGARVVIFDIDF 401 (409)
Q Consensus 367 ~~~~vlvlGaGGaara-i~~aL~~~G~~i~v~nR~~ 401 (409)
+.|+++|+|.||+|.+ ++..|.++|++|+++++..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3589999999999996 7889999999999999764
No 499
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=82.80 E-value=7.8 Score=35.00 Aligned_cols=114 Identities=12% Similarity=0.079 Sum_probs=62.6
Q ss_pred CCCeeEEEeec---cCCHHHHHHHHHHHHhcCCCEEEEEecCC-----------CCCCC--hhHHHHHHhcCCCcEEEEe
Q 015310 8 KNTTMICAPLM---AQSVEQVLSNMYQAKAEGADVVEIRLDCI-----------NNFQP--GKDLEIILTKKPLPVLIVY 71 (409)
Q Consensus 8 ~~~~~icv~l~---~~~~~e~~~~~~~~~~~~aD~vElRlD~l-----------~~~~~--~~~l~~l~~~~~~PiI~T~ 71 (409)
++.-+|.+... ..+.++.++ .+.+.|.|.||++.+.. ...++ .++++..++..++.+....
T Consensus 7 k~~mklg~~~~~~~~~~~~~~l~---~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~ 83 (262)
T 3p6l_A 7 KNGWRLGMQSYSFHLFPLTEALD---KTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTG 83 (262)
T ss_dssp HTTEEEEEEGGGGTTSCHHHHHH---HHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hcCcEEEEEecccCCCCHHHHHH---HHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 34556666543 334555554 45567999999997531 11121 2345555555666654332
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeccCccchHHHHH-hccCCCcEEEEeccC
Q 015310 72 RPKWAGGLYEGDEHKRLEALHLAEDLGADYVDFELKVASNILGKQY-SSHQSGTRFIVSCNL 132 (409)
Q Consensus 72 R~~~eGG~~~~~~~~~~~ll~~~~~~g~dyvDiEl~~~~~~~~~l~-~~~~~~~kiI~S~H~ 132 (409)
-.. ..+.+...+.++.|.++|+.+|=+.-. .+.++++. .+++.++++.+=.|.
T Consensus 84 ~~~------~~~~~~~~~~i~~A~~lGa~~v~~~~~--~~~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 84 VYV------AEKSSDWEKMFKFAKAMDLEFITCEPA--LSDWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp EEC------CSSTTHHHHHHHHHHHTTCSEEEECCC--GGGHHHHHHHHHHHTCEEEEECCS
T ss_pred ccC------CccHHHHHHHHHHHHHcCCCEEEecCC--HHHHHHHHHHHHHhCCEEEEEeCC
Confidence 211 123455667788888899888877532 23334444 233456665555554
No 500
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=82.68 E-value=0.82 Score=43.43 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=29.1
Q ss_pred CCCCEEEEEec-hhHHHHHHHHHHhCC--CeEEEEeCC
Q 015310 366 LAGRMFVLAGA-GGAGRALAFGAKSRG--ARVVIFDID 400 (409)
Q Consensus 366 ~~~~~vlvlGa-GGaarai~~aL~~~G--~~i~v~nR~ 400 (409)
..+++|||.|| |+.|++++..|.+.| ++|++.+|.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 45789999998 889999999999999 477777775
Done!