Query 015313
Match_columns 409
No_of_seqs 136 out of 2155
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 05:08:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015313.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015313hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1022 FAA1 Long-chain acyl-C 100.0 2.2E-57 4.7E-62 435.8 34.9 369 2-409 17-451 (613)
2 KOG1176 Acyl-CoA synthetase [L 100.0 1.3E-57 2.8E-62 434.1 33.1 364 13-409 28-410 (537)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 1.9E-56 4.1E-61 439.4 34.8 373 1-409 11-403 (534)
4 PTZ00342 acyl-CoA synthetase; 100.0 3.3E-56 7.1E-61 447.6 37.0 382 2-409 62-572 (746)
5 KOG1177 Long chain fatty acid 100.0 3.3E-55 7.1E-60 391.3 28.5 373 2-409 51-463 (596)
6 PLN02736 long-chain acyl-CoA s 100.0 1.3E-54 2.9E-59 437.2 35.5 379 2-409 45-489 (651)
7 PLN02614 long-chain acyl-CoA s 100.0 1.4E-54 3E-59 436.3 34.0 378 2-409 46-498 (666)
8 COG0365 Acs Acyl-coenzyme A sy 100.0 9.3E-55 2E-59 412.3 28.9 365 7-409 15-398 (528)
9 PLN02861 long-chain-fatty-acid 100.0 3E-53 6.4E-58 426.9 35.2 378 2-409 44-495 (660)
10 PF00501 AMP-binding: AMP-bind 100.0 5.2E-54 1.1E-58 412.1 26.8 370 7-409 1-390 (417)
11 KOG1256 Long-chain acyl-CoA sy 100.0 2.4E-53 5.2E-58 402.2 30.7 379 1-409 75-529 (691)
12 PRK07788 acyl-CoA synthetase; 100.0 7.8E-53 1.7E-57 417.6 33.7 372 2-409 50-429 (549)
13 PLN02387 long-chain-fatty-acid 100.0 1.1E-52 2.4E-57 424.6 35.3 380 2-409 59-537 (696)
14 PRK06334 long chain fatty acid 100.0 1.5E-52 3.2E-57 413.6 34.9 370 2-409 20-412 (539)
15 PRK08180 feruloyl-CoA synthase 100.0 3.5E-52 7.5E-57 417.2 36.2 370 2-409 40-442 (614)
16 PTZ00216 acyl-CoA synthetase; 100.0 2.9E-52 6.3E-57 422.4 35.4 383 2-409 70-538 (700)
17 PRK13295 cyclohexanecarboxylat 100.0 9E-52 1.9E-56 409.6 36.4 373 2-409 25-421 (547)
18 PLN02654 acetate-CoA ligase 100.0 7.3E-52 1.6E-56 417.2 34.6 375 2-409 88-515 (666)
19 PRK08314 long-chain-fatty-acid 100.0 2.4E-51 5.2E-56 407.0 34.7 371 1-405 10-409 (546)
20 PLN02860 o-succinylbenzoate-Co 100.0 2.7E-51 5.9E-56 407.3 35.0 370 2-409 8-416 (563)
21 PRK12582 acyl-CoA synthetase; 100.0 6.1E-51 1.3E-55 409.0 35.4 373 2-409 50-454 (624)
22 PRK13382 acyl-CoA synthetase; 100.0 8.9E-51 1.9E-55 401.3 34.7 371 2-409 44-418 (537)
23 PRK06839 acyl-CoA synthetase; 100.0 1.2E-50 2.7E-55 397.4 35.2 366 2-409 3-373 (496)
24 PRK05677 long-chain-fatty-acid 100.0 1.5E-50 3.3E-55 402.0 36.0 374 2-409 25-435 (562)
25 PRK07656 long-chain-fatty-acid 100.0 1.5E-50 3.2E-55 398.5 34.6 374 1-409 5-394 (513)
26 PLN02430 long-chain-fatty-acid 100.0 1.7E-50 3.7E-55 406.3 35.2 379 2-409 43-495 (660)
27 PTZ00237 acetyl-CoA synthetase 100.0 4.3E-51 9.3E-56 410.4 30.8 375 4-409 62-494 (647)
28 PRK07529 AMP-binding domain pr 100.0 1.3E-50 2.9E-55 406.6 34.2 371 2-409 26-447 (632)
29 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.5E-50 3.2E-55 406.9 34.1 373 4-409 60-477 (625)
30 PRK07514 malonyl-CoA synthase; 100.0 8.7E-50 1.9E-54 392.1 35.9 370 2-409 4-379 (504)
31 PRK04319 acetyl-CoA synthetase 100.0 3.7E-50 8.1E-55 399.9 33.7 370 5-409 47-434 (570)
32 PLN02246 4-coumarate--CoA liga 100.0 6.9E-50 1.5E-54 395.4 35.0 374 1-409 23-414 (537)
33 PLN02574 4-coumarate--CoA liga 100.0 1E-49 2.3E-54 395.7 36.3 366 5-409 44-432 (560)
34 PRK00174 acetyl-CoA synthetase 100.0 4.8E-50 1E-54 403.9 34.1 373 4-409 70-485 (637)
35 TIGR02316 propion_prpE propion 100.0 5.3E-50 1.2E-54 402.4 34.2 368 4-404 55-464 (628)
36 PRK09274 peptide synthase; Pro 100.0 6.6E-50 1.4E-54 397.0 33.0 366 1-409 6-422 (552)
37 PRK06060 acyl-CoA synthetase; 100.0 6.8E-50 1.5E-54 406.8 33.3 357 2-409 5-367 (705)
38 PRK06145 acyl-CoA synthetase; 100.0 1.8E-49 3.8E-54 389.2 34.4 368 1-409 2-375 (497)
39 PRK05605 long-chain-fatty-acid 100.0 1.9E-49 4E-54 395.4 35.0 374 1-409 32-447 (573)
40 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2.1E-49 4.6E-54 391.1 34.6 374 1-409 23-410 (527)
41 PRK08316 acyl-CoA synthetase; 100.0 3.7E-49 8E-54 389.5 35.6 373 2-409 12-397 (523)
42 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 5.9E-49 1.3E-53 388.9 36.8 373 2-409 23-419 (538)
43 PRK07638 acyl-CoA synthetase; 100.0 1.3E-49 2.9E-54 388.9 31.9 359 1-409 1-363 (487)
44 PRK03640 O-succinylbenzoic aci 100.0 2.8E-49 6E-54 386.5 33.7 357 1-409 2-362 (483)
45 PRK05857 acyl-CoA synthetase; 100.0 1.6E-49 3.5E-54 392.6 32.2 370 2-409 15-404 (540)
46 PRK05852 acyl-CoA synthetase; 100.0 7.4E-49 1.6E-53 387.8 35.7 375 2-409 17-410 (534)
47 PRK06155 crotonobetaine/carnit 100.0 6.9E-49 1.5E-53 388.2 35.2 370 1-409 21-402 (542)
48 COG1021 EntE Peptide arylation 100.0 1.9E-50 4.1E-55 353.2 20.6 373 2-409 29-416 (542)
49 PRK06187 long-chain-fatty-acid 100.0 6.9E-49 1.5E-53 387.3 34.4 373 1-409 6-397 (521)
50 PRK06087 short chain acyl-CoA 100.0 1E-48 2.3E-53 388.0 35.7 372 2-409 24-412 (547)
51 PRK07769 long-chain-fatty-acid 100.0 9.9E-49 2.1E-53 393.9 33.9 365 1-405 21-443 (631)
52 PRK07786 long-chain-fatty-acid 100.0 1.4E-48 3E-53 386.4 33.9 372 1-409 17-401 (542)
53 PRK12492 long-chain-fatty-acid 100.0 1.8E-48 3.8E-53 387.2 34.3 374 2-409 25-443 (562)
54 PRK07470 acyl-CoA synthetase; 100.0 2.5E-48 5.4E-53 383.7 34.4 372 1-409 7-396 (528)
55 PRK12476 putative fatty-acid-- 100.0 2E-48 4.4E-53 390.0 33.7 365 1-405 34-454 (612)
56 PRK08315 AMP-binding domain pr 100.0 4.4E-48 9.5E-53 384.7 35.8 374 1-409 16-429 (559)
57 PRK08043 bifunctional acyl-[ac 100.0 6.9E-49 1.5E-53 399.7 30.6 357 2-399 205-574 (718)
58 PRK06188 acyl-CoA synthetase; 100.0 3.7E-48 8E-53 382.2 34.4 371 2-409 13-395 (524)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 4.5E-48 9.8E-53 381.0 34.9 365 3-404 2-378 (515)
60 TIGR02262 benz_CoA_lig benzoat 100.0 6.3E-48 1.4E-52 379.1 35.9 371 4-409 7-386 (508)
61 PRK08633 2-acyl-glycerophospho 100.0 1.8E-48 3.8E-53 417.8 34.2 372 2-409 616-1021(1146)
62 PLN02330 4-coumarate--CoA liga 100.0 4.3E-48 9.4E-53 383.2 34.3 370 1-409 28-419 (546)
63 PRK10524 prpE propionyl-CoA sy 100.0 6.3E-48 1.4E-52 388.1 35.3 373 4-409 56-475 (629)
64 PRK09088 acyl-CoA synthetase; 100.0 4.8E-48 1E-52 378.1 32.6 354 8-409 2-363 (488)
65 PRK07059 Long-chain-fatty-acid 100.0 1.1E-47 2.3E-52 381.5 35.2 373 2-409 24-437 (557)
66 PRK08008 caiC putative crotono 100.0 1.5E-47 3.2E-52 377.4 35.2 372 2-409 8-400 (517)
67 PRK10252 entF enterobactin syn 100.0 3.6E-48 7.7E-53 419.6 33.4 358 2-405 459-827 (1296)
68 PRK12467 peptide synthase; Pro 100.0 2.7E-48 6E-53 448.4 34.1 356 2-405 3096-3460(3956)
69 PRK06178 acyl-CoA synthetase; 100.0 2E-47 4.4E-52 380.3 35.5 374 1-409 33-444 (567)
70 PRK10946 entE enterobactin syn 100.0 1.7E-47 3.7E-52 378.0 34.6 373 2-409 26-411 (536)
71 PRK07787 acyl-CoA synthetase; 100.0 1.5E-47 3.2E-52 372.7 33.4 338 11-409 10-352 (471)
72 PRK13383 acyl-CoA synthetase; 100.0 2E-47 4.3E-52 376.1 34.1 360 1-409 35-398 (516)
73 PRK12583 acyl-CoA synthetase; 100.0 3.5E-47 7.6E-52 378.2 35.6 373 2-409 19-430 (558)
74 PRK05851 long-chain-fatty-acid 100.0 1.2E-47 2.6E-52 378.0 31.7 358 1-409 1-398 (525)
75 TIGR03443 alpha_am_amid L-amin 100.0 5.9E-48 1.3E-52 419.5 32.3 365 2-405 237-646 (1389)
76 PLN03102 acyl-activating enzym 100.0 4.6E-47 1E-51 377.7 34.7 369 2-409 15-422 (579)
77 PRK08751 putative long-chain f 100.0 3.9E-47 8.5E-52 377.8 33.5 374 2-409 26-439 (560)
78 PRK06710 long-chain-fatty-acid 100.0 4.1E-47 8.8E-52 377.8 33.3 373 2-409 25-433 (563)
79 PRK13388 acyl-CoA synthetase; 100.0 4.4E-47 9.6E-52 375.1 33.1 362 2-409 4-382 (540)
80 PRK03584 acetoacetyl-CoA synth 100.0 6E-47 1.3E-51 382.4 34.2 364 2-402 87-487 (655)
81 PRK06164 acyl-CoA synthetase; 100.0 8.8E-47 1.9E-51 373.7 34.6 371 1-409 10-408 (540)
82 KOG1180 Acyl-CoA synthetase [L 100.0 5.1E-47 1.1E-51 344.4 29.3 388 2-409 42-517 (678)
83 TIGR03205 pimA dicarboxylate-- 100.0 2.2E-46 4.8E-51 370.8 36.2 372 2-409 22-423 (541)
84 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.3E-46 2.7E-51 378.7 33.4 363 2-402 88-488 (652)
85 TIGR01734 D-ala-DACP-lig D-ala 100.0 7.1E-47 1.5E-51 371.3 30.4 357 2-405 1-367 (502)
86 PRK08974 long-chain-fatty-acid 100.0 3.9E-46 8.5E-51 370.5 35.6 374 2-409 24-434 (560)
87 PRK12316 peptide synthase; Pro 100.0 6.8E-47 1.5E-51 443.1 34.9 358 2-405 512-876 (5163)
88 PLN03052 acetate--CoA ligase; 100.0 2.1E-46 4.6E-51 378.8 32.5 360 2-397 175-572 (728)
89 PRK12467 peptide synthase; Pro 100.0 9.9E-47 2.1E-51 435.5 34.0 358 2-405 513-879 (3956)
90 PRK12316 peptide synthase; Pro 100.0 9.8E-47 2.1E-51 441.8 34.1 358 2-405 4552-4918(5163)
91 PRK07867 acyl-CoA synthetase; 100.0 4.2E-46 9.1E-51 367.1 33.2 360 2-409 6-383 (529)
92 PRK07008 long-chain-fatty-acid 100.0 7.7E-46 1.7E-50 366.5 34.7 370 2-409 11-411 (539)
93 PRK05691 peptide synthase; Val 100.0 2.2E-46 4.7E-51 436.1 35.3 358 2-405 3721-4091(4334)
94 PRK04813 D-alanine--poly(phosp 100.0 4.8E-46 1E-50 365.5 32.1 358 1-405 2-369 (503)
95 PRK05850 acyl-CoA synthetase; 100.0 5.5E-46 1.2E-50 370.8 32.6 362 1-405 1-422 (578)
96 PRK05620 long-chain-fatty-acid 100.0 1.3E-45 2.9E-50 367.7 35.1 365 1-401 10-406 (576)
97 PRK13390 acyl-CoA synthetase; 100.0 5E-46 1.1E-50 365.0 31.4 364 8-409 4-381 (501)
98 PRK08279 long-chain-acyl-CoA s 100.0 1E-45 2.2E-50 370.3 32.5 368 1-409 37-441 (600)
99 PLN02479 acetate-CoA ligase 100.0 6.1E-45 1.3E-49 362.1 36.0 373 1-409 20-432 (567)
100 PRK05691 peptide synthase; Val 100.0 7.8E-46 1.7E-50 431.5 33.5 356 2-405 1132-1494(4334)
101 PRK06018 putative acyl-CoA syn 100.0 4.3E-45 9.2E-50 361.6 33.5 371 1-409 10-412 (542)
102 PRK09192 acyl-CoA synthetase; 100.0 8.6E-45 1.9E-49 361.9 33.7 369 1-409 21-441 (579)
103 PRK06814 acylglycerophosphoeth 100.0 9.5E-45 2.1E-49 387.9 35.7 367 2-409 632-1012(1140)
104 PRK13391 acyl-CoA synthetase; 100.0 1.8E-44 4E-49 354.7 32.8 366 8-409 4-384 (511)
105 PRK07798 acyl-CoA synthetase; 100.0 7.3E-44 1.6E-48 352.5 35.0 367 1-405 3-401 (533)
106 PRK12406 long-chain-fatty-acid 100.0 8.1E-44 1.8E-48 350.0 34.5 357 18-409 3-381 (509)
107 PRK08162 acyl-CoA synthetase; 100.0 1.5E-43 3.2E-48 351.1 35.8 372 1-409 18-418 (545)
108 TIGR01733 AA-adenyl-dom amino 100.0 4.2E-44 9.1E-49 342.4 30.2 333 28-405 1-343 (408)
109 PRK08276 long-chain-fatty-acid 100.0 9.6E-44 2.1E-48 349.0 31.3 356 18-409 3-371 (502)
110 PRK09029 O-succinylbenzoic aci 100.0 1.7E-43 3.7E-48 343.1 31.8 331 1-409 2-334 (458)
111 PRK07768 long-chain-fatty-acid 100.0 6.6E-43 1.4E-47 346.4 33.7 366 2-409 3-416 (545)
112 PRK07445 O-succinylbenzoic aci 100.0 5.8E-42 1.2E-46 330.5 28.5 305 26-409 19-326 (452)
113 PRK07868 acyl-CoA synthetase; 100.0 1.3E-41 2.9E-46 354.7 32.5 357 1-409 447-838 (994)
114 KOG1179 Very long-chain acyl-C 100.0 1.3E-41 2.9E-46 310.4 27.1 363 2-404 78-477 (649)
115 TIGR01923 menE O-succinylbenzo 100.0 9.3E-41 2E-45 322.1 29.2 320 28-409 1-322 (436)
116 PLN03051 acyl-activating enzym 100.0 3.5E-41 7.6E-46 329.9 25.8 315 75-407 1-347 (499)
117 PTZ00297 pantothenate kinase; 100.0 6.8E-40 1.5E-44 342.6 32.5 356 2-409 428-847 (1452)
118 PRK08308 acyl-CoA synthetase; 100.0 6.5E-39 1.4E-43 306.9 31.3 289 19-388 1-289 (414)
119 KOG1175 Acyl-CoA synthetase [L 100.0 1.9E-39 4.1E-44 308.7 25.8 358 14-404 78-468 (626)
120 COG1020 EntF Non-ribosomal pep 100.0 4E-33 8.6E-38 281.7 31.1 358 2-406 228-593 (642)
121 PRK07824 O-succinylbenzoic aci 99.9 2.1E-26 4.5E-31 216.3 19.5 201 166-409 31-236 (358)
122 TIGR03089 conserved hypothetic 99.9 3.3E-26 7.1E-31 198.9 19.0 207 7-271 2-227 (227)
123 KOG3628 Predicted AMP-binding 99.9 5E-23 1.1E-27 200.7 28.6 368 2-397 771-1197(1363)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 8.3E-22 1.8E-26 188.9 18.5 200 168-388 73-281 (422)
125 TIGR02372 4_coum_CoA_lig 4-cou 99.9 4.2E-21 9.1E-26 180.1 17.0 168 170-368 95-265 (386)
126 TIGR03335 F390_ftsA coenzyme F 99.8 6.7E-20 1.5E-24 176.1 18.5 196 168-388 84-286 (445)
127 COG1541 PaaK Coenzyme F390 syn 99.7 2.7E-15 5.8E-20 138.0 17.8 199 167-387 87-293 (438)
128 KOG3628 Predicted AMP-binding 99.7 1.5E-15 3.3E-20 149.1 16.0 369 3-404 96-554 (1363)
129 KOG1178 Non-ribosomal peptide 99.6 9.7E-15 2.1E-19 147.3 12.3 311 3-345 38-370 (1032)
130 TIGR02304 aden_form_hyp probab 99.2 3.1E-10 6.7E-15 107.3 16.2 150 171-347 100-255 (430)
131 PF04443 LuxE: Acyl-protein sy 98.6 3.2E-06 6.9E-11 78.4 17.7 202 168-389 87-312 (365)
132 COG1541 PaaK Coenzyme F390 syn 95.9 0.092 2E-06 49.6 10.8 94 26-137 109-204 (438)
133 PF03321 GH3: GH3 auxin-respon 94.5 0.23 4.9E-06 49.2 9.4 77 266-342 200-308 (528)
134 PLN02620 indole-3-acetic acid- 89.9 5.4 0.00012 39.9 12.0 31 167-197 98-129 (612)
135 TIGR03335 F390_ftsA coenzyme F 87.5 6.9 0.00015 37.9 11.1 84 26-129 105-190 (445)
136 TIGR02155 PA_CoA_ligase phenyl 86.6 7.5 0.00016 37.3 10.8 88 26-131 94-183 (422)
137 KOG1177 Long chain fatty acid 85.3 14 0.00029 35.6 11.0 99 14-132 232-341 (596)
138 PRK07656 long-chain-fatty-acid 80.9 16 0.00035 35.8 10.7 86 25-131 184-271 (513)
139 PRK06334 long chain fatty acid 79.0 25 0.00054 35.0 11.4 98 14-131 181-289 (539)
140 PRK06187 long-chain-fatty-acid 76.7 23 0.00051 34.7 10.4 85 26-131 186-271 (521)
141 PRK08315 AMP-binding domain pr 75.6 34 0.00074 34.0 11.4 84 25-128 217-302 (559)
142 PRK12583 acyl-CoA synthetase; 73.4 43 0.00093 33.3 11.4 83 25-127 219-303 (558)
143 PRK04319 acetyl-CoA synthetase 72.2 34 0.00075 34.2 10.4 69 63-131 241-311 (570)
144 TIGR03590 PseG pseudaminic aci 71.5 39 0.00084 30.4 9.6 82 18-123 2-88 (279)
145 TIGR01733 AA-adenyl-dom amino 70.6 58 0.0013 30.7 11.2 88 25-132 138-228 (408)
146 TIGR01923 menE O-succinylbenzo 69.4 42 0.00091 32.0 10.1 84 25-131 129-213 (436)
147 PRK06188 acyl-CoA synthetase; 67.8 68 0.0015 31.6 11.4 85 25-130 186-270 (524)
148 PF00501 AMP-binding: AMP-bind 67.6 37 0.00079 32.2 9.2 88 168-275 8-99 (417)
149 PLN03051 acyl-activating enzym 67.4 44 0.00096 32.8 9.9 69 63-131 155-224 (499)
150 PLN02860 o-succinylbenzoate-Co 67.3 56 0.0012 32.7 10.7 97 14-131 170-276 (563)
151 TIGR03098 ligase_PEP_1 acyl-Co 66.1 53 0.0011 32.2 10.2 86 25-131 179-265 (515)
152 PRK08308 acyl-CoA synthetase; 64.9 87 0.0019 29.7 11.1 86 25-131 119-206 (414)
153 PRK06164 acyl-CoA synthetase; 64.6 68 0.0015 31.7 10.7 96 15-131 180-285 (540)
154 COG0399 WecE Predicted pyridox 64.2 39 0.00085 31.8 8.1 74 63-140 69-152 (374)
155 PRK03640 O-succinylbenzoic aci 64.1 74 0.0016 30.9 10.7 66 64-130 178-244 (483)
156 PRK09274 peptide synthase; Pro 62.1 67 0.0015 31.9 10.1 98 168-277 19-121 (552)
157 PRK13295 cyclohexanecarboxylat 62.0 1.1E+02 0.0024 30.4 11.6 85 25-130 215-301 (547)
158 PRK07470 acyl-CoA synthetase; 61.0 97 0.0021 30.5 11.0 67 64-130 202-269 (528)
159 PRK08314 long-chain-fatty-acid 60.7 99 0.0021 30.6 11.1 95 14-129 188-293 (546)
160 PRK08316 acyl-CoA synthetase; 60.1 78 0.0017 31.1 10.2 85 25-130 189-275 (523)
161 PLN02246 4-coumarate--CoA liga 59.9 89 0.0019 30.9 10.6 99 14-129 177-286 (537)
162 TIGR03089 conserved hypothetic 59.8 24 0.00053 30.6 5.7 52 63-116 173-226 (227)
163 PLN02736 long-chain acyl-CoA s 59.5 1.5E+02 0.0033 30.3 12.4 86 188-285 77-166 (651)
164 PRK13237 tyrosine phenol-lyase 59.5 1E+02 0.0022 30.0 10.1 73 63-140 112-214 (460)
165 PRK11761 cysM cysteine synthas 59.2 1.1E+02 0.0024 27.7 10.1 58 65-123 60-117 (296)
166 PLN03013 cysteine synthase 58.9 77 0.0017 30.5 9.2 60 65-124 171-230 (429)
167 PRK07638 acyl-CoA synthetase; 58.4 92 0.002 30.3 10.3 86 25-131 161-247 (487)
168 PLN02556 cysteine synthase/L-3 58.0 1.2E+02 0.0027 28.5 10.4 59 65-123 107-165 (368)
169 PLN02565 cysteine synthase 57.2 1.6E+02 0.0034 27.2 10.8 60 65-124 63-122 (322)
170 PLN03052 acetate--CoA ligase; 55.7 1.3E+02 0.0029 31.3 11.2 98 168-278 188-289 (728)
171 COG0031 CysK Cysteine synthase 55.0 1.1E+02 0.0024 27.8 9.0 58 65-123 59-116 (300)
172 PRK08043 bifunctional acyl-[ac 54.9 1.2E+02 0.0027 31.4 10.9 84 25-128 383-468 (718)
173 PRK07788 acyl-CoA synthetase; 54.9 81 0.0018 31.3 9.3 83 189-283 74-160 (549)
174 TIGR01139 cysK cysteine syntha 54.2 1.3E+02 0.0028 27.3 9.7 60 65-125 54-113 (298)
175 PRK10252 entF enterobactin syn 54.1 1.2E+02 0.0026 34.0 11.4 97 14-130 596-704 (1296)
176 PRK08633 2-acyl-glycerophospho 54.0 1.3E+02 0.0029 33.1 11.6 98 14-131 780-888 (1146)
177 TIGR01136 cysKM cysteine synth 53.9 1.4E+02 0.0029 27.2 9.8 58 66-124 56-113 (299)
178 PRK07476 eutB threonine dehydr 53.5 1.2E+02 0.0026 27.9 9.4 54 73-126 71-124 (322)
179 PRK08279 long-chain-acyl-CoA s 53.5 1.2E+02 0.0027 30.5 10.5 85 25-130 217-303 (600)
180 PF10102 DUF2341: Domain of un 52.6 14 0.00031 26.6 2.6 42 363-404 3-59 (89)
181 PLN02247 indole-3-acetic acid- 52.6 16 0.00035 36.6 3.7 29 169-197 88-117 (606)
182 PF01041 DegT_DnrJ_EryC1: DegT 52.5 55 0.0012 30.7 7.2 129 63-204 60-201 (363)
183 TIGR02370 pyl_corrinoid methyl 52.4 1.4E+02 0.0031 25.1 10.7 93 212-319 85-181 (197)
184 PF06543 Lac_bphage_repr: Lact 52.3 12 0.00026 23.0 1.7 26 306-331 22-47 (49)
185 COG0318 CaiC Acyl-CoA syntheta 52.3 1.7E+02 0.0038 29.0 11.1 98 15-130 170-279 (534)
186 KOG0025 Zn2+-binding dehydroge 52.2 49 0.0011 29.7 6.1 65 63-127 156-221 (354)
187 PLN02249 indole-3-acetic acid- 52.0 7.3 0.00016 39.1 1.3 30 167-196 97-127 (597)
188 TIGR02275 DHB_AMP_lig 2,3-dihy 51.3 1.6E+02 0.0034 29.1 10.7 96 14-130 181-288 (527)
189 PTZ00237 acetyl-CoA synthetase 51.0 1.6E+02 0.0035 30.1 10.9 78 188-277 91-172 (647)
190 PLN02654 acetate-CoA ligase 50.8 1.4E+02 0.0031 30.6 10.5 97 168-279 102-202 (666)
191 PLN03102 acyl-activating enzym 50.7 1E+02 0.0022 31.0 9.3 82 189-282 39-124 (579)
192 TIGR02262 benz_CoA_lig benzoat 50.1 1.6E+02 0.0035 28.7 10.5 66 63-128 198-265 (508)
193 PRK05857 acyl-CoA synthetase; 49.6 1.2E+02 0.0027 30.0 9.7 92 168-278 27-122 (540)
194 PRK10946 entE enterobactin syn 49.1 1.5E+02 0.0032 29.4 10.1 86 25-131 200-288 (536)
195 PRK07008 long-chain-fatty-acid 48.7 1.4E+02 0.003 29.6 9.9 68 63-130 214-282 (539)
196 PF02729 OTCace_N: Aspartate/o 48.3 1.4E+02 0.003 23.7 10.4 76 64-140 35-119 (142)
197 PLN02387 long-chain-fatty-acid 48.2 2.5E+02 0.0055 29.1 11.8 86 188-285 105-194 (696)
198 cd01563 Thr-synth_1 Threonine 47.8 1.7E+02 0.0037 26.8 9.6 58 68-126 70-127 (324)
199 KOG1176 Acyl-CoA synthetase [L 47.8 91 0.002 31.1 8.0 88 187-286 43-136 (537)
200 TIGR02188 Ac_CoA_lig_AcsA acet 47.1 2E+02 0.0044 29.1 10.9 96 168-278 70-169 (625)
201 PRK07514 malonyl-CoA synthase; 47.0 1.4E+02 0.003 29.1 9.5 84 188-283 27-114 (504)
202 PLN02614 long-chain acyl-CoA s 46.7 3.3E+02 0.0071 28.1 12.3 84 188-283 78-165 (666)
203 TIGR02379 ECA_wecE TDP-4-keto- 46.7 69 0.0015 30.2 6.9 56 63-122 66-126 (376)
204 PRK05620 long-chain-fatty-acid 46.3 1.9E+02 0.004 29.0 10.4 68 63-130 219-287 (576)
205 PRK00174 acetyl-CoA synthetase 46.2 1.9E+02 0.0041 29.4 10.6 96 168-278 80-179 (637)
206 PRK13388 acyl-CoA synthetase; 46.1 2E+02 0.0044 28.5 10.6 82 189-282 26-112 (540)
207 PRK05852 acyl-CoA synthetase; 46.0 2.5E+02 0.0053 27.7 11.1 87 25-131 194-283 (534)
208 cd00640 Trp-synth-beta_II Tryp 45.9 2E+02 0.0044 25.0 9.9 59 67-126 49-107 (244)
209 PRK03584 acetoacetyl-CoA synth 45.8 2.1E+02 0.0045 29.3 10.8 69 63-131 300-371 (655)
210 PLN02330 4-coumarate--CoA liga 45.5 1.5E+02 0.0032 29.5 9.5 82 188-281 54-139 (546)
211 PRK06381 threonine synthase; V 45.3 1.3E+02 0.0028 27.6 8.3 56 71-126 65-120 (319)
212 cd01561 CBS_like CBS_like: Thi 45.0 1.6E+02 0.0035 26.5 8.9 58 67-125 52-109 (291)
213 cd01445 TST_Repeats Thiosulfat 44.6 62 0.0014 25.5 5.3 32 63-94 90-124 (138)
214 TIGR03595 Obg_CgtA_exten Obg f 44.0 31 0.00067 23.5 3.0 33 34-74 31-63 (69)
215 PRK07529 AMP-binding domain pr 43.9 1.8E+02 0.0039 29.6 9.9 97 168-277 38-137 (632)
216 PRK06814 acylglycerophosphoeth 43.7 2.6E+02 0.0056 30.9 11.8 97 14-130 791-898 (1140)
217 TIGR03443 alpha_am_amid L-amin 42.9 1.5E+02 0.0033 33.5 10.0 85 167-253 248-335 (1389)
218 PRK06839 acyl-CoA synthetase; 42.9 1.9E+02 0.0041 28.1 9.7 84 188-283 26-114 (496)
219 TIGR01217 ac_ac_CoA_syn acetoa 42.9 2.4E+02 0.0052 28.9 10.7 94 169-278 98-195 (652)
220 PRK11706 TDP-4-oxo-6-deoxy-D-g 42.9 90 0.0019 29.4 7.1 55 63-121 66-125 (375)
221 PRK07798 acyl-CoA synthetase; 42.7 2.9E+02 0.0062 27.0 11.1 84 188-283 27-114 (533)
222 PRK13383 acyl-CoA synthetase; 42.7 1.8E+02 0.0038 28.6 9.5 83 189-283 60-146 (516)
223 PRK05605 long-chain-fatty-acid 42.4 1.7E+02 0.0037 29.2 9.5 83 189-283 57-143 (573)
224 PF02073 Peptidase_M29: Thermo 42.2 83 0.0018 30.0 6.6 47 32-93 3-51 (398)
225 PRK07787 acyl-CoA synthetase; 42.1 3E+02 0.0064 26.6 10.8 84 25-130 146-231 (471)
226 PLN02861 long-chain-fatty-acid 41.9 2.1E+02 0.0045 29.4 10.1 84 188-283 76-163 (660)
227 PRK05850 acyl-CoA synthetase; 41.8 3.3E+02 0.0071 27.2 11.4 84 188-284 34-124 (578)
228 TIGR03208 cyc_hxne_CoA_lg cycl 41.4 3.1E+02 0.0067 27.1 11.0 85 25-130 213-299 (538)
229 PRK08008 caiC putative crotono 41.2 2.7E+02 0.0059 27.2 10.6 82 189-282 37-122 (517)
230 PRK07867 acyl-CoA synthetase; 41.1 3.2E+02 0.007 27.0 11.1 84 25-129 170-255 (529)
231 PRK02261 methylaspartate mutas 40.9 1.8E+02 0.0039 22.9 7.9 55 69-123 4-62 (137)
232 TIGR00936 ahcY adenosylhomocys 40.0 1.9E+02 0.0041 27.7 8.6 67 66-132 30-102 (406)
233 PTZ00342 acyl-CoA synthetase; 39.4 3.6E+02 0.0079 28.3 11.3 117 168-312 74-208 (746)
234 PRK06155 crotonobetaine/carnit 39.3 2.6E+02 0.0057 27.7 10.2 67 63-130 216-283 (542)
235 COG0365 Acs Acyl-coenzyme A sy 39.3 2.7E+02 0.0059 27.8 9.8 97 171-283 25-126 (528)
236 PRK05851 long-chain-fatty-acid 39.2 2.6E+02 0.0056 27.6 10.1 84 25-128 170-258 (525)
237 PRK12406 long-chain-fatty-acid 38.7 2.2E+02 0.0047 27.9 9.4 85 189-285 11-99 (509)
238 PRK02261 methylaspartate mutas 38.5 2E+02 0.0042 22.7 9.4 55 213-277 6-62 (137)
239 PRK08276 long-chain-fatty-acid 38.3 2.2E+02 0.0047 27.8 9.3 83 189-283 11-97 (502)
240 COG1064 AdhP Zn-dependent alco 38.3 1.1E+02 0.0025 28.3 6.6 57 63-123 162-218 (339)
241 PLN02574 4-coumarate--CoA liga 38.2 3.6E+02 0.0078 26.8 11.0 90 25-131 216-308 (560)
242 PRK07059 Long-chain-fatty-acid 37.5 2.3E+02 0.0049 28.2 9.4 82 188-281 47-132 (557)
243 PRK06060 acyl-CoA synthetase; 37.2 2.1E+02 0.0046 29.6 9.4 80 189-280 30-113 (705)
244 COG1022 FAA1 Long-chain acyl-C 37.1 4E+02 0.0086 27.2 10.7 97 13-131 188-295 (613)
245 PRK05752 uroporphyrinogen-III 36.3 2E+02 0.0044 25.2 7.9 53 34-86 13-74 (255)
246 PRK09088 acyl-CoA synthetase; 35.5 3.1E+02 0.0068 26.5 9.9 77 189-277 22-102 (488)
247 TIGR02316 propion_prpE propion 35.1 2E+02 0.0043 29.2 8.7 95 168-277 65-163 (628)
248 PRK05677 long-chain-fatty-acid 35.0 2.6E+02 0.0057 27.8 9.4 82 188-281 48-134 (562)
249 cd06448 L-Ser-dehyd Serine deh 34.7 2.2E+02 0.0048 26.1 8.1 58 66-124 49-106 (316)
250 TIGR01734 D-ala-DACP-lig D-ala 34.6 3.3E+02 0.0071 26.5 9.9 85 25-129 159-246 (502)
251 PRK07768 long-chain-fatty-acid 34.5 3.4E+02 0.0075 26.8 10.1 85 25-129 170-260 (545)
252 cd02070 corrinoid_protein_B12- 33.8 2.9E+02 0.0063 23.3 10.9 89 213-319 85-179 (201)
253 PLN02430 long-chain-fatty-acid 33.8 5.4E+02 0.012 26.4 13.6 83 189-283 76-162 (660)
254 PRK13382 acyl-CoA synthetase; 33.5 3E+02 0.0064 27.3 9.5 83 189-283 68-154 (537)
255 PRK13391 acyl-CoA synthetase; 33.3 4.7E+02 0.01 25.5 11.0 97 168-283 10-110 (511)
256 TIGR01101 V_ATP_synt_F vacuola 33.1 2.2E+02 0.0048 21.7 7.5 67 66-137 3-82 (115)
257 PRK08162 acyl-CoA synthetase; 33.1 2.5E+02 0.0054 27.8 8.9 83 189-283 43-129 (545)
258 PRK06178 acyl-CoA synthetase; 32.9 2.7E+02 0.0058 27.8 9.1 84 189-284 58-145 (567)
259 TIGR02618 tyr_phenol_ly tyrosi 32.8 4.7E+02 0.01 25.4 10.0 73 63-140 105-207 (450)
260 cd02067 B12-binding B12 bindin 32.5 2.2E+02 0.0047 21.4 7.2 39 85-123 20-58 (119)
261 TIGR01279 DPOR_bchN light-inde 32.5 4.3E+02 0.0093 25.3 9.9 61 66-127 272-334 (407)
262 cd01562 Thr-dehyd Threonine de 32.4 2.6E+02 0.0056 25.2 8.2 54 73-126 69-122 (304)
263 PRK08751 putative long-chain f 32.2 2.9E+02 0.0064 27.4 9.3 94 168-282 38-136 (560)
264 PLN00011 cysteine synthase 32.1 3.8E+02 0.0082 24.6 9.2 59 65-124 65-124 (323)
265 PRK06018 putative acyl-CoA syn 32.0 2.6E+02 0.0057 27.6 8.8 84 188-283 38-125 (542)
266 PRK10524 prpE propionyl-CoA sy 32.0 4.4E+02 0.0096 26.7 10.6 95 168-277 66-164 (629)
267 PRK12492 long-chain-fatty-acid 31.5 2.7E+02 0.0059 27.7 8.9 80 188-279 48-132 (562)
268 cd01979 Pchlide_reductase_N Pc 31.5 4.6E+02 0.01 24.9 10.0 59 67-126 275-334 (396)
269 PF07722 Peptidase_C26: Peptid 31.2 65 0.0014 27.7 3.7 31 85-115 30-60 (217)
270 PRK13390 acyl-CoA synthetase; 31.1 5E+02 0.011 25.2 10.9 77 189-277 24-104 (501)
271 PLN02479 acetate-CoA ligase 31.1 3.6E+02 0.0077 26.9 9.6 82 189-282 45-130 (567)
272 PRK07786 long-chain-fatty-acid 30.8 5.2E+02 0.011 25.5 10.7 87 25-131 192-281 (542)
273 PRK09162 hypoxanthine-guanine 30.1 1.6E+02 0.0035 24.4 5.8 23 24-46 14-36 (181)
274 cd01449 TST_Repeat_2 Thiosulfa 30.0 1.2E+02 0.0025 22.7 4.7 31 63-93 73-103 (118)
275 PF13550 Phage-tail_3: Putativ 29.8 79 0.0017 25.4 3.9 44 33-76 108-151 (164)
276 KOG0633 Histidinol phosphate a 29.7 39 0.00085 29.7 2.0 61 63-123 105-168 (375)
277 PF00464 SHMT: Serine hydroxym 29.7 2E+02 0.0044 27.4 7.0 74 64-137 106-197 (399)
278 PTZ00216 acyl-CoA synthetase; 29.4 4.6E+02 0.01 27.1 10.3 88 186-285 118-209 (700)
279 PRK06087 short chain acyl-CoA 29.3 5.6E+02 0.012 25.2 11.0 62 63-125 223-286 (547)
280 PRK11493 sseA 3-mercaptopyruva 29.3 1E+02 0.0022 27.7 4.9 52 26-94 201-257 (281)
281 cd07050 BMC_EutL_repeat2 ethan 29.3 1.3E+02 0.0029 21.1 4.1 34 63-96 10-43 (87)
282 PF00818 Ice_nucleation: Ice n 29.1 26 0.00056 16.1 0.5 9 334-342 1-9 (16)
283 PRK11658 UDP-4-amino-4-deoxy-L 28.7 2.4E+02 0.0051 26.6 7.4 54 63-120 68-126 (379)
284 TIGR03588 PseC UDP-4-keto-6-de 28.4 2.6E+02 0.0057 26.2 7.7 56 63-121 64-127 (380)
285 PF08967 DUF1884: Domain of un 27.9 8.8 0.00019 26.8 -1.7 68 31-131 9-76 (85)
286 PF13580 SIS_2: SIS domain; PD 27.7 1.6E+02 0.0035 23.0 5.2 55 28-98 80-136 (138)
287 PRK15407 lipopolysaccharide bi 27.7 4.3E+02 0.0093 25.6 9.1 70 64-137 107-186 (438)
288 PRK02842 light-independent pro 27.6 5.6E+02 0.012 24.7 10.1 58 66-123 288-346 (427)
289 cd06447 D-Ser-dehyd D-Serine d 27.5 3.3E+02 0.0072 26.1 8.0 58 71-128 136-193 (404)
290 PRK06145 acyl-CoA synthetase; 27.4 5.8E+02 0.012 24.7 11.1 67 63-130 185-253 (497)
291 PRK10717 cysteine synthase A; 27.3 4.7E+02 0.01 24.1 9.0 59 65-124 61-119 (330)
292 COG1167 ARO8 Transcriptional r 27.3 1.5E+02 0.0032 28.9 5.9 59 65-124 176-235 (459)
293 PRK12476 putative fatty-acid-- 27.2 6.6E+02 0.014 25.3 12.1 102 168-283 47-156 (612)
294 KOG0023 Alcohol dehydrogenase, 27.1 3.4E+02 0.0073 25.1 7.4 69 63-134 177-245 (360)
295 cd00615 Orn_deC_like Ornithine 27.1 2.5E+02 0.0055 25.2 7.1 56 64-122 95-161 (294)
296 COG1167 ARO8 Transcriptional r 27.0 2.5E+02 0.0055 27.3 7.4 58 208-280 176-237 (459)
297 COG2236 Predicted phosphoribos 27.0 1E+02 0.0022 26.0 4.0 23 24-46 4-26 (192)
298 TIGR01127 ilvA_1Cterm threonin 26.6 4.2E+02 0.0091 25.0 8.7 55 72-126 51-105 (380)
299 PF01276 OKR_DC_1: Orn/Lys/Arg 26.5 4.1E+02 0.0088 25.6 8.4 59 64-125 102-179 (417)
300 PRK06710 long-chain-fatty-acid 26.4 3.2E+02 0.007 27.1 8.4 80 189-280 49-132 (563)
301 PRK05928 hemD uroporphyrinogen 26.3 2.9E+02 0.0062 23.8 7.2 25 63-87 48-72 (249)
302 COG5012 Predicted cobalamin bi 26.1 2.9E+02 0.0063 23.9 6.5 85 222-322 117-204 (227)
303 cd01519 RHOD_HSP67B2 Member of 26.0 2E+02 0.0044 20.8 5.3 31 64-94 62-92 (106)
304 PRK06382 threonine dehydratase 25.8 5.3E+02 0.011 24.6 9.3 55 73-127 77-131 (406)
305 PRK07276 DNA polymerase III su 25.8 5.1E+02 0.011 23.5 8.7 45 66-115 131-175 (290)
306 PRK07048 serine/threonine dehy 25.7 4.4E+02 0.0096 24.1 8.5 53 73-125 76-128 (321)
307 PRK12582 acyl-CoA synthetase; 25.0 3.2E+02 0.0069 27.8 8.1 77 188-276 79-164 (624)
308 PRK10696 tRNA 2-thiocytidine b 24.8 4.8E+02 0.01 23.0 10.0 59 64-122 25-94 (258)
309 PRK08197 threonine synthase; V 24.6 5.6E+02 0.012 24.3 9.2 55 71-126 129-184 (394)
310 COG4006 Uncharacterized protei 24.4 4.3E+02 0.0094 23.0 7.2 54 28-95 125-180 (278)
311 PF09153 DUF1938: Domain of un 24.4 2.2E+02 0.0047 20.2 4.5 31 18-48 16-53 (86)
312 PRK08180 feruloyl-CoA synthase 24.3 7.5E+02 0.016 25.0 10.7 100 14-131 207-320 (614)
313 PRK08974 long-chain-fatty-acid 24.3 4E+02 0.0086 26.5 8.6 81 189-281 48-133 (560)
314 TIGR03531 selenium_SpcS O-phos 24.2 6.7E+02 0.015 24.4 10.0 70 67-139 150-237 (444)
315 PRK09029 O-succinylbenzoic aci 24.1 3.8E+02 0.0082 25.7 8.2 77 189-276 28-107 (458)
316 PRK09192 acyl-CoA synthetase; 24.1 5.5E+02 0.012 25.6 9.6 86 187-284 47-143 (579)
317 TIGR01747 diampropi_NH3ly diam 24.1 3.7E+02 0.0079 25.5 7.7 59 69-127 94-152 (376)
318 PF01297 TroA: Periplasmic sol 23.8 2.8E+02 0.0061 24.3 6.6 76 70-146 151-231 (256)
319 TIGR02035 D_Ser_am_lyase D-ser 23.8 4E+02 0.0087 25.8 7.9 59 71-129 154-212 (431)
320 KOG1794 N-Acetylglucosamine ki 23.6 1.8E+02 0.004 26.2 5.0 85 302-387 68-155 (336)
321 PF11974 MG1: Alpha-2-macroglo 23.5 72 0.0016 23.4 2.3 32 356-387 23-59 (97)
322 PLN02723 3-mercaptopyruvate su 23.1 1.5E+02 0.0033 27.2 4.9 32 63-94 264-295 (320)
323 TIGR01137 cysta_beta cystathio 23.0 5.6E+02 0.012 24.7 9.1 57 66-123 60-116 (454)
324 PRK06721 threonine synthase; R 23.0 5.7E+02 0.012 23.8 8.7 57 71-127 77-134 (352)
325 PRK05638 threonine synthase; V 22.9 3.7E+02 0.0081 26.0 7.7 57 72-129 115-172 (442)
326 PF06277 EutA: Ethanolamine ut 22.8 7.2E+02 0.016 24.3 9.2 53 15-85 372-425 (473)
327 cd01019 ZnuA Zinc binding prot 22.7 5.3E+02 0.011 23.2 8.2 70 69-138 179-252 (286)
328 cd02071 MM_CoA_mut_B12_BD meth 22.7 3.5E+02 0.0075 20.6 8.1 39 85-123 20-58 (122)
329 PRK05939 hypothetical protein; 22.6 4.4E+02 0.0096 25.1 8.0 56 65-122 83-138 (397)
330 PRK08329 threonine synthase; V 22.6 6.3E+02 0.014 23.5 10.1 53 74-126 109-161 (347)
331 PRK04813 D-alanine--poly(phosp 22.4 7E+02 0.015 24.1 9.8 85 25-129 161-248 (503)
332 PRK04870 histidinol-phosphate 22.0 3.1E+02 0.0067 25.4 6.9 53 66-121 103-159 (356)
333 PF00291 PALP: Pyridoxal-phosp 22.0 5.3E+02 0.011 23.1 8.3 56 68-124 56-111 (306)
334 COG0604 Qor NADPH:quinone redu 21.9 6.3E+02 0.014 23.2 8.9 68 63-134 138-208 (326)
335 KOG2531 Sugar (pentulose and h 21.3 1.1E+02 0.0025 29.3 3.5 38 302-340 441-478 (545)
336 cd06454 KBL_like KBL_like; thi 21.2 4.9E+02 0.011 23.7 8.1 54 65-122 82-139 (349)
337 PRK14807 histidinol-phosphate 21.1 2.6E+02 0.0057 25.8 6.2 54 65-121 97-154 (351)
338 TIGR01138 cysM cysteine syntha 21.1 6.2E+02 0.013 22.8 12.6 58 65-123 56-113 (290)
339 PRK02991 D-serine dehydratase; 21.0 5E+02 0.011 25.2 8.0 57 72-128 160-216 (441)
340 PLN02409 serine--glyoxylate am 20.9 5.1E+02 0.011 24.6 8.2 58 64-122 80-144 (401)
341 KOG1250 Threonine/serine dehyd 20.8 7.5E+02 0.016 23.7 8.7 55 70-126 117-171 (457)
342 cd00401 AdoHcyase S-adenosyl-L 20.6 6.3E+02 0.014 24.3 8.5 55 66-120 34-90 (413)
343 PF05221 AdoHcyase: S-adenosyl 20.6 3.4E+02 0.0073 24.2 6.1 56 65-120 40-97 (268)
344 PRK09224 threonine dehydratase 20.4 7.6E+02 0.016 24.5 9.3 56 72-127 71-126 (504)
345 PLN02356 phosphateglycerate ki 20.3 6.8E+02 0.015 24.2 8.6 56 66-122 102-157 (423)
346 PRK06702 O-acetylhomoserine am 20.1 5.2E+02 0.011 25.0 8.0 56 65-122 97-154 (432)
347 PRK12483 threonine dehydratase 20.1 7.8E+02 0.017 24.6 9.3 56 73-128 89-144 (521)
348 PRK14057 epimerase; Provisiona 20.1 4.3E+02 0.0093 23.4 6.7 55 68-122 99-163 (254)
No 1
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.2e-57 Score=435.82 Aligned_cols=369 Identities=25% Similarity=0.372 Sum_probs=294.8
Q ss_pred hHHHHHHHhcccCCCeeEEEe----CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 2 EVFKAAYKKGSMARDSVAIRA----DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
++.+.+.++++.+|+.+|+.. ..+.+||+|+.+++.++|++|++. |+..||+|+|++.|
T Consensus 17 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~l-----------------g~~~gdrvai~a~n 79 (613)
T COG1022 17 TLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSL-----------------GIPAGDRVAIFAAN 79 (613)
T ss_pred cHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhc-----------------CCCCCCEEEEEeCC
Confidence 467889999999999999985 458999999999999999999994 88779999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH-HHHHHHHhhccCCcee---ccC---C-----
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-REVLQNVASKSGAKFS---LIP---P----- 145 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~---~~~---~----- 145 (409)
+++|+++.+||+.+|++.||++++.+++++.++|+.++++++|++.+. .+.+..+......... ... .
T Consensus 80 r~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (613)
T COG1022 80 RPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAK 159 (613)
T ss_pred CHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchh
Confidence 999999999999999999999999999999999999999999999854 4444444432111000 000 0
Q ss_pred ---CCCCCC-Ccc---ccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc-cCCCCeEEEe
Q 015313 146 ---VPNVSS-ETT---VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHC 217 (409)
Q Consensus 146 ---~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~l~~ 217 (409)
...... ... ..............++|.|.|+|||||||.||||++||+|+++++......+. .+++|+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~Lsf 239 (613)
T COG1022 160 ALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSF 239 (613)
T ss_pred hccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEe
Confidence 000000 000 01111111223567899999999999999999999999999999999999997 9999999999
Q ss_pred cCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhh----hhHH
Q 015313 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA----MDTE 293 (409)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~----~~~~ 293 (409)
+|+.|++.+.......+..| +......++..+++. +.+++||.++++|.+|+.+.+.... .+..
T Consensus 240 LPlaHi~Er~~~~~~~~~~g--~~~~~~~~~~~~~~d----------l~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~ 307 (613)
T COG1022 240 LPLAHIFERAFEGGLALYGG--VTVLFKEDPRTLLED----------LKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAV 307 (613)
T ss_pred CcHHHHHHHHHHHHHHhhcc--eEEEecCCHHHHHHH----------HHHhCCeEEeechHHHHHHHHHHHHHHHhcchh
Confidence 99999999965433333344 444445588888888 6779999999999999988775331 1100
Q ss_pred H------------------------------------HHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCcccccccc
Q 015313 294 L------------------------------------QAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGM 337 (409)
Q Consensus 294 ~------------------------------------~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~ 337 (409)
. ...+.....++|++++||+++++++...++.. |+++.++||+
T Consensus 308 ~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGl 386 (613)
T COG1022 308 RRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGL 386 (613)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecc
Confidence 0 11122334699999999999999998877776 8999999999
Q ss_pred ccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCcccchh--hcccC
Q 015313 338 TEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 338 tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
||++..++..+......+++|+|+|++++||+|+ |||+||||++|+|||++|++|+++ .||||
T Consensus 387 TEts~~~~v~~~~~~~~gtvG~p~p~~evKI~d~---------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf 451 (613)
T COG1022 387 TETSAVVSVNPPDRFVLGTVGKPLPGIEVKIADD---------GEILVRGPNVMKGYYKNPEATAEAFTEDGWF 451 (613)
T ss_pred cccccceEEccccCcccCCcCCcCCCceEEEccC---------ceEEEecchhcchhcCChHHHhhhccccCCc
Confidence 9999888877777889999999999999999996 999999999999999999999999 58998
No 2
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-57 Score=434.06 Aligned_cols=364 Identities=28% Similarity=0.418 Sum_probs=309.1
Q ss_pred cCCCe-eEEEeCC---ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHH
Q 015313 13 MARDS-VAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGT 88 (409)
Q Consensus 13 ~~~~~-~a~~~~~---~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~ 88 (409)
.++++ +.+++.. +.+||+|+++++.++|.+|.+.| +|+++||+|++++||+++++++++||
T Consensus 28 ~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~---------------~~i~~gDvV~i~~pNs~~~~~~~la~ 92 (537)
T KOG1176|consen 28 VYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELG---------------LGIKKGDVVGILAPNTPEFVELALAV 92 (537)
T ss_pred ccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcC---------------CCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 34444 6666644 99999999999999999999864 26899999999999999999999999
Q ss_pred HhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCcc-------cccc---
Q 015313 89 WFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETT-------VFDQ--- 158 (409)
Q Consensus 89 ~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--- 158 (409)
+++|+++.+++|.+++.++.+.++.++++++++|.+..+.+..........++.+........... ....
T Consensus 93 ~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (537)
T KOG1176|consen 93 PMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPE 172 (537)
T ss_pred HHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhcccc
Confidence 999999999999999999999999999999999999999998887765544444433211110000 0000
Q ss_pred chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCC
Q 015313 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (409)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~ 238 (409)
...........+|++.+.|||||||.||||++||++++...........+...|+.++.+|++|..|++..+.+.+..|+
T Consensus 173 ~~~~~~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~ 252 (537)
T KOG1176|consen 173 GLPDGIRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGT 252 (537)
T ss_pred CCCcccccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCc
Confidence 00000234456999999999999999999999999999988887777788889999999999999999886666888888
Q ss_pred EEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 239 TVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 239 ~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
++++.+.|++..++.. +++|++|+++++|.++..|++.. ....++++++|.+.+||++++++
T Consensus 253 ~ii~~~~f~~~~~~~~----------i~kykvt~~~~vP~~~~~l~~~p--------~~~~~~l~sl~~v~~gga~~~~~ 314 (537)
T KOG1176|consen 253 TIICLRKFDAELFLDL----------IEKYKVTHLFLVPPVLNMLAKSP--------IVKKYDLSSLRSVLSGGAPLSPA 314 (537)
T ss_pred eEEECCCCCHHHHHHH----------HHHhCEEEEEcChHHHHHHhcCC--------ccCcccCCccEEEEecCCCCCHH
Confidence 8888899999999999 89999999999999999999863 24557899999999999999999
Q ss_pred HHHHHHHHhC-CccccccccccccccccccCCCC-CCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhc
Q 015313 319 VMQQWETITG-HRLLERYGMTEFVMAISNPLRGA-RKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (409)
Q Consensus 319 ~~~~~~~~~~-~~v~~~YG~tE~g~~~~~~~~~~-~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~ 395 (409)
+.+++.+.++ ..+.++||+||++++++.+.... .+++++|.++++++.+|.++.|+..+++ .||||+||+++++|||
T Consensus 315 ~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg~~imkGY~ 394 (537)
T KOG1176|consen 315 TLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRGPQVMKGYL 394 (537)
T ss_pred HHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCceEEEEECcccchhhc
Confidence 9999999998 89999999999997766554444 5899999999999999999999998777 8999999999999999
Q ss_pred CCCcccchhhc--ccC
Q 015313 396 KLPKESRTLSS--CLY 409 (409)
Q Consensus 396 ~~~~~t~~~~~--g~~ 409 (409)
|||++|++.++ |||
T Consensus 395 ~NpeaT~~~~~~~GW~ 410 (537)
T KOG1176|consen 395 KNPEATKEAFDDDGWF 410 (537)
T ss_pred CChHHHHhhcccCCcc
Confidence 99999998833 998
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-56 Score=439.38 Aligned_cols=373 Identities=28% Similarity=0.447 Sum_probs=309.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCcc--ccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKS--YSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~--~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~ 78 (409)
+++.+.|.+.++.+|+++|+++.+.. +||+||.++++++|..|++. |+++||+|+|+++|+
T Consensus 11 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~-----------------~v~~gdrVail~~N~ 73 (534)
T COG0318 11 LTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQAL-----------------GVKPGDRVAILLPNS 73 (534)
T ss_pred ccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCC
Confidence 46889999999999999999998877 99999999999999999995 799999999999999
Q ss_pred HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCC----CCcc
Q 015313 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS----SETT 154 (409)
Q Consensus 79 ~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 154 (409)
++++++++||+++|++++|+++.++..++.++++.++++.++++.+..+.+..................... ....
T Consensus 74 ~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (534)
T COG0318 74 PEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEA 153 (534)
T ss_pred HHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHH
Confidence 999999999999999999999999999999999999999999998855555555443321111111111100 0001
Q ss_pred ccccc--hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc--cCCCCeEEEecCchhHHHHHHHH
Q 015313 155 VFDQS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (409)
Q Consensus 155 ~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~g~~~~~ 230 (409)
..... ........+++++++++|||||||.||+|.+||+++..+.......+. +++.|++++++|++|.+|+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~ 233 (534)
T COG0318 154 LAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGL 233 (534)
T ss_pred HhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHH
Confidence 10000 000111156899999999999999999999999999999988888888 89999999999999999998877
Q ss_pred HHHHhcCCEEEEcc--CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhc-cceE
Q 015313 231 LAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRL 307 (409)
Q Consensus 231 ~~~l~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~-~lr~ 307 (409)
...+..|+++++.+ .+++...+.. +.++++|++.++|+++..++++.... ..+++ ++|.
T Consensus 234 ~~~~~~G~~~v~~~~~~f~~~~~~~~----------i~~~~~t~~~~vPt~~~~ll~~~~~~--------~~~~~~~lr~ 295 (534)
T COG0318 234 LAPLLGGGTLVLLSPEPFDPEEVLWL----------IEKYKVTVLSGVPTFLRELLDNPEKD--------DDDLSSSLRL 295 (534)
T ss_pred HHHHHcCCEEEeCCCCCcCHHHHHHH----------HHHhcceEEecchHHHHHHHhCCccC--------ccccccceEE
Confidence 88899999999998 5899999888 67788999999999999998874432 22344 4999
Q ss_pred EEeeCCCCCHHHHHHHHHHhC-CccccccccccccccccccCCCC--CCccccccccCCeEEEEeeCCCC-CCCCc-cce
Q 015313 308 MMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESG-SDAAG-VGE 382 (409)
Q Consensus 308 v~~gG~~~~~~~~~~~~~~~~-~~v~~~YG~tE~g~~~~~~~~~~--~~~~~~G~p~~~~~~~ivd~~~~-~~~~~-~Ge 382 (409)
++.||+++++++++++.+.++ .++++.||+||++..++...... ...+++|.|+|+++++|+|++++ +.| | +||
T Consensus 296 ~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGe 374 (534)
T COG0318 296 VLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGE 374 (534)
T ss_pred EEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceE
Confidence 999999999999999999997 57999999999986655444333 46778899999999999998886 445 6 899
Q ss_pred EEEeCcchhhhhcCCCcccchhhc--ccC
Q 015313 383 ICVKSPSLFKEYWKLPKESRTLSS--CLY 409 (409)
Q Consensus 383 l~v~g~~~~~gY~~~~~~t~~~~~--g~~ 409 (409)
|+++||+++.||||+|+.|++.++ |||
T Consensus 375 i~irgp~v~~GY~~~pe~t~~~f~~~gW~ 403 (534)
T COG0318 375 IWVRGPNVMKGYWNRPEATAEAFDEDGWL 403 (534)
T ss_pred EEEECchhhhhhcCChHHHHHhhccCCee
Confidence 999999999999999999999865 897
No 4
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-56 Score=447.63 Aligned_cols=382 Identities=17% Similarity=0.270 Sum_probs=298.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeC-----CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCC--------
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG-------- 68 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~-----~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g-------- 68 (409)
++.+.|.++++++||++|+++. .+++||+||.+++.++|++|.+.. .+|+++|
T Consensus 62 ~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~--------------~~Gv~~g~~~~~~~~ 127 (746)
T PTZ00342 62 HIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYE--------------GKGIPEKKYNEEQNN 127 (746)
T ss_pred hHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHh--------------hcCCCcCcccccccc
Confidence 5789999999999999999973 268999999999999999999720 0278888
Q ss_pred ---CEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC-c-eecc
Q 015313 69 ---ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-K-FSLI 143 (409)
Q Consensus 69 ---~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~-~~~~ 143 (409)
|+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++.+..+.+......... + ++.+
T Consensus 128 g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~ 207 (746)
T PTZ00342 128 GKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIIL 207 (746)
T ss_pred ccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999998877776665444332 1 2222
Q ss_pred CCCCCCC-----------------CCc------------------------c-----------ccc-------------c
Q 015313 144 PPVPNVS-----------------SET------------------------T-----------VFD-------------Q 158 (409)
Q Consensus 144 ~~~~~~~-----------------~~~------------------------~-----------~~~-------------~ 158 (409)
....... ... . ... .
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 287 (746)
T PTZ00342 208 DTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDD 287 (746)
T ss_pred CCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHH
Confidence 2110000 000 0 000 0
Q ss_pred -----chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc--ccCCCCeEEEecCchhHHHHHHHHH
Q 015313 159 -----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALL 231 (409)
Q Consensus 159 -----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~g~~~~~~ 231 (409)
..........++|+++|+|||||||.||||++||+++++.+....... .....|++++.+|++|++++.. .+
T Consensus 288 ~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~~ 366 (746)
T PTZ00342 288 MTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-AY 366 (746)
T ss_pred HHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-HH
Confidence 000011234678999999999999999999999999998876654332 2335689999999999999965 67
Q ss_pred HHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh----hHH--------------
Q 015313 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM----DTE-------------- 293 (409)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~----~~~-------------- 293 (409)
.++..|+++++.+. ++..+++. +++++||+++++|.+++.|.+..... +..
T Consensus 367 ~~l~~G~~i~~~~~-~~~~l~~d----------i~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 435 (746)
T PTZ00342 367 LSFMLGGTINIWSK-DINYFSKD----------IYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKS 435 (746)
T ss_pred HHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 78999999999875 78888888 77899999999999999997642211 100
Q ss_pred ----------------HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCcccc
Q 015313 294 ----------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTV 357 (409)
Q Consensus 294 ----------------~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~ 357 (409)
....+....++||.+++||+++++++.++|+..+|++++++||+||+++.++.........+++
T Consensus 436 ~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsv 515 (746)
T PTZ00342 436 NNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESI 515 (746)
T ss_pred hhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCCCCCcccc
Confidence 0111122347999999999999999999999999999999999999976555433344577899
Q ss_pred cccc-CCeEEEEeeCCC-CCCCCc-cceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 358 GNPL-PGVQVKIAEDES-GSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 358 G~p~-~~~~~~ivd~~~-~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
|.|+ |+++++|+|.++ .....+ .|||++|||+++.|||++|++|++++ ||||
T Consensus 516 G~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~ 572 (746)
T PTZ00342 516 GGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYF 572 (746)
T ss_pred cCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcc
Confidence 9998 999999998443 333233 69999999999999999999999995 8998
No 5
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-55 Score=391.35 Aligned_cols=373 Identities=20% Similarity=0.272 Sum_probs=313.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeC--CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.++..+++.||+.|.+++ +..+||+||.+.++++|+.|++ +|+++||+|++..||+.
T Consensus 51 Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-----------------lGL~kGDrVgvwgpN~~ 113 (596)
T KOG1177|consen 51 TIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-----------------LGLKKGDRVGVWGPNSY 113 (596)
T ss_pred cHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-----------------hcCCCCCEEEEecCChH
Confidence 5778999999999999999984 5679999999999999999999 59999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH-----HHHHHHHhhccCC-------------cee
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA-------------KFS 141 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~-------------~~~ 141 (409)
+|+..++||.++|.+.+++||.+...++++.|++.+.+++|..+.+ ...+.++..+... ...
T Consensus 114 ~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lth 193 (596)
T KOG1177|consen 114 EWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTH 193 (596)
T ss_pred HHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceE
Confidence 9999999999999999999999999999999999999999998753 3445554333210 011
Q ss_pred -ccCCCCCCCCCcccccc----c-------hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccC
Q 015313 142 -LIPPVPNVSSETTVFDQ----S-------QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (409)
Q Consensus 142 -~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 209 (409)
++...+.........++ . .+.......+||++.|.|||||||.|||+.+||.+++++........++.
T Consensus 194 vi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~ 273 (596)
T KOG1177|consen 194 VILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYN 273 (596)
T ss_pred EEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcC
Confidence 11111111111111000 0 00112235679999999999999999999999999999999999999999
Q ss_pred CCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc-cCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhh
Q 015313 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (409)
Q Consensus 210 ~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~ 288 (409)
+++++++..|++|.+|+..+.+++|..|+|++++ +.|++.+.+++ ++++++|.++++|+|+..+++.
T Consensus 274 e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqa----------i~~ekcT~l~gtPtM~~Dlln~-- 341 (596)
T KOG1177|consen 274 EKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQA----------ISNEKCTTLYGTPTMFVDLLNI-- 341 (596)
T ss_pred cceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHH----------HHhhceEEEecChHHHHHHhcc--
Confidence 9999999999999999989999999999999995 56999999999 8889999999999999999986
Q ss_pred hhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCC-ccccccccccccccccc---cCCCCCCccccccccCCe
Q 015313 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISN---PLRGARKAGTVGNPLPGV 364 (409)
Q Consensus 289 ~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~---~~~~~~~~~~~G~p~~~~ 364 (409)
+.....+++++|..+.||+++++++++.+.+.... .+...||+||++.+.+. .+.......++|..+++.
T Consensus 342 ------~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~ 415 (596)
T KOG1177|consen 342 ------PQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHY 415 (596)
T ss_pred ------hhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccc
Confidence 34466789999999999999999999999987765 56678999999965553 333345677899999999
Q ss_pred EEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh--hcccC
Q 015313 365 QVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 365 ~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
+.+|+|.+|..++-| .||||+||++.+.|||++++.|++. .|-||
T Consensus 416 Ea~iv~~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~ 463 (596)
T KOG1177|consen 416 EAAIVDKDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWY 463 (596)
T ss_pred ccccccCCCCccccCCCceEEEEechhheeecCCcccchhhcccccce
Confidence 999999999999999 7999999999999999999999999 88997
No 6
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.3e-54 Score=437.23 Aligned_cols=379 Identities=25% Similarity=0.327 Sum_probs=300.2
Q ss_pred hHHHHHHHhcccCCCeeEEEe----CC-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 2 EVFKAAYKKGSMARDSVAIRA----DQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~----~~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
++.+.|++.++.+||++|+.+ ++ +.+||+||.++++++|++|++ +|+++||+|+
T Consensus 45 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 107 (651)
T PLN02736 45 TLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-----------------HGIPKGACVG 107 (651)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEE
Confidence 578899999999999999942 21 469999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC-ceeccCCCCCC--
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPNV-- 149 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-- 149 (409)
|+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++.+..+.+......... ..++.......
T Consensus 108 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 187 (651)
T PLN02736 108 LYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPL 187 (651)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhh
Confidence 999999999999999999999999999999999999999999999999998877766655443332 22111110000
Q ss_pred ---CC--C---ccccccc-----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEE
Q 015313 150 ---SS--E---TTVFDQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLH 216 (409)
Q Consensus 150 ---~~--~---~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~ 216 (409)
.. . ....+.. .........++++++|+|||||||.||||++||++++..+......+++.++|++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~ 267 (651)
T PLN02736 188 PSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHIS 267 (651)
T ss_pred hhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEE
Confidence 00 0 0000000 001112345789999999999999999999999999999988888888899999999
Q ss_pred ecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHH---
Q 015313 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE--- 293 (409)
Q Consensus 217 ~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~--- 293 (409)
.+|++|.++++ .++.++..|+++++.+. ++..+++. ++++++|+++++|.+++.+.+.....-..
T Consensus 268 ~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 335 (651)
T PLN02736 268 YLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDD----------LAALRPTIFCSVPRLYNRIYDGITNAVKESGG 335 (651)
T ss_pred eCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEecchHHHHHHHHHHHHHHhcccH
Confidence 99999999996 47888999999998775 77778877 78899999999999999887653210000
Q ss_pred -------------------------------HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccc
Q 015313 294 -------------------------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVM 342 (409)
Q Consensus 294 -------------------------------~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~ 342 (409)
....+....+++|.+++||+++++++.+++++.+|+++++.||+||+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~ 415 (651)
T PLN02736 336 LKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSC 415 (651)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhch
Confidence 0000111125899999999999999999999989999999999999987
Q ss_pred cccccCCCCCCccccccccCCeEEEEeeCCC-C---CCCC-ccceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 343 AISNPLRGARKAGTVGNPLPGVQVKIAEDES-G---SDAA-GVGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 343 ~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~-~---~~~~-~~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
.++.........+++|+|+|+++++|+|.++ . .... ..|||+++||+++.|||++|++|++.+ ||||
T Consensus 416 ~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~ 489 (651)
T PLN02736 416 VISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWL 489 (651)
T ss_pred heeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCe
Confidence 6554433445678999999999999999432 2 1222 269999999999999999999999985 7998
No 7
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-54 Score=436.26 Aligned_cols=378 Identities=21% Similarity=0.282 Sum_probs=289.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeC----C-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
++.+.|.+.++.+||++|+.+. + +++||+||+++++++|++|.+ +|+++||+|+
T Consensus 46 t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~Gd~Va 108 (666)
T PLN02614 46 SCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-----------------VGVKDEAKCG 108 (666)
T ss_pred cHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 6789999999999999999841 1 258999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC--Cc-eeccCCCCCC
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AK-FSLIPPVPNV 149 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 149 (409)
|+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++.+....+........ .. ++.+......
T Consensus 109 i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~ 188 (666)
T PLN02614 109 IYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSRE 188 (666)
T ss_pred EEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChH
Confidence 99999999999999999999999999999999999999999999999999876544432221110 11 1111110000
Q ss_pred ----C--CC---cccccc-----chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc-----ccCC
Q 015313 150 ----S--SE---TTVFDQ-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-----EYTS 210 (409)
Q Consensus 150 ----~--~~---~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-----~~~~ 210 (409)
. .. ....+. ..........++|+++|+|||||||.||||.+||++++..+......+ .++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 268 (666)
T PLN02614 189 QKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTV 268 (666)
T ss_pred HhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCC
Confidence 0 00 000000 000011223578999999999999999999999999998777655443 4678
Q ss_pred CCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 211 ~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
+|++++.+|++|.+++.. .+..+..|+++++.+ +++..+++. +++++||+++++|.+++.+.+.....
T Consensus 269 ~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~ 336 (666)
T PLN02614 269 KDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-GDVKLLIED----------LGELKPTIFCAVPRVLDRVYSGLQKK 336 (666)
T ss_pred CcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCeEEEecHHHHHHHHHHHHHH
Confidence 899999999999999864 566788999998876 488888888 78899999999999999987643210
Q ss_pred hHH-------------------------------------HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHh-CCccc
Q 015313 291 DTE-------------------------------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLL 332 (409)
Q Consensus 291 ~~~-------------------------------------~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~ 332 (409)
... .........++||.+++||+++++++ ++|.+.+ +++++
T Consensus 337 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~ 415 (666)
T PLN02614 337 LSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVL 415 (666)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEE
Confidence 000 00000111268999999999999875 5676766 58999
Q ss_pred cccccccccccccc-cCCCCCCccccccccCCeEEEEee-CC--CCCCCCc-cceEEEeCcchhhhhcCCCcccchh-hc
Q 015313 333 ERYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAE-DE--SGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SS 406 (409)
Q Consensus 333 ~~YG~tE~g~~~~~-~~~~~~~~~~~G~p~~~~~~~ivd-~~--~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~ 406 (409)
+.||+||+++..+. .+......+++|+|+|+++++|+| ++ +++++.| .|||+||||+++.|||++|++|++. .|
T Consensus 416 ~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~d 495 (666)
T PLN02614 416 QGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLID 495 (666)
T ss_pred eeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhcc
Confidence 99999998754432 222234578999999999999998 33 3566666 8999999999999999999999998 58
Q ss_pred ccC
Q 015313 407 CLY 409 (409)
Q Consensus 407 g~~ 409 (409)
|||
T Consensus 496 Gw~ 498 (666)
T PLN02614 496 GWL 498 (666)
T ss_pred CCc
Confidence 998
No 8
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=9.3e-55 Score=412.29 Aligned_cols=365 Identities=23% Similarity=0.324 Sum_probs=295.6
Q ss_pred HHHhcc-cCCCeeEEEeCC-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 7 AYKKGS-MARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 7 l~~~~~-~~~~~~a~~~~~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+.++.. ..+|+.|+++.+ +.+||+||++.+.++|+.|++. .|+ +||||+|++|+.+|
T Consensus 15 ~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~----------------~gv-kGDrV~iymp~~pe 77 (528)
T COG0365 15 LDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDL----------------GGV-KGDRVAIYMPNSPE 77 (528)
T ss_pred hhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHh----------------CCC-CCCEEEEEcCCCHH
Confidence 445544 247899999853 6799999999999999999975 478 99999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhc-----cCCceeccCCCCCCCCCccc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK-----SGAKFSLIPPVPNVSSETTV 155 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 155 (409)
.++++|||+++|++.+|+.+.++++.+...+++++++++|+++......+..... .....++..... ....+.
T Consensus 78 ~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~--~~~~~~ 155 (528)
T COG0365 78 AVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG--LWYDEA 155 (528)
T ss_pred HHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc--ccHHHH
Confidence 9999999999999999999999999999999999999999988665433321110 000011111111 101111
Q ss_pred c-ccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHH-hhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 015313 156 F-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (409)
Q Consensus 156 ~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~ 233 (409)
. ...........+.+|+++++|||||||+||+|+++|..++....... ..+.+.++|++.+..++.|+.|+++.++.+
T Consensus 156 ~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~p 235 (528)
T COG0365 156 VEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSP 235 (528)
T ss_pred hhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHH
Confidence 1 11111122336789999999999999999999999997776665544 467788999999999999999999999999
Q ss_pred HhcCCEEEEccCc---chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEe
Q 015313 234 LYAGATVEFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (409)
Q Consensus 234 l~~G~~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~ 310 (409)
|..|+|.++.+.. ++..+++. +++|++|.++++|+.++.|.+.-. ....++|+||.+.+
T Consensus 236 L~~Gat~~~~eg~p~~~~~~~~~~----------ie~~~vt~~~tsPT~~R~l~~~g~--------~~~~dlssLr~~~S 297 (528)
T COG0365 236 LASGATTVLYDGRPFYSPERLWEA----------LEKYKVTIFGTSPTFLRRLMKLGL--------GEPYDLSSLRVLGS 297 (528)
T ss_pred HhcCCeEEEeCCCCCCCHHHHHHH----------HHHhCCceEeeCHHHHHHHHhcCC--------cccccchhheeeec
Confidence 9999999998753 37888888 888999999999999999988621 45678999999999
Q ss_pred eCCCCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCc--
Q 015313 311 GSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSP-- 388 (409)
Q Consensus 311 gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~-- 388 (409)
.|||++++.++.+.+.+|+++.+.||+||+|++...... +.+.++.|+|+||+++.|+|++|++++.+.|+|+++.|
T Consensus 298 aGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~G~Lvi~~~~p 376 (528)
T COG0365 298 AGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKNGSSGLPLPGYAVRRVDDEGNPVPPGVGELVVRLPWP 376 (528)
T ss_pred cCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCCCCCCCCCCCceeEEECCCCCcCCCCceEEEEeCCCc
Confidence 999999999999999999999999999999955554333 44556669999999999999999988876699999987
Q ss_pred chhhhhcCCCcccchh-hcccC
Q 015313 389 SLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+++.+|||||+++.+. ++.||
T Consensus 377 ~~~~~~w~d~er~~~~y~~~~y 398 (528)
T COG0365 377 GMALTYWNDPERYKEAYFGRWY 398 (528)
T ss_pred hhhhhhhCCHHHHHHHHhhcee
Confidence 9999999999999998 44365
No 9
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3e-53 Score=426.94 Aligned_cols=378 Identities=22% Similarity=0.288 Sum_probs=287.8
Q ss_pred hHHHHHHHhcccCCCeeEEEe----C---C--ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 2 EVFKAAYKKGSMARDSVAIRA----D---Q--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~----~---~--~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
++.+.|.+.++++|+++|+.. + + +++||+||.++++++|++|.+ +|+++||+|+
T Consensus 44 t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 106 (660)
T PLN02861 44 SPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-----------------RGVNPGDRCG 106 (660)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 577899999999999999964 1 1 479999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC--Cce-eccCCCCCC
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKF-SLIPPVPNV 149 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~ 149 (409)
|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++++..+.+........ ... +.+......
T Consensus 107 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 186 (660)
T PLN02861 107 IYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSE 186 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChh
Confidence 99999999999999999999999999999999999999999999999998876655544333221 111 111111000
Q ss_pred ------------CCCcccccc-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc-----cCCC
Q 015313 150 ------------SSETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-----YTSA 211 (409)
Q Consensus 150 ------------~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~ 211 (409)
......... ..........++|+++|+|||||||.||||.+||++++..+......+. +..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02861 187 QKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEE 266 (660)
T ss_pred hhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCC
Confidence 000000000 0001122345789999999999999999999999999988776655443 4678
Q ss_pred CeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhh
Q 015313 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (409)
Q Consensus 212 d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~ 291 (409)
|++++.+|++|.+++.. .+.+++.|+++++.+ +++..+++. +++++||+++++|.+++.+.+.....-
T Consensus 267 d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~~ 334 (660)
T PLN02861 267 DSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMED----------VQALKPTIFCGVPRVYDRIYTGIMQKI 334 (660)
T ss_pred CEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCcEEeechHHHHHHHHHHHHHH
Confidence 99999999999999865 555799999999874 578888888 788999999999999998875321100
Q ss_pred --------------------------------HH-----HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCC-cccc
Q 015313 292 --------------------------------TE-----LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLE 333 (409)
Q Consensus 292 --------------------------------~~-----~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~-~v~~ 333 (409)
.. ....+....+++|.+++||+++++++. +|.+.++. .+++
T Consensus 335 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~ 413 (660)
T PLN02861 335 SSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQ 413 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeE
Confidence 00 000011112689999999999999975 56666764 7999
Q ss_pred ccccccccccccc-cCCCCCCccccccccCCeEEEEee--CCCC-CCCCc-cceEEEeCcchhhhhcCCCcccchh-hcc
Q 015313 334 RYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAE--DESG-SDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSC 407 (409)
Q Consensus 334 ~YG~tE~g~~~~~-~~~~~~~~~~~G~p~~~~~~~ivd--~~~~-~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g 407 (409)
.||+||+++.++. ........+++|+|+|+++++|+| ++|. ....+ .|||++|||+++.||||+|++|++. .||
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dG 493 (660)
T PLN02861 414 GYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDG 493 (660)
T ss_pred ecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhhcc
Confidence 9999998765443 222233568999999999999998 3342 22333 7999999999999999999999998 589
Q ss_pred cC
Q 015313 408 LY 409 (409)
Q Consensus 408 ~~ 409 (409)
||
T Consensus 494 w~ 495 (660)
T PLN02861 494 WF 495 (660)
T ss_pred Cc
Confidence 98
No 10
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5.2e-54 Score=412.07 Aligned_cols=370 Identities=30% Similarity=0.470 Sum_probs=291.8
Q ss_pred HHHhcccCCCeeEEEe-CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHH
Q 015313 7 AYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (409)
Q Consensus 7 l~~~~~~~~~~~a~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~ 85 (409)
|+++++++||++|+++ .++++||+||+++++++|..|.+ +|+++|++|+|+++|++++++++
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~-----------------~g~~~~~~V~i~~~n~~~~~~~~ 63 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRK-----------------LGVKKGDRVAILLPNSIEFVVAF 63 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHH-----------------TTSSTTSEEEEEESSSHHHHHHH
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHH-----------------hCCCccccccccCCccceeeeee
Confidence 6789999999999999 99999999999999999999998 59999999999999999999999
Q ss_pred HHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEe----chhHHHHHHHHhhccCCc-eeccCCCCCCCCCccccccc-
Q 015313 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS----TEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQS- 159 (409)
Q Consensus 86 ~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 159 (409)
+||+++|++++|+++.++.+++.+++++++++++|+ +......+.......... ....................
T Consensus 64 ~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (417)
T PF00501_consen 64 LACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASL 143 (417)
T ss_dssp HHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999996 333333333333322211 11111111111100000000
Q ss_pred hhhhccC-CCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHH--hhcccCCCCeEEEecCchhHHHHHHHHHHHHhc
Q 015313 160 QAEKMDG-QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYA 236 (409)
Q Consensus 160 ~~~~~~~-~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~ 236 (409)
....... ..++++++++|||||||.||+|.++|+++++.+..+. ...+++ |++++.+|++|..|++..++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~ 221 (417)
T PF00501_consen 144 SDEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFS 221 (417)
T ss_dssp CHCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHC
T ss_pred ccccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccc
Confidence 0000000 0568999999999999999999999999999887764 222233 6999999999999996779999999
Q ss_pred CCEEEEccCcch---HHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCC
Q 015313 237 GATVEFMPKFSV---RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (409)
Q Consensus 237 G~~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~ 313 (409)
|+++++++.... +.+++. ++++++|+++++|.+++.+++..+.. . .....+++++|.+++||+
T Consensus 222 G~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~~~~-~---~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 222 GATLVLPSPFDLFDPESLLEL----------ISRYKPTILFAVPSMLEALLQSPEEK-T---KISKKDLSSLRTVISGGE 287 (417)
T ss_dssp TSEEEEESSHHHHHHHHHHHH----------HHHHTESEEEEEHHHHHHHHHHHHTT-H---HGTTTTGTT-SEEEEESS
T ss_pred cccccccccccccccccchhc----------cccccccccccccccccccccccccc-c---cccccccccccccccccc
Confidence 999999998654 445666 78899999999999999998742111 0 112347888999999999
Q ss_pred CCCHHHHHHHHHHhCC-cccccccccccccccccc--CCCCCCccccccccCCeEEEEeeCC-CCCCCCc-cceEEEeCc
Q 015313 314 ALPLPVMQQWETITGH-RLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSP 388 (409)
Q Consensus 314 ~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~~--~~~~~~~~~~G~p~~~~~~~ivd~~-~~~~~~~-~Gel~v~g~ 388 (409)
++++++.+++++.++. ++++.||+||++.+++.. .......+++|.|+|+++++|+|++ +++++.| .|||+++||
T Consensus 288 ~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~ 367 (417)
T PF00501_consen 288 PLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGP 367 (417)
T ss_dssp T-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEEST
T ss_pred cCChhhccccccccccccceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 9999999999999987 999999999999887744 3333577889999999999999998 7788777 899999999
Q ss_pred chhhhhcCCCcccchhhc--ccC
Q 015313 389 SLFKEYWKLPKESRTLSS--CLY 409 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~~~--g~~ 409 (409)
+++.||+++|++|++.++ |||
T Consensus 368 ~~~~gy~~~~~~~~~~~~~~~~~ 390 (417)
T PF00501_consen 368 NVFSGYYNDPELTAEAFIDDGWY 390 (417)
T ss_dssp TSBSEETTBHHHHHHHEETTSEE
T ss_pred ccceeeeccccccccccccccce
Confidence 999999999999999954 787
No 11
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-53 Score=402.22 Aligned_cols=379 Identities=24% Similarity=0.365 Sum_probs=296.6
Q ss_pred ChHHHHHHHhcccCCCeeEEEe--------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 1 MEVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~--------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
+++.+.|.+.+..+|+.+++-. ..+++||+|.++++..++..|++ +|+++++.|+
T Consensus 75 ~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-----------------lG~~~~~~VG 137 (691)
T KOG1256|consen 75 LTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-----------------LGVKEDSKVG 137 (691)
T ss_pred ccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCceEE
Confidence 4678999999999999999865 23799999999999999999998 5999999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEec-hhHHHHHHHHhhc--cC-Cceec-cCCCC
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST-EDYREVLQNVASK--SG-AKFSL-IPPVP 147 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~-~~~~~~~~~~~~~--~~-~~~~~-~~~~~ 147 (409)
|+..|++||++..+||...|+++||++.+++++.+.+|++.+.++++|+| ++.+..+.+.... .. .+.++ +....
T Consensus 138 Iy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~ 217 (691)
T KOG1256|consen 138 IYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPS 217 (691)
T ss_pred EeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999 5555554443332 21 22222 21111
Q ss_pred CC-CC-----------Ccccccc--chhhhc-cCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHH---Hhhc---
Q 015313 148 NV-SS-----------ETTVFDQ--SQAEKM-DGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML---TEAW--- 206 (409)
Q Consensus 148 ~~-~~-----------~~~~~~~--~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~--- 206 (409)
.. .. +.+..+. ...... ..+.++|.+.|+|||||||.||||.+||+|++..+... ....
T Consensus 218 ~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~ 297 (691)
T KOG1256|consen 218 DELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAK 297 (691)
T ss_pred hhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccccc
Confidence 10 00 0111111 111222 46789999999999999999999999999999865532 2211
Q ss_pred ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHh
Q 015313 207 EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQG 286 (409)
Q Consensus 207 ~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~ 286 (409)
.....|.+++++||+|++..+...+ .+..|+.+.+..+ |+..+.+. +++.+||.+.++|.+|+++.+.
T Consensus 298 ~~~~~dv~lSyLPLAHi~er~~~~~-~~~~G~~IgF~~g-D~~~l~~d----------lk~lkPT~f~~VPRVl~riye~ 365 (691)
T KOG1256|consen 298 ATVGDDVYLSYLPLAHIFERVVELY-TFYIGAKIGFARG-DILKLTDD----------LKELKPTVFPGVPRVLERIYEG 365 (691)
T ss_pred ccccCceEEEeCcHHHHHHHHHHHh-HhhcccEEEEecC-ChHHHHHH----------HHHhCCcEEeccHhHHHHHHHH
Confidence 2223699999999999999977444 4689999999986 77777777 6678999999999999998876
Q ss_pred hhhhhHHHH-------------------------------------HHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCC
Q 015313 287 YEAMDTELQ-------------------------------------AASASAAKQLRLMMCGSSALPLPVMQQWETITGH 329 (409)
Q Consensus 287 ~~~~~~~~~-------------------------------------~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~ 329 (409)
......... ..+......+|.+++|++|+++++.+.++.++|+
T Consensus 366 I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~ 445 (691)
T KOG1256|consen 366 IQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGC 445 (691)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCc
Confidence 542111110 0112224589999999999999999999999999
Q ss_pred cccccccccccc-ccccccCCCCCCccccccccCCeEEEEeeCCC-CCCCCc-cceEEEeCcchhhhhcCCCcccchh--
Q 015313 330 RLLERYGMTEFV-MAISNPLRGARKAGTVGNPLPGVQVKIAEDES-GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-- 404 (409)
Q Consensus 330 ~v~~~YG~tE~g-~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~-~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-- 404 (409)
+|+++||+||+. +..+..+.+. ..+++|.|.|++++|++|... +-.+.+ .|||||||+++|+|||+||+.|+++
T Consensus 446 ~v~eGYGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~id 524 (691)
T KOG1256|consen 446 RVLEGYGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAID 524 (691)
T ss_pred eeeecccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhc
Confidence 999999999998 4555554444 899999999999999999443 334444 6999999999999999999999999
Q ss_pred hcccC
Q 015313 405 SSCLY 409 (409)
Q Consensus 405 ~~g~~ 409 (409)
.|||+
T Consensus 525 eDGWL 529 (691)
T KOG1256|consen 525 EDGWL 529 (691)
T ss_pred ccccc
Confidence 79996
No 12
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.8e-53 Score=417.55 Aligned_cols=372 Identities=21% Similarity=0.266 Sum_probs=306.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.+.++.+||++|++++.+.+||+||.++++++|+.|.+. |+++||+|+++++|++++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~-----------------gi~~gd~V~i~~~n~~~~ 112 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLAL-----------------GVRAGDGVAVLARNHRGF 112 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCCCHHH
Confidence 467889999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceec-cCCCCCC---CCCccccc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSL-IPPVPNV---SSETTVFD 157 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~ 157 (409)
+++++||+++|++++|+++.++.+++.+++++++++++|++++....+..+.......... ....... .......+
T Consensus 113 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (549)
T PRK07788 113 VLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDD 192 (549)
T ss_pred HHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHH
Confidence 9999999999999999999999999999999999999999988777665543322211111 1000000 00000000
Q ss_pred cc--hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHh
Q 015313 158 QS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLY 235 (409)
Q Consensus 158 ~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~ 235 (409)
.. ..........++.++++|||||||.||+|.++|+++...+......+++..+|+++...|++|..|+. .++.++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l~ 271 (549)
T PRK07788 193 LIAGSSTAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAMA 271 (549)
T ss_pred HhcCCCCCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHHH
Confidence 00 00011122356789999999999999999999999999888888888888999999999999999985 4777899
Q ss_pred cCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCC
Q 015313 236 AGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSAL 315 (409)
Q Consensus 236 ~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~ 315 (409)
.|+++++...+++..+++. ++++++|++.++|+++..+++.... .....++++||.+++||+++
T Consensus 272 ~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~gG~~l 335 (549)
T PRK07788 272 LGSTVVLRRRFDPEATLED----------IAKHKATALVVVPVMLSRILDLGPE------VLAKYDTSSLKIIFVSGSAL 335 (549)
T ss_pred hCCEEEECCCCCHHHHHHH----------HHHhCCcEEEEHHHHHHHHHhCccc------ccCCCCCCceeEEEEeCCCC
Confidence 9999999988999999988 7789999999999999999875321 01234578999999999999
Q ss_pred CHHHHHHHHHHhCCccccccccccccccccccCC-CCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhh
Q 015313 316 PLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKE 393 (409)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~-~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~g 393 (409)
++++.+++.+.+++++++.||+||+++.+..... .....+++|+|+++++++|+|+++++++.| .|||+++|++++.|
T Consensus 336 ~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~g 415 (549)
T PRK07788 336 SPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGNGFPFEG 415 (549)
T ss_pred CHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeCCCcccc
Confidence 9999999999999999999999999865543322 234567899999999999999999998888 89999999999999
Q ss_pred hcCCCcccchhhcccC
Q 015313 394 YWKLPKESRTLSSCLY 409 (409)
Q Consensus 394 Y~~~~~~t~~~~~g~~ 409 (409)
|+++++. +..||||
T Consensus 416 Y~~~~~~--~~~~g~~ 429 (549)
T PRK07788 416 YTDGRDK--QIIDGLL 429 (549)
T ss_pred ccCCCcc--cccCCce
Confidence 9999886 4578997
No 13
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.1e-52 Score=424.55 Aligned_cols=380 Identities=22% Similarity=0.291 Sum_probs=289.4
Q ss_pred hHHHHHHHhcccCCCeeEEEe------------CC-----------ccccHHHHHHHHHHHHHHHhhCCCCccccccccc
Q 015313 2 EVFKAAYKKGSMARDSVAIRA------------DQ-----------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~------------~~-----------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~ 58 (409)
|+.+.|.+.++.+||++|+.+ ++ +++||+||.++++++|+.|.+
T Consensus 59 t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------- 125 (696)
T PLN02387 59 TLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA------------- 125 (696)
T ss_pred CHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-------------
Confidence 578999999999999999943 11 238999999999999999999
Q ss_pred ccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC
Q 015313 59 NSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA 138 (409)
Q Consensus 59 ~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~ 138 (409)
+|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.++++.++++++|++.+....+..+......
T Consensus 126 ----lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~ 201 (696)
T PLN02387 126 ----LGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET 201 (696)
T ss_pred ----hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC
Confidence 5999999999999999999999999999999999999999999999999999999999998877766665444331
Q ss_pred -c-eeccCCCCCCCC-------Cc---cccc-----cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHH
Q 015313 139 -K-FSLIPPVPNVSS-------ET---TVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM 201 (409)
Q Consensus 139 -~-~~~~~~~~~~~~-------~~---~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~ 201 (409)
. ++.+........ .. ...+ ...........++|+++|+|||||||.||||++||++++..+..
T Consensus 202 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~ 281 (696)
T PLN02387 202 VKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAG 281 (696)
T ss_pred ceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHH
Confidence 1 122211110000 00 0000 00001112345789999999999999999999999999988877
Q ss_pred HHhhc-ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchH--------HHHHHHHhhcCCCCCCcccccee
Q 015313 202 LTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVR--------GIWQRWRESYPVNGNRAGEAITA 272 (409)
Q Consensus 202 ~~~~~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~vt~ 272 (409)
....+ .+.++|++++.+|++|.+++.. .+..+..|+++.+....... ..+.. +++++||+
T Consensus 282 ~~~~~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~----------i~~~~pT~ 350 (696)
T PLN02387 282 VMTVVPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGD----------ASALKPTL 350 (696)
T ss_pred HHhhcCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhh----------HHHhCCcE
Confidence 66553 5788999999999999999865 45567788888775542211 12223 77799999
Q ss_pred eecchHHHHHHHHhhhhhhHH---------------------------------------HHHHhhhhhccceEEEeeCC
Q 015313 273 FTGVPTMYTRLIQGYEAMDTE---------------------------------------LQAASASAAKQLRLMMCGSS 313 (409)
Q Consensus 273 ~~~~P~~l~~l~~~~~~~~~~---------------------------------------~~~~~~~~~~~lr~v~~gG~ 313 (409)
++++|.+++.+.+........ ....+....+++|.+++||+
T Consensus 351 ~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGa 430 (696)
T PLN02387 351 MTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGA 430 (696)
T ss_pred EEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCC
Confidence 999999999997653211000 00011112268999999999
Q ss_pred CCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEee-CCCCCC---CCc-cceEEEeCc
Q 015313 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE-DESGSD---AAG-VGEICVKSP 388 (409)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~~~~~---~~~-~Gel~v~g~ 388 (409)
++++++.+.++..+|++++++||+||+++.++.........+++|+|+|+++++|+| ++++.. .++ .|||+||||
T Consensus 431 pl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp 510 (696)
T PLN02387 431 PLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGP 510 (696)
T ss_pred CCCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccC
Confidence 999999888887889999999999999865543333344678999999999999999 454322 222 699999999
Q ss_pred chhhhhcCCCcccchhh--c--c--cC
Q 015313 389 SLFKEYWKLPKESRTLS--S--C--LY 409 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~~--~--g--~~ 409 (409)
++++|||++|++|++++ | | ||
T Consensus 511 ~v~~GY~~~pe~T~~~f~~d~~G~~W~ 537 (696)
T PLN02387 511 SVTLGYFKNQEKTDEVYKVDERGMRWF 537 (696)
T ss_pred cccchhcCCHHHHhhhhccccCCCcee
Confidence 99999999999999986 3 5 97
No 14
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.5e-52 Score=413.56 Aligned_cols=370 Identities=21% Similarity=0.260 Sum_probs=299.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
++.+.|.+.++++|+++|+.+.. .++||+||.++++++|+.|.+ .+||+|+|+++|+++
T Consensus 20 ~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~--------------------~~gd~Val~~~n~~e 79 (539)
T PRK06334 20 TVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK--------------------YPDQHIGIMMPASAG 79 (539)
T ss_pred cHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh--------------------ccCCeEEEEcCCchH
Confidence 57889999999999999998765 799999999999999999976 379999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhc---cCCceeccCCCCCC-CCCccc-
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK---SGAKFSLIPPVPNV-SSETTV- 155 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~- 155 (409)
++++++||+++|++++|+++..+.+++.++++.+++++++++.+....+.+.... .....+.+...... ......
T Consensus 80 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 159 (539)
T PRK06334 80 AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCR 159 (539)
T ss_pred HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhh
Confidence 9999999999999999999999999999999999999999998877665544321 11111111110000 000000
Q ss_pred ----cccch-----hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHH
Q 015313 156 ----FDQSQ-----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (409)
Q Consensus 156 ----~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 226 (409)
..... ........++++++|+|||||||.||+|.++|+++..........++.+.+|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 239 (539)
T PRK06334 160 IGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGF 239 (539)
T ss_pred hhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhh
Confidence 00000 001123467899999999999999999999999999888877777888899999999999999998
Q ss_pred HHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccc
Q 015313 227 FNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (409)
Q Consensus 227 ~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~l 305 (409)
...++.++..|+++++.. .+++..+++. ++++++|++.++|.+++.+++... ....++++|
T Consensus 240 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l 301 (539)
T PRK06334 240 NSCTLFPLLSGVPVVFAYNPLYPKKIVEM----------IDEAKVTFLGSTPVFFDYILKTAK--------KQESCLPSL 301 (539)
T ss_pred HHHHHHHHHcCCeEEEecCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHHhhh--------hcccccccc
Confidence 766788999999999875 4788888888 788999999999999999987522 223467899
Q ss_pred eEEEeeCCCCCHHHHHHHHHHh-CCcccccccccccccccccc-CCCCCCccccccccCCeEEEEeeCC-CCCCCCc-cc
Q 015313 306 RLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VG 381 (409)
Q Consensus 306 r~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~-~~~~~~~~~~G~p~~~~~~~ivd~~-~~~~~~~-~G 381 (409)
|.+++||+++++++.+++.+.+ ++.+++.||+||++.+++.. .......+++|+|+++++++|+|++ +++++.| .|
T Consensus 302 r~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~G 381 (539)
T PRK06334 302 RFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETG 381 (539)
T ss_pred cEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceE
Confidence 9999999999999999999998 68999999999998665433 2223345679999999999999965 5778887 89
Q ss_pred eEEEeCcchhhhhcCCCcccchh---hcccC
Q 015313 382 EICVKSPSLFKEYWKLPKESRTL---SSCLY 409 (409)
Q Consensus 382 el~v~g~~~~~gY~~~~~~t~~~---~~g~~ 409 (409)
||+++|++++.|||++|+.+... .+|||
T Consensus 382 el~v~g~~~~~GY~~~~~~~~~~~~~~~~w~ 412 (539)
T PRK06334 382 LVLTRGTSLFSGYLGEDFGQGFVELGGETWY 412 (539)
T ss_pred EEEEecCcccccccCCcccccceeeCCceeE
Confidence 99999999999999999977644 26787
No 15
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.5e-52 Score=417.20 Aligned_cols=370 Identities=21% Similarity=0.294 Sum_probs=289.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeC-----CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~-----~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
++.+.|.++++++||++|+++. .+++||+||.++++++|++|.+. |+++||+|+++++
T Consensus 40 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-----------------Gv~~gd~Vai~~~ 102 (614)
T PRK08180 40 RLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDR-----------------GLSAERPLMILSG 102 (614)
T ss_pred cHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEecC
Confidence 6788999999999999999874 26899999999999999999994 8999999999999
Q ss_pred CCHHHHHHHHHHHhhCcEEEeCCCCCC-----hHHHHHHHhcCCceEEEechh--HHHHHHHHhhccCCceeccCCCCCC
Q 015313 77 PSFEFVAGVLGTWFSGCIAVPLALSYP-----ESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPVPNV 149 (409)
Q Consensus 77 ~~~~~~~~~~A~~~~G~~~~~i~~~~~-----~~~~~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (409)
|+++++++++||+++|++++|+++.++ .+++.++++.++++++|++.. ....+..... .....+........
T Consensus 103 n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 181 (614)
T PRK08180 103 NSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP-ADVEVVAVRGAVPG 181 (614)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc-CCceEEEecCCCCC
Confidence 999999999999999999999999988 789999999999999999854 2222222111 11111111110000
Q ss_pred ---CCCccccccc----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccC--CCCeEEEecCc
Q 015313 150 ---SSETTVFDQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT--SADQFLHCLPL 220 (409)
Q Consensus 150 ---~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl 220 (409)
.......... .........++++++|+|||||||.||+|.+||+++...+......+... ..+++++.+|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl 261 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPW 261 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecch
Confidence 0000000000 00111223568999999999999999999999999998888776666653 56899999999
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEccC-cchH---HHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHH
Q 015313 221 HHVHGLFNALLAPLYAGATVEFMPK-FSVR---GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (409)
Q Consensus 221 ~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~---~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~ 296 (409)
+|..+++..++.++..|+++++.+. +++. .+++. ++++++|+++++|.++..|++.++..+ .
T Consensus 262 ~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~~----~ 327 (614)
T PRK08180 262 NHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRN----------LREISPTVYFNVPKGWEMLVPALERDA----A 327 (614)
T ss_pred HHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHH----------HHHhCCcEEechHHHHHHHHHHHHhch----h
Confidence 9999987778889999999999763 4444 34444 778999999999999999987643211 2
Q ss_pred HhhhhhccceEEEeeCCCCCHHHHHHHHHH----hC--CccccccccccccccccccCCCCCCccccccccCCeEEEEee
Q 015313 297 ASASAAKQLRLMMCGSSALPLPVMQQWETI----TG--HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE 370 (409)
Q Consensus 297 ~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~----~~--~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd 370 (409)
....++++||.+++||+++++++.+++.+. +| +++++.||+||++.+++.........+++|+|+|+++++|+|
T Consensus 328 ~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d 407 (614)
T PRK08180 328 LRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVP 407 (614)
T ss_pred hhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEec
Confidence 233467899999999999999999999875 33 688999999999866554333345678999999999999998
Q ss_pred CCCCCCCCccceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 371 DESGSDAAGVGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 371 ~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
+++ .|||+++||+++.|||++|+.|++.+ ||||
T Consensus 408 ~~~------~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~ 442 (614)
T PRK08180 408 VGG------KLEVRVKGPNVTPGYWRAPELTAEAFDEEGYY 442 (614)
T ss_pred CCC------CcEEEEecCccchhhcCChhHhHhhcccCCce
Confidence 643 49999999999999999999999986 7998
No 16
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-52 Score=422.44 Aligned_cols=383 Identities=23% Similarity=0.335 Sum_probs=289.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeC---------------------------CccccHHHHHHHHHHHHHHHhhCCCCccccc
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD---------------------------QKSYSYDQLASSALRISSLLCSNDLKTTSEK 54 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~---------------------------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~ 54 (409)
++.+.|.++++.+||++|+.+. .+++||+||.++++++|+.|.+
T Consensus 70 t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~--------- 140 (700)
T PTZ00216 70 NFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE--------- 140 (700)
T ss_pred CHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH---------
Confidence 5789999999999999999872 4789999999999999999999
Q ss_pred ccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhh
Q 015313 55 TKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (409)
Q Consensus 55 ~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (409)
+|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+.....
T Consensus 141 --------~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~ 212 (700)
T PTZ00216 141 --------LGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMK 212 (700)
T ss_pred --------hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhh
Confidence 499999999999999999999999999999999999999999999999999999999999876654443322
Q ss_pred cc--C-CceeccCCCCCCCC--------Ccccc-----ccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHH
Q 015313 135 KS--G-AKFSLIPPVPNVSS--------ETTVF-----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ 198 (409)
Q Consensus 135 ~~--~-~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~ 198 (409)
.. . ...+.+........ ..... ............++|+++|+|||||||.||||++||+++++.
T Consensus 213 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 213 SGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred hccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 11 1 12222211110000 00000 000001112345789999999999999999999999999988
Q ss_pred HHHHHhhc-----ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceee
Q 015313 199 VQMLTEAW-----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273 (409)
Q Consensus 199 ~~~~~~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~ 273 (409)
+......+ ...++|++++.+|++|.+++.. ....+..|+++++. ++..+.+.+.. ....+++++||++
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~---~~~~l~~~~pT~~ 365 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFAR---PHGDLTEFRPVFL 365 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhcc---ccchHHHcCCcEE
Confidence 87765443 2367899999999999999854 55567888887763 34444432110 0011677999999
Q ss_pred ecchHHHHHHHHhhhhhhHH---------------------------------HHHHhhhhhccceEEEeeCCCCCHHHH
Q 015313 274 TGVPTMYTRLIQGYEAMDTE---------------------------------LQAASASAAKQLRLMMCGSSALPLPVM 320 (409)
Q Consensus 274 ~~~P~~l~~l~~~~~~~~~~---------------------------------~~~~~~~~~~~lr~v~~gG~~~~~~~~ 320 (409)
.++|.+++.+.+........ +...+....+++|.+++||+++++++.
T Consensus 366 ~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~ 445 (700)
T PTZ00216 366 IGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQ 445 (700)
T ss_pred EechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99999999987653211100 000111122689999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCC--CCCc-cceEEEeCcchhhhhcCC
Q 015313 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS--DAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 321 ~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~--~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
+.++..++ +++++||+||+++..+.........+++|+|+|+++++|+|.++.. .+++ .|||+|+||+++.|||++
T Consensus 446 ~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~ 524 (700)
T PTZ00216 446 EFVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQ 524 (700)
T ss_pred HHHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCC
Confidence 88887778 9999999999986655433344567899999999999999987632 3334 799999999999999999
Q ss_pred Ccccchhh--cccC
Q 015313 398 PKESRTLS--SCLY 409 (409)
Q Consensus 398 ~~~t~~~~--~g~~ 409 (409)
|++|++.+ ||||
T Consensus 525 pe~T~~~f~~dGw~ 538 (700)
T PTZ00216 525 EELTREVLDEDGWF 538 (700)
T ss_pred hhHhhhhccccCCe
Confidence 99999985 7997
No 17
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=9e-52 Score=409.65 Aligned_cols=373 Identities=22% Similarity=0.320 Sum_probs=307.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC------ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEe
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~ 75 (409)
++.+.|.+.++.+|+++|+++.. +.+||+||+++++++|++|.+. |+++||+|++++
T Consensus 25 ~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~Val~~ 87 (547)
T PRK13295 25 TINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARL-----------------GVGRGDVVSCQL 87 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEC
Confidence 67889999999999999999865 8999999999999999999994 899999999999
Q ss_pred CCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH-----HHHHHHHhhccC-CceeccCCCCCC
Q 015313 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSG-AKFSLIPPVPNV 149 (409)
Q Consensus 76 ~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~ 149 (409)
+|+++++++++|++++|++++|+++..+.+++.++++.++++++++++++ .+.+.++..... ............
T Consensus 88 ~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (547)
T PRK13295 88 PNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGA 167 (547)
T ss_pred CCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCc
Confidence 99999999999999999999999999999999999999999999998754 222222222221 111111110000
Q ss_pred CCCccc---------cccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCc
Q 015313 150 SSETTV---------FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPL 220 (409)
Q Consensus 150 ~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl 220 (409)
...... .............++++++++|||||||.||+|.++|+++...+......+++.++|++++..|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~ 247 (547)
T PRK13295 168 DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPM 247 (547)
T ss_pred cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCc
Confidence 000000 00000001122356899999999999999999999999999988888888889999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhh
Q 015313 221 HHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASAS 300 (409)
Q Consensus 221 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~ 300 (409)
+|..+++..++.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+.... ...
T Consensus 248 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~~--------~~~ 309 (547)
T PRK13295 248 AHQTGFMYGLMMPVMLGATAVLQDIWDPARAAEL----------IRTEGVTFTMASTPFLTDLTRAVKE--------SGR 309 (547)
T ss_pred hhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHH----------HHHcCCcEEEecHHHHHHHHhcccc--------cCC
Confidence 9999988889999999999999998899999988 7889999999999999999875321 234
Q ss_pred hhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC--CCCccccccccCCeEEEEeeCCCCCCCC
Q 015313 301 AAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAA 378 (409)
Q Consensus 301 ~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~--~~~~~~~G~p~~~~~~~ivd~~~~~~~~ 378 (409)
.++++|.+++||+++++++.+++.+.+++++++.||+||++.+....... .....++|+|+++++++|+|+++++++.
T Consensus 310 ~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~ 389 (547)
T PRK13295 310 PVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPA 389 (547)
T ss_pred CcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCC
Confidence 57889999999999999999999999999999999999998765443321 2335678999999999999999998888
Q ss_pred c-cceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 379 G-VGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 379 ~-~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
| .|||+++|++++.||+++|+.|++..||||
T Consensus 390 g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 421 (547)
T PRK13295 390 GQIGRLQVRGCSNFGGYLKRPQLNGTDADGWF 421 (547)
T ss_pred CCCCeEEEEcCcccccccCCccccccCCCCCe
Confidence 7 899999999999999999999998899998
No 18
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=7.3e-52 Score=417.25 Aligned_cols=375 Identities=19% Similarity=0.271 Sum_probs=295.2
Q ss_pred hH-HHHHHHhcc-cCCCeeEEEeC------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEE
Q 015313 2 EV-FKAAYKKGS-MARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGI 73 (409)
Q Consensus 2 ~~-~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l 73 (409)
|+ ...|.+++. .+|+++|+++. .+++||+||.+++.++|+.|++ +|+++||+|+|
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i 150 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-----------------VGVKKGDAVVI 150 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEE
Confidence 44 345556665 48999999873 3689999999999999999999 49999999999
Q ss_pred EeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHH---------HHHHHhhcc---CC--c
Q 015313 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE---------VLQNVASKS---GA--K 139 (409)
Q Consensus 74 ~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~---~~--~ 139 (409)
+++|++++++++|||+++|++++|+++.++.+++..++++++++++|+++.... .+....... .. .
T Consensus 151 ~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 230 (666)
T PLN02654 151 YLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVG 230 (666)
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCcc
Confidence 999999999999999999999999999999999999999999999999876431 122211110 00 0
Q ss_pred -eeccCCCCCC---C-CCc---c--ccccch----hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHH-HHHHHHh
Q 015313 140 -FSLIPPVPNV---S-SET---T--VFDQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTE 204 (409)
Q Consensus 140 -~~~~~~~~~~---~-~~~---~--~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~ 204 (409)
.......... . ... . ..+... ........++++++|+|||||||.||||+++|++++. .......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~ 310 (666)
T PLN02654 231 ICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKY 310 (666)
T ss_pred EEEEecccccccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHH
Confidence 0000100000 0 000 0 000000 0011124678999999999999999999999999864 3445566
Q ss_pred hcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHH
Q 015313 205 AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (409)
Q Consensus 205 ~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l 280 (409)
.++++++|++++..|++|..++...++.+|+.|+++++.++ +++..+++. ++++++|+++++|+++
T Consensus 311 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~ 380 (666)
T PLN02654 311 AFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDI----------VDKYKVTIFYTAPTLV 380 (666)
T ss_pred hcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHH
Confidence 77889999999999999999987778899999999999874 467888888 8889999999999999
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC---CccccccccccccccccccCC--CCCCcc
Q 015313 281 TRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAG 355 (409)
Q Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~---~~v~~~YG~tE~g~~~~~~~~--~~~~~~ 355 (409)
+.|.+.... .....++++||.++++|+++++++.+++.+.+| +++.+.||+||+++....... ...+++
T Consensus 381 ~~l~~~~~~------~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~g 454 (666)
T PLN02654 381 RSLMRDGDE------YVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPG 454 (666)
T ss_pred HHHHhhCcc------ccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCC
Confidence 999875211 123356789999999999999999999999997 689999999999866543322 245678
Q ss_pred ccccccCCeEEEEeeCCCCCCCCc-cceEEEeC--cchhhhhcCCCcccchh----hcccC
Q 015313 356 TVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS--PSLFKEYWKLPKESRTL----SSCLY 409 (409)
Q Consensus 356 ~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g--~~~~~gY~~~~~~t~~~----~~g~~ 409 (409)
++|.|+||++++|+|++|++++++ .|||++++ |+++.|||+||+++++. ++|||
T Consensus 455 s~G~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~ 515 (666)
T PLN02654 455 SATFPFFGVQPVIVDEKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYY 515 (666)
T ss_pred ccCCCCCCceEEEECCCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEE
Confidence 999999999999999999998887 79999999 79999999999999876 38987
No 19
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-51 Score=406.97 Aligned_cols=371 Identities=25% Similarity=0.365 Sum_probs=307.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.+.++.+|+++|+++.++++||+||.+++.++|..|.+. +|+++|++|+++++|+++
T Consensus 10 ~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~----------------~g~~~g~~V~i~~~~~~~ 73 (546)
T PRK08314 10 TSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQE----------------CGVRKGDRVLLYMQNSPQ 73 (546)
T ss_pred CCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCChH
Confidence 4688999999999999999999999999999999999999999984 388999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCC-------C---
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV-------S--- 150 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--- 150 (409)
++++++||+++|++++|+++..+.+++.++++.+++++++++++..+.+.................... .
T Consensus 74 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (546)
T PRK08314 74 FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPA 153 (546)
T ss_pred HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccc
Confidence 999999999999999999999999999999999999999999887766655433222111111000000 0
Q ss_pred -----------------CCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCe
Q 015313 151 -----------------SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQ 213 (409)
Q Consensus 151 -----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~ 213 (409)
.+................++++++++|||||||.||+|.++|++++..+......+.+..+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 233 (546)
T PRK08314 154 WLRAEPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESV 233 (546)
T ss_pred ccccccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCce
Confidence 000000000011122345689999999999999999999999999999888888888899999
Q ss_pred EEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHH
Q 015313 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE 293 (409)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~ 293 (409)
+++.+|++|..|++..++.++..|+++++.+.+++..+++. ++++++|++.++|.++..+++...
T Consensus 234 ~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~ll~~~~----- 298 (546)
T PRK08314 234 VLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARL----------IERYRVTHWTNIPTMVVDFLASPG----- 298 (546)
T ss_pred EEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHH----------HHHhcCceecccHHHHHHHHhCCC-----
Confidence 99999999999998888899999999999999999988888 778999999999999998876421
Q ss_pred HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeC-C
Q 015313 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAED-E 372 (409)
Q Consensus 294 ~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~-~ 372 (409)
....+++++|.+++||+++++++.+++.+.++.++++.||+||++.............+++|.|+++++++|+|+ +
T Consensus 299 ---~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~ 375 (546)
T PRK08314 299 ---LAERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDPET 375 (546)
T ss_pred ---ccccCchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeCCC
Confidence 123456789999999999999999999999999999999999998766544433345678999999999999995 5
Q ss_pred CCCCCCc-cceEEEeCcchhhhhcCCCcccchhh
Q 015313 373 SGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 373 ~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
++.++.| .|||+++|++++.||+++++.|++.+
T Consensus 376 ~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f 409 (546)
T PRK08314 376 LEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAF 409 (546)
T ss_pred CcCCCCCCceEEEEECCchhccccCChhHhhhhh
Confidence 6778777 89999999999999999999998874
No 20
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.7e-51 Score=407.26 Aligned_cols=370 Identities=22% Similarity=0.328 Sum_probs=296.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
|+.+.|.+.++++|+++|++++++.+||+||.++++++|++|.+. |+++||+|+++++|++++
T Consensus 8 ~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-----------------Gv~~gd~V~v~~~n~~~~ 70 (563)
T PLN02860 8 HICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRL-----------------GLRNGDVVAIAALNSDLY 70 (563)
T ss_pred HHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHHH
Confidence 688999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHh-hccCC-ceeccCCCCC---------CC
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVA-SKSGA-KFSLIPPVPN---------VS 150 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~---------~~ 150 (409)
+++++||+++|++++|+++.++.+++.++++++++++++++++.......+. ..... ...+...... ..
T Consensus 71 ~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (563)
T PLN02860 71 LEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFL 150 (563)
T ss_pred HHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhcc
Confidence 9999999999999999999999999999999999999999876533332221 11111 1111100000 00
Q ss_pred CCcccccc--chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH
Q 015313 151 SETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (409)
Q Consensus 151 ~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 228 (409)
........ ..........++++++++|||||||.||+|.++|+++..........+++.++|+++...|++|..++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~- 229 (563)
T PLN02860 151 TTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 229 (563)
T ss_pred ccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHH-
Confidence 00000000 000001123568999999999999999999999999988777776777888999999999999999985
Q ss_pred HHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEE
Q 015313 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (409)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v 308 (409)
.++.++..|+++++.+.+++..+++. ++++++|++.++|.++..+++.... ......++++|.+
T Consensus 230 ~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~~ 293 (563)
T PLN02860 230 SALAMLMVGACHVLLPKFDAKAALQA----------IKQHNVTSMITVPAMMADLISLTRK------SMTWKVFPSVRKI 293 (563)
T ss_pred HHHHHHHcCceEEecCCCCHHHHHHH----------HHHhCCeeEEeChHHHHHHHHhhhh------hhccccccceeEE
Confidence 47889999999999999999999888 7889999999999999999875211 1122457899999
Q ss_pred EeeCCCCCHHHHHHHHHHh-CCccccccccccccccccccC-CC----------------------CCCccccccccCCe
Q 015313 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-RG----------------------ARKAGTVGNPLPGV 364 (409)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~-~~----------------------~~~~~~~G~p~~~~ 364 (409)
++||+++++++.+++++.| ++++++.||+||+++.+.... .. .....++|+|+|++
T Consensus 294 ~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~ 373 (563)
T PLN02860 294 LNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV 373 (563)
T ss_pred EeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc
Confidence 9999999999999999998 789999999999875443211 00 11233689999999
Q ss_pred EEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 365 QVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 365 ~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
+++|+|++ ++..|||+++||+++.|||++|+.|++.+ ||||
T Consensus 374 ~v~i~~~~----~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~ 416 (563)
T PLN02860 374 ELKIGLDE----SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWL 416 (563)
T ss_pred EEEEecCC----CCceeEEEEecCcccccccCCccccchhccCCCeE
Confidence 99999976 33489999999999999999999999874 7897
No 21
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.1e-51 Score=408.98 Aligned_cols=373 Identities=21% Similarity=0.243 Sum_probs=285.4
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC------ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEe
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~ 75 (409)
++.+.|+++++.+||++|+++.+ +.+||+||.++++++|++|.+. |+++||+|++++
T Consensus 50 ~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-----------------Gv~~gd~V~i~~ 112 (624)
T PRK12582 50 SIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDL-----------------GLDPGRPVMILS 112 (624)
T ss_pred CHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEec
Confidence 67889999999999999998743 6899999999999999999984 899999999999
Q ss_pred CCCHHHHHHHHHHHhhCcEEEeCCCCCCh-----HHHHHHHhcCCceEEEechhH-H-HHHHHHhhccCCceeccCCCCC
Q 015313 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPE-----SELLHVMHDSDISMVLSTEDY-R-EVLQNVASKSGAKFSLIPPVPN 148 (409)
Q Consensus 76 ~~~~~~~~~~~A~~~~G~~~~~i~~~~~~-----~~~~~~l~~~~~~~vi~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 148 (409)
+|+++++++++||+++|++++|+++.++. +++.++++.++++++|+++.. . ..+... .......+.......
T Consensus 113 ~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 191 (624)
T PRK12582 113 GNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAAL-DLLDVTVVHVTGPGE 191 (624)
T ss_pred CCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhh-hhcCceEEEEcCCCc
Confidence 99999999999999999999999999875 899999999999999998642 1 222211 111122222111100
Q ss_pred C---CCCccccccc----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCC---CCeEEEec
Q 015313 149 V---SSETTVFDQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS---ADQFLHCL 218 (409)
Q Consensus 149 ~---~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~---~d~~l~~~ 218 (409)
. .......... .........++++++|+|||||||.||+|.+||+++...+........... .++++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 271 (624)
T PRK12582 192 GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWM 271 (624)
T ss_pred ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEec
Confidence 0 0000000000 001112245689999999999999999999999999987776655444443 57999999
Q ss_pred CchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHH
Q 015313 219 PLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (409)
Q Consensus 219 pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~ 297 (409)
|++|.+|+...++.++..|+++++.+. +.+..+.+.+.. ++++++|+++++|.++..|++.+...+ ..
T Consensus 272 Pl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~-------i~~~~~t~~~~vP~~~~~l~~~~~~~~----~~ 340 (624)
T PRK12582 272 PWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRN-------LREISPTVYGNVPAGYAMLAEAMEKDD----AL 340 (624)
T ss_pred hHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHH-------HHhcCCeEEeccCHHHHHHHHHHhhCH----HH
Confidence 999999987777888999999999763 333333333222 778999999999999999877543211 12
Q ss_pred hhhhhccceEEEeeCCCCCHHHHHHHHHHh----C--CccccccccccccccccccCCCCCCccccccccCCeEEEEeeC
Q 015313 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT----G--HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAED 371 (409)
Q Consensus 298 ~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~----~--~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~ 371 (409)
...++++||.+++||+++++++.+++.+.+ | +++++.||+||++.++........+.+++|+|+||++++|++.
T Consensus 341 ~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~~ 420 (624)
T PRK12582 341 RRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAPV 420 (624)
T ss_pred HHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEccC
Confidence 334678999999999999999999998863 3 6899999999998765532323456789999999999999742
Q ss_pred CCCCCCCccceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 372 ESGSDAAGVGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 372 ~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
++.|||+|+||+++.|||++|++|++.+ ||||
T Consensus 421 ------G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~ 454 (624)
T PRK12582 421 ------GDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFY 454 (624)
T ss_pred ------CCceEEEEECCcccccccCCccchhhhcCccCCc
Confidence 1269999999999999999999999885 7998
No 22
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.9e-51 Score=401.35 Aligned_cols=371 Identities=16% Similarity=0.230 Sum_probs=304.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.+.++++||++|++++++++||+||.++++++|++|.+. |+++|++|+++++|++++
T Consensus 44 ~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~-----------------g~~~g~~V~i~~~n~~~~ 106 (537)
T PRK13382 44 GPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQAL-----------------PIGEPRVVGIMCRNHRGF 106 (537)
T ss_pred CHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEecCcHHH
Confidence 577889999999999999999999999999999999999999984 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-Cc-eeccCCCCCCCCCccccccc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AK-FSLIPPVPNVSSETTVFDQS 159 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 159 (409)
+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+........ .. ...+................
T Consensus 107 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (537)
T PRK13382 107 VEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAH 186 (537)
T ss_pred HHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhcc
Confidence 99999999999999999999999999999999999999999877665544322211 11 11111110000000000000
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
. .......+++.++++|||||||.||+|.++|+++..........+....+++++...|++|..++. .++.++..|++
T Consensus 187 ~-~~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~g~~ 264 (537)
T PRK13382 187 A-GQRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFS-QLVLAASLACT 264 (537)
T ss_pred C-cCCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHH-HHHHHHhcCcE
Confidence 0 001122457899999999999999999999999988888777777888899999999999999984 58888999999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++...+++..+++. ++++++|++.++|.+++.+++.... .....+++++|.+++||+++++++
T Consensus 265 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~gG~~l~~~~ 328 (537)
T PRK13382 265 IVTRRRFDPEATLDL----------IDRHRATGLAVVPVMFDRIMDLPAE------VRNRYSGRSLRFAAASGSRMRPDV 328 (537)
T ss_pred EEECCCcCHHHHHHH----------HHHhCCEEEEehHHHHHHHHcCCch------hcccCCccceeEEEEcCCCCCHHH
Confidence 999999999999988 7889999999999999999774211 112234578999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccccCC-CCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCC
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~-~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
++.|.+.++.++++.||+||++.++..... .....+++|+|+++++++|+|+++++++.| .|||+++||+++.||+
T Consensus 329 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~~~~gY~-- 406 (537)
T PRK13382 329 VIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRNDTQFDGYT-- 406 (537)
T ss_pred HHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEcCCcccCcc--
Confidence 999999999999999999999876553322 234677999999999999999999999888 7999999999999998
Q ss_pred CcccchhhcccC
Q 015313 398 PKESRTLSSCLY 409 (409)
Q Consensus 398 ~~~t~~~~~g~~ 409 (409)
|+.+....||||
T Consensus 407 ~~~~~~~~~g~~ 418 (537)
T PRK13382 407 SGSTKDFHDGFM 418 (537)
T ss_pred ccchhhccCCCE
Confidence 677777789997
No 23
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-50 Score=397.35 Aligned_cols=366 Identities=24% Similarity=0.382 Sum_probs=308.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.+.++.+||++|++++++.+||+||+++++++|+.|++. +|+.+|++|+++++|++++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~----------------~g~~~~~~V~i~~~~~~~~ 66 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYE----------------LNVKKGERIAILSQNSLEY 66 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 467899999999999999999999999999999999999999863 5899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc-eeccCCCCCCCCCccccccch
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQSQ 160 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (409)
+++++||+++|++++|+++..+.+++..+++++++++++++++..+.+.......... ...+........ ..
T Consensus 67 ~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 139 (496)
T PRK06839 67 IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKEIED-------RK 139 (496)
T ss_pred HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHhhhc-------cC
Confidence 9999999999999999999999999999999999999999988776665554332211 111111111000 00
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEE
Q 015313 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (409)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i 240 (409)
........++++++++|||||||.||+|.++|+++..........++...+|++++.+|++|..++....+.++..|+++
T Consensus 140 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~ 219 (496)
T PRK06839 140 IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVI 219 (496)
T ss_pred CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEE
Confidence 01122345688999999999999999999999999876666666778889999999999999999877678889999999
Q ss_pred EEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHH
Q 015313 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (409)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~ 320 (409)
++.+.+++..+++. ++++++|.+.++|.+++.+++... ....+++++|.+++||+++++++.
T Consensus 220 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gG~~~~~~~~ 281 (496)
T PRK06839 220 IVPRKFEPTKALSM----------IEKHKVTVVMGVPTIHQALINCSK--------FETTNLQSVRWFYNGGAPCPEELM 281 (496)
T ss_pred EEccCCCHHHHHHH----------HHhhCCeEEEehHHHHHHHHhCcc--------cccCCCcccceEEECCCCCCHHHH
Confidence 99999999999988 788999999999999999987532 123467899999999999999999
Q ss_pred HHHHHHhCCcccccccccccccccccc--CCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCC
Q 015313 321 QQWETITGHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 321 ~~~~~~~~~~v~~~YG~tE~g~~~~~~--~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
+.+.+. |+++.+.||+||++...... .......+++|+|+++++++|+|++++.++.| .|||+++|++++.|||++
T Consensus 282 ~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 360 (496)
T PRK06839 282 REFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNR 360 (496)
T ss_pred HHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEECCCcchhhcCC
Confidence 999887 99999999999998654322 22235678899999999999999999988877 899999999999999999
Q ss_pred Ccccchh-hcccC
Q 015313 398 PKESRTL-SSCLY 409 (409)
Q Consensus 398 ~~~t~~~-~~g~~ 409 (409)
|+.++.. .+|||
T Consensus 361 ~~~~~~~~~~g~~ 373 (496)
T PRK06839 361 PDATEETIQDGWL 373 (496)
T ss_pred hHHHHHHHcCCCe
Confidence 9999887 67887
No 24
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-50 Score=401.96 Aligned_cols=374 Identities=23% Similarity=0.367 Sum_probs=301.4
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
|+.+.|++.++.+|+++|++++++.+||+||.+++.++|+.|.+. .|+++||+|+++++|++++
T Consensus 25 ~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~----------------~gi~~gd~Vai~~~n~~~~ 88 (562)
T PRK05677 25 NIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQH----------------TDLKPGDRIAVQLPNVLQY 88 (562)
T ss_pred cHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 678899999999999999999999999999999999999999863 3889999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCC----------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSS---------- 151 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 151 (409)
++++|||+++|++++|+++..+.+++.+++++++++++|++.+....+.+.....+..............
T Consensus 89 ~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK05677 89 PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAV 168 (562)
T ss_pred HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccc
Confidence 9999999999999999999999999999999999999999887766555443332222221111000000
Q ss_pred ---------------Cccccc---c--chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc--cC
Q 015313 152 ---------------ETTVFD---Q--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YT 209 (409)
Q Consensus 152 ---------------~~~~~~---~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~ 209 (409)
.....+ . ..........++++++++|||||||.||+|.++|+++...+......+. ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 248 (562)
T PRK05677 169 VKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLN 248 (562)
T ss_pred hhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCC
Confidence 000000 0 0000112235689999999999999999999999999887665554433 33
Q ss_pred -CCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhh
Q 015313 210 -SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (409)
Q Consensus 210 -~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~ 287 (409)
..+.+++.+|++|..++...++..+..|++.++.+ ..++..+++. ++++++|.++++|.++..+++..
T Consensus 249 ~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 318 (562)
T PRK05677 249 EGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKE----------LGKWKFSGFVGLNTLFVALCNNE 318 (562)
T ss_pred CCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHH----------HHHcCceEEecHHHHHHHHHhCc
Confidence 34688999999999998766778888888777665 4677888887 78899999999999999887641
Q ss_pred hhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEE
Q 015313 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVK 367 (409)
Q Consensus 288 ~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ 367 (409)
. ....+++++|.+++||+++++++.++|.+.+++++++.||+||++.++.........++++|.|+++++++
T Consensus 319 ~--------~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~ 390 (562)
T PRK05677 319 A--------FRKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCK 390 (562)
T ss_pred c--------cccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCCEEE
Confidence 1 12234678999999999999999999999999999999999999876654444445667899999999999
Q ss_pred EeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 368 IAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 368 ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
|+|+++++++.| .|||+++||+++.|||++|++|++.+ ||||
T Consensus 391 i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~ 435 (562)
T PRK05677 391 VIDDDGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWL 435 (562)
T ss_pred EECCCCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcc
Confidence 999999999888 89999999999999999999999884 7897
No 25
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-50 Score=398.48 Aligned_cols=374 Identities=27% Similarity=0.405 Sum_probs=312.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.+.++.+|+++|++++++++||+||++++.++|..|.+. |+++||+|+++++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gv~~g~~V~l~~~~~~~ 67 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAAL-----------------GIGKGDRVAIWAPNSPH 67 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCChH
Confidence 4678999999999999999999999999999999999999999984 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC-ceecc-CCCCCCCC------C
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLI-PPVPNVSS------E 152 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~------~ 152 (409)
++++++||+++|++++|+++..+.+++..++++++++++++++.....+......... ..+.. ........ .
T Consensus 68 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (513)
T PRK07656 68 WVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTF 147 (513)
T ss_pred HHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccH
Confidence 9999999999999999999999999999999999999999998876655544332221 11111 11111000 0
Q ss_pred ccccccc-hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHH
Q 015313 153 TTVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (409)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~ 231 (409)
....... ..........+++++++|||||||.||+|.++|.++...+......++..++|++++.+|++|.+++...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
T PRK07656 148 TDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVN 227 (513)
T ss_pred HHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHH
Confidence 0000000 001122346688999999999999999999999999998888888889999999999999999999887889
Q ss_pred HHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEee
Q 015313 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (409)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~g 311 (409)
.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+.... ....++++|.+++|
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~l~~v~~~ 289 (513)
T PRK07656 228 APLMRGATILPLPVFDPDEVFRL----------IETERITVLPGPPTMYNSLLQHPDR--------SAEDLSSLRLAVTG 289 (513)
T ss_pred HHHHcCceEEecCcCCHHHHHHH----------HHHhCCeEEechHHHHHHHHcCCCc--------CCCCccceeeEEec
Confidence 99999999999988899999988 7789999999999999999886432 22357889999999
Q ss_pred CCCCCHHHHHHHHHHhCC-ccccccccccccccccccCC-CCCC--ccccccccCCeEEEEeeCCCCCCCCc-cceEEEe
Q 015313 312 SSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLR-GARK--AGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVK 386 (409)
Q Consensus 312 G~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~~~~-~~~~--~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~ 386 (409)
|+++++++.+.+.+.++. .+++.||+||++++...+.. .... .+++|.|+++++++|+|+++++++.| .|||+++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 369 (513)
T PRK07656 290 AASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVR 369 (513)
T ss_pred CCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEE
Confidence 999999999999999998 99999999999866554332 2222 67899999999999999999999888 8999999
Q ss_pred CcchhhhhcCCCcccchhh--cccC
Q 015313 387 SPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 387 g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
|++++.||+++++.+...+ ||||
T Consensus 370 ~~~~~~gy~~~~~~~~~~~~~~~~~ 394 (513)
T PRK07656 370 GPNVMKGYYDDPEATAAAIDADGWL 394 (513)
T ss_pred cchhhhhhcCCHHHHhhhhccCCce
Confidence 9999999999999998874 7887
No 26
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.7e-50 Score=406.30 Aligned_cols=379 Identities=21% Similarity=0.295 Sum_probs=284.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeC----C-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
|+.+.|.+.++.+|+++|+.+. + +++||+||.++++++|+.|.+. |+++||+|+
T Consensus 43 t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-----------------Gv~~gd~V~ 105 (660)
T PLN02430 43 TAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRAS-----------------GAEPGSRVG 105 (660)
T ss_pred CHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEE
Confidence 5788999999999999999642 1 3479999999999999999994 999999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH-HHHHHHhhccC-Cc-eeccCCCCCC
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-EVLQNVASKSG-AK-FSLIPPVPNV 149 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~ 149 (409)
|+++|++||+++++||+++|++++|+++.++++++.++++.++++++|++.+.. ..+........ .. ++.+......
T Consensus 106 i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 185 (660)
T PLN02430 106 IYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEE 185 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChH
Confidence 999999999999999999999999999999999999999999999999987543 23322211111 11 1111110000
Q ss_pred C------------CCccccccc--hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh-----cccCC
Q 015313 150 S------------SETTVFDQS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA-----WEYTS 210 (409)
Q Consensus 150 ~------------~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-----~~~~~ 210 (409)
. ......... .........++|+++|+|||||||.||||.+||+++...+...... ..++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 186 ESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred HhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 0 000000000 0001122357899999999999999999999999999877665332 14678
Q ss_pred CCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 211 ~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
+|++++.+|++|.+++.. .+.++..|+++++... ++..+++. +.+++||++.++|.+++.+.+.....
T Consensus 266 ~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~----------l~~~~pt~~~~vP~~~~~l~~~i~~~ 333 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDD----------LMELKPTLLAGVPRVFERIHEGIQKA 333 (660)
T ss_pred CCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHH----------HHHhCCcEEEecHHHHHHHHHHHHHH
Confidence 899999999999999876 4557899999988764 66777777 67789999999999999887643210
Q ss_pred hHH-------------------------------------HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCcccc
Q 015313 291 DTE-------------------------------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333 (409)
Q Consensus 291 ~~~-------------------------------------~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~ 333 (409)
... ....+....+++|.+++||+++++++.+.++...++.+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~ 413 (660)
T PLN02430 334 LQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQ 413 (660)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeee
Confidence 000 0011111237899999999999999866555443478999
Q ss_pred ccccccccccccc-cCCCCCCccccccccCCeEEEEeeC--CC-CCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcc
Q 015313 334 RYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAED--ES-GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSC 407 (409)
Q Consensus 334 ~YG~tE~g~~~~~-~~~~~~~~~~~G~p~~~~~~~ivd~--~~-~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g 407 (409)
.||+||++++.+. .+......+++|.|.|+++++++|. .+ .+.+.+ .|||+|+||+++.|||++|++|+++ .||
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dG 493 (660)
T PLN02430 414 GYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDG 493 (660)
T ss_pred ecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhcc
Confidence 9999999865543 3333345789999999999999873 23 233444 6999999999999999999999998 599
Q ss_pred cC
Q 015313 408 LY 409 (409)
Q Consensus 408 ~~ 409 (409)
||
T Consensus 494 w~ 495 (660)
T PLN02430 494 WF 495 (660)
T ss_pred ce
Confidence 98
No 27
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-51 Score=410.38 Aligned_cols=375 Identities=17% Similarity=0.167 Sum_probs=286.8
Q ss_pred HHHHHHhccc--CCCeeEEEeC------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEe
Q 015313 4 FKAAYKKGSM--ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (409)
Q Consensus 4 ~~~l~~~~~~--~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~ 75 (409)
.+.+.++++. +||++|+++. .+++||+||.++++++|+.|++ +|+++||+|++++
T Consensus 62 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GDrV~i~~ 124 (647)
T PTZ00237 62 YNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-----------------LNISKNDNVLIYM 124 (647)
T ss_pred HHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 3455666654 7999999873 3589999999999999999999 4999999999999
Q ss_pred CCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh---------HHHHHHHHhhccC---Cceecc
Q 015313 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED---------YREVLQNVASKSG---AKFSLI 143 (409)
Q Consensus 76 ~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~---~~~~~~ 143 (409)
+|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+........ ..++..
T Consensus 125 ~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 204 (647)
T PTZ00237 125 ANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITL 204 (647)
T ss_pred CCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999752 2233333222111 111111
Q ss_pred CCCCC--------------CCCCcccccc---------chhhhccCCCCCCcEEEEecCCCCCCCceeeechHH-HHHHH
Q 015313 144 PPVPN--------------VSSETTVFDQ---------SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS-IDAQV 199 (409)
Q Consensus 144 ~~~~~--------------~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~-l~~~~ 199 (409)
..... ........+. ..........++++++|+|||||||.||||+++|.+ +....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~ 284 (647)
T PTZ00237 205 FRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLK 284 (647)
T ss_pred EcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHH
Confidence 10000 0000000000 000011234678999999999999999999999998 44433
Q ss_pred HHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc--c----hHHHHHHHHhhcCCCCCCccccceee
Q 015313 200 QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF--S----VRGIWQRWRESYPVNGNRAGEAITAF 273 (409)
Q Consensus 200 ~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~--~----~~~~~~~~~~~~~~~~~i~~~~vt~~ 273 (409)
...........+|++++..|++|+.++. .++.++..|+++++.++. . +..+++. ++++++|++
T Consensus 285 ~~~~~~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~----------i~~~~vt~~ 353 (647)
T PTZ00237 285 YYWRSIIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNT----------IEKHKVTHT 353 (647)
T ss_pred HHHHHhcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHH----------HHHhCeEEE
Confidence 3334455667789999999999987664 488899999999998751 2 5677777 888999999
Q ss_pred ecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCcccccccccccccccccc-CCCCC
Q 015313 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGAR 352 (409)
Q Consensus 274 ~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~-~~~~~ 352 (409)
.++|++++.+++...... ......++++||.+++||+++++++.+++.+.+|+++++.||+||+++..... .....
T Consensus 354 ~~~P~~~~~l~~~~~~~~---~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~ 430 (647)
T PTZ00237 354 LTLPKTIRYLIKTDPEAT---IIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINI 430 (647)
T ss_pred EeCHHHHHHHHhhCcccc---ccccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCCCC
Confidence 999999999987421100 00123468899999999999999999999999999999999999998654432 22233
Q ss_pred CccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCc---chhhhhcCCCcccchhh---cccC
Q 015313 353 KAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP---SLFKEYWKLPKESRTLS---SCLY 409 (409)
Q Consensus 353 ~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~---~~~~gY~~~~~~t~~~~---~g~~ 409 (409)
..+++|+|+|+++++|+|++|++++.| .|||+++|| +++.|||++|++|++.+ +|||
T Consensus 431 ~~~s~G~p~~g~~~~i~d~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~ 494 (647)
T PTZ00237 431 PYNATGVPSIFIKPSILSEDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYY 494 (647)
T ss_pred CCCCCccCcCCceEEEECCCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEE
Confidence 458899999999999999999998777 899999986 88999999999998765 6887
No 28
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-50 Score=406.57 Aligned_cols=371 Identities=23% Similarity=0.342 Sum_probs=293.6
Q ss_pred hHHHHHHHhcccCCCeeEEEe--------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEE
Q 015313 2 EVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGI 73 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~--------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l 73 (409)
|+.+.|.++++.+||++|+++ ..+++||+||.+++.++|+.|.+ +|+++||+|++
T Consensus 26 t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-----------------~Gi~~gd~V~i 88 (632)
T PRK07529 26 STYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-----------------LGVGPGDVVAF 88 (632)
T ss_pred CHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEE
Confidence 678999999999999999986 35799999999999999999999 49999999999
Q ss_pred EeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH-----HHHHHHHhhccCC-cee-ccCCC
Q 015313 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA-KFS-LIPPV 146 (409)
Q Consensus 74 ~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~-~~~-~~~~~ 146 (409)
+++|++++++++|||+++| +++|+++.++++++.++++.++++++|++... ...+......... ..+ .+...
T Consensus 89 ~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 167 (632)
T PRK07529 89 LLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLA 167 (632)
T ss_pred ECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCc
Confidence 9999999999999999999 56999999999999999999999999997542 2333333222221 111 11110
Q ss_pred CCCC----------------CCccccccch------hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHh
Q 015313 147 PNVS----------------SETTVFDQSQ------AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE 204 (409)
Q Consensus 147 ~~~~----------------~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~ 204 (409)
.... ......+... ........++++++++|||||||.||+|.++|++++........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~ 247 (632)
T PRK07529 168 RYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL 247 (632)
T ss_pred ccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH
Confidence 0000 0000000000 00111235689999999999999999999999999988877777
Q ss_pred hcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc--c----hHHHHHHHHhhcCCCCCCccccceeeecchH
Q 015313 205 AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF--S----VRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (409)
Q Consensus 205 ~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~--~----~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (409)
.+.+.++|++++.+|++|..+++..++.++..|+++++.+.. . ...+++. ++++++|++.++|+
T Consensus 248 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~ 317 (632)
T PRK07529 248 LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKI----------VERYRINFLSGVPT 317 (632)
T ss_pred hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHH----------HHHhCCeEEEeHHH
Confidence 778889999999999999999887889999999999998642 1 2455555 78899999999999
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccC-CCCCCcccc
Q 015313 279 MYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTV 357 (409)
Q Consensus 279 ~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~ 357 (409)
++..+++... ...++++||.+++||+++++++.+++++.+++++++.||+||+++++.... ......+++
T Consensus 318 ~~~~l~~~~~---------~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~sv 388 (632)
T PRK07529 318 VYAALLQVPV---------DGHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDGERRIGSV 388 (632)
T ss_pred HHHHHHhCcc---------cCCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccccccCCCc
Confidence 9999987521 224678999999999999999999999999999999999999987655433 334567899
Q ss_pred ccccCCeEEEEe--eCCC---CCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 358 GNPLPGVQVKIA--EDES---GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 358 G~p~~~~~~~iv--d~~~---~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
|.|+|+++++|+ |++| ++++.| .|||+++||+++.||+++++.++.. .+|||
T Consensus 389 G~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~ 447 (632)
T PRK07529 389 GLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWL 447 (632)
T ss_pred ccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCccccccccCCCce
Confidence 999999998885 6667 667777 8999999999999999876544333 47887
No 29
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.5e-50 Score=406.92 Aligned_cols=373 Identities=19% Similarity=0.265 Sum_probs=294.5
Q ss_pred HHHHHHhcccCCCeeEEEeCC------ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 4 ~~~l~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
.+.|.++++.+||++|+++.+ +++||+||++++.++|+.|++ +|+++||+|+++++|
T Consensus 60 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 122 (625)
T TIGR02188 60 YNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-----------------LGVKKGDRVAIYMPM 122 (625)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 455667888899999998743 489999999999999999999 499999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH---------HHHHHHhhccC--Cc-eeccCC
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---------EVLQNVASKSG--AK-FSLIPP 145 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~--~~-~~~~~~ 145 (409)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+........ .. .+....
T Consensus 123 ~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (625)
T TIGR02188 123 IPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRR 202 (625)
T ss_pred CHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcC
Confidence 9999999999999999999999999999999999999999999987532 23333322221 11 111111
Q ss_pred CCCCCCC--------ccccc-cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHH-HHHhhcccCCCCeEE
Q 015313 146 VPNVSSE--------TTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ-MLTEAWEYTSADQFL 215 (409)
Q Consensus 146 ~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~d~~l 215 (409)
....... ..... ...........++++++|+|||||||.||+|+++|++++.... .....+++.++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~ 282 (625)
T TIGR02188 203 TGNPVPWVEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFW 282 (625)
T ss_pred CCCCcCccccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEE
Confidence 1000000 00000 0001112234568999999999999999999999999875443 334456788899999
Q ss_pred EecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhh
Q 015313 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (409)
Q Consensus 216 ~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~ 291 (409)
+..|++|..++...++.+|..|+++++.+. +++..+++. ++++++|++.++|++++.+.+....
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~-- 350 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEI----------IEKHKVTIFYTAPTAIRALMRLGDE-- 350 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc--
Confidence 999999999886678899999999999864 368888888 7889999999999999999875221
Q ss_pred HHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC---CccccccccccccccccccCC--CCCCccccccccCCeEE
Q 015313 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQV 366 (409)
Q Consensus 292 ~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~---~~v~~~YG~tE~g~~~~~~~~--~~~~~~~~G~p~~~~~~ 366 (409)
.....++++||.+++||+++++++.+++.+.++ +++++.||+||+++.+..... ...+++++|+|++++++
T Consensus 351 ----~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~ 426 (625)
T TIGR02188 351 ----WVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEP 426 (625)
T ss_pred ----ccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceE
Confidence 122346789999999999999999999999885 789999999999876543221 23567889999999999
Q ss_pred EEeeCCCCCCC-Cc-cceEEEeC--cchhhhhcCCCcccchh----hcccC
Q 015313 367 KIAEDESGSDA-AG-VGEICVKS--PSLFKEYWKLPKESRTL----SSCLY 409 (409)
Q Consensus 367 ~ivd~~~~~~~-~~-~Gel~v~g--~~~~~gY~~~~~~t~~~----~~g~~ 409 (409)
+|+|++|++++ .| .|||+++| |+++.|||++|+.+.+. .+|||
T Consensus 427 ~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~ 477 (625)
T TIGR02188 427 AVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYY 477 (625)
T ss_pred EEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEE
Confidence 99999999888 66 89999999 68999999999988776 37886
No 30
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=8.7e-50 Score=392.07 Aligned_cols=370 Identities=33% Similarity=0.534 Sum_probs=307.8
Q ss_pred hHHHHHHHhcccCCCeeEEEe-CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
++.+.+..++ .+|+++|+.+ +++.+||.||.++++++|..|++. |+++||+|+++++|+++
T Consensus 4 ~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~-----------------g~~~gd~v~i~~~~~~e 65 (504)
T PRK07514 4 NLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVAL-----------------GVKPGDRVAVQVEKSPE 65 (504)
T ss_pred cHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 5788899999 8999999988 678999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc-eeccCCCCCCCCCccccccc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQS 159 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (409)
++++++||+++|++++|+++..+.+++..+++.++++++++++.....+.......... ...+................
T Consensus 66 ~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (504)
T PRK07514 66 ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAP 145 (504)
T ss_pred HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcC
Confidence 99999999999999999999999999999999999999999988776665554433322 11111111000000000000
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
..........+++++++|||||||.||+|.++|+++...+......++..++|++++.+|++|..++...++.++..|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 11112234578999999999999999999999999999988888888889999999999999999987778899999999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+..++..+++. + .++|.+.++|.++..+++... .....++++|.+++||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gg~~~~~~~ 285 (504)
T PRK07514 226 MIFLPKFDPDAVLAL----------M--PRATVMMGVPTFYTRLLQEPR--------LTREAAAHMRLFISGSAPLLAET 285 (504)
T ss_pred EEECCCCCHHHHHHH----------H--HhheeeecHHHHHHHHHcCCC--------CCcccccceeeEEecCCCCCHHH
Confidence 999999899888887 4 379999999999999886521 22345778999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEee-CCCCCCCCc-cceEEEeCcchhhhhcCC
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE-DESGSDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~~~~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
.+.+.+.++.++++.||+||++..............++|.|+++++++|+| +++++++.| .|||+++|++++.|||++
T Consensus 286 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~ 365 (504)
T PRK07514 286 HREFQERTGHAILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRM 365 (504)
T ss_pred HHHHHHHhCCcceeecccccccccccCCccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCC
Confidence 999999999999999999999876654443444567899999999999999 778888887 899999999999999999
Q ss_pred Ccccchhh--cccC
Q 015313 398 PKESRTLS--SCLY 409 (409)
Q Consensus 398 ~~~t~~~~--~g~~ 409 (409)
|+.+++.+ +|||
T Consensus 366 ~~~~~~~~~~~~~~ 379 (504)
T PRK07514 366 PEKTAEEFRADGFF 379 (504)
T ss_pred chhhhhhcccCCCe
Confidence 99999884 7887
No 31
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-50 Score=399.87 Aligned_cols=370 Identities=23% Similarity=0.306 Sum_probs=300.4
Q ss_pred HHHHHhcc-cCCCeeEEEeCC----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 5 KAAYKKGS-MARDSVAIRADQ----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 5 ~~l~~~~~-~~~~~~a~~~~~----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
+.+.+++. .+|+++|+.+.+ +.+||+||.+++.++|..|.+ +|+++||+|+++++|++
T Consensus 47 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-----------------~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 47 EAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-----------------LGVEKGDRVFIFMPRIP 109 (570)
T ss_pred HHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCH
Confidence 56777776 479999998743 689999999999999999998 49999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-Cc-eeccCCCCCCCC-Ccccc
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AK-FSLIPPVPNVSS-ETTVF 156 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~ 156 (409)
+++++++||+++|++++|+++.++.+++.++++.++++++|+++......... ... .. .+.+........ .....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD--DLPSLKHVLLVGEDVEEGPGTLDFN 187 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh--cCCCceEEEEECCCcCCCcCccCHH
Confidence 99999999999999999999999999999999999999999998765433211 111 11 111111110000 00000
Q ss_pred c----cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHH
Q 015313 157 D----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (409)
Q Consensus 157 ~----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~ 232 (409)
+ ...........++++++++|||||||.||+|.++|++++..+......+++.++|++++..|+.|..++...++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 267 (570)
T PRK04319 188 ALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFA 267 (570)
T ss_pred HHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHH
Confidence 0 000111223456889999999999999999999999999888887788888899999999999999988778999
Q ss_pred HHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEee
Q 015313 233 PLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (409)
Q Consensus 233 ~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~g 311 (409)
++..|+++++.. .+++..+++. ++++++|+++++|.+++.+.+.... .....++++||.+++|
T Consensus 268 ~l~~G~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 268 PWLNGATNVIDGGRFSPERWYRI----------LEDYKVTVWYTAPTAIRMLMGAGDD------LVKKYDLSSLRHILSV 331 (570)
T ss_pred HHhcCceEEEECCCCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcCCc------ccccCCcccceEEEEc
Confidence 999999999875 5789999888 7889999999999999999764211 1123457899999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccccccccccc-ccCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeC--
Q 015313 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS-- 387 (409)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~-~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g-- 387 (409)
|+++++++.+++.+.++.++++.||+||+++... ........++++|.|+|+++++|+|+++++++.| .|||+++|
T Consensus 332 G~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~Gel~i~~~~ 411 (570)
T PRK04319 332 GEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRMGNLAIKKGW 411 (570)
T ss_pred ccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCceEEEEcCCC
Confidence 9999999999999999999999999999986543 3333345678999999999999999999888887 89999997
Q ss_pred cchhhhhcCCCcccchh-hcccC
Q 015313 388 PSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 388 ~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
|+++.||||+|+.|++. .+|||
T Consensus 412 ~~~~~GY~~~~~~~~~~~~~gw~ 434 (570)
T PRK04319 412 PSMMRGIWNNPEKYESYFAGDWY 434 (570)
T ss_pred ChHHhHhcCCHHHhhhhhcCCce
Confidence 89999999999999988 58897
No 32
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.9e-50 Score=395.41 Aligned_cols=374 Identities=21% Similarity=0.316 Sum_probs=304.2
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC--CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~ 78 (409)
+|+.+.+.++++++|+++|+++. ++++||.||.++++++|+.|.+. |+++||+|+++++|+
T Consensus 23 ~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~-----------------g~~~gd~V~i~~~~~ 85 (537)
T PLN02246 23 LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKL-----------------GIRQGDVVMLLLPNC 85 (537)
T ss_pred CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCC
Confidence 57889999999999999999975 47899999999999999999984 899999999999999
Q ss_pred HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCC-CCCCccccc
Q 015313 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-VSSETTVFD 157 (409)
Q Consensus 79 ~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 157 (409)
++++++++||+++|++++|+++..+.+++..+++.++++++|++......+...........+.+..... .........
T Consensus 86 ~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (537)
T PLN02246 86 PEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQ 165 (537)
T ss_pred hHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhc
Confidence 9999999999999999999999999999999999999999999988777665544322222222221110 000000000
Q ss_pred -cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHh----hcccCCCCeEEEecCchhHHHHHHHHHH
Q 015313 158 -QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLA 232 (409)
Q Consensus 158 -~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~g~~~~~~~ 232 (409)
...........++++++++|||||||.||+|.++|++++..+..... .+.+..+|++++.+|++|..++...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 245 (537)
T PLN02246 166 ADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLC 245 (537)
T ss_pred CCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHH
Confidence 00001122345789999999999999999999999999887765433 4678899999999999999998766788
Q ss_pred HHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeC
Q 015313 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (409)
Q Consensus 233 ~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG 312 (409)
++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+... .....++++|.+++||
T Consensus 246 ~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~--------~~~~~~~~lr~~~~gg 307 (537)
T PLN02246 246 GLRVGAAILIMPKFEIGALLEL----------IQRHKVTIAPFVPPIVLAIAKSPV--------VEKYDLSSIRMVLSGA 307 (537)
T ss_pred HHhcCCEEEEeCCCCHHHHHHH----------HHHhCceEEEcchHHHHHHhcCcc--------ccccCccceeEEEEec
Confidence 8999999999999999999888 788999999999999998876422 1223567899999999
Q ss_pred CCCCHHHHHHHHHHh-CCccccccccccccccccccC-----CCCCCccccccccCCeEEEEeeC-CCCCCCCc-cceEE
Q 015313 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-----RGARKAGTVGNPLPGVQVKIAED-ESGSDAAG-VGEIC 384 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~-----~~~~~~~~~G~p~~~~~~~ivd~-~~~~~~~~-~Gel~ 384 (409)
+++++++.+.+.+.+ +..+++.||+||++.++.... ......+++|+|+++++++|+|+ ++++++.| .|||+
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 387 (537)
T PLN02246 308 APLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEIC 387 (537)
T ss_pred CcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEE
Confidence 999999999999998 678999999999986544321 11235678999999999999995 56778877 89999
Q ss_pred EeCcchhhhhcCCCcccchhh--cccC
Q 015313 385 VKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 385 v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
++|++++.|||++|+.|++.+ +|||
T Consensus 388 v~g~~~~~GY~~~~~~~~~~~~~~~~~ 414 (537)
T PLN02246 388 IRGPQIMKGYLNDPEATANTIDKDGWL 414 (537)
T ss_pred EECCchhccccCCchhhhhcccCCCCe
Confidence 999999999999999998884 6887
No 33
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1e-49 Score=395.69 Aligned_cols=366 Identities=22% Similarity=0.304 Sum_probs=292.6
Q ss_pred HHHHHhcccCCCeeEEEeCC--ccccHHHHHHHHHHHHHHHhh-CCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 5 KAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCS-NDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 5 ~~l~~~~~~~~~~~a~~~~~--~~~Ty~~l~~~~~~~a~~L~~-~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
+.+... +.+|+++|+++.. .++||+||.++++++|+.|.+ . |+++||+|+++++|++++
T Consensus 44 ~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~-----------------G~~~gd~V~i~~~n~~~~ 105 (560)
T PLN02574 44 SFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVM-----------------GVRQGDVVLLLLPNSVYF 105 (560)
T ss_pred HHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCcchH
Confidence 344444 5689999999854 379999999999999999998 5 889999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCC----ccc--
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE----TTV-- 155 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-- 155 (409)
+++++||+++|++++|+++..+.+++.++++.+++++++++.+..+.+... ....+.+......... ...
T Consensus 106 ~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PLN02574 106 PVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----GVPVIGVPENYDFDSKRIEFPKFYE 181 (560)
T ss_pred HHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----CCcEEecCcccccccCccCcccHHH
Confidence 999999999999999999999999999999999999999998776655432 1111111110000000 000
Q ss_pred -c-ccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh----cc-cCCCCeEEEecCchhHHHHHH
Q 015313 156 -F-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WE-YTSADQFLHCLPLHHVHGLFN 228 (409)
Q Consensus 156 -~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~-~~~~d~~l~~~pl~~~~g~~~ 228 (409)
. ............++++++++|||||||.||+|.++|+++...+..+... .. ...+++++..+|++|..|+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 261 (560)
T PLN02574 182 LIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSL 261 (560)
T ss_pred HhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHH
Confidence 0 0000111223356889999999999999999999999999877655431 22 235688999999999999877
Q ss_pred HHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEE
Q 015313 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (409)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v 308 (409)
.++.++..|+++++.+.+++..+++. +++|++|++.++|+++..+.+... .....+++++|.+
T Consensus 262 ~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~-------~~~~~~~~~lr~~ 324 (560)
T PLN02574 262 FVVGLLSLGSTIVVMRRFDASDMVKV----------IDRFKVTHFPVVPPILMALTKKAK-------GVCGEVLKSLKQV 324 (560)
T ss_pred HHHHHHhcCCEEEEecCCCHHHHHHH----------HHHcCCeEEecCCHHHHHHHhCcc-------ccccCccccceEE
Confidence 77788889999999999999999988 788999999999999999987521 1123467899999
Q ss_pred EeeCCCCCHHHHHHHHHHh-CCcccccccccccccccccc--CCCCCCccccccccCCeEEEEee-CCCCCCCCc-cceE
Q 015313 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAE-DESGSDAAG-VGEI 383 (409)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~--~~~~~~~~~~G~p~~~~~~~ivd-~~~~~~~~~-~Gel 383 (409)
++||+++++++.+++.+.+ ++++++.||+||++++.... .......+++|+|.++++++|+| +++++++.| .|||
T Consensus 325 ~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei 404 (560)
T PLN02574 325 SCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGEL 404 (560)
T ss_pred EEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEE
Confidence 9999999999999999988 68999999999998655422 12234567899999999999999 677888887 8999
Q ss_pred EEeCcchhhhhcCCCcccchhh--cccC
Q 015313 384 CVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 384 ~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
+|+|++++.|||++|+.|++.+ ||||
T Consensus 405 ~v~g~~~~~GY~~~~~~t~~~~~~~g~~ 432 (560)
T PLN02574 405 WIQGPGVMKGYLNNPKATQSTIDKDGWL 432 (560)
T ss_pred EEECcchhhhhcCChhHhhhhccCCCCc
Confidence 9999999999999999998874 7997
No 34
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.8e-50 Score=403.85 Aligned_cols=373 Identities=20% Similarity=0.280 Sum_probs=293.2
Q ss_pred HHHHHHhcccCCCeeEEEeCC------ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 4 ~~~l~~~~~~~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
.+.|.++++.+||++|+++.+ +.+||+||++++.++|+.|++. |+++||+|+++++|
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~-----------------Gv~~gd~V~i~~~n 132 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSL-----------------GVKKGDRVAIYMPM 132 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCC
Confidence 355777888899999999743 4799999999999999999994 99999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH---------HHHHHHhhccC-Ccee-ccCCC
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---------EVLQNVASKSG-AKFS-LIPPV 146 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~-~~~~-~~~~~ 146 (409)
+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... +.+........ .... .....
T Consensus 133 ~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (637)
T PRK00174 133 IPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRT 212 (637)
T ss_pred CHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCC
Confidence 9999999999999999999999999999999999999999999976532 22222222111 1111 11110
Q ss_pred CCCCCC--------cccc-ccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHH-HHhhcccCCCCeEEE
Q 015313 147 PNVSSE--------TTVF-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLH 216 (409)
Q Consensus 147 ~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~l~ 216 (409)
...... .... ............++++++|+|||||||.||+|.++|++++..... ....+++.++|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~ 292 (637)
T PRK00174 213 GGDVDWVEGRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWC 292 (637)
T ss_pred CCCcCcCCCCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEE
Confidence 000000 0000 000001122345689999999999999999999999998755433 344567888999999
Q ss_pred ecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhH
Q 015313 217 CLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT 292 (409)
Q Consensus 217 ~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~ 292 (409)
..|++|..++...++.+|..|+++++.+. +++..+++. ++++++|++.++|++++.+++....
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~--- 359 (637)
T PRK00174 293 TADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEV----------IDKHKVTIFYTAPTAIRALMKEGDE--- 359 (637)
T ss_pred cCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHH----------HHhcCCeEEeecHHHHHHHHhcCCc---
Confidence 99999999987778999999999999764 367888888 7889999999999999998875221
Q ss_pred HHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC---CccccccccccccccccccCC--CCCCccccccccCCeEEE
Q 015313 293 ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVK 367 (409)
Q Consensus 293 ~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~---~~v~~~YG~tE~g~~~~~~~~--~~~~~~~~G~p~~~~~~~ 367 (409)
.....++++||.+++||+++++++.+++.+.++ +++++.||+||+++.+..... ...+.+++|+|+++++++
T Consensus 360 ---~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~ 436 (637)
T PRK00174 360 ---HPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPA 436 (637)
T ss_pred ---ccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEE
Confidence 112346789999999999999999999998885 789999999999876543221 234567899999999999
Q ss_pred EeeCCCCCCCCc-cceEEEeC--cchhhhhcCCCcccchhh----cccC
Q 015313 368 IAEDESGSDAAG-VGEICVKS--PSLFKEYWKLPKESRTLS----SCLY 409 (409)
Q Consensus 368 ivd~~~~~~~~~-~Gel~v~g--~~~~~gY~~~~~~t~~~~----~g~~ 409 (409)
|+|++|++++.| .|||+++| |++++|||++|+.+.+.+ +|||
T Consensus 437 i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~ 485 (637)
T PRK00174 437 VVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMY 485 (637)
T ss_pred EECCCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEE
Confidence 999999999887 89999999 699999999999888763 7886
No 35
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=5.3e-50 Score=402.45 Aligned_cols=368 Identities=18% Similarity=0.207 Sum_probs=288.3
Q ss_pred HHHHHHhcccCCCeeEEEe------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 4 ~~~l~~~~~~~~~~~a~~~------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
.+.|.+++..+|+++|+++ ..+++||+||.++++++|++|++ +|+++||+|+++++|
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~Gd~V~i~~~n 117 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-----------------LGVGRGDRVLIYMPM 117 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 4567788888999999987 23689999999999999999999 499999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH---------HHHHHHHhhcc---CCceeccCC
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (409)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+....... ....+.+..
T Consensus 118 ~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 197 (628)
T TIGR02316 118 IAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDR 197 (628)
T ss_pred CHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999997642 22222222211 111222211
Q ss_pred CCCC-C--C--Cccccccc-----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHH-HHHHHhhcccCCCCeE
Q 015313 146 VPNV-S--S--ETTVFDQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ-VQMLTEAWEYTSADQF 214 (409)
Q Consensus 146 ~~~~-~--~--~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~ 214 (409)
.... . . .....+.. .........++++++|+|||||||.||||.++|.+++.. .......++++++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~ 277 (628)
T TIGR02316 198 GLAPMRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVM 277 (628)
T ss_pred CCCCcCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 1000 0 0 00000000 000111235689999999999999999999999998643 4445556788899999
Q ss_pred EEecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
++..|++|..++...++.+|+.|+++++.++ +++..+++. ++++++|+++++|++++.+.+....
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 346 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSI----------VERYGVRTMFSAPTAIRVLKKQDAA- 346 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc-
Confidence 9999999999987778999999999999874 367778887 7889999999999999988764211
Q ss_pred hHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccC----CCCCCccccccccCCeEE
Q 015313 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL----RGARKAGTVGNPLPGVQV 366 (409)
Q Consensus 291 ~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~----~~~~~~~~~G~p~~~~~~ 366 (409)
.....++++||.+++||+++++++.+++.+.++.++++.||+||++..+.... ......+++|+|+|++++
T Consensus 347 -----~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v 421 (628)
T TIGR02316 347 -----WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHL 421 (628)
T ss_pred -----ccccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceE
Confidence 12345688999999999999999999999999999999999999985433211 113456789999999999
Q ss_pred EEeeC-CCCCCCCc-cceEEEeCc---chhhhhcCCCcccchh
Q 015313 367 KIAED-ESGSDAAG-VGEICVKSP---SLFKEYWKLPKESRTL 404 (409)
Q Consensus 367 ~ivd~-~~~~~~~~-~Gel~v~g~---~~~~gY~~~~~~t~~~ 404 (409)
+|+|+ +|++++.| .|||+++|| +.+.|||++++.+.+.
T Consensus 422 ~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~ 464 (628)
T TIGR02316 422 RVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKT 464 (628)
T ss_pred EEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHh
Confidence 99998 68888877 899999998 5789999999988765
No 36
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=6.6e-50 Score=397.00 Aligned_cols=366 Identities=22% Similarity=0.311 Sum_probs=285.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCc----------cccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCE
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQK----------SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGAR 70 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~----------~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~ 70 (409)
+|+.+.|.+.++++||++|+++.+. ++||+||.++++++|++|.+. |+++||+
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~-----------------g~~~gd~ 68 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAA-----------------GIGRGMR 68 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCE
Confidence 4788899999999999999998654 899999999999999999994 8999999
Q ss_pred EEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh--HHHHHHHHhhccCCceeccCCC--
Q 015313 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPV-- 146 (409)
Q Consensus 71 V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 146 (409)
|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++++ ....+...........+.+...
T Consensus 69 V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 148 (552)
T PRK09274 69 AVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLL 148 (552)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccc
Confidence 999999999999999999999999999999999999999999999999999752 2222211110000001111100
Q ss_pred CCCCCCcccc-c-cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHH
Q 015313 147 PNVSSETTVF-D-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (409)
Q Consensus 147 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 224 (409)
.......... . ...........++++++++|||||||.||+|.++|+++...+......+++.++|+.++..|++|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 228 (552)
T PRK09274 149 WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF 228 (552)
T ss_pred cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh
Confidence 0000000000 0 0001112234568999999999999999999999999999988888888899999999999998754
Q ss_pred HHHHHHHHHHhcCCEEEEcc-------CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHH
Q 015313 225 GLFNALLAPLYAGATVEFMP-------KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (409)
Q Consensus 225 g~~~~~~~~l~~G~~i~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~ 297 (409)
+ +..|+++++.+ .+++..+++. ++++++|+++++|++++.+.+... .
T Consensus 229 ~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~--------~ 282 (552)
T PRK09274 229 G--------PALGMTSVIPDMDPTRPATVDPAKLFAA----------IERYGVTNLFGSPALLERLGRYGE--------A 282 (552)
T ss_pred h--------hhhCCeEEecCcccccccccCHHHHHHH----------HHHcCCeEEeccHHHHHHHHHHhh--------h
Confidence 3 34588887764 3567888888 788999999999999999987532 1
Q ss_pred hhhhhccceEEEeeCCCCCHHHHHHHHHHh--CCccccccccccccccccccCCC----------CCCccccccccCCeE
Q 015313 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAISNPLRG----------ARKAGTVGNPLPGVQ 365 (409)
Q Consensus 298 ~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~--~~~v~~~YG~tE~g~~~~~~~~~----------~~~~~~~G~p~~~~~ 365 (409)
...+++++|.+++||+++++++.+++.+.+ |+++++.||+||+++++...... .....++|+|+|+++
T Consensus 283 ~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 362 (552)
T PRK09274 283 NGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVE 362 (552)
T ss_pred cCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCce
Confidence 234678999999999999999999999999 47999999999998655422111 112347899999999
Q ss_pred EEEeeC---------CCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh----cc--cC
Q 015313 366 VKIAED---------ESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS----SC--LY 409 (409)
Q Consensus 366 ~~ivd~---------~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~----~g--~~ 409 (409)
++|+|+ ++++++.| .|||+++||+++.||||+|++|+..+ +| ||
T Consensus 363 ~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~ 422 (552)
T PRK09274 363 VRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWH 422 (552)
T ss_pred EEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEE
Confidence 999995 45667777 89999999999999999999998764 56 87
No 37
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-50 Score=406.83 Aligned_cols=357 Identities=20% Similarity=0.290 Sum_probs=291.8
Q ss_pred hHHHHHHHhccc--CCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSM--ARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~--~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
|+.+.|.++++. +||++|++.. +.+||+||+++++++|+.|.+. |+++|++|+|+++|++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~-----------------g~~~g~~V~i~~~~~~ 66 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNR-----------------GLSSGDRVLLCLPDSP 66 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCH
Confidence 577888888876 7999999875 4899999999999999999995 8999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccc
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (409)
+++++++||+++|++++|+++.++.+++.++++.++++++|++.+....+... ..... ..... .... .
T Consensus 67 ~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~---~~~~~--~~~~-~ 134 (705)
T PRK06060 67 DLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------RVAEA---AELMS--EAAR-V 134 (705)
T ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc------ccchh---hhhhh--hccc-c
Confidence 99999999999999999999999999999999999999999987654433210 00000 00000 0000 0
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHH-hhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCC
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~ 238 (409)
.........++++++++|||||||.||+|.++|+++...+.... ..+.+...|++++..|++|..++...++.++..|+
T Consensus 135 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~ 214 (705)
T PRK06060 135 APGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGG 214 (705)
T ss_pred CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCC
Confidence 00011123568899999999999999999999999988776654 45778889999999999999887666888999999
Q ss_pred EEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCH
Q 015313 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (409)
Q Consensus 239 ~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~ 317 (409)
++++.+ .+++..++.. ++++++|+++++|+++..+++... ...++++|.+++||+++++
T Consensus 215 ~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~----------~~~~~slr~i~~gGe~l~~ 274 (705)
T PRK06060 215 SAVINSAPVTPEAAAIL----------SARFGPSVLYGVPNFFARVIDSCS----------PDSFRSLRCVVSAGEALEL 274 (705)
T ss_pred EEEEeCCCCCHHHHHHH----------HHhcCCeEEeeHHHHHHHHHHhcc----------cccccceeEEEEecCcCCH
Confidence 999987 4667666666 778999999999999998876421 2346789999999999999
Q ss_pred HHHHHHHHHh-CCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhc
Q 015313 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (409)
Q Consensus 318 ~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~ 395 (409)
++.+++.+.+ ++++++.||+||++.............+++|+|+++++++|+|+++++++.| .||||++|++++.|||
T Consensus 275 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g~~v~~GY~ 354 (705)
T PRK06060 275 GLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRGPAIAKGYW 354 (705)
T ss_pred HHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEccchhhhhhh
Confidence 9999999998 5899999999999865543332334567899999999999999999998888 8999999999999999
Q ss_pred CCCcccchhhcccC
Q 015313 396 KLPKESRTLSSCLY 409 (409)
Q Consensus 396 ~~~~~t~~~~~g~~ 409 (409)
|+|+.+.. .+|||
T Consensus 355 ~~~~~~~~-~~~~~ 367 (705)
T PRK06060 355 NRPDSPVA-NEGWL 367 (705)
T ss_pred CCCccccc-CCCcE
Confidence 99998753 57887
No 38
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-49 Score=389.19 Aligned_cols=368 Identities=19% Similarity=0.309 Sum_probs=304.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
||+.+.|.++++.+|+++|++++++++||.||.+++.++|..|.+. |+++|++|+++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~~~~v~i~~~~~~~ 64 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHAR-----------------GIGQGDVVALLMKNSAA 64 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 6899999999999999999999999999999999999999999994 88999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCcccccc-c
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQ-S 159 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (409)
++++++||+++|++++|+++..+.+++.++++.+++++++++++........ .....+..... ......... .
T Consensus 65 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~ 138 (497)
T PRK06145 65 FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE-----TPKIVIDAAAQ-ADSRRLAQGGL 138 (497)
T ss_pred HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc-----cceEEecCccc-chhHHHhccCC
Confidence 9999999999999999999999999999999999999999997765432110 11111111000 000000000 0
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
.........++++++++|||||||.||+|.++|+++..........++...+++++...|++|..++....+.++..|++
T Consensus 139 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~ 218 (497)
T PRK06145 139 EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGT 218 (497)
T ss_pred CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCE
Confidence 00112234678999999999999999999999999987666666677888999999999999999987767788999999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+.+++..+++. ++++++|.+.++|+++..++..... ...+++++|.+++||+++++++
T Consensus 219 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~ll~~~~~--------~~~~~~~l~~~~~gG~~~~~~~ 280 (497)
T PRK06145 219 LRIHREFDPEAVLAA----------IERHRLTCAWMAPVMLSRVLTVPDR--------DRFDLDSLAWCIGGGEKTPESR 280 (497)
T ss_pred EEECCcCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHcCCCc--------cccccccceEEEecCCCCCHHH
Confidence 999999999999988 7789999999999999999875221 2235678999999999999999
Q ss_pred HHHHHHHh-CCccccccccccccccccccCC--CCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhc
Q 015313 320 MQQWETIT-GHRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (409)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~--~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~ 395 (409)
.+.+.+.| +.++++.||+||+++..+.... .....+++|+|+++++++++|++++.++.+ .|||+++|++++.|||
T Consensus 281 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~~~Gy~ 360 (497)
T PRK06145 281 IRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRGPKVTKGYW 360 (497)
T ss_pred HHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEECcchhhhhc
Confidence 99999988 6789999999999875443221 223567899999999999999999888877 8999999999999999
Q ss_pred CCCcccchh-hcccC
Q 015313 396 KLPKESRTL-SSCLY 409 (409)
Q Consensus 396 ~~~~~t~~~-~~g~~ 409 (409)
++++.|++. .+|||
T Consensus 361 ~~~~~~~~~~~~~~~ 375 (497)
T PRK06145 361 KDPEKTAEAFYGDWF 375 (497)
T ss_pred CChHHHHHHHhCCCe
Confidence 999999888 68887
No 39
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-49 Score=395.39 Aligned_cols=374 Identities=24% Similarity=0.344 Sum_probs=303.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.++++++++|+++|++++++.+||.||+++++++|+.|.+. |+++||+|+++++|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~-----------------gi~~gd~V~l~~~n~~~ 94 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRAL-----------------GVRPGDRVAIVLPNCPQ 94 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCCHH
Confidence 4688899999999999999999999999999999999999999984 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCC-CC------------
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP-VP------------ 147 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------ 147 (409)
++++++||+++|++++|+++.++.+++.+++++++++++|++++....+..+........++... ..
T Consensus 95 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 174 (573)
T PRK05605 95 HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRL 174 (573)
T ss_pred HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccc
Confidence 99999999999999999999999999999999999999999887766555443322211111000 00
Q ss_pred ---CCC-----------CCcccc---cc-chh----hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh
Q 015313 148 ---NVS-----------SETTVF---DQ-SQA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA 205 (409)
Q Consensus 148 ---~~~-----------~~~~~~---~~-~~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 205 (409)
... ...... .. ... ........+++++++|||||||.||+|.++|+++...+......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 254 (573)
T PRK05605 175 PIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAW 254 (573)
T ss_pred ccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhh
Confidence 000 000000 00 000 11122456899999999999999999999999998777654433
Q ss_pred cc--cCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHH
Q 015313 206 WE--YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 206 ~~--~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l 283 (409)
.. ...++++++.+|++|..|+...+..++..|+++++.+.+++..+++. ++++++|++.++|.+++.+
T Consensus 255 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l 324 (573)
T PRK05605 255 VPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDA----------MKKHPPTWLPGVPPLYEKI 324 (573)
T ss_pred ccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH----------HHHhCCEEEEchHHHHHHH
Confidence 22 23478999999999999987778888999999999998899999888 7789999999999999999
Q ss_pred HHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccC-CCCCCccccccccC
Q 015313 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLP 362 (409)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~ 362 (409)
.+.... ....++++|.+++||+++++++.+++.+.++.++++.||+||+++++.... ......+++|.|++
T Consensus 325 ~~~~~~--------~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~ 396 (573)
T PRK05605 325 AEAAEE--------RGVDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFP 396 (573)
T ss_pred HhCccc--------cCCCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCC
Confidence 875322 223567899999999999999999999988999999999999987655432 22345678999999
Q ss_pred CeEEEEeeCCC--CCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 363 GVQVKIAEDES--GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 363 ~~~~~ivd~~~--~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+++++|+|+++ ++++.| .|||+++|+.++.||+++|+.|++. .+|||
T Consensus 397 ~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 447 (573)
T PRK05605 397 DTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWF 447 (573)
T ss_pred CCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCc
Confidence 99999999775 677777 8999999999999999999999988 67787
No 40
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2.1e-49 Score=391.07 Aligned_cols=374 Identities=19% Similarity=0.245 Sum_probs=303.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.++++.+|+++|++++++.+||+||.++++++|..|.+. |+++|++|+++++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~~~~~ 85 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKL-----------------GIGQGDTAVVQLPNIAE 85 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCcHH
Confidence 3678899999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH-----HHHHHHhhccC-CceeccCCCCC-CCCCc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPN-VSSET 153 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 153 (409)
++++++||+++|++++++++..+.+++.++++.+++++++++.... ........... ........... .....
T Consensus 86 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (527)
T TIGR02275 86 FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELF 165 (527)
T ss_pred HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhh
Confidence 9999999999999999999999999999999999999999986532 11222211111 11111111000 00000
Q ss_pred c-ccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH-HHH
Q 015313 154 T-VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALL 231 (409)
Q Consensus 154 ~-~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~ 231 (409)
. ..............++++++++|||||||.||+|.++|+++...+......+.++.+|+++..+|++|.+++.. .++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 166 LWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred HHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHH
Confidence 0 00000011122346789999999999999999999999999998888888888899999999999999998864 478
Q ss_pred HHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEee
Q 015313 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (409)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~g 311 (409)
.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+..+. ...+++++|.+++|
T Consensus 246 ~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~lr~~~~g 307 (527)
T TIGR02275 246 GVFYAGGCVVLAPDPSPTDCFPL----------IERHKVTVTALVPPAVALWMQAASK--------SRYDLSSLKLLQVG 307 (527)
T ss_pred HHHhcCCeEEECCCCCHHHHHHH----------HHHhCCeEEEecHHHHHHHHhCccc--------cCCCccceEEEEEc
Confidence 88999999999988889888887 7889999999999999988875321 23457789999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccccccccccccc-CCCCCCcccccccc-CCeEEEEeeCCCCCCCCc-cceEEEeCc
Q 015313 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSP 388 (409)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~-~~~~~~~~~~G~p~-~~~~~~ivd~~~~~~~~~-~Gel~v~g~ 388 (409)
|++++.++.+++.+.++.++++.||+||++...... .......+++|+|+ ++.+++|+|++|++++.| .|||+++|+
T Consensus 308 G~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~g~ 387 (527)
T TIGR02275 308 GAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTRGP 387 (527)
T ss_pred CCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEecCC
Confidence 999999999999999999999999999966433321 12233456899999 588999999999988887 899999999
Q ss_pred chhhhhcCCCcccchhh--cccC
Q 015313 389 SLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
+++.|||++|+.|++.+ ||||
T Consensus 388 ~~~~gY~~~~~~~~~~~~~dg~~ 410 (527)
T TIGR02275 388 YTFRGYYKAPEHNAAAFDAEGFY 410 (527)
T ss_pred ccchhhcCChhHhHhhcCcCCCE
Confidence 99999999999998884 7887
No 41
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-49 Score=389.45 Aligned_cols=373 Identities=24% Similarity=0.308 Sum_probs=311.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.+.++.+||++|+++.++.+||+||++++.++|..|.+. |+++|++|+++++|++++
T Consensus 12 ~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~~~~V~l~~~~~~~~ 74 (523)
T PRK08316 12 TIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDL-----------------GLKKGDRVAALGHNSDAY 74 (523)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHH
Confidence 578899999999999999999999999999999999999999995 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCC----CCcccc-
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS----SETTVF- 156 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~- 156 (409)
+++++||+++|++++|+++..+.+++..+++.+++++++++++....+.+...........+....... ......
T Consensus 75 ~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (523)
T PRK08316 75 ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFAD 154 (523)
T ss_pred HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHH
Confidence 999999999999999999999999999999999999999998877766554333221111111100000 000000
Q ss_pred --c-cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 015313 157 --D-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (409)
Q Consensus 157 --~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~ 233 (409)
. ............+++++++|||||||.||+|.++|+++..........+++.++|++++.+|++|..++...+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 234 (523)
T PRK08316 155 WAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPY 234 (523)
T ss_pred HHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHH
Confidence 0 0000112234568899999999999999999999999999888888888899999999999999999986667778
Q ss_pred HhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCC
Q 015313 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (409)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~ 313 (409)
+..|+++++.+..++..+++. ++++++|++.++|.++..+++... ....+++++|.+++||+
T Consensus 235 ~~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gg~ 296 (523)
T PRK08316 235 LYVGATNVILDAPDPELILRT----------IEAERITSFFAPPTVWISLLRHPD--------FDTRDLSSLRKGYYGAS 296 (523)
T ss_pred HhcCceEEEecCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHcCcc--------cccCCcccceEEEEcCC
Confidence 899999999988899999888 788999999999999999887522 23346789999999999
Q ss_pred CCCHHHHHHHHHHh-CCccccccccccccccccccC--CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcc
Q 015313 314 ALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPS 389 (409)
Q Consensus 314 ~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~--~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~ 389 (409)
+++.++.+.+++.+ ++++++.||+||++.+..... ......+++|+|+++++++|+|+++++++.| .|||+++|++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~~~~ 376 (523)
T PRK08316 297 IMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHRSPQ 376 (523)
T ss_pred cCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEECCc
Confidence 99999999999988 789999999999987654322 2234567899999999999999999998888 8999999999
Q ss_pred hhhhhcCCCcccchh-hcccC
Q 015313 390 LFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 390 ~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++.||+++++.+++. .+|||
T Consensus 377 ~~~~y~~~~~~~~~~~~~~~~ 397 (523)
T PRK08316 377 LMLGYWDDPEKTAEAFRGGWF 397 (523)
T ss_pred hhhhhcCCHHHHHHHhhCCCe
Confidence 999999999999988 68887
No 42
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=5.9e-49 Score=388.87 Aligned_cols=373 Identities=23% Similarity=0.304 Sum_probs=303.7
Q ss_pred hHHHHHHHhcccCCCeeEEEe------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEe
Q 015313 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~ 75 (409)
++.+.+.++++.+|+++|++. ....+||+||++++.++|..|.+. |+++|++|++++
T Consensus 23 ~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~ 85 (538)
T TIGR03208 23 TINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARL-----------------GVGRGDVVSFQL 85 (538)
T ss_pred cHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEC
Confidence 678899999999999999986 246899999999999999999984 899999999999
Q ss_pred CCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH-----HHHHHHhhccCC-ceeccCCCCCC
Q 015313 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSGA-KFSLIPPVPNV 149 (409)
Q Consensus 76 ~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~ 149 (409)
+|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.+. ............ ...........
T Consensus 86 ~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (538)
T TIGR03208 86 PNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGD 165 (538)
T ss_pred CCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCC
Confidence 999999999999999999999999999999999999999999999987542 112222111111 11111111000
Q ss_pred CCCccc------cccch---hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCc
Q 015313 150 SSETTV------FDQSQ---AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPL 220 (409)
Q Consensus 150 ~~~~~~------~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl 220 (409)
...... ..... ........++++++++|||||||.||+|.++|+++...+......++++.+|++++.+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 245 (538)
T TIGR03208 166 DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPM 245 (538)
T ss_pred cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCc
Confidence 000000 00000 001123456899999999999999999999999999988888888888899999999999
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhh
Q 015313 221 HHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASAS 300 (409)
Q Consensus 221 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~ 300 (409)
+|..+++..++.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+..+. ...
T Consensus 246 ~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~~--------~~~ 307 (538)
T TIGR03208 246 AHQTGFMYGLMMPLILNATAVLQDIWNPARAAEL----------IRETGVTFTMASTPFLTDLCRAVKE--------SGA 307 (538)
T ss_pred hhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHH----------HHHhCCeEEecCHHHHHHHHhchhc--------cCC
Confidence 9999988888999999999999998899999998 7889999999999999988765321 123
Q ss_pred hhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC--CCCccccccccCCeEEEEeeCCCCCCCC
Q 015313 301 AAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAA 378 (409)
Q Consensus 301 ~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~--~~~~~~~G~p~~~~~~~ivd~~~~~~~~ 378 (409)
+++++|.+++||+++++++.+++.+.+++++++.||+||++++....... .....++|+|+++++++|+|+++++++.
T Consensus 308 ~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~ 387 (538)
T TIGR03208 308 PVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQ 387 (538)
T ss_pred CCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcC
Confidence 56789999999999999999999998999999999999998765543321 1224578999999999999999988888
Q ss_pred c-cceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 379 G-VGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 379 ~-~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
| .|||+++|++++.|||++|+.|+...||||
T Consensus 388 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~ 419 (538)
T TIGR03208 388 GETGRLLVRGCSNFGGYLKRPHLNSTDAEGWF 419 (538)
T ss_pred CCCcEEEEecCcccccccCCcccccccCCCce
Confidence 7 799999999999999999999887688997
No 43
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-49 Score=388.91 Aligned_cols=359 Identities=22% Similarity=0.301 Sum_probs=299.2
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
|++.+.|+++++.+||++|+.+.++++||.||.++++++|++|.+. | .+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------~-~~~~~v~i~~~~~~~ 62 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEK-----------------E-SKNKTIAILLENRIE 62 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHh-----------------C-CCCCEEEEEcCCCHH
Confidence 7899999999999999999999999999999999999999999984 5 479999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccch
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
++++++||+++|++++|+++..+.+++.++++.+++++++++......+... ....+.+....... .....
T Consensus 63 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~~ 133 (487)
T PRK07638 63 FLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE----EGRVIEIDEWKRMI-----EKYLP 133 (487)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc----cceEEEehhhhhhh-----hhccc
Confidence 9999999999999999999999999999999999999999998654433211 11111111110000 00000
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEE
Q 015313 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (409)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i 240 (409)
.........+++++|+|||||||.||+|.++|++++..+......+++.++|+++...|++|..++ ..++.++..|+++
T Consensus 134 ~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~ 212 (487)
T PRK07638 134 TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTV 212 (487)
T ss_pred cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEE
Confidence 011112234678999999999999999999999999988888888889999999999999998876 4688899999999
Q ss_pred EEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHH
Q 015313 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (409)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~ 320 (409)
++.+.+++..+++. ++++++|++.++|+++..+.+... ...+.+.++++|++++.++.
T Consensus 213 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~------------~~~~~~~~~~~G~~l~~~~~ 270 (487)
T PRK07638 213 HLMRKFIPNQVLDK----------LETENISVMYTVPTMLESLYKENR------------VIENKMKIISSGAKWEAEAK 270 (487)
T ss_pred EEcCCCCHHHHHHH----------HHHcCCeEEEeCcHHHHHHHhCcC------------cCCceeEEEEcCCCCCHHHH
Confidence 99999999999988 788999999999999999987511 12345667788999999999
Q ss_pred HHHHHHh-CCccccccccccccccccccC-CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCC
Q 015313 321 QQWETIT-GHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 321 ~~~~~~~-~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
+++.+.+ ++++++.||+||++.+..... ......+++|.|+++++++|+|++|++++.| .|||+++|+.++.|||++
T Consensus 271 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~~~~gy~~~ 350 (487)
T PRK07638 271 EKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKSPQFFMGYIIG 350 (487)
T ss_pred HHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEecccceeeecCC
Confidence 9999998 789999999999987655432 2344677899999999999999999999888 899999999999999999
Q ss_pred Ccccchh-hcccC
Q 015313 398 PKESRTL-SSCLY 409 (409)
Q Consensus 398 ~~~t~~~-~~g~~ 409 (409)
++.+++. .+|||
T Consensus 351 ~~~~~~~~~~g~~ 363 (487)
T PRK07638 351 GVLARELNADGWM 363 (487)
T ss_pred HHHHhhhccCCcE
Confidence 9988876 78887
No 44
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.8e-49 Score=386.46 Aligned_cols=357 Identities=25% Similarity=0.345 Sum_probs=300.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
||+.+.|.+++..+||++|+++.++.+||+||+++++++|+.|.+. |+++||+|+++++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~~~~v~i~~~~~~~ 64 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAAL-----------------GVKKGDRVALLMKNGME 64 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 7899999999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccch
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
++++++|++++|++++|+++..+.+++..+++++++++++++............. .+....... ...
T Consensus 65 ~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~-------~~~ 131 (483)
T PRK03640 65 MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGISV------KFAELMNGP-------KEE 131 (483)
T ss_pred HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhccc------cHHHHhhcc-------ccc
Confidence 9999999999999999999999999999999999999999988665443322110 000000000 000
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEE
Q 015313 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (409)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i 240 (409)
........++++++++|||||||.||+|.++|.++...+......++++.+|++++.+|++|..++.. ++.++..|+++
T Consensus 132 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~ 210 (483)
T PRK03640 132 AEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSI-LMRSVIYGMRV 210 (483)
T ss_pred CCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHH-HHHHHhcCCEE
Confidence 01112235688999999999999999999999999888777777788999999999999999999854 78889999999
Q ss_pred EEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHH
Q 015313 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (409)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~ 320 (409)
++.+..++..+++. ++++++|++.++|+++..+.+..... ....++|.+++||+++++.+.
T Consensus 211 ~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~~~---------~~~~~lr~~~~~g~~~~~~~~ 271 (483)
T PRK03640 211 VLVEKFDAEKINKL----------LQTGGVTIISVVSTMLQRLLERLGEG---------TYPSSFRCMLLGGGPAPKPLL 271 (483)
T ss_pred EecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcCcc---------ccCCcceEEEEcCCCCCHHHH
Confidence 99999999999998 77899999999999999998653211 234689999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccc--cCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCC
Q 015313 321 QQWETITGHRLLERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 321 ~~~~~~~~~~v~~~YG~tE~g~~~~~--~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
+.+.+. ++++++.||+||++..+.. ........+++|+|+++++++|.|++ ++++.+ .|||+++||+++.||+++
T Consensus 272 ~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~Gel~v~g~~~~~gy~~~ 349 (483)
T PRK03640 272 EQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEEGEIVVKGPNVTKGYLNR 349 (483)
T ss_pred HHHHHh-CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCceEEEEECcchhhhhcCC
Confidence 988875 9999999999998754332 22234567899999999999999864 777777 899999999999999999
Q ss_pred Ccccchh-hcccC
Q 015313 398 PKESRTL-SSCLY 409 (409)
Q Consensus 398 ~~~t~~~-~~g~~ 409 (409)
|+.+++. .+|||
T Consensus 350 ~~~~~~~~~~~~~ 362 (483)
T PRK03640 350 EDATRETFQDGWF 362 (483)
T ss_pred HHHHHHHHhcCCe
Confidence 9999887 67887
No 45
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-49 Score=392.62 Aligned_cols=370 Identities=21% Similarity=0.292 Sum_probs=286.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeC--CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|.+. |+++|++|+++++|++
T Consensus 15 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~~~~ 77 (540)
T PRK05857 15 TVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQ-----------------SVSRGSRVLVISDNGP 77 (540)
T ss_pred chHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHh-----------------CcCCCCEEEEEcCCCH
Confidence 5788999999999999999863 36899999999999999999994 8999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-CceeccCCCCCCCCCcccccc
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AKFSLIPPVPNVSSETTVFDQ 158 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 158 (409)
+++++++||+++|++++|+++.++.+++.++++.++++.+++++........+..... ...+.+...............
T Consensus 78 e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (540)
T PRK05857 78 ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDA 157 (540)
T ss_pred HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccc
Confidence 9999999999999999999999999999999999999999999865432221111110 111111110000000000000
Q ss_pred chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHh----hcccCCCCeEEEecCchhHHHHHHHHHHHH
Q 015313 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (409)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l 234 (409)
..........++++++++|||||||.||+|.++|+++.+....... .+....+++.+..+|++|..+++. .+.++
T Consensus 158 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~-~~~~l 236 (540)
T PRK05857 158 ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWW-ILTCL 236 (540)
T ss_pred cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHH-HHHHh
Confidence 0011122346689999999999999999999999999876544322 234556789999999999999864 77889
Q ss_pred hcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCC
Q 015313 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (409)
Q Consensus 235 ~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~ 314 (409)
..|+++++ ...++..+++. ++++++|.++++|.++..+.+.... ...+++++|.+++||++
T Consensus 237 ~~G~~~v~-~~~~~~~~~~~----------i~~~~it~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG~~ 297 (540)
T PRK05857 237 MHGGLCVT-GGENTTSLLEI----------LTTNAVATTCLVPTLLSKLVSELKS--------ANATVPSLRLVGYGGSR 297 (540)
T ss_pred hcceeEEe-cCCChhHHHHH----------HHhcCcceEEeChHHHHHHHhcccc--------CCCcCccceEEEEcCcc
Confidence 99999876 44577788887 8889999999999999999875321 22467899999999999
Q ss_pred CCHHHHHHHHHHhCCccccccccccccccccccCCC-----CCCccccccccCCeEEEEeeCCCCC-C-----CCc-cce
Q 015313 315 LPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----ARKAGTVGNPLPGVQVKIAEDESGS-D-----AAG-VGE 382 (409)
Q Consensus 315 ~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~-----~~~~~~~G~p~~~~~~~ivd~~~~~-~-----~~~-~Ge 382 (409)
++....+ +.+.+++++++.||+||++......+.. ....+++|+|++|++++|+|+++.. + +.+ .||
T Consensus 298 ~~~~~~~-~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Ge 376 (540)
T PRK05857 298 AIAADVR-FIEATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGT 376 (540)
T ss_pred CCchhHH-HHHHhCCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcce
Confidence 9988875 5567799999999999998644322211 2245789999999999999988763 2 234 799
Q ss_pred EEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 383 ICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 383 l~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
|+|+||+++.|||++|++|++. .||||
T Consensus 377 l~v~g~~~~~GY~~~~~~t~~~~~~g~~ 404 (540)
T PRK05857 377 LWIKSPANMLGYWNNPERTAEVLIDGWV 404 (540)
T ss_pred EEEeCcchhhhhhCCccchhhhcCCCce
Confidence 9999999999999999999988 79997
No 46
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-49 Score=387.81 Aligned_cols=375 Identities=22% Similarity=0.267 Sum_probs=296.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC--ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~--~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.|.++++++||++|+++.+ +++||+||.++++++|+.|.+ +|+++||+|+++++|++
T Consensus 17 ~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~gd~V~i~~~n~~ 79 (534)
T PRK05852 17 RIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTR-----------------SGLLPGDRVALRMGSNA 79 (534)
T ss_pred cHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCcH
Confidence 57889999999999999998743 579999999999999999999 48999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCC--Cc-cc-
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSS--ET-TV- 155 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~- 155 (409)
+++++++||+++|++++|+++.++.+++.++++.++++++|++.+..................+........ .. ..
T Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (534)
T PRK05852 80 EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLD 159 (534)
T ss_pred HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccc
Confidence 999999999999999999999999999999999999999999864332111100000000011110000000 00 00
Q ss_pred --cccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 015313 156 --FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (409)
Q Consensus 156 --~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~ 233 (409)
..............++.++++|||||||.||+|.++|+++...+......+.+..+|++++..|++|..+++..++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 239 (534)
T PRK05852 160 AATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLAT 239 (534)
T ss_pred cccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHH
Confidence 000000011112346789999999999999999999999999998888888899999999999999999998888999
Q ss_pred HhcCCEEEEcc--CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEee
Q 015313 234 LYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (409)
Q Consensus 234 l~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~g 311 (409)
+..|+++++.+ .+++..+++. ++++++|.++++|.++..+.+..... ....+.+++|.+.++
T Consensus 240 l~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~~ 303 (534)
T PRK05852 240 LASGGAVLLPARGRFSAHTFWDD----------IKAVGATWYTAVPTIHQILLERAATE------PSGRKPAALRFIRSC 303 (534)
T ss_pred HhcCCeEEeCCCcCcCHHHHHHH----------HHHcCCcEEEcChHHHHHHHhhcccc------cccccCCCeeEEEEC
Confidence 99999999865 4678888888 78899999999999999998753211 112356789999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccccCC-----CCCCccccccc--cCCeEEEEeeCCCCCCCCc-cceE
Q 015313 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-----GARKAGTVGNP--LPGVQVKIAEDESGSDAAG-VGEI 383 (409)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~-----~~~~~~~~G~p--~~~~~~~ivd~~~~~~~~~-~Gel 383 (409)
|+++++++++.+.+.+++++++.||+||++..++.... ......++|.+ .++++++|+|+++++++.| .|||
T Consensus 304 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g~~~~~g~~Gel 383 (534)
T PRK05852 304 SAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGLPLPAGAVGEV 383 (534)
T ss_pred CCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCCCCCCCCCceEE
Confidence 99999999999999999999999999999866553221 11112234444 6999999999999998887 8999
Q ss_pred EEeCcchhhhhcCCCcccchh-hcccC
Q 015313 384 CVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 384 ~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+++|++++.|||++|+.|++. .||||
T Consensus 384 ~v~g~~v~~gY~~~~~~t~~~~~~g~~ 410 (534)
T PRK05852 384 WLRGTTVVRGYLGDPTITAANFTDGWL 410 (534)
T ss_pred EEecCcccchhcCCcccchhhhcCCCc
Confidence 999999999999999999988 68897
No 47
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=6.9e-49 Score=388.16 Aligned_cols=370 Identities=22% Similarity=0.338 Sum_probs=304.6
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|+++++.+||++|+++.++.+||+||++++.++|..|.+. |+++|++|+++++|+++
T Consensus 21 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~-----------------gi~~g~~V~v~~~n~~~ 83 (542)
T PRK06155 21 RTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAA-----------------GVKRGDRVALMCGNRIE 83 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCChH
Confidence 3678899999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhcc-CC-ceeccCCCCCCC---CC--c
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKS-GA-KFSLIPPVPNVS---SE--T 153 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~---~~--~ 153 (409)
++++++||+++|++++|+++.++.+++..+++++++++++++.+....+....... .. ..+.+....... .. .
T Consensus 84 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (542)
T PRK06155 84 FLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTA 163 (542)
T ss_pred HHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchh
Confidence 99999999999999999999999999999999999999999988777665543321 11 111111110000 00 0
Q ss_pred cccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 015313 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (409)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~ 233 (409)
...............++++++++|||||||.||+|.++|+++..........+++++.+++++.+|++|..++. .++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~~~ 242 (542)
T PRK06155 164 PLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFFQA 242 (542)
T ss_pred hhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHHHH
Confidence 00000000111234568999999999999999999999999988877777778899999999999999999986 47899
Q ss_pred HhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCC
Q 015313 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (409)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~ 313 (409)
+..|+++++.+.+++..++.. ++++++|++.++|.++..+.+.... .....+++|.++.||
T Consensus 243 l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~l~~~~~g~- 303 (542)
T PRK06155 243 LLAGATYVLEPRFSASGFWPA----------VRRHGATVTYLLGAMVSILLSQPAR--------ESDRAHRVRVALGPG- 303 (542)
T ss_pred HHcCceEEeeCCCCHHHHHHH----------HHHhCCcEEEchHHHHHHHHcCcCc--------cccccCceEEEEEcC-
Confidence 999999999999999999998 7789999999999999988775322 123456788887655
Q ss_pred CCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCc---c
Q 015313 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP---S 389 (409)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~---~ 389 (409)
+++++.+.+++.+++++++.||+||++.++.... .....+++|.|.++++++|+|+++++++.| .|||+++|+ +
T Consensus 304 -~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~~~~~ 381 (542)
T PRK06155 304 -VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTH-GSQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRADEPFA 381 (542)
T ss_pred -CCHHHHHHHHHHcCCCEEeeecccccCccccCCC-CCCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCCccc
Confidence 5789999999999999999999999987665432 234677899999999999999999999888 899999998 6
Q ss_pred hhhhhcCCCcccchh-hcccC
Q 015313 390 LFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 390 ~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++.|||++++.|++. .+|||
T Consensus 382 ~~~GY~~~~~~~~~~~~~~~~ 402 (542)
T PRK06155 382 FATGYFGMPEKTVEAWRNLWF 402 (542)
T ss_pred cchhhcCCHHHHHHhhcCCcE
Confidence 999999999999888 68887
No 48
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-50 Score=353.15 Aligned_cols=373 Identities=20% Similarity=0.257 Sum_probs=314.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++|.++||++|++++++.|||+||.+++.++|..|.+ +|+++||+|.+.+||..+|
T Consensus 29 ~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~-----------------lGi~~Gd~vlvQLpN~~ef 91 (542)
T COG1021 29 TLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRR-----------------LGIKPGDTVLVQLPNVAEF 91 (542)
T ss_pred cHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCchHHH
Confidence 57789999999999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh-----HHHHHHHHhhccCCceeccCCCCCCCC--Ccc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-----YREVLQNVASKSGAKFSLIPPVPNVSS--ETT 154 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 154 (409)
++++||++++|+.+|..-|.....++.++.+.+.++.+|.+.. +.++..++..+......++........ ...
T Consensus 92 ~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~ 171 (542)
T COG1021 92 YITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEA 171 (542)
T ss_pred HHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhh
Confidence 9999999999999999889999999999999999999998863 345555555554432222222211111 000
Q ss_pred cccc--chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHH-HHHH
Q 015313 155 VFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF-NALL 231 (409)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~-~~~~ 231 (409)
.... ......++.++++++++..+.||||.||-+..||.....+++.-.+.++++..+++++.+|..|-+-+. =+.+
T Consensus 172 ~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 172 ALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred hhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchh
Confidence 0000 111123445678899999999999999999999999999888888999999999999999999877552 2467
Q ss_pred HHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEee
Q 015313 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (409)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~g 311 (409)
..+..|+++|+.+..+++.-+.. |++|+||+..++|.+...+++..+ ....+++|||.+.+|
T Consensus 252 Gv~~agG~VVla~~psp~~~F~l----------Ierh~Vt~tALVPpla~LWlqa~e--------~~~~~LsSLrllQVG 313 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPL----------IERHGVTVTALVPPLASLWLQAAE--------WERADLSSLRLLQVG 313 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHH----------HHHhccceEEeccHHHHHHHHhhh--------cccCCchheeEEeec
Confidence 88999999999999999999998 899999999999999999998743 356789999999999
Q ss_pred CCCCCHHHHHHHHHHhCCcccccccccccccccccc-CCCCCCcccccccc-CCeEEEEeeCCCCCCCCc-cceEEEeCc
Q 015313 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSP 388 (409)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~-~~~~~~~~~~G~p~-~~~~~~ivd~~~~~~~~~-~Gel~v~g~ 388 (409)
|+.+++.+.+++...+||.+-+.|||.|.-...+.- +.......+.|+|+ |.-+++|+|.+|+++++| +|+|..|||
T Consensus 314 Garl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~LltRGP 393 (542)
T COG1021 314 GARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLTRGP 393 (542)
T ss_pred CcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeeecCC
Confidence 999999999999999999999999999987655532 22345567899998 778999999999999888 899999999
Q ss_pred chhhhhcCCCcccchh--hcccC
Q 015313 389 SLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
..++|||+.|++|+++ -||+|
T Consensus 394 YTirGYyrap~HNa~aF~a~GFY 416 (542)
T COG1021 394 YTIRGYYRAPEHNARAFDADGFY 416 (542)
T ss_pred eeeeeeccCchhhhhccCcCCce
Confidence 9999999999999999 56766
No 49
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-49 Score=387.30 Aligned_cols=373 Identities=24% Similarity=0.382 Sum_probs=313.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.+.++.+|+++|+.+.++.+||+||+++++++|+.|.+. |+++|++|+++++|+++
T Consensus 6 ~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------g~~~~~~V~l~~~~~~~ 68 (521)
T PRK06187 6 LTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRAL-----------------GVKKGDRVAVFDWNSHE 68 (521)
T ss_pred CCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 4688999999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC--ceeccCCCCC------CCCC
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPN------VSSE 152 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ 152 (409)
++++++||+++|++++|+++..+.+++..+++.+++++++++.+..+.+.++...... .......... ....
T Consensus 69 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (521)
T PRK06187 69 YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEY 148 (521)
T ss_pred HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccH
Confidence 9999999999999999999999999999999999999999999888777776554432 1222211110 0000
Q ss_pred ccccc-cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHH
Q 015313 153 TTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (409)
Q Consensus 153 ~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~ 231 (409)
.+... ............++++++.|||||||.||+|.++|+++..........+++..+|++++.+|++|..++.. .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~ 227 (521)
T PRK06187 149 EELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL-PY 227 (521)
T ss_pred HHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH-HH
Confidence 00000 00111122345678999999999999999999999999998888888889999999999999999998865 44
Q ss_pred HHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEee
Q 015313 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (409)
Q Consensus 232 ~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~g 311 (409)
.++..|+++++++.+++..+++. ++++++|.++++|++++.+.+..+. ...+++++|.+++|
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~----------l~~~~~t~l~~~p~~~~~l~~~~~~--------~~~~~~~l~~v~~~ 289 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDL----------IETERVTFFFAVPTIWQMLLKAPRA--------YFVDFSSLRLVIYG 289 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHH----------HHHhCCeEEEchHHHHHHHHcCcCC--------CccCcchhhEEEEc
Confidence 58999999999999888888888 7889999999999999999886432 23467889999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccccCCCC------CCccccccccCCeEEEEeeCCCCCCCC--c-cce
Q 015313 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGA------RKAGTVGNPLPGVQVKIAEDESGSDAA--G-VGE 382 (409)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~------~~~~~~G~p~~~~~~~ivd~~~~~~~~--~-~Ge 382 (409)
|+++++++.+.+.+.+++++++.||+||++.+........ ...+++|+|+++++++|+|+++++++. | .||
T Consensus 290 Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Ge 369 (521)
T PRK06187 290 GAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGE 369 (521)
T ss_pred CcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeE
Confidence 9999999999999999999999999999986655433222 266789999999999999999988877 6 799
Q ss_pred EEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 383 ICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 383 l~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
|+++|++++.||+++++.+.+. .+|||
T Consensus 370 l~v~~~~~~~~y~~~~~~~~~~~~~~~~ 397 (521)
T PRK06187 370 IIVRGPWLMQGYWNRPEATAETIDGGWL 397 (521)
T ss_pred EEEECcchhhhhcCCHHHHHHHhhCCce
Confidence 9999999999999999998888 67776
No 50
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1e-48 Score=387.96 Aligned_cols=372 Identities=23% Similarity=0.345 Sum_probs=302.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
++.+.|+++++.+||++|++++. +.+||+||+++++++|+.|++. |+++||+|+++++|+++
T Consensus 24 ~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~-----------------G~~~gd~V~i~~~n~~~ 86 (547)
T PRK06087 24 SLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAK-----------------GIEPGDRVAFQLPGWCE 86 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 57789999999999999999865 7999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh-----HHHHHHHHhhccCC--ceeccCCCCCCCCCc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-----YREVLQNVASKSGA--KFSLIPPVPNVSSET 153 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 153 (409)
++++++||+++|++++|+++..+.+++.++++.+++++++++.. ..+.+......... ..+............
T Consensus 87 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (547)
T PRK06087 87 FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSL 166 (547)
T ss_pred HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCcc
Confidence 99999999999999999999999999999999999999999753 23333333232221 111111111000000
Q ss_pred cc---ccc-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHH
Q 015313 154 TV---FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNA 229 (409)
Q Consensus 154 ~~---~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~ 229 (409)
.. ... ...........+++++|+|||||||.||+|.++|.++...........++.++|++++.+|++|.++++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 246 (547)
T PRK06087 167 SLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHG 246 (547)
T ss_pred CHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHH
Confidence 00 000 00001123456899999999999999999999999999888887777888999999999999999999888
Q ss_pred HHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEE
Q 015313 230 LLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (409)
Q Consensus 230 ~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~ 309 (409)
++.++..|+++++.+.+++..+++. ++++++|+++++|+++..+++.... ...+++++|.++
T Consensus 247 ~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~~--------~~~~~~~lr~i~ 308 (547)
T PRK06087 247 VTAPFLIGARSVLLDIFTPDACLAL----------LEQQRCTCMLGATPFIYDLLNLLEK--------QPADLSALRFFL 308 (547)
T ss_pred HHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCCEEeccHHHHHHHHhcccc--------CCCCCCCeEEEE
Confidence 9999999999999999999999988 7779999999988887777765321 234678999999
Q ss_pred eeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC--CCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEe
Q 015313 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVK 386 (409)
Q Consensus 310 ~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~--~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~ 386 (409)
+||+++++++.+.+.+. ++++++.||+||++.+....... ....+++|.|+++++++++|+++++++.| .|||+++
T Consensus 309 ~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 387 (547)
T PRK06087 309 CGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASR 387 (547)
T ss_pred EcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEe
Confidence 99999999999988775 99999999999998765543322 12345789999999999999999998888 8999999
Q ss_pred CcchhhhhcCCCcccchhh--cccC
Q 015313 387 SPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 387 g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
|++++.|||++|+.+.+.+ +|||
T Consensus 388 g~~~~~gy~~~~~~~~~~~~~~g~~ 412 (547)
T PRK06087 388 GPNVFMGYLDEPELTARALDEEGWY 412 (547)
T ss_pred cccccccccCCHHHHHHHhCCCCCc
Confidence 9999999999999998874 6887
No 51
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.9e-49 Score=393.88 Aligned_cols=365 Identities=21% Similarity=0.304 Sum_probs=284.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC---------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEE
Q 015313 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~---------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V 71 (409)
+|+.+.|.++++.+||++|+++. .+.+||+||.++++++|+.|.+ .+++||+|
T Consensus 21 ~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------------~~~~gd~V 82 (631)
T PRK07769 21 TNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ------------------VTKPGDRV 82 (631)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH------------------hcCCCCEE
Confidence 36788999999999999999863 1579999999999999999987 37899999
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeC-CCCCC--hHHHHHHHhcCCceEEEechhHHHHHHHHhhccC----CceeccC
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i-~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (409)
+++++|+++++++++||+++|++++|+ ++..+ .+++.++++.++++++|++.+..+.+........ ...+.+.
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 45544 5789999999999999999877665544332221 1111111
Q ss_pred CCCCCCCCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHH
Q 015313 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (409)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 224 (409)
..... .. .........++++++|+|||||||.||+|.++|+++...+......+++..+|+++..+|++|..
T Consensus 163 ~~~~~-----~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 163 AVPDE-----VG---ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred ccccc-----cc---cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 10000 00 00111234568999999999999999999999999998888888888888999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEccC--c--chHHHHHHHHhhcCCCCCCccccc---eeeecchHHHHHHHHhhhhhhHHHHHH
Q 015313 225 GLFNALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAI---TAFTGVPTMYTRLIQGYEAMDTELQAA 297 (409)
Q Consensus 225 g~~~~~~~~l~~G~~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~v---t~~~~~P~~l~~l~~~~~~~~~~~~~~ 297 (409)
|+.. .+.+++.|++++++.+ + ++..+++. ++++++ +.+..+|.++..+...... +. ...
T Consensus 235 gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~p~~~~~l~~~~~~-~~--~~~ 300 (631)
T PRK07769 235 GLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRE----------LARKPGGTGGTFSAAPNFAFEHAAARGL-PK--DGE 300 (631)
T ss_pred hhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHH----------HHhhccccCceEeeCCchHHHHHHhhcc-ch--hcc
Confidence 9865 5667788999988753 3 67777777 555665 7899999988776543100 00 000
Q ss_pred hhhhhccceEEEeeCCCCCHHHHHHHHHHh---CC---ccccccccccccccccccCCCC--------------------
Q 015313 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNPLRGA-------------------- 351 (409)
Q Consensus 298 ~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~---~~---~v~~~YG~tE~g~~~~~~~~~~-------------------- 351 (409)
...+++++|.+++||+++++++.++|.+.| |+ .+++.||+||++..++..+...
T Consensus 301 ~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 380 (631)
T PRK07769 301 PPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEV 380 (631)
T ss_pred cCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEec
Confidence 134688999999999999999999999987 33 5899999999876544322110
Q ss_pred -------CCccccccccCCeEEEEeeC-CCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh
Q 015313 352 -------RKAGTVGNPLPGVQVKIAED-ESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 352 -------~~~~~~G~p~~~~~~~ivd~-~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
....++|+|.++.+++|+|+ ++++++.| .|||+++||+++.||||+|++|++.|
T Consensus 381 ~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f 443 (631)
T PRK07769 381 PADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATF 443 (631)
T ss_pred CCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHH
Confidence 01247899999999999994 57888887 89999999999999999999999885
No 52
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-48 Score=386.43 Aligned_cols=372 Identities=23% Similarity=0.358 Sum_probs=303.7
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
||+.+.+.++++.+|+++|+++.++.+||.||.++++++|..|.+. |+++|++|+++++|+++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~~~~~ 79 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRR-----------------GVGFGDRVLILMLNRTE 79 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 5889999999999999999999999999999999999999999984 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-Ccee-ccCCCCC--CCCCcccc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AKFS-LIPPVPN--VSSETTVF 156 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~~~ 156 (409)
++++++||+++|++++|+++..+.+++.++++++++++++++......+........ .... ....... .....+..
T Consensus 80 ~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (542)
T PRK07786 80 FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLL 159 (542)
T ss_pred HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHh
Confidence 999999999999999999999999999999999999999999877665544332211 1111 1111000 00000000
Q ss_pred c-cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhccc-CCCCeEEEecCchhHHHHHHHHHHHH
Q 015313 157 D-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEY-TSADQFLHCLPLHHVHGLFNALLAPL 234 (409)
Q Consensus 157 ~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~d~~l~~~pl~~~~g~~~~~~~~l 234 (409)
. ............+++++++|||||||.||+|.++|+++...+......++. ...+++++..|++|.+|+. .++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l 238 (542)
T PRK07786 160 AEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIG-SMLPGL 238 (542)
T ss_pred hccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHH-HHHHHH
Confidence 0 000111122345689999999999999999999999999888877777666 5778999999999999984 588999
Q ss_pred hcCCEEEEcc--CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeC
Q 015313 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (409)
Q Consensus 235 ~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG 312 (409)
..|+++++.+ .+++..+++. ++++++|.++++|.++..++....... ...++|.+++||
T Consensus 239 ~~G~~~v~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~~~---------~~~~lr~i~~gg 299 (542)
T PRK07786 239 LLGAPTVIYPLGAFDPGQLLDV----------LEAEKVTGIFLVPAQWQAVCAEQQARP---------RDLALRVLSWGA 299 (542)
T ss_pred HccCEEEEccCCCcCHHHHHHH----------HHHcCCeEEEehHHHHHHHHhCcccCc---------cCcceEEEEECC
Confidence 9999999865 5688888888 788999999999999999987633211 123699999999
Q ss_pred CCCCHHHHHHHHHHh-CCccccccccccccccccccC--CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCc
Q 015313 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP 388 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~--~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~ 388 (409)
+++++++.+.+.+.+ +.++++.||+||++.+..... ......+++|+|++++.++|+|++++.++.| .|||+++|+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~ 379 (542)
T PRK07786 300 APASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEIVYRAP 379 (542)
T ss_pred CCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCceEEEEECh
Confidence 999999999999988 789999999999986654322 2234567899999999999999999888887 899999999
Q ss_pred chhhhhcCCCcccchh-hcccC
Q 015313 389 SLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
.++.||+++|+.|++. .+|||
T Consensus 380 ~~~~gy~~~~~~~~~~f~~~~~ 401 (542)
T PRK07786 380 TLMSGYWNNPEATAEAFAGGWF 401 (542)
T ss_pred hhhhhhcCCHHHHHHHhhCCcc
Confidence 9999999999999988 57887
No 53
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-48 Score=387.21 Aligned_cols=374 Identities=22% Similarity=0.346 Sum_probs=296.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++.+|+++|+++.++.+||.||.++++++|++|.++ .|+++||+|+++++|++++
T Consensus 25 ~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~gi~~gd~V~i~~~n~~e~ 88 (562)
T PRK12492 25 SVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQH----------------TDLVPGDRIAVQMPNVLQY 88 (562)
T ss_pred cHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 678899999999999999999999999999999999999999873 3889999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccC-------CC--------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIP-------PV-------- 146 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-------~~-------- 146 (409)
+++++||+++|++++|+++..+.+++.+++++++++++++++...+.+............... ..
T Consensus 89 ~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK12492 89 PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTV 168 (562)
T ss_pred HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccc
Confidence 999999999999999999999999999999999999999987655544433222111100000 00
Q ss_pred -C-------C--CCCCcccccc-----chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc----
Q 015313 147 -P-------N--VSSETTVFDQ-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---- 207 (409)
Q Consensus 147 -~-------~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---- 207 (409)
. . .......... ...........+++++|+|||||||.||+|.++|+++...+......+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 248 (562)
T PRK12492 169 VDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGP 248 (562)
T ss_pred cccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccc
Confidence 0 0 0000000000 0000112345678999999999999999999999999877766554432
Q ss_pred -----cCC-CCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHH
Q 015313 208 -----YTS-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (409)
Q Consensus 208 -----~~~-~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l 280 (409)
... .+++++.+|++|.+++....+..+..|.+.++.. ..++..+++. ++++++|++.++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~ 318 (562)
T PRK12492 249 DGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKE----------LGKWRFSALLGLNTLF 318 (562)
T ss_pred cccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHH----------HHHhCCceeeCcHHHH
Confidence 222 3578899999999998766777788888777654 4577777777 7889999999999999
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCC-CCCCcccccc
Q 015313 281 TRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGN 359 (409)
Q Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~-~~~~~~~~G~ 359 (409)
..+.+... ....+++++|.+++||+++++.+.+.|.+.+++++++.||+||+++++..... .....+++|+
T Consensus 319 ~~l~~~~~--------~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 390 (562)
T PRK12492 319 VALMDHPG--------FKDLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVGI 390 (562)
T ss_pred HHHHhCcC--------cccccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccce
Confidence 99887522 12345789999999999999999999999899999999999999876654332 2335678999
Q ss_pred ccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 360 PLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 360 p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
|+++++++|+|+++++++.| .|||+|+|++++.|||++|++|++.+ +|||
T Consensus 391 p~~~~~v~ivd~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~ 443 (562)
T PRK12492 391 PVPGTALKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWF 443 (562)
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEeCCccccccccCchhhhhcccCCCce
Confidence 99999999999999988888 89999999999999999999999885 6887
No 54
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-48 Score=383.73 Aligned_cols=372 Identities=20% Similarity=0.308 Sum_probs=297.6
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
||+.+.|...++++||++|++++++++||+||.+++.++|..|.+. |+++|++|+++++|+++
T Consensus 7 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~g~~v~i~~~~~~~ 69 (528)
T PRK07470 7 MNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAAR-----------------GVRKGDRILVHSRNCNQ 69 (528)
T ss_pred CCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHH
Confidence 6788999999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC--ceeccCCCCCCCCCcccccc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQ 158 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 158 (409)
++++++||+++|++++|+++..+.+++.++++.++++.++++++....+......... ..+.+...............
T Consensus 70 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (528)
T PRK07470 70 MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVAR 149 (528)
T ss_pred HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhc
Confidence 9999999999999999999999999999999999999999998876655544322211 11111110000000000000
Q ss_pred --chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc--ccCCCCeEEEecCchhHHHHHHHHHHHH
Q 015313 159 --SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPL 234 (409)
Q Consensus 159 --~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~g~~~~~~~~l 234 (409)
..........++++++|+|||||||.||+|.++|+++...+....... +....|+++..+|++|..++.. ++ .+
T Consensus 150 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~-~~ 227 (528)
T PRK07470 150 HLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ-LC-QV 227 (528)
T ss_pred CCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH-HH-HH
Confidence 000112234568899999999999999999999999976555433322 4567899999999999998853 44 57
Q ss_pred hcCCEEEEcc--CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeC
Q 015313 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (409)
Q Consensus 235 ~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG 312 (409)
..|++.++.+ .+++..+++. ++++++|.+.++|++++.+.+.... ...+++++|.+++||
T Consensus 228 ~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG 289 (528)
T PRK07470 228 ARGAATVLLPSERFDPAEVWAL----------VERHRVTNLFTVPTILKMLVEHPAV--------DRYDHSSLRYVIYAG 289 (528)
T ss_pred hcCceEEEecccCcCHHHHHHH----------HHhcCCeEEechHHHHHHHHhCcCc--------CCCCCcceEEEEEcC
Confidence 7787777665 4678888887 7889999999999999999875321 224578899999999
Q ss_pred CCCCHHHHHHHHHHhCCccccccccccccccccccCC--------CCCCccccccccCCeEEEEeeCCCCCCCCc-cceE
Q 015313 313 SALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR--------GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEI 383 (409)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~--------~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel 383 (409)
+++++++.+++.+.++.++++.||+||+++.+..... .....+++|.|+++++++|+|+++++++.| .|||
T Consensus 290 ~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel 369 (528)
T PRK07470 290 APMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGETGEI 369 (528)
T ss_pred CCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCceEE
Confidence 9999999999999899999999999998865542211 123457899999999999999999998888 8999
Q ss_pred EEeCcchhhhhcCCCcccchh-hcccC
Q 015313 384 CVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 384 ~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+++|++++.|||++|+.+++. .+|||
T Consensus 370 ~i~~~~~~~gy~~~~~~~~~~~~~~~~ 396 (528)
T PRK07470 370 CVIGPAVFAGYYNNPEANAKAFRDGWF 396 (528)
T ss_pred EEeCCccchhhcCCHHHHHhhhcCCcE
Confidence 999999999999999999887 68887
No 55
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2e-48 Score=390.05 Aligned_cols=365 Identities=20% Similarity=0.282 Sum_probs=281.3
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC---------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEE
Q 015313 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~---------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V 71 (409)
+|+.+.+.++++++|+++|+++. .+.+||+||.++++++|++|.+ .+++||+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~------------------~~~~gd~V 95 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ------------------VAGPGDRV 95 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH------------------hcCCCCEE
Confidence 46788899999999999999862 1489999999999999999987 48999999
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeC-CCCCC--hHHHHHHHhcCCceEEEechhHHHHHHHHhhccC----CceeccC
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i-~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (409)
+++++|+++++++++||+++|++++|+ ++..+ .+++.++++.++++++|++++..+.+........ ...+.+.
T Consensus 96 ~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 175 (612)
T PRK12476 96 AILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAID 175 (612)
T ss_pred EEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEec
Confidence 999999999999999999999999999 57766 7899999999999999999887766554433221 1111111
Q ss_pred CCCCCCCCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc-cCCCCeEEEecCchhH
Q 015313 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHCLPLHHV 223 (409)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~~~ 223 (409)
..... ...........++++++|+|||||||.||||.++|+++...+......++ +.+++++++.+|++|.
T Consensus 176 ~~~~~--------~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 176 AIPDS--------AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHD 247 (612)
T ss_pred ccccc--------ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccc
Confidence 11000 00011112345689999999999999999999999999887777666666 6788999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEccC--c--chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhh
Q 015313 224 HGLFNALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (409)
Q Consensus 224 ~g~~~~~~~~l~~G~~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~ 299 (409)
.|+.. .+.+++.|++.+++.. + ++..+++.+. ..+++++.++.+|.++..++...... .....
T Consensus 248 ~g~~~-~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~--------~~~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~ 314 (612)
T PRK12476 248 MGLSM-IGFPAVYGGHSTLMSPTAFVRRPQRWIKALS--------EGSRTGRVVTAAPNFAYEWAAQRGLP----AEGDD 314 (612)
T ss_pred cchHH-HHHHHhcCCeEEEECHHHHHHHHHHHHHHHh--------hhccCCeEEEeCCcHHHHHHHHhcCh----hhhcC
Confidence 99865 4444455555555543 2 6777777621 14588999999999988877631100 01123
Q ss_pred hhhccceEEEeeCCCCCHHHHHHHHHHh---CC---cccccccccccccccccc-CCC----------------------
Q 015313 300 SAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNP-LRG---------------------- 350 (409)
Q Consensus 300 ~~~~~lr~v~~gG~~~~~~~~~~~~~~~---~~---~v~~~YG~tE~g~~~~~~-~~~---------------------- 350 (409)
.+++++| +++||+++++++.++|.+.| |+ .+++.||+||++..+... +..
T Consensus 315 ~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (612)
T PRK12476 315 IDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAA 393 (612)
T ss_pred cchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCC
Confidence 3578899 99999999999999999987 44 489999999987544321 110
Q ss_pred ----CCCccccccccCCeEEEEeeCC-CCCCCCc-cceEEEeCcchhhhhcCCCcccchhh
Q 015313 351 ----ARKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 351 ----~~~~~~~G~p~~~~~~~ivd~~-~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
....+++|+|+++++++|+|++ |++++.| .|||+++||+++.||||+|++|++.+
T Consensus 394 ~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f 454 (612)
T PRK12476 394 DAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTF 454 (612)
T ss_pred CCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHH
Confidence 0123578999999999999988 8888888 89999999999999999999999886
No 56
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=4.4e-48 Score=384.68 Aligned_cols=374 Identities=24% Similarity=0.317 Sum_probs=301.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEe--CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~ 78 (409)
+++.+.|.+.++.+|+++|+++ .++.+||+||.++++++|..|.+. |+++||+|+++++|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~g~~V~i~~~~~ 78 (559)
T PRK08315 16 QTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLAL-----------------GIEKGDRVGIWAPNV 78 (559)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCC
Confidence 4688999999999999999988 567899999999999999999994 899999999999999
Q ss_pred HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH-----HHHHHHhhccC--------------C-
Q 015313 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG--------------A- 138 (409)
Q Consensus 79 ~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~--------------~- 138 (409)
++++++++||+++|++++|+++..+.+++..+++++++++++++.... ..+.+...... .
T Consensus 79 ~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (559)
T PRK08315 79 PEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELR 158 (559)
T ss_pred hHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCce
Confidence 999999999999999999999999999999999999999999986432 22222222110 0
Q ss_pred ceeccCCCCC--CCCCccccc-------cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccC
Q 015313 139 KFSLIPPVPN--VSSETTVFD-------QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (409)
Q Consensus 139 ~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 209 (409)
..+....... ......... ............+++++++|||||||.||+|.++|+++...+......+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 238 (559)
T PRK08315 159 RVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLT 238 (559)
T ss_pred eEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCC
Confidence 0000000000 000000000 0000112223567899999999999999999999999999888888888999
Q ss_pred CCCeEEEecCchhHHHHHHHHHHHHhcCCEEEE-ccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhh
Q 015313 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEF-MPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (409)
Q Consensus 210 ~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~ 288 (409)
.+|+++..+|++|..+++..++.++..|+++++ ...+++..+++. ++++++|.+.++|.++..++....
T Consensus 239 ~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~~~~~~~ 308 (559)
T PRK08315 239 EEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA----------VEEERCTALYGVPTMFIAELDHPD 308 (559)
T ss_pred CCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH----------HHHcCCeEEecchHHHHHHHhCcc
Confidence 999999999999999998889999999999994 456788888888 788999999999999988876421
Q ss_pred hhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCC-ccccccccccccccccccCCC---CCCccccccccCCe
Q 015313 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRG---ARKAGTVGNPLPGV 364 (409)
Q Consensus 289 ~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~~~~~---~~~~~~~G~p~~~~ 364 (409)
.....++++|.+++||++++.++.+++.+.++. ++++.||+||++.+++..... .....++|+|++++
T Consensus 309 --------~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~ 380 (559)
T PRK08315 309 --------FARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHL 380 (559)
T ss_pred --------cCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCc
Confidence 123457889999999999999999999998875 599999999998765533221 23567899999999
Q ss_pred EEEEeeCC-CCCCCCc-cceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 365 QVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 365 ~~~ivd~~-~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
+++|+|++ ++.++.| .|||+|+|++++.|||++|+.+++.+ ++||
T Consensus 381 ~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 429 (559)
T PRK08315 381 EVKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWM 429 (559)
T ss_pred EEEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCE
Confidence 99999988 8888887 89999999999999999999998875 7786
No 57
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.9e-49 Score=399.73 Aligned_cols=357 Identities=24% Similarity=0.360 Sum_probs=283.0
Q ss_pred hHHHHHHHhcccCCC-eeEEEeC-CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARD-SVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~-~~a~~~~-~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.|.+.++++|+ ++|+.+. .+.+||+||.++++++|++|.+ .+++||+|+++++|++
T Consensus 205 t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~------------------~~~~gd~Val~~~n~~ 266 (718)
T PRK08043 205 TLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEK------------------YSVEGERIGLMLPNAT 266 (718)
T ss_pred CHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHH------------------hcCCCceEEEEcCCcH
Confidence 678899999999998 6888763 4789999999999999999987 3589999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH--HHhhccC-CceeccCCCCCCCCCccc-
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ--NVASKSG-AKFSLIPPVPNVSSETTV- 155 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~- 155 (409)
+++++++||+++|++++|+++.++.+++.+++++++++++|++.+..+... ....... ...+.+............
T Consensus 267 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 346 (718)
T PRK08043 267 ISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKL 346 (718)
T ss_pred HHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHH
Confidence 999999999999999999999999999999999999999999987654311 0111111 111111110000000000
Q ss_pred ---ccc-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHH
Q 015313 156 ---FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (409)
Q Consensus 156 ---~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~ 231 (409)
... ..........++|+++++|||||||.||+|.++|+++...+......++++.+|++++.+|++|.+++...++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~ 426 (718)
T PRK08043 347 WIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLF 426 (718)
T ss_pred HHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHH
Confidence 000 0000112235689999999999999999999999999998888877788899999999999999999877788
Q ss_pred HHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEe
Q 015313 232 APLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (409)
Q Consensus 232 ~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~ 310 (409)
.++..|+++++.+. ++...+++. +.++++|+++++|+++..+.+. ....++++||.+++
T Consensus 427 ~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~----------~~~~~~~~lr~i~~ 486 (718)
T PRK08043 427 TPLLTGAEVFLYPSPLHYRIVPEL----------VYDRNCTVLFGTSTFLGNYARF----------ANPYDFARLRYVVA 486 (718)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHH----------HHhcCCeEEEchHHHHHHhhhh----------cCcccccceEEEEE
Confidence 99999999998875 455666666 7779999999999998877542 12245789999999
Q ss_pred eCCCCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcch
Q 015313 311 GSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSL 390 (409)
Q Consensus 311 gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~ 390 (409)
||+++++++.+.|.+.+|+++++.||+||++++++.........+++|+|+|+++++|+|+++. ...|||+++|+++
T Consensus 487 gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~~~~---~~~Gel~v~g~~v 563 (718)
T PRK08043 487 GAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGI---EQGGRLQLKGPNI 563 (718)
T ss_pred eCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecCCCC---CCceEEEEecCCc
Confidence 9999999999999999999999999999998665533323346789999999999999997753 2259999999999
Q ss_pred hhhhcC--CCc
Q 015313 391 FKEYWK--LPK 399 (409)
Q Consensus 391 ~~gY~~--~~~ 399 (409)
+.|||+ +|+
T Consensus 564 ~~GY~~~e~~~ 574 (718)
T PRK08043 564 MNGYLRVEKPG 574 (718)
T ss_pred cccccCCCCcc
Confidence 999999 455
No 58
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-48 Score=382.17 Aligned_cols=371 Identities=25% Similarity=0.358 Sum_probs=304.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
|+.+.|.++++++|+++|++++++.+||.||.+++++++..|.+. |+++|++|+++++|++++
T Consensus 13 ~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gv~~~~~V~i~~~~~~~~ 75 (524)
T PRK06188 13 TYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEAL-----------------GLGTGDAVALLSLNRPEV 75 (524)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHH
Confidence 678899999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh-HHHHHHHHhhccC-Cc-eeccCCCCCCCCCccc-cc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-YREVLQNVASKSG-AK-FSLIPPVPNVSSETTV-FD 157 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~-~~ 157 (409)
+++++||+++|++++|+++..+.+++.++++.++++.+++++. ............. .. .+.+............ ..
T Consensus 76 ~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
T PRK06188 76 LMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAK 155 (524)
T ss_pred HHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhc
Confidence 9999999999999999999999999999999999999999976 3333333222211 11 1111111100000000 00
Q ss_pred cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcC
Q 015313 158 QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (409)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G 237 (409)
...........++++++++|||||||.||+|.++|.++...+......++...+|++++.+|++|..++. ++.++..|
T Consensus 156 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G 233 (524)
T PRK06188 156 FGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRG 233 (524)
T ss_pred cCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcC
Confidence 0000011122346799999999999999999999999999998888888999999999999999998874 57789999
Q ss_pred CEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCH
Q 015313 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (409)
Q Consensus 238 ~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~ 317 (409)
+++++.+.+++..+++. ++++++|++.++|.++..+++.... ....++++|.+++||+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~--------~~~~l~~lr~~~~gg~~~~~ 295 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRA----------IEEQRITATFLVPTMIYALLDHPDL--------RTRDLSSLETVYYGASPMSP 295 (524)
T ss_pred CEEEEcCCCCHHHHHHH----------HHHhCCEEEEehHHHHHHHHhCcCc--------cCCCCcceeEEEEcCCCCCH
Confidence 99999999999999988 7889999999999999999875321 22467899999999999999
Q ss_pred HHHHHHHHHhCCccccccccccccccccccCC------CCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcch
Q 015313 318 PVMQQWETITGHRLLERYGMTEFVMAISNPLR------GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (409)
Q Consensus 318 ~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~------~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~ 390 (409)
+..+.+.+.++..+.+.||+||++..+..... ......++|+|+++++++|+|+++++++.| .|||+++|+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~v~~~~~ 375 (524)
T PRK06188 296 VRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEICVRGPLV 375 (524)
T ss_pred HHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEEEECcch
Confidence 99999999899999999999999755442221 123567899999999999999999988887 89999999999
Q ss_pred hhhhcCCCcccchh-hcccC
Q 015313 391 FKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 391 ~~gY~~~~~~t~~~-~~g~~ 409 (409)
+.||+++++.+++. .+|||
T Consensus 376 ~~gy~~~~~~~~~~~~~g~~ 395 (524)
T PRK06188 376 MDGYWNRPEETAEAFRDGWL 395 (524)
T ss_pred hhhhcCChHHhhhhhcCCce
Confidence 99999999999887 78887
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=4.5e-48 Score=380.95 Aligned_cols=365 Identities=23% Similarity=0.378 Sum_probs=301.6
Q ss_pred HHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHH
Q 015313 3 VFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (409)
Q Consensus 3 ~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~ 82 (409)
+.+.|.+.++.+|+++|+.+.++++||+||.+++.++|+.|.+. |+++|++|+++++|+++++
T Consensus 2 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~-----------------g~~~~~~V~i~~~n~~~~~ 64 (515)
T TIGR03098 2 LHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGL-----------------GLARGERVAIYLDKRLETV 64 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCCCHHHH
Confidence 67889999999999999999999999999999999999999984 8899999999999999999
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-C-ceeccCCCCCCC-------CCc
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-A-KFSLIPPVPNVS-------SET 153 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-------~~~ 153 (409)
++++||+++|++++|+++..+.+++..+++++++++++++++....+........ . ..+.+....... .+.
T Consensus 65 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (515)
T TIGR03098 65 TAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWP 144 (515)
T ss_pred HHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHH
Confidence 9999999999999999999999999999999999999999876665544433221 1 111111111000 000
Q ss_pred cccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 015313 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (409)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~ 233 (409)
................+++++++|||||||.||+|.+||+++...+......+....+|++++.+|++|..++. .++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~ 223 (515)
T TIGR03098 145 KLLALGDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFN-QLTTA 223 (515)
T ss_pred HhhccccccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHH-HHHHH
Confidence 00000000011223457899999999999999999999999999888888888888999999999999999985 58899
Q ss_pred HhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCC
Q 015313 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (409)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~ 313 (409)
+..|+++++.+.+++..+++. ++++++|++.++|+++..+.+.. ....+++++|.+++||+
T Consensus 224 l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~---------~~~~~~~~l~~~~~~g~ 284 (515)
T TIGR03098 224 FYVGATVVLHDYLLPRDVLKA----------LEKHGITGLAAVPPLWAQLAQLD---------WPESAAPSLRYLTNSGG 284 (515)
T ss_pred HHcCCEEEEcCCCCHHHHHHH----------HHHcCCceEecChHHHHHHHhcc---------cCCCCccceEEEEecCC
Confidence 999999999999999999988 77799999999999999887631 11235678999999999
Q ss_pred CCCHHHHHHHHHHh-CCccccccccccccccccccC-CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcch
Q 015313 314 ALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (409)
Q Consensus 314 ~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~ 390 (409)
++++++.+.+++.+ ++.+++.||+||++....... ....+.+++|+|+++++++|+|++++.++.+ .|||+++|+.+
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~ 364 (515)
T TIGR03098 285 AMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRGALV 364 (515)
T ss_pred cCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcCchh
Confidence 99999999999998 789999999999876544332 2235678999999999999999999888777 89999999999
Q ss_pred hhhhcCCCcccchh
Q 015313 391 FKEYWKLPKESRTL 404 (409)
Q Consensus 391 ~~gY~~~~~~t~~~ 404 (409)
+.|||++++.|++.
T Consensus 365 ~~gy~~~~~~~~~~ 378 (515)
T TIGR03098 365 AMGYWNDPEKTAER 378 (515)
T ss_pred hccccCCchhhhhh
Confidence 99999999988765
No 60
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=6.3e-48 Score=379.07 Aligned_cols=371 Identities=25% Similarity=0.375 Sum_probs=300.6
Q ss_pred HHHHHHh-cccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHH
Q 015313 4 FKAAYKK-GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (409)
Q Consensus 4 ~~~l~~~-~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~ 82 (409)
.+.+.++ ++.+||++|+++++..+||.||.++++++|+.|.+ .|+++|++|+++++|+++++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~-----------------~g~~~g~~v~l~~~~~~~~~ 69 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRR-----------------LGVKREERVLLLMLDGVDFP 69 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHH
Confidence 3455555 56799999999999999999999999999999998 48999999999999999999
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc-eeccCCCCCCC--CCcccc-cc
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVS--SETTVF-DQ 158 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~-~~ 158 (409)
++++||+++|++++|+++..+.+++.++++.+++++++++++..+.+.+........ .+......... ...+.. ..
T Consensus 70 ~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (508)
T TIGR02262 70 IAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATE 149 (508)
T ss_pred HHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcC
Confidence 999999999999999999999999999999999999999988776665554332211 11111110000 000000 00
Q ss_pred chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHH-HHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcC
Q 015313 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (409)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G 237 (409)
..........++++++++|||||||.||+|.++|+++...+.. ....++++.+|++++..|++|..++...++.++..|
T Consensus 150 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G 229 (508)
T TIGR02262 150 SEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVG 229 (508)
T ss_pred CCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcC
Confidence 0011122345689999999999999999999999999887765 445668889999999999999999877788889999
Q ss_pred CEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCC
Q 015313 238 ATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALP 316 (409)
Q Consensus 238 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~ 316 (409)
+++++.++ +++..++.. ++++++|.+.++|.++..+++... ......+++|.+++||++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~~~~~~~--------~~~~~~~~l~~~~~~G~~l~ 291 (508)
T TIGR02262 230 ATTVLMGERPTPDAVFDR----------LRRHQPTIFYGVPTLYAAMLADPN--------LPAEDQVRLRLCTSAGEALP 291 (508)
T ss_pred ceEEEeCCCCCHHHHHHH----------HHHHCCcEEecchHHHHHHhcCcc--------ccccccccceeEEEcCCCCC
Confidence 99998764 578888888 777999999999999988776421 11234568999999999999
Q ss_pred HHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhc
Q 015313 317 LPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (409)
Q Consensus 317 ~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~ 395 (409)
+++.+.|.+.+++++++.||+||++.+...........+++|.|+++++++|+|+++++++.| .|||+++|++++.||+
T Consensus 292 ~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i~~~~~~~gY~ 371 (508)
T TIGR02262 292 AEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLISGPSSATMYW 371 (508)
T ss_pred HHHHHHHHHHhCCchhhCccccccCceeecCCccCCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEEecCccccccC
Confidence 999999999999999999999999876554333334567899999999999999888888888 8999999999999999
Q ss_pred CCCcccchh-hcccC
Q 015313 396 KLPKESRTL-SSCLY 409 (409)
Q Consensus 396 ~~~~~t~~~-~~g~~ 409 (409)
++|+++++. .+|||
T Consensus 372 ~~~~~~~~~~~~~~~ 386 (508)
T TIGR02262 372 NNRAKTRDTFQGEWT 386 (508)
T ss_pred CCHHHhHhhhhcCce
Confidence 999999887 67786
No 61
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.8e-48 Score=417.83 Aligned_cols=372 Identities=25% Similarity=0.370 Sum_probs=303.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeC-CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~-~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
++.+.+.++++++||++|+++. ++.+||+||.++++++|+.|.+ ++++||+|+++++|+++
T Consensus 616 ~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~------------------~~~~g~~V~i~~~n~~~ 677 (1146)
T PRK08633 616 PLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR------------------ELKDEENVGILLPPSVA 677 (1146)
T ss_pred CHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH------------------hCCCCCeEEEECCCchH
Confidence 5678899999999999999974 6799999999999999999977 57999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhh--ccC--CceeccCCCCC-CCCCccc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS--KSG--AKFSLIPPVPN-VSSETTV 155 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~-~~~~~~~ 155 (409)
++++++||+++|++++|+++..+.+++.++++++++++++++++..+.+..... ... ........... .......
T Consensus 678 ~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1146)
T PRK08633 678 GALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKL 757 (1146)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHH
Confidence 999999999999999999999999999999999999999999887766542110 011 11111111000 0000000
Q ss_pred c--------ccchhhh--ccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHH
Q 015313 156 F--------DQSQAEK--MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHG 225 (409)
Q Consensus 156 ~--------~~~~~~~--~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 225 (409)
. ....... .....++|+++++|||||||.||+|.++|+++...+......++..++|++++.+|++|..+
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 0 0000000 13346789999999999999999999999999999888888888999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhcc
Q 015313 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (409)
Q Consensus 226 ~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 304 (409)
+...++.++..|+++++.+ .+++..+++. ++++++|++.++|++++.+.+.. .....++++
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~--------~~~~~~~~~ 899 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPDPTDALGIAKL----------VAKHRATILLGTPTFLRLYLRNK--------KLHPLMFAS 899 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhcc--------ccCcccCCC
Confidence 9777889999999999876 4678888888 78899999999999999887742 123346789
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHhCCcccccccccccccccccc-CC---------CCCCccccccccCCeEEEEeeC-CC
Q 015313 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LR---------GARKAGTVGNPLPGVQVKIAED-ES 373 (409)
Q Consensus 305 lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~-~~---------~~~~~~~~G~p~~~~~~~ivd~-~~ 373 (409)
+|.+++||+++++++.+++++.+|+++++.||+||++++++.. ++ ...+.+++|+|+|+++++|+|+ ++
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~ 979 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETF 979 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCC
Confidence 9999999999999999999999999999999999998655422 11 1235678999999999999995 46
Q ss_pred CCCCCc-cceEEEeCcchhhhhcCCCcccchh-hc----ccC
Q 015313 374 GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SS----CLY 409 (409)
Q Consensus 374 ~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~----g~~ 409 (409)
++++.| .|||+++||+++.|||++|+.|++. .+ |||
T Consensus 980 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~ 1021 (1146)
T PRK08633 980 EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWY 1021 (1146)
T ss_pred ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeE
Confidence 788887 8999999999999999999999988 45 787
No 62
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=4.3e-48 Score=383.23 Aligned_cols=370 Identities=19% Similarity=0.258 Sum_probs=295.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeC--CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~ 78 (409)
+|+.+.+.+.++.+|+++|+++. ++.+||.||.+++.++|..|.+. |+++||+|+++++|+
T Consensus 28 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~-----------------g~~~g~~V~i~~~~~ 90 (546)
T PLN02330 28 LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSL-----------------GLRKGQVVVVVLPNV 90 (546)
T ss_pred CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCc
Confidence 47889999999999999999974 57999999999999999999994 899999999999999
Q ss_pred HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCC--CCCCCcccc
Q 015313 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP--NVSSETTVF 156 (409)
Q Consensus 79 ~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 156 (409)
++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+... ....+.+.... ....+.+..
T Consensus 91 ~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~ 166 (546)
T PLN02330 91 AEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL----GLPVIVLGEEKIEGAVNWKELL 166 (546)
T ss_pred hHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc----CCcEEEecCCCCCCcccHHHHH
Confidence 999999999999999999999999999999999999999999998877666443 11122211110 000000000
Q ss_pred ccc----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc--cCCCCeEEEecCchhHHHHHHHH
Q 015313 157 DQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (409)
Q Consensus 157 ~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~g~~~~~ 230 (409)
... .........++++++++|||||||.||+|.++|+++...+........ ....+..+..+|++|..++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 246 (546)
T PLN02330 167 EAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGIC 246 (546)
T ss_pred hhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHH
Confidence 000 000122334678999999999999999999999999876654322111 22346899999999999987667
Q ss_pred HHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhc--cceEE
Q 015313 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK--QLRLM 308 (409)
Q Consensus 231 ~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~--~lr~v 308 (409)
+.++..|+++++.+.+++..+++. ++++++|++.++|+++..+++.... ...+++ .+|.+
T Consensus 247 ~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~~~l~~i 308 (546)
T PLN02330 247 CATLRNKGKVVVMSRFELRTFLNA----------LITQEVSFAPIVPPIILNLVKNPIV--------EEFDLSKLKLQAI 308 (546)
T ss_pred HHHhhcCCEEEEecccCHHHHHHH----------HHHcCCeeeecCCHHHHHHHhCccc--------cccccchheeeeE
Confidence 888999999999999999999988 7889999999999999999875221 111222 57999
Q ss_pred EeeCCCCCHHHHHHHHHHh-CCccccccccccccccccccCC-----CCCCccccccccCCeEEEEee-CCCCCCCCc-c
Q 015313 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLR-----GARKAGTVGNPLPGVQVKIAE-DESGSDAAG-V 380 (409)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~-----~~~~~~~~G~p~~~~~~~ivd-~~~~~~~~~-~ 380 (409)
++||+++++++.+++.+.| ++++++.||+||++++...... .....+++|.|+|+++++|+| +++++++.| .
T Consensus 309 ~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~ 388 (546)
T PLN02330 309 MTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP 388 (546)
T ss_pred EEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc
Confidence 9999999999999999998 8999999999999865443211 123456899999999999999 456778877 8
Q ss_pred ceEEEeCcchhhhhcCCCcccchh--hcccC
Q 015313 381 GEICVKSPSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 381 Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
|||+++|++++.||+++|+.+++. .+|||
T Consensus 389 Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~ 419 (546)
T PLN02330 389 GELCVRSQCVMQGYYNNKEETDRTIDEDGWL 419 (546)
T ss_pred eEEEEecchhhhhhccCccchhhhccCCCce
Confidence 999999999999999999999887 47887
No 63
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.3e-48 Score=388.11 Aligned_cols=373 Identities=18% Similarity=0.245 Sum_probs=289.7
Q ss_pred HHHHHHhcccCCCeeEEEe------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 4 ~~~l~~~~~~~~~~~a~~~------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
.+.|.++++.+|+++|+++ ..+.+||+||.+++.++|+.|++ +|+++||+|+++++|
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 118 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-----------------LGVQRGDRVLIYMPM 118 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 4567788888999999986 23689999999999999999999 499999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH---------HHHHHHHhhcc---CCceeccCC
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (409)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+....... ....+.+..
T Consensus 119 ~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 198 (629)
T PRK10524 119 IAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDR 198 (629)
T ss_pred CHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999997632 23333332211 111222111
Q ss_pred CCC-CC---C-Cccccc---c-c-hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHH-HHHhhcccCCCCeE
Q 015313 146 VPN-VS---S-ETTVFD---Q-S-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ-MLTEAWEYTSADQF 214 (409)
Q Consensus 146 ~~~-~~---~-~~~~~~---~-~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~d~~ 214 (409)
... .. . ...... . . .........++++++++|||||||.||+|.++|.+++.... .....+++.++|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~ 278 (629)
T PRK10524 199 GLAPMARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETF 278 (629)
T ss_pred CCCCcCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEE
Confidence 000 00 0 000000 0 0 00011123568999999999999999999999998764443 34445678889999
Q ss_pred EEecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
++..|+.|..++...++.+++.|+++++.++ .++..+++. ++++++|+++++|++++.+.+....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 347 (629)
T PRK10524 279 FCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRI----------VEKYKVNRMFSAPTAIRVLKKQDPA- 347 (629)
T ss_pred EEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHH----------HHHcCceEEEeCHHHHHHHHhcCcc-
Confidence 9999999998877778999999999999874 457778887 7889999999999999988764110
Q ss_pred hHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccc-cC---CCCCCccccccccCCeEE
Q 015313 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISN-PL---RGARKAGTVGNPLPGVQV 366 (409)
Q Consensus 291 ~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~-~~---~~~~~~~~~G~p~~~~~~ 366 (409)
.....++++||.+++||+++++++.+++.+.+++++++.||+||++..+.. .. ......+++|+|++++++
T Consensus 348 -----~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~ 422 (629)
T PRK10524 348 -----LLRKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNV 422 (629)
T ss_pred -----cccccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceE
Confidence 112346789999999999999999999999999999999999999843322 11 123456789999999999
Q ss_pred EEeeC-CCCCCCCc-cceEEEeCc---chhhhhcCCCcccchhh-----cccC
Q 015313 367 KIAED-ESGSDAAG-VGEICVKSP---SLFKEYWKLPKESRTLS-----SCLY 409 (409)
Q Consensus 367 ~ivd~-~~~~~~~~-~Gel~v~g~---~~~~gY~~~~~~t~~~~-----~g~~ 409 (409)
+|+|+ +|++++.| .|||+++|| +++.|||++++.+.+.+ +|||
T Consensus 423 ~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (629)
T PRK10524 423 KLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVY 475 (629)
T ss_pred EEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEE
Confidence 99998 89988887 899999998 57889999998887652 4676
No 64
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-48 Score=378.13 Aligned_cols=354 Identities=21% Similarity=0.330 Sum_probs=289.3
Q ss_pred HHhcccCCCeeEEEe--CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHH
Q 015313 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (409)
Q Consensus 8 ~~~~~~~~~~~a~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~ 85 (409)
+.+++.+||++|+++ +++.+||.||++++.++|+.|.+. |+++|++|+++++|++++++++
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~-----------------g~~~~~~v~i~~~~~~~~~~~~ 64 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRR-----------------GCVDGERLAVLARNSVWLVALH 64 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHHHHHH
Confidence 456778999999987 678999999999999999999984 8999999999999999999999
Q ss_pred HHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhcc
Q 015313 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (409)
Q Consensus 86 ~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (409)
+||+++|++++|+++..+.+++.+++++++++++++++...... .....+....... .........
T Consensus 65 la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~ 130 (488)
T PRK09088 65 FACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR--------TDVEDLAAFIASA------DALEPADTP 130 (488)
T ss_pred HHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc--------ccccchhhhhhhc------cccccccCC
Confidence 99999999999999999999999999999999999987543210 0000000000000 000000112
Q ss_pred CCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC
Q 015313 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (409)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~ 245 (409)
....+++++++|||||||.||+|.++|+++...+............|++++.+|++|..+++..++.++..|+++++.+.
T Consensus 131 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~ 210 (488)
T PRK09088 131 SIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNG 210 (488)
T ss_pred CCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCC
Confidence 23467899999999999999999999999998887777777788899999999999999998778889999999999998
Q ss_pred cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHH
Q 015313 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~ 325 (409)
+++...+..+.+ .++++|+++++|.+++.+.+... .....++++|.+++||++++....+++.+
T Consensus 211 ~~~~~~~~~~~~--------~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gG~~~~~~~~~~~~~ 274 (488)
T PRK09088 211 FEPKRTLGRLGD--------PALGITHYFCVPQMAQAFRAQPG--------FDAAALRHLTALFTGGAPHAAEDILGWLD 274 (488)
T ss_pred CCHHHHHHHHHh--------hccCCcEEeeHHHHHHHHHhCcC--------cCccccccceEEEecCCCCCHHHHHHHHH
Confidence 888888877421 35899999999999998876421 12235678999999999999999888876
Q ss_pred HhCCcccccccccccccccccc---CCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCccc
Q 015313 326 ITGHRLLERYGMTEFVMAISNP---LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKES 401 (409)
Q Consensus 326 ~~~~~v~~~YG~tE~g~~~~~~---~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t 401 (409)
. ++++++.||+||++++.... .....+.+++|.|.|+++++|+|+++++++.| .|||+++||+++.||+++++.|
T Consensus 275 ~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~ 353 (488)
T PRK09088 275 D-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRGPNLSPGYWRRPQAT 353 (488)
T ss_pred h-CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEECCccchhhcCChhhh
Confidence 5 89999999999998654321 11123567899999999999999999888887 8999999999999999999999
Q ss_pred chhh--cccC
Q 015313 402 RTLS--SCLY 409 (409)
Q Consensus 402 ~~~~--~g~~ 409 (409)
++.+ +|||
T Consensus 354 ~~~~~~~g~~ 363 (488)
T PRK09088 354 ARAFTGDGWF 363 (488)
T ss_pred hhhhcCCCCe
Confidence 8874 7897
No 65
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-47 Score=381.49 Aligned_cols=373 Identities=23% Similarity=0.376 Sum_probs=297.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++|+++|+++.+..+||.||+++++++|.+|.+. |+++||+|+++++|++++
T Consensus 24 ~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~-----------------gi~~gd~V~i~~~n~~~~ 86 (557)
T PRK07059 24 SLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSR-----------------GLAKGARVAIMMPNVLQY 86 (557)
T ss_pred CHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCCHHH
Confidence 588999999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCC------------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV------------ 149 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 149 (409)
+++++||+++|++++|+++..+.+++.++++.++++++++++.....+....................
T Consensus 87 ~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (557)
T PRK07059 87 PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVV 166 (557)
T ss_pred HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccc
Confidence 99999999999999999999999999999999999999999887666655433222111111100000
Q ss_pred ------------CCCccccc-----cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc----c
Q 015313 150 ------------SSETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE----Y 208 (409)
Q Consensus 150 ------------~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~ 208 (409)
........ ...........++++++++|||||||.||+|.++|.+++..+......+. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 246 (557)
T PRK07059 167 RRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEK 246 (557)
T ss_pred ccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccc
Confidence 00000000 00001122345789999999999999999999999999876544322211 1
Q ss_pred ---CCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHH
Q 015313 209 ---TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (409)
Q Consensus 209 ---~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~ 284 (409)
...+.+++.+|++|.+++....+.++..|++.++.+. .++..+++. ++++++|.+.++|.++..+.
T Consensus 247 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~ 316 (557)
T PRK07059 247 KPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKE----------LKKYQVHIFPAVNTLYNALL 316 (557)
T ss_pred cCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHH----------HHHhCCeeeecCHHHHHHHH
Confidence 1245788899999999876667788888888777664 467777777 78899999999999999988
Q ss_pred HhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCC-CCCCccccccccCC
Q 015313 285 QGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPG 363 (409)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~-~~~~~~~~G~p~~~ 363 (409)
+... ....+++++|.++.||+++++.+.++|.+.+++++++.||+||++.++..... .....+++|.|+++
T Consensus 317 ~~~~--------~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g 388 (557)
T PRK07059 317 NNPD--------FDKLDFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPS 388 (557)
T ss_pred cCcC--------cCcCCchhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCC
Confidence 7522 12235678999999999999999999999999999999999999876553332 23446789999999
Q ss_pred eEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh--hcccC
Q 015313 364 VQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 364 ~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
++++|+|+++++++.| .|||+++|++++.|||+++++|++. .+|||
T Consensus 389 ~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~ 437 (557)
T PRK07059 389 TEVSIRDDDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFF 437 (557)
T ss_pred cEEEEECCCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCce
Confidence 9999999999988888 7999999999999999999999887 47997
No 66
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.5e-47 Score=377.35 Aligned_cols=372 Identities=23% Similarity=0.329 Sum_probs=298.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
++.+.+++.++++||++|+++.. +.+||+||+++++++|..|.+. |+++||+|+++++
T Consensus 8 ~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~-----------------g~~~~~~v~i~~~ 70 (517)
T PRK08008 8 HLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSL-----------------GIRKGDKVALHLD 70 (517)
T ss_pred cHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcC
Confidence 57889999999999999998754 7899999999999999999984 8999999999999
Q ss_pred CCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC--CceeccCCCCC--CCCC
Q 015313 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPN--VSSE 152 (409)
Q Consensus 77 ~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~ 152 (409)
|+++++++++||+++|++++++++..+.+++.+++++++++.++++.+..+.+.++..... .....+..... ....
T Consensus 71 n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (517)
T PRK08008 71 NCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGV 150 (517)
T ss_pred CCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999988777666543322 11111111100 0000
Q ss_pred ccccc---c--chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHH
Q 015313 153 TTVFD---Q--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (409)
Q Consensus 153 ~~~~~---~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 227 (409)
..... . ..........++++++++|||||||.||+|.++|+++............+..++++++.+|++|..++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 151 SSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred cCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 00000 0 000112233568999999999999999999999999986554444444577889999999999998887
Q ss_pred HHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceE
Q 015313 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (409)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~ 307 (409)
..++.++..|+++++.+.+++..+++. ++++++|.+.++|.+++.++..... .....+.++.
T Consensus 231 ~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~l~~ 292 (517)
T PRK08008 231 TAAMAAFSAGATFVLLEKYSARAFWGQ----------VCKYRATITECIPMMIRTLMVQPPS--------ANDRQHCLRE 292 (517)
T ss_pred HHHHHHHhcCcEEEEccccCHHHHHHH----------HHHcCCcEEechHHHHHHHHhCCCc--------ccccccccee
Confidence 778899999999999999999999988 7889999999999999888764211 1112356787
Q ss_pred EEeeCCCCCHHHHHHHHHHhCCccccccccccccccccc-cCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEE
Q 015313 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICV 385 (409)
Q Consensus 308 v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~-~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v 385 (409)
+..++ +++++....|.+.+++++++.||+||+++.+.. .........++|.|+++++++|+|+++++++.| .|||++
T Consensus 293 ~~~~~-~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v 371 (517)
T PRK08008 293 VMFYL-NLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICI 371 (517)
T ss_pred eEEec-CCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCcceEEE
Confidence 77754 789999999999999999999999999865442 233334567899999999999999999998888 899999
Q ss_pred eC---cchhhhhcCCCcccchh--hcccC
Q 015313 386 KS---PSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 386 ~g---~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
+| ++++.|||++|+.|++. .||||
T Consensus 372 ~g~~~~~~~~gy~~~~~~~~~~~~~~g~~ 400 (517)
T PRK08008 372 KGVPGKTIFKEYYLDPKATAKVLEADGWL 400 (517)
T ss_pred eCCCCcchhhhHhCChHHHhhcccCCCCe
Confidence 98 68999999999999887 47897
No 67
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3.6e-48 Score=419.59 Aligned_cols=358 Identities=19% Similarity=0.293 Sum_probs=299.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++.+||++|+++.++.+||+||.++++++|+.|.+. |+++|++|+|++++++++
T Consensus 459 ~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~-----------------g~~~g~~V~l~~~~~~~~ 521 (1296)
T PRK10252 459 TLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRER-----------------GVKPGDSVAVALPRSVFL 521 (1296)
T ss_pred CHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 577899999999999999999999999999999999999999995 889999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++||+++|++++|+++.++.+++.++++.+++++++++.+....+.... ....... .... .....
T Consensus 522 i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~---~~~~------~~~~~ 589 (1296)
T PRK10252 522 TLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVP---DLTSLCY---NAPL------APQGA 589 (1296)
T ss_pred HHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCC---Cceeeec---cccc------ccccC
Confidence 9999999999999999999999999999999999999999987654432210 0000000 0000 00000
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||||.++|+++.+.+.+....++++++|++++..|++|..+++ .++.+|..|++++
T Consensus 590 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~ 668 (1296)
T PRK10252 590 APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVW-EFFWPFIAGAKLV 668 (1296)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHH-HHHHHHhCCCEEE
Confidence 111223578999999999999999999999999999999999999999999999999999998875 5889999999999
Q ss_pred EccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
+.+. .++..+++. ++++++|++.++|+++..+++..... .....++++|.+++||++++++
T Consensus 669 ~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~l~~l~~~~~~~------~~~~~~~~lr~i~~gGe~l~~~ 732 (1296)
T PRK10252 669 MAEPEAHRDPLAMQQF----------FAEYGVTTTHFVPSMLAAFVASLTPE------GARQSCASLRQVFCSGEALPAD 732 (1296)
T ss_pred ECChhccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhhhccc------cccccCCCccEEEEecCCCCHH
Confidence 9873 467778777 78899999999999999887653211 1112457899999999999999
Q ss_pred HHHHHHHHhCCccccccccccccccccccCCC-------CCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcch
Q 015313 319 VMQQWETITGHRLLERYGMTEFVMAISNPLRG-------ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (409)
Q Consensus 319 ~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~-------~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~ 390 (409)
+.++|.+.+++++++.||+||++..++..... .....++|+|+++++++|+|+++++++.| .|||+++|+++
T Consensus 733 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~Gel~i~g~~~ 812 (1296)
T PRK10252 733 LCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVAGDLYLTGIQL 812 (1296)
T ss_pred HHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCceEEEeccccc
Confidence 99999998899999999999998655432211 22345799999999999999999999998 89999999999
Q ss_pred hhhhcCCCcccchhh
Q 015313 391 FKEYWKLPKESRTLS 405 (409)
Q Consensus 391 ~~gY~~~~~~t~~~~ 405 (409)
++||+++|++|++.|
T Consensus 813 ~~GY~~~~~~t~~~f 827 (1296)
T PRK10252 813 AQGYLGRPDLTASRF 827 (1296)
T ss_pred chhhCCCcccchhhc
Confidence 999999999999874
No 68
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.7e-48 Score=448.36 Aligned_cols=356 Identities=21% Similarity=0.315 Sum_probs=301.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++||++|++++++++||+||+++++++|+.|.+. |+++|++|+|+++|++++
T Consensus 3096 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~-----------------gv~~g~~V~l~~~~s~~~ 3158 (3956)
T PRK12467 3096 LVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAI-----------------GVGPDVLVGVAVERSVEM 3158 (3956)
T ss_pred cHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHc-----------------CCCCCCeEEEEeCCCHHH
Confidence 578899999999999999999999999999999999999999995 999999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++||+++|++++|+++.++.+++.++++.+++++++++....+.+... .......+..... ......
T Consensus 3159 vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~ 3228 (3956)
T PRK12467 3159 IVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP---AGDTALTLDRLDL-------NGYSEN 3228 (3956)
T ss_pred HHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc---cCCceeeecchhh-------cccCCC
Confidence 999999999999999999999999999999999999999998765433211 1111111111000 000111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||||+++|+++.+.+.+....++++++|+++...|++|..+.+ .++.+|..|++++
T Consensus 3229 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~ 3307 (3956)
T PRK12467 3229 NPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQE-RFLWTLICGGCLV 3307 (3956)
T ss_pred CCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHH-HHHHHHhCCCEEE
Confidence 112334678999999999999999999999999999999999999999999999999999998874 6899999999999
Q ss_pred EccC--cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+.+. +++..+++. +.++++|++.++|++++.+++.. ...++++||.+++||+++++++
T Consensus 3308 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~----------~~~~~~~lr~~~~gGe~~~~~~ 3367 (3956)
T PRK12467 3308 VRDNDLWDPEELWQA----------IHAHRISIACFPPAYLQQFAEDA----------GGADCASLDIYVFGGEAVPPAA 3367 (3956)
T ss_pred ECCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhcc----------cccCCCCceEEEEecCCCCHHH
Confidence 9986 678888888 78899999999999999887641 2236788999999999999999
Q ss_pred HHHHHHHh-CCccccccccccccccccccCC-C----CCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhh
Q 015313 320 MQQWETIT-GHRLLERYGMTEFVMAISNPLR-G----ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (409)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~-~----~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~ 392 (409)
.++|.+.+ ++.++|.||+||+++.++.... . .....++|+|+++++++|+|+++++++.| +|||+|+|+++++
T Consensus 3368 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~GEL~i~G~~v~~ 3447 (3956)
T PRK12467 3368 FEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVAGELYIGGVGLAR 3447 (3956)
T ss_pred HHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCCceEEEcchhhhh
Confidence 99999887 6789999999999865542211 1 12346799999999999999999999998 8999999999999
Q ss_pred hhcCCCcccchhh
Q 015313 393 EYWKLPKESRTLS 405 (409)
Q Consensus 393 gY~~~~~~t~~~~ 405 (409)
||||+|++|++.|
T Consensus 3448 GY~~~~~~T~~~F 3460 (3956)
T PRK12467 3448 GYHQRPSLTAERF 3460 (3956)
T ss_pred hccCCcccchhhc
Confidence 9999999999984
No 69
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-47 Score=380.29 Aligned_cols=374 Identities=22% Similarity=0.308 Sum_probs=300.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.++++.+||++|+.+.++.+||.||.+++.++|.+|.+. |+++|++|+++++|+++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~-----------------g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQR-----------------GVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCcH
Confidence 3678999999999999999999999999999999999999999984 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCC-CC------Cc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV-SS------ET 153 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~ 153 (409)
++++++||+++|++++|+++..+.+++.+++++++++++++++...+.+...........+.+...... .. ..
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 175 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPD 175 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccc
Confidence 999999999999999999999999999999999999999999988777666544333222211110000 00 00
Q ss_pred ----------ccccc-------chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHh-hcccCCCCeEE
Q 015313 154 ----------TVFDQ-------SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFL 215 (409)
Q Consensus 154 ----------~~~~~-------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~d~~l 215 (409)
...+. ..........++++++++|||||||.||+|.+||+++...+..... ......+|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l 255 (567)
T PRK06178 176 SLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFL 255 (567)
T ss_pred ccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEE
Confidence 00000 0000112245689999999999999999999999999876655433 35677889999
Q ss_pred EecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHH
Q 015313 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQ 295 (409)
Q Consensus 216 ~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~ 295 (409)
+.+|++|..|+...++.++..|+++++.+++++..++.. ++++++|.+.++|..+..+++...
T Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~l~~~~~------- 318 (567)
T PRK06178 256 SFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAA----------VERYRVTRTVMLVDNAVELMDHPR------- 318 (567)
T ss_pred EecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCC-------
Confidence 999999999987778889999999999999999999988 788999999999999988876421
Q ss_pred HHhhhhhccceEEEee--CCCCCHHHHHHHHHHhCCcccc-ccccccccccccccC---CC----CCCccccccccCCeE
Q 015313 296 AASASAAKQLRLMMCG--SSALPLPVMQQWETITGHRLLE-RYGMTEFVMAISNPL---RG----ARKAGTVGNPLPGVQ 365 (409)
Q Consensus 296 ~~~~~~~~~lr~v~~g--G~~~~~~~~~~~~~~~~~~v~~-~YG~tE~g~~~~~~~---~~----~~~~~~~G~p~~~~~ 365 (409)
....++++++.+..+ ++.+++++.+.+++.+|..++. .||+||++....... .. ...++++|+|+||++
T Consensus 319 -~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~ 397 (567)
T PRK06178 319 -FAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTE 397 (567)
T ss_pred -CCCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcE
Confidence 122345678876544 5899999999999999887775 799999875433211 11 234567999999999
Q ss_pred EEEee-CCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 366 VKIAE-DESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 366 ~~ivd-~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++|+| +++++++.| +|||+++|++++.|||++++.+++. .||||
T Consensus 398 v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~ 444 (567)
T PRK06178 398 FKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWL 444 (567)
T ss_pred EEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhhcccCCce
Confidence 99999 557888887 8999999999999999999999887 68997
No 70
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.7e-47 Score=378.03 Aligned_cols=373 Identities=18% Similarity=0.270 Sum_probs=297.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++ ||++|+++.++.+||+||+++++++|..|.+. |+++|++|+++++|++++
T Consensus 26 ~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-----------------g~~~g~~V~v~~~n~~~~ 86 (536)
T PRK10946 26 PLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQ-----------------GIKPGDTALVQLGNVAEF 86 (536)
T ss_pred cHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCChHHH
Confidence 56788888887 99999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH-----HHHHHHhhccC-CceeccCCCCCCCCCccc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPNVSSETTV 155 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (409)
+++++||+++|++++++.+.....++.++++.+++++++++.+.. .....+..... ..................
T Consensus 87 ~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T PRK10946 87 YITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDA 166 (536)
T ss_pred HHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHH
Confidence 999999999999988877777788899999999999999986421 11122222111 111111111000000000
Q ss_pred ccc-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH-HHHHH
Q 015313 156 FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALLAP 233 (409)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~~ 233 (409)
... ..........++++++++|||||||.||+|.++|+++...+......+++..+|++++.+|++|.+++.. .++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 246 (536)
T PRK10946 167 INHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGV 246 (536)
T ss_pred hhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHH
Confidence 000 0011122345689999999999999999999999999999988888888999999999999999888753 46788
Q ss_pred HhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCC
Q 015313 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (409)
Q Consensus 234 l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~ 313 (409)
+..|+++++.+.+++..++.. ++++++|++.++|.++..+++.... ......++++|.+++||+
T Consensus 247 l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 247 FLAGGTVVLAPDPSATLCFPL----------IEKHQVNVTALVPPAVSLWLQAIAE------GGSRAQLASLKLLQVGGA 310 (536)
T ss_pred hhcCcEEEECCCCCHHHHHHH----------HHHhCCcEEEeChHHHHHHHhhhcc------cCccccccceeEEEECCC
Confidence 999999999988888888887 7889999999999999999875321 112245678999999999
Q ss_pred CCCHHHHHHHHHHhCCcccccccccccccccccc-CCCCCCcccccccc-CCeEEEEeeCCCCCCCCc-cceEEEeCcch
Q 015313 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (409)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~-~~~~~~~~~~G~p~-~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~ 390 (409)
++++.+.+++.+.+++++++.||+||++...... ........++|+|+ |++.++|+|+++++++.| .|||+++|+++
T Consensus 311 ~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~ 390 (536)
T PRK10946 311 RLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTRGPYT 390 (536)
T ss_pred CCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEecCcc
Confidence 9999999999999999999999999976443321 11233467899998 889999999999998888 89999999999
Q ss_pred hhhhcCCCcccchhh--cccC
Q 015313 391 FKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 391 ~~gY~~~~~~t~~~~--~g~~ 409 (409)
+.|||++|+.|++.+ ||||
T Consensus 391 ~~GY~~~~~~t~~~~~~d~~~ 411 (536)
T PRK10946 391 FRGYYKSPQHNASAFDANGFY 411 (536)
T ss_pred chhhcCCcccchhhcccCCce
Confidence 999999999999884 7897
No 71
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-47 Score=372.73 Aligned_cols=338 Identities=33% Similarity=0.548 Sum_probs=285.7
Q ss_pred cccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHh
Q 015313 11 GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWF 90 (409)
Q Consensus 11 ~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~ 90 (409)
+...++++|+.++++++||+||.++++++|..|.. +|+|+++++|+++++++++||++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~----------------------~~~V~l~~~~~~~~~~~~la~~~ 67 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVAG----------------------ARRVAVLATPTLATVLAVVGALI 67 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhcc----------------------CCEEEEECCCCHHHHHHHHHHHh
Confidence 34468999999999999999999999999999964 69999999999999999999999
Q ss_pred hCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhccCCCCC
Q 015313 91 SGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGE 170 (409)
Q Consensus 91 ~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (409)
+|++++|+++..+.+++.++++++++++++++++... .... ...+.. .... . .......++
T Consensus 68 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~--~~~~~~--~~~~---~------~~~~~~~~~ 128 (471)
T PRK07787 68 AGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDDP------AGLP--HVPVRL--HARS---W------HRYPEPDPD 128 (471)
T ss_pred cCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCccc------cccc--ceeeec--cccc---c------ccCCCCCCC
Confidence 9999999999999999999999999999999863110 0000 000000 0000 0 011123568
Q ss_pred CcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHH
Q 015313 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRG 250 (409)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~ 250 (409)
++++++|||||||.||+|.++|+++...+......++...+|++++.+|++|..|++..++.++..|+++++.+.+++..
T Consensus 129 ~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 208 (471)
T PRK07787 129 APALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEA 208 (471)
T ss_pred ceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHH
Confidence 99999999999999999999999999998888888888899999999999999999888999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCc
Q 015313 251 IWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHR 330 (409)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~ 330 (409)
+++. ++ +++|.+.++|.++..+.+... ....++++|.+++||+++++.+.+++.+.++.+
T Consensus 209 ~~~~----------i~-~~~t~~~~~P~~~~~l~~~~~---------~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~ 268 (471)
T PRK07787 209 YAQA----------LS-EGGTLYFGVPTVWSRIAADPE---------AARALRGARLLVSGSAALPVPVFDRLAALTGHR 268 (471)
T ss_pred HHHH----------Hh-hCceEEEcchHHHHHHHhCcc---------ccccccceeEEEECCCCCCHHHHHHHHHHcCCC
Confidence 9888 77 899999999999999886421 123567899999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCC-Cc--cceEEEeCcchhhhhcCCCcccchhh--
Q 015313 331 LLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDA-AG--VGEICVKSPSLFKEYWKLPKESRTLS-- 405 (409)
Q Consensus 331 v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~-~~--~Gel~v~g~~~~~gY~~~~~~t~~~~-- 405 (409)
+++.||+||+++............+++|+|+++++++|+|+++++++ .+ +|||+++|++++.|||++|+.|++.+
T Consensus 269 ~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~ 348 (471)
T PRK07787 269 PVERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTA 348 (471)
T ss_pred eecccCccccCcceecCCCCcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccC
Confidence 99999999998765544444455678999999999999999988876 23 79999999999999999999998884
Q ss_pred cccC
Q 015313 406 SCLY 409 (409)
Q Consensus 406 ~g~~ 409 (409)
+|||
T Consensus 349 ~~~~ 352 (471)
T PRK07787 349 DGWF 352 (471)
T ss_pred CCce
Confidence 7887
No 72
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-47 Score=376.08 Aligned_cols=360 Identities=20% Similarity=0.278 Sum_probs=292.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+|+.+.|.+.+..+||++|++++++.+||+||.++++++|+.|.+. |+++||+|+++++|+++
T Consensus 35 ~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~-----------------gi~~g~~V~i~~~~~~~ 97 (516)
T PRK13383 35 TNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRD-----------------GVAPGRAVGVMCRNGRG 97 (516)
T ss_pred CcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhc-----------------CCCCCCEEEEECCCCHH
Confidence 3678889999999999999999999999999999999999999984 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccch
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
++++++||+.+|++++|+++.++.+++.++++.++++.++++++....+..... ....+..... .. ..
T Consensus 98 ~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~~~~-----~~-~~-- 165 (516)
T PRK13383 98 FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD----AVAVIDPATA-----GA-EE-- 165 (516)
T ss_pred HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc----ceEEeccchh-----hh-hc--
Confidence 999999999999999999999999999999999999999999877665544321 1111111000 00 00
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHH--HHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCC
Q 015313 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID--AQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (409)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~--~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~ 238 (409)
........++.++++|||||||.||+|.++|.... ..........++..+|++++.+|++|.+++.. ++.++..|+
T Consensus 166 -~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~-~~~~l~~G~ 243 (516)
T PRK13383 166 -SGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM-LMLTIALGG 243 (516)
T ss_pred -CCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH-HHHHHhcCC
Confidence 00011224567899999999999999999997432 11222334456788999999999999999864 777899999
Q ss_pred EEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 239 TVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 239 ~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
++++...+++..+++. ++++++|.+.++|.++..+.+..+.. .....++++|.+++||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~gG~~l~~~ 307 (516)
T PRK13383 244 TVLTHRHFDAEAALAQ----------ASLHRADAFTAVPVVLARILELPPRV------RARNPLPQLRVVMSSGDRLDPT 307 (516)
T ss_pred EEEECCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHhccccc------cccCCCCceEEEEECCCCCCHH
Confidence 9999998999999888 77799999999999999987642211 0123467899999999999999
Q ss_pred HHHHHHHHhCCccccccccccccccccccC-CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcC
Q 015313 319 VMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWK 396 (409)
Q Consensus 319 ~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~ 396 (409)
+.++|.+.+++++++.||+||++....... ......+++|+|+|+++++|+|+++++++.| .|||+++|+.++.||++
T Consensus 308 ~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~~Y~~ 387 (516)
T PRK13383 308 LGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVGGELAGTRYTD 387 (516)
T ss_pred HHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEecCcccccccC
Confidence 999999999999999999999986554332 2234567899999999999999999988887 89999999999999999
Q ss_pred CCcccchhhcccC
Q 015313 397 LPKESRTLSSCLY 409 (409)
Q Consensus 397 ~~~~t~~~~~g~~ 409 (409)
++. ....||||
T Consensus 388 ~~~--~~~~~g~~ 398 (516)
T PRK13383 388 GGG--KAVVDGMT 398 (516)
T ss_pred Cch--hheecCce
Confidence 864 33478887
No 73
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-47 Score=378.19 Aligned_cols=373 Identities=25% Similarity=0.331 Sum_probs=300.0
Q ss_pred hHHHHHHHhcccCCCeeEEEe--CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.|.+.++++|+++|+++ .++.+||.||.++++++|+.|.+. |+++|++|+++++|++
T Consensus 19 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~g~~V~i~~~~~~ 81 (558)
T PRK12583 19 TIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLAL-----------------GVQPGDRVGIWAPNCA 81 (558)
T ss_pred cHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCCh
Confidence 678999999999999999987 457899999999999999999984 8999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH-----HHHHHHHhhcc-------------CC--c
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKS-------------GA--K 139 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~-------------~~--~ 139 (409)
+++++++||+++|++++|+++..+.+++.++++++++++++++... ...+....... .. .
T Consensus 82 ~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
T PRK12583 82 EWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRG 161 (558)
T ss_pred HHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceE
Confidence 9999999999999999999999999999999999999999997642 22222211110 00 0
Q ss_pred eeccCCCC--CCCCCcccccc-------chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCC
Q 015313 140 FSLIPPVP--NVSSETTVFDQ-------SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS 210 (409)
Q Consensus 140 ~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~ 210 (409)
........ ....+...... ..........++++++++|||||||.||+|.++|+++...+......+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 241 (558)
T PRK12583 162 VVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE 241 (558)
T ss_pred EEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC
Confidence 00000000 00000000000 0000112235688999999999999999999999999998888888888999
Q ss_pred CCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhh
Q 015313 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (409)
Q Consensus 211 ~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~ 289 (409)
+|++++..|++|..|.+..++.++..|+++++.. .+++..+++. ++++++|++.++|+++..++....
T Consensus 242 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~- 310 (558)
T PRK12583 242 HDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQA----------VEEERCTALYGVPTMFIAELDHPQ- 310 (558)
T ss_pred CCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcccc-
Confidence 9999999999999999888999999999999654 5778888887 788999999999999987776421
Q ss_pred hhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC-CccccccccccccccccccCC---CCCCccccccccCCeE
Q 015313 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLR---GARKAGTVGNPLPGVQ 365 (409)
Q Consensus 290 ~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~-~~v~~~YG~tE~g~~~~~~~~---~~~~~~~~G~p~~~~~ 365 (409)
....+++++|.+++||+++++++.+++.+.++ ..+++.||+||++.+...... ......++|+|++++.
T Consensus 311 -------~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 383 (558)
T PRK12583 311 -------RGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLE 383 (558)
T ss_pred -------ccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCe
Confidence 12245789999999999999999999999886 479999999999976653321 1235678999999999
Q ss_pred EEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh--hcccC
Q 015313 366 VKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 366 ~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
++|+|+++++++.| .|||+++|++++.||+++++.+++. .+|||
T Consensus 384 ~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~ 430 (558)
T PRK12583 384 VKVVDPDGATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWM 430 (558)
T ss_pred EEEECCCCCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCe
Confidence 99999999888887 8999999999999999999999886 57887
No 74
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-47 Score=377.99 Aligned_cols=358 Identities=21% Similarity=0.310 Sum_probs=274.9
Q ss_pred Ch-HHHHHHHhcccCCCeeEEEeCC----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEe
Q 015313 1 ME-VFKAAYKKGSMARDSVAIRADQ----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (409)
Q Consensus 1 ~~-~~~~l~~~~~~~~~~~a~~~~~----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~ 75 (409)
|| +.+.|.+.++++|+++|+++.+ +++||+||.++++++|+.|.+ . ++||+|+|++
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-----------------~--~~g~~V~l~~ 61 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-----------------R--DRPGAVGLVG 61 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-----------------c--CCCCeEEEEc
Confidence 78 8889999999999999999876 789999999999999999987 3 7899999999
Q ss_pred CCCHHHHHHHHHHHhhCcEEEeCCCC-------CChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCC
Q 015313 76 KPSFEFVAGVLGTWFSGCIAVPLALS-------YPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN 148 (409)
Q Consensus 76 ~~~~~~~~~~~A~~~~G~~~~~i~~~-------~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (409)
+|+++++++++||+++|+++++.+.. ...+++.++++.++++++|++.+..+.+....... .+.....
T Consensus 62 ~~~~e~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~~~~~ 136 (525)
T PRK05851 62 EPTVELVAAIQGAWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSV-----TVHDLAT 136 (525)
T ss_pred CCCHHHHHHHHHHHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhccc-----ccccccc
Confidence 99999999999999999986544311 12244556789999999999987665544322111 0100000
Q ss_pred CCCCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccC-CCCeEEEecCchhHHHHH
Q 015313 149 VSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT-SADQFLHCLPLHHVHGLF 227 (409)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~d~~l~~~pl~~~~g~~ 227 (409)
.. ............++++++|+|||||||.||+|.++|+++...+......++.. .+|++++.+|++|.+++.
T Consensus 137 ~~------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 210 (525)
T PRK05851 137 AA------HTNRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLA 210 (525)
T ss_pred cc------cccccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHH
Confidence 00 00000011123568999999999999999999999999999998888888888 899999999999999986
Q ss_pred HHHHHHHhcCCEEEEccC--c--chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhc
Q 015313 228 NALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303 (409)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~ 303 (409)
.++.++..|+++++.+. + ++..+++. ++++++|.+...|.++..+.+... .....+++
T Consensus 211 -~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~p~~~~~~l~~~~~-------~~~~~~l~ 272 (525)
T PRK05851 211 -FLLTAALAGAPLWLAPTTAFSASPFRWLSW----------LSDSRATLTAAPNFAYNLIGKYAR-------RVSDVDLG 272 (525)
T ss_pred -HHHHHHHcCCeEEEcCHHHHHHCHHHHHHH----------HHHhCCeEEeCCcHHHHHHHHhhc-------cccCCCHH
Confidence 47889999999999763 3 45667777 777999988655544444433211 11234578
Q ss_pred cceEEEeeCCCCCHHHHHHHHHH---hCC---ccccccccccccccccccCC---------------CCCCccccccccC
Q 015313 304 QLRLMMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEFVMAISNPLR---------------GARKAGTVGNPLP 362 (409)
Q Consensus 304 ~lr~v~~gG~~~~~~~~~~~~~~---~~~---~v~~~YG~tE~g~~~~~~~~---------------~~~~~~~~G~p~~ 362 (409)
+||.+++||+++++++.++|.+. +|. ++++.||+||++..+..... .....+++|+|+|
T Consensus 273 ~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~ 352 (525)
T PRK05851 273 ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIP 352 (525)
T ss_pred HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCC
Confidence 89999999999999999999875 354 58999999999765443211 1123468999999
Q ss_pred CeEEEEeeCCCC-CCCCc-cceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 363 GVQVKIAEDESG-SDAAG-VGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 363 ~~~~~ivd~~~~-~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
+++++|+|+++. +++.| .|||+++|++++.|||++|+.+ .+|||
T Consensus 353 g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~---~~~~~ 398 (525)
T PRK05851 353 GMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID---PDDWF 398 (525)
T ss_pred CcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC---CCCce
Confidence 999999998874 46666 8999999999999999999865 36887
No 75
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=5.9e-48 Score=419.48 Aligned_cols=365 Identities=17% Similarity=0.195 Sum_probs=288.4
Q ss_pred hHHHHHHHhcccCCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 2 EVFKAAYKKGSMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
++.+.|.++++.+||++|+++ ..+++||+||.++++++|++|.+. |+++|++|+
T Consensus 237 ~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~ 299 (1389)
T TIGR03443 237 AIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKT-----------------GIKRGDVVM 299 (1389)
T ss_pred cHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEE
Confidence 467889999999999999985 357899999999999999999995 899999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH---HHHHHHhhcc-----CCceeccC
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---EVLQNVASKS-----GAKFSLIP 144 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~-----~~~~~~~~ 144 (409)
|+++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++.+.. ..+....... ......+.
T Consensus 300 i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1389)
T TIGR03443 300 IYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQ 379 (1389)
T ss_pred EEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEec
Confidence 999999999999999999999999999999999999999999999999876421 1111111100 00000110
Q ss_pred CCCCCC----CCc--ccccc----chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeE
Q 015313 145 PVPNVS----SET--TVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQF 214 (409)
Q Consensus 145 ~~~~~~----~~~--~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~ 214 (409)
...... ... ..... ..........++++++|+|||||||.||||+++|+++.+.+.+....+++.++|++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 459 (1389)
T TIGR03443 380 DDGSLVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKF 459 (1389)
T ss_pred ccccccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEE
Confidence 000000 000 00000 00001122357899999999999999999999999999999988888899999999
Q ss_pred EEecCchhHHHHHHHHHHHHhcCCEEEEccCc---chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhh
Q 015313 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (409)
Q Consensus 215 l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~ 291 (409)
+...|++|..+++ .++.+|+.|+++++.+.. ++..+++. ++++++|+++++|++++.+...
T Consensus 460 ~~~~~~~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~----- 523 (1389)
T TIGR03443 460 TMLSGIAHDPIQR-DMFTPLFLGAQLLVPTADDIGTPGRLAEW----------MAKYGATVTHLTPAMGQLLSAQ----- 523 (1389)
T ss_pred EEecCceecchHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhc-----
Confidence 9999999988774 689999999999998753 46677776 7889999999999999888653
Q ss_pred HHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHh-CCccccccccccccccccccC--CC---------CCCcccccc
Q 015313 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--RG---------ARKAGTVGN 359 (409)
Q Consensus 292 ~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~--~~---------~~~~~~~G~ 359 (409)
....+++||.+++||+++++...+++.+.. ++++++.||+||++..+.... .. .....++|+
T Consensus 524 ------~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 597 (1389)
T TIGR03443 524 ------ATTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGK 597 (1389)
T ss_pred ------ccccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCC
Confidence 123477899999999999999999988876 789999999999986544211 00 112457899
Q ss_pred ccCCeEEEEeeCCC--CCCCCc-cceEEEeCcchhhhhcCCCcccchhh
Q 015313 360 PLPGVQVKIAEDES--GSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 360 p~~~~~~~ivd~~~--~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
|+++++++|+|+++ ++++.| +|||+|+||++++||||+|++|++.|
T Consensus 598 ~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f 646 (1389)
T TIGR03443 598 GMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKF 646 (1389)
T ss_pred ccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhc
Confidence 99999999999764 567778 89999999999999999999999875
No 76
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.6e-47 Score=377.66 Aligned_cols=369 Identities=18% Similarity=0.258 Sum_probs=282.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++.+||++|+++.+.++||+||+++++++|+.|.+ +|+++||+|+|+++|++++
T Consensus 15 ~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~Gl~~gd~Vai~~~n~~e~ 77 (579)
T PLN03102 15 TPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLIS-----------------LNITKNDVVSVLAPNTPAM 77 (579)
T ss_pred cHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCcHHH
Confidence 46788999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-------CceeccCCCCCCCC---
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-------AKFSLIPPVPNVSS--- 151 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~--- 151 (409)
++++|||+++|++++|+++..+.+++.++++.++++++|++++..+.+..+..... ...+.+........
T Consensus 78 ~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (579)
T PLN03102 78 YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSS 157 (579)
T ss_pred HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcc
Confidence 99999999999999999999999999999999999999999887766665433221 12222211110000
Q ss_pred -Cccccc---cchh------hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCch
Q 015313 152 -ETTVFD---QSQA------EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (409)
Q Consensus 152 -~~~~~~---~~~~------~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (409)
...... .... .......++++++|+|||||||.||+|.++|+++............+...+++++.+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 237 (579)
T PLN03102 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMF 237 (579)
T ss_pred cccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChh
Confidence 000000 0000 000123468999999999999999999999999765444444445566778999999999
Q ss_pred hHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhh
Q 015313 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (409)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~ 301 (409)
|..++.. .+.++..|+++++.+.+++..+++. ++++++|++.++|.++..+.+.... ....
T Consensus 238 h~~g~~~-~~~~~~~g~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~ 298 (579)
T PLN03102 238 HCNGWTF-TWGTAARGGTSVCMRHVTAPEIYKN----------IEMHNVTHMCCVPTVFNILLKGNSL--------DLSP 298 (579)
T ss_pred hhcchhH-HHHHHHhcCcEEeeccCChHHHHHH----------HHHcCCeEEEeChHHHHHHHhCccc--------ccCC
Confidence 9998854 6678889999999988888888888 7889999999999999999875221 1123
Q ss_pred hccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC--------------CCCccccccccCCeEEE
Q 015313 302 AKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--------------ARKAGTVGNPLPGVQVK 367 (409)
Q Consensus 302 ~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~--------------~~~~~~~G~p~~~~~~~ 367 (409)
.++++.+++||+++++.+.+++.+ +|+++++.||+||+++.+...... ....+..+.+++ .++
T Consensus 299 ~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~ 375 (579)
T PLN03102 299 RSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVD 375 (579)
T ss_pred cccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceE
Confidence 456788999999999999998865 599999999999998644321100 011233333444 456
Q ss_pred EeeCC-CCCCCC--c-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 368 IAEDE-SGSDAA--G-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 368 ivd~~-~~~~~~--~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++|.+ +++++. + .|||+|+||++++|||++|+.|++. .+|||
T Consensus 376 i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~ 422 (579)
T PLN03102 376 VKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWL 422 (579)
T ss_pred EeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhccCce
Confidence 66644 455543 3 6999999999999999999999988 58997
No 77
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.9e-47 Score=377.79 Aligned_cols=374 Identities=23% Similarity=0.359 Sum_probs=296.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++.+|+++|+++.++.+||+||.+++.++|+.|.+. +|+++|++|+++++|++++
T Consensus 26 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 89 (560)
T PRK08751 26 TVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGE----------------LQLKKGDRVALMMPNCLQY 89 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHHH
Confidence 567899999999999999999999999999999999999999732 4999999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCC------------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV------------ 149 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 149 (409)
+++++||+++|++++|++|.++.+++.+++++++++++++++.....+....................
T Consensus 90 ~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (560)
T PRK08751 90 PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFV 169 (560)
T ss_pred HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhh
Confidence 99999999999999999999999999999999999999999877666555433332221111000000
Q ss_pred --------CC-----Cccccc-----cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcc----
Q 015313 150 --------SS-----ETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---- 207 (409)
Q Consensus 150 --------~~-----~~~~~~-----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---- 207 (409)
.. .....+ ...........++++++++|||||||.||+|.++|.++...+......+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 249 (560)
T PRK08751 170 VKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGK 249 (560)
T ss_pred hhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccc
Confidence 00 000000 00001112345688999999999999999999999999887776655443
Q ss_pred cCC-CCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHH
Q 015313 208 YTS-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (409)
Q Consensus 208 ~~~-~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~ 285 (409)
... ++++++.+|++|..++......++..|++.++.. .+++..++.. ++++++|++.++|.++..+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~ 319 (560)
T PRK08751 250 LEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKE----------LKKTRFTAFTGVNTLFNGLLN 319 (560)
T ss_pred cCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHH----------HHhcceeEecChHHHHHHHHc
Confidence 233 3577888999999998655666677777766554 5677888777 888999999999999999887
Q ss_pred hhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccC-CCCCCccccccccCCe
Q 015313 286 GYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGV 364 (409)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~ 364 (409)
... ....+++++|.+++||+++++++.+.|.+.+++++++.||+||++..++... ......+++|.|.+++
T Consensus 320 ~~~--------~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~ 391 (560)
T PRK08751 320 TPG--------FDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPST 391 (560)
T ss_pred CcC--------cCCcchhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCc
Confidence 421 1223567899999999999999999999988999999999999986654332 2234567899999999
Q ss_pred EEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 365 QVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 365 ~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
+++|+|++++.++.+ .|||+++|+.++.|||++|++|++.+ +|||
T Consensus 392 ~v~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~ 439 (560)
T PRK08751 392 DACIKDDAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWL 439 (560)
T ss_pred eEEEECCCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCc
Confidence 999999999988887 89999999999999999999998874 6887
No 78
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-47 Score=377.80 Aligned_cols=373 Identities=26% Similarity=0.417 Sum_probs=294.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.+..+++.+|+++|++++++.+||+||++++.++|..|.+. |+++||+|+++++|++++
T Consensus 25 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~-----------------gv~~gd~V~i~~~~~~~~ 87 (563)
T PRK06710 25 PLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKL-----------------GVEKGDRVAIMLPNCPQA 87 (563)
T ss_pred cHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCChHH
Confidence 577889999999999999999999999999999999999999884 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCC---CC-------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV---SS------- 151 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------- 151 (409)
+++++||+++|++++|+++..+.+++.++++.++++++++++...+.+.............+...... ..
T Consensus 88 ~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (563)
T PRK06710 88 VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFV 167 (563)
T ss_pred HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchh
Confidence 99999999999999999999999999999999999999999866554433222111111111000000 00
Q ss_pred -------------------Cccccccc-hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHh-hcccC-
Q 015313 152 -------------------ETTVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYT- 209 (409)
Q Consensus 152 -------------------~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~- 209 (409)
........ ..........+++++++|||||||.||+|.++|+++......... .....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 247 (563)
T PRK06710 168 QKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKE 247 (563)
T ss_pred hcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCC
Confidence 00000000 000011123478999999999999999999999999765433322 22333
Q ss_pred CCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhh
Q 015313 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (409)
Q Consensus 210 ~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~ 289 (409)
.++++++.+|++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+++...
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~- 316 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEA----------IKKHKVTLFPGAPTIYIALLNSPL- 316 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcCCc-
Confidence 456889999999999987666778999999999998899988888 788999999999999999876421
Q ss_pred hhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccC-CCCCCccccccccCCeEEEE
Q 015313 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKI 368 (409)
Q Consensus 290 ~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~i 368 (409)
....+++++|.+++||+++++++.+++.+.+++++++.||+||++.+..... ......+++|.|.+++.+++
T Consensus 317 -------~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i 389 (563)
T PRK06710 317 -------LKEYDISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMI 389 (563)
T ss_pred -------cccCChhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEEE
Confidence 1223567899999999999999999999988999999999999987554322 22334678999999999999
Q ss_pred ee-CCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 369 AE-DESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 369 vd-~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+| +++++++.| .|||+++|+.++.||+++|+.+.+. .||||
T Consensus 390 ~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~ 433 (563)
T PRK06710 390 MSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWL 433 (563)
T ss_pred EECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcc
Confidence 99 556777777 8999999999999999999999887 67897
No 79
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-47 Score=375.09 Aligned_cols=362 Identities=18% Similarity=0.298 Sum_probs=288.1
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccC-CCCCEEEEEeCCCHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFE 80 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~-~~g~~V~l~~~~~~~ 80 (409)
++.+.|..++ .|+++|+++.+..+||.||.++++++|..|.+. |+ .+|++|+++++|+++
T Consensus 4 ~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~-----------------g~~~~~~~V~i~~~n~~~ 64 (540)
T PRK13388 4 TIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIAL-----------------ADPDRPLHVGVLLGNTPE 64 (540)
T ss_pred hHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCCcH
Confidence 4667777765 699999999999999999999999999999994 88 799999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccc-cc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFD-QS 159 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (409)
++++++||+++|++++|+++.++.+++.++++++++++++++++....+.+.. ......+.+.. .. ...... ..
T Consensus 65 ~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~i~~~~-~~---~~~~~~~~~ 139 (540)
T PRK13388 65 MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD-LPGVRVLDVDT-PA---YAELVAAAG 139 (540)
T ss_pred HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc-ccCceEEEccc-hh---hhhhhcccc
Confidence 99999999999999999999999999999999999999999987766554431 01112221111 00 000000 00
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
.........++++++++|||||||.||+|.++|+++...+......+++..+|++++.+|++|..++...++.++..|++
T Consensus 140 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 140 ALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred CcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 00111224568999999999999999999999999998888888888999999999999999999887656678999999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+.+++..+++. ++++++|++..+|..+..++...+. .....++++.+ .|+++++..
T Consensus 220 ~v~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~l~~l~~~~~~--------~~~~~~~l~~~--~G~~~~~~~ 279 (540)
T PRK13388 220 VALPAKFSASGFLDD----------VRRYGATYFNYVGKPLAYILATPER--------PDDADNPLRVA--FGNEASPRD 279 (540)
T ss_pred EEECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCCCC--------ccccccceEEE--ECCCCCHHH
Confidence 999988889988888 7889999999999999888764221 01123456643 366678888
Q ss_pred HHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEE-----------EeeCCCCCCC-Cc-cceEEEe
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVK-----------IAEDESGSDA-AG-VGEICVK 386 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~-----------ivd~~~~~~~-~~-~Gel~v~ 386 (409)
..+|.+.+++++++.||+||+++++.... ....+++|+|++++++. ++|++|+.+. ++ .|||+++
T Consensus 280 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~ 357 (540)
T PRK13388 280 IAEFSRRFGCQVEDGYGSSEGAVIVVREP--GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEAIGELVNT 357 (540)
T ss_pred HHHHHHHhCCceecccccccccceeecCC--CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCcceEEEEe
Confidence 89999989999999999999987665432 23567899999997753 5566666553 34 8999998
Q ss_pred -CcchhhhhcCCCcccchh-hcccC
Q 015313 387 -SPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 387 -g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
|++++.|||++|++|++. .+|||
T Consensus 358 ~g~~~~~gY~~~~~~t~~~~~~g~~ 382 (540)
T PRK13388 358 AGAGFFEGYYNNPEATAERMRHGMY 382 (540)
T ss_pred cCCcccccccCChHHHHHHhhcCce
Confidence 999999999999999888 58897
No 80
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-47 Score=382.37 Aligned_cols=364 Identities=18% Similarity=0.204 Sum_probs=280.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
|+.+.+.++ .+|+++|+++.+ +++||+||.+++.++|+.|++. |+++||+|+++++
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-----------------Gv~~gd~V~i~~~ 147 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRAL-----------------GVGPGDRVAAYLP 147 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcC
Confidence 455555543 579999999743 5899999999999999999994 9999999999999
Q ss_pred CCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH---------HHHHHHHhhccCC--ceeccCC
Q 015313 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSGA--KFSLIPP 145 (409)
Q Consensus 77 ~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~--~~~~~~~ 145 (409)
|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.++...... ..+.+..
T Consensus 148 n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (655)
T PRK03584 148 NIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPY 227 (655)
T ss_pred CCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEec
Confidence 9999999999999999999999999999999999999999999998643 2233333222221 1111111
Q ss_pred CCC---------CCCCccccc--cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHH-HHHHHHhhcccCCCCe
Q 015313 146 VPN---------VSSETTVFD--QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSADQ 213 (409)
Q Consensus 146 ~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~d~ 213 (409)
... ...+..... ............+++++|+|||||||.||||+++|++++. .+......+++.++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~ 307 (655)
T PRK03584 228 LGPAAAAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDR 307 (655)
T ss_pred CCCcccccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCE
Confidence 100 000000000 0001111234568999999999999999999999998764 4555566778889999
Q ss_pred EEEecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhh
Q 015313 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (409)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~ 289 (409)
+++..++.|.... .++.+|+.|+++++.++ .++..+++. ++++++|++.++|++++.+.+....
T Consensus 308 ~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 308 FFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDL----------AAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred EEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHH----------HHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 9999999987653 36788999999999863 467888888 7889999999999999988763110
Q ss_pred hhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHh--CCcccccccccccccccc-ccCCCCCCccccccccCCeEE
Q 015313 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQV 366 (409)
Q Consensus 290 ~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~--~~~v~~~YG~tE~g~~~~-~~~~~~~~~~~~G~p~~~~~~ 366 (409)
.....++++||.+++||+++++++.+.+.+.+ ++.+.+.||+||+++... ..+......+++|.|.+|+++
T Consensus 376 ------~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~ 449 (655)
T PRK03584 376 ------PGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAV 449 (655)
T ss_pred ------ccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCcee
Confidence 11235678999999999999999999999988 468999999999864332 223334567889999999999
Q ss_pred EEeeCCCCCCCCccceEEEeCc--chhhhhcCCCcccc
Q 015313 367 KIAEDESGSDAAGVGEICVKSP--SLFKEYWKLPKESR 402 (409)
Q Consensus 367 ~ivd~~~~~~~~~~Gel~v~g~--~~~~gY~~~~~~t~ 402 (409)
+|+|++|++++++.|||+++|| +++.|||++|+.++
T Consensus 450 ~ivd~~g~~~~g~~GeL~v~gp~p~~~~gy~~~~~~~~ 487 (655)
T PRK03584 450 EAWDEDGRPVVGEVGELVCTKPFPSMPLGFWNDPDGSR 487 (655)
T ss_pred EEECCCCCCCCCCceEEEEccCCCCCcceeeCCCccch
Confidence 9999999988444899999996 79999999998765
No 81
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.8e-47 Score=373.72 Aligned_cols=371 Identities=19% Similarity=0.277 Sum_probs=292.9
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.+.++.+|+++|++.+.+.+||+||++++.++|+.|.+. |+++||+|+++++|+++
T Consensus 10 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~n~~~ 72 (540)
T PRK06164 10 DTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQ-----------------GVRRGDRVAVWLPNCIE 72 (540)
T ss_pred CCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCcHH
Confidence 4788999999999999999999999999999999999999999984 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH-----HHHHHHhhcc--CCc-eeccC-CCCCCCC
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS--GAK-FSLIP-PVPNVSS 151 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~--~~~-~~~~~-~~~~~~~ 151 (409)
++++++||+++|++++|+++..+.+++.++++++++++++++++.. ..+....... ... ...+. .......
T Consensus 73 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (540)
T PRK06164 73 WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPA 152 (540)
T ss_pred HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCC
Confidence 9999999999999999999999999999999999999999987642 2222211110 011 11111 0000000
Q ss_pred Ccc-----ccccc-----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCch
Q 015313 152 ETT-----VFDQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (409)
Q Consensus 152 ~~~-----~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (409)
... ..... .........++++++++|||||||.||+|.++|+++...+......+++..++++++.+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~ 232 (540)
T PRK06164 153 PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFC 232 (540)
T ss_pred CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCch
Confidence 000 00000 00001123467899999999999999999999999999988888888899999999999999
Q ss_pred hHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhh
Q 015313 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (409)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~ 301 (409)
|.+|+. .++.++..|+++++.+.+++..++.. ++++++|+++++|.++..+.+. .....+
T Consensus 233 ~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~l~~l~~~---------~~~~~~ 292 (540)
T PRK06164 233 GVFGFS-TLLGALAGGAPLVCEPVFDAARTARA----------LRRHRVTHTFGNDEMLRRILDT---------AGERAD 292 (540)
T ss_pred hHHHHH-HHHHHHhcCceEEecCCCCHHHHHHH----------HHHhCCeeecCCHHHHHHHHHh---------hcccCC
Confidence 999996 58999999999999999999988888 7889999999999999999875 123346
Q ss_pred hccceEEEeeC-CCCCHHHHHHHHHHhCCccccccccccccccccccCCC---CCCcccccccc-CCeEEEEeeC-CCCC
Q 015313 302 AKQLRLMMCGS-SALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG---ARKAGTVGNPL-PGVQVKIAED-ESGS 375 (409)
Q Consensus 302 ~~~lr~v~~gG-~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~---~~~~~~~G~p~-~~~~~~ivd~-~~~~ 375 (409)
+++++.+..+| .+...++.+.+.+. ++++++.||+||++.++...... .....+.|.|. ++++++|+|+ ++++
T Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 371 (540)
T PRK06164 293 FPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGAL 371 (540)
T ss_pred CcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcC
Confidence 78899887766 45555565555554 89999999999998665433221 22334568875 8999999995 4677
Q ss_pred CCCc-cceEEEeCcchhhhhcCCCcccchhh--cccC
Q 015313 376 DAAG-VGEICVKSPSLFKEYWKLPKESRTLS--SCLY 409 (409)
Q Consensus 376 ~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~--~g~~ 409 (409)
++.| .||||++|++++.|||++|++|++.+ ||||
T Consensus 372 ~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~ 408 (540)
T PRK06164 372 LPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYF 408 (540)
T ss_pred CCCCCeeEEEEecccccccccCCchhhhhcccCCCce
Confidence 7777 89999999999999999999999884 7887
No 82
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-47 Score=344.36 Aligned_cols=388 Identities=21% Similarity=0.283 Sum_probs=299.2
Q ss_pred hHHHHHHHhcccCCCeeEEEe-----------------------CCccccHHHHHHHHHHHHHHHhhCCCCccccccccc
Q 015313 2 EVFKAAYKKGSMARDSVAIRA-----------------------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~-----------------------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~ 58 (409)
++.+.+.+..+.+.++.++-. +.+++||.|+..++..+++.|.+
T Consensus 42 Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~------------- 108 (678)
T KOG1180|consen 42 TLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK------------- 108 (678)
T ss_pred cHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-------------
Confidence 456777777777777777632 23699999999999999999999
Q ss_pred ccccccCCCCCE-EEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC
Q 015313 59 NSAVLAGGCGAR-IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG 137 (409)
Q Consensus 59 ~~~~~g~~~g~~-V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 137 (409)
+|++++++ |+|+++.+.+|+.+++||++.+..+|.++..+.++-+.|-|++++++.+||+.+.++.+....+...
T Consensus 109 ----lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~ 184 (678)
T KOG1180|consen 109 ----LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK 184 (678)
T ss_pred ----hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC
Confidence 58887766 9999999999999999999999999999999999999999999999999999999987776655544
Q ss_pred C-cee-ccCCCCCCCCCcccc----------c--------cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHH
Q 015313 138 A-KFS-LIPPVPNVSSETTVF----------D--------QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA 197 (409)
Q Consensus 138 ~-~~~-~~~~~~~~~~~~~~~----------~--------~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~ 197 (409)
. +.+ ...+.+......+.. + .....++.++.++|+|+|+|||||||.||||+++|+|+++
T Consensus 185 ~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA 264 (678)
T KOG1180|consen 185 TVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVA 264 (678)
T ss_pred ceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHh
Confidence 2 222 222211111111110 0 0011224445789999999999999999999999999999
Q ss_pred HHHHHHhhc-ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecc
Q 015313 198 QVQMLTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (409)
Q Consensus 198 ~~~~~~~~~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 276 (409)
.+....... .+.+.|+++.++||.|++.+.. -+.+++-|+.+-..+..+-.+....+.+. -++-+...+||.+.++
T Consensus 265 ~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~~TLtdts~ki~kg--~kGD~~~lkPTiM~~V 341 (678)
T KOG1180|consen 265 GVTGVGENVPELGPKDRYIAYLPLAHILELTA-ELVCFTWGGRIGYSSPLTLTDTSSKIKKG--CKGDLTELKPTIMAAV 341 (678)
T ss_pred hhhhhcccCcccCCCceEEEechHHHHHHHHH-HHHHHhhCCEeecCCcceecccchhhccC--CcCccccccchhhhhh
Confidence 998887665 6889999999999999999976 56679999999887753322222111110 1122666899999999
Q ss_pred hHHHHHHHHhhh----hhhHHHH------------------------------HHhhhhhccceEEEeeCCCCCHHHHHH
Q 015313 277 PTMYTRLIQGYE----AMDTELQ------------------------------AASASAAKQLRLMMCGSSALPLPVMQQ 322 (409)
Q Consensus 277 P~~l~~l~~~~~----~~~~~~~------------------------------~~~~~~~~~lr~v~~gG~~~~~~~~~~ 322 (409)
|.+++++.+..- .++...+ ..+.....+||++++||+++++++.+.
T Consensus 342 pAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF 421 (678)
T KOG1180|consen 342 PAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRF 421 (678)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHH
Confidence 999998866422 1111111 122334569999999999999999999
Q ss_pred HHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEee-CCC-CCCCC--ccceEEEeCcchhhhhcCCC
Q 015313 323 WETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE-DES-GSDAA--GVGEICVKSPSLFKEYWKLP 398 (409)
Q Consensus 323 ~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~~-~~~~~--~~Gel~v~g~~~~~gY~~~~ 398 (409)
+...+.|++.++||.||+++..+-........+.+|.|+++++++++| +++ ....+ ..||||++|+++..|||+||
T Consensus 422 ~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ 501 (678)
T KOG1180|consen 422 MNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNE 501 (678)
T ss_pred HHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCCh
Confidence 999999999999999999877665555667788999999999999999 333 32222 36999999999999999999
Q ss_pred cccchh--h-cc--cC
Q 015313 399 KESRTL--S-SC--LY 409 (409)
Q Consensus 399 ~~t~~~--~-~g--~~ 409 (409)
+.|++. . || ||
T Consensus 502 ekT~e~ft~~~G~~WF 517 (678)
T KOG1180|consen 502 EKTKEDFTVEDGQRWF 517 (678)
T ss_pred hhhhhhceecCCcEEE
Confidence 999999 3 78 98
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2.2e-46 Score=370.76 Aligned_cols=372 Identities=23% Similarity=0.357 Sum_probs=292.6
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++.+|+++|+.++++.+||.||.++++++|.+|.+. |+++||+|+++++|++++
T Consensus 22 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------gi~~g~~V~i~~~~~~~~ 84 (541)
T TIGR03205 22 TLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRA-----------------GYGKDASVALYLGNTPDH 84 (541)
T ss_pred CHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCChHH
Confidence 567889999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH--HHHHHHHhhccCCceeccCCCCCCCC--------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY--REVLQNVASKSGAKFSLIPPVPNVSS-------- 151 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 151 (409)
+++++||+++|++++|+++..+.+++.++++.++++++++++.. .+...+...........+........
T Consensus 85 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (541)
T TIGR03205 85 PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPI 164 (541)
T ss_pred HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEeccccccccccccccc
Confidence 99999999999999999999999999999999999999998632 12222211111111111111000000
Q ss_pred Cccc-----c---cc-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc------ccCCCCeEEE
Q 015313 152 ETTV-----F---DQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSADQFLH 216 (409)
Q Consensus 152 ~~~~-----~---~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~~~d~~l~ 216 (409)
.... . +. ..........++++++++|||||||.||+|.++|+++....... ..+ .....+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~ 243 (541)
T TIGR03205 165 PADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVIC 243 (541)
T ss_pred CCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEE
Confidence 0000 0 00 00111123456899999999999999999999999987654422 211 2234579999
Q ss_pred ecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHH
Q 015313 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (409)
Q Consensus 217 ~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~ 296 (409)
..|++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+++...
T Consensus 244 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~-------- 305 (541)
T TIGR03205 244 VLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRD----------IEEKRATVFPGVPTMWIALANDPS-------- 305 (541)
T ss_pred eccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCeEeechHHHHHHHHhCcc--------
Confidence 99999999987778889999999999988899999988 778999999999999998876411
Q ss_pred HhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccC-CCCCCccccccccCCeEEEEe--eCCC
Q 015313 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIA--EDES 373 (409)
Q Consensus 297 ~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~iv--d~~~ 373 (409)
....+++++|.++.||+++++++.+++.+.++.++++.||+||++....... ......+++|.|++++.++|. |+++
T Consensus 306 ~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~ 385 (541)
T TIGR03205 306 LEKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPT 385 (541)
T ss_pred ccccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCC
Confidence 1234567899999999999999999999888999999999999987655432 223456789999999998876 4667
Q ss_pred CCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 374 GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 374 ~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++++.| .|||+++|++++.|||++|+.|++. .++||
T Consensus 386 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 423 (541)
T TIGR03205 386 KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRF 423 (541)
T ss_pred ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCc
Confidence 777777 7999999999999999999999887 57886
No 84
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.3e-46 Score=378.66 Aligned_cols=363 Identities=16% Similarity=0.176 Sum_probs=274.0
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC-----ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~-----~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
|+.+.+.++ .++++|+++.+ +++||+||.+++.++|+.|++. |+++||+|+++++
T Consensus 88 n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~-----------------Gv~~GdrV~i~~~ 147 (652)
T TIGR01217 88 NYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRAL-----------------GVRPGDRVSGYLP 147 (652)
T ss_pred eHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcC
Confidence 555555553 46889988742 4899999999999999999984 9999999999999
Q ss_pred CCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH---------HHHHHHHhhccC-Cc-eeccCC
Q 015313 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSG-AK-FSLIPP 145 (409)
Q Consensus 77 ~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~-~~-~~~~~~ 145 (409)
|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+..+..... .. .+.+..
T Consensus 148 n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (652)
T TIGR01217 148 NIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPY 227 (652)
T ss_pred CCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeC
Confidence 9999999999999999999999999999999999999999999998653 333444333322 11 111111
Q ss_pred CCC----CC---CCccccccc-----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHH-HHHHHHhhcccCCCC
Q 015313 146 VPN----VS---SETTVFDQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSAD 212 (409)
Q Consensus 146 ~~~----~~---~~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~d 212 (409)
... .. ......+.. ..........+++++|+|||||||.||||+++|++++. .+......++++++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d 307 (652)
T TIGR01217 228 LGPRETEAPKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGD 307 (652)
T ss_pred CCCcccccccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCc
Confidence 000 00 000000000 00011223568999999999999999999999998754 444455567888999
Q ss_pred eEEEecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhh
Q 015313 213 QFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (409)
Q Consensus 213 ~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~ 288 (409)
++++..|+.|.... .++.+|+.|+++++.++ .++..+++. ++++++|++...|.+++.+.+. .
T Consensus 308 ~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~-~ 374 (652)
T TIGR01217 308 RLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDI----------AERTGATLFGTSAKYVMACRKA-G 374 (652)
T ss_pred EEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHH----------HHHhCCeEEecCHHHHHHHHhc-C
Confidence 99999999998643 25688999999999864 256778887 7889999998888777666442 1
Q ss_pred hhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC--Ccccccccccccccccc-ccCCCCCCccccccccCCeE
Q 015313 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG--HRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQ 365 (409)
Q Consensus 289 ~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~--~~v~~~YG~tE~g~~~~-~~~~~~~~~~~~G~p~~~~~ 365 (409)
.. .....++++||.+++||+++++++.+++.+.++ ..+.+.||+||+++... ..+......+++|.|.+|++
T Consensus 375 ~~-----~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~ 449 (652)
T TIGR01217 375 VH-----PARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTA 449 (652)
T ss_pred CC-----ccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCc
Confidence 00 113357899999999999999999999999885 35678899999753332 22323445678999999999
Q ss_pred EEEeeCCCCCCCCccceEEEeCc--chhhhhcCCCcccc
Q 015313 366 VKIAEDESGSDAAGVGEICVKSP--SLFKEYWKLPKESR 402 (409)
Q Consensus 366 ~~ivd~~~~~~~~~~Gel~v~g~--~~~~gY~~~~~~t~ 402 (409)
++|+|++|++++++.|||+++|| +++.|||++|+.|+
T Consensus 450 v~ivd~~g~~~~g~~GEl~v~gp~p~~~~gy~~~~~~t~ 488 (652)
T TIGR01217 450 VQSWDPEGKPVTGEVGELVCTNPMPSMPIRFWNDPDGSK 488 (652)
T ss_pred eEEECCCCCCCCCCccEEEEecCCCccccceeCCCccch
Confidence 99999999988645899999996 68999999999775
No 85
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=7.1e-47 Score=371.26 Aligned_cols=357 Identities=17% Similarity=0.272 Sum_probs=294.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
|+.+.|.+.++.+|+++|+.+.++.+||+||.+++.++|..|.+. |+++|++|+++++|+.++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------g~~~~~~V~i~~~~~~~~ 63 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKR-----------------ILPKKSPIIVYGHMEPHM 63 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHh-----------------CCCCCCeEEEEeCCCHHH
Confidence 578999999999999999999999999999999999999999985 889999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++||+++|++++|+++.++.+++.++++..+++.++++.+....... ...+.+........ .....
T Consensus 64 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~ 132 (502)
T TIGR01734 64 LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG------TQIITLSALEQAET-----SGGPV 132 (502)
T ss_pred HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC------CceEEchHhhhhhh-----hcCCc
Confidence 99999999999999999999999999999999999999998764322111 11111110000000 00000
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||+|.++|+++...+.+....+....+++++...|++|..+++ .++.++..|++++
T Consensus 133 ~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 211 (502)
T TIGR01734 133 SFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLH 211 (502)
T ss_pred cccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHH-HHHHHHHCCCEEE
Confidence 011223568899999999999999999999999999998888888888999999999999999885 5889999999999
Q ss_pred EccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
+.+. .++..+++. +.+++++.+.++|.+++.++... ......+++++.++++|++++.+
T Consensus 212 ~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~p~~~~~~l~~~--------~~~~~~~~~l~~~~~~G~~~~~~ 273 (502)
T TIGR01734 212 CLDKDITNNFKLLFEE----------LPKTGLNVWVSTPSFVDMCLLDP--------NFNQENYPHLTHFLFCGEELPVK 273 (502)
T ss_pred EcCHHHhcCHHHHHHH----------HHHcCCeEEEEChhHHHHHHhcc--------ccccccCCcccEEEEcCCcCCHH
Confidence 9876 366777777 77899999999999998776531 12334578999999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccccC-----CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchh
Q 015313 319 VMQQWETIT-GHRLLERYGMTEFVMAISNPL-----RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLF 391 (409)
Q Consensus 319 ~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~-----~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~ 391 (409)
+.+.+.+.+ ++++++.||+||+++.+.... .......++|.|.++++++|+|++++.++.| .|||+++|++++
T Consensus 274 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g~~~~ 353 (502)
T TIGR01734 274 TAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIVGPSVS 353 (502)
T ss_pred HHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEcccccc
Confidence 999999988 789999999999875433211 1123445799999999999999999988887 899999999999
Q ss_pred hhhcCCCcccchhh
Q 015313 392 KEYWKLPKESRTLS 405 (409)
Q Consensus 392 ~gY~~~~~~t~~~~ 405 (409)
.||+++|+.|.+.+
T Consensus 354 ~gy~~~~~~~~~~~ 367 (502)
T TIGR01734 354 KGYLNNPEKTAEAF 367 (502)
T ss_pred ccccCCcccchHhh
Confidence 99999999998764
No 86
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.9e-46 Score=370.52 Aligned_cols=374 Identities=22% Similarity=0.345 Sum_probs=296.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++|+++|++++++++||.||.++++++|..|.+. .|+++|++|+++++|++++
T Consensus 24 ~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 87 (560)
T PRK08974 24 SLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNG----------------LGLKKGDRVALMMPNLLQY 87 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 477899999999999999999999999999999999999999842 4899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCC-CCCCCC---------
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP-VPNVSS--------- 151 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------- 151 (409)
+++++||+++|++++|+++..+.+++.++++.+++++++++++..+.+..+........+.... ......
T Consensus 88 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (560)
T PRK08974 88 PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFV 167 (560)
T ss_pred HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccch
Confidence 9999999999999999999999999999999999999999877665555543322221111100 000000
Q ss_pred ------------Cccccccc--------hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---cc
Q 015313 152 ------------ETTVFDQS--------QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EY 208 (409)
Q Consensus 152 ------------~~~~~~~~--------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~ 208 (409)
........ .........++++++++|||||||.||+|.++|.++...+......+ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~ 247 (560)
T PRK08974 168 VKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLH 247 (560)
T ss_pred hhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccC
Confidence 00000000 00001123568999999999999999999999999988765543332 23
Q ss_pred CCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhh
Q 015313 209 TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (409)
Q Consensus 209 ~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~ 287 (409)
...+.++..+|++|.+++....+..+..|+++++.. ..++..+++. ++++++|.+.++|.+++.+.+..
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 317 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKE----------LKKYPFTAITGVNTLFNALLNNE 317 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHH----------HHhcCcceEcCcHHHHHHHHhCc
Confidence 446788899999999988666777788998877654 4567777777 78899999999999999998752
Q ss_pred hhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCC-CCCCccccccccCCeEE
Q 015313 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQV 366 (409)
Q Consensus 288 ~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~-~~~~~~~~G~p~~~~~~ 366 (409)
. ....+++++|.+++||+++++.+.++|.+.+|+++++.||+||++..+..+.. .....+++|.|+|++++
T Consensus 318 ~--------~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 389 (560)
T PRK08974 318 E--------FQELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEI 389 (560)
T ss_pred C--------cccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEE
Confidence 1 12345678999999999999999999999999999999999999866554322 23446789999999999
Q ss_pred EEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 367 KIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 367 ~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+|+|+++++++.| .|||+++|++++.||+++++.+++. .+|||
T Consensus 390 ~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~ 434 (560)
T PRK08974 390 KLVDDDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWL 434 (560)
T ss_pred EEECCCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCc
Confidence 9999999988888 8999999999999999999999877 67887
No 87
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.8e-47 Score=443.15 Aligned_cols=358 Identities=21% Similarity=0.319 Sum_probs=300.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++||++|++++++++||+||.++++++|+.|.+. |+++|++|+|+++|++++
T Consensus 512 ~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~l~~~~s~~~ 574 (5163)
T PRK12316 512 GVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIER-----------------GVGPDVLVGVAMERSIEM 574 (5163)
T ss_pred CHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 478999999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++||+++|++++|+++.++.+++.++++.+++++++++.+....+... .......+...... .......
T Consensus 575 i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~ 646 (5163)
T PRK12316 575 VVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLA---AGVQVLDLDRPAAW-----LEGYSEE 646 (5163)
T ss_pred HHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcc---cCceEEEecCcchh-----hccCCCC
Confidence 999999999999999999999999999999999999999998654432110 01111111111000 0000111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||||.++|+++.+.+.+....++++.+|+++..+|++|..+++ .++.+|..|++++
T Consensus 647 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~-~~~~~L~~G~~l~ 725 (5163)
T PRK12316 647 NPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVW-EFFWPLMSGARLV 725 (5163)
T ss_pred CCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHH-HHHHHHhCCCEEE
Confidence 112234678999999999999999999999999999999999999999999999999999999986 5899999999999
Q ss_pred EccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
+.+. +++..+++. ++++++|++.++|++++.+++.. ....++++|.+++||++++++
T Consensus 726 i~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~~~~l~~~~----------~~~~~~~l~~~~~gGe~l~~~ 785 (5163)
T PRK12316 726 VAAPGDHRDPAKLVEL----------INREGVDTLHFVPSMLQAFLQDE----------DVASCTSLRRIVCSGEALPAD 785 (5163)
T ss_pred ECCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcc----------ccccCCCccEEEEeeccCCHH
Confidence 9853 678888888 78899999999999999987641 123578899999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccc--cCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhh
Q 015313 319 VMQQWETIT-GHRLLERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEY 394 (409)
Q Consensus 319 ~~~~~~~~~-~~~v~~~YG~tE~g~~~~~--~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY 394 (409)
+.++|.+.+ +++++|.||+||+++.++. .........++|+|+++++++|+|+++++++.| .|||+|+|+++++||
T Consensus 786 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~i~G~~v~~GY 865 (5163)
T PRK12316 786 AQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVLGELYLAGRGLARGY 865 (5163)
T ss_pred HHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCceEEEecccccChhh
Confidence 999998776 7899999999999854332 222234566899999999999999999999988 899999999999999
Q ss_pred cCCCcccchhh
Q 015313 395 WKLPKESRTLS 405 (409)
Q Consensus 395 ~~~~~~t~~~~ 405 (409)
+|+|+.|++.|
T Consensus 866 l~~~~~t~~~f 876 (5163)
T PRK12316 866 HGRPGLTAERF 876 (5163)
T ss_pred CCChhhhhhhC
Confidence 99999999875
No 88
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-46 Score=378.84 Aligned_cols=360 Identities=19% Similarity=0.176 Sum_probs=274.9
Q ss_pred hHHH-HHHHhcccCCCeeEEEeCC--------ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 015313 2 EVFK-AAYKKGSMARDSVAIRADQ--------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (409)
Q Consensus 2 ~~~~-~l~~~~~~~~~~~a~~~~~--------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~ 72 (409)
|+.+ .|.+++.++||++|+++.+ +++||+||.+++.++|+.|++ +|+++||+|+
T Consensus 175 n~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrVa 237 (728)
T PLN03052 175 NVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-----------------LGFEKGDAIA 237 (728)
T ss_pred EHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 4444 3445556689999999854 379999999999999999999 4999999999
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH------HHHHHHhhccCCceeccCCC
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR------EVLQNVASKSGAKFSLIPPV 146 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~ 146 (409)
++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++... +....+........+++...
T Consensus 238 i~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~ 317 (728)
T PLN03052 238 IDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPAD 317 (728)
T ss_pred EEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCC
Confidence 999999999999999999999999999999999999999999999999987532 11222111111111121110
Q ss_pred CC---------CCCCccccccc------hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCC
Q 015313 147 PN---------VSSETTVFDQS------QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (409)
Q Consensus 147 ~~---------~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 211 (409)
.. ...+.+..... .........++++++|+|||||||.||||+++|.+++..+......++++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~ 397 (728)
T PLN03052 318 GKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKG 397 (728)
T ss_pred CCccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCC
Confidence 00 00000000000 0000111245899999999999999999999999988777666666788899
Q ss_pred CeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 212 d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
|++++..|++|.++.+ .++.+|+.|+++++.++ .....+++. ++++++|++.++|++++.+.+...
T Consensus 398 d~~~~~~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~----------i~~~~vT~l~~~Pt~l~~l~~~~~-- 464 (728)
T PLN03052 398 DIVCWPTNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKF----------VQDAKVTMLGTVPSIVKTWKNTNC-- 464 (728)
T ss_pred cEEEECCCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHH----------HHHHCCCEEEECHHHHHHHHhcCC--
Confidence 9999999999999985 48899999999999885 345667777 788999999999999998876411
Q ss_pred hHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC-Ccccccccccccccccc-ccCCCCCCccccccccCCeEEEE
Q 015313 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKI 368 (409)
Q Consensus 291 ~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~-~~v~~~YG~tE~g~~~~-~~~~~~~~~~~~G~p~~~~~~~i 368 (409)
....++++||.+++||++++++....+.+.++ .++.+.||+||+++... ..+......+++|.|.+|++++|
T Consensus 465 ------~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v 538 (728)
T PLN03052 465 ------MAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFI 538 (728)
T ss_pred ------cccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEE
Confidence 13457889999999999999999888777765 58999999999875433 22223445678999999999999
Q ss_pred eeCCCCCCCCc---cceEEEeCcch--hhhhcCC
Q 015313 369 AEDESGSDAAG---VGEICVKSPSL--FKEYWKL 397 (409)
Q Consensus 369 vd~~~~~~~~~---~Gel~v~g~~~--~~gY~~~ 397 (409)
+|++|++++.| .|||+++++.. ..+|+|+
T Consensus 539 ~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~ 572 (728)
T PLN03052 539 LDDSGNPYPDDAPCTGELALFPLMFGASSTLLNA 572 (728)
T ss_pred ECCCCCCCCCCCCceEEEEEeCCCCCCCccccCc
Confidence 99999999875 59999986532 3455654
No 89
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9.9e-47 Score=435.53 Aligned_cols=358 Identities=23% Similarity=0.363 Sum_probs=299.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++||++|++++++++||+||.++++++|+.|.+. |+++|++|+|++++++++
T Consensus 513 ~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~-----------------Gv~~g~~V~i~~~~s~~~ 575 (3956)
T PRK12467 513 CVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAA-----------------GVGPDVLVGIAVERSIEM 575 (3956)
T ss_pred CHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 478899999999999999999999999999999999999999995 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++||+++|++++|+++.++.+++.++++++++++++++++....+.. ........+...... .......
T Consensus 576 vv~~lail~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~ 647 (3956)
T PRK12467 576 VVGLLAVLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPV---PAGLRSLCLDEPADL-----LCGYSGH 647 (3956)
T ss_pred HHHHHHHHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhccc---ccCccEEEecccccc-----ccccCCC
Confidence 99999999999999999999999999999999999999999854432211 001111111111000 0000111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||||.++|+++.+.+.+....+++..+|+++...|++|..+.+ .++.+|..|++++
T Consensus 648 ~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 726 (3956)
T PRK12467 648 NPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVT-ELFGALASGATLH 726 (3956)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHH-HHHHHHhCCCEEE
Confidence 112234678999999999999999999999999999999998889999999999999999999985 5899999999999
Q ss_pred EccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
+.+. .++..+++. ++++++|++.++|++++.+++... .....++|.+++||++++++
T Consensus 727 ~~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~----------~~~~~~lr~i~~gGe~l~~~ 786 (3956)
T PRK12467 727 LLPPDCARDAEAFAAL----------MADQGVTVLKIVPSHLQALLQASR----------VALPRPQRALVCGGEALQVD 786 (3956)
T ss_pred EcCccccCCHHHHHHH----------HHHcCCeEEEcCHHHHHHHHhhhc----------cccCCcccEEEEEeecCCHH
Confidence 9884 578888888 788999999999999999976421 12345689999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccccCCC----CCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhh
Q 015313 319 VMQQWETIT-GHRLLERYGMTEFVMAISNPLRG----ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (409)
Q Consensus 319 ~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~~----~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~ 392 (409)
+.++|.+.+ +++++|.||+||+++.++..... .....++|+|+++++++|+|+++++++.| +|||+|+|+++++
T Consensus 787 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G~~v~~ 866 (3956)
T PRK12467 787 LLARVRALGPGARLINHYGPTETTVGVSTYELSDEERDFGNVPIGQPLANLGLYILDHYLNPVPVGVVGELYIGGAGLAR 866 (3956)
T ss_pred HHHHHHHhCCCCEEEeCcCCChhhhheeeEecccccccCCCCcccCCcCCCEEEEECCCCCCCCCCCceEEEecccccch
Confidence 999999987 78999999999998665432211 11235799999999999999999999998 8999999999999
Q ss_pred hhcCCCcccchhh
Q 015313 393 EYWKLPKESRTLS 405 (409)
Q Consensus 393 gY~~~~~~t~~~~ 405 (409)
||||+|++|++.|
T Consensus 867 GYl~~p~~T~~~F 879 (3956)
T PRK12467 867 GYHRRPALTAERF 879 (3956)
T ss_pred hhcCCccccHhhC
Confidence 9999999999875
No 90
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=9.8e-47 Score=441.82 Aligned_cols=358 Identities=21% Similarity=0.281 Sum_probs=300.7
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++||++|++++++++||+||.++++++|+.|.+. |+++|++|+|+++|++++
T Consensus 4552 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~i~~~~s~~~ 4614 (5163)
T PRK12316 4552 CVHQLVAERARMTPDAVAVVFDEEKLTYAELNRRANRLAHALIAR-----------------GVGPEVLVGIAMERSAEM 4614 (5163)
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 477899999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+... .+.....+...... ......
T Consensus 4615 iv~~lavl~aG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~~ 4685 (5163)
T PRK12316 4615 MVGLLAVLKAGGAYVPLDPEYPRERLAYMMEDSGAALLLTQSHLLQRLPIP---DGLASLALDRDEDW------EGFPAH 4685 (5163)
T ss_pred HHHHHHHHHhCcEEecCCCCChHHHHHHHHHhcCCCEEEechhhhhhcccc---cCcceEeecchhhc------ccCCcc
Confidence 999999999999999999999999999999999999999998765433110 11111111110000 000111
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||||.++|+++.+.+.+....++++++|+++...|++|..+.+ .++.+|..|++++
T Consensus 4686 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 4764 (5163)
T PRK12316 4686 DPAVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFSFDGSHE-GLYHPLINGASVV 4764 (5163)
T ss_pred CCccCCCCCceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHHhcCCCcCCeEEEecCcchhhHHH-HHHHHHhCCCEEE
Confidence 122234678999999999999999999999999999999998889999999999999999998875 5899999999999
Q ss_pred EccC--cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++. +++..+++. ++++++|+++++|++++.+.+... ....+++||.+++||+++++++
T Consensus 4765 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~---------~~~~~~~lr~v~~gGe~l~~~~ 4825 (5163)
T PRK12316 4765 IRDDSLWDPERLYAE----------IHEHRVTVLVFPPVYLQQLAEHAE---------RDGEPPSLRVYCFGGEAVAQAS 4825 (5163)
T ss_pred EcCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhhhc---------cccCCCCccEEEEecccCCHHH
Confidence 9874 267888887 788999999999999999987522 1126789999999999999999
Q ss_pred HHHHHHHh-CCccccccccccccccccccCC-----CCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhh
Q 015313 320 MQQWETIT-GHRLLERYGMTEFVMAISNPLR-----GARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK 392 (409)
Q Consensus 320 ~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~-----~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~ 392 (409)
.+++.+.+ ++++++.||+||+++.++.... ......++|+|+++++++|+|+++++++.| +|||+|+||++++
T Consensus 4826 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~g~~GEl~i~G~~v~~ 4905 (5163)
T PRK12316 4826 YDLAWRALKPVYLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLDGQLNPLPVGVAGELYLGGEGVAR 4905 (5163)
T ss_pred HHHHHHhCCCCEEEecccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEECCCCCcCCCCCCceEEECCcccch
Confidence 98888776 6899999999999876543221 123456899999999999999999999988 8999999999999
Q ss_pred hhcCCCcccchhh
Q 015313 393 EYWKLPKESRTLS 405 (409)
Q Consensus 393 gY~~~~~~t~~~~ 405 (409)
||||+|+.|++.|
T Consensus 4906 GY~~~~~~t~~~f 4918 (5163)
T PRK12316 4906 GYLERPALTAERF 4918 (5163)
T ss_pred hhcCChhhhhhhc
Confidence 9999999999885
No 91
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-46 Score=367.06 Aligned_cols=360 Identities=20% Similarity=0.288 Sum_probs=289.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|..++. ++++|+.++++++||.||.++++++|++|.++ .|++++++|+++++|++++
T Consensus 6 ~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~----------------~~~~~~~~V~i~~~n~~~~ 67 (529)
T PRK07867 6 TVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRAR----------------LDPTRPPHVGVLLDNTPEF 67 (529)
T ss_pred cHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCCHHH
Confidence 56788888775 89999999999999999999999999999984 3788999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccc--cc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFD--QS 159 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 159 (409)
+++++||+++|++++|+++..+.+++.+++++++++++|++++....+..+.. ....+.+... ...+... ..
T Consensus 68 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~l~~~~~ 141 (529)
T PRK07867 68 SLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDP--GVRVINVDSP----AWADELAAHRD 141 (529)
T ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhcc--CceEEEeccc----cHHHHhcccCC
Confidence 99999999999999999999999999999999999999999988776554421 1111111110 0000000 00
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
.........++++++++|||||||.||+|+++|+++..........++++..|+++..+|++|..+++..++.++..|++
T Consensus 142 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 221 (529)
T PRK07867 142 AEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGAS 221 (529)
T ss_pred CCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCce
Confidence 00112234668999999999999999999999999998888888888889999999999999999998778888999999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+.+++..+++. ++++++|++.++|..+..+++..+. .....+++|. +.||+.+++..
T Consensus 222 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~ll~~~~~--------~~~~~~~lr~-~~gg~~~~~~~ 282 (529)
T PRK07867 222 IALRRKFSASGFLPD----------VRRYGATYANYVGKPLSYVLATPER--------PDDADNPLRI-VYGNEGAPGDI 282 (529)
T ss_pred EEecCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCCc--------ccccccceEE-EecCCCChHHH
Confidence 999998999999888 7789999999999999988764221 1112356885 45888887764
Q ss_pred HHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeC-CCCCCCCc-------------cceEEE
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAED-ESGSDAAG-------------VGEICV 385 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~-~~~~~~~~-------------~Gel~v 385 (409)
.++.+.+|+++++.||+||+++.....+. ...+++|.|+++ ++|+|+ ++..++.+ .|||++
T Consensus 283 -~~~~~~~g~~l~~~YG~TE~~~~~~~~~~--~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i 357 (529)
T PRK07867 283 -ARFARRFGCVVVDGFGSTEGGVAITRTPD--TPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVN 357 (529)
T ss_pred -HHHHHHhCCcEEEeecccccccccccCCC--CCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEE
Confidence 67788889999999999999866543322 345689999998 677774 45555443 599999
Q ss_pred -eCcchhhhhcCCCcccchh-hcccC
Q 015313 386 -KSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 386 -~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
+|++++.|||++|+.+.+. .+|||
T Consensus 358 ~~g~~~~~gy~~~~~~~~~~~~~g~~ 383 (529)
T PRK07867 358 TAGPGGFEGYYNDPEADAERMRGGVY 383 (529)
T ss_pred ecCCcccccccCChHhhhhhhcCCeE
Confidence 9999999999999999887 68887
No 92
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.7e-46 Score=366.47 Aligned_cols=370 Identities=18% Similarity=0.256 Sum_probs=290.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeC----CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~----~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
++.+.|+..++.+|+++++.+. .+.+||.||.++++++|.+|.+. |+++||+|+++++|
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~-----------------g~~~~d~v~i~~~~ 73 (539)
T PRK07008 11 LISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAAL-----------------GVEPGDRVGTLAWN 73 (539)
T ss_pred CHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCC
Confidence 3577899999999999998752 26899999999999999999994 89999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCce--eccCCCCCCCCC---
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF--SLIPPVPNVSSE--- 152 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--- 152 (409)
+++++++++||+++|++++|+++..+.+++.++++.++++++++++++.+.+..+........ +...........
T Consensus 74 ~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (539)
T PRK07008 74 GYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTP 153 (539)
T ss_pred cHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcc
Confidence 999999999999999999999999999999999999999999999887776665544332211 111111100000
Q ss_pred -ccccc---c-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHH--HHHhhcccCCCCeEEEecCchhHHH
Q 015313 153 -TTVFD---Q-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ--MLTEAWEYTSADQFLHCLPLHHVHG 225 (409)
Q Consensus 153 -~~~~~---~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~--~~~~~~~~~~~d~~l~~~pl~~~~g 225 (409)
....+ . ..........++++++++|||||||.||+|.+||++++.... .....++...+|++++..|++|..+
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~ 233 (539)
T PRK07008 154 LLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNA 233 (539)
T ss_pred cccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhh
Confidence 00000 0 000111234567899999999999999999999999874332 2334567788999999999999887
Q ss_pred HHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhcc
Q 015313 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (409)
Q Consensus 226 ~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 304 (409)
+.. .+.++..|+++++.+ .+++..+++. ++++++|++.++|.++..+++..+. ...++++
T Consensus 234 ~~~-~~~~l~~G~~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~ 294 (539)
T PRK07008 234 WGL-PYSAPLTGAKLVLPGPDLDGKSLYEL----------IEAERVTFSAGVPTVWLGLLNHMRE--------AGLRFST 294 (539)
T ss_pred HHH-HHHHHhcCceEEEecCCcCHHHHHHH----------HHHcCCEEEEechHHHHHHHhcccc--------cCCCccc
Confidence 743 577889999999874 5688888887 7889999999999999999876332 2346789
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC-----------CCCccccccccCCeEEEEeeCCC
Q 015313 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----------ARKAGTVGNPLPGVQVKIAEDES 373 (409)
Q Consensus 305 lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~-----------~~~~~~~G~p~~~~~~~ivd~~~ 373 (409)
+|.++++|+++++++.+++.+.+++++++.||+||++......... .....++|+|+|+++++|+|+++
T Consensus 295 l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~ 374 (539)
T PRK07008 295 LRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDG 374 (539)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCC
Confidence 9999999999999999999999999999999999998654322110 11246789999999999999988
Q ss_pred CCCCC--c-cceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 374 GSDAA--G-VGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 374 ~~~~~--~-~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
+.++. + .|||+++|++++.|||++|+.. ..+|||
T Consensus 375 ~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~~--~~~g~~ 411 (539)
T PRK07008 375 RELPWDGKAFGDLQVRGPWVIDRYFRGDASP--LVDGWF 411 (539)
T ss_pred CccCCCCCcceEEEEeCCccchhhcCChhhh--hcCCCc
Confidence 87764 2 6999999999999999998432 247887
No 93
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.2e-46 Score=436.08 Aligned_cols=358 Identities=19% Similarity=0.285 Sum_probs=300.3
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++++||++|+++.+.++||+||+++++++|+.|.+ +|+++|++|+|++++++++
T Consensus 3721 ~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~-----------------~gv~~~~~V~v~~~~s~~~ 3783 (4334)
T PRK05691 3721 SYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRA-----------------AGVGVDQPVALLAERGLDL 3783 (4334)
T ss_pred CHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57899999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCC----ceeccCCCCCCCCCccccc
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA----KFSLIPPVPNVSSETTVFD 157 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 157 (409)
+++++|++++|++++|+++.++.+++.++++++++++++++.........+...... ........ . ...
T Consensus 3784 ~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~ 3856 (4334)
T PRK05691 3784 LGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEV---Q----AGE 3856 (4334)
T ss_pred HHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeeccc---c----ccc
Confidence 999999999999999999999999999999999999999998765544333222111 01111100 0 000
Q ss_pred cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcC
Q 015313 158 QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (409)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G 237 (409)
...........+++.++++|||||||.||||+++|+++.+.+.+....+++++.|+++...++++..+.+ .++.+++.|
T Consensus 3857 ~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~-~~~~~l~~G 3935 (4334)
T PRK05691 3857 VASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVW-QFLAAPLFG 3935 (4334)
T ss_pred ccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHH-HHHHHHhCC
Confidence 0011112234678999999999999999999999999999999999999999999999999999998885 589999999
Q ss_pred CEEEEccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCC
Q 015313 238 ATVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (409)
Q Consensus 238 ~~i~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~ 314 (409)
+++++++. .++..+++. ++++++|++.++|+++..++.. ....+++||.+++||++
T Consensus 3936 ~~l~i~~~~~~~~~~~l~~~----------~~~~~vt~~~~~Ps~~~~l~~~-----------~~~~~~~lr~~~~gGe~ 3994 (4334)
T PRK05691 3936 ARVEIVPNAIAHDPQGLLAH----------VQAQGITVLESVPSLIQGMLAE-----------DRQALDGLRWMLPTGEA 3994 (4334)
T ss_pred CEEEEcCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhh-----------ccccCCCceEEEecCCc
Confidence 99999875 457777777 7789999999999999988753 12346789999999999
Q ss_pred CCHHHHHHHHHHh-CCccccccccccccccccccC----CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCc
Q 015313 315 LPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL----RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSP 388 (409)
Q Consensus 315 ~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~----~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~ 388 (409)
+++++.++|.+.+ +++++|.||.||++..++... .......++|+|+++++++|+|++++++|.| +|||+|+|+
T Consensus 3995 l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~GEL~i~G~ 4074 (4334)
T PRK05691 3995 MPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAVGELCVAGT 4074 (4334)
T ss_pred CCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCceEEEEecc
Confidence 9999999998876 789999999999987554211 1112334699999999999999999999998 899999999
Q ss_pred chhhhhcCCCcccchhh
Q 015313 389 SLFKEYWKLPKESRTLS 405 (409)
Q Consensus 389 ~~~~gY~~~~~~t~~~~ 405 (409)
.+++||+|+|++|+++|
T Consensus 4075 ~v~~GY~~~~~~t~~~f 4091 (4334)
T PRK05691 4075 GVGRGYVGDPLRTALAF 4091 (4334)
T ss_pred cccccccCCcccchhhc
Confidence 99999999999999885
No 94
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=4.8e-46 Score=365.53 Aligned_cols=358 Identities=20% Similarity=0.275 Sum_probs=295.3
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
||+.+.|.+.++.+|+++|+.+.+..+||+||.++++++|..|.+. |+++|++|+++++|+.+
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~-----------------g~~~~~~v~~~~~~~~~ 64 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSL-----------------KLPDKSPIIVFGHMSPE 64 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHH
Confidence 7899999999999999999999999999999999999999999995 88999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccch
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
++++++||+++|++++|+++..+.+++.++++..++++++++.+.... ................ .....
T Consensus 65 ~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-----~~~~~ 133 (503)
T PRK04813 65 MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE------ILGIPVITLDELKDIF-----ATGNP 133 (503)
T ss_pred HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc------ccCCcEEehHHhhhhh-----hcccc
Confidence 999999999999999999999999999999999999999998764100 0001111110000000 00000
Q ss_pred hhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEE
Q 015313 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (409)
Q Consensus 161 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i 240 (409)
........++++++++|||||||.||+|.++|+++...+.+....+.+..+++++...|++|..+++ .++.++..|+++
T Consensus 134 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~ 212 (503)
T PRK04813 134 YDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVM-DLYPTLASGGTL 212 (503)
T ss_pred ccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHH-HHHHHHhcCCEE
Confidence 0112234568899999999999999999999999999888888888889999999999999998875 478899999999
Q ss_pred EEccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCH
Q 015313 241 EFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (409)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~ 317 (409)
++.+. .++..+++. +.++++|.+..+|.+++.+.... .....+++++|.++++|+++++
T Consensus 213 v~~~~~~~~~~~~~~~~----------~~~~~~t~~~~~p~~~~~~~~~~--------~~~~~~~~~l~~i~~~G~~l~~ 274 (503)
T PRK04813 213 VALPKDMTANFKQLFET----------LPQLPINVWVSTPSFADMCLLDP--------SFNEEHLPNLTHFLFCGEELPH 274 (503)
T ss_pred EEcChhhhcCHHHHHHH----------HHHcCCeEEEeChHHHHHHHHhh--------ccCcccCCCceEEEEecCcCCH
Confidence 99886 467777777 77799999999999998776541 1233467899999999999999
Q ss_pred HHHHHHHHHh-CCccccccccccccccccccC-----CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcch
Q 015313 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNPL-----RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSL 390 (409)
Q Consensus 318 ~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~-----~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~ 390 (409)
.+.+++.+.+ ++.+++.||+||++....... .......++|.|.++++++|+|+++.+++.+ .|||+++|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~ 354 (503)
T PRK04813 275 KTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVISGPSV 354 (503)
T ss_pred HHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEecccc
Confidence 9999999998 789999999999975443211 1123455799999999999999999988887 89999999999
Q ss_pred hhhhcCCCcccchhh
Q 015313 391 FKEYWKLPKESRTLS 405 (409)
Q Consensus 391 ~~gY~~~~~~t~~~~ 405 (409)
+.|||++|+.|.+.+
T Consensus 355 ~~gy~~~~~~~~~~~ 369 (503)
T PRK04813 355 SKGYLNNPEKTAEAF 369 (503)
T ss_pred ccccCCChhHhHHhh
Confidence 999999999998874
No 95
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-46 Score=370.81 Aligned_cols=362 Identities=20% Similarity=0.299 Sum_probs=274.2
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCC---------ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEE
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQ---------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~---------~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V 71 (409)
|++.+.|++++..+|+++|+++.+ +.+||+||.+++.++|++|.+. | .+||+|
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~-----------------g-~~gd~V 62 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRH-----------------G-STGDRA 62 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHh-----------------C-CCCCEE
Confidence 789999999999999999998632 6899999999999999999984 7 589999
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeCCC---CCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC---C-ceeccC
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLAL---SYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG---A-KFSLIP 144 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i~~---~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~-~~~~~~ 144 (409)
+++++|+++++++++||+++|++++|+++ ..+.+++.++++++++++++++++..+.+........ . ....+.
T Consensus 63 ~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (578)
T PRK05850 63 VILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD 142 (578)
T ss_pred EEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec
Confidence 99999999999999999999999999986 4578899999999999999999887766554322111 0 011111
Q ss_pred CCCCCCCCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc-c-----cCCCCeEEEec
Q 015313 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-E-----YTSADQFLHCL 218 (409)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~-----~~~~d~~l~~~ 218 (409)
... .. .. .........++++++++|||||||.||+|.++|++++..+....... . ...++++++.+
T Consensus 143 ~~~-~~------~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (578)
T PRK05850 143 LLD-LD------SP-RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWL 214 (578)
T ss_pred ccc-cc------cC-CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEEC
Confidence 000 00 00 00011234568999999999999999999999999988776654332 2 34578999999
Q ss_pred CchhHHHHHHHHHHHHhcCCEEEEccCc----chHHHHHHHHhhcCCCCCCccccceeeecchHHHHH-HHHhhhhhhHH
Q 015313 219 PLHHVHGLFNALLAPLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR-LIQGYEAMDTE 293 (409)
Q Consensus 219 pl~~~~g~~~~~~~~l~~G~~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~-l~~~~~~~~~~ 293 (409)
|++|..|++..++.++..|+++++.+.. ++..+++. ++++++++. .+|.++.. +......
T Consensus 215 pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~----------i~~~~~~~~-~~p~~~~~~~~~~~~~---- 279 (578)
T PRK05850 215 PFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQL----------LASNPHAFS-AAPNFAFELAVRKTSD---- 279 (578)
T ss_pred CCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHH----------HHHcCCeEE-eCCcHHHHHHHHhcch----
Confidence 9999999988899999999999998753 46677666 777899865 55655443 3332111
Q ss_pred HHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC------CccccccccccccccccccCCCC----------------
Q 015313 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEFVMAISNPLRGA---------------- 351 (409)
Q Consensus 294 ~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~------~~v~~~YG~tE~g~~~~~~~~~~---------------- 351 (409)
......+++++|.+++||+++++++.++|.+.|+ ..+++.||+||++..+.......
T Consensus 280 -~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 358 (578)
T PRK05850 280 -DDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGH 358 (578)
T ss_pred -hhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCc
Confidence 1112345678999999999999999999988773 36899999999875443211100
Q ss_pred ---------CCccccccccCCeEEEEeeCC-CCCCCCc-cceEEEeCcchhhhhcCCCcccchhh
Q 015313 352 ---------RKAGTVGNPLPGVQVKIAEDE-SGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 352 ---------~~~~~~G~p~~~~~~~ivd~~-~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
....++|.|. +.+++|+|++ +++++.| .|||+++|++++.|||++|+.|++.+
T Consensus 359 ~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f 422 (578)
T PRK05850 359 AKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTF 422 (578)
T ss_pred eEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHh
Confidence 0011334443 5789999965 5777777 89999999999999999999999886
No 96
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-45 Score=367.68 Aligned_cols=365 Identities=20% Similarity=0.288 Sum_probs=287.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCC---ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~---~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
+|+.+.|.+.+..+|+++|++++. +.+||+||.+++.++|.+|.+. .|+++||+|+++++|
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~gd~V~~~~~n 73 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDE----------------LGITGDQRVGSMMYN 73 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEEeCC
Confidence 578899999999999999998753 6999999999999999999862 489999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc-eeccCCCCCCC------
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVS------ 150 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 150 (409)
+++++++++||+++|++++|+++..+.+++.++++.++++++|+++.....+.+........ .+++.......
T Consensus 74 ~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 153 (576)
T PRK05620 74 CAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHM 153 (576)
T ss_pred CHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhcc
Confidence 99999999999999999999999999999999999999999999988777666554433211 11111100000
Q ss_pred -C------Cccccc-cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHH--HhhcccCCCCeEEEecCc
Q 015313 151 -S------ETTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML--TEAWEYTSADQFLHCLPL 220 (409)
Q Consensus 151 -~------~~~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~--~~~~~~~~~d~~l~~~pl 220 (409)
. .....+ ...........++++++++|||||||.||+|.++|+++....... ...+.+..++++++.+|+
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl 233 (576)
T PRK05620 154 PEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPI 233 (576)
T ss_pred ccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCCh
Confidence 0 000000 000011223456899999999999999999999999986544432 234677889999999999
Q ss_pred hhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhh
Q 015313 221 HHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (409)
Q Consensus 221 ~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~ 299 (409)
+|.+++.. .+.++..|+++++.. .+++..+++. ++++++|.+.++|.++..++..... ..
T Consensus 234 ~h~~g~~~-~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~ 294 (576)
T PRK05620 234 YHVLSWGV-PLAAFMSGTPLVFPGPDLSAPTLAKI----------IATAMPRVAHGVPTLWIQLMVHYLK--------NP 294 (576)
T ss_pred HHhhhhHH-HHHHHhcCceEEecCCCCCHHHHHHH----------HHHhcCceeeecCHHHHHHHHHhhc--------cC
Confidence 99999854 778899999999876 4688888888 7789999999999999988765221 11
Q ss_pred hhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC--------CCCccccccccCCeEEEEeeC
Q 015313 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--------ARKAGTVGNPLPGVQVKIAED 371 (409)
Q Consensus 300 ~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~--------~~~~~~~G~p~~~~~~~ivd~ 371 (409)
....++|.++.||+++++.+.++|.+.+++++++.||+||++......... .....++|++.++++++|+|+
T Consensus 295 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~ 374 (576)
T PRK05620 295 PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND 374 (576)
T ss_pred cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC
Confidence 233579999999999999999999999999999999999998654321110 112347899999999999997
Q ss_pred CCCCCC--Cc-cceEEEeCcchhhhhcCCCccc
Q 015313 372 ESGSDA--AG-VGEICVKSPSLFKEYWKLPKES 401 (409)
Q Consensus 372 ~~~~~~--~~-~Gel~v~g~~~~~gY~~~~~~t 401 (409)
++.++ ++ .|||+++|++++.|||++|+.|
T Consensus 375 -g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t 406 (576)
T PRK05620 375 -GQVMESTDRNEGEIQVRGNWVTASYYHSPTEE 406 (576)
T ss_pred -CccccCCCCCceEEEEEcCcccccccCCcccc
Confidence 66553 34 7999999999999999999988
No 97
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5e-46 Score=364.98 Aligned_cols=364 Identities=18% Similarity=0.212 Sum_probs=280.6
Q ss_pred HHhcccCCCeeEEEe--CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHH
Q 015313 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (409)
Q Consensus 8 ~~~~~~~~~~~a~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~ 85 (409)
..+++.+|+++|+++ +++.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~-----------------gv~~gd~V~i~~~n~~~~~~~~ 66 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDA-----------------GLRTGDVVALLSDNSPEALVVL 66 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHHHHHH
Confidence 356788999999987 368999999999999999999994 8999999999999999999999
Q ss_pred HHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhcc
Q 015313 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (409)
Q Consensus 86 ~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (409)
+||+++|++++|+++.++++++.++++.+++++++++................ ...+.. ..................
T Consensus 67 la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 67 WAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPL-RLSFGG--EIDGFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccce-EEEecC--cccccccHHHHhcccCCC
Confidence 99999999999999999999999999999999999987654433332211111 011100 000000000000000011
Q ss_pred CCCCCCcEEEEecCCCCCCCceeee--chHHHHHHH----HHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 166 GQRGEDPALIVYTSGTTGKPKGVVH--THKSIDAQV----QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~--t~~~l~~~~----~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
....++.++|+|||||||.||+|.+ +|.++.... ......+.+..+|++++.+|++|..++.. ....+..|++
T Consensus 144 ~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~ 222 (501)
T PRK13390 144 LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGT 222 (501)
T ss_pred CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCce
Confidence 1122357999999999999999995 455554321 11233567788999999999999998754 3345678999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+.+++..+++. ++++++|++.++|+++..+.+.... .....+++++|.++.||+++++++
T Consensus 223 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~~g~~~~~~~ 286 (501)
T PRK13390 223 VVLAKRFDAQATLGH----------VERYRITVTQMVPTMFVRLLKLDAD------VRTRYDVSSLRAVIHAAAPCPVDV 286 (501)
T ss_pred EEEcCCcCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhccch------hcccCChhhhheEEEcCCCCCHHH
Confidence 999998999999988 7889999999999999988764211 112235678999999999999999
Q ss_pred HHHHHHHhCCcccccccccccccccccc-CCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCC
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~-~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
.+.+.+.++.++++.||+||+++++... .......+++|+|+++ .++|+|+++++++.| .|||+++|++++.|||++
T Consensus 287 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 365 (501)
T PRK13390 287 KHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFERDRLPFRYLND 365 (501)
T ss_pred HHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEecCCccccccCC
Confidence 9999998899999999999998654322 2223456789999999 799999999998888 899999999999999999
Q ss_pred Ccccchhh----cccC
Q 015313 398 PKESRTLS----SCLY 409 (409)
Q Consensus 398 ~~~t~~~~----~g~~ 409 (409)
|++|++.+ +|||
T Consensus 366 ~~~t~~~~~~~~~~w~ 381 (501)
T PRK13390 366 PEKTAAAQHPAHPFWT 381 (501)
T ss_pred hhhhHHhhccCCCceE
Confidence 99998874 5685
No 98
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-45 Score=370.30 Aligned_cols=368 Identities=22% Similarity=0.262 Sum_probs=290.2
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
.++.+.|.++++++|+++|++++++.+||+||+++++++|..|.+. |+++|++|+++++|+++
T Consensus 37 ~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~-----------------g~~~gd~V~i~~~n~~~ 99 (600)
T PRK08279 37 RSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAAR-----------------GVGKGDVVALLMENRPE 99 (600)
T ss_pred ccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhc-----------------CCCCCCEEEEECCCCHH
Confidence 3688999999999999999999999999999999999999999994 89999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc-eeccCCCCC---CCCCcccc
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPN---VSSETTVF 156 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~ 156 (409)
++++++||+++|++++|+++..+.+++.++++.++++++|++++..+.+.......... ......... ........
T Consensus 100 ~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (600)
T PRK08279 100 YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLA 179 (600)
T ss_pred HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHh
Confidence 99999999999999999999999999999999999999999998877766554433221 111111000 00000000
Q ss_pred ------ccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 015313 157 ------DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (409)
Q Consensus 157 ------~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~ 230 (409)
.............+++++|+|||||||.||+|.++|+++...+.+....++++++|++++.+|++|..+++..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~ 259 (600)
T PRK08279 180 AAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAW 259 (600)
T ss_pred hhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHH
Confidence 00001111223568999999999999999999999999999999988888999999999999999999998778
Q ss_pred HHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEe
Q 015313 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (409)
Q Consensus 231 ~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~ 310 (409)
+.++..|+++++.+.+++..+++. ++++++|++.++|.+++.+++.... ......++|.+
T Consensus 260 ~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~l~~~l~~~~~~--------~~~~~~~l~~~-- 319 (600)
T PRK08279 260 SSVLAAGATLALRRKFSASRFWDD----------VRRYRATAFQYIGELCRYLLNQPPK--------PTDRDHRLRLM-- 319 (600)
T ss_pred HHHHhcCcEEEEcCCCCHHHHHHH----------HHHhcceEEeehHHHHHHHHhCCCC--------ccccCcceeEE--
Confidence 888999999999999999999888 7789999999999999988875221 11134567754
Q ss_pred eCCCCCHHHHHHHHHHhCC-ccccccccccccccccccCCCCCCccccccccC----CeE---------EEEeeCCCC--
Q 015313 311 GSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGARKAGTVGNPLP----GVQ---------VKIAEDESG-- 374 (409)
Q Consensus 311 gG~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~----~~~---------~~ivd~~~~-- 374 (409)
+|+.+++++.++|.+.++. .+++.||+||++...... ....+++|.+.+ +.. ..+.|.+++
T Consensus 320 ~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 396 (600)
T PRK08279 320 IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV---FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCI 396 (600)
T ss_pred ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc---CCCCcccccccccccccceeeeeccCcCceeeCCCCccc
Confidence 4778999999999999976 699999999988654432 234557777655 332 233444443
Q ss_pred CCCCc-cceEE--EeCcchhhhhcCCCcccchhh--------cccC
Q 015313 375 SDAAG-VGEIC--VKSPSLFKEYWKLPKESRTLS--------SCLY 409 (409)
Q Consensus 375 ~~~~~-~Gel~--v~g~~~~~gY~~~~~~t~~~~--------~g~~ 409 (409)
.++.| .|||+ ++|++++.|| ++|+.|++.+ ++||
T Consensus 397 ~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~ 441 (600)
T PRK08279 397 KVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWF 441 (600)
T ss_pred cCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceE
Confidence 35556 79998 7899999999 9999888763 5786
No 99
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=6.1e-45 Score=362.10 Aligned_cols=373 Identities=16% Similarity=0.242 Sum_probs=285.5
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+|+.+.+.+.++.+|+++|+++....+||+||.++++++|..|.+ +|+++||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~-----------------~g~~~gd~V~i~~~n~~~ 82 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAK-----------------RSIGPGSTVAVIAPNIPA 82 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 356788899999999999999998999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC---------CceeccCCCCCCC-
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG---------AKFSLIPPVPNVS- 150 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~- 150 (409)
++++++||+++|++++|+++..+.+++.++++.+++++++++++..+.......... ...+.+.......
T Consensus 83 ~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (567)
T PLN02479 83 MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPK 162 (567)
T ss_pred HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcc
Confidence 999999999999999999999999999999999999999999887665544322111 0111111100000
Q ss_pred C--------Cccccc---cchh--hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEe
Q 015313 151 S--------ETTVFD---QSQA--EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHC 217 (409)
Q Consensus 151 ~--------~~~~~~---~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~ 217 (409)
. .....+ .... ........++.++++|||||||.||+|.++|+++..........+++..++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T PLN02479 163 SLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWT 242 (567)
T ss_pred ccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 0 000000 0000 00011223467789999999999999999999987766666666778889999999
Q ss_pred cCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHH
Q 015313 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (409)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~ 297 (409)
+|++|..++...+...+..|.+++ +..+++..+++. ++++++|++.++|.++..+.++... .
T Consensus 243 ~p~~h~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~-------~ 304 (567)
T PLN02479 243 LPMFHCNGWCFTWTLAALCGTNIC-LRQVTAKAIYSA----------IANYGVTHFCAAPVVLNTIVNAPKS-------E 304 (567)
T ss_pred cchhhhhhHHHHHHHHhhcCceEe-ccCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhhhhh-------c
Confidence 999999987654444556666554 567889999988 7889999999999999998765211 1
Q ss_pred hhhhhccceEEEeeCCCCCHHHHHHHHHHhCCcccccccccccccccccc---C-------CC-CCCccccccccCCeE-
Q 015313 298 SASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP---L-------RG-ARKAGTVGNPLPGVQ- 365 (409)
Q Consensus 298 ~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~---~-------~~-~~~~~~~G~p~~~~~- 365 (409)
....+++++.++++|+++++.+.++|.+. +.++++.||+||+++.+... + .. .....+.|.+.+++.
T Consensus 305 ~~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~ 383 (567)
T PLN02479 305 TILPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEG 383 (567)
T ss_pred ccccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCc
Confidence 11246889999999999999999998876 88999999999986543211 0 00 011235788888875
Q ss_pred EEEeeC-CCCCCCC--c-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 366 VKIAED-ESGSDAA--G-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 366 ~~ivd~-~~~~~~~--~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++|+|+ ++++++. + .|||+++|++++.|||++|+.|++. .+|||
T Consensus 384 ~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~ 432 (567)
T PLN02479 384 LDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWF 432 (567)
T ss_pred eeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCCce
Confidence 899994 4666653 2 6999999999999999999999998 68887
No 100
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=7.8e-46 Score=431.46 Aligned_cols=356 Identities=22% Similarity=0.333 Sum_probs=299.8
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|.++++.+||++|++++++.+||+||.++++++|+.|.+. |+++|++|++++++++++
T Consensus 1132 ~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~i~~~~s~~~ 1194 (4334)
T PRK05691 1132 WLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDK-----------------GVGPDVCVAIAAERSPQL 1194 (4334)
T ss_pred CHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 478899999999999999999999999999999999999999995 899999999999999999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
+++++|++++|++++|+++.++.+++.+++++++++++|++++....+.... ........... .. .....
T Consensus 1195 iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~-~~------~~~~~ 1264 (4334)
T PRK05691 1195 LVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAE---GVSAIALDSLH-LD------SWPSQ 1264 (4334)
T ss_pred HHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccccc---CceEEeecccc-cc------ccCCC
Confidence 9999999999999999999999999999999999999999987654332210 11111111000 00 00000
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......++++++++|||||||.||||.++|+++.+.+.+....++++++|+++...|++|..+++ .++.+|..|++++
T Consensus 1265 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~ 1343 (4334)
T PRK05691 1265 APGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVW-ECFWPLITGCRLV 1343 (4334)
T ss_pred CCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHH-HHHHHHhCCCEEE
Confidence 111234578999999999999999999999999999999988889999999999999999988875 5899999999999
Q ss_pred EccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
+.+. .++..+++. ++++++|++.++|++++.+.+.. ....+++||.+++||++++++
T Consensus 1344 i~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~----------~~~~~~~lr~~~~gGe~l~~~ 1403 (4334)
T PRK05691 1344 LAGPGEHRDPQRIAEL----------VQQYGVTTLHFVPPLLQLFIDEP----------LAAACTSLRRLFSGGEALPAE 1403 (4334)
T ss_pred EcCccccCCHHHHHHH----------HHHcCCeEEECcHHHHHHHHhCc----------ccccCCcccEEEEeecCCCHH
Confidence 9863 567788877 78899999999999999987641 123578899999999999999
Q ss_pred HHHHHHHHh-CCcccccccccccccccccc--CCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhh
Q 015313 319 VMQQWETIT-GHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEY 394 (409)
Q Consensus 319 ~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~--~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY 394 (409)
+.++|.+.+ +++++|.||+||+++.++.. ........++|+|+++++++|+|+++++++.| +|||+++|+++++||
T Consensus 1404 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G~~v~~GY 1483 (4334)
T PRK05691 1404 LRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAELNLLPPGVAGELCIGGAGLARGY 1483 (4334)
T ss_pred HHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCCCCCCCCCCceEEEecCcccchhh
Confidence 999999988 68999999999998655432 12233456899999999999999999999998 899999999999999
Q ss_pred cCCCcccchhh
Q 015313 395 WKLPKESRTLS 405 (409)
Q Consensus 395 ~~~~~~t~~~~ 405 (409)
+|+|+.|++.|
T Consensus 1484 l~~p~~t~~~f 1494 (4334)
T PRK05691 1484 LGRPALTAERF 1494 (4334)
T ss_pred cCCccccHhhC
Confidence 99999999875
No 101
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-45 Score=361.56 Aligned_cols=371 Identities=19% Similarity=0.290 Sum_probs=288.4
Q ss_pred ChHHHHHHHhcccCCCeeEEEe--C--CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRA--D--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~--~--~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
+++.+.|+.+++++||++++.. + .+++||+||.++++++|++|.+. |+++||+|+++++
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~-----------------g~~~gd~v~i~~~ 72 (542)
T PRK06018 10 LLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRD-----------------GIKLGDRVATIAW 72 (542)
T ss_pred CCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcC
Confidence 4678999999999999999985 2 36899999999999999999995 8999999999999
Q ss_pred CCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-Cce-eccCCCCCCCCCc-
Q 015313 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AKF-SLIPPVPNVSSET- 153 (409)
Q Consensus 77 ~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~- 153 (409)
|+++++++++||+++|++++|+++..+.+++.++++.++++.++++.++.+.+........ ... ..+..........
T Consensus 73 ~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (542)
T PRK06018 73 NTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTL 152 (542)
T ss_pred CchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCc
Confidence 9999999999999999999999999999999999999999999999887776665543322 111 1111111100000
Q ss_pred ----cccc---c-chhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHH-H-HHHHHHhhcccCCCCeEEEecCchhH
Q 015313 154 ----TVFD---Q-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID-A-QVQMLTEAWEYTSADQFLHCLPLHHV 223 (409)
Q Consensus 154 ----~~~~---~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~-~-~~~~~~~~~~~~~~d~~l~~~pl~~~ 223 (409)
...+ . ..........++++++++|||||||.||+|.+||++.+ . ........+++..+|+++...|++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~ 232 (542)
T PRK06018 153 KNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHA 232 (542)
T ss_pred cccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHH
Confidence 0000 0 00001123356789999999999999999999999743 2 22333456678889999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhh
Q 015313 224 HGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAA 302 (409)
Q Consensus 224 ~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~ 302 (409)
.++.. .+.++..|+++++.. .+++..+++. ++++++|++.++|+++..+.+..+. ...++
T Consensus 233 ~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~ 293 (542)
T PRK06018 233 NSWGI-AFSAPSMGTKLVMPGAKLDGASVYEL----------LDTEKVTFTAGVPTVWLMLLQYMEK--------EGLKL 293 (542)
T ss_pred hhhHH-HHhhhhcCceEEccCcCCCHHHHHHH----------HHhcCCceeecCcHHHHHHHhcccc--------cCCCc
Confidence 88754 567789999998864 4677888887 7789999999999999999875332 12356
Q ss_pred ccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC-----------CCCccccccccCCeEEEEeeC
Q 015313 303 KQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----------ARKAGTVGNPLPGVQVKIAED 371 (409)
Q Consensus 303 ~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~-----------~~~~~~~G~p~~~~~~~ivd~ 371 (409)
+++|.+++||+++++++.++|++ +++++++.||+||++.+....... .....++|+|.++++++|+|+
T Consensus 294 ~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~ 372 (542)
T PRK06018 294 PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD 372 (542)
T ss_pred ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC
Confidence 78999999999999999999999 899999999999998654422100 012357899999999999999
Q ss_pred CCCCCCC--c-cceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 372 ESGSDAA--G-VGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 372 ~~~~~~~--~-~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
+++.++. + .|||+++|++++.|||++.. .....+|||
T Consensus 373 ~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~~-~~~~~~~~~ 412 (542)
T PRK06018 373 AGKELPWDGKTFGRLKVRGPAVAAAYYRVDG-EILDDDGFF 412 (542)
T ss_pred CCCCCCCCCCceeEEEEecCCcchhhhcCcc-cEecCCcEE
Confidence 9987754 2 69999999999999999432 222256776
No 102
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-45 Score=361.90 Aligned_cols=369 Identities=19% Similarity=0.279 Sum_probs=285.8
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCC---ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~---~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~ 77 (409)
+++.+.|..+++.+|+.+++..++ +.+||.||+.++.++|..|.+. |+++||+|+++++|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~-----------------gi~~gd~V~l~~~n 83 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLAL-----------------GLKPGDRVALIAET 83 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCC
Confidence 367899999999998887664332 6799999999999999999984 89999999999999
Q ss_pred CHHHHHHHHHHHhhCcEEEeCCCCCC-------hHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCC
Q 015313 78 SFEFVAGVLGTWFSGCIAVPLALSYP-------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS 150 (409)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~~~i~~~~~-------~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (409)
+++++++++||+++|++++|+++..+ .+++.++++.+++++++++++..+.+........... . .......
T Consensus 84 ~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 161 (579)
T PRK09192 84 DGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLH-V-LSHAWFK 161 (579)
T ss_pred chhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccc-e-eehhhhc
Confidence 99999999999999999999976443 5789999999999999999887766655432221111 0 0000000
Q ss_pred CCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHh-hcccCCCCeEEEecCchhHHHHHHH
Q 015313 151 SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFLHCLPLHHVHGLFNA 229 (409)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~d~~l~~~pl~~~~g~~~~ 229 (409)
.. . ......+...++++++++|||||||.||+|.++|+++...+..... .+++..+|+++..+|++|..+++..
T Consensus 162 ~~---~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 236 (579)
T PRK09192 162 AL---P--EADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGF 236 (579)
T ss_pred cc---C--CCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHH
Confidence 00 0 0001112345689999999999999999999999999998887777 7888999999999999999999877
Q ss_pred HHHHHhcCCEEEEccC----cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccc
Q 015313 230 LLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (409)
Q Consensus 230 ~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~l 305 (409)
++.++..|+++++.+. .++..+++. +.+++++.++..|.++..+...... ......+++++
T Consensus 237 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~l~~~~~~~-----~~~~~~~l~~l 301 (579)
T PRK09192 237 LLTPVATQLSVDYLPTRDFARRPLQWLDL----------ISRNRGTISYSPPFGYELCARRVNS-----KDLAELDLSCW 301 (579)
T ss_pred HHHHHHhCCeeEeeCHHHHHHCHHHHHHH----------HHhcCcEEEeCCcHHHHHHHHhhcc-----ccccccchhhh
Confidence 8888999999987663 246667776 7789999877766555554432111 11223567899
Q ss_pred eEEEeeCCCCCHHHHHHHHHHhC------CccccccccccccccccccCCCC----------------------------
Q 015313 306 RLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEFVMAISNPLRGA---------------------------- 351 (409)
Q Consensus 306 r~v~~gG~~~~~~~~~~~~~~~~------~~v~~~YG~tE~g~~~~~~~~~~---------------------------- 351 (409)
|.+++||+++++.+.+++.+.++ ..+++.||+||+++.+.......
T Consensus 302 r~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (579)
T PRK09192 302 RVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRV 381 (579)
T ss_pred heeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccc
Confidence 99999999999999999988873 35899999999976544322110
Q ss_pred CCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh--hcccC
Q 015313 352 RKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL--SSCLY 409 (409)
Q Consensus 352 ~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~ 409 (409)
....++|+|+|+++++|+|++++.++.+ .|||+++|+++++|||++ +.+.+. .||||
T Consensus 382 ~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~ 441 (579)
T PRK09192 382 RTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWL 441 (579)
T ss_pred eeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCcee
Confidence 1135789999999999999999888877 899999999999999999 556555 58887
No 103
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=9.5e-45 Score=387.95 Aligned_cols=367 Identities=21% Similarity=0.324 Sum_probs=288.8
Q ss_pred hHHHHHHHhcccCC-CeeEEEe-CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMAR-DSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~-~~~a~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.+.+.++++| +++|+.+ +++++||+||+++++++|+.|.+ |+++||+|+++++|++
T Consensus 632 ~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~------------------g~~~gd~V~i~~~n~~ 693 (1140)
T PRK06814 632 TLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK------------------NTPPGENVGVMLPNAN 693 (1140)
T ss_pred CHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh------------------cCCCCCeEEEEcCCch
Confidence 35667777888876 6788776 46899999999999999999975 8899999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH--HHhhccC--CceeccCCCCCCCC-Ccc
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ--NVASKSG--AKFSLIPPVPNVSS-ETT 154 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~-~~~ 154 (409)
+++++++||+++|++++|+++..+.+++.++++++++++++++++..+... ....... ...+.+........ ...
T Consensus 694 ~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 773 (1140)
T PRK06814 694 GAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADK 773 (1140)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHH
Confidence 999999999999999999999999999999999999999999987654321 1111111 11111111100000 000
Q ss_pred ccc----cchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 015313 155 VFD----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (409)
Q Consensus 155 ~~~----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~ 230 (409)
... .......+...++|+++++|||||||.||+|.++|+++..........++.+++|++++.+|++|..++...+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 853 (1140)
T PRK06814 774 IKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGL 853 (1140)
T ss_pred HHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHH
Confidence 000 0000001124678999999999999999999999999999888888888899999999999999999997778
Q ss_pred HHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEE
Q 015313 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (409)
Q Consensus 231 ~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~ 309 (409)
+.++..|+++++.+. .+...+.+. ++++++|++.++|++++.+.+.. ...+++++|.++
T Consensus 854 ~~~l~~G~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~----------~~~~~~~lr~v~ 913 (1140)
T PRK06814 854 VLPLLSGVKVFLYPSPLHYRIIPEL----------IYDTNATILFGTDTFLNGYARYA----------HPYDFRSLRYVF 913 (1140)
T ss_pred HHHHHcCCEEEEecCcccHHHHHHH----------HHhcCCEEEEecHHHHHHHHhhc----------ccccccceeEEE
Confidence 899999999998874 345555565 77899999999999999887641 234578899999
Q ss_pred eeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcc
Q 015313 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPS 389 (409)
Q Consensus 310 ~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~ 389 (409)
+||+++++++.+.+.+.+++++++.||+||++..+........+.+++|+|+|+++++++|.++. ++.|||+++|++
T Consensus 914 ~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~~~~---~~~Gel~v~g~~ 990 (1140)
T PRK06814 914 AGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPVPGI---DEGGRLFVRGPN 990 (1140)
T ss_pred EcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCCCCCCcCCccCCCCeEEEeecCCC---CCceEEEEeCCC
Confidence 99999999999999999999999999999998765543333456779999999999999886531 236999999999
Q ss_pred hhhhhcCCCcccch--hhcccC
Q 015313 390 LFKEYWKLPKESRT--LSSCLY 409 (409)
Q Consensus 390 ~~~gY~~~~~~t~~--~~~g~~ 409 (409)
++.|||++++.+.. ..||||
T Consensus 991 ~~~gY~~~~~~~~~~~~~~g~~ 1012 (1140)
T PRK06814 991 VMLGYLRAENPGVLEPPADGWY 1012 (1140)
T ss_pred cchhhcCCCCCCccccCCCCeE
Confidence 99999998764432 258897
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-44 Score=354.68 Aligned_cols=366 Identities=18% Similarity=0.204 Sum_probs=287.6
Q ss_pred HHhcccCCCeeEEEe--CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHH
Q 015313 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (409)
Q Consensus 8 ~~~~~~~~~~~a~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~ 85 (409)
..+++.+||++|+++ .++.+||.||.+++.++|+.|.+. |+++|++|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~-----------------g~~~~~~V~v~~~~~~~~~~~~ 66 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSL-----------------GLKRGDHVAIFMENNLRYLEVC 66 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHHHHHH
Confidence 467788999999987 577899999999999999999994 8899999999999999999999
Q ss_pred HHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc--eeccCCCCCCCCCccccccchhh-
Q 015313 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVSSETTVFDQSQAE- 162 (409)
Q Consensus 86 ~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~- 162 (409)
+||+++|++++|+++..+.+++.++++.++++.++++......+.......... .+.....................
T Consensus 67 ~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 67 WAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLP 146 (511)
T ss_pred HHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCC
Confidence 999999999999999999999999999999999999987766655544333211 11111100000000000000000
Q ss_pred hccCCCCCCcEEEEecCCCCCCCceeee--chHHHHH---HHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcC
Q 015313 163 KMDGQRGEDPALIVYTSGTTGKPKGVVH--THKSIDA---QVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (409)
Q Consensus 163 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~--t~~~l~~---~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G 237 (409)
.......++.++++|||||||.||+|.+ +|.++.. ........+.+.+++++++..|++|..++. ..+.++..|
T Consensus 147 ~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g 225 (511)
T PRK13391 147 ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLG 225 (511)
T ss_pred CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcC
Confidence 0111233467899999999999999995 4555432 233344566778899999999999998885 467789999
Q ss_pred CEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCH
Q 015313 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (409)
Q Consensus 238 ~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~ 317 (409)
+++++.+.+++..+++. ++++++|++.++|.++..+.+.... .....+++++|.+++||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 226 GTVIVMEHFDAEQYLAL----------IEEYGVTHTQLVPTMFSRMLKLPEE------VRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred ceEEECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCchh------hcccCCccceeEEEEccCCCCH
Confidence 99999999999999988 7889999999999999988764211 1123457899999999999999
Q ss_pred HHHHHHHHHhCCccccccccccccccccccC-CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhc
Q 015313 318 PVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYW 395 (409)
Q Consensus 318 ~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~ 395 (409)
++.+++.+.+|..+++.||+||++++..... ......+++|+|+++ .++|+|+++++++.| .|||+++|+ ++.|||
T Consensus 290 ~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~Gel~~~g~-~~~gy~ 367 (511)
T PRK13391 290 QVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEPGTIWFEGG-RPFEYL 367 (511)
T ss_pred HHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEecC-cceEEc
Confidence 9999999988999999999999987654322 223456789999999 699999999888888 799999999 888999
Q ss_pred CCCcccchhhc---ccC
Q 015313 396 KLPKESRTLSS---CLY 409 (409)
Q Consensus 396 ~~~~~t~~~~~---g~~ 409 (409)
++|+.+++.++ |||
T Consensus 368 ~~~~~~~~~~~~~~~w~ 384 (511)
T PRK13391 368 NDPAKTAEARHPDGTWS 384 (511)
T ss_pred CChhHhHHhhccCCCEE
Confidence 99999988743 886
No 105
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.3e-44 Score=352.52 Aligned_cols=367 Identities=21% Similarity=0.310 Sum_probs=285.0
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+|+.+.|.+.++++||++|+.++++.+||.||.++++++|++|.+ +|+++||+|+++++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~-----------------~g~~~~~~v~v~~~n~~~ 65 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIA-----------------QGLGPGDHVGIYARNRIE 65 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578999999999999999999999999999999999999999998 489999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc--eeccCCCCCCC------CC
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVS------SE 152 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~ 152 (409)
++++++||+++|++++|+++.++.+++.++++++++++++++.+....+.++....... .+.+....... ..
T Consensus 66 ~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (533)
T PRK07798 66 YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDY 145 (533)
T ss_pred HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccH
Confidence 99999999999999999999999999999999999999999988777766654432211 11111111000 00
Q ss_pred ccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---------cc------CCCCeEEEe
Q 015313 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---------EY------TSADQFLHC 217 (409)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---------~~------~~~d~~l~~ 217 (409)
..................+.++++|||||||.||+|+++|+++..........+ .. ..+++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 146 EDALAAGSPERDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHHhccCCcCCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 000000000111112234557999999999999999999999976554432211 11 466899999
Q ss_pred cCchhHHHHHHHHHHHHhcCCEEEEcc--CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHH-HHHhhhhhhHHH
Q 015313 218 LPLHHVHGLFNALLAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR-LIQGYEAMDTEL 294 (409)
Q Consensus 218 ~pl~~~~g~~~~~~~~l~~G~~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~-l~~~~~~~~~~~ 294 (409)
+|++|..+++ .++.++..|+++++.+ .+++..+++. ++++++|.+.++|..+.. +.+.+.
T Consensus 226 ~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~~------ 288 (533)
T PRK07798 226 PPLMHGAGQW-AAFAALFSGQTVVLLPDVRFDADEVWRT----------IEREKVNVITIVGDAMARPLLDALE------ 288 (533)
T ss_pred cchhhhhhHH-HHHHHHhcCceEEEecCCCcCHHHHHHH----------HHHhCCeEEEechHHHHHHHHHHhc------
Confidence 9999999996 5889999999999999 7889999888 777999999999876643 443322
Q ss_pred HHHhhhhhccceEEEeeCCCCCHHHHHHHHHHh-CCccccccccccccccccccCCCCCCccccc--cccCCeEEEEeeC
Q 015313 295 QAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAGTVG--NPLPGVQVKIAED 371 (409)
Q Consensus 295 ~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G--~p~~~~~~~ivd~ 371 (409)
.....+++++|.+++||+++++++.+++.+.+ +..+++.||+||++......... .....| .+.++..++|+|+
T Consensus 289 -~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~--~~~~~g~~~~~~~~~~~i~~~ 365 (533)
T PRK07798 289 -ARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK--GAVHTGGPRFTIGPRTVVLDE 365 (533)
T ss_pred -ccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCC--CCccCCCCccCCCceEEEECC
Confidence 11234678999999999999999999999988 78999999999997554432211 112333 7788999999999
Q ss_pred CCCCCCCc-c--ceEEEeCcchhhhhcCCCcccchhh
Q 015313 372 ESGSDAAG-V--GEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 372 ~~~~~~~~-~--Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
++++++.| . |+| ++++.++.|||++|+.|++.+
T Consensus 366 ~~~~~~~g~~~~g~l-~~~~~~~~gy~~~~~~t~~~f 401 (533)
T PRK07798 366 DGNPVEPGSGEIGWI-ARRGHIPLGYYKDPEKTAETF 401 (533)
T ss_pred CCCCCCCCCCCeeEE-EeecCccccccCChhhhHHhh
Confidence 99988776 4 555 567789999999999998875
No 106
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.1e-44 Score=350.04 Aligned_cols=357 Identities=23% Similarity=0.319 Sum_probs=281.7
Q ss_pred eEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEe
Q 015313 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (409)
Q Consensus 18 ~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~ 97 (409)
.|++.+++.+||.||.++++++|+.|.+. |+++|++|+++++|+++++++++||+++|+++++
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~-----------------g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~ 65 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAAL-----------------GVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVP 65 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 47778889999999999999999999994 8999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCC-------------CCc-cccccc-hhh
Q 015313 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS-------------SET-TVFDQS-QAE 162 (409)
Q Consensus 98 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~~~~-~~~ 162 (409)
+++..+.+++.++++++++++++++.+....+...... ....+......... ... ...+.. ...
T Consensus 66 l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (509)
T PRK12406 66 VNWHFKPEEIAYILEDSGARVLIAHADLLHGLASALPA-GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE 144 (509)
T ss_pred cCcccCHHHHHHHHhccCCcEEEEccchhhhhhhhhhc-ccceeecccccccccccccccccccCCCCccCHHHHhcccC
Confidence 99999999999999999999999998766554332211 11111111000000 000 000000 000
Q ss_pred hccCCCCCCcEEEEecCCCCCCCceeeechHHH---HHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSI---DAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 163 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l---~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
.......+++++++|||||||.||+|.++|... ..........+++..++++++.+|++|..+... .+.++..|++
T Consensus 145 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~ 223 (509)
T PRK12406 145 PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGV 223 (509)
T ss_pred ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheE
Confidence 112235689999999999999999999876554 333334455677889999999999999888765 4456889999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+.+++..+++. ++++++|.+.++|.++..+++.... .....+++++|.++.||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~~~~~~~ 287 (509)
T PRK12406 224 LVLQPRFDPEELLQL----------IERHRITHMHMVPTMFIRLLKLPEE------VRAKYDVSSLRHVIHAAAPCPADV 287 (509)
T ss_pred EEEccCCCHHHHHHH----------HHHcCCeEEEccHHHHHHHHhCchh------hcccCCCCceeEEEEcCCCCCHHH
Confidence 999988899999888 7889999999999999998764221 112345789999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccccC-CCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhh-hhcC
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFK-EYWK 396 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~~-~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~-gY~~ 396 (409)
.+++.+.+++.+++.||+||++.+++... +....++++|.|+++++++|+|+++++++.| .|||+++|++++. ||++
T Consensus 288 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~~~y~~ 367 (509)
T PRK12406 288 KRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRIAGNPDFTYHN 367 (509)
T ss_pred HHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEECCccccccccC
Confidence 99999999999999999999997665432 2234567899999999999999999888888 8999999998875 9999
Q ss_pred CCcccchh-hcccC
Q 015313 397 LPKESRTL-SSCLY 409 (409)
Q Consensus 397 ~~~~t~~~-~~g~~ 409 (409)
+|+.+++. .||||
T Consensus 368 ~~~~~~~~~~~~~~ 381 (509)
T PRK12406 368 KPEKRAEIDRGGFI 381 (509)
T ss_pred CchhcccccCCCCe
Confidence 99998887 88887
No 107
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-43 Score=351.12 Aligned_cols=372 Identities=19% Similarity=0.239 Sum_probs=284.6
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
|+..+.|++.++.+|+++|+.+.+..+||+||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~v~i~~~~~~~ 80 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALAR-----------------RGIGRGDTVAVLLPNIPA 80 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCchH
Confidence 567789999999999999999999999999999999999999998 489999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc-eeccCCCCCCC---------
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVS--------- 150 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------- 150 (409)
++++++||+++|++++|+++..+.+++.++++.++++.++++.+....+.+........ ...+.......
T Consensus 81 ~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (545)
T PRK08162 81 MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGAL 160 (545)
T ss_pred HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccc
Confidence 99999999999999999999999999999999999999999998877665543332221 11111110000
Q ss_pred CCccccccc-hhhh-ccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH
Q 015313 151 SETTVFDQS-QAEK-MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (409)
Q Consensus 151 ~~~~~~~~~-~~~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 228 (409)
......... .... ....+.+++++++|||||||.||+|.++|+++..........+.+..++++++.+|++|..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~ 240 (545)
T PRK08162 161 DYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCF 240 (545)
T ss_pred cHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHH
Confidence 000000000 0000 01123457899999999999999999999988766666566667888899999999999998765
Q ss_pred HHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEE
Q 015313 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (409)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v 308 (409)
.++. .+.|++.++...+++..+++. ++++++|++.++|.++..|++.... ....+...+.+
T Consensus 241 ~~~~-~~~~g~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~~~~~ 301 (545)
T PRK08162 241 PWTV-AARAGTNVCLRKVDPKLIFDL----------IREHGVTHYCGAPIVLSALINAPAE--------WRAGIDHPVHA 301 (545)
T ss_pred HHHH-HHHccEEEEeCCCCHHHHHHH----------HHHcCCeEEEechHHHHHHHhCccc--------cccCCccceEE
Confidence 4443 445666666677899999998 7889999999999999999875221 11223456677
Q ss_pred EeeCCCCCHHHHHHHHHHhCCccccccccccccccccccCCC-----------CCCccccccccCC-eEEEEeeC-CCCC
Q 015313 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG-----------ARKAGTVGNPLPG-VQVKIAED-ESGS 375 (409)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~-----------~~~~~~~G~p~~~-~~~~ivd~-~~~~ 375 (409)
+++|+++++++.+.+.+. ++++++.||+||+++....+... .....++|.+.+. ..++|+|+ ++++
T Consensus 302 ~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 380 (545)
T PRK08162 302 MVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQP 380 (545)
T ss_pred EECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcc
Confidence 899999999999988764 89999999999986543322100 1123456766543 36889995 5666
Q ss_pred CCC-c--cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 376 DAA-G--VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 376 ~~~-~--~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++. | .|||+++|+.++.|||++++.|++. .+|||
T Consensus 381 ~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~ 418 (545)
T PRK08162 381 VPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGWF 418 (545)
T ss_pred cCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCCc
Confidence 654 3 5999999999999999999999988 67897
No 108
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=4.2e-44 Score=342.43 Aligned_cols=333 Identities=24% Similarity=0.386 Sum_probs=272.9
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHH
Q 015313 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (409)
Q Consensus 28 Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~ 107 (409)
||.||.+.++++|+.|.+. .|+++||+|+++++|+++++++++||+.+|++++|+++..+.+++
T Consensus 1 t~~~l~~~~~~~a~~l~~~----------------~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~ 64 (408)
T TIGR01733 1 TYRELDERANRLARHLRAA----------------GGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERL 64 (408)
T ss_pred CHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHH
Confidence 7999999999999999983 389999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhccCCCCCCcEEEEecCCCCCCCce
Q 015313 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (409)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 187 (409)
.++++++++++++++++....+..... ....+........ ... ............+++++++|||||||.||+
T Consensus 65 ~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~ 137 (408)
T TIGR01733 65 AFILEDAGARLLLTDSALASRLAGLVL----PIILVDPLELAAL-DDA--PAPPPPDAPSGPDDLAYVIYTSGSTGRPKG 137 (408)
T ss_pred HHHHHhcCCCEEEEcCchhhhccccCC----ceEEechhhhhhc-ccc--cccccccCCCCCCCcEEEEEcCCCCCCCCE
Confidence 999999999999999876655433211 1111110000000 000 000000111346889999999999999999
Q ss_pred eeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcch---HHHHHHHHhhcCCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV---RGIWQRWRESYPVNGN 264 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~---~~~~~~~~~~~~~~~~ 264 (409)
|.++|+++..........+....+|++++..|++|..+++ .++.++..|+++++.++... ..+.+.
T Consensus 138 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~---------- 206 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAAL---------- 206 (408)
T ss_pred EEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------
Confidence 9999999999999888888888999999999999999985 58999999999999887544 555555
Q ss_pred CccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC-Ccccccccccccccc
Q 015313 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMA 343 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~-~~v~~~YG~tE~g~~ 343 (409)
++++++|.+.++|.+++.+.+... ..++++|.+++||+++++++.+++.+.++ +.+++.||+||++.+
T Consensus 207 ~~~~~~t~l~~~p~~~~~l~~~~~-----------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~ 275 (408)
T TIGR01733 207 IAEHPVTVLNLTPSLLALLAAALP-----------PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVW 275 (408)
T ss_pred HHHcCceEEEeCHHHHHHHHHhhh-----------hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEE
Confidence 777899999999999999987521 46789999999999999999999999997 899999999999876
Q ss_pred ccccC---CCCC--CccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh
Q 015313 344 ISNPL---RGAR--KAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS 405 (409)
Q Consensus 344 ~~~~~---~~~~--~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~ 405 (409)
+.... .... ...++|.|.++++++|+|++++.++.| .|||+++|++++.||+++|+.|++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~ 343 (408)
T TIGR01733 276 STATLVDADDAPRESPVPIGRPLANTRLYVLDDDLRPVPVGVVGELYIGGPGVARGYLNRPELTAERF 343 (408)
T ss_pred EEEEEcCccccCCccccccCcccCCceEEEECCCCCCCCCCCceEEEecCccccccccCChhhhhcce
Confidence 64211 1111 267899999999999999998888887 89999999999999999999998773
No 109
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-44 Score=348.98 Aligned_cols=356 Identities=19% Similarity=0.218 Sum_probs=280.0
Q ss_pred eEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEe
Q 015313 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (409)
Q Consensus 18 ~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~ 97 (409)
.++.+.++.+||.||.+.+.++|+.|.+. |+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 65 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRAL-----------------GLREGDVVAILLENNPEFFEVYWAARRSGLYYTP 65 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEe
Confidence 45566789999999999999999999995 8999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC--CceeccCCCCCCCCCccccccch-hhhccCCCCCCcEE
Q 015313 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNVSSETTVFDQSQ-AEKMDGQRGEDPAL 174 (409)
Q Consensus 98 i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 174 (409)
+++..+.+++.++++++++++++++++....+.+...... ........... .......+... .........++.++
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~ 144 (502)
T PRK08276 66 INWHLTAAEIAYIVDDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPV-PGFRSYEEALAAQPDTPIADETAGAD 144 (502)
T ss_pred cccccCHHHHHHHHhcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCC-CccccHHHHHhcCCCCCCCCCCcceE
Confidence 9999999999999999999999999887766655443322 11111111100 00000000000 01111234567899
Q ss_pred EEecCCCCCCCceeeechHHHHHHH------HHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcch
Q 015313 175 IVYTSGTTGKPKGVVHTHKSIDAQV------QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248 (409)
Q Consensus 175 i~~TSGtTG~pK~v~~t~~~l~~~~------~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~ 248 (409)
++|||||||.||+|.++|.++.... ...........++++++..|++|..++.. .+.++..|+++++.+.+++
T Consensus 145 i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 223 (502)
T PRK08276 145 MLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDA 223 (502)
T ss_pred EEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCH
Confidence 9999999999999999988765332 11222222346789999999999998865 4578999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhC
Q 015313 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG 328 (409)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~ 328 (409)
..+++. ++++++|++.++|+++..+++..... ....+++++|.+++||++++.++.+.+.+.++
T Consensus 224 ~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~ 287 (502)
T PRK08276 224 EEALAL----------IERYRVTHSQLVPTMFVRMLKLPEEV------RARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG 287 (502)
T ss_pred HHHHHH----------HHHhCCeEEEehHHHHHHHHhCcccc------CCCCCcccceEEEecCCCCCHHHHHHHHHHhC
Confidence 999888 78899999999999999998752211 12346789999999999999999999999999
Q ss_pred Cccccccccccccccccc-cCCCCCCccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchhh-
Q 015313 329 HRLLERYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTLS- 405 (409)
Q Consensus 329 ~~v~~~YG~tE~g~~~~~-~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~~- 405 (409)
..+++.||+||++.+++. ........+++|+|+ ++.++|+|+++++++.| .|||+++|++++.|||++|+++++.+
T Consensus 288 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 366 (502)
T PRK08276 288 PIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARN 366 (502)
T ss_pred cHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhc
Confidence 999999999999875543 222234567899999 88999999988888887 89999999999999999999999883
Q ss_pred -cccC
Q 015313 406 -SCLY 409 (409)
Q Consensus 406 -~g~~ 409 (409)
||||
T Consensus 367 ~~~~~ 371 (502)
T PRK08276 367 PHGWV 371 (502)
T ss_pred CCCce
Confidence 3887
No 110
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-43 Score=343.14 Aligned_cols=331 Identities=24% Similarity=0.332 Sum_probs=273.0
Q ss_pred ChHHHHH-HHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 1 MEVFKAA-YKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 1 ~~~~~~l-~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
|++.+.+ ...++.+|+++|++++++.+||.||.++++++|..|.+. |+.+|++|+++++|++
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------g~~~~~~v~l~~~~~~ 64 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQ-----------------GVVEGSGVALRGKNSP 64 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEecCCCH
Confidence 3445555 445788999999999999999999999999999999995 8899999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccc
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (409)
+++++++||+++|++++|+++..+.+++.++++++++++++++++... +... .. .... ..
T Consensus 65 ~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~-~~-----~~~~--------~~----- 124 (458)
T PRK09029 65 ETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL-TS-----LHLQ--------LV----- 124 (458)
T ss_pred HHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc-cc-----cccc--------cc-----
Confidence 999999999999999999999999999999999999999999876422 1110 00 0000 00
Q ss_pred hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCE
Q 015313 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (409)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~ 239 (409)
.........++++++++|||||||.||+|.++|++++..+......++...+|+++..+|++|.+++. .++.++..|++
T Consensus 125 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~ 203 (458)
T PRK09029 125 EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGAT 203 (458)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhH-HHHHHHhCCce
Confidence 00111234578899999999999999999999999999998888888899999999999999999985 46778999999
Q ss_pred EEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHH
Q 015313 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (409)
Q Consensus 240 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~ 319 (409)
+++.+. ..+++. + .++|.+..+|+++..++..... ..++|.+++||+++++.+
T Consensus 204 v~~~~~---~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~~------------~~~l~~i~~gG~~~~~~~ 256 (458)
T PRK09029 204 LVVRDK---QPLEQA----------L--AGCTHASLVPTQLWRLLDNRSE------------PLSLKAVLLGGAAIPVEL 256 (458)
T ss_pred EEeCCh---HHHHHH----------H--hhceeeecChHHHHHHHhcccc------------CCcceEEEECCCCCCHHH
Confidence 998775 344444 3 3789999999999988765211 346999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCc
Q 015313 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPK 399 (409)
Q Consensus 320 ~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~ 399 (409)
.+++.+. ++++++.||+||++...+.... ....++|+|+++++++|+| |||+++|++++.|||++|+
T Consensus 257 ~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~--~~~~~~G~~~~~~~~~i~~----------gel~v~g~~~~~gY~~~~~ 323 (458)
T PRK09029 257 TEQAEQQ-GIRCWCGYGLTEMASTVCAKRA--DGLAGVGSPLPGREVKLVD----------GEIWLRGASLALGYWRQGQ 323 (458)
T ss_pred HHHHHHc-CCcEeccccccccCcceeccCC--CCCCCCCCCCCCCEEEEeC----------CEEEEecCceeeeeecCcc
Confidence 9988765 9999999999999865543322 2234699999999999987 8999999999999999999
Q ss_pred ccchh-hcccC
Q 015313 400 ESRTL-SSCLY 409 (409)
Q Consensus 400 ~t~~~-~~g~~ 409 (409)
.+... .+|||
T Consensus 324 ~~~~~~~~~~~ 334 (458)
T PRK09029 324 LVPLVNDEGWF 334 (458)
T ss_pred ccccccCCCcc
Confidence 98765 68887
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-43 Score=346.35 Aligned_cols=366 Identities=21% Similarity=0.287 Sum_probs=284.9
Q ss_pred hHHHHHHHhcccCCCeeEEEeC--CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.|..++..+|+.++++.. .+.+||.||+++++++|++|.+. |+++||+|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~gd~V~l~~~~~~ 65 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAA-----------------GVGPGDAVAVLAGAPV 65 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCch
Confidence 5678899999999999999664 46899999999999999999994 9999999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHH-------HHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCC
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESEL-------LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE 152 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (409)
+++++++||+++|++++|+++..+.+++ .++++.++++.+++++........+. ..+.....+.....
T Consensus 66 ~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~l~~---- 140 (545)
T PRK07768 66 EIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLE-EKGIRVLTVADLLA---- 140 (545)
T ss_pred HHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhc-ccCCceeehhhhcc----
Confidence 9999999999999999999988776544 45677889999999876654433321 11111111111100
Q ss_pred ccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCC-CeEEEecCchhHHHHHHHHH
Q 015313 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA-DQFLHCLPLHHVHGLFNALL 231 (409)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-d~~l~~~pl~~~~g~~~~~~ 231 (409)
.. ........++++++++|||||||.||+|.++|+++...+.......++... |++++.+|++|..+++..++
T Consensus 141 -----~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 141 -----AD-PIDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred -----cC-CCCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 00 001223457899999999999999999999999999988887777777776 89999999999999877677
Q ss_pred HHHhcCCEEEEccCc----chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceE
Q 015313 232 APLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (409)
Q Consensus 232 ~~l~~G~~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~ 307 (409)
.++..|+++++.... ++..+++. +++++++++.+.|.++..+.+.+.... .....+++++|.
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~lr~ 280 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAEL----------ISKYRGTMTAAPNFAYALLARRLRRQA----KPGAFDLSSLRF 280 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHH----------HHHhCCEEEECchHHHHHHHHHHhccc----cccCCCchheee
Confidence 889999999988642 45555665 788999999888888777665432111 011346788999
Q ss_pred EEeeCCCCCHHHHHHHHHH---hCC---ccccccccccccccccccCCC--------------------------CCCcc
Q 015313 308 MMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEFVMAISNPLRG--------------------------ARKAG 355 (409)
Q Consensus 308 v~~gG~~~~~~~~~~~~~~---~~~---~v~~~YG~tE~g~~~~~~~~~--------------------------~~~~~ 355 (409)
++.+|+++++.+.+.+.+. ++. .+++.||+||++..+...... ....+
T Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (545)
T PRK07768 281 ALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLA 360 (545)
T ss_pred EEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEE
Confidence 9999999999999998875 555 489999999998654322111 12356
Q ss_pred ccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 356 TVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 356 ~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
++|+|+++++++|+|+++++++.+ .|||+++|+.++.|||+++...... .+|||
T Consensus 361 ~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 416 (545)
T PRK07768 361 TLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWL 416 (545)
T ss_pred eccCCCCCCEEEEECCCCCCCCCCCEEEEEEccCcccccccCCCCCcccccCCCee
Confidence 899999999999999999888877 8999999999999999977655544 57786
No 112
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=5.8e-42 Score=330.48 Aligned_cols=305 Identities=20% Similarity=0.259 Sum_probs=243.1
Q ss_pred cccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccC-CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCCh
Q 015313 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (409)
Q Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~-~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~ 104 (409)
-+.|+||.++++++|++|.+. |+ ++|++|+++++|+++++++++||+++|++++|+++.++.
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~-----------------g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~ 81 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQL-----------------ATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQ 81 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHh-----------------cCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCH
Confidence 478999999999999999995 76 579999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhccCCCCCCcEEEEecCCCCCC
Q 015313 105 SELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGK 184 (409)
Q Consensus 105 ~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 184 (409)
+++.++++++++++++++.+..... .. .. .. ......+++.++++|||||||.
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~---~~-------~~----~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 82 QEWQQVLNLVQPDQIWGLDQLKLSH-------------PP---PL-------PS----QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred HHHHHHHHhcCCCEEEecCcccccc-------------CC---CC-------Cc----cccCCCCCCcEEEEeCCCCCCC
Confidence 9999999999999999986532110 00 00 00 0011345889999999999999
Q ss_pred CceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCC
Q 015313 185 PKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 185 pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~ 264 (409)
||+|.+||+++...+......++..+ ++.++.+|++|.+|+. .++.++..|+++++.+..........
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~---------- 202 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQEL---------- 202 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhh----------
Confidence 99999999999988887777666654 4678899999999985 47889999999999874322222112
Q ss_pred CccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccccccc
Q 015313 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAI 344 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~ 344 (409)
..+++++++.++|.+++.+.+. ....++++|.+++||+++++++.+++.+ +++++++.||+||++..+
T Consensus 203 ~~~~~~t~~~~vP~~l~~l~~~-----------~~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~ 270 (452)
T PRK07445 203 PPNPSDFFLSLVPTQLQRLLQL-----------RPQWLAQFRTILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQI 270 (452)
T ss_pred hhhcCceEEEehHHHHHHHHhh-----------ChhhhhcceEEEECCccCCHHHHHHHHh-cCCeEecCcchhhhcccc
Confidence 3457899999999999998762 1124678999999999999999998876 489999999999987544
Q ss_pred cc-cCC-CCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 345 SN-PLR-GARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 345 ~~-~~~-~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
.. .+. .....+++|+|+|+++++|+ ++..|||+++||+++.|||+++.. .+|||
T Consensus 271 ~~~~~~~~~~~~~~~G~~~p~~~v~i~-------~g~~Gel~v~g~~~~~gY~~~~~~----~~g~~ 326 (452)
T PRK07445 271 ATLKPDDFLAGNNSSGQVLPHAQITIP-------ANQTGNITIQAQSLALGYYPQILD----SQGIF 326 (452)
T ss_pred cccCchhhccCCCcCCccCCCCeEEEc-------CCCcceEEEeCCccchhhcCCccC----CCCEE
Confidence 32 221 12345689999999999998 122699999999999999997642 35665
No 113
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-41 Score=354.71 Aligned_cols=357 Identities=15% Similarity=0.183 Sum_probs=270.1
Q ss_pred ChHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
+++.+.|.+.++.+||++|++++++.+||+||.++++++|+.|.+ +|+++||+|+|+++|+++
T Consensus 447 ~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~-----------------~Gv~~Gd~VaI~~~n~~e 509 (994)
T PRK07868 447 ISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIA-----------------VGVRQGDRVGVLMETRPS 509 (994)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCC----------CC
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN----------VS 150 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 150 (409)
++++++||+++|++++|+++. +++.++++.++++++|++++..+.+... ...++++..... ..
T Consensus 510 ~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~----~~~iiv~~~~~~~~~~~~~~~~~~ 582 (994)
T PRK07868 510 ALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL----PGRVLVLGGGESRDLDLPDDADVI 582 (994)
T ss_pred HHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc----CceEEEecCCccccccCCcchhhh
Confidence 999999999999999999985 6799999999999999998776654332 122222211000 00
Q ss_pred CCccccccchh----hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHH
Q 015313 151 SETTVFDQSQA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (409)
Q Consensus 151 ~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 226 (409)
........... .......++++++|+|| ||||.||++.++|.+...........+++..+|++++.+|++|..++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl 661 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGL 661 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHH
Confidence 00000000000 00111235889999998 57777777777887766555455566778899999999999999999
Q ss_pred HHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccce
Q 015313 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306 (409)
Q Consensus 227 ~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr 306 (409)
+..++..+..|+++++.+.+++..+++. ++++++|+++++|+++..+++... ....++++||
T Consensus 662 ~~~l~~~l~gG~~vvl~~~~~~~~~~~~----------I~~~~vT~~~~~Ps~l~~L~~~~~--------~~~~~~~slr 723 (994)
T PRK07868 662 LVSLGGAVVGGSRIALSRGLDPDRFVQE----------VRQYGVTVVSYTWAMLREVVDDPA--------FVLHGNHPVR 723 (994)
T ss_pred HHHHHHHhccceEEEecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcC--------CccCCCCceE
Confidence 7656677777888888888999999998 788999999999999999987411 1223567899
Q ss_pred EEEeeCCCCCHHHHHHHHHHhC-CccccccccccccccccccCCCCCCccccccccCCe-EEEEe-----------eCCC
Q 015313 307 LMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGV-QVKIA-----------EDES 373 (409)
Q Consensus 307 ~v~~gG~~~~~~~~~~~~~~~~-~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~-~~~iv-----------d~~~ 373 (409)
.++ |+.+++++.+++.+.++ +++++.||+||++.+..... ..+.+++|+|+|++ +++|. |++|
T Consensus 724 ~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~--~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G 799 (994)
T PRK07868 724 LFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANVS--GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRG 799 (994)
T ss_pred EEe--cCCCCHHHHHHHHHHhCchheeeeeecccccccccccC--CCCCcccCCccCCCCceeEEEecCcCCceeecCCc
Confidence 876 33499999999999986 79999999999876544322 24567999999997 67664 4555
Q ss_pred --CCCCCc-cceEEEeCcchhhhhcCCCcccchh-----hcccC
Q 015313 374 --GSDAAG-VGEICVKSPSLFKEYWKLPKESRTL-----SSCLY 409 (409)
Q Consensus 374 --~~~~~~-~Gel~v~g~~~~~gY~~~~~~t~~~-----~~g~~ 409 (409)
+.++.| .|||+++|+.. + +|+.+... .||||
T Consensus 800 ~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~ 838 (994)
T PRK07868 800 FVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWI 838 (994)
T ss_pred eEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEE
Confidence 445556 89999999853 3 45544321 27887
No 114
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=310.41 Aligned_cols=363 Identities=21% Similarity=0.235 Sum_probs=286.2
Q ss_pred hHHHHHHHhcccCCCeeEEEeCC--ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~--~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~ 79 (409)
++.+.|..+++++|+|+|+++.+ +++||+|+++.++++|+.|..+ |++.||.|+|.|+|++
T Consensus 78 ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~-----------------~l~~GD~VAL~men~p 140 (649)
T KOG1179|consen 78 TIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAE-----------------GLKAGDVVALLMENRP 140 (649)
T ss_pred cHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHh-----------------hcccCCEEEEecCCCh
Confidence 67899999999999999999977 6999999999999999999996 8899999999999999
Q ss_pred HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCc---eeccCCCCCCCCCccc-
Q 015313 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK---FSLIPPVPNVSSETTV- 155 (409)
Q Consensus 80 ~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~- 155 (409)
||+..+++++++|++...||++...+-+.|.+..++++.+|++++....+.++.+..... ................
T Consensus 141 efv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~ 220 (649)
T KOG1179|consen 141 EFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLL 220 (649)
T ss_pred hHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHH
Confidence 999999999999999999999999999999999999999999999988777764433222 1111111111100011
Q ss_pred ---cccch---h-hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH
Q 015313 156 ---FDQSQ---A-EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (409)
Q Consensus 156 ---~~~~~---~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 228 (409)
..... + ......+..++++.+|||||||.||+.+++|.............++++++|+++.++|++|.+|.+.
T Consensus 221 ~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~il 300 (649)
T KOG1179|consen 221 AKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGIL 300 (649)
T ss_pred HhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHH
Confidence 11111 1 1223445678999999999999999999999999888877888899999999999999999999999
Q ss_pred HHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEE
Q 015313 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (409)
Q Consensus 229 ~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v 308 (409)
++..++..|+|+++-.+|+...+|+. ..+|++|++.-.--+++.+++.... ....-+++|+.
T Consensus 301 Gi~~~l~~GaT~VlrkKFSAS~FW~D----------C~k~~~Tv~QYIGElcRYLl~~p~~--------~~er~HkVRla 362 (649)
T KOG1179|consen 301 GIGGCLLHGATVVLRKKFSASNFWDD----------CRKYNVTVIQYIGELCRYLLNQPPS--------PEERQHKVRLA 362 (649)
T ss_pred HHHHHHhcCceEEEecccchhhhHHH----------HHHhCCeeeehHHHHHHHHHcCCCC--------hhhcCceEEEE
Confidence 99999999999999999999999999 7779999999999999999987432 23345678887
Q ss_pred EeeCCCCCHHHHHHHHHHhCC-ccccccccccccccccccCCCCCCcccccc------ccCCeE-EEE--------eeCC
Q 015313 309 MCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGARKAGTVGN------PLPGVQ-VKI--------AEDE 372 (409)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~------p~~~~~-~~i--------vd~~ 372 (409)
+ |..+-+++++.|.+.||+ ++.+.||+||......+.+. +.+.+|. -+.-++ +|. .|++
T Consensus 363 ~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~---~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~ 437 (649)
T KOG1179|consen 363 Y--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDG---RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQ 437 (649)
T ss_pred e--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecC---ccccccchhhhhhhccceEEEEecCCCCceeecCC
Confidence 7 777899999999999987 58999999998876655432 2333332 111222 333 3333
Q ss_pred CC--CCCCc-cceEEEe----Cc-chhhhhcCCCcccchh
Q 015313 373 SG--SDAAG-VGEICVK----SP-SLFKEYWKLPKESRTL 404 (409)
Q Consensus 373 ~~--~~~~~-~Gel~v~----g~-~~~~gY~~~~~~t~~~ 404 (409)
|- ++++| .|.+.-+ .| .-|.||.+++++|++.
T Consensus 438 G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kK 477 (649)
T KOG1179|consen 438 GLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKK 477 (649)
T ss_pred ceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhh
Confidence 31 23444 6655333 44 4499999999988876
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=9.3e-41 Score=322.12 Aligned_cols=320 Identities=27% Similarity=0.382 Sum_probs=258.4
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHH
Q 015313 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (409)
Q Consensus 28 Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~ 107 (409)
||+||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|++++|+++..+.+++
T Consensus 1 Ty~~l~~~~~~~a~~l~~~-----------------g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~ 63 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQ-----------------GIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENER 63 (436)
T ss_pred CHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHH
Confidence 8999999999999999994 99999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhccCCCCCCcEEEEecCCCCCCCce
Q 015313 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (409)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 187 (409)
..++++.+++++++++...... .. ...+....... . ...........+++++++|||||||.||+
T Consensus 64 ~~~~~~~~~~~~i~~~~~~~~~---~~-----~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 64 TNQLEDLDVQLLLTDSLLEEKD---FQ-----ADSLDRIEAAG------R-YETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred HHHHHhcCCCEEEEcCcccccc---ee-----ecchHhhhhcc------c-ccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 9999999999999987632100 00 00000000000 0 00001122356789999999999999999
Q ss_pred eeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCcc
Q 015313 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAG 267 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (409)
|.++|+++...+......++.+++|++++.+|++|..++. .++.++..|+++++.+.++ .+++. +++
T Consensus 129 v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~~--~~~~~----------l~~ 195 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKFN--QLLEM----------IAN 195 (436)
T ss_pred EEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchHH--HHHHH----------HHH
Confidence 9999999999998888888999999999999999999885 5889999999999988764 66666 788
Q ss_pred ccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCcccccccccccccccccc
Q 015313 268 EAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP 347 (409)
Q Consensus 268 ~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~ 347 (409)
+++|++.++|.++..+++... . .+++|.+++||+++++++.+.+.+ +++++++.||+||++......
T Consensus 196 ~~~t~~~~~P~~l~~l~~~~~-----------~-~~~l~~~~~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 262 (436)
T TIGR01923 196 ERVTHISLVPTQLNRLLDEGG-----------H-NENLRKILLGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTA 262 (436)
T ss_pred hCCeEEEeHHHHHHHHHhCcC-----------C-CCceEEEEECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCc
Confidence 999999999999999887521 1 167999999999999999988876 499999999999998655432
Q ss_pred CC-CCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCcccchh-hcccC
Q 015313 348 LR-GARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKESRTL-SSCLY 409 (409)
Q Consensus 348 ~~-~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~ 409 (409)
.. ......++|.|+++++++|.+++.. +.|||+++|+.++.|||++++.+... .+|||
T Consensus 263 ~~~~~~~~~~~G~~~~~~~~~i~~~~~~----~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 322 (436)
T TIGR01923 263 TPEMLHARPDVGRPLAGREIKIKVDNKE----GHGEIMVKGANLMKGYLYQGELTPAFEQQGWF 322 (436)
T ss_pred CccccccccCCCccCCCcEEEEEeCCCC----CceEEEEECCccchhhCCChhhhhhhhcCCCe
Confidence 21 1122224899999999999443321 56999999999999999999888776 57887
No 116
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.5e-41 Score=329.89 Aligned_cols=315 Identities=18% Similarity=0.167 Sum_probs=235.2
Q ss_pred eCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH------HHHHHHHhhccCCceeccCCCCC
Q 015313 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY------REVLQNVASKSGAKFSLIPPVPN 148 (409)
Q Consensus 75 ~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 148 (409)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+..+........+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 12222221111111111110000
Q ss_pred ---------CCCCcccc---ccc-----hhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCC
Q 015313 149 ---------VSSETTVF---DQS-----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (409)
Q Consensus 149 ---------~~~~~~~~---~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 211 (409)
........ ... .........++++++|+|||||||.||||.+||++++.........++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 00000000 000 0000111245899999999999999999999999988766655666778889
Q ss_pred CeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 212 d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
|++++.+|++|..++. .++.++..|+++++.+. +++..+++. ++++++|++.++|+++..|++....
T Consensus 161 d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~----------i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 161 DVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKF----------VQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred CEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHH----------HHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 9999999999999975 58889999999999874 677888888 7889999999999999998764210
Q ss_pred hHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHh--CCcccccccccccccccc-ccCCCCCCccccccccCCeEEE
Q 015313 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVK 367 (409)
Q Consensus 291 ~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~--~~~v~~~YG~tE~g~~~~-~~~~~~~~~~~~G~p~~~~~~~ 367 (409)
.....++++||.+++||+++++++.+++++.+ ++++++.||+||++.... .........+++|+|.++++++
T Consensus 229 -----~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 303 (499)
T PLN03051 229 -----AMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFV 303 (499)
T ss_pred -----ccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEE
Confidence 01234678999999999999999998777743 478999999999864332 2222234567899999999999
Q ss_pred EeeCCCCCCCCc---cceEEEeCcch--hhhhcCCCcccchhhcc
Q 015313 368 IAEDESGSDAAG---VGEICVKSPSL--FKEYWKLPKESRTLSSC 407 (409)
Q Consensus 368 ivd~~~~~~~~~---~Gel~v~g~~~--~~gY~~~~~~t~~~~~g 407 (409)
|+|++|++++.| +|||+++||.+ +.||||++ .++..++|
T Consensus 304 ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g 347 (499)
T PLN03051 304 LLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HDKVYYKG 347 (499)
T ss_pred EECCCCCCCCCCCCcceEEEEecCcCCCCccccCCc-ccceeeec
Confidence 999999988776 59999999976 58999875 35444667
No 117
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=6.8e-40 Score=342.62 Aligned_cols=356 Identities=13% Similarity=0.108 Sum_probs=262.5
Q ss_pred hHHHHHHHhcccCCCeeEEEeC---C--ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 2 EVFKAAYKKGSMARDSVAIRAD---Q--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~---~--~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
++.+.|.+.++++|+++|+... + +++||+|+.++++++|++|.+ +|+++||+|+|+++
T Consensus 428 Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-----------------lGV~~GDrVaIls~ 490 (1452)
T PTZ00297 428 SLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-----------------LGVRPGDVIGVDCE 490 (1452)
T ss_pred CHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 6788999999999999999731 2 679999999999999999999 59999999999999
Q ss_pred CCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCce-eccCCCCCCC-----
Q 015313 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF-SLIPPVPNVS----- 150 (409)
Q Consensus 77 ~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----- 150 (409)
|+++|+++++||+++|++++|+++ +.+++.++++.++++++|++.+....+...... .... +.+.......
T Consensus 491 N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~-~Lr~IIv~d~~~~~~~~~~~ 567 (1452)
T PTZ00297 491 ASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSR-KLETVVYTHSFYDEDDHAVA 567 (1452)
T ss_pred CCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhccc-CCcEEEEECCCccccccccc
Confidence 999999999999999999999975 467899999999999999998877766654332 2222 2222100000
Q ss_pred --------CCccccccc---hhhhccCCCCCCcEEEEe---cCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCe
Q 015313 151 --------SETTVFDQS---QAEKMDGQRGEDPALIVY---TSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQ 213 (409)
Q Consensus 151 --------~~~~~~~~~---~~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~ 213 (409)
......... .........++|++.|+| ||||||.||||++||+|++..+....... ...++|+
T Consensus 568 ~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~ 647 (1452)
T PTZ00297 568 RDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHL 647 (1452)
T ss_pred ccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCE
Confidence 000000000 001112336788999986 99999999999999999999888765432 3467899
Q ss_pred EEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHH
Q 015313 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE 293 (409)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~ 293 (409)
+++.+|++|+++... .+.++..|+++.+ +++..+++. +++++||+++++|.+++.+.+.+......
T Consensus 648 ~Ls~LPLaHI~er~~-~~~~l~~G~~I~~---~d~~~lled----------L~~~rPTv~~~VPrv~ekI~~~i~~~~~~ 713 (1452)
T PTZ00297 648 MVHFTPFAMLFNRVF-VLGLFAHGSAVAT---VDAAHLQRA----------FVKFQPTILVAAPSLFSTSRLQLSRANER 713 (1452)
T ss_pred EEEechHHHHHHHHH-HHHHHHcCCEEEe---CCHHHHHHH----------HHHHCCEEEEecHHHHHHHHHHHHHHhhh
Confidence 999999999999754 6777999999975 357778887 78899999999999999987765322111
Q ss_pred ----------------------------------HHHHhhhhhccceEEEeeCC--CCCHHHHHHHHHHhCCcccccccc
Q 015313 294 ----------------------------------LQAASASAAKQLRLMMCGSS--ALPLPVMQQWETITGHRLLERYGM 337 (409)
Q Consensus 294 ----------------------------------~~~~~~~~~~~lr~v~~gG~--~~~~~~~~~~~~~~~~~v~~~YG~ 337 (409)
....+.....++|.+++||+ +++..+. .++++..+||+
T Consensus 714 ~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~------~~i~i~~g~gl 787 (1452)
T PTZ00297 714 YSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL------EHISVCYVPCL 787 (1452)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh------CCceEEEecce
Confidence 00112223468999999974 4443332 26788899999
Q ss_pred ccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCcccchhhcccC
Q 015313 338 TEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKESRTLSSCLY 409 (409)
Q Consensus 338 tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~ 409 (409)
||+. ..+.+.. . ...|.|+|++++||.|.+.....+..|||+++ |++||++|++..+||+
T Consensus 788 TE~~--~~~~~~~-~--~~~G~PlpgvEvKI~~~~E~~~~~~~GEIlvr-------~~kdpe~T~e~~~gW~ 847 (1452)
T PTZ00297 788 REVF--FLPSEGV-F--CVDGTPAPSLQVDLEPFDEPSDGAGIGQLVLA-------KKGEPRRTLPIAAQWK 847 (1452)
T ss_pred EEee--eecCCCC-c--ccCCeecCceEEEEcccccccCCCCCCeEEEE-------ECCChHHHHHhhCcCc
Confidence 9953 2232222 2 23499999999999974321112336999996 4699999999889996
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-39 Score=306.90 Aligned_cols=289 Identities=21% Similarity=0.275 Sum_probs=247.8
Q ss_pred EEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeC
Q 015313 19 AIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL 98 (409)
Q Consensus 19 a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i 98 (409)
+++++++++||.||.++++++|+.|.. ++++|++|+++++|+++++++++|++++|++++|+
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~~------------------~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l 62 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQF------------------QEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPI 62 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHHc------------------CCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEec
Confidence 467888999999999999999999853 88999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchhhhccCCCCCCcEEEEec
Q 015313 99 ALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYT 178 (409)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 178 (409)
++..+.+++..++++++++++++++.... .. . .....++++++++||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~---~---------------~~~~~~~~~~~i~~T 109 (414)
T PRK08308 63 HPDTPKEAAIRMAKRAGCHGLLYGESDFT---------------KL---E---------------AVNYLAEEPSLLQYS 109 (414)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEecCcccc---------------cc---c---------------CCCCCCCCceEEEEC
Confidence 99999999999999999999999763110 00 0 012345789999999
Q ss_pred CCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhh
Q 015313 179 SGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRES 258 (409)
Q Consensus 179 SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~ 258 (409)
|||||.||+|.++|+++...+......+....+|+.+..+|++|.++++..++.++..|+++++.+.+++..+++.
T Consensus 110 SGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~---- 185 (414)
T PRK08308 110 SGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNI---- 185 (414)
T ss_pred CCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHH----
Confidence 9999999999999999999888888888888899999999999999988889999999999999999899988888
Q ss_pred cCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHhCCccccccccc
Q 015313 259 YPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMT 338 (409)
Q Consensus 259 ~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~t 338 (409)
++++++|.++++|.++..+.+.... ..+++.++.||+++++++.+++++. +.++++.||+|
T Consensus 186 ------l~~~~~t~~~~~P~~~~~l~~~~~~------------~~~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~t 246 (414)
T PRK08308 186 ------LRNTPQHILYAVPLMLHILGRLLPG------------TFQFHAVMTSGTPLPEAWFYKLRER-TTYMMQQYGCS 246 (414)
T ss_pred ------HHHhCCeEEEcCHHHHHHHHhcCCc------------cccccEEEEccCCCCHHHHHHHHHh-CChhhhccCcc
Confidence 7779999999999999998764211 1368899999999999999999887 67899999999
Q ss_pred cccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCc
Q 015313 339 EFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSP 388 (409)
Q Consensus 339 E~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~ 388 (409)
|++++..... ....+++|+|+|++++++.++++ +.|||++++.
T Consensus 247 E~~~~~~~~~--~~~~~~~G~p~~~~~~~~~~~~~-----~~gel~v~~~ 289 (414)
T PRK08308 247 EAGCVSICPD--MKSHLDLGNPLPHVSVSAGSDEN-----APEEIVVKMG 289 (414)
T ss_pred ccCCeeecCC--CCCCCccCccCCCeEEEEecCCC-----CCceEEEEcC
Confidence 9986554322 23457899999999999986432 3599999865
No 119
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=308.71 Aligned_cols=358 Identities=24% Similarity=0.335 Sum_probs=286.5
Q ss_pred CCCeeEEEeC------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHH
Q 015313 14 ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLG 87 (409)
Q Consensus 14 ~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A 87 (409)
.+|++|+++. ...+||.|+.+++.++|+.|.. +|+++||+|++++|+.++++++++|
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-----------------~g~~kGD~V~~~mPm~~e~~ia~lA 140 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-----------------CGLKKGDTVAIYMPMIPEAVIAMLA 140 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-----------------cCCCCCcEEEEeccCChHHHHHHHH
Confidence 4888888873 3458999999999999999996 6999999999999999999999999
Q ss_pred HHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHH---------HHHHhhccCCc------eeccCCCCCCCCC
Q 015313 88 TWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV---------LQNVASKSGAK------FSLIPPVPNVSSE 152 (409)
Q Consensus 88 ~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~~~~------~~~~~~~~~~~~~ 152 (409)
|.++|++.+++-..++++++...++.++++++++.....+. +.+........ ............+
T Consensus 141 ~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 220 (626)
T KOG1175|consen 141 CARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFW 220 (626)
T ss_pred HhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccH
Confidence 99999999999999999999999999999999998743322 11111111100 0000000000011
Q ss_pred ccc-cccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHH-HHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 015313 153 TTV-FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID-AQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (409)
Q Consensus 153 ~~~-~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~-~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~ 230 (409)
... ........+...+.+|+.+|+|||||||.||++.+++.... ..+.....++..++.|++.+.....++.+.++..
T Consensus 221 ~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~ 300 (626)
T KOG1175|consen 221 SLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVL 300 (626)
T ss_pred HHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhh
Confidence 111 11112222555678999999999999999999998887544 5566666778999999999999999999999988
Q ss_pred HHHHhcCCEEEEccC--cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEE
Q 015313 231 LAPLYAGATVEFMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (409)
Q Consensus 231 ~~~l~~G~~i~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v 308 (409)
+.+|++|+|+++.+. +++..+++. +.+|++|.+++.|+.++.+.+.... ......+++||.+
T Consensus 301 ~gpl~~Ga~~vl~~g~p~~~~~~~~~----------v~k~~it~l~t~pt~~r~l~~~~~~------~~~~~~~~sLk~~ 364 (626)
T KOG1175|consen 301 YGPLLNGATVVLYEGPPFDPGRIWKI----------LDKYKVTVLYTAPTAYRLLRRLGQE------DVTSYSLKSLRTC 364 (626)
T ss_pred hhhhhcCcEEEEEcCCCCChhhhhhh----------HhhcceEEEEeccHHHHHHHHhccc------cccccccceEEEE
Confidence 899999999999985 467888887 8899999999999999988775332 2233344789999
Q ss_pred EeeCCCCCHHHHHHHHHHhCC-ccccccccccccccccccCCC--CCCccccccccCCeEEEEeeCCCCCCCC--ccceE
Q 015313 309 MCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAA--GVGEI 383 (409)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~~~~~~--~~~~~~~G~p~~~~~~~ivd~~~~~~~~--~~Gel 383 (409)
.++|+++.++..+.+.+.++. +|++.||+||+|+.+..+... +-++++.+.|.+|+.+.|.|++|+.+++ +.|+|
T Consensus 365 ~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l 444 (626)
T KOG1175|consen 365 GSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPSTGNGEL 444 (626)
T ss_pred eecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCCceeEE
Confidence 999999999999999999977 699999999999877755443 4889999999999999999999999877 58999
Q ss_pred EEeC--c-chhhhhcCCCcccchh
Q 015313 384 CVKS--P-SLFKEYWKLPKESRTL 404 (409)
Q Consensus 384 ~v~g--~-~~~~gY~~~~~~t~~~ 404 (409)
+++. | +.+++||+|++..+++
T Consensus 445 ~~~~~~P~~~~r~~~~n~erf~~~ 468 (626)
T KOG1175|consen 445 RLKPPWPPGMFRTLWGNHERFRAA 468 (626)
T ss_pred EEeCCCCccccccccCCHHHhhhh
Confidence 9997 3 7899999999966555
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4e-33 Score=281.66 Aligned_cols=358 Identities=23% Similarity=0.334 Sum_probs=286.4
Q ss_pred hHHHHHHHhcccCCCeeEEEeCCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH
Q 015313 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~ 81 (409)
++.+.|...+...|++.|+.+.+.++||+++..+++++|+.|.+. |+.+++.|+++.+.++++
T Consensus 228 ~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~-----------------g~~~~~~V~i~~~rs~~~ 290 (642)
T COG1020 228 TIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISL-----------------GVGPGETVAILADRSLEL 290 (642)
T ss_pred hHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCeEEEEcCCCHHH
Confidence 578899999999999999999999999999999999999999994 889999999999889999
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCCCCCCCCCccccccchh
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (409)
++.++|++++|+.++|+++.++.+.+..+++.++++.+++........... .. ..... .... . . ...
T Consensus 291 i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~--~~~~---~-~-~~~ 357 (642)
T COG1020 291 VVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL----PG--LALDD--ALSE---I-P-DTD 357 (642)
T ss_pred HHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC----Cc--ccccc--cccc---C-C-ccC
Confidence 999999999999999999999999999999999999999984322110000 00 00000 0000 0 0 000
Q ss_pred hhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEE
Q 015313 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (409)
Q Consensus 162 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~ 241 (409)
.......+++.++++|||||||.||||..+|+++.+.+.+....+..+..|+++...++++.... ..++.++..|++++
T Consensus 358 ~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~ 436 (642)
T COG1020 358 PIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASV-FEIFGALLEGARLV 436 (642)
T ss_pred cccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEE
Confidence 00123345899999999999999999999999999988888888899999999999999766665 46999999999999
Q ss_pred EccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHH
Q 015313 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (409)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~ 318 (409)
+.+. .++..+.+. +.++++|.+..+|.++..+...... .......+.+|.+.+||+.++.+
T Consensus 437 ~~~~~~~~~~~~l~~~----------~~~~~vt~~~~~p~~~~~~~~~~~~------~~~~~~~~~lr~~~~gGe~l~~~ 500 (642)
T COG1020 437 LAPALLQVDPAALLEL----------LEAQGITVLLLVPLLLRLLLLAALA------PDLISPCERLRQLLSGGEALPLA 500 (642)
T ss_pred ecCccccCCHHHHHHH----------HHHcCCEEEEecHHHHHHHHhchhh------ccccCCcccccEEEEcCCCCCHH
Confidence 9985 456666666 6779999999999999988874110 01112233599999999999999
Q ss_pred HHHHHHHHh--CCccccccccccccccccccCCCCCC--ccccccccCCeEEEEeeCCCCCCCCc-cceEEEeCcchhhh
Q 015313 319 VMQQWETIT--GHRLLERYGMTEFVMAISNPLRGARK--AGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKE 393 (409)
Q Consensus 319 ~~~~~~~~~--~~~v~~~YG~tE~g~~~~~~~~~~~~--~~~~G~p~~~~~~~ivd~~~~~~~~~-~Gel~v~g~~~~~g 393 (409)
+..++.... ...+.+.||.||+............. ...+|.|+++..++|.|..++.++.+ .||+++.|.+++.|
T Consensus 501 ~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~gel~i~g~~~a~g 580 (642)
T COG1020 501 LVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVPGELYIAGLGLALG 580 (642)
T ss_pred HHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCCeeeEECCcchhhh
Confidence 999988876 46899999999966544322111111 45899999999999999888999999 79999999999999
Q ss_pred hcCCCcccchhhc
Q 015313 394 YWKLPKESRTLSS 406 (409)
Q Consensus 394 Y~~~~~~t~~~~~ 406 (409)
|+++|+.|.+.|-
T Consensus 581 y~~~p~lt~~~f~ 593 (642)
T COG1020 581 YLNRPDLTAERFI 593 (642)
T ss_pred hcCChhhhHHHhh
Confidence 9999999998853
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=2.1e-26 Score=216.25 Aligned_cols=201 Identities=26% Similarity=0.390 Sum_probs=163.2
Q ss_pred CCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEE---
Q 015313 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF--- 242 (409)
Q Consensus 166 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~--- 242 (409)
...++++++++|||||||.||+|.++|+++...+......+ ...++++..+|++|..++.. ++.++..|++.++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQV-LVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHH-HHHHHHcCCeEEecCc
Confidence 44568999999999999999999999999998877665543 35578999999999999854 7788999999887
Q ss_pred ccCcchHHHHHHHHhhcCCCCCCcccc--ceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHH
Q 015313 243 MPKFSVRGIWQRWRESYPVNGNRAGEA--ITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (409)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~ 320 (409)
...+++..+++. +++++ .++...+|.++..++.... ...+++++|.+++||+++++++.
T Consensus 108 ~~~~~~~~~~~~----------i~~~~~~~~~~~~~p~~l~~~~~~~~---------~~~~~~~l~~i~~gG~~l~~~~~ 168 (358)
T PRK07824 108 SAGFDPTALPRA----------VAELGGGRRYTSLVPMQLAKALDDPA---------ATAALAELDAVLVGGGPAPAPVL 168 (358)
T ss_pred CCCcCHHHHHHH----------HHHhCCCceEEEecHHHHHHHHhCcc---------ccCCcccceEEEECCCCCCHHHH
Confidence 345788888887 55565 5667778888776655311 22357899999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCCCCccceEEEeCcchhhhhcCCCcc
Q 015313 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKE 400 (409)
Q Consensus 321 ~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~ 400 (409)
+++.+ +++++++.||+||++..+. ..|.|+++++++|.| |||+++|+.++.||+|+++.
T Consensus 169 ~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v~i~~----------Gei~v~g~~~~~gY~~~~~~ 227 (358)
T PRK07824 169 DAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVRVRVED----------GRIALGGPTLAKGYRNPVDP 227 (358)
T ss_pred HHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCEEEecC----------CEEEEecCccccccCCCccc
Confidence 98876 4999999999999875432 358999999999954 99999999999999999987
Q ss_pred cchhhcccC
Q 015313 401 SRTLSSCLY 409 (409)
Q Consensus 401 t~~~~~g~~ 409 (409)
+.-..+|||
T Consensus 228 ~~~~~~g~~ 236 (358)
T PRK07824 228 DPFAEPGWF 236 (358)
T ss_pred ccccCCCce
Confidence 654478887
No 122
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=3.3e-26 Score=198.89 Aligned_cols=207 Identities=18% Similarity=0.168 Sum_probs=156.5
Q ss_pred HHHhcccCCCeeEEEe--C----CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH
Q 015313 7 AYKKGSMARDSVAIRA--D----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (409)
Q Consensus 7 l~~~~~~~~~~~a~~~--~----~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~ 80 (409)
|...++++|+++|+++ + ++++||+||.++++++|+.|++. .|+++||+|+|+++|+++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~Gv~~GdrV~i~~~n~~~ 65 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDE----------------LDAEPGSRVALDLPAHWQ 65 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHH
Confidence 4667788999999974 2 23699999999999999999972 389999999999999999
Q ss_pred HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceecc-----CCC---CCCCCC
Q 015313 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI-----PPV---PNVSSE 152 (409)
Q Consensus 81 ~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~ 152 (409)
++++++|++++|++++|++ .++++++|++++..+.+... .....+ ... ......
T Consensus 66 ~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T TIGR03089 66 TAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAAGS-----GEVVALSLDPLGRRVAGELPPGV 127 (227)
T ss_pred HHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhcccC-----CceEEEeccccccCCCCCCCCcc
Confidence 9999999999999999995 68899999998877664311 111111 000 000000
Q ss_pred ccccccch----hhhcc-CCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHH
Q 015313 153 TTVFDQSQ----AEKMD-GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (409)
Q Consensus 153 ~~~~~~~~----~~~~~-~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 227 (409)
........ ..... ...++|++.++||||+ +|++++... ...+++++|+++ .+|++|..|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~ 193 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFL 193 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHH
Confidence 11111111 01111 3356899999999985 566655544 455788999999 99999999998
Q ss_pred HHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCCccccce
Q 015313 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAIT 271 (409)
Q Consensus 228 ~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt 271 (409)
..++.++..|+++++++.|++..+++. ++++|||
T Consensus 194 ~~~~~~l~~G~t~v~~~rFd~~~~l~~----------i~~~~vT 227 (227)
T TIGR03089 194 ATLLAPLAAGGSLVLVTHPDPARLDQI----------AETERVT 227 (227)
T ss_pred HHHHHHhccCceEEEecCCCHHHHHHH----------HHhhcCC
Confidence 889999999999999999999999999 7778886
No 123
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.92 E-value=5e-23 Score=200.67 Aligned_cols=368 Identities=15% Similarity=0.221 Sum_probs=262.4
Q ss_pred hHHHHHHHhcccCCCeeEEEe------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEe
Q 015313 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (409)
Q Consensus 2 ~~~~~l~~~~~~~~~~~a~~~------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~ 75 (409)
++.+.|+++++.+||.+|+.. ..+++||.+|+.++.+++..|.++ .-+++||+|+|++
T Consensus 771 ~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k----------------~~lk~Gd~V~Lmy 834 (1363)
T KOG3628|consen 771 TILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDK----------------GHLKAGDHVVLMY 834 (1363)
T ss_pred HHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhc----------------ccCCCCCeEEEEc
Confidence 688999999999999999987 347999999999999999999987 4889999999999
Q ss_pred CCCHHHHHHHHHHHhhCcEEEeCCCCCCh------HHHHHHHhcCCceEEEechhHHHHHHHHhhccCCceeccCC---C
Q 015313 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPE------SELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP---V 146 (409)
Q Consensus 76 ~~~~~~~~~~~A~~~~G~~~~~i~~~~~~------~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~ 146 (409)
++++|++++++||+++|++++|++|.... ..+..+++.+++..|+++.+....++.-..........++- .
T Consensus 835 ~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~ 914 (1363)
T KOG3628|consen 835 PPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVL 914 (1363)
T ss_pred CChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcc
Confidence 99999999999999999999999875433 35778899999999999998776655422111111111221 1
Q ss_pred CCCCCC-cc----ccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCch
Q 015313 147 PNVSSE-TT----VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (409)
Q Consensus 147 ~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (409)
++.... .. ........++-...++.+|++-+.--++|.--++.++|+++++.....-+...+.+..-++...+.+
T Consensus 915 ~~~~~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 915 PKLPETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred cccchhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 111110 00 0001111122233567899999999999999999999999999999999888888877777777777
Q ss_pred hHHHHHHHHHHHHhcCCEEEEccCc----chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHH
Q 015313 222 HVHGLFNALLAPLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (409)
Q Consensus 222 ~~~g~~~~~~~~l~~G~~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~ 297 (409)
...|+...-+...++|.+.+++++. ++.-++.. +++|++.-++.+=..++.+.+.++........
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~----------i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~- 1063 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQI----------ISQYKVKDTYPTYSTLNLCQKGLETSVENLSK- 1063 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHH----------HhcccccccchhHHHHHHHHhccccccchhhh-
Confidence 7777766666778999988888764 45555555 88899999999988888887766543333322
Q ss_pred hhhhhccceEEEeeCCCCCHHHHHHHHHHh---CC---ccccccccccccccccccCCC----------------C----
Q 015313 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNPLRG----------------A---- 351 (409)
Q Consensus 298 ~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~---~~---~v~~~YG~tE~g~~~~~~~~~----------------~---- 351 (409)
...+.+. ..++..-+.-...+...|.+.| |. .+.-.|++.---.++.....+ .
T Consensus 1064 ~gnn~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~v 1142 (1363)
T KOG3628|consen 1064 RGNNTSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLV 1142 (1363)
T ss_pred hhccccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeee
Confidence 2333443 4444445555556777777766 22 344455554433333321100 0
Q ss_pred --CCcc-----ccccccCCeEEEEeeCCCC-CCCCc-cceEEEeCcchhhhhcCC
Q 015313 352 --RKAG-----TVGNPLPGVQVKIAEDESG-SDAAG-VGEICVKSPSLFKEYWKL 397 (409)
Q Consensus 352 --~~~~-----~~G~p~~~~~~~ivd~~~~-~~~~~-~Gel~v~g~~~~~gY~~~ 397 (409)
..+. ..|...+++++.|++++++ ++.+| .||||++|.+-+.+|++.
T Consensus 1143 e~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~ 1197 (1363)
T KOG3628|consen 1143 EVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTI 1197 (1363)
T ss_pred ecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEecccccccccccc
Confidence 0011 2378889999999999985 46666 899999999999888875
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.88 E-value=8.3e-22 Score=188.93 Aligned_cols=200 Identities=19% Similarity=0.158 Sum_probs=150.9
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHH---HhhcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML---TEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
..++++.+++||||||.||++.++|.++....... ....+...+|++++..++.+..+.+...+..+..|++++.++
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 34578889999999999999999999987654333 234577888999887766544443333566788899999888
Q ss_pred CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHH
Q 015313 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (409)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~ 324 (409)
..+++.+++. ++++++|+++++|+++..|++..+... ......++|.+++||+++++++.+.++
T Consensus 153 ~~~~~~~~~~----------i~~~~~t~l~~~Ps~l~~L~~~~~~~~------~~~~~~~lr~i~~~ge~l~~~~~~~i~ 216 (422)
T TIGR02155 153 GGQTEKQVQL----------IQDFKPDIIMVTPSYMLNLLEELKRMG------IDPAQTSLQVGIFGAEPWTNAMRKEIE 216 (422)
T ss_pred CCCHHHHHHH----------HHHHCCCEEEEcHHHHHHHHHHHHHcC------CCcccCceEEEEEeCCcCCHHHHHHHH
Confidence 7778888887 788999999999999999987533211 001235899999999999999999999
Q ss_pred HHhCCccccccccccccc--cccccCCCCCCcccccccc--CCeEEEEeeC-CCCCCCCc-cceEEEeCc
Q 015313 325 TITGHRLLERYGMTEFVM--AISNPLRGARKAGTVGNPL--PGVQVKIAED-ESGSDAAG-VGEICVKSP 388 (409)
Q Consensus 325 ~~~~~~v~~~YG~tE~g~--~~~~~~~~~~~~~~~G~p~--~~~~~~ivd~-~~~~~~~~-~Gel~v~g~ 388 (409)
+.||+++++.||+||+++ +...+.. . ..|.++ +++.++|+|+ +++++++| .|||++++.
T Consensus 217 ~~~g~~v~~~YG~tE~~~~~~~~~~~~--~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~ 281 (422)
T TIGR02155 217 ARLGMKATDIYGLSEVIGPGVAMECVE--T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL 281 (422)
T ss_pred HHhCCceEecccchhhcCCceeecccc--c---CCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC
Confidence 999999999999999853 2222111 1 123333 3577899994 67888888 899999985
No 125
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.87 E-value=4.2e-21 Score=180.08 Aligned_cols=168 Identities=20% Similarity=0.252 Sum_probs=136.4
Q ss_pred CCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCC--CCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcc
Q 015313 170 EDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS--ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS 247 (409)
Q Consensus 170 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~ 247 (409)
+..++++|||||||.||+|.++|+++...+......++... .|++++.+|++|..|+...++.++..|+++++.+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 56889999999999999999999999998888777776643 4689999999999998777888999999999999888
Q ss_pred hHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHHHHh
Q 015313 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT 327 (409)
Q Consensus 248 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~ 327 (409)
+..+++. ++. .|+++++|.+++.+.+.. .++++++. ++||+++++++.+.+.+.
T Consensus 175 ~~~~l~~----------i~~--~t~~~~~P~~l~~l~~~~------------~~l~slr~-i~gGa~l~~~l~~~~~~~- 228 (386)
T TIGR02372 175 ASGIMRH----------ARP--GDLIVGTPFIWEQLADLD------------YRLPGVVG-VSSGAPSTAATWRCLLAA- 228 (386)
T ss_pred hHHHHHh----------hcc--CCEEEECcHHHHHHHhhC------------cCCCccee-EecCCCCCHHHHHHHHHh-
Confidence 8887776 443 389999999999987631 23566776 678999999999999886
Q ss_pred CC-ccccccccccccccccccCCCCCCccccccccCCeEEEE
Q 015313 328 GH-RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKI 368 (409)
Q Consensus 328 ~~-~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~i 368 (409)
+. .+++.||+||++++.... .++..|.|+|++++++
T Consensus 229 g~~~v~~~YG~TEt~~i~~~~-----~~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 229 GLARLLEVYGATETGGIGLRE-----APDDPFRLLPDLACFA 265 (386)
T ss_pred cccchhheecccccccccccc-----CCCCCcccCCCccccC
Confidence 64 799999999998655432 1234578888887765
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.84 E-value=6.7e-20 Score=176.07 Aligned_cols=196 Identities=19% Similarity=0.167 Sum_probs=146.5
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
..+++..+.+||||||.||+|.+||.++.......... .++.++|+++...++.+..+.....++++..|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 34678899999999999999999999988766554433 378889999999998876665443566678888876544
Q ss_pred CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHH
Q 015313 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (409)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~ 324 (409)
. ....++. ++++++|.+.++|+.+..+++.++.... ....+++|.+++||+++++++.+.+.
T Consensus 164 ~--~~~~~~~----------i~~~~~t~l~~~ps~ll~La~~~~~~g~------~~~~~~lr~ii~gGE~l~~~~r~~ie 225 (445)
T TIGR03335 164 K--CTFPIRI----------IESYRPTGIVASVFKLLRLARRMKAEGI------DPAESSIRRLVVGGESFADESRNYVE 225 (445)
T ss_pred c--hhHHHHH----------HHHhCCCEEEECHHHHHHHHHHHHHcCC------CcccCcceEEEEcCCCCCHHHHHHHH
Confidence 3 2344555 6779999999999998888765332110 11236899999999999999999999
Q ss_pred HHhCCccccccccccccccccccCCCCCCcccccccc--CCeEEEEeeCCCC-CCCCc-cceEEEeCc
Q 015313 325 TITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPL--PGVQVKIAEDESG-SDAAG-VGEICVKSP 388 (409)
Q Consensus 325 ~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~--~~~~~~ivd~~~~-~~~~~-~Gel~v~g~ 388 (409)
+.+|+++++.||+||++.. ..+.. ..|..+ +.+.++|+|+++. ++++| .|||++++-
T Consensus 226 ~~~g~~v~~~YG~TE~~~~-~~c~~------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L 286 (445)
T TIGR03335 226 ELWGCEVYNTYGSTEGTMC-GECQA------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTL 286 (445)
T ss_pred HHhCCcEEecCChhhhhhe-EEecC------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEec
Confidence 9999999999999998632 22211 123333 4578999998875 47777 899999964
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.67 E-value=2.7e-15 Score=138.02 Aligned_cols=199 Identities=19% Similarity=0.140 Sum_probs=149.5
Q ss_pred CCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc
Q 015313 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (409)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~ 243 (409)
...+++..|.-||||||+|+.+.+++..+..+...+...+ +...+|++....-..-..|-...-+++--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 3446677799999999999999999999988777776554 6677887776655332221112234445578888777
Q ss_pred cCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHH
Q 015313 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQW 323 (409)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~ 323 (409)
.+-+.+.-.+. ++.+++|.+.++|+.+..+++.+++.+ ....-.++|.+++|+|++++++.+.+
T Consensus 167 ~~g~~~~~~~l----------~~df~~tvI~~tps~~l~lae~~~~~G------~~~~~~~lk~~i~gaE~~see~R~~i 230 (438)
T COG1541 167 SGGNTERQLEL----------MKDFKPTVIAATPSYLLYLAEEAEEEG------IDPDKLSLKKGIFGAEPWSEEMRKVI 230 (438)
T ss_pred CCccHHHHHHH----------HHhcCCcEEEEChHHHHHHHHHHHHcC------CChhhcceeEEEEecccCCHHHHHHH
Confidence 66566666676 777999999999999999999866542 12345689999999999999999999
Q ss_pred HHHhCCccccccccccccccc-cccCCCCCCcccccc--ccCCeEEEEeeCC-CCCCCCc-cceEEEeC
Q 015313 324 ETITGHRLLERYGMTEFVMAI-SNPLRGARKAGTVGN--PLPGVQVKIAEDE-SGSDAAG-VGEICVKS 387 (409)
Q Consensus 324 ~~~~~~~v~~~YG~tE~g~~~-~~~~~~~~~~~~~G~--p~~~~~~~ivd~~-~~~~~~~-~Gel~v~g 387 (409)
.+.||+..++.||.||..++. ..+.+.. |- .-+...+.|+|++ |+.+++| .|||.++.
T Consensus 231 e~~~g~~~~diYGltE~~g~g~~eC~~~~------glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~ 293 (438)
T COG1541 231 ENRFGCKAFDIYGLTEGFGPGAGECTERN------GLHIWEDHFIFEIVDPETGEQLPDGERGELVITT 293 (438)
T ss_pred HHHhCCceeeccccccccCCccccccccc------CCCcchhhceeeeecCCcCccCCCCCeeEEEEEe
Confidence 999999999999999997764 2222111 22 2366789999966 4667888 69999985
No 128
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.67 E-value=1.5e-15 Score=149.11 Aligned_cols=369 Identities=19% Similarity=0.156 Sum_probs=253.0
Q ss_pred HHHHHHHhcccCCCeeEEEeC-----CccccHHHHHHHHHHHHH-HHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 3 VFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISS-LLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 3 ~~~~l~~~~~~~~~~~a~~~~-----~~~~Ty~~l~~~~~~~a~-~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
+...++....+++.++|.++- ...+||..+..++.++|+ .|.+ -|+.++|+|.+++.
T Consensus 96 ~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~k-----------------sgl~~~~~vvL~Y~ 158 (1363)
T KOG3628|consen 96 IIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNK-----------------SGLKPGDRVVLYYR 158 (1363)
T ss_pred hHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhc-----------------cCCCCCcEEEEEEE
Confidence 455677777888888998872 258999999999999999 5555 49999999999999
Q ss_pred CC--HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhhccC-CceeccCCCCCCCCCc
Q 015313 77 PS--FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AKFSLIPPVPNVSSET 153 (409)
Q Consensus 77 ~~--~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (409)
.+ .++++..++|...|.+++|+.+..+-+++..+++....+++++.......+........ .+...+-...+..
T Consensus 159 ~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~~~k--- 235 (1363)
T KOG3628|consen 159 KCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTNDFK--- 235 (1363)
T ss_pred hhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhccccc---
Confidence 77 99999999999999999999999999999999999999999999877666554431111 0000000000000
Q ss_pred cccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh--------------------cccCCCCe
Q 015313 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA--------------------WEYTSADQ 213 (409)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--------------------~~~~~~d~ 213 (409)
..-..+....+...-. ..+|-||.+++|.--+++.+|. ++.+++..... ++....+.
T Consensus 236 -~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~ 312 (1363)
T KOG3628|consen 236 -GNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDV 312 (1363)
T ss_pred -ceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccc
Confidence 0000011111111222 8899999999999999999998 66655543221 23455677
Q ss_pred EEEecCchhHHHHHHHHHHHHhcCCEEEEccC---cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhh
Q 015313 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (409)
Q Consensus 214 ~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~ 290 (409)
++-........|++.+++.++++|.|.+.+++ ..+..+... +.+++.+++..--..+.+....+...
T Consensus 313 ~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l----------~~k~R~~~~ltd~~~Lkq~~~ny~~~ 382 (1363)
T KOG3628|consen 313 LLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANL----------ITKYRATWSLTDYAGLKQPVYNYQED 382 (1363)
T ss_pred eeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhh----------hccceeEEEeecccccCcccccccCC
Confidence 77788888888999999999999999999987 344444444 78899999888766666665554432
Q ss_pred hHH---HHHHhhhhhccceEEEeeCCCCCHHHHHHH----HHHhCC------------------cccccccccccccccc
Q 015313 291 DTE---LQAASASAAKQLRLMMCGSSALPLPVMQQW----ETITGH------------------RLLERYGMTEFVMAIS 345 (409)
Q Consensus 291 ~~~---~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~----~~~~~~------------------~v~~~YG~tE~g~~~~ 345 (409)
+-. ..+.+..+++++|.+++....+..+..+-. .+-+|. -....-+++|.+....
T Consensus 383 p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~ 462 (1363)
T KOG3628|consen 383 PKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSI 462 (1363)
T ss_pred cccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccc
Confidence 211 124456789999999999999988755433 222222 1222233455554433
Q ss_pred ccCCCC------------------------------CCccccccccCC-eEEEEeeCCCCC-CCCc-cceEEEeCcchhh
Q 015313 346 NPLRGA------------------------------RKAGTVGNPLPG-VQVKIAEDESGS-DAAG-VGEICVKSPSLFK 392 (409)
Q Consensus 346 ~~~~~~------------------------------~~~~~~G~p~~~-~~~~ivd~~~~~-~~~~-~Gel~v~g~~~~~ 392 (409)
..+... .....+|+..|+ +-+.|++++.+. +..+ +|||||.++++.+
T Consensus 463 r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~ 542 (1363)
T KOG3628|consen 463 RRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGK 542 (1363)
T ss_pred cCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCccc
Confidence 222100 001124555544 567888887754 5555 8999999999999
Q ss_pred hhcCCCcccchh
Q 015313 393 EYWKLPKESRTL 404 (409)
Q Consensus 393 gY~~~~~~t~~~ 404 (409)
+||.-+.-|...
T Consensus 543 ~~~al~~~t~~~ 554 (1363)
T KOG3628|consen 543 LFYALDKQTENT 554 (1363)
T ss_pred ceeeccccccce
Confidence 999988877655
No 129
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=9.7e-15 Score=147.27 Aligned_cols=311 Identities=17% Similarity=0.182 Sum_probs=196.5
Q ss_pred HHHHHHHhcccCCCeeEEEeC--------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEE
Q 015313 3 VFKAAYKKGSMARDSVAIRAD--------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74 (409)
Q Consensus 3 ~~~~l~~~~~~~~~~~a~~~~--------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~ 74 (409)
+.+.+.+.+..+|+.++..+- -.++||.+....++.++..|... +..+|+.|+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~-----------------~~~~~~~v~i~ 100 (1032)
T KOG1178|consen 38 LEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSL-----------------GSLRGTTVAIY 100 (1032)
T ss_pred hhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhc-----------------ccccCceEEEe
Confidence 345777888888888877651 26899999999999999999994 88999999999
Q ss_pred eCCCHHHHHHHHHHHhhCcEEEeCCCCCC----hHHHHHHHhcC-CceEEEechhHHHHHHHHhhccCCceeccCCCCCC
Q 015313 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYP----ESELLHVMHDS-DISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV 149 (409)
Q Consensus 75 ~~~~~~~~~~~~A~~~~G~~~~~i~~~~~----~~~~~~~l~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (409)
+..+.++++..++++++|..+++++|.++ .+++..+.... ....-+.... +... +......+...+....
T Consensus 101 ~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l--~i~~-~~~~~~~~~~sv~~~~-- 175 (1032)
T KOG1178|consen 101 MLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRL--NIID-ILLNSLFPKLSVETIA-- 175 (1032)
T ss_pred ccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhh--hhHH-HHhhccccccchhhcc--
Confidence 99999999999999999999999999999 33222211110 1101111110 0000 0000000000000000
Q ss_pred CCCccccccchhhhccCCCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHH
Q 015313 150 SSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNA 229 (409)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~ 229 (409)
.......-..........-++..+.+.||||+||.||+|..+|..+.....|....+..+..+++-.....+.....-..
T Consensus 176 ~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~ 255 (1032)
T KOG1178|consen 176 DSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKF 255 (1032)
T ss_pred chhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHH
Confidence 00000000011111223346778999999999999999999999999999999888888877765333333222111122
Q ss_pred HHHHHhcCCEEEEccCcch---HHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHH-----Hhhhh
Q 015313 230 LLAPLYAGATVEFMPKFSV---RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA-----ASASA 301 (409)
Q Consensus 230 ~~~~l~~G~~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~-----~~~~~ 301 (409)
+...|..|..+..+..... ..+... +++++++....+|++++.++............ .....
T Consensus 256 ~~~~L~~~~~l~~p~~~~~~~~~~l~~~----------le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~ 325 (1032)
T KOG1178|consen 256 IGALLFNGNNLLVPTATIKDTPGQLAST----------LERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTK 325 (1032)
T ss_pred HhhHhhcCceeecccccCccchhhHHHH----------HHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhccccccc
Confidence 3445566666666655433 333333 78899999999999999888764432111110 11122
Q ss_pred hccceEEEeeCCCCCHHHHHHHHHHhCC-cccccccccccccccc
Q 015313 302 AKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAIS 345 (409)
Q Consensus 302 ~~~lr~v~~gG~~~~~~~~~~~~~~~~~-~v~~~YG~tE~g~~~~ 345 (409)
.+.|+....+|++....+...+...+.. -...-|+.++..+...
T Consensus 326 ~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s 370 (1032)
T KOG1178|consen 326 RSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVS 370 (1032)
T ss_pred chhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCcccee
Confidence 4489999999999999998866665522 1222388888766544
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.24 E-value=3.1e-10 Score=107.28 Aligned_cols=150 Identities=11% Similarity=0.053 Sum_probs=99.4
Q ss_pred CcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEec-CchhHHHHHHHHHHHHhcCCE-EEEccC
Q 015313 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCL-PLHHVHGLFNALLAPLYAGAT-VEFMPK 245 (409)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~-pl~~~~g~~~~~~~~l~~G~~-i~~~~~ 245 (409)
.-..+..||||||.|-.+..+............... +...++++...+ --.+ ++..+.+... +...+-
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~-------ly~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNN-------LYQSVNNRWISLDFFDL 172 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChh-------HHHHHHhccceeeecCC
Confidence 345677899999999999999987654433332221 333444444332 1111 1222222211 222221
Q ss_pred -cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEEeeCCCCCHHHHHHHH
Q 015313 246 -FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (409)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~ 324 (409)
-+.+..++. |++++|+++.+.|+.+..|++..+... .+ ..++.++++||.+++...+.++
T Consensus 173 ~~~~~~~l~~----------L~~~~P~~L~g~pS~l~~LA~~~~~~~--------l~-~~~k~ii~~~E~l~~~~r~~Ie 233 (430)
T TIGR02304 173 LAPFQAHIKR----------LNQRKPSIIVAPPSVLRALALEVMEGE--------LT-IKPKKVISVAEVLEPQDRELIR 233 (430)
T ss_pred CcCHHHHHHH----------HHHhCCCEEEEcHHHHHHHHHHHHhcC--------CC-CCceEEEEccCCCCHHHHHHHH
Confidence 245555565 788999999999999999998643211 12 3689999999999999999999
Q ss_pred HHhCCcccccccccccccccccc
Q 015313 325 TITGHRLLERYGMTEFVMAISNP 347 (409)
Q Consensus 325 ~~~~~~v~~~YG~tE~g~~~~~~ 347 (409)
+.||++|++.||+|| |++...+
T Consensus 234 ~~fg~~V~~~YG~tE-g~la~eC 255 (430)
T TIGR02304 234 NVFKNTVHQIYQATE-GFLASTC 255 (430)
T ss_pred HHhCCCeeEccCCch-hheEEec
Confidence 999999999999999 5544433
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.62 E-value=3.2e-06 Score=78.41 Aligned_cols=202 Identities=17% Similarity=0.225 Sum_probs=119.1
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---c-ccCCCC-eEEEecCchh----HHHHHHHHHHHHhcCC
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---W-EYTSAD-QFLHCLPLHH----VHGLFNALLAPLYAGA 238 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~-~~~~~d-~~l~~~pl~~----~~g~~~~~~~~l~~G~ 238 (409)
.++++..++.||||||.|--+.+.+..+..+...+... + ...... .++...|-.. ...........+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 45678889999999999877777666555554333322 2 222222 3333334321 1111122333344555
Q ss_pred EEEEcc-CcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhc-cceEEEeeC----
Q 015313 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRLMMCGS---- 312 (409)
Q Consensus 239 ~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~-~lr~v~~gG---- 312 (409)
...+-. .++.+.+...+.+. ....++..+++.|.++-.++..+++.. ....++ ..+.+-.||
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~------~~~~~pv~l~Gftf~~~~~~~~l~~~~------~~~~L~~~s~vi~~GGwK~~ 234 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRA------EHSGEPVLLFGFTFFIWFLLDELEERG------IRFRLPKGSIVIHGGGWKGR 234 (365)
T ss_pred eeeecCCccCHHHHHHHHHHH------HhCCCCEEEECchHHHHHHHHHHHhcC------CcccCCCCCEEEeCCCCCcc
Confidence 544422 35667666665432 456789999999998877776654322 112333 456666776
Q ss_pred --CCCCH-HHHHHHHHHhCC----ccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCC-CCCCCc-cceE
Q 015313 313 --SALPL-PVMQQWETITGH----RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDES-GSDAAG-VGEI 383 (409)
Q Consensus 313 --~~~~~-~~~~~~~~~~~~----~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~-~~~~~~-~Gel 383 (409)
+.++. +..+.+.+.||+ .+++.|||||.......+...... ..|. +.|+|+++ ++++.| .|-|
T Consensus 235 ~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~~------~p~w--V~iRDp~tl~~~~~Ge~Gli 306 (365)
T PF04443_consen 235 RKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGHFH------VPPW--VIIRDPETLEPLPPGETGLI 306 (365)
T ss_pred ccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCccc------CCCe--EEEECCCCCcCCCCCCeeEE
Confidence 45654 555666777887 788999999987655544322221 1133 66778776 667777 8999
Q ss_pred EEeCcc
Q 015313 384 CVKSPS 389 (409)
Q Consensus 384 ~v~g~~ 389 (409)
.+-.+.
T Consensus 307 ~vidl~ 312 (365)
T PF04443_consen 307 QVIDLA 312 (365)
T ss_pred EEEccc
Confidence 887653
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.90 E-value=0.092 Score=49.58 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=76.4
Q ss_pred cccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHHHHHHHHHhhCcEEEeCCCCCC
Q 015313 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
-+|+.|....+..+|+.|.. +|..+||+|.....-+ ..-....+|+.++|+.++|+.+...
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-----------------~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~ 171 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-----------------AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNT 171 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-----------------ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccH
Confidence 68999999999999999999 5999999999887722 1115678899999999999988533
Q ss_pred hHHHHHHHhcCCceEEEechhHHHHHHHHhhccC
Q 015313 104 ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG 137 (409)
Q Consensus 104 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 137 (409)
. .-..++++.++.+|.+.+.+...+.+...+.+
T Consensus 172 ~-~~~~l~~df~~tvI~~tps~~l~lae~~~~~G 204 (438)
T COG1541 172 E-RQLELMKDFKPTVIAATPSYLLYLAEEAEEEG 204 (438)
T ss_pred H-HHHHHHHhcCCcEEEEChHHHHHHHHHHHHcC
Confidence 3 34568899999999999998877777655543
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=94.53 E-value=0.23 Score=49.16 Aligned_cols=77 Identities=18% Similarity=0.216 Sum_probs=45.8
Q ss_pred ccccceeeecc-hHHHHHHHHhhhhhhHHHHH-----------------------------HhhhhhccceEEEeeCCCC
Q 015313 266 AGEAITAFTGV-PTMYTRLIQGYEAMDTELQA-----------------------------ASASAAKQLRLMMCGSSAL 315 (409)
Q Consensus 266 ~~~~vt~~~~~-P~~l~~l~~~~~~~~~~~~~-----------------------------~~~~~~~~lr~v~~gG~~~ 315 (409)
.+..++.+.+. |+++..+.+.++.....+-. .-..-.+.|+.|.+-+..-
T Consensus 200 ~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~G~~~~~~p~p~rA~~L~~~~~~~~~~~~~lWP~L~~v~~~~~g~ 279 (528)
T PF03321_consen 200 QDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRDGTLSLLRPNPERAAELRAEFEKGRGIPKRLWPNLKLVSCWGGGS 279 (528)
T ss_dssp CGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS--C-S--HHHHHHHHHHHCCSTTHHHHHSTT--EEEEE-SGG
T ss_pred cccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcCCccccCCCCHHHHHHHHHhhcccCCCHHHhCCCCcEEEEEcCCC
Confidence 36788888775 55666666665543332210 0233478999777766666
Q ss_pred CHHHHHHHHHHhCC-c-cccccccccccc
Q 015313 316 PLPVMQQWETITGH-R-LLERYGMTEFVM 342 (409)
Q Consensus 316 ~~~~~~~~~~~~~~-~-v~~~YG~tE~g~ 342 (409)
.....+++++.+|. + +..+|++||+-+
T Consensus 280 ~~~y~~~l~~~~g~~~~~~~~y~ASEg~i 308 (528)
T PF03321_consen 280 MAPYAPKLREYFGGVPIQSKGYGASEGFI 308 (528)
T ss_dssp GGGGHHHHHHHHTTS-EEE-EEEETTEEE
T ss_pred hHHHHHHHHHHcCCCceeeccccccceEE
Confidence 66777888888853 3 446899999643
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=89.90 E-value=5.4 Score=39.86 Aligned_cols=31 Identities=16% Similarity=0.182 Sum_probs=26.1
Q ss_pred CCCCCcEEEEecCCCCC-CCceeeechHHHHH
Q 015313 167 QRGEDPALIVYTSGTTG-KPKGVVHTHKSIDA 197 (409)
Q Consensus 167 ~~~~~~~~i~~TSGtTG-~pK~v~~t~~~l~~ 197 (409)
..++.+.++..|||||| ++|-+++|+..+-.
T Consensus 98 L~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 98 LCSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred cCCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 34667789999999997 69999999997765
No 135
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.50 E-value=6.9 Score=37.93 Aligned_cols=84 Identities=13% Similarity=0.048 Sum_probs=62.6
Q ss_pred cccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCCC
Q 015313 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
.+|.+++...+...+..+.. +|+.+||++.+..+.+.. .....+++...|+.++|...
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~-----------------~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--- 164 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVS-----------------QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK--- 164 (445)
T ss_pred eecHHHHHHHHHHHHHHHHH-----------------cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---
Confidence 57899999888888888877 488999999998876542 23445778889998887653
Q ss_pred hHHHHHHHhcCCceEEEechhHHHHH
Q 015313 104 ESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 104 ~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
......++++.++.+++......-.+
T Consensus 165 ~~~~~~~i~~~~~t~l~~~ps~ll~L 190 (445)
T TIGR03335 165 CTFPIRIIESYRPTGIVASVFKLLRL 190 (445)
T ss_pred hhHHHHHHHHhCCCEEEECHHHHHHH
Confidence 23345678899999998877654433
No 136
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=86.62 E-value=7.5 Score=37.29 Aligned_cols=88 Identities=15% Similarity=0.214 Sum_probs=65.1
Q ss_pred cccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHHHHHHHHHhhCcEEEeCCCCCC
Q 015313 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
.+|..++......++..+.. +|+++||++........ ......++....|+.+++++...
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-----------------~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 155 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-----------------AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ- 155 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-----------------cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-
Confidence 56778887776667777766 48899999887665432 22234567888999999887654
Q ss_pred hHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 104 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.+.+-..+++.++.+++..+..+..+.+
T Consensus 156 ~~~~~~~i~~~~~t~l~~~Ps~l~~L~~ 183 (422)
T TIGR02155 156 TEKQVQLIQDFKPDIIMVTPSYMLNLLE 183 (422)
T ss_pred HHHHHHHHHHHCCCEEEEcHHHHHHHHH
Confidence 4667788999999999999987766544
No 137
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=85.34 E-value=14 Score=35.60 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=73.3
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC--CCHHHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK--PSFEFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~--~~~~~~ 82 (409)
.||.++-+. .+.++|-.++.+.+..++..+ |+...+++++-.| .+.-.+
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~--------------------g~~e~~~i~~~~Pl~H~~G~~ 291 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA--------------------GYNEKHRICIPNPLYHCFGCV 291 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh--------------------CcCcceEEEecCchHHHHHHH
Confidence 466666554 346999999999998888776 6666444443333 234556
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (409)
+..+|++..|+..|.-.|...+...-..+++.+...++..+..+-.+.+.
T Consensus 292 ~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~ 341 (596)
T KOG1177|consen 292 LGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNI 341 (596)
T ss_pred HHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcc
Confidence 77888999999999888888888888889999999999998766544443
No 138
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=80.88 E-value=16 Score=35.79 Aligned_cols=86 Identities=19% Similarity=0.209 Sum_probs=64.5
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|+..+...+...... ++++.++++....+... .+...+++++..|+.+++. +..
T Consensus 184 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~ 242 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY--------------------LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVF 242 (513)
T ss_pred EEEecHHHHHHHHHHHHh--------------------hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcC
Confidence 368888887666554433 37788999988877543 3345678889999988876 456
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+++.+...+++.++.++...+..+..+..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 243 DPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred CHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 78888899999999999998887766544
No 139
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=79.03 E-value=25 Score=34.99 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=67.8
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~ 82 (409)
.++.+|++. ++-.+|++.+...+...... .++.++|++....|.. .-+.
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~~ 240 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKF--------------------FSPKEDDVMMSFLPPFHAYGFN 240 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh--------------------cCCCCCceEEEecchHhhhhhH
Confidence 456677665 23478888887665444332 3677899888777743 2233
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
...+..+..|+.++......+++.+...+++.++.++...+..+..+..
T Consensus 241 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 241 SCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred HHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 3456677788887766555678888899999999999999887766544
No 140
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.70 E-value=23 Score=34.69 Aligned_cols=85 Identities=11% Similarity=0.038 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH-HHHHHHHHhhCcEEEeCCCCCCh
Q 015313 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYPE 104 (409)
Q Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~-~~~~~A~~~~G~~~~~i~~~~~~ 104 (409)
.+|++++...+...... .+++++|++....+....+ ....++++..|+.++..+.. +.
T Consensus 186 ~~t~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~ 244 (521)
T PRK06187 186 VLSHRNLFLHSLAVCAW--------------------LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DP 244 (521)
T ss_pred EeehHHHHHHHHHHHHh--------------------hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CH
Confidence 67888888766665552 3889999998888755322 33345578889988877665 88
Q ss_pred HHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 105 SELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 105 ~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+.+...+++.++.++++.+.....+..
T Consensus 245 ~~~~~~l~~~~~t~l~~~p~~~~~l~~ 271 (521)
T PRK06187 245 ENLLDLIETERVTFFFAVPTIWQMLLK 271 (521)
T ss_pred HHHHHHHHHhCCeEEEchHHHHHHHHc
Confidence 889999999999999999887766544
No 141
>PRK08315 AMP-binding domain protein; Validated
Probab=75.63 E-value=34 Score=34.04 Aligned_cols=84 Identities=12% Similarity=0.081 Sum_probs=60.9
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|.+.+...+..+... ++++++|++....+-. ..++..+++.+..|+..+......
T Consensus 217 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 276 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA--------------------MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGF 276 (559)
T ss_pred EEeeHHHHHHHHHHHHHh--------------------cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCC
Confidence 467887776555544333 4788999998877752 344556788888898887555566
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
++..+-..+++.++.+++..+..+..
T Consensus 277 ~~~~~~~~l~~~~~t~~~~~P~~~~~ 302 (559)
T PRK08315 277 DPLATLAAVEEERCTALYGVPTMFIA 302 (559)
T ss_pred CHHHHHHHHHHcCCeEEecchHHHHH
Confidence 77888889999999999988876543
No 142
>PRK12583 acyl-CoA synthetase; Provisional
Probab=73.37 E-value=43 Score=33.29 Aligned_cols=83 Identities=12% Similarity=0.100 Sum_probs=60.3
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC--CHHHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~--~~~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|+..+...+..+... ++++++|++....+- ..-.+...++++..|+.++......
T Consensus 219 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~ 278 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES--------------------LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAF 278 (558)
T ss_pred EEeeHHHHHHHHHHHHHH--------------------hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCC
Confidence 477888886655554433 377889998877763 2455666788888898877444556
Q ss_pred ChHHHHHHHhcCCceEEEechhHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYRE 127 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~ 127 (409)
++..+-..+++.++.+++..+..+.
T Consensus 279 ~~~~~~~~i~~~~~t~l~~~P~~~~ 303 (558)
T PRK12583 279 DPLATLQAVEEERCTALYGVPTMFI 303 (558)
T ss_pred CHHHHHHHHHHcCCeEEeccHHHHH
Confidence 7778888899999999998887654
No 143
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=72.22 E-value=34 Score=34.22 Aligned_cols=69 Identities=13% Similarity=0.212 Sum_probs=52.5
Q ss_pred ccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
++++++|++....+.... +...+++.+..|+..+......+++.+...+++.++.++...+..+..+..
T Consensus 241 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 241 LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 377888987666554432 234567888899988877667788899999999999999999887776643
No 144
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=71.47 E-value=39 Score=30.36 Aligned_cols=82 Identities=15% Similarity=0.230 Sum_probs=55.2
Q ss_pred eEEEe-CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEE
Q 015313 18 VAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (409)
Q Consensus 18 ~a~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~ 96 (409)
++|+. .+..+-.+-+. |...+|..|+++ |-.|..++.+....... .+...|..+.
T Consensus 2 i~ir~Da~~~iG~GHv~-Rcl~LA~~l~~~---------------------g~~v~f~~~~~~~~~~~--~i~~~g~~v~ 57 (279)
T TIGR03590 2 ILFRADASSEIGLGHVM-RCLTLARALHAQ---------------------GAEVAFACKPLPGDLID--LLLSAGFPVY 57 (279)
T ss_pred EEEEecCCccccccHHH-HHHHHHHHHHHC---------------------CCEEEEEeCCCCHHHHH--HHHHcCCeEE
Confidence 44544 34667777765 567889999764 55677777766554433 3356777776
Q ss_pred eCCCCC----ChHHHHHHHhcCCceEEEech
Q 015313 97 PLALSY----PESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 97 ~i~~~~----~~~~~~~~l~~~~~~~vi~~~ 123 (409)
.++... ..+++..++++.+++++|+|.
T Consensus 58 ~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~ 88 (279)
T TIGR03590 58 ELPDESSRYDDALELINLLEEEKFDILIVDH 88 (279)
T ss_pred EecCCCchhhhHHHHHHHHHhcCCCEEEEcC
Confidence 664432 244688889999999999996
No 145
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=70.59 E-value=58 Score=30.67 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=65.3
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH-HHHHHHHHHhhCcEEEeCCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~-~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
-.+|+..+...+..+... .+++++|++....+.+.. .+..+++.+..|+..+..+....
T Consensus 138 v~~s~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 197 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARR--------------------YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEE 197 (408)
T ss_pred EEeccHHHHHHHHHHHHh--------------------cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhc
Confidence 467888887777766653 366789999888775533 45566777888887777665544
Q ss_pred --hHHHHHHHhcCCceEEEechhHHHHHHHH
Q 015313 104 --ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (409)
Q Consensus 104 --~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (409)
+..+..++++.++..++..+.....+...
T Consensus 198 ~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 198 RDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred cCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 67888899999999999999888766543
No 146
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=69.45 E-value=42 Score=32.03 Aligned_cols=84 Identities=8% Similarity=-0.020 Sum_probs=61.1
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH-HHHHHHHHHHhhCcEEEeCCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~-~~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
-.+|++.+...+......+ +++++|++....+-.. ..+..+++++..|+.++..+..
T Consensus 129 v~~s~~~~~~~~~~~~~~~--------------------~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-- 186 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL--------------------GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-- 186 (436)
T ss_pred EEEehHHHHHHHHHHHhhc--------------------CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--
Confidence 4788888887766655433 7788999988877542 2233467888889988877543
Q ss_pred hHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 104 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+.+...+++.++.++...+..+..+.+
T Consensus 187 -~~~~~~l~~~~~t~~~~~P~~l~~l~~ 213 (436)
T TIGR01923 187 -NQLLEMIANERVTHISLVPTQLNRLLD 213 (436)
T ss_pred -HHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 377888999999999998877655443
No 147
>PRK06188 acyl-CoA synthetase; Validated
Probab=67.85 E-value=68 Score=31.61 Aligned_cols=85 Identities=16% Similarity=0.060 Sum_probs=63.0
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCCh
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~ 104 (409)
-.+|+..+...+...... .+++.++++....+-+..+...+++.+..|+..+..+. .++
T Consensus 186 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~ 244 (524)
T PRK06188 186 VMGTHRSIATMAQIQLAE--------------------WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDP 244 (524)
T ss_pred eeeehHHHHHHHHHHHhh--------------------cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCH
Confidence 357777777655543332 37788999998888775555666777888988887754 567
Q ss_pred HHHHHHHhcCCceEEEechhHHHHHH
Q 015313 105 SELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 105 ~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+.+...+++.++.+++..+..+..+.
T Consensus 245 ~~~~~~i~~~~~t~~~~~P~~l~~l~ 270 (524)
T PRK06188 245 AEVLRAIEEQRITATFLVPTMIYALL 270 (524)
T ss_pred HHHHHHHHHhCCEEEEehHHHHHHHH
Confidence 88889999999999999887765543
No 148
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=67.61 E-value=37 Score=32.21 Aligned_cols=88 Identities=23% Similarity=0.140 Sum_probs=62.2
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++. -..-.+|+..+...+..+... .+.+.++++....+-+. .++..+++++..|+..+.++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc--eeeeeecccccccccccccc
Confidence 456777766 234578889888777766544 46788898888888763 33456889999999999987
Q ss_pred C-cchHHHHHHHHhhcCCCCCCccccceeeec
Q 015313 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (409)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~ 275 (409)
. .+...+... +++.++++++.
T Consensus 78 ~~~~~~~~~~~----------l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHI----------LRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHH----------HHHHTESEEEE
T ss_pred ccccccccccc----------ccccceeEEEE
Confidence 5 455555555 66678899886
No 149
>PLN03051 acyl-activating enzyme; Provisional
Probab=67.38 E-value=44 Score=32.81 Aligned_cols=69 Identities=4% Similarity=-0.030 Sum_probs=50.3
Q ss_pred ccCCCCCEEEEEeCCCHH-HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~-~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.++.++|++....|-+.. ....+++++..|+.++..+.....+.+-..+++.++.++...+..+..+..
T Consensus 155 ~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 155 MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 367788988776664321 223567788899988877654566778889999999999999887765543
No 150
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=67.26 E-value=56 Score=32.66 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=66.2
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC-HHHHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVA 83 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~-~~~~~ 83 (409)
.++.+|++. ++-.+|...+...+...... .++.++|++....|-. .--+.
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~~ 229 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAI--------------------VGYGEDDVYLHTAPLCHIGGLS 229 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhh--------------------cCCCCCCEEEEecCchhhccHH
Confidence 356666654 12467887776554443322 3778899888777743 22234
Q ss_pred HHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 84 ~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
..++.+..|+..+.. +..++..+...+++.++.++...+.....+..
T Consensus 230 ~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 230 SALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred HHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 466778888887765 45678888899999999999999887766544
No 151
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=66.08 E-value=53 Score=32.18 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=64.3
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH-HHHHHHHHHhhCcEEEeCCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~-~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
-.+|...+...+......+ +++++|++...++-+.. .+..+++++..|+.++..+ ...
T Consensus 179 v~~t~~~l~~~~~~~~~~~--------------------~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~ 237 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL--------------------ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLL 237 (515)
T ss_pred EEEecHHHHHHHHHHHHHh--------------------CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCC
Confidence 4678888877766655433 66789999888885532 3445678888999888664 457
Q ss_pred hHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 104 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
++.+...+++.++.++...+.....+..
T Consensus 238 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 238 PRDVLKALEKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHHHHHHHHHcCCceEecChHHHHHHHh
Confidence 8888899999999999999987766543
No 152
>PRK08308 acyl-CoA synthetase; Validated
Probab=64.90 E-value=87 Score=29.75 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=62.6
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|++.+...+..+...+ ++..+|++...+|.. ..++..+++.+..|+.++..+. .
T Consensus 119 v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~ 177 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL--------------------NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-K 177 (414)
T ss_pred EEEehHhHHHHHHHHHHhh--------------------CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-C
Confidence 4688888877666555443 557788887777754 3345567888889998777654 4
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
++..+...+++.++.+++..+..+..+..
T Consensus 178 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 178 NPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred CHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 66777788999999999998877766544
No 153
>PRK06164 acyl-CoA synthetase; Validated
Probab=64.62 E-value=68 Score=31.73 Aligned_cols=96 Identities=11% Similarity=0.040 Sum_probs=68.7
Q ss_pred CCeeEEEe--C-------CccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC-HHHHHH
Q 015313 15 RDSVAIRA--D-------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVAG 84 (409)
Q Consensus 15 ~~~~a~~~--~-------~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~-~~~~~~ 84 (409)
++.++++. . +-.+|...+...+..++..+ ++.+++++...+|.+ .-.+..
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~l~~~p~~~~~g~~~ 239 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY--------------------GYDPGAVLLAALPFCGVFGFST 239 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc--------------------CCCCCCEEEEcCCchhHHHHHH
Confidence 45666665 1 23678888877666555554 667899999888854 323445
Q ss_pred HHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 85 ~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+++.+..|+.++..+ ......+...+++.++.+++..+..+..+..
T Consensus 240 ~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 240 LLGALAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred HHHHHhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677888888877664 4567788889999999999999887766544
No 154
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=64.25 E-value=39 Score=31.76 Aligned_cols=74 Identities=19% Similarity=0.270 Sum_probs=52.6
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC-----CCChHHHHHHHhcCCceEEEec-----hhHHHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLST-----EDYREVLQNV 132 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~-----~~~~~~~~~~l~~~~~~~vi~~-----~~~~~~~~~~ 132 (409)
+++++||-|++ ++..|+...=++...|+.+|.++- +.+++.+...+... .+.||.- .-..+.+..+
T Consensus 69 l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~~dm~~i~~l 144 (374)
T COG0399 69 LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQPCDMDAIMAL 144 (374)
T ss_pred cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCCCCHHHHHHH
Confidence 48999995553 467799999999999999998854 56788888877664 4555543 2345666677
Q ss_pred hhccCCce
Q 015313 133 ASKSGAKF 140 (409)
Q Consensus 133 ~~~~~~~~ 140 (409)
.++.+..+
T Consensus 145 a~~~~l~v 152 (374)
T COG0399 145 AKRHGLPV 152 (374)
T ss_pred HHHcCCeE
Confidence 66666443
No 155
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=64.14 E-value=74 Score=30.87 Aligned_cols=66 Identities=5% Similarity=-0.010 Sum_probs=50.6
Q ss_pred cCCCCCEEEEEeCCCH-HHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 64 AGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~-~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+++++|++....|-.. ..+..+++.+..|+.++..+ ..+..++...+++.++.++...+..+..+.
T Consensus 178 ~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 178 GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 7788999998887432 22334567777898877765 467888999999999999999998776654
No 156
>PRK09274 peptide synthase; Provisional
Probab=62.11 E-value=67 Score=31.93 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=62.6
Q ss_pred CCCCcEEEEecCCC-CCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc
Q 015313 168 RGEDPALIVYTSGT-TGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (409)
Q Consensus 168 ~~~~~~~i~~TSGt-TG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~ 243 (409)
.++.++++....++ ....+...+|++.+...+..+...+ +...+|++...++-+.-. +..+++++..|+..+.+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEc
Confidence 34556554432222 1223344789999988777665544 678899999888765433 44588999999999988
Q ss_pred cCc-chHHHHHHHHhhcCCCCCCccccceeeecch
Q 015313 244 PKF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (409)
Q Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (409)
+.. ..+.+... +++.++..++..+
T Consensus 97 ~~~~~~~~l~~~----------l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQC----------LAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHH----------HHhcCCCEEEecc
Confidence 754 44444444 4556666666543
No 157
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=61.95 E-value=1.1e+02 Score=30.42 Aligned_cols=85 Identities=12% Similarity=0.179 Sum_probs=61.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|+..+...+...... +++++++++....+-+- .++..+++.+..|+.++..+ ..
T Consensus 215 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~ 273 (547)
T PRK13295 215 VMHTANTLMANIVPYAER--------------------LGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IW 273 (547)
T ss_pred EEeccHHHHHHHHHHHHH--------------------hCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CC
Confidence 367888776665554332 37788999888877652 24556778888999877664 45
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+.+.+...+++.++.+++..+.....+.
T Consensus 274 ~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 274 DPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred CHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 7788888999999999988876665443
No 158
>PRK07470 acyl-CoA synthetase; Validated
Probab=61.01 E-value=97 Score=30.53 Aligned_cols=67 Identities=13% Similarity=0.070 Sum_probs=47.9
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeC-CCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i-~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+..++|++....|-+..+-...+..+..|+..+.+ ....+++.+...+++.++.++...+..+..+.
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 56778988888886644433334445556655544 34567888999999999999999998876653
No 159
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.72 E-value=99 Score=30.62 Aligned_cols=95 Identities=7% Similarity=0.016 Sum_probs=66.5
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~ 82 (409)
.++.+|++. +.-.+|+..+...+......+ ++.++|++....|-.- .+.
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~d~~l~~~p~~~~~g~~ 247 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS--------------------NSTPESVVLAVLPLFHVTGMV 247 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh--------------------CCCCCceEEEEcCchHHHHHH
Confidence 356677664 124678888877665544333 6678898877776432 234
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
..+++.+..|+.++..+. .+...+...+++.++.++...+.....+
T Consensus 248 ~~~~~~l~~G~~i~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 248 HSMNAPIYAGATVVLMPR-WDREAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred HHHHHHHHcCCeEEecCC-CCHHHHHHHHHHhcCceecccHHHHHHH
Confidence 556788889998887754 5777888899999999999888766544
No 160
>PRK08316 acyl-CoA synthetase; Validated
Probab=60.14 E-value=78 Score=31.06 Aligned_cols=85 Identities=8% Similarity=-0.048 Sum_probs=60.7
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|++.+...+... ... +++++++++....|-.- .+...+++++..|+.+++.+. .
T Consensus 189 v~~s~~~l~~~~~~~---~~~-----------------~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~-~ 247 (523)
T PRK08316 189 AMLTHRALIAEYVSC---IVA-----------------GDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDA-P 247 (523)
T ss_pred EEEecHHHHHHHHHH---HHH-----------------hCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecC-C
Confidence 368888876554333 333 47888999988877542 233456677888999888754 4
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+++.+...+++.++.++++.+..+..+.
T Consensus 248 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 275 (523)
T PRK08316 248 DPELILRTIEAERITSFFAPPTVWISLL 275 (523)
T ss_pred CHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 6788899999999999999887665443
No 161
>PLN02246 4-coumarate--CoA ligase
Probab=59.86 E-value=89 Score=30.92 Aligned_cols=99 Identities=12% Similarity=0.023 Sum_probs=66.2
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~ 82 (409)
.|+.++++. ++-.+|++.+.............. +++.++|++....|-.. .+.
T Consensus 177 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~----------------~~~~~~d~~l~~~pl~~~~~~~ 240 (537)
T PLN02246 177 SPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPN----------------LYFHSDDVILCVLPMFHIYSLN 240 (537)
T ss_pred CccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccc----------------cCCCCCcEEEEeechHHHHHHH
Confidence 356666654 124678887766554443322222 57888999988877432 223
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
..+++.+..|+.++..+. .+.+.+...+++.++.++...+.....+
T Consensus 241 ~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 286 (537)
T PLN02246 241 SVLLCGLRVGAAILIMPK-FEIGALLELIQRHKVTIAPFVPPIVLAI 286 (537)
T ss_pred HHHHHHHhcCCEEEEeCC-CCHHHHHHHHHHhCceEEEcchHHHHHH
Confidence 446677888998888764 5677888899999999988887665443
No 162
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=59.75 E-value=24 Score=30.55 Aligned_cols=52 Identities=17% Similarity=0.123 Sum_probs=41.0
Q ss_pred ccCCCCCEEEEEeCCC--HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCc
Q 015313 63 LAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDI 116 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~--~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~ 116 (409)
+++.++|++. .+|-. .-+...+++++..|+..+.+ +.++++.+-..+++.++
T Consensus 173 ~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 173 AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 4889999999 88854 24445789999999998888 57788888888887764
No 163
>PLN02736 long-chain acyl-CoA synthetase
Probab=59.50 E-value=1.5e+02 Score=30.26 Aligned_cols=86 Identities=7% Similarity=-0.130 Sum_probs=63.1
Q ss_pred eeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (409)
..+|++.+...+..+... .+..++|++...++-+--. +...++++..|+.++.++. .+.+.+...
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 145 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPLYDTLGPDAVKFI--------- 145 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeecCCCHHHHHHH---------
Confidence 457999988877766554 4788999998888876533 3457888999999997764 456666555
Q ss_pred CCccccceeeecchHHHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRLIQ 285 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l~~ 285 (409)
++.-+++.+++.+..+..+..
T Consensus 146 -l~~~~~~~l~~~~~~~~~~~~ 166 (651)
T PLN02736 146 -VNHAEVAAIFCVPQTLNTLLS 166 (651)
T ss_pred -HhccCCCEEEECHHHHHHHHH
Confidence 677889999998877665543
No 164
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=59.48 E-value=1e+02 Score=29.97 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=45.2
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHH-HHhhCcEEE--------------eCCCCCChHHHHHHHhcCCc------eEEEe
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAV--------------PLALSYPESELLHVMHDSDI------SMVLS 121 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A-~~~~G~~~~--------------~i~~~~~~~~~~~~l~~~~~------~~vi~ 121 (409)
+++++||.| + +..++...-| +...|++++ |...+.+.+.+...++...+ +++++
T Consensus 112 l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~it 186 (460)
T PRK13237 112 IAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVT 186 (460)
T ss_pred hCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEe
Confidence 689999965 3 3334444444 788888776 33446788888888875432 34444
Q ss_pred ch---------hHHHHHHHHhhccCCce
Q 015313 122 TE---------DYREVLQNVASKSGAKF 140 (409)
Q Consensus 122 ~~---------~~~~~~~~~~~~~~~~~ 140 (409)
.. +..+.+.++.++.+...
T Consensus 187 vn~~GGqpvs~~~m~~I~elA~~~Gl~V 214 (460)
T PRK13237 187 VNLAGGQPVSMANMRAVRELCDKHGIKV 214 (460)
T ss_pred cccCCCeeCCHHhHHHHHHHHHHcCCEE
Confidence 33 24466666666666554
No 165
>PRK11761 cysM cysteine synthase B; Provisional
Probab=59.19 E-value=1.1e+02 Score=27.75 Aligned_cols=58 Identities=12% Similarity=-0.043 Sum_probs=42.0
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
+.+|++|+- ...+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 60 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 466776544 5556667777788888998666554544455677788999999999986
No 166
>PLN03013 cysteine synthase
Probab=58.92 E-value=77 Score=30.51 Aligned_cols=60 Identities=8% Similarity=-0.072 Sum_probs=44.2
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
+++|...++.....-.-+.+.+++...|.-+..+-|...+.+....++..++++++++..
T Consensus 171 l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 477865556666667777777888889986665544445666778889999999999754
No 167
>PRK07638 acyl-CoA synthetase; Validated
Probab=58.45 E-value=92 Score=30.31 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=61.4
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH-HHHHHHHHHHhhCcEEEeCCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALSYP 103 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~-~~~~~~~A~~~~G~~~~~i~~~~~ 103 (409)
-.+|.+.+...+...+.. .+++.+|++....+-.. .++...+..+..|+..+..+ ..+
T Consensus 161 v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~-~~~ 219 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVHD--------------------FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMR-KFI 219 (487)
T ss_pred EEEecHHHHHHHHHHHHh--------------------cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcC-CCC
Confidence 367777776555443332 37788999988776443 23455666778898887664 567
Q ss_pred hHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 104 ~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+.++...+++.++.++...+..+..+..
T Consensus 220 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 247 (487)
T PRK07638 220 PNQVLDKLETENISVMYTVPTMLESLYK 247 (487)
T ss_pred HHHHHHHHHHcCCeEEEeCcHHHHHHHh
Confidence 8888899999999999999887766554
No 168
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=57.95 E-value=1.2e+02 Score=28.48 Aligned_cols=59 Identities=15% Similarity=0.003 Sum_probs=44.6
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
+++|....+....+-.-+.+.++|...|.-+..+-|...+.+....++..++++++++.
T Consensus 107 i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 56786555556667777888888899998666665555556667889999999999974
No 169
>PLN02565 cysteine synthase
Probab=57.15 E-value=1.6e+02 Score=27.21 Aligned_cols=60 Identities=10% Similarity=-0.074 Sum_probs=45.2
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
+.+|...++.....-.-+...+++...|..+..+-|...+......++..+++++++++.
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 367866556666666677777888889987776655556666778899999999999863
No 170
>PLN03052 acetate--CoA ligase; Provisional
Probab=55.70 E-value=1.3e+02 Score=31.34 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=66.4
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++.-..+..+.+ ...+|++.|...+..+... .+..++|++...+|..--. +..+++++..|+..+.++
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 456676654433221222 3468999998877776554 4788999999999976433 445888999999988775
Q ss_pred -CcchHHHHHHHHhhcCCCCCCccccceeeecchH
Q 015313 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (409)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (409)
.+..+.+... ++..+++.+++...
T Consensus 265 p~~~~~~l~~r----------l~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DSFAPSEIATR----------LKISKAKAIFTQDV 289 (728)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEcCc
Confidence 4667777776 44556777766553
No 171
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=55.03 E-value=1.1e+02 Score=27.77 Aligned_cols=58 Identities=12% Similarity=-0.014 Sum_probs=38.3
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
+++|++|. =.-..---+...+.|...|.-++.+=|..-..+...+|+..++.+++++.
T Consensus 59 l~pG~tIV-E~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIV-EATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEE-EcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 78899443 22223445555666667777555554434444567789999999999997
No 172
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=54.88 E-value=1.2e+02 Score=31.43 Aligned_cols=84 Identities=12% Similarity=0.109 Sum_probs=58.7
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC--CHHHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~--~~~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|++.+...+..+... .++.++|++...+|- ...+...+++.+..|+.++..+...
T Consensus 383 v~~sh~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~ 442 (718)
T PRK08043 383 VVHSHKSLLANVEQIKTI--------------------ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPL 442 (718)
T ss_pred EEEcHHHHHHHHHHHHHh--------------------hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcc
Confidence 478888887766555432 377889999888774 2344456778888999888665444
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
....+...+++.++.++...+.....
T Consensus 443 ~~~~~~~~i~~~~vt~~~~~p~~~~~ 468 (718)
T PRK08043 443 HYRIVPELVYDRNCTVLFGTSTFLGN 468 (718)
T ss_pred cHHHHHHHHHhcCCeEEEchHHHHHH
Confidence 45566677888899988877765543
No 173
>PRK07788 acyl-CoA synthetase; Validated
Probab=54.87 E-value=81 Score=31.33 Aligned_cols=83 Identities=20% Similarity=0.126 Sum_probs=60.3
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+...+ +...+|++...++-+- .++..+++++..|+.++.++.. ..+.+...
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 141 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEV---------- 141 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHH----------
Confidence 589999988777765544 6778999988876653 3345588999999999988764 44555444
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
+++.+++.++..+.+...+
T Consensus 142 l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 142 AAREGVKALVYDDEFTDLL 160 (549)
T ss_pred HHhcCCcEEEECchhHHHH
Confidence 6667888888877665544
No 174
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=54.16 E-value=1.3e+02 Score=27.30 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=42.4
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 125 (409)
+.+|++| +....+-.-..+.+++...|..+..+-|...+......++..++++++++.++
T Consensus 54 ~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 54 LKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred CCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 3667766 55555666677777888899866655454444455778899999999998753
No 175
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=54.09 E-value=1.2e+02 Score=33.97 Aligned_cols=97 Identities=6% Similarity=-0.028 Sum_probs=67.7
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHH-H
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV-A 83 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~-~ 83 (409)
.|+.+|++. ++-.+|.+.+.+........ .++.++|++....+-+.+.- .
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~~~~fd~~~~ 655 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNH--------------------YPLTADDVVLQKTPCSFDVSVW 655 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHh--------------------cCCCCCCEEEEeCCcchhhhHH
Confidence 355666654 23467887776655444332 47889999999888775543 3
Q ss_pred HHHHHHhhCcEEEeCCC--CCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 84 GVLGTWFSGCIAVPLAL--SYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 84 ~~~A~~~~G~~~~~i~~--~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
-+++.+..|+..+..++ ..+++.+...+++.++.++...+..+..+.
T Consensus 656 ~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~ 704 (1296)
T PRK10252 656 EFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFV 704 (1296)
T ss_pred HHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 45677788998887654 446778888999999999988887665443
No 176
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=53.96 E-value=1.3e+02 Score=33.05 Aligned_cols=98 Identities=12% Similarity=0.038 Sum_probs=68.7
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~ 82 (409)
.+|.+|++. ++-.+|.+.+...+...... .++.++|++...+|-. ..+.
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~~ 839 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV--------------------FNLRNDDVILSSLPFFHSFGLT 839 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh--------------------cCCCCCCEEEEcCcHHHHHhHH
Confidence 456677664 23478888887766655433 3667889887766632 3333
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
...++.+..|+.++..+...+.+.+...+++.++.++...+.....+.+
T Consensus 840 ~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 840 VTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred HHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 4456777888888777666678888899999999999999887765543
No 177
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=53.90 E-value=1.4e+02 Score=27.16 Aligned_cols=58 Identities=14% Similarity=0.049 Sum_probs=41.8
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
.+|+.| +....+-.-..+.+++...|..+..+-|...+......++..++++++++.+
T Consensus 56 ~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 56 KPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred CCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 667765 4566666677777888889986665555444455667889999999999864
No 178
>PRK07476 eutB threonine dehydratase; Provisional
Probab=53.52 E-value=1.2e+02 Score=27.95 Aligned_cols=54 Identities=7% Similarity=-0.077 Sum_probs=38.5
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
+....+-.-..+.+++...|..+..+-|...+......++..++++++++..+.
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 344556667777788888998665554544555567778999999999987543
No 179
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=53.49 E-value=1.2e+02 Score=30.46 Aligned_cols=85 Identities=7% Similarity=-0.103 Sum_probs=59.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|...+...+..+...+ ++.++|++....|-... +...+++.+..|+..+.. +..
T Consensus 217 V~~sh~~l~~~~~~~~~~~--------------------~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~ 275 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGLL--------------------RLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALR-RKF 275 (600)
T ss_pred EEEeHHHHHHHHHHHHHhc--------------------CCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEc-CCC
Confidence 4788888887777655442 77889999888875432 333455566667766654 456
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+...+-..+++.++.++...+.....+.
T Consensus 276 ~~~~~~~~i~~~~~t~~~~~p~l~~~l~ 303 (600)
T PRK08279 276 SASRFWDDVRRYRATAFQYIGELCRYLL 303 (600)
T ss_pred CHHHHHHHHHHhcceEEeehHHHHHHHH
Confidence 7777778889999999888776655443
No 180
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=52.65 E-value=14 Score=26.59 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=28.6
Q ss_pred CeEEEEeeCCCCCCC--------C-ccceEEEeCcchh------hhhcCCCcccchh
Q 015313 363 GVQVKIAEDESGSDA--------A-GVGEICVKSPSLF------KEYWKLPKESRTL 404 (409)
Q Consensus 363 ~~~~~ivd~~~~~~~--------~-~~Gel~v~g~~~~------~gY~~~~~~t~~~ 404 (409)
+-.+|+.|.++.+++ . +...||||-|.+. .=||+|+.++...
T Consensus 3 g~DIRf~d~~~~~L~ywIE~wd~~~~~A~iWVkvp~i~~~~~~i~lyyGn~~a~~~s 59 (89)
T PF10102_consen 3 GSDIRFYDSDGTPLPYWIESWDPTNEQALIWVKVPSIPAGSTTIYLYYGNPSATSAS 59 (89)
T ss_pred CccEEEEeCCCCEeEEEEEECCCCCCeEEEEEECCCCCCCCcEEEEEECCCCCccCC
Confidence 446777777776542 2 2688999988654 2299988877654
No 181
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=52.61 E-value=16 Score=36.65 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=24.8
Q ss_pred CCCcEEEEecCCCCC-CCceeeechHHHHH
Q 015313 169 GEDPALIVYTSGTTG-KPKGVVHTHKSIDA 197 (409)
Q Consensus 169 ~~~~~~i~~TSGtTG-~pK~v~~t~~~l~~ 197 (409)
++.+.++..|||||| .+|-+++|...+-.
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 117 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELDR 117 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHHH
Confidence 567889999999995 89999999887644
No 182
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=52.50 E-value=55 Score=30.67 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=66.2
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC-----CCChHHHHHHHhcCCceEEEech-----hHHHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLSTE-----DYREVLQNV 132 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~-----~~~~~~~~~~l~~~~~~~vi~~~-----~~~~~~~~~ 132 (409)
+|+++||.|++- ...+....-|+..+|+.++.++. ..+++.+...++.-. +.|+... ...+.+..+
T Consensus 60 l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h~~G~~~d~~~i~~~ 135 (363)
T PF01041_consen 60 LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVHLFGNPADMDAIRAI 135 (363)
T ss_dssp TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-GGGB---HHHHHHH
T ss_pred cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEecCCCCcccHHHHHHH
Confidence 588999988875 34467777899999999998764 457778888776544 5555432 234555555
Q ss_pred hhccCCceeccCCCCCCCCCccccccchhhhccCCCCCCcEEEEecCC---CCCCCceeeechHHHHHHHHHHHh
Q 015313 133 ASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSG---TTGKPKGVVHTHKSIDAQVQMLTE 204 (409)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG---tTG~pK~v~~t~~~l~~~~~~~~~ 204 (409)
.++.+...+. +--... ...... .......|.+...|-.+ +||.-=.|+.....+...++.+.+
T Consensus 136 ~~~~~i~lIe--D~a~a~-g~~~~g------~~~G~~gd~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~ 201 (363)
T PF01041_consen 136 ARKHGIPLIE--DAAQAF-GARYKG------RPVGSFGDIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRN 201 (363)
T ss_dssp HHHTT-EEEE--E-TTTT-T-EETT------EETTSSSSEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTB
T ss_pred HHHcCCcEEE--cccccc-CceeCC------EeccCCCCceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhc
Confidence 5554433322 100000 011110 11122345555555333 445544555566677777766544
No 183
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=52.40 E-value=1.4e+02 Score=25.12 Aligned_cols=93 Identities=12% Similarity=0.070 Sum_probs=51.1
Q ss_pred CeEEEecCc--hhHHHHHHHHHHHHhcCCEEEEc-cCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhh
Q 015313 212 DQFLHCLPL--HHVHGLFNALLAPLYAGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (409)
Q Consensus 212 d~~l~~~pl--~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~ 288 (409)
.+++..++- .|..|.......--..|..++.. ...+++++.+. +++++++.+..+-.+...+... .
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~----------~~~~~pd~v~lS~~~~~~~~~~-~ 153 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEK----------VKKEKPLMLTGSALMTTTMYGQ-K 153 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHH----------HHHcCCCEEEEccccccCHHHH-H
Confidence 355555554 47777644333334578877755 45678888888 6778888887654433322221 0
Q ss_pred hhhHHHHHHhhhhh-ccceEEEeeCCCCCHHH
Q 015313 289 AMDTELQAASASAA-KQLRLMMCGSSALPLPV 319 (409)
Q Consensus 289 ~~~~~~~~~~~~~~-~~lr~v~~gG~~~~~~~ 319 (409)
.. ....+...+ +.+ .+++||.+++++.
T Consensus 154 ~~---i~~l~~~~~~~~v-~i~vGG~~~~~~~ 181 (197)
T TIGR02370 154 DI---NDKLKEEGYRDSV-KFMVGGAPVTQDW 181 (197)
T ss_pred HH---HHHHHHcCCCCCC-EEEEEChhcCHHH
Confidence 00 011111111 123 4778998887654
No 184
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=52.27 E-value=12 Score=23.02 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.4
Q ss_pred eEEEeeCCCCCHHHHHHHHHHhCCcc
Q 015313 306 RLMMCGSSALPLPVMQQWETITGHRL 331 (409)
Q Consensus 306 r~v~~gG~~~~~~~~~~~~~~~~~~v 331 (409)
+++-++|.|++.+....++..||.++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 67888999999999999998887654
No 185
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=52.26 E-value=1.7e+02 Score=29.02 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=72.0
Q ss_pred CCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHHH
Q 015313 15 RDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVA 83 (409)
Q Consensus 15 ~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~~ 83 (409)
++.+|++. ++..+|++.+...+..+...+.. .+.+.|++...+|-. .-+..
T Consensus 170 ~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~------------------~~~~~d~~l~~lPl~H~~Gl~~ 231 (534)
T COG0318 170 PDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG------------------GLTPDDVVLSWLPLFHIFGLIV 231 (534)
T ss_pred CCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc------------------cCCCCceEEEecChHHHHHHHH
Confidence 66677764 23588999999988877777742 267888878787733 55556
Q ss_pred HHHHHHhhCcEEEeCCC-CCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 84 GVLGTWFSGCIAVPLAL-SYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 84 ~~~A~~~~G~~~~~i~~-~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
.+++.+..|+..+...+ .++++.+...+++.++.++...+.....+.
T Consensus 232 ~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll 279 (534)
T COG0318 232 GLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELL 279 (534)
T ss_pred HHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHH
Confidence 67777888988887765 678888888888888888887777665543
No 186
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=52.20 E-value=49 Score=29.74 Aligned_cols=65 Identities=14% Similarity=-0.022 Sum_probs=51.3
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEe-CCCCCChHHHHHHHhcCCceEEEechhHHH
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP-LALSYPESELLHVMHDSDISMVLSTEDYRE 127 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~-i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 127 (409)
..+++||.|+=...||.---+...-|...|.-.+- +...-.-+++...|+..+++.||++++..+
T Consensus 156 v~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 156 VQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred HhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 47799999999999997666666667777775444 444556778999999999999999997654
No 187
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=52.01 E-value=7.3 Score=39.12 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=25.4
Q ss_pred CCCCCcEEEEecCCCC-CCCceeeechHHHH
Q 015313 167 QRGEDPALIVYTSGTT-GKPKGVVHTHKSID 196 (409)
Q Consensus 167 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~ 196 (409)
..++.+.+...||||| |.+|-+++|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 3467788999999999 89999999996654
No 188
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=51.26 E-value=1.6e+02 Score=29.09 Aligned_cols=96 Identities=11% Similarity=0.092 Sum_probs=65.0
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHH--
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV-- 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~-- 82 (409)
.++.+|++. ++..+|.+.+......... . +++.++|++....|..-.+-
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~P~~h~~~~~ 240 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-----------------CWLTQQTRYLCALPAAHNYPLS 240 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---h-----------------cCCCcCCEEEECCChHhhhhhh
Confidence 345666654 2347788887766554333 2 47788999888877543322
Q ss_pred H-HHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 83 A-GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 83 ~-~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
. ..++++..|+..+..+ ...+..+-..+++.++.++...+..+..+.
T Consensus 241 ~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 241 SPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred HHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 2 3577788888876654 446677778899999999999988776543
No 189
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=50.98 E-value=1.6e+02 Score=30.13 Aligned_cols=78 Identities=15% Similarity=0.094 Sum_probs=59.6
Q ss_pred eeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc-CcchHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~~~~~~~~~~ 263 (409)
..+|++.+...+..+... .+..++|++...+|..--. +..+++++..|+..+... .+..+.+...
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~--------- 159 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLFDGYSVKSLIDR--------- 159 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCCCCHHHHHHH---------
Confidence 578999998877776654 4788999999999987543 345888999999887775 4677777776
Q ss_pred CCccccceeeecch
Q 015313 264 NRAGEAITAFTGVP 277 (409)
Q Consensus 264 ~i~~~~vt~~~~~P 277 (409)
++..+++.+++..
T Consensus 160 -l~~~~~~~li~~~ 172 (647)
T PTZ00237 160 -IETITPKLIITTN 172 (647)
T ss_pred -HHhcCCCEEEEcc
Confidence 5566888887764
No 190
>PLN02654 acetate-CoA ligase
Probab=50.79 E-value=1.4e+02 Score=30.64 Aligned_cols=97 Identities=19% Similarity=0.101 Sum_probs=66.6
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++.... ..| ....+|++.|...+..+... .+.+++|++...+|..--. +..+++++..|+..+.++
T Consensus 102 ~~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 102 NGDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 456666653221 111 23568999998877776554 4788999999999886533 456889999999988775
Q ss_pred -CcchHHHHHHHHhhcCCCCCCccccceeeecchHH
Q 015313 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (409)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~ 279 (409)
.+..+.+... ++..++..+++....
T Consensus 177 ~~~~~~~l~~~----------l~~~~~~~li~~~~~ 202 (666)
T PLN02654 177 AGFSAESLAQR----------IVDCKPKVVITCNAV 202 (666)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEcCcc
Confidence 4666776666 555678888776543
No 191
>PLN03102 acyl-activating enzyme; Provisional
Probab=50.72 E-value=1e+02 Score=30.99 Aligned_cols=82 Identities=12% Similarity=0.013 Sum_probs=60.6
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+...+ ++..+|++...+|-.- .++..+++++..|++++.++. .+.+.+...
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~---------- 106 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAI---------- 106 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHH----------
Confidence 589999988877776544 6888999999888654 334457889999999998875 455555555
Q ss_pred CccccceeeecchHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTR 282 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~ 282 (409)
++..+++.++..+.....
T Consensus 107 l~~~~~~~ii~~~~~~~~ 124 (579)
T PLN03102 107 LRHAKPKILFVDRSFEPL 124 (579)
T ss_pred HhccCCeEEEEChhhHHH
Confidence 677788888877655443
No 192
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=50.05 E-value=1.6e+02 Score=28.74 Aligned_cols=66 Identities=9% Similarity=-0.007 Sum_probs=49.7
Q ss_pred ccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHH
Q 015313 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
.+++++|++....+-... +...+++.+..|+.++..+...+...+...+++.++.+++..+..+..
T Consensus 198 ~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 198 LGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred cCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 478889988877775433 333456677788888777666678888889999999999998875543
No 193
>PRK05857 acyl-CoA synthetase; Validated
Probab=49.58 E-value=1.2e+02 Score=29.97 Aligned_cols=92 Identities=16% Similarity=0.044 Sum_probs=60.9
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++.. .| ...+|++.+...+..+...+ +..++|++...++.+.-. +..+++++..|+..+.++
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecC
Confidence 4566665432 22 14689999988777766544 677889998888776543 345889999999999887
Q ss_pred C-cchHHHHHHHHhhcCCCCCCccccceeeecchH
Q 015313 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (409)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (409)
. .+.+.+... ++..++..++..+.
T Consensus 98 ~~~~~~~l~~~----------~~~~~~~~ii~~~~ 122 (540)
T PRK05857 98 GNLPIAAIERF----------CQITDPAAALVAPG 122 (540)
T ss_pred ccCCHHHHHHH----------HHhcCCceEEEecc
Confidence 5 344554444 44455666655543
No 194
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=49.13 E-value=1.5e+02 Score=29.41 Aligned_cols=86 Identities=9% Similarity=0.059 Sum_probs=61.1
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHH---HHHHHHHhhCcEEEeCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV---AGVLGTWFSGCIAVPLALS 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~---~~~~A~~~~G~~~~~i~~~ 101 (409)
-.+|.+.+...+...... +++.++|++...+|-.-.+- ...++++..|+.++....
T Consensus 200 V~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~- 258 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVEI--------------------CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPD- 258 (536)
T ss_pred EEEehHHHHHHHHHHHHh--------------------cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCC-
Confidence 478888887776654433 37788998888877543222 246778888998876543
Q ss_pred CChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 102 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.+...+...+++.++.++...+..+..+..
T Consensus 259 ~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 259 PSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred CCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 456667788999999999998877665543
No 195
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.71 E-value=1.4e+02 Score=29.60 Aligned_cols=68 Identities=7% Similarity=-0.071 Sum_probs=50.3
Q ss_pred ccCCCCCEEEEEeCCCHH-HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~-~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
.++.++|++..+.|-.-. .....++++..|+.++...+...++.+..++++.++..+...+..+..+.
T Consensus 214 ~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~ 282 (539)
T PRK07008 214 MGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLL 282 (539)
T ss_pred cCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHH
Confidence 578889988877764321 22234667788988776666778888999999999999998887766544
No 196
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=48.30 E-value=1.4e+02 Score=23.73 Aligned_cols=76 Identities=13% Similarity=0.061 Sum_probs=48.4
Q ss_pred cCCCCCEEEEEeC-CCHHH-HHHHHHHHhhCcEEEeCCCCC-------ChHHHHHHHhcCCceEEEechhHHHHHHHHhh
Q 015313 64 AGGCGARIGIVAK-PSFEF-VAGVLGTWFSGCIAVPLALSY-------PESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (409)
Q Consensus 64 g~~~g~~V~l~~~-~~~~~-~~~~~A~~~~G~~~~~i~~~~-------~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (409)
..-+|..|+++.. +|-.. .....|+.++|+.++.+++.. +..+...++... ++++++-......+..+..
T Consensus 35 ~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~D~iv~R~~~~~~~~~~a~ 113 (142)
T PF02729_consen 35 QLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-VDAIVIRHPSHGALEELAE 113 (142)
T ss_dssp TTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-CSEEEEEESSHHHHHHHHH
T ss_pred ccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-hheEEEEeccchHHHHHHH
Confidence 4556776666655 66444 445577899999999887533 344677788888 7888876555555555555
Q ss_pred ccCCce
Q 015313 135 KSGAKF 140 (409)
Q Consensus 135 ~~~~~~ 140 (409)
.....+
T Consensus 114 ~~~vPV 119 (142)
T PF02729_consen 114 HSSVPV 119 (142)
T ss_dssp HCSSEE
T ss_pred hccCCe
Confidence 544433
No 197
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=48.21 E-value=2.5e+02 Score=29.05 Aligned_cols=86 Identities=12% Similarity=0.011 Sum_probs=62.8
Q ss_pred eeechHHHHHHHHHHHh---hcccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~ 263 (409)
..+|++.+...+..+.. ..+..++|++...++-..-. +...++++..|+..+.+.. ...+.+...
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 173 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYASLGEEALCHS--------- 173 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 45799988887777655 34788899988888765432 3457888999999997765 455665555
Q ss_pred CCccccceeeecchHHHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRLIQ 285 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l~~ 285 (409)
+...+++.+++.+..+..+.+
T Consensus 174 -l~~s~~~~li~~~~~~~~l~~ 194 (696)
T PLN02387 174 -LNETEVTTVICDSKQLKKLID 194 (696)
T ss_pred -HHccCCCEEEECHHHHHHHHH
Confidence 666789999988877766654
No 198
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=47.83 E-value=1.7e+02 Score=26.80 Aligned_cols=58 Identities=5% Similarity=-0.112 Sum_probs=37.2
Q ss_pred CCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 68 g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
++.|... ..+-.-..+.+++...|..+..+-|...+......++..++++++++.++.
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~ 127 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFD 127 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcHH
Confidence 3444433 344455556678888887655543433345556778899999999987543
No 199
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=47.79 E-value=91 Score=31.08 Aligned_cols=88 Identities=15% Similarity=0.077 Sum_probs=69.1
Q ss_pred eeeechHHHHHHHHHHHhhcc-----cCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcC
Q 015313 187 GVVHTHKSIDAQVQMLTEAWE-----YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYP 260 (409)
Q Consensus 187 ~v~~t~~~l~~~~~~~~~~~~-----~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~ 260 (409)
+..+|++.+...+..+...+. .+.+|++....|-...+.. ..++++..|+.+.-... ++...+...
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~------ 114 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQ------ 114 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHH------
Confidence 779999999988877766553 6789999999998865544 36788999999888775 456666665
Q ss_pred CCCCCccccceeeecchHHHHHHHHh
Q 015313 261 VNGNRAGEAITAFTGVPTMYTRLIQG 286 (409)
Q Consensus 261 ~~~~i~~~~vt~~~~~P~~l~~l~~~ 286 (409)
++.-++++++.....+..+.+.
T Consensus 115 ----~~~s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 115 ----LKDSKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred ----HHhcCCeEEEEcCchHHHHHHH
Confidence 6667999999999999888654
No 200
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=47.09 E-value=2e+02 Score=29.10 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=66.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++.... .+| ..-.+|++.+...+..+... .+..++|++...+|.+--. +..+++++..|+..+.++
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 456677664322 122 24578999998777766554 4788999999998876433 445888999999988775
Q ss_pred -CcchHHHHHHHHhhcCCCCCCccccceeeecchH
Q 015313 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (409)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (409)
.+..+.+... ++..+++.+++...
T Consensus 145 ~~~~~~~l~~~----------l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADR----------INDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHH----------HHhcCCCEEEEcCc
Confidence 4566666666 55567787777654
No 201
>PRK07514 malonyl-CoA synthase; Validated
Probab=47.04 E-value=1.4e+02 Score=29.13 Aligned_cols=84 Identities=15% Similarity=0.066 Sum_probs=59.9
Q ss_pred eeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
..+|+..+...+..+... .+...+|++....+-.. ..+..+++++..|+..+..+.. +...+...
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~--------- 95 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYF--------- 95 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHH---------
Confidence 478889888776666544 46788999988888763 3345688999999999988754 44545444
Q ss_pred CCccccceeeecchHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l 283 (409)
++..+++.++..+.....+
T Consensus 96 -l~~~~~~~ii~~~~~~~~~ 114 (504)
T PRK07514 96 -IGDAEPALVVCDPANFAWL 114 (504)
T ss_pred -HHhCCCcEEEEccchhHHH
Confidence 5667888888777666544
No 202
>PLN02614 long-chain acyl-CoA synthetase
Probab=46.71 E-value=3.3e+02 Score=28.05 Aligned_cols=84 Identities=8% Similarity=-0.136 Sum_probs=60.3
Q ss_pred eeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
..+|++.+...+..+... .+..++|++...++-+.-. +...++++..|+..+.+... ..+.+...
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~i--------- 146 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVPLYDTLGAGAVEFI--------- 146 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEEecCCCCHHHHHHH---------
Confidence 357899888777766544 4788899999888876533 34578899999999988764 45555444
Q ss_pred CCccccceeeecchHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l 283 (409)
++..+++.+++....+..+
T Consensus 147 -l~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 147 -ISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred -HhccCCCEEEECHHHHHHH
Confidence 6667888888877655444
No 203
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=46.69 E-value=69 Score=30.24 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=35.9
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC-----CChHHHHHHHhcCCceEEEec
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLST 122 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~-----~~~~~~~~~l~~~~~~~vi~~ 122 (409)
+++++||.|++-.+ .|.....++...|+.+++++.+ .+.+.+...++. +.++|+..
T Consensus 66 l~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 66 LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred cCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 47899999887544 3445556667889887776543 345566665543 55666643
No 204
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.32 E-value=1.9e+02 Score=29.02 Aligned_cols=68 Identities=13% Similarity=0.014 Sum_probs=49.7
Q ss_pred ccCCCCCEEEEEeCCCHHH-HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~-~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
.++..++++...+|-.-.+ ....++.+..|+..+......++..+...+++.++.+++..+.....+.
T Consensus 219 ~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 287 (576)
T PRK05620 219 LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLM 287 (576)
T ss_pred cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHH
Confidence 4778899998887754332 2344667778887776666678888999999999999998877665443
No 205
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=46.24 E-value=1.9e+02 Score=29.42 Aligned_cols=96 Identities=18% Similarity=0.147 Sum_probs=66.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++.... . ......+|++.+...+..+...+ +..++|++...+|-.--. +..+++++..|+..+.++
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 467777664321 1 11345789999998777766544 678899999988876543 345888999999998876
Q ss_pred C-cchHHHHHHHHhhcCCCCCCccccceeeecchH
Q 015313 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (409)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (409)
. +....+... ++..+++.+++...
T Consensus 155 ~~~~~~~l~~~----------l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADR----------IIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHH----------HHhcCCcEEEEcCc
Confidence 5 456666555 55567777776554
No 206
>PRK13388 acyl-CoA synthetase; Provisional
Probab=46.12 E-value=2e+02 Score=28.47 Aligned_cols=82 Identities=9% Similarity=-0.126 Sum_probs=57.3
Q ss_pred eechHHHHHHHHHHHhhc---cc-CCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EY-TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~-~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
.+|+..+...+..+...+ +. .++|++...++-+.-. +..+++++..|+.++.++.. ..+.+...
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~--------- 94 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLNTTRRGAALAAD--------- 94 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEecccCChHHHHHH---------
Confidence 689999988777766544 56 5788888888765433 34588899999999987753 44555444
Q ss_pred CCccccceeeecchHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTR 282 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~ 282 (409)
+.+.+++.++........
T Consensus 95 -l~~~~~~~~i~~~~~~~~ 112 (540)
T PRK13388 95 -IRRADCQLLVTDAEHRPL 112 (540)
T ss_pred -HHhcCCCEEEEChhhhHH
Confidence 566777777776655443
No 207
>PRK05852 acyl-CoA synthetase; Validated
Probab=45.97 E-value=2.5e+02 Score=27.75 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=61.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHHHHHHHHHhhCcEEEe-CCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVP-LALS 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~~~~~A~~~~G~~~~~-i~~~ 101 (409)
-.+|+..+...+..+...+ +++++|++....|... .++..+++++..|...+. -...
T Consensus 194 v~~~~~~~~~~~~~~~~~~--------------------~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 253 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY--------------------RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGR 253 (534)
T ss_pred EEecHHHHHHHHHHHHHHh--------------------CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcC
Confidence 4678888876666555433 6788998888777543 344557777777776443 3345
Q ss_pred CChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 102 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.++..+-..+++.++..++..+..+..+..
T Consensus 254 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 283 (534)
T PRK05852 254 FSAHTFWDDIKAVGATWYTAVPTIHQILLE 283 (534)
T ss_pred cCHHHHHHHHHHcCCcEEEcChHHHHHHHh
Confidence 667778888999999999999887766554
No 208
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=45.92 E-value=2e+02 Score=24.97 Aligned_cols=59 Identities=14% Similarity=-0.041 Sum_probs=41.0
Q ss_pred CCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 67 ~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
+++.|+ ....+-.-..+.++|...|..+..+-|...+......++..+++++.++.++.
T Consensus 49 ~~~~vv-~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 49 PKGVII-ESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFD 107 (244)
T ss_pred CCCEEE-EeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 345444 44445666777777888898666665554566677788999999999987643
No 209
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=45.80 E-value=2.1e+02 Score=29.30 Aligned_cols=69 Identities=10% Similarity=0.075 Sum_probs=50.3
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC---CCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL---SYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~---~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.+++++|++....+.+.......++.+..|+..+..+. ..++..+-.++++.++.++.+.+.....+..
T Consensus 300 ~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 371 (655)
T PRK03584 300 CDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEK 371 (655)
T ss_pred cCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHh
Confidence 37788998877666554433446788889998877642 2356778888999999999988877766543
No 210
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=45.52 E-value=1.5e+02 Score=29.48 Aligned_cols=82 Identities=12% Similarity=-0.010 Sum_probs=56.4
Q ss_pred eeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
..+|++.+...+..+...+ +..++|++...++-..-. +..+++++..|+..+.++.. ....+...
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~--------- 122 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGANPTALESEIKKQ--------- 122 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccCCccCCHHHHHHH---------
Confidence 3689999988777765544 677889998887776543 34578899999998877654 34444444
Q ss_pred CCccccceeeecchHHHH
Q 015313 264 NRAGEAITAFTGVPTMYT 281 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~ 281 (409)
++..++..++..+..+.
T Consensus 123 -l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 123 -AEAAGAKLIVTNDTNYG 139 (546)
T ss_pred -HHhcCCeEEEEccchhh
Confidence 55566777766555444
No 211
>PRK06381 threonine synthase; Validated
Probab=45.27 E-value=1.3e+02 Score=27.63 Aligned_cols=56 Identities=11% Similarity=-0.079 Sum_probs=39.9
Q ss_pred EEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 71 V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
..+.....-.-+.+.++|...|..+..+-|...+......++..++++++++.++.
T Consensus 65 ~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 65 GITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYE 120 (319)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHH
Confidence 34456667777788888889998666554443444555688999999999987644
No 212
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=45.00 E-value=1.6e+02 Score=26.47 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=42.0
Q ss_pred CCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH
Q 015313 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (409)
Q Consensus 67 ~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 125 (409)
+|+.|+ ....+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 52 ~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 52 PGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 456554 4666777778888888999866655454444556678899999999998754
No 213
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=44.55 E-value=62 Score=25.46 Aligned_cols=32 Identities=9% Similarity=-0.036 Sum_probs=25.6
Q ss_pred ccCCCCCEEEEEeCC---CHHHHHHHHHHHhhCcE
Q 015313 63 LAGGCGARIGIVAKP---SFEFVAGVLGTWFSGCI 94 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~---~~~~~~~~~A~~~~G~~ 94 (409)
+|+.+++.|++++.. ......+++++..+|..
T Consensus 90 ~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 90 KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 589999999999975 56666777888888864
No 214
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=44.01 E-value=31 Score=23.49 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEE
Q 015313 34 SSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74 (409)
Q Consensus 34 ~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~ 74 (409)
+...++++.|++.|+- .-...+|++.||.|.|.
T Consensus 31 e~~~~f~~~L~~~Gv~--------~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 31 ENLRRFARKLKKLGVE--------DALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHHHHHHCCHH--------HHHHHcCCCCCCEEEEc
Confidence 4456667777666531 11223699999999875
No 215
>PRK07529 AMP-binding domain protein; Validated
Probab=43.90 E-value=1.8e+02 Score=29.64 Aligned_cols=97 Identities=15% Similarity=0.065 Sum_probs=62.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++....+.. ..+...+|++.+...+..+... .+..++|++...+|-+.-. +..+++++..|..+.+-+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCC
Confidence 456666665433211 1235678999998777666544 4788899999999876433 345778888885433333
Q ss_pred CcchHHHHHHHHhhcCCCCCCccccceeeecch
Q 015313 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (409)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (409)
..+++.+... +++.++..++...
T Consensus 115 ~~~~~~i~~~----------l~~~~~~~li~~~ 137 (632)
T PRK07529 115 LLEPEQIAEL----------LRAAGAKVLVTLG 137 (632)
T ss_pred cCCHHHHHHH----------HHhcCCcEEEEeC
Confidence 4566666666 5556777777753
No 216
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=43.73 E-value=2.6e+02 Score=30.90 Aligned_cols=97 Identities=10% Similarity=0.107 Sum_probs=66.1
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~ 82 (409)
.+|.+|++. ++-.+|.+++...+......+ +++++|++...+|-. ..+.
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~--------------------~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI--------------------DFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh--------------------CCCCcCEEEEecchHHHHHHH
Confidence 455666654 124688888877666655433 678899988887743 2333
Q ss_pred HHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
...+..+..|+..+..+.....+.+...+++.++.++...+.....+.
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 456667778888877665555566778889999999998887665543
No 217
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=42.95 E-value=1.5e+02 Score=33.52 Aligned_cols=85 Identities=15% Similarity=0.039 Sum_probs=56.6
Q ss_pred CCCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc
Q 015313 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (409)
Q Consensus 167 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~ 243 (409)
..++.++++...+...+......+|++.+...+..+...+ +..+++++...++-+.-. +..+++++..|+.++.+
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVI 325 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEecc
Confidence 3467777664332211111234789999998877776554 677899999888876543 45688999999999988
Q ss_pred cCcchHHHHH
Q 015313 244 PKFSVRGIWQ 253 (409)
Q Consensus 244 ~~~~~~~~~~ 253 (409)
+...+..-..
T Consensus 326 dp~~p~~~~~ 335 (1389)
T TIGR03443 326 DPAYPPARQT 335 (1389)
T ss_pred CCCCcHHHHH
Confidence 8654444333
No 218
>PRK06839 acyl-CoA synthetase; Validated
Probab=42.94 E-value=1.9e+02 Score=28.07 Aligned_cols=84 Identities=8% Similarity=-0.069 Sum_probs=61.8
Q ss_pred eeechHHHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (409)
..+|+..+...+..+...+ +..+++++...++-+.. ++..+++++..|+..+..+. .+..++...
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~-------- 95 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQ-------- 95 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHH--------
Confidence 5789999988777776543 57788988888877644 34558899999999998875 455555554
Q ss_pred CCCccccceeeecchHHHHHH
Q 015313 263 GNRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 263 ~~i~~~~vt~~~~~P~~l~~l 283 (409)
+++.+++.++..+.....+
T Consensus 96 --l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 96 --LKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred --HHhcCceEEEEcHHHHHHH
Confidence 5667889988887766554
No 219
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=42.92 E-value=2.4e+02 Score=28.90 Aligned_cols=94 Identities=24% Similarity=0.230 Sum_probs=64.6
Q ss_pred CCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC
Q 015313 169 GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (409)
Q Consensus 169 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~ 245 (409)
.++++.+.... +|. ...+|++.+...+..+...+ +..++|++...+|..--. +..+++++..|+..+....
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCC
Confidence 35566555422 222 34689999988777766544 788999999999987433 3458889999999887764
Q ss_pred -cchHHHHHHHHhhcCCCCCCccccceeeecchH
Q 015313 246 -FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (409)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~ 278 (409)
+..+.+... +++.++..+++...
T Consensus 172 ~~~~~~l~~~----------l~~~~~k~li~~~~ 195 (652)
T TIGR01217 172 DFGARGVLDR----------FQQIEPKLLFTVDG 195 (652)
T ss_pred CCCHHHHHHH----------HHhcCCcEEEEccc
Confidence 566666666 55567777776543
No 220
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=42.88 E-value=90 Score=29.40 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=35.9
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC-----CChHHHHHHHhcCCceEEEe
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLS 121 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~-----~~~~~~~~~l~~~~~~~vi~ 121 (409)
+++++||.|++-.+.. .....++...|+.++.++.+ .+.+++...+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~~t~---~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSYTF---VSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 4678999988766544 34455667789887777532 456677776654 4566654
No 221
>PRK07798 acyl-CoA synthetase; Validated
Probab=42.71 E-value=2.9e+02 Score=27.05 Aligned_cols=84 Identities=11% Similarity=-0.051 Sum_probs=57.6
Q ss_pred eeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
-.+|+..+...+..+... .+...+|++....+-.-- .+..+++++..|+..+..+.. ....+...
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~--------- 95 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE--YVEAMLGAFKARAVPVNVNYRYVEDELRYL--------- 95 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCeEEEecCcCCCHHHHHHH---------
Confidence 368888888777666544 367788888888765532 344578889999999988754 44554444
Q ss_pred CCccccceeeecchHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l 283 (409)
+++.++..++..+.....+
T Consensus 96 -l~~~~~~~~~~~~~~~~~~ 114 (533)
T PRK07798 96 -LDDSDAVALVYEREFAPRV 114 (533)
T ss_pred -HhhcCCCEEEEchhhHHHH
Confidence 5667788887776655444
No 222
>PRK13383 acyl-CoA synthetase; Provisional
Probab=42.69 E-value=1.8e+02 Score=28.64 Aligned_cols=83 Identities=10% Similarity=0.017 Sum_probs=59.9
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|...+...+..+...+ +..++|++...++-+-. .+..+++++..|+..+..+.. ..+.+...
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~v~vpl~~~~~~~~l~~~---------- 127 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG--FVTAVFAVGLLGADVVPISTEFRSDALAAA---------- 127 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEEEcCccCCHHHHHHH----------
Confidence 588888887777766544 67788998888875543 234578889999999988764 45555554
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
+++.+++.++..+...+.+
T Consensus 128 l~~~~~~~ii~~~~~~~~~ 146 (516)
T PRK13383 128 LRAHHISTVVADNEFAERI 146 (516)
T ss_pred HhcCCCCEEEEchhHHHHH
Confidence 6778888888877665544
No 223
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.38 E-value=1.7e+02 Score=29.20 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=61.0
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+......+ +...+|++....+-+.-. +..+++++..|+.++..+. .+.+.+...
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~---------- 124 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHNPLYTAHELEHP---------- 124 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCcCCCHHHHHHH----------
Confidence 479999988777765544 677899999888876543 3458889999999998765 455665555
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
+.+.+++.++..+..+..+
T Consensus 125 l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 125 FEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred HhccCCcEEEechhhHHHH
Confidence 6678888888877665544
No 224
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=42.16 E-value=83 Score=30.02 Aligned_cols=47 Identities=17% Similarity=0.124 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC-HHHHH-HHHHHHhhCc
Q 015313 32 LASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS-FEFVA-GVLGTWFSGC 93 (409)
Q Consensus 32 l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~-~~~~~-~~~A~~~~G~ 93 (409)
+..+.+++|..|.+.| +++++|+.|.|.++.. .+++- ..-.+..+|+
T Consensus 3 ~~~~l~kyA~llV~~g---------------lnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA 51 (398)
T PF02073_consen 3 FDERLEKYAELLVKYG---------------LNVQPGQKVLIRAPVEAAPLARALVEEAYEAGA 51 (398)
T ss_dssp HHHHHHHHHHHHHHTT---------------T---TT-EEEEEEETT-HHHHHHHHHHHHHTT-
T ss_pred chHHHHHHHHHHHHhc---------------cCCCCCCEEEEEecccHHHHHHHHHHHHHHcCC
Confidence 5678899999999976 4899999999999955 44443 3345666777
No 225
>PRK07787 acyl-CoA synthetase; Validated
Probab=42.08 E-value=3e+02 Score=26.63 Aligned_cols=84 Identities=11% Similarity=-0.004 Sum_probs=59.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCC--CHHHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~--~~~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|+..+...+..+...+ ++.++|++....|- ..-+....++.+..|+.++.... .
T Consensus 146 v~~t~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~ 204 (471)
T PRK07787 146 VVLSRRAIAADLDALAEAW--------------------QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR-P 204 (471)
T ss_pred EEEeHHHHHHHHHHHHHhc--------------------CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC-C
Confidence 3678888877665555433 66788887666553 23345567888899998887754 5
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
+++.+...++ .++.++...+..+..+.
T Consensus 205 ~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 205 TPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred CHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 6778888888 89998888877665443
No 226
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=41.88 E-value=2.1e+02 Score=29.39 Aligned_cols=84 Identities=11% Similarity=-0.116 Sum_probs=60.4
Q ss_pred eeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
..+|++.+...+..+... .+..++|++...++-+.-. +...++++..|+..+.+... ..+.+...
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 144 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDTLGANAVEFI--------- 144 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 468999998877776654 4688999998888876433 34578899999999888764 44555444
Q ss_pred CCccccceeeecchHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l 283 (409)
+++.+++.+++....+..+
T Consensus 145 -l~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 145 -INHAEVSIAFVQESKISSI 163 (660)
T ss_pred -HHcCCCCEEEECHHHHHHH
Confidence 6667888888876655444
No 227
>PRK05850 acyl-CoA synthetase; Validated
Probab=41.75 E-value=3.3e+02 Score=27.22 Aligned_cols=84 Identities=11% Similarity=0.036 Sum_probs=59.5
Q ss_pred eeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC----cchHHHHHHHHhhcC
Q 015313 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYP 260 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~~~~~~~ 260 (409)
..+|++.+...+..+...+ + .++|++...++.+. .++..+++++..|+.++.++. ...+.+...
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~------ 104 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAV------ 104 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHH------
Confidence 5789999887776665443 3 46788888888664 334558899999999998874 234445444
Q ss_pred CCCCCccccceeeecchHHHHHHH
Q 015313 261 VNGNRAGEAITAFTGVPTMYTRLI 284 (409)
Q Consensus 261 ~~~~i~~~~vt~~~~~P~~l~~l~ 284 (409)
++..++..++..+.....+.
T Consensus 105 ----l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 105 ----LRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred ----HHhcCCCEEEEcHHHHHHHH
Confidence 66678888888887766553
No 228
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=41.41 E-value=3.1e+02 Score=27.08 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=58.9
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH--HHHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~--~~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|.+.+...+...... .+++.+|++....|-.- .++...+..+..|+.++.. +..
T Consensus 213 v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~-~~~ 271 (538)
T TIGR03208 213 VMHTANTLFSNIHPYAER--------------------LELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ-DIW 271 (538)
T ss_pred EEeehHHHHHHHHHHHhh--------------------cCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-Ccc
Confidence 367777776655444332 36678998888887543 2445566777788876654 456
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
++..+-..+++.++.++...+..+..+.
T Consensus 272 ~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 299 (538)
T TIGR03208 272 NPARAAELIRETGVTFTMASTPFLTDLC 299 (538)
T ss_pred CHHHHHHHHHHhCCeEEecCHHHHHHHH
Confidence 7888888999999999988877665543
No 229
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=41.16 E-value=2.7e+02 Score=27.23 Aligned_cols=82 Identities=6% Similarity=-0.043 Sum_probs=59.1
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+... .+...+|++....+-+.-. ...+++++..|+.++..+. .+.+.+...
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 104 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINARLLREESAWI---------- 104 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCcccCHHHHHHH----------
Confidence 47888888777766543 4778889999988877544 3457889999999887765 455555555
Q ss_pred CccccceeeecchHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTR 282 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~ 282 (409)
+++.+++.++..+.....
T Consensus 105 l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 105 LQNSQASLLVTSAQFYPM 122 (517)
T ss_pred HHhcCceEEEEecchhHH
Confidence 666788888887765543
No 230
>PRK07867 acyl-CoA synthetase; Validated
Probab=41.12 E-value=3.2e+02 Score=26.97 Aligned_cols=84 Identities=10% Similarity=-0.003 Sum_probs=54.3
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSY 102 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~ 102 (409)
-.+|++.+...+..+... +++.++|++....+-.-. .+..+++.+..|+.++.. +..
T Consensus 170 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~-~~~ 228 (529)
T PRK07867 170 VRCTHRKVASAGVMLAQR--------------------FGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALR-RKF 228 (529)
T ss_pred EEecHHHHHHHHHHHHHh--------------------hCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEec-CCC
Confidence 477888886655544333 377888988777664322 223344455567665543 456
Q ss_pred ChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 103 PESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 103 ~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
+.+.+...+++.++.++...+.....+
T Consensus 229 ~~~~~~~~i~~~~vt~~~~~p~~~~~l 255 (529)
T PRK07867 229 SASGFLPDVRRYGATYANYVGKPLSYV 255 (529)
T ss_pred CHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 778888889999999988776655443
No 231
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=40.88 E-value=1.8e+02 Score=22.91 Aligned_cols=55 Identities=9% Similarity=0.037 Sum_probs=41.4
Q ss_pred CEEEEEeCCC----HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 69 ARIGIVAKPS----FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 69 ~~V~l~~~~~----~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
.+|.+.+... .-..+....+...|.-++.+..+.|.+++...+.+.+|++|....
T Consensus 4 ~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 4 KTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred CEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 3455554433 333444556667899999999999999999999999999998764
No 232
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=39.97 E-value=1.9e+02 Score=27.67 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=52.1
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeC--CCCCChHHHHHHHhcCCceEEE----echhHHHHHHHH
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL--ALSYPESELLHVMHDSDISMVL----STEDYREVLQNV 132 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i--~~~~~~~~~~~~l~~~~~~~vi----~~~~~~~~~~~~ 132 (409)
-+|-+|+.+..-.++..+....+..+|+-+... +|..+.+++...|...+..+.- +++++...+...
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ey~~~~~~~ 102 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEEYYWAIEQV 102 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHHHHHHHHHH
Confidence 568999999999999999999999999976655 8888888888888888888663 344454444444
No 233
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=39.41 E-value=3.6e+02 Score=28.28 Aligned_cols=117 Identities=14% Similarity=0.064 Sum_probs=75.3
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc------ccCCC-----------CeEEEecCchhHHHHHHHH
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSA-----------DQFLHCLPLHHVHGLFNAL 230 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~~~-----------d~~l~~~pl~~~~g~~~~~ 230 (409)
.++.++++....| .+ -..+|++.+...+..+...+ ++.++ |++...++-+. ..+...
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVAD 147 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHH
Confidence 3566666533222 11 24688998888777765433 56665 78888877653 223457
Q ss_pred HHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHhhhhhccceEEE
Q 015313 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (409)
Q Consensus 231 ~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~lr~v~ 309 (409)
++++..|++.+.+.. +..+.+... ++.-++.++++.+..+..+.+.. ..++.++.++
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~i----------l~~s~~~~lv~~~~~~~~l~~~~------------~~~~~l~~ii 205 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDI----------LNETKLEWLCLDLDLVEGLLERK------------NELPHLKKLI 205 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHH----------HhcCCCCEEEEcHHHHHHHHHhh------------ccCCCceEEE
Confidence 888999998888765 556666665 66678999998877776665431 1245677776
Q ss_pred eeC
Q 015313 310 CGS 312 (409)
Q Consensus 310 ~gG 312 (409)
+-+
T Consensus 206 ~~~ 208 (746)
T PTZ00342 206 ILD 208 (746)
T ss_pred EEC
Confidence 654
No 234
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=39.31 E-value=2.6e+02 Score=27.68 Aligned_cols=67 Identities=9% Similarity=0.064 Sum_probs=49.7
Q ss_pred ccCCCCCEEEEEeCCCHH-HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~-~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
.++++++++...+|-... .+...++.+..|+.+++.+ ..+++.+...+++.++.++...+.....+.
T Consensus 216 ~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 283 (542)
T PRK06155 216 LEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILL 283 (542)
T ss_pred cCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHH
Confidence 377889999888875322 2334578888898877665 457888888999999999998887665543
No 235
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=39.28 E-value=2.7e+02 Score=27.76 Aligned_cols=97 Identities=19% Similarity=0.144 Sum_probs=69.3
Q ss_pred CcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc-cC
Q 015313 171 DPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM-PK 245 (409)
Q Consensus 171 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~-~~ 245 (409)
+-..++|.+-.++. -.+|++.|......+.+.+ +. ++|++..++|..--. +..++++.-.|+..... +.
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~~ 98 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA--VIALLATARIGAIPAVVSPG 98 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEeecccC
Confidence 34455555544443 6789999988777776655 34 899999999997654 44588889899766655 56
Q ss_pred cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHH
Q 015313 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l 283 (409)
+.++.+... +..-++..+++....++..
T Consensus 99 f~~~al~~R----------i~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 99 LSAEAVADR----------IADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CCHHHHHHH----------HHccCCCEEEEeccccccc
Confidence 888888777 5556888888777776644
No 236
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=39.24 E-value=2.6e+02 Score=27.57 Aligned_cols=84 Identities=11% Similarity=-0.076 Sum_probs=54.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCC-CCCEEEEEeCCCHH-HHHHHHHHHhhCcEEEeCCC--
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGG-CGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLAL-- 100 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~-~g~~V~l~~~~~~~-~~~~~~A~~~~G~~~~~i~~-- 100 (409)
-.+|++.+...+..+...+ ++. ++|++....|-.-. .+..+++.+..|+.++..+.
T Consensus 170 V~~th~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~ 229 (525)
T PRK05851 170 AILSPGAVLSNLRGLNARV--------------------GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTA 229 (525)
T ss_pred EEecHHHHHHHHHHHHHHh--------------------CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHH
Confidence 4788888887766655443 666 78888877775422 22345677788888777653
Q ss_pred -CCChHHHHHHHhcCCceEEEechhHHHH
Q 015313 101 -SYPESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 101 -~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
...+..+...+++.++.++.+..-....
T Consensus 230 ~~~~~~~~~~~i~~~~~t~~~~p~~~~~~ 258 (525)
T PRK05851 230 FSASPFRWLSWLSDSRATLTAAPNFAYNL 258 (525)
T ss_pred HHHCHHHHHHHHHHhCCeEEeCCcHHHHH
Confidence 1245567778888888877554433333
No 237
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=38.68 E-value=2.2e+02 Score=27.90 Aligned_cols=85 Identities=9% Similarity=0.019 Sum_probs=60.4
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+... .+..+++++....|-..-. +..+++++..|+..+.++.. ....+...
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~~~~~---------- 78 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAF--FEAAYAAMRLGAYAVPVNWHFKPEEIAYI---------- 78 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCcccCHHHHHHH----------
Confidence 57888887766665543 4678899999888876543 34578889999999988754 44555444
Q ss_pred CccccceeeecchHHHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRLIQ 285 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l~~ 285 (409)
++..+++.++........+..
T Consensus 79 l~~~~~~~i~~~~~~~~~~~~ 99 (509)
T PRK12406 79 LEDSGARVLIAHADLLHGLAS 99 (509)
T ss_pred HhccCCcEEEEccchhhhhhh
Confidence 677888888887766665543
No 238
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=38.50 E-value=2e+02 Score=22.68 Aligned_cols=55 Identities=16% Similarity=-0.080 Sum_probs=35.2
Q ss_pred eEEEecCc-hhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCCCccccceeeecch
Q 015313 213 QFLHCLPL-HHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (409)
Q Consensus 213 ~~l~~~pl-~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (409)
+++.+.+- .|..|........-..|..++.... .+++++.+. +.++++..+..+-
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~----------a~~~~~d~V~lS~ 62 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDA----------AIETDADAILVSS 62 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH----------HHHcCCCEEEEcC
Confidence 33434443 3777764433444468888777764 567888888 6668888876654
No 239
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.33 E-value=2.2e+02 Score=27.81 Aligned_cols=83 Identities=12% Similarity=0.022 Sum_probs=58.9
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+... .+.+.+|++....+-+.-. +..+++++..|+..+..+.. ....+...
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~---------- 78 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYI---------- 78 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHH----------
Confidence 57888887766666544 4678899999888876443 33588899999999988753 44444444
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
+++.+++.++..+.....+
T Consensus 79 ~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 79 VDDSGAKVLIVSAALADTA 97 (502)
T ss_pred HhcCCCCEEEEccchhhHH
Confidence 6667888888877666544
No 240
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=38.26 E-value=1.1e+02 Score=28.27 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=43.8
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
.++++|++|+|+.--..-.+...+|-.+ |+-++.++.+ ++.....++.+++.++...
T Consensus 162 ~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 162 ANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 5899999999999988888888877644 4777777655 3344556788999998865
No 241
>PLN02574 4-coumarate--CoA ligase-like
Probab=38.23 E-value=3.6e+02 Score=26.84 Aligned_cols=90 Identities=13% Similarity=0.119 Sum_probs=57.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHH---HHHHHHHHHhhCcEEEeCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE---FVAGVLGTWFSGCIAVPLALS 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~---~~~~~~A~~~~G~~~~~i~~~ 101 (409)
-.+|++.+...+..+....... .+...++.+.+..-+-.. +...+++.+..|+.++..+ .
T Consensus 216 V~~sh~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~ 278 (560)
T PLN02574 216 VVLTHRNLIAMVELFVRFEASQ----------------YEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR-R 278 (560)
T ss_pred EEEeHHHHHHHHHHHHhccccc----------------cccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec-C
Confidence 4789988887776665443332 233333444433322222 2233456667798877665 4
Q ss_pred CChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 102 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.+.+.+...+++.++.++...+..+..+.+
T Consensus 279 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 308 (560)
T PLN02574 279 FDASDMVKVIDRFKVTHFPVVPPILMALTK 308 (560)
T ss_pred CCHHHHHHHHHHcCCeEEecCCHHHHHHHh
Confidence 578889999999999999998877765543
No 242
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=37.48 E-value=2.3e+02 Score=28.19 Aligned_cols=82 Identities=16% Similarity=0.054 Sum_probs=58.6
Q ss_pred eeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
..+|+.++...+..+...+ +...+|++...++-+.-. +..+++++..|+..+..+.. ....+...
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~v~~~~~~~~~~~~--------- 115 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY--PVAIAAVLRAGYVVVNVNPLYTPRELEHQ--------- 115 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCeEEeccCcccCHHHHHHH---------
Confidence 3689999988777765543 678899998888776543 34578899999999987654 45555444
Q ss_pred CCccccceeeecchHHHH
Q 015313 264 NRAGEAITAFTGVPTMYT 281 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~ 281 (409)
+++.+++.++....+..
T Consensus 116 -~~~~~~~~vi~~~~~~~ 132 (557)
T PRK07059 116 -LKDSGAEAIVVLENFAT 132 (557)
T ss_pred -HHccCceEEEEchhhHH
Confidence 66678888887665543
No 243
>PRK06060 acyl-CoA synthetase; Validated
Probab=37.23 E-value=2.1e+02 Score=29.56 Aligned_cols=80 Identities=21% Similarity=0.123 Sum_probs=55.9
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcc-hHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS-VRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+... .+...++++...++-+.-. +..+++++..|+..+..+... ...+...
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~--~~~~la~~~aG~~~vpi~p~~~~~~l~~~---------- 97 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL--VQLLLACLARGVMAFLANPELHRDDHALA---------- 97 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEecCCCCCHHHHHHH----------
Confidence 48999998777766554 3678899999888876544 445889999999888877543 4444443
Q ss_pred CccccceeeecchHHH
Q 015313 265 RAGEAITAFTGVPTMY 280 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l 280 (409)
++..++..++......
T Consensus 98 l~~~~~~~vi~~~~~~ 113 (705)
T PRK06060 98 ARNTEPALVVTSDALR 113 (705)
T ss_pred HhcCCCcEEEEchHHh
Confidence 5556777776655443
No 244
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=37.11 E-value=4e+02 Score=27.19 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=67.3
Q ss_pred cCCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHH
Q 015313 13 MARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEF 81 (409)
Q Consensus 13 ~~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~ 81 (409)
..||-.|.+. ++--+||+.|...+..+...+. -++++|++.-++|-+ .|.
T Consensus 188 ~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-------------------~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 188 PKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-------------------PIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred CCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-------------------CCCCCcEEEEeCcHHHHHHH
Confidence 3566666654 3468999999999988877773 168899999999955 333
Q ss_pred HHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 82 ~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+.. .++...+.+.+.. ..+.+.+..-+...+|.+++.-+..++.+..
T Consensus 249 ~~~-~~~~~~~g~~~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~ 295 (613)
T COG1022 249 AFE-GGLALYGGVTVLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYK 295 (613)
T ss_pred HHH-HHHHhhcceEEEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHH
Confidence 322 3444444433332 3457778889999999999999877766554
No 245
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=36.31 E-value=2e+02 Score=25.23 Aligned_cols=53 Identities=13% Similarity=0.099 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhhCCCCccccccccccc---------ccccCCCCCEEEEEeCCCHHHHHHHH
Q 015313 34 SSALRISSLLCSNDLKTTSEKTKNENS---------AVLAGGCGARIGIVAKPSFEFVAGVL 86 (409)
Q Consensus 34 ~~~~~~a~~L~~~~~~~~~~~~~~~~~---------~~~g~~~g~~V~l~~~~~~~~~~~~~ 86 (409)
.++.+++..|.+.|..+..-+...-.+ ....+..-|.|++.++|.+++..-.+
T Consensus 13 ~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~~~~~~~l~~l~~~d~iifTS~naV~~~~~~l 74 (255)
T PRK05752 13 EECAALAASLAEAGIFSSSLPLLAIEPLPETPEQRALLLELDRYCAVIVVSKPAARLGLELL 74 (255)
T ss_pred HHHHHHHHHHHHcCCCEEEcCcEEEeeCCCCHHHHHHHhcCCCCCEEEEECHHHHHHHHHHH
Confidence 356777777888775544332222111 11345678899999999988866544
No 246
>PRK09088 acyl-CoA synthetase; Validated
Probab=35.50 E-value=3.1e+02 Score=26.55 Aligned_cols=77 Identities=13% Similarity=-0.064 Sum_probs=53.5
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+... .+...+|++...++-+... +..+++++..|+..+.++.. ..+.+...
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~---------- 89 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL--VALHFACARVGAIYVPLNWRLSASELDAL---------- 89 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEeeCccCCHHHHHHH----------
Confidence 68999998777665443 3677889998888876543 34578899999999888753 45555444
Q ss_pred Cccccceeeecch
Q 015313 265 RAGEAITAFTGVP 277 (409)
Q Consensus 265 i~~~~vt~~~~~P 277 (409)
+++.+++.++...
T Consensus 90 ~~~~~~~~ii~~~ 102 (488)
T PRK09088 90 LQDAEPRLLLGDD 102 (488)
T ss_pred HHhCCCCEEEEcc
Confidence 4556667766544
No 247
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=35.12 E-value=2e+02 Score=29.24 Aligned_cols=95 Identities=22% Similarity=0.249 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++.. +..+|. .-.+|++.+...+..+... .+..++|++...+|..-- .+..+++++..|+..+...
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecC
Confidence 4566665543 222232 2468999988777666544 478899999999988643 3456889999999988776
Q ss_pred C-cchHHHHHHHHhhcCCCCCCccccceeeecch
Q 015313 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (409)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (409)
. +....+... ++..+++.+++..
T Consensus 140 ~~~~~~~l~~~----------l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALR----------IDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEECC
Confidence 4 566666665 4556777776643
No 248
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.95 E-value=2.6e+02 Score=27.83 Aligned_cols=82 Identities=13% Similarity=0.068 Sum_probs=58.9
Q ss_pred eeechHHHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (409)
..+|++.+...+..+...+ +...+|++...++-+.-. +..+++++..|+..+..+. ++.+.+...
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l~~~~~~~~l~~~-------- 117 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNTNPLYTAREMEHQ-------- 117 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeecCCCCCHHHHHHH--------
Confidence 3689999988877776544 577899999988876543 3458889999999998775 455566555
Q ss_pred CCCccccceeeecchHHHH
Q 015313 263 GNRAGEAITAFTGVPTMYT 281 (409)
Q Consensus 263 ~~i~~~~vt~~~~~P~~l~ 281 (409)
+++-++..++.......
T Consensus 118 --l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 118 --FNDSGAKALVCLANMAH 134 (562)
T ss_pred --HhccCceEEEEecchhh
Confidence 56667777776555443
No 249
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=34.65 E-value=2.2e+02 Score=26.10 Aligned_cols=58 Identities=7% Similarity=0.005 Sum_probs=41.9
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
.+++.|+.. ..+-.-..+.++|...|.-+..+-|...+......++..++++++++.+
T Consensus 49 ~~~~~vv~a-SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 49 NECVHVVCS-SGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred ccCCeEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 345555444 4466677777888899987666655555566778899999999999875
No 250
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=34.65 E-value=3.3e+02 Score=26.47 Aligned_cols=85 Identities=18% Similarity=0.054 Sum_probs=59.9
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCH-HHHHHHHHHHhhCcEEEeCCCC--
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF-EFVAGVLGTWFSGCIAVPLALS-- 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~-~~~~~~~A~~~~G~~~~~i~~~-- 101 (409)
-.+|.+.+...+..+... .++..++++....|.+. ..+..+++++..|+..+..+..
T Consensus 159 v~~s~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 218 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD--------------------FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDIT 218 (502)
T ss_pred EEEecHHHHHHHHHHHHh--------------------CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHh
Confidence 478888887666544433 26677888777766542 3345567888999998887653
Q ss_pred CChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 102 YPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 102 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
.....+...+++.++..+...+.....+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 219 NNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred cCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 3556777888999999999988766544
No 251
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.48 E-value=3.4e+02 Score=26.77 Aligned_cols=85 Identities=8% Similarity=-0.101 Sum_probs=55.2
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCC-CEEEEEeCCC--HHHHHHHHHHHhhCcEEEeCCCC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG-ARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALS 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g-~~V~l~~~~~--~~~~~~~~A~~~~G~~~~~i~~~ 101 (409)
-.+|.+.+...+..+... +++.++ |++...+|.. ..++..+++.+..|+..+.+.+.
T Consensus 170 v~~s~~~~~~~~~~~~~~--------------------~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~ 229 (545)
T PRK07768 170 VQITHGNLYANAEAMFVA--------------------AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPM 229 (545)
T ss_pred EEEcHHHHHHHHHHHHHh--------------------cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHH
Confidence 478888886655444332 356666 7777776643 44555566778889887776542
Q ss_pred ---CChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 102 ---YPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 102 ---~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
..+..+..++++.++.++.+.......+
T Consensus 230 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l 260 (545)
T PRK07768 230 DFLRDPLLWAELISKYRGTMTAAPNFAYALL 260 (545)
T ss_pred HHHHhHHHHHHHHHHhCCEEEECchHHHHHH
Confidence 2455677889999999876655444433
No 252
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=33.83 E-value=2.9e+02 Score=23.29 Aligned_cols=89 Identities=9% Similarity=-0.046 Sum_probs=47.6
Q ss_pred eEEEecCc-hhHHHHHHHHHHHHhcCCEEEEc-cCcchHHHHHHHHhhcCCCCCCccccceeeecchH---HHHHHHHhh
Q 015313 213 QFLHCLPL-HHVHGLFNALLAPLYAGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT---MYTRLIQGY 287 (409)
Q Consensus 213 ~~l~~~pl-~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~---~l~~l~~~~ 287 (409)
+++.+.+- .|..|.......--..|..++.. ...+++++.+. +.+++++.+..+-. .+..+.+..
T Consensus 85 vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~----------~~~~~~d~v~lS~~~~~~~~~~~~~i 154 (201)
T cd02070 85 VVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEA----------VKEHKPDILGLSALMTTTMGGMKEVI 154 (201)
T ss_pred EEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH----------HHHcCCCEEEEeccccccHHHHHHHH
Confidence 34444442 37777643222223578887754 45678898888 66678888765443 233332221
Q ss_pred hhhhHHHHHHhhhhh-ccceEEEeeCCCCCHHH
Q 015313 288 EAMDTELQAASASAA-KQLRLMMCGSSALPLPV 319 (409)
Q Consensus 288 ~~~~~~~~~~~~~~~-~~lr~v~~gG~~~~~~~ 319 (409)
+ ..+.... ..+ .+++||.+++++.
T Consensus 155 ~-------~lr~~~~~~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 155 E-------ALKEAGLRDKV-KVMVGGAPVNQEF 179 (201)
T ss_pred H-------HHHHCCCCcCC-eEEEECCcCCHHH
Confidence 1 1111111 123 4677888888753
No 253
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=33.75 E-value=5.4e+02 Score=26.41 Aligned_cols=83 Identities=10% Similarity=-0.136 Sum_probs=59.1
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+...+ +..++|++...++-+.-. +...++++..|+..+.+.. .+.+.+...
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i---------- 143 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW--IVAMEACAAHSLICVPLYDTLGPGAVDYI---------- 143 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeccCCCHHHHHHH----------
Confidence 468998888777665543 788899988888876433 3457888999999887765 445555555
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
++..+++.+++....+..+
T Consensus 144 l~~~~~~~v~~~~~~~~~~ 162 (660)
T PLN02430 144 VDHAEIDFVFVQDKKIKEL 162 (660)
T ss_pred HhccCCCEEEECHHHHHHH
Confidence 6667889998876644433
No 254
>PRK13382 acyl-CoA synthetase; Provisional
Probab=33.54 E-value=3e+02 Score=27.28 Aligned_cols=83 Identities=14% Similarity=0.070 Sum_probs=58.6
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcc-hHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS-VRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+... .+..+++++...++-+-. .+..+++++..|+.++..+... ...+...
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~---------- 135 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEV---------- 135 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHH----------
Confidence 58888888777666554 367789999988876543 3456889999999999887643 4444444
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
+++.+++.++........+
T Consensus 136 l~~~~~~~vi~~~~~~~~~ 154 (537)
T PRK13382 136 VTREGVDTVIYDEEFSATV 154 (537)
T ss_pred HHhcCCCEEEEchhhHHHH
Confidence 5667888887766554433
No 255
>PRK13391 acyl-CoA synthetase; Provisional
Probab=33.34 E-value=4.7e+02 Score=25.54 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=65.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++.+...++ -.+|+..+...+..+...+ +..+++++....+-+.-. +..+++++..|+.++..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccc
Confidence 3455665544332 2488899887776665543 677889988887776543 345788899999999886
Q ss_pred Cc-chHHHHHHHHhhcCCCCCCccccceeeecchHHHHHH
Q 015313 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l 283 (409)
.. +...+... ++..++..++..+.....+
T Consensus 81 ~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 81 SHLTPAEAAYI----------VDDSGARALITSAAKLDVA 110 (511)
T ss_pred cccCHHHHHHH----------HhccCCcEEEEchhhHHHH
Confidence 53 45555554 6667888887777655443
No 256
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=33.08 E-value=2.2e+02 Score=21.69 Aligned_cols=67 Identities=16% Similarity=0.272 Sum_probs=44.3
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcE---------EEeCCCCCChHHHHH----HHhcCCceEEEechhHHHHHHHH
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCI---------AVPLALSYPESELLH----VMHDSDISMVLSTEDYREVLQNV 132 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~---------~~~i~~~~~~~~~~~----~l~~~~~~~vi~~~~~~~~~~~~ 132 (409)
..+..|+++.. .+.+..| ..+|.- +..++...+.+++.. ++.+-+.-+|+.++...+.+...
T Consensus 3 ~~~~~IaVIGD--~Dtv~GF---~LaGi~~~~~~~~~nf~~v~~~t~~eei~~~~~~~l~~~digIIlIte~~a~~i~~~ 77 (115)
T TIGR01101 3 EKGKLIAVIGD--EDTVVGF---LLGGIGEINKNRHPNFLVVDKNTTVSEIEDCFNRFLKRDDIAIILINQHIAEMIRHA 77 (115)
T ss_pred CCCcEEEEEec--HHHHHHH---HHhCCCccccccccceeeecCCCCHHHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHH
Confidence 45778999998 6777544 445543 233555555565444 46667888899998888887776
Q ss_pred hhccC
Q 015313 133 ASKSG 137 (409)
Q Consensus 133 ~~~~~ 137 (409)
..+..
T Consensus 78 I~~~~ 82 (115)
T TIGR01101 78 VDAHT 82 (115)
T ss_pred HHhcC
Confidence 66544
No 257
>PRK08162 acyl-CoA synthetase; Validated
Probab=33.07 E-value=2.5e+02 Score=27.79 Aligned_cols=83 Identities=14% Similarity=0.029 Sum_probs=61.9
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|++.+...+..+...+ +...+|++....+-+.-. +..+++++..|+..+..+. .+...+...
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~---------- 110 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTRLDAASIAFM---------- 110 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccccChHHHHHH----------
Confidence 589999988777766544 678899999888876533 4458888999998887765 455666555
Q ss_pred CccccceeeecchHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l 283 (409)
++..+++.++..+..+..+
T Consensus 111 l~~~~~~~i~~~~~~~~~~ 129 (545)
T PRK08162 111 LRHGEAKVLIVDTEFAEVA 129 (545)
T ss_pred HHhCCCeEEEEccchhhHH
Confidence 6667888888887766554
No 258
>PRK06178 acyl-CoA synthetase; Validated
Probab=32.88 E-value=2.7e+02 Score=27.76 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=60.0
Q ss_pred eechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+... .+...++++...++-+.-. +..+++++..|+..+..+. .....+...
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~---------- 125 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF--HIVFFGILKLGAVHVPVSPLFREHELSYE---------- 125 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH--HHHHHHHHHhCeEEeecCCCCCHHHHHHH----------
Confidence 58999988777666554 3677888888887776543 3457888999998887765 444555444
Q ss_pred CccccceeeecchHHHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTRLI 284 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~l~ 284 (409)
+++.++..++..+.....+.
T Consensus 126 l~~~~~~~ii~~~~~~~~l~ 145 (567)
T PRK06178 126 LNDAGAEVLLALDQLAPVVE 145 (567)
T ss_pred HHhcCCcEEEEccchHHHHH
Confidence 66678888888887665543
No 259
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=32.79 E-value=4.7e+02 Score=25.44 Aligned_cols=73 Identities=10% Similarity=0.091 Sum_probs=45.0
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHH-HHhhCcEEEeC--C------------CCCChHHHHHHHhcCCc------eEEEe
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAVPL--A------------LSYPESELLHVMHDSDI------SMVLS 121 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A-~~~~G~~~~~i--~------------~~~~~~~~~~~l~~~~~------~~vi~ 121 (409)
+++++||.| + +..++....+ +...|++++=+ + -+.+.+.+...++...+ +++++
T Consensus 105 l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t 179 (450)
T TIGR02618 105 IAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVT 179 (450)
T ss_pred hCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEe
Confidence 689999977 3 3556556665 68888876655 2 23477888888875432 23333
Q ss_pred ch---------hHHHHHHHHhhccCCce
Q 015313 122 TE---------DYREVLQNVASKSGAKF 140 (409)
Q Consensus 122 ~~---------~~~~~~~~~~~~~~~~~ 140 (409)
.. ...+.+.++.++.+..+
T Consensus 180 ~N~~GG~pvs~~~l~~I~elA~~~Gl~v 207 (450)
T TIGR02618 180 VNLAGGQPVSMANMREVRELCEAHGIKV 207 (450)
T ss_pred cccCCCeeCCHHHHHHHHHHHHHcCCEE
Confidence 32 34566666666665444
No 260
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=32.51 E-value=2.2e+02 Score=21.42 Aligned_cols=39 Identities=13% Similarity=0.200 Sum_probs=32.1
Q ss_pred HHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 85 ~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
...+...|.-++.+....+.+++...+.+.+|++|....
T Consensus 20 ~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 20 ARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 334445788888999999999999999999999988753
No 261
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=32.51 E-value=4.3e+02 Score=25.27 Aligned_cols=61 Identities=11% Similarity=0.032 Sum_probs=36.9
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCC-hHHHHHHHhcCCceEEEec-hhHHH
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYP-ESELLHVMHDSDISMVLST-EDYRE 127 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~-~~~~~~~l~~~~~~~vi~~-~~~~~ 127 (409)
-.|.+|+|+......+-++-+-.- +|..++.+..... .+.....++.......|.+ .+..+
T Consensus 272 l~Gkrv~i~gd~~~~~~l~~~L~e-lGm~~v~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~~~ 334 (407)
T TIGR01279 272 LRGKKIFFFGDNLLELPLARFLKR-CGMEVVECGTPYIHRRFHAAELALLEGGVRIVEQPDFHR 334 (407)
T ss_pred cCCCEEEEECCchHHHHHHHHHHH-CCCEEEEecCCCCChHHHHHHHhhcCCCCeEEeCCCHHH
Confidence 469999999987655554444444 7998887755444 3344555565554444444 44443
No 262
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=32.35 E-value=2.6e+02 Score=25.25 Aligned_cols=54 Identities=13% Similarity=0.076 Sum_probs=38.1
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
+....+-.-..+.++|...|.-++.+-|...+.+....++..+++++.++.++.
T Consensus 69 v~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~ 122 (304)
T cd01562 69 VAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFD 122 (304)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 334556777777788888887555554444455567789999999999987643
No 263
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=32.24 E-value=2.9e+02 Score=27.40 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh----cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~ 243 (409)
.++.++++.. | -.+|++.+...+..+... .+...+|++...+|-..- ++..+++++..|++.+.+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEecc
Confidence 4566776532 2 258999888777666543 467888999888877643 344588899999999977
Q ss_pred cC-cchHHHHHHHHhhcCCCCCCccccceeeecchHHHHH
Q 015313 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (409)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~ 282 (409)
+. +....+... +.+.+++.++........
T Consensus 107 ~p~~~~~~~~~~----------l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 107 NPLYTPRELKHQ----------LIDSGASVLVVIDNFGTT 136 (560)
T ss_pred CccCCHHHHHHH----------HHhcCCeEEEEcchhHHH
Confidence 64 455665555 566788888876655443
No 264
>PLN00011 cysteine synthase
Probab=32.07 E-value=3.8e+02 Score=24.64 Aligned_cols=59 Identities=10% Similarity=-0.089 Sum_probs=42.6
Q ss_pred CCCC-CEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 65 GGCG-ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 65 ~~~g-~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
+.+| +.|+ ....+-.-..+.+++...|.-+..+-|...+......++..++++++++++
T Consensus 65 ~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 65 ITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 5667 4554 466667777788888899986665544444456677889999999999863
No 265
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=31.99 E-value=2.6e+02 Score=27.62 Aligned_cols=84 Identities=14% Similarity=-0.041 Sum_probs=57.7
Q ss_pred eeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
..+|+..+...+..+...+ +...+|++....+-..-. +..+++++..|+..+..+.. ..+.+...
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~--------- 106 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNPRLFPEQIAWI--------- 106 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeeccccccCHHHHHHH---------
Confidence 4679999987777666544 678889988887765433 33577888999999888754 44554444
Q ss_pred CCccccceeeecchHHHHHH
Q 015313 264 NRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~~l 283 (409)
++..++..++........+
T Consensus 107 -l~~~~~~~i~~~~~~~~~~ 125 (542)
T PRK06018 107 -INHAEDRVVITDLTFVPIL 125 (542)
T ss_pred -HhccCCCEEEEccccHHHH
Confidence 5667777777766544433
No 266
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=31.97 E-value=4.4e+02 Score=26.69 Aligned_cols=95 Identities=20% Similarity=0.184 Sum_probs=63.3
Q ss_pred CCCCcEEEEecCCCCCCCceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc
Q 015313 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (409)
Q Consensus 168 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~ 244 (409)
.++.++++. .+..+| ..-.+|++.+...+..+... .+..++|++...+|..--. +..+++++..|+..+...
T Consensus 66 ~p~~~A~~~-~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIA-VSTETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEE-EcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 456666554 322222 23468999998777665543 4788999999999876433 345888999999888776
Q ss_pred C-cchHHHHHHHHhhcCCCCCCccccceeeecch
Q 015313 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (409)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P 277 (409)
. +....+... +...++..+++..
T Consensus 141 ~~~~~~~l~~~----------l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAAR----------IDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHH----------HHhcCCcEEEEcc
Confidence 4 556666555 5556777777654
No 267
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=31.53 E-value=2.7e+02 Score=27.71 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=57.0
Q ss_pred eeechHHHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCC
Q 015313 188 VVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~ 262 (409)
..+|+..+...+..+...+ +..++|++...++-+.- .+..+++++..|+..+..+. .....+...
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~-------- 117 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQ-------- 117 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHH--------
Confidence 3689999988777766544 67789999988777653 34568899999999987765 445555555
Q ss_pred CCCccccceeeecchHH
Q 015313 263 GNRAGEAITAFTGVPTM 279 (409)
Q Consensus 263 ~~i~~~~vt~~~~~P~~ 279 (409)
++.-++..++..+.+
T Consensus 118 --l~~~~~~~~i~~~~~ 132 (562)
T PRK12492 118 --FKDSGARALVYLNMF 132 (562)
T ss_pred --HhccCceEEEecccc
Confidence 555677777765543
No 268
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=31.49 E-value=4.6e+02 Score=24.91 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=37.1
Q ss_pred CCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCC-ChHHHHHHHhcCCceEEEechhHH
Q 015313 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-PESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 67 ~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~-~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
.|.+|+|+......+-++-+..- +|..++.+.... ..+.....++.......|.+....
T Consensus 275 ~Gkrv~i~g~~~~~~~la~~L~e-lGm~vv~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~ 334 (396)
T cd01979 275 RGKSIFFMGDNLLEIPLARFLTR-CGMIVVEVGTPYLDKRFQAAELELLPPMVRIVEKPDN 334 (396)
T ss_pred cCCEEEEECCchHHHHHHHHHHH-CCCEEEeeCCCcCChHHHHHHHHhcCCCCeEEECCCH
Confidence 58899999887655555555544 999888875543 344445555655555656654333
No 269
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=31.15 E-value=65 Score=27.70 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=23.2
Q ss_pred HHHHHhhCcEEEeCCCCCChHHHHHHHhcCC
Q 015313 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSD 115 (409)
Q Consensus 85 ~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~ 115 (409)
.=++..+|+.+++|++..+.+++..+++.++
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 3467788999999999999999999999875
No 270
>PRK13390 acyl-CoA synthetase; Provisional
Probab=31.12 E-value=5e+02 Score=25.22 Aligned_cols=77 Identities=9% Similarity=0.023 Sum_probs=53.2
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+...+ +..++|++....+-+... +..+++++..|+..+..+.. ....+-..
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~--~~~~la~~~~Ga~~~~l~~~~~~~~~~~~---------- 91 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA--LVVLWAALRSGLYITAINHHLTAPEADYI---------- 91 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEeccccCCCHHHHHHH----------
Confidence 689999988777766544 677899988887776543 34588899999998877754 34444444
Q ss_pred Cccccceeeecch
Q 015313 265 RAGEAITAFTGVP 277 (409)
Q Consensus 265 i~~~~vt~~~~~P 277 (409)
+...+++.+....
T Consensus 92 ~~~~~~~~~i~~~ 104 (501)
T PRK13390 92 VGDSGARVLVASA 104 (501)
T ss_pred HHhcCCcEEEEcc
Confidence 4445666665544
No 271
>PLN02479 acetate-CoA ligase
Probab=31.10 E-value=3.6e+02 Score=26.94 Aligned_cols=82 Identities=13% Similarity=0.019 Sum_probs=60.5
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+...+ +..++|++....+-+-. ++..+++++..|+..+..+.. ....+...
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~~~~~~~~l~~~---------- 112 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA--MYEAHFGVPMAGAVVNCVNIRLNAPTIAFL---------- 112 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHHHHHHHHhCCcEEEEeccccCHHHHHHH----------
Confidence 579999888777776554 67899999988886543 234578899999999888754 45555555
Q ss_pred CccccceeeecchHHHHH
Q 015313 265 RAGEAITAFTGVPTMYTR 282 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l~~ 282 (409)
+++.+++.++..+..+..
T Consensus 113 l~~~~~~~ii~~~~~~~~ 130 (567)
T PLN02479 113 LEHSKSEVVMVDQEFFTL 130 (567)
T ss_pred HhhcCceEEEEchhhhhH
Confidence 677889999887776543
No 272
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.82 E-value=5.2e+02 Score=25.54 Aligned_cols=87 Identities=9% Similarity=0.022 Sum_probs=55.6
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccC-CCCCEEEEEeCCC-HHHHHHHHHHHhhCcEEEeCC-CC
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLA-LS 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~-~~g~~V~l~~~~~-~~~~~~~~A~~~~G~~~~~i~-~~ 101 (409)
-.+|+..+...+..+... .++ ..++++....+.. .-.+..+++.+..|+..+..+ ..
T Consensus 192 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~ 251 (542)
T PRK07786 192 AVLTHANLTGQAMTCLRT--------------------NGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGA 251 (542)
T ss_pred hhhhHHHHHHHHHHHHHh--------------------cCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCC
Confidence 367777776655543322 244 3455554444422 112345677788888777643 24
Q ss_pred CChHHHHHHHhcCCceEEEechhHHHHHHH
Q 015313 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 102 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
.+++.+...+++.++.++...+..+..+..
T Consensus 252 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 281 (542)
T PRK07786 252 FDPGQLLDVLEAEKVTGIFLVPAQWQAVCA 281 (542)
T ss_pred cCHHHHHHHHHHcCCeEEEehHHHHHHHHh
Confidence 578888999999999999999887765543
No 273
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=30.14 E-value=1.6e+02 Score=24.43 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=20.5
Q ss_pred CccccHHHHHHHHHHHHHHHhhC
Q 015313 24 QKSYSYDQLASSALRISSLLCSN 46 (409)
Q Consensus 24 ~~~~Ty~~l~~~~~~~a~~L~~~ 46 (409)
...+||.|+.+.+.++|..+.+.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~ 36 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD 36 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH
Confidence 45689999999999999999884
No 274
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=30.04 E-value=1.2e+02 Score=22.72 Aligned_cols=31 Identities=10% Similarity=-0.046 Sum_probs=25.4
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCc
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGC 93 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~ 93 (409)
.++.+++.|+++|..+.....+.+.+..+|.
T Consensus 73 ~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 73 LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 4778899999999988777777777777786
No 275
>PF13550 Phage-tail_3: Putative phage tail protein
Probab=29.76 E-value=79 Score=25.37 Aligned_cols=44 Identities=20% Similarity=0.074 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC
Q 015313 33 ASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (409)
Q Consensus 33 ~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~ 76 (409)
..+++++|..+.+.-...+.+..-......+.+.+||.|.|-.+
T Consensus 108 ~~qA~r~a~~~l~~~~~~r~t~~f~~~~~~~~l~pGDvi~l~~~ 151 (164)
T PF13550_consen 108 ASQAQRLAERLLRRSRYERRTVSFTLPPDGLALEPGDVIALSDD 151 (164)
T ss_pred HHHHHHHHHHHHHHhhccceEEEEEEChhhccCCCCCEEEEEeC
Confidence 44566666666665545556777777788899999999998876
No 276
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=29.70 E-value=39 Score=29.74 Aligned_cols=61 Identities=15% Similarity=0.153 Sum_probs=49.8
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCC--ChHHHHHHHhc-CCceEEEech
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY--PESELLHVMHD-SDISMVLSTE 123 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~--~~~~~~~~l~~-~~~~~vi~~~ 123 (409)
+-.-+|.-=++.+|+++.+++...++.-++.+-+|++|++ ..+.+..+++. +.+++++..+
T Consensus 105 ~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 105 CVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred heecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 4667886677889999999999999999999999998865 45567777765 5889988775
No 277
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=29.66 E-value=2e+02 Score=27.40 Aligned_cols=74 Identities=11% Similarity=0.084 Sum_probs=41.3
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHH---------HHHhhCcEEEeCC---CCCChHHHHHHHhcCCceEEEechh------H
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVL---------GTWFSGCIAVPLA---LSYPESELLHVMHDSDISMVLSTED------Y 125 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~---------A~~~~G~~~~~i~---~~~~~~~~~~~l~~~~~~~vi~~~~------~ 125 (409)
=+++||+|.-+-..+=-++..-. .-.....+..+++ ...+-+++..++++.+|++||+... .
T Consensus 106 Ll~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d 185 (399)
T PF00464_consen 106 LLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPID 185 (399)
T ss_dssp HT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---
T ss_pred HHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccC
Confidence 35889999887766533322111 2233345566676 4557778999999999999999874 2
Q ss_pred HHHHHHHhhccC
Q 015313 126 REVLQNVASKSG 137 (409)
Q Consensus 126 ~~~~~~~~~~~~ 137 (409)
++.+.++.++.+
T Consensus 186 ~~~~reIad~vg 197 (399)
T PF00464_consen 186 FKRFREIADEVG 197 (399)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 356666666655
No 278
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=29.35 E-value=4.6e+02 Score=27.13 Aligned_cols=88 Identities=5% Similarity=-0.072 Sum_probs=62.0
Q ss_pred ceeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCC
Q 015313 186 KGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPV 261 (409)
Q Consensus 186 K~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~ 261 (409)
....+|++.+...+..+... .+..++|++...++-+. ..+...++++..|+..+.... .+.+.+...
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~i------- 188 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYA------- 188 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhh-------
Confidence 35688999998877776554 47889999988888754 334567888999988876654 445554444
Q ss_pred CCCCccccceeeecchHHHHHHHH
Q 015313 262 NGNRAGEAITAFTGVPTMYTRLIQ 285 (409)
Q Consensus 262 ~~~i~~~~vt~~~~~P~~l~~l~~ 285 (409)
++..+++.+++....+..+.+
T Consensus 189 ---l~~s~~~~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 189 ---LRETECKAIVCNGKNVPNLLR 209 (700)
T ss_pred ---hhccCccEEEECHHHHHHHHH
Confidence 666788888887766555543
No 279
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=29.33 E-value=5.6e+02 Score=25.25 Aligned_cols=62 Identities=16% Similarity=0.268 Sum_probs=44.7
Q ss_pred ccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH
Q 015313 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 125 (409)
+++.++|++....+-.-. ++..+++.+..|+.++.... .+.+.+...+++.++.+++.....
T Consensus 223 ~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~~~~ 286 (547)
T PRK06087 223 LNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDI-FTPDACLALLEQQRCTCMLGATPF 286 (547)
T ss_pred cCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCC-CCHHHHHHHHHHcCCCEEeccHHH
Confidence 477889988877774422 34456777788988887654 467777788899999988865443
No 280
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=29.30 E-value=1e+02 Score=27.68 Aligned_cols=52 Identities=8% Similarity=-0.011 Sum_probs=40.1
Q ss_pred cccHHHHHHH-----HHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcE
Q 015313 26 SYSYDQLASS-----ALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (409)
Q Consensus 26 ~~Ty~~l~~~-----~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~ 94 (409)
.+.|.++.+. ...+...|.+ .|+.+++.|+++|.+......+++++..+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-----------------~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-----------------RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-----------------cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 5667776531 3555556665 48888999999999999999999999888875
No 281
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=29.27 E-value=1.3e+02 Score=21.07 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=30.1
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEE
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~ 96 (409)
+|++.|+.++.+..+-.|.+..+=|++++.-+-+
T Consensus 10 agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 10 AGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred cCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 8999999999999999999999999888876544
No 282
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=29.08 E-value=26 Score=16.14 Aligned_cols=9 Identities=33% Similarity=0.394 Sum_probs=6.6
Q ss_pred ccccccccc
Q 015313 334 RYGMTEFVM 342 (409)
Q Consensus 334 ~YG~tE~g~ 342 (409)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 283
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=28.74 E-value=2.4e+02 Score=26.63 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=34.2
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC-----CChHHHHHHHhcCCceEEE
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVL 120 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~-----~~~~~~~~~l~~~~~~~vi 120 (409)
+++++||.|++-.+. |.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 68 l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 68 LGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred cCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 468899988765443 444455667789887766432 456667766643 456665
No 284
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=28.41 E-value=2.6e+02 Score=26.24 Aligned_cols=56 Identities=18% Similarity=0.185 Sum_probs=36.0
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC-----CCChHHHHHHHhc---CCceEEEe
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHD---SDISMVLS 121 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~-----~~~~~~~~~~l~~---~~~~~vi~ 121 (409)
+++++||.|++-.+. +....-++...|+.++.++. ..+.+.+...+++ -+.++|+.
T Consensus 64 l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 64 LGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred cCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 467899997776654 34444666778887776543 2466777777763 34566653
No 285
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=27.89 E-value=8.8 Score=26.77 Aligned_cols=68 Identities=16% Similarity=0.179 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHH
Q 015313 31 QLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHV 110 (409)
Q Consensus 31 ~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~ 110 (409)
++.+.++..++-|+..|+.|+ |.++.|.-.+|+... ..-.+|. -.++
T Consensus 9 ~il~~ie~~inELk~dG~ePD-------------------ivL~G~ef~e~~~~~-~l~~~~l-------------kvy~ 55 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD-------------------IVLVGPEFYEFLSEE-VLEVSGL-------------KVYV 55 (85)
T ss_dssp HHHHHHHHHHHHHHHTT-----------------------EEEE-HHHHHHHHH----EETTE-------------EEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCC-------------------EEEEcHHHHHHHHHH-HHHhhCc-------------eEEE
Confidence 456678888899999855442 777777666665430 0011111 1245
Q ss_pred HhcCCceEEEechhHHHHHHH
Q 015313 111 MHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 111 l~~~~~~~vi~~~~~~~~~~~ 131 (409)
+++.+.+.||.|++++-++..
T Consensus 56 i~ELg~DAVvaDSk~LG~~~~ 76 (85)
T PF08967_consen 56 IEELGSDAVVADSKYLGQLKK 76 (85)
T ss_dssp -GGGTTEEEEE-TTTTTTSTT
T ss_pred HHhcCCceEEEchHHhccccc
Confidence 678889999999887655443
No 286
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=27.68 E-value=1.6e+02 Score=23.01 Aligned_cols=55 Identities=9% Similarity=-0.022 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeC--CCHHHHHHHHHHHhhCcEEEeC
Q 015313 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK--PSFEFVAGVLGTWFSGCIAVPL 98 (409)
Q Consensus 28 Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~--~~~~~~~~~~A~~~~G~~~~~i 98 (409)
....-...-..++..+.+. +.+++||.+.++.. +++..+-+...+..-|+.++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~----------------~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLAL----------------YDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHH----------------TT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHH----------------cCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3344444445666777664 56899999888887 5677777888888888877754
No 287
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=27.67 E-value=4.3e+02 Score=25.60 Aligned_cols=70 Identities=16% Similarity=0.074 Sum_probs=41.6
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC-----CChHHHHHHHhcCCceEEEech-----hHHHHHHHHh
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLSTE-----DYREVLQNVA 133 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~-----~~~~~~~~~l~~~~~~~vi~~~-----~~~~~~~~~~ 133 (409)
++++||.|++-.+. |.....++...|+.+++++.. .+.+.+...+.. +.++|+... ...+.+.++.
T Consensus 107 ~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~~G~p~dl~~I~~la 182 (438)
T PRK15407 107 ALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHTLGNPFDLAAVKAFC 182 (438)
T ss_pred CCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCCCCChhhHHHHHHHH
Confidence 78999998866544 344456667789887766542 356666666543 456666532 2334444555
Q ss_pred hccC
Q 015313 134 SKSG 137 (409)
Q Consensus 134 ~~~~ 137 (409)
++.+
T Consensus 183 ~~~g 186 (438)
T PRK15407 183 DKHN 186 (438)
T ss_pred HHCC
Confidence 5444
No 288
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=27.62 E-value=5.6e+02 Score=24.67 Aligned_cols=58 Identities=12% Similarity=0.020 Sum_probs=35.6
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChH-HHHHHHhcCCceEEEech
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPES-ELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~-~~~~~l~~~~~~~vi~~~ 123 (409)
-.|.+|+|+......+-++-+-.-.+|..++.+....... .....++.....+.|.++
T Consensus 288 l~Gkrvai~g~~~~~~~la~~L~eelGm~~v~v~t~~~~~~~~~~~~~~l~~~~~v~~~ 346 (427)
T PRK02842 288 LRGKRVFFLPDSQLEIPLARFLSRECGMELVEVGTPYLNRRFLAAELALLPDGVRIVEG 346 (427)
T ss_pred cCCcEEEEECCchhHHHHHHHHHHhCCCEEEEeCCCCCCHHHHHHHHHhccCCCEEEEC
Confidence 3588999998776555555553334899888886544433 334445555445555554
No 289
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=27.47 E-value=3.3e+02 Score=26.06 Aligned_cols=58 Identities=9% Similarity=-0.094 Sum_probs=41.3
Q ss_pred EEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHH
Q 015313 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 71 V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
-.+.....-.-..+.+++...|.-+...-|...+.+....++..+++++.++.++...
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 3455555677777888889999866555444455556777899999999998765443
No 290
>PRK06145 acyl-CoA synthetase; Validated
Probab=27.38 E-value=5.8e+02 Score=24.71 Aligned_cols=67 Identities=9% Similarity=0.043 Sum_probs=47.6
Q ss_pred ccCCCCCEEEEEeCCCHH--HHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~--~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (409)
.+++.++++....+-.-. +....++++..|+..+..+ ..+...+-..+++.++.++...+.....+.
T Consensus 185 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll 253 (497)
T PRK06145 185 LGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVL 253 (497)
T ss_pred hCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHH
Confidence 478889998887774322 2233456677787766654 467888888999999999999887765543
No 291
>PRK10717 cysteine synthase A; Provisional
Probab=27.30 E-value=4.7e+02 Score=24.06 Aligned_cols=59 Identities=14% Similarity=-0.007 Sum_probs=42.0
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
+++|+.|+ ....+-.-..+.+++...|.-+..+-|...+......++..++++++++..
T Consensus 61 ~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 61 LKPGGTIV-EGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred CCCCCEEE-EeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 35676654 466667777778888889986555544444555677889999999999863
No 292
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=27.30 E-value=1.5e+02 Score=28.92 Aligned_cols=59 Identities=14% Similarity=0.054 Sum_probs=37.5
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCC-CCCChHHHHHHHhcCCceEEEechh
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLA-LSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~-~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
+++||+|++=-| ++.-+...+-..-+..+.+|++ -....+.+...++.-+++++.+.+.
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 368888776544 4444444444444444444553 3667788888888888999998764
No 293
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=27.17 E-value=6.6e+02 Score=25.34 Aligned_cols=102 Identities=11% Similarity=0.040 Sum_probs=65.5
Q ss_pred CCCCcEEEEec--CCCCCCCceeeechHHHHHHHHHHHhhc--ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEc
Q 015313 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (409)
Q Consensus 168 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~ 243 (409)
.++.++++... .+++|. ...+|+..+...+..+...+ ...++|++...++-+.- ++..+++++..|+.++.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEec
Confidence 35666655432 112232 34689998887776655443 25788999988888753 345688999999998876
Q ss_pred -cCcc---hHHHHHHHHhhcCCCCCCccccceeeecchHHHHHH
Q 015313 244 -PKFS---VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (409)
Q Consensus 244 -~~~~---~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l 283 (409)
+... .+.+... ++..++..++..+..+..+
T Consensus 123 ~~~~~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 123 FAPELPGHAERLDTA----------LRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCCcchhHHHHHHH----------HHhCCCCEEEEcHHHHHHH
Confidence 3322 3444444 6667888888877666544
No 294
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.08 E-value=3.4e+02 Score=25.10 Aligned_cols=69 Identities=12% Similarity=0.170 Sum_probs=50.2
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHHHHHhh
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (409)
.|+++|++|+|..--..-++...+|-++ |.-+..|+... ..-...+++.++++.|...+..+..+.+..
T Consensus 177 ~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 177 SGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred cCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 3888999999999999888888887654 56666665443 234556888999998887765665555443
No 295
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=27.06 E-value=2.5e+02 Score=25.23 Aligned_cols=56 Identities=21% Similarity=0.228 Sum_probs=35.4
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC----------CCChHHHHHHHhc-CCceEEEec
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL----------SYPESELLHVMHD-SDISMVLST 122 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~----------~~~~~~~~~~l~~-~~~~~vi~~ 122 (409)
-+++||+|.+.-+.+.. ..-++...|+.++.+++ ..+.+.+...+++ .++++++..
T Consensus 95 l~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 95 VCGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred cCCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 35789988877554433 33455667887776644 3467778777764 456665554
No 296
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=27.01 E-value=2.5e+02 Score=27.33 Aligned_cols=58 Identities=19% Similarity=-0.013 Sum_probs=40.0
Q ss_pred cCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEcc----CcchHHHHHHHHhhcCCCCCCccccceeeecchHHH
Q 015313 208 YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP----KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (409)
Q Consensus 208 ~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l 280 (409)
..++|.++.--|-++..-. + .-..|..++-.+ +.+++.+-+. +..++|..++++|++-
T Consensus 176 ~~pGd~v~vE~PtY~~~~~---~--~~~~g~~~~~vp~d~~G~~~e~le~~----------~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ---A--LEALGARVIPVPVDEDGIDPEALEEA----------LAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH---H--HHHcCCcEEecCCCCCCCCHHHHHHH----------HhhcCCcEEEECCCCC
Confidence 4588999999998875422 2 245677777664 4677777777 5556788888888653
No 297
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=27.01 E-value=1e+02 Score=25.97 Aligned_cols=23 Identities=4% Similarity=0.134 Sum_probs=20.7
Q ss_pred CccccHHHHHHHHHHHHHHHhhC
Q 015313 24 QKSYSYDQLASSALRISSLLCSN 46 (409)
Q Consensus 24 ~~~~Ty~~l~~~~~~~a~~L~~~ 46 (409)
...+||.++++.++.+|..+.+.
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~s 26 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRAS 26 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHHc
Confidence 35689999999999999999985
No 298
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=26.59 E-value=4.2e+02 Score=24.95 Aligned_cols=55 Identities=13% Similarity=0.065 Sum_probs=39.2
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
.+.+..+-.-....++|...|..+..+-|...+......++..++++++++.++.
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 105 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYD 105 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHH
Confidence 4445556667777788889998666554545555667788999999999976443
No 299
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=26.47 E-value=4.1e+02 Score=25.60 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=36.2
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC---------CCh-----HHHHHHHhcCC-ce----EEEechh
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS---------YPE-----SELLHVMHDSD-IS----MVLSTED 124 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~---------~~~-----~~~~~~l~~~~-~~----~vi~~~~ 124 (409)
-+++||.|++ -.|+=-.+ +-|+...|+.++.|+|. .++ +.+...+++.. ++ ++|+.+.
T Consensus 102 ~~~~gd~VLv-~RN~HkSv--~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT 178 (417)
T PF01276_consen 102 LCRPGDKVLV-DRNCHKSV--YNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT 178 (417)
T ss_dssp HTTTTCEEEE-ETT--HHH--HHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-
T ss_pred hcCCCCEEEE-cCCcHHHH--HHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC
Confidence 4578998654 44553333 34999999999988763 233 67777776643 33 4666665
Q ss_pred H
Q 015313 125 Y 125 (409)
Q Consensus 125 ~ 125 (409)
+
T Consensus 179 Y 179 (417)
T PF01276_consen 179 Y 179 (417)
T ss_dssp T
T ss_pred C
Confidence 4
No 300
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.42 E-value=3.2e+02 Score=27.14 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=55.5
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cchHHHHHHHHhhcCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (409)
.+|+..+...+..+...+ +...+|++...++-..-. +..+++++..|+..+..+. +....+...
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~---------- 116 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQ---------- 116 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHH----------
Confidence 589998887777765544 567889988888776543 3457888999988887765 344444444
Q ss_pred CccccceeeecchHHH
Q 015313 265 RAGEAITAFTGVPTMY 280 (409)
Q Consensus 265 i~~~~vt~~~~~P~~l 280 (409)
++..+++.++..+...
T Consensus 117 l~~~~~~~ii~~~~~~ 132 (563)
T PRK06710 117 LHDSGAKVILCLDLVF 132 (563)
T ss_pred HhccCCeEEEEeccch
Confidence 5566777777665443
No 301
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=26.32 E-value=2.9e+02 Score=23.81 Aligned_cols=25 Identities=24% Similarity=0.240 Sum_probs=18.8
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHH
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLG 87 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A 87 (409)
..+..-|.|++..+++.+.+.-.+.
T Consensus 48 ~~~~~~d~iiftS~~av~~~~~~~~ 72 (249)
T PRK05928 48 LAALGADWVIFTSKNAVEFLLSALK 72 (249)
T ss_pred hhCCCCCEEEEECHHHHHHHHHHHH
Confidence 3456678999999999888766543
No 302
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=26.10 E-value=2.9e+02 Score=23.87 Aligned_cols=85 Identities=14% Similarity=0.136 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHh--cCCEEEEc-cCcchHHHHHHHHhhcCCCCCCccccceeeecchHHHHHHHHhhhhhhHHHHHHh
Q 015313 222 HVHGLFNALLAPLY--AGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAAS 298 (409)
Q Consensus 222 ~~~g~~~~~~~~l~--~G~~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~~~~~ 298 (409)
|..|- .+..+++ +|.-++-+ ....++.+... .++++++.+.++..|=..+... +..- -.++
T Consensus 117 HdIGk--~iV~~ml~~aGfevidLG~dvP~e~fve~----------a~e~k~d~v~~SalMTttm~~~-~~vi---E~L~ 180 (227)
T COG5012 117 HDIGK--NIVATMLEAAGFEVIDLGRDVPVEEFVEK----------AKELKPDLVSMSALMTTTMIGM-KDVI---ELLK 180 (227)
T ss_pred HHHHH--HHHHHHHHhCCcEEEecCCCCCHHHHHHH----------HHHcCCcEEechHHHHHHHHHH-HHHH---HHHH
Confidence 55554 2444454 45444433 45678888888 6778999998877665555442 1100 1123
Q ss_pred hhhhccceEEEeeCCCCCHHHHHH
Q 015313 299 ASAAKQLRLMMCGSSALPLPVMQQ 322 (409)
Q Consensus 299 ~~~~~~lr~v~~gG~~~~~~~~~~ 322 (409)
...++.-=.+.+||+|++.+..++
T Consensus 181 eeGiRd~v~v~vGGApvtq~~a~~ 204 (227)
T COG5012 181 EEGIRDKVIVMVGGAPVTQDWADK 204 (227)
T ss_pred HcCCccCeEEeecCccccHHHHHH
Confidence 333444456667999999877654
No 303
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=25.98 E-value=2e+02 Score=20.79 Aligned_cols=31 Identities=10% Similarity=-0.130 Sum_probs=25.1
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhhCcE
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~ 94 (409)
++.+++.|+++|.+......+...+...|..
T Consensus 62 ~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 62 KPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 6677899999999988777777777788863
No 304
>PRK06382 threonine dehydratase; Provisional
Probab=25.79 E-value=5.3e+02 Score=24.64 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=38.1
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHH
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 127 (409)
+.+..+-.-..+.++|...|.-+..+-|...+......++..+++++++..++..
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 4445566666777888889986555544444455566789999999999875443
No 305
>PRK07276 DNA polymerase III subunit delta'; Validated
Probab=25.76 E-value=5.1e+02 Score=23.51 Aligned_cols=45 Identities=13% Similarity=-0.002 Sum_probs=26.1
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCC
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSD 115 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~ 115 (409)
-+...+.|+.-++++-+ +...++.+..+++++ +.+.+..++++.+
T Consensus 131 Pp~~t~~iL~t~~~~~l---LpTI~SRcq~i~f~~--~~~~~~~~L~~~g 175 (290)
T PRK07276 131 PQSEIYIFLLTNDENKV---LPTIKSRTQIFHFPK--NEAYLIQLLEQKG 175 (290)
T ss_pred CCCCeEEEEEECChhhC---chHHHHcceeeeCCC--cHHHHHHHHHHcC
Confidence 34445566655555544 556677777777754 4555666665443
No 306
>PRK07048 serine/threonine dehydratase; Validated
Probab=25.73 E-value=4.4e+02 Score=24.11 Aligned_cols=53 Identities=9% Similarity=-0.080 Sum_probs=38.5
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhH
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~ 125 (409)
+....+-.-..+.++|...|.-+..+-|...+......++..++++++++...
T Consensus 76 v~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~~ 128 (321)
T PRK07048 76 VTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRYT 128 (321)
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 44455777788888889999865555444445566778899999999998643
No 307
>PRK12582 acyl-CoA synthetase; Provisional
Probab=25.02 E-value=3.2e+02 Score=27.76 Aligned_cols=77 Identities=12% Similarity=-0.080 Sum_probs=53.0
Q ss_pred eeechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-ch-----HHHHHHHHhh
Q 015313 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SV-----RGIWQRWRES 258 (409)
Q Consensus 188 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~-----~~~~~~~~~~ 258 (409)
-.+|++.+...+..+...+ +..++|++...++-.. ..+..+++++..|+..+..+.. +. +.+...
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~---- 152 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHL---- 152 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHH----
Confidence 4789999988777766544 6788999998888553 3334588899999999887653 21 444444
Q ss_pred cCCCCCCccccceeeecc
Q 015313 259 YPVNGNRAGEAITAFTGV 276 (409)
Q Consensus 259 ~~~~~~i~~~~vt~~~~~ 276 (409)
++..++..++..
T Consensus 153 ------l~~~~~~~vi~~ 164 (624)
T PRK12582 153 ------FDLVKPRVVFAQ 164 (624)
T ss_pred ------HHhcCCcEEEec
Confidence 444566666654
No 308
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=24.82 E-value=4.8e+02 Score=22.97 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=36.8
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhh------C--cEEEeCCCCC---ChHHHHHHHhcCCceEEEec
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFS------G--CIAVPLALSY---PESELLHVMHDSDISMVLST 122 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~------G--~~~~~i~~~~---~~~~~~~~l~~~~~~~vi~~ 122 (409)
-+.+|++|+|-..=+.|+++++..+... + ..++-++... +.+.+..+.++.+..+.+.+
T Consensus 25 li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~~ 94 (258)
T PRK10696 25 MIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIEE 94 (258)
T ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEEE
Confidence 3578999999999999999887766442 2 3444444432 23334455555555555544
No 309
>PRK08197 threonine synthase; Validated
Probab=24.61 E-value=5.6e+02 Score=24.32 Aligned_cols=55 Identities=11% Similarity=-0.170 Sum_probs=35.7
Q ss_pred EEEEeCCCHHHHHHHHHHHhhCcEEEeC-CCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 71 V~l~~~~~~~~~~~~~A~~~~G~~~~~i-~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
.++.....-.-..+.+++..+|.-+..+ +...++ .....++..+++++.++.++.
T Consensus 129 ~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~-~k~~~~~~~GA~Vi~v~~~~~ 184 (394)
T PRK08197 129 HLAMPTNGNAGAAWAAYAARAGIRATIFMPADAPE-ITRLECALAGAELYLVDGLIS 184 (394)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCH-HHHHHHHHcCCEEEEECCCHH
Confidence 3444455555666666777778754444 444444 456788999999999986543
No 310
>COG4006 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.45 E-value=4.3e+02 Score=23.04 Aligned_cols=54 Identities=15% Similarity=0.009 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHHHHHHHHHhhCcEE
Q 015313 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIA 95 (409)
Q Consensus 28 Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~~~~~A~~~~G~~~ 95 (409)
.+++|+.....+.+.+...+.. ..++|..|-|..-.. +|..++.+|...+|+-.
T Consensus 125 ~~g~fyeGLsdL~~~v~~di~~--------------~~~~gn~vyinaTgGfKPES~fltLagsLaGa~~ 180 (278)
T COG4006 125 VFGRFYEGLSDLVREVYCDIKV--------------RIGRGNVVYINATGGFKPESGFLTLAGSLAGASA 180 (278)
T ss_pred chhHHHHHHHHHHHHHHHHhhe--------------eccCCceEEEecCCCCCchHHHHHHHHHHcCCce
Confidence 4667887777777777664321 456788888887766 99999999999999973
No 311
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=24.41 E-value=2.2e+02 Score=20.19 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=22.7
Q ss_pred eEEEeCCc------cccHHHHHH-HHHHHHHHHhhCCC
Q 015313 18 VAIRADQK------SYSYDQLAS-SALRISSLLCSNDL 48 (409)
Q Consensus 18 ~a~~~~~~------~~Ty~~l~~-~~~~~a~~L~~~~~ 48 (409)
+|++++++ +++-.||.+ ++.+++..|.++|+
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv 53 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGV 53 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT-
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCc
Confidence 35556553 566678777 99999999999854
No 312
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=24.33 E-value=7.5e+02 Score=24.99 Aligned_cols=100 Identities=9% Similarity=-0.076 Sum_probs=60.6
Q ss_pred CCCeeEEEe---------CCccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCC--HHHH
Q 015313 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (409)
Q Consensus 14 ~~~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~--~~~~ 82 (409)
.++.+|++. ++-.+|++.+...+......+.. .-..++++...+|-+ ..+.
T Consensus 207 ~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~------------------~~~~~~~~l~~lPl~h~~g~~ 268 (614)
T PRK08180 207 GPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPF------------------LAEEPPVLVDWLPWNHTFGGN 268 (614)
T ss_pred CcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccc------------------cCCCCcEEEEecchHHHhhHH
Confidence 356666654 23478998888776665544421 111456666666632 2334
Q ss_pred HHHHHHHhhCcEEEeCCCCCChH---HHHHHHhcCCceEEEechhHHHHHHH
Q 015313 83 AGVLGTWFSGCIAVPLALSYPES---ELLHVMHDSDISMVLSTEDYREVLQN 131 (409)
Q Consensus 83 ~~~~A~~~~G~~~~~i~~~~~~~---~~~~~l~~~~~~~vi~~~~~~~~~~~ 131 (409)
..++.++..|+.++..+...++. ++-..+++.++.++..-+..+..+..
T Consensus 269 ~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~ 320 (614)
T PRK08180 269 HNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVP 320 (614)
T ss_pred HHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHH
Confidence 45667778888877654333333 45556788999999988876655543
No 313
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.26 E-value=4e+02 Score=26.46 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=56.1
Q ss_pred eechHHHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCc-chHHHHHHHHhhcCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNG 263 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~-~~~~~~~~~~~~~~~~~ 263 (409)
.+|+..+......+...+ +...++++....+-.. .+...+++++..|+..+.++.. ....+...
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~--------- 116 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQ--------- 116 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHH---------
Confidence 678888887776665543 5678888888876653 3345578899999999988764 44444444
Q ss_pred CCccccceeeecchHHHH
Q 015313 264 NRAGEAITAFTGVPTMYT 281 (409)
Q Consensus 264 ~i~~~~vt~~~~~P~~l~ 281 (409)
+++.+++.++..+....
T Consensus 117 -l~~~~~~~ii~~~~~~~ 133 (560)
T PRK08974 117 -LNDSGAKAIVIVSNFAH 133 (560)
T ss_pred -HHhcCceEEEEeccccH
Confidence 66677888877665433
No 314
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=24.24 E-value=6.7e+02 Score=24.40 Aligned_cols=70 Identities=6% Similarity=0.001 Sum_probs=44.5
Q ss_pred CCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC-------CCChHHHHHHHhcC--CceEEEe---------chhHHHH
Q 015313 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-------SYPESELLHVMHDS--DISMVLS---------TEDYREV 128 (409)
Q Consensus 67 ~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~-------~~~~~~~~~~l~~~--~~~~vi~---------~~~~~~~ 128 (409)
+|+.|+ +..++ +....-|+..+|+.++.+++ ..+.+.+...++.. +..+++. ..+..+.
T Consensus 150 ~gd~VI-~p~~t--h~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~e 226 (444)
T TIGR03531 150 KAKYVI-WPRID--QKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEE 226 (444)
T ss_pred CCCEEE-EECcC--hHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHH
Confidence 477554 44444 88888999999998888873 44777888888753 3344443 2344555
Q ss_pred HHHHhhccCCc
Q 015313 129 LQNVASKSGAK 139 (409)
Q Consensus 129 ~~~~~~~~~~~ 139 (409)
+.++.++.+..
T Consensus 227 Ia~la~k~gI~ 237 (444)
T TIGR03531 227 IAKICANYDIP 237 (444)
T ss_pred HHHHHHHcCCE
Confidence 55555554443
No 315
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=24.13 E-value=3.8e+02 Score=25.72 Aligned_cols=77 Identities=14% Similarity=0.026 Sum_probs=52.5
Q ss_pred eechHHHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccCcchHHHHHHHHhhcCCCCCC
Q 015313 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNR 265 (409)
Q Consensus 189 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~i 265 (409)
.+|++.+...+..+...+ +..+++++....+-.... +..+++++..|+..+..+...+.+....+ +
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~---------~ 96 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPET--LLAYLALLQCGARVLPLNPQLPQPLLEEL---------L 96 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCEEeecCCCCCHHHHHHH---------H
Confidence 589999988877776544 677889988887776543 34578889999999988764443333333 4
Q ss_pred ccccceeeecc
Q 015313 266 AGEAITAFTGV 276 (409)
Q Consensus 266 ~~~~vt~~~~~ 276 (409)
++.++.+++..
T Consensus 97 ~~~~~~~~i~~ 107 (458)
T PRK09029 97 PSLTLDFALVL 107 (458)
T ss_pred HhcCCCEEEEc
Confidence 44566666543
No 316
>PRK09192 acyl-CoA synthetase; Validated
Probab=24.11 E-value=5.5e+02 Score=25.63 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=59.3
Q ss_pred eeeechHHHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHhcCCEEEEccC-cc-------hHHHHHHH
Q 015313 187 GVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FS-------VRGIWQRW 255 (409)
Q Consensus 187 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~i~~~~~-~~-------~~~~~~~~ 255 (409)
.-.+|++.+...+..+... .+..++|++...++.+--. +..+++++..|+..+.++. +. .+.+...
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~- 123 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF--VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM- 123 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH--HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHH-
Confidence 3568999988766666554 3678899999888885433 3457889999999988853 11 3444444
Q ss_pred HhhcCCCCCCccccceeeecchHHHHHHH
Q 015313 256 RESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (409)
Q Consensus 256 ~~~~~~~~~i~~~~vt~~~~~P~~l~~l~ 284 (409)
+++.++..++........+.
T Consensus 124 ---------i~~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 124 ---------LASAQPAAIITPDELLPWVN 143 (579)
T ss_pred ---------HHhcCCCEEEeChHHHHHHH
Confidence 66678888888776655443
No 317
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=24.08 E-value=3.7e+02 Score=25.46 Aligned_cols=59 Identities=10% Similarity=-0.051 Sum_probs=41.2
Q ss_pred CEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHH
Q 015313 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (409)
Q Consensus 69 ~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 127 (409)
..-.+....+-.-..+.+++...|.-+..+-|...+......++..++++++++..+.+
T Consensus 94 ~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 94 QATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 44456666667777778888889986555444444455666778999999999875444
No 318
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=23.82 E-value=2.8e+02 Score=24.32 Aligned_cols=76 Identities=17% Similarity=0.370 Sum_probs=45.2
Q ss_pred EEEEEeCCCHHHHHHHHHHHhhCcE-EEeCCCCCChHHHH---HHHhcCCceEEEechhHHHH-HHHHhhccCCceeccC
Q 015313 70 RIGIVAKPSFEFVAGVLGTWFSGCI-AVPLALSYPESELL---HVMHDSDISMVLSTEDYREV-LQNVASKSGAKFSLIP 144 (409)
Q Consensus 70 ~V~l~~~~~~~~~~~~~A~~~~G~~-~~~i~~~~~~~~~~---~~l~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~ 144 (409)
+..+..-+...++.-.+++-..+.. ..+ ....++.++. ..+++.++++||+++...+. ...+.++.+.....+.
T Consensus 151 ~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~~e~~~~~~~~~~la~~~g~~vv~ld 229 (256)
T PF01297_consen 151 RPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIFTEPQFSSKLAEALAKETGVKVVYLD 229 (256)
T ss_dssp GEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEEEETTS-THHHHHHHHCCT-EEEESS
T ss_pred CeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEEecCCCChHHHHHHHHHcCCcEEEeC
Confidence 6667788888888888877666655 111 2334555544 55688999999998765543 4445566666655444
Q ss_pred CC
Q 015313 145 PV 146 (409)
Q Consensus 145 ~~ 146 (409)
..
T Consensus 230 ~l 231 (256)
T PF01297_consen 230 PL 231 (256)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 319
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=23.81 E-value=4e+02 Score=25.77 Aligned_cols=59 Identities=8% Similarity=-0.102 Sum_probs=41.5
Q ss_pred EEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 71 V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
-.+.....-.-....+++...|.-+..+-|...+......++..++++++++.++....
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~ 212 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAV 212 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 44555556667777788888887555554444555567788999999999998765443
No 320
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=23.57 E-value=1.8e+02 Score=26.21 Aligned_cols=85 Identities=13% Similarity=0.168 Sum_probs=48.3
Q ss_pred hccceEEEeeCCC--CCHHHHHHHHHHhCCccccccccccccccccccCCCCCCccccccccCCeEEEEeeCCCCCC-CC
Q 015313 302 AKQLRLMMCGSSA--LPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSD-AA 378 (409)
Q Consensus 302 ~~~lr~v~~gG~~--~~~~~~~~~~~~~~~~v~~~YG~tE~g~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~~~~~-~~ 378 (409)
+.+|=.-++|++. -..++.+.|++.|+-..=+.|=++++-+.......+ ...+.+=..--|...+.+++||... +.
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t~g-~~~GiVLiaGTgs~crl~~~DGs~~~~g 146 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAATPG-GEGGIVLIAGTGSNCRLVNPDGSEKGAG 146 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhcCCC-CCCcEEEEecCCceeEEECCCCCccCCC
Confidence 4445455555543 223566677777765556688899987655433221 1222332333567789999998765 44
Q ss_pred ccceEEEeC
Q 015313 379 GVGEICVKS 387 (409)
Q Consensus 379 ~~Gel~v~g 387 (409)
|.|.+.=.+
T Consensus 147 gwg~~iGd~ 155 (336)
T KOG1794|consen 147 GWGHMIGDG 155 (336)
T ss_pred CCCCccCCC
Confidence 466655443
No 321
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=23.50 E-value=72 Score=23.37 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=22.4
Q ss_pred ccccccCCeEEEEee-CCCCCCCCc----cceEEEeC
Q 015313 356 TVGNPLPGVQVKIAE-DESGSDAAG----VGEICVKS 387 (409)
Q Consensus 356 ~~G~p~~~~~~~ivd-~~~~~~~~~----~Gel~v~g 387 (409)
+-|+|++|+++++.| .+++.+..+ -|...+..
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~ 59 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDS 59 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecC
Confidence 459999999999999 776654322 35555544
No 322
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=23.11 E-value=1.5e+02 Score=27.22 Aligned_cols=32 Identities=13% Similarity=-0.099 Sum_probs=28.5
Q ss_pred ccCCCCCEEEEEeCCCHHHHHHHHHHHhhCcE
Q 015313 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~ 94 (409)
+|+.+++.|+++|.........++++..+|..
T Consensus 264 ~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 264 EGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 48889999999999999998899999999964
No 323
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=22.98 E-value=5.6e+02 Score=24.74 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=41.2
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
.+|+.| +.+..+-.-..+.++|...|..+..+-|...+.+....++..++++++++.
T Consensus 60 ~~g~~v-v~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 60 KPGDTI-IEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CCCCEE-EEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 567664 445666777788888899998666554443445566788999999999975
No 324
>PRK06721 threonine synthase; Reviewed
Probab=22.97 E-value=5.7e+02 Score=23.85 Aligned_cols=57 Identities=7% Similarity=-0.076 Sum_probs=37.5
Q ss_pred EEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC-CChHHHHHHHhcCCceEEEechhHHH
Q 015313 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-YPESELLHVMHDSDISMVLSTEDYRE 127 (409)
Q Consensus 71 V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~-~~~~~~~~~l~~~~~~~vi~~~~~~~ 127 (409)
..+....+-.-..+.+++...|.-+..+-|. ..+......++..++++++++.++..
T Consensus 77 ~vV~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 77 AIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDD 134 (352)
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 3444455556677777888889865555443 33444455788999999999875443
No 325
>PRK05638 threonine synthase; Validated
Probab=22.93 E-value=3.7e+02 Score=26.02 Aligned_cols=57 Identities=16% Similarity=-0.038 Sum_probs=37.9
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeC-CCCCChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i-~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
++....+-.-..+.+.+..+|.-+..+ +...+ ......++..+++++.++.++.+..
T Consensus 115 vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~-~~k~~~~~~~GA~vi~v~~~~~~~~ 172 (442)
T PRK05638 115 FIVASDGNAAASVAAYSARAGKEAFVVVPRKVD-KGKLIQMIAFGAKIIRYGESVDEAI 172 (442)
T ss_pred EEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCC-HHHHHHHHhcCcEEEEECCCHHHHH
Confidence 344555666666667777888755544 44444 4456678999999999987654443
No 326
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=22.80 E-value=7.2e+02 Score=24.34 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=40.6
Q ss_pred CCeeEEEeCC-ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHHHHHH
Q 015313 15 RDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (409)
Q Consensus 15 ~~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~~~~~ 85 (409)
-+..|+...+ ...+|+++.+-++.++..+.+ -++++..+.+++++..--+.-.
T Consensus 372 ~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~------------------~~~~~~Plivv~e~D~aKvLGq 425 (473)
T PF06277_consen 372 DQPVALALPGKPNPSFAEIQELAEAIAEGMAE------------------LINPDQPLIVVVEQDMAKVLGQ 425 (473)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHh------------------hccCCCCEEEEECchHHHHHHH
Confidence 3556776654 589999999999999999987 4677888888888875555443
No 327
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.74 E-value=5.3e+02 Score=23.20 Aligned_cols=70 Identities=11% Similarity=0.239 Sum_probs=40.1
Q ss_pred CEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHH---HHHhcCCceEEEechhHHH-HHHHHhhccCC
Q 015313 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELL---HVMHDSDISMVLSTEDYRE-VLQNVASKSGA 138 (409)
Q Consensus 69 ~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~---~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~ 138 (409)
++..+..-+...++.-.+++-..+..-+--....++.++. ..+++.+.++||+++.... ..+.+.++.+.
T Consensus 179 ~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 179 TKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred CCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 5556667778887776666544332211112344555544 4556889999999876543 34444444443
No 328
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.71 E-value=3.5e+02 Score=20.56 Aligned_cols=39 Identities=10% Similarity=0.101 Sum_probs=32.9
Q ss_pred HHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 85 ~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
.......|.-++.+.+..+.+++.....+.+|++|+...
T Consensus 20 ~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 20 ARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 334556688999999999999999999999999998764
No 329
>PRK05939 hypothetical protein; Provisional
Probab=22.60 E-value=4.4e+02 Score=25.08 Aligned_cols=56 Identities=7% Similarity=-0.136 Sum_probs=28.9
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEec
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST 122 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~ 122 (409)
+++||+|++.-+.-......+-++...|+.+..++.. +.+++...++. +.++|+++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 5678877664332222222223345567777666543 45556655533 45555553
No 330
>PRK08329 threonine synthase; Validated
Probab=22.56 E-value=6.3e+02 Score=23.49 Aligned_cols=53 Identities=8% Similarity=0.001 Sum_probs=32.9
Q ss_pred EeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 74 ~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
....+-.-..+.+++..+|.-+..+-|...+......++..++++++++.+..
T Consensus 109 ~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~~~ 161 (347)
T PRK08329 109 IDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEGDRM 161 (347)
T ss_pred EECCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCHH
Confidence 33344445555566667777544443333444456678999999999986543
No 331
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=22.36 E-value=7e+02 Score=24.09 Aligned_cols=85 Identities=22% Similarity=0.161 Sum_probs=58.9
Q ss_pred ccccHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEeCCCHHH-HHHHHHHHhhCcEEEeCCCC--
Q 015313 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALS-- 101 (409)
Q Consensus 25 ~~~Ty~~l~~~~~~~a~~L~~~~~~~~~~~~~~~~~~~~g~~~g~~V~l~~~~~~~~-~~~~~A~~~~G~~~~~i~~~-- 101 (409)
-.+|++.+...+...+..+ ++..++++....+.+... +...++.+..|...+..+..
T Consensus 161 v~~t~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~ 220 (503)
T PRK04813 161 VQISHDNLVSFTNWMLEDF--------------------ALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMT 220 (503)
T ss_pred EEeehHHHHHHHHHHHHHc--------------------CCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhh
Confidence 4788888887666555442 667788887777755332 34455677888887776543
Q ss_pred CChHHHHHHHhcCCceEEEechhHHHHH
Q 015313 102 YPESELLHVMHDSDISMVLSTEDYREVL 129 (409)
Q Consensus 102 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (409)
.+...+...+++.++..+...+.....+
T Consensus 221 ~~~~~~~~~~~~~~~t~~~~~p~~~~~~ 248 (503)
T PRK04813 221 ANFKQLFETLPQLPINVWVSTPSFADMC 248 (503)
T ss_pred cCHHHHHHHHHHcCCeEEEeChHHHHHH
Confidence 3566777788999999998888766543
No 332
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=21.99 E-value=3.1e+02 Score=25.38 Aligned_cols=53 Identities=13% Similarity=0.087 Sum_probs=24.9
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC----CCChHHHHHHHhcCCceEEEe
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL----SYPESELLHVMHDSDISMVLS 121 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~----~~~~~~~~~~l~~~~~~~vi~ 121 (409)
++||.|++-.|.-. ....++...|+.+++++. ..+.+.+...+...++++++.
T Consensus 103 ~~gd~vlv~~P~y~---~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l 159 (356)
T PRK04870 103 KPGATVLAPEPGFV---MYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFL 159 (356)
T ss_pred CCCCEEEECCCCHH---HHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEE
Confidence 56666665544322 223345555655554432 233445555554444554443
No 333
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=21.96 E-value=5.3e+02 Score=23.10 Aligned_cols=56 Identities=16% Similarity=0.046 Sum_probs=42.3
Q ss_pred CCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechh
Q 015313 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (409)
Q Consensus 68 g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~ 124 (409)
++.| +....+-.-..+.++|...|.-++.+-|...+......++..+++++.+..+
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 4555 7777777788888888888987766655556666777889999999977653
No 334
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=21.89 E-value=6.3e+02 Score=23.24 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=44.2
Q ss_pred ccCCCCCEEEEEeCCC-HHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEe--chhHHHHHHHHhh
Q 015313 63 LAGGCGARIGIVAKPS-FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS--TEDYREVLQNVAS 134 (409)
Q Consensus 63 ~g~~~g~~V~l~~~~~-~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~--~~~~~~~~~~~~~ 134 (409)
.++++|++|++....+ +-.++..+|-.+-..+++.. .+.++.. ++.+..++.+|. +++..+.+.+...
T Consensus 138 ~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~---~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~ 208 (326)
T COG0604 138 AGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVV---SSSEKLE-LLKELGADHVINYREEDFVEQVRELTG 208 (326)
T ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEe---cCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcC
Confidence 5789999999999766 55665555544432333332 2445566 889999999997 3345555555433
No 335
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=21.27 E-value=1.1e+02 Score=29.34 Aligned_cols=38 Identities=11% Similarity=0.147 Sum_probs=32.8
Q ss_pred hccceEEEeeCCCCCHHHHHHHHHHhCCccccccccccc
Q 015313 302 AKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEF 340 (409)
Q Consensus 302 ~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~ 340 (409)
.+..|.+.+||+.....+...+.+.||++|++. +..+.
T Consensus 441 ~~~~rilvtGGAS~N~~Ilq~iadVf~apVy~~-~~~~s 478 (545)
T KOG2531|consen 441 NPPTRILVTGGASRNEAILQIIADVFGAPVYTI-EGPNS 478 (545)
T ss_pred CCCceEEEecCccccHHHHHHHHHHhCCCeEee-cCCch
Confidence 367899999999999999999999999999987 44443
No 336
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=21.18 E-value=4.9e+02 Score=23.71 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=34.4
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhc----CCceEEEec
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHD----SDISMVLST 122 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~----~~~~~vi~~ 122 (409)
.++||.|++-- +.+.....++...|+.+++++ ..+.+++..+++. .++.++++.
T Consensus 82 ~~~gd~Vl~~~---~~~~~~~~~~~~~g~~~~~~~-~~~~~~le~~i~~~~~~~~~~~v~~~ 139 (349)
T cd06454 82 AGKGDLIISDS---LNHASIIDGIRLSGAKKRIFK-HNDMEDLEKLLREARRPYGKKLIVTE 139 (349)
T ss_pred cCCCCEEEEeh---hhhHHHHHHHHHcCCceEEec-CCCHHHHHHHHHHhhccCCCeEEEEe
Confidence 47899887643 344444556677888777664 3456677877765 345666654
No 337
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=21.10 E-value=2.6e+02 Score=25.85 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=28.6
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCC----CChHHHHHHHhcCCceEEEe
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS----YPESELLHVMHDSDISMVLS 121 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~----~~~~~~~~~l~~~~~~~vi~ 121 (409)
+++||.|++--| ++. ....++...|+.+++++.. .+.+.+...+...++++++.
T Consensus 97 ~~~gd~Vlv~~p-~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l 154 (351)
T PRK14807 97 INKGDVVIYPHP-SFA--MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFL 154 (351)
T ss_pred cCCCCEEEEeCC-ChH--HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEE
Confidence 467887776543 322 2334455667665555332 34455555555445565553
No 338
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=21.07 E-value=6.2e+02 Score=22.81 Aligned_cols=58 Identities=16% Similarity=-0.025 Sum_probs=41.9
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEech
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~ 123 (409)
+.+|+.|+- ...+-.-..+.++|...|.-+..+-|...+......++..++++++++.
T Consensus 56 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 56 IKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred CCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 366775544 5666677777788888998666665544455566789999999999875
No 339
>PRK02991 D-serine dehydratase; Provisional
Probab=20.97 E-value=5e+02 Score=25.20 Aligned_cols=57 Identities=9% Similarity=-0.113 Sum_probs=39.3
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHH
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
.+.....-.-..+.+++...|.-+..+-|...+......++..++++++++.++...
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a 216 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVA 216 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 445555666777778888889755544344444555666899999999998765544
No 340
>PLN02409 serine--glyoxylate aminotransaminase
Probab=20.85 E-value=5.1e+02 Score=24.57 Aligned_cols=58 Identities=9% Similarity=-0.079 Sum_probs=30.5
Q ss_pred cCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCC----CCChHHHHHHHhc---CCceEEEec
Q 015313 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL----SYPESELLHVMHD---SDISMVLST 122 (409)
Q Consensus 64 g~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~----~~~~~~~~~~l~~---~~~~~vi~~ 122 (409)
-+++||.|++..+..+.... ...+.+.|+.++.++. ..+.+++...++. .+.++|+..
T Consensus 80 ~~~~Gd~Vlv~~~~~~~~~~-~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~ 144 (401)
T PLN02409 80 TLSPGDKVVSFRIGQFSLLW-IDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVV 144 (401)
T ss_pred cCCCCCEEEEeCCCchhHHH-HHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEE
Confidence 45788887776654433222 2334455654444432 2356667666664 245655553
No 341
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=20.77 E-value=7.5e+02 Score=23.66 Aligned_cols=55 Identities=16% Similarity=0.063 Sum_probs=42.9
Q ss_pred EEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHH
Q 015313 70 RIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (409)
Q Consensus 70 ~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 126 (409)
.|+--.-| ....+.+|+.++|..+..+=|..++...-..++..++.+++.-++..
T Consensus 117 ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~d 171 (457)
T KOG1250|consen 117 VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWD 171 (457)
T ss_pred eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHH
Confidence 34444444 47778899999999877777778888888889999999999877543
No 342
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=20.61 E-value=6.3e+02 Score=24.31 Aligned_cols=55 Identities=11% Similarity=-0.012 Sum_probs=45.4
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEE--eCCCCCChHHHHHHHhcCCceEEE
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAV--PLALSYPESELLHVMHDSDISMVL 120 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~--~i~~~~~~~~~~~~l~~~~~~~vi 120 (409)
-+|-+|+.+..-..+..+....+..+|+-+. ..||..+.+++...|...+..+.=
T Consensus 34 ~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~a 90 (413)
T cd00401 34 LKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVFA 90 (413)
T ss_pred CCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEEE
Confidence 5689999999999999999999999998654 336777888888888887777655
No 343
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=20.59 E-value=3.4e+02 Score=24.23 Aligned_cols=56 Identities=11% Similarity=-0.064 Sum_probs=43.4
Q ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEE--eCCCCCChHHHHHHHhcCCceEEE
Q 015313 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV--PLALSYPESELLHVMHDSDISMVL 120 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~--~i~~~~~~~~~~~~l~~~~~~~vi 120 (409)
--+|-+|+.++--..+..+....+..+|+-+. -.||..+.+++..-|...+..+.-
T Consensus 40 Pl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A 97 (268)
T PF05221_consen 40 PLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFA 97 (268)
T ss_dssp TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEE
Confidence 35699999999999999999999999999665 558888999998888888876654
No 344
>PRK09224 threonine dehydratase; Reviewed
Probab=20.44 E-value=7.6e+02 Score=24.48 Aligned_cols=56 Identities=16% Similarity=0.033 Sum_probs=39.4
Q ss_pred EEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHH
Q 015313 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (409)
Q Consensus 72 ~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 127 (409)
.+.+..+-.-....+++...|..++.+-|...+......++..+++++++..++.+
T Consensus 71 vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~~~~ 126 (504)
T PRK09224 71 VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFDE 126 (504)
T ss_pred EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 34455666777778888899986655544445555566789999999999865443
No 345
>PLN02356 phosphateglycerate kinase
Probab=20.34 E-value=6.8e+02 Score=24.15 Aligned_cols=56 Identities=7% Similarity=-0.076 Sum_probs=38.6
Q ss_pred CCCCEEEEEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEec
Q 015313 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST 122 (409)
Q Consensus 66 ~~g~~V~l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~ 122 (409)
++|..|+ .....-.-+.+.++|...|.-+..+-|...+.+....++..+++++.++
T Consensus 102 ~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 102 FPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred CCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3666544 3444455777778888889866655444445555678999999999985
No 346
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=20.14 E-value=5.2e+02 Score=25.00 Aligned_cols=56 Identities=9% Similarity=0.093 Sum_probs=31.9
Q ss_pred CCCCCEEEEEeCCCHHHHHHH--HHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEec
Q 015313 65 GGCGARIGIVAKPSFEFVAGV--LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST 122 (409)
Q Consensus 65 ~~~g~~V~l~~~~~~~~~~~~--~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~ 122 (409)
+++||+|++.. +.+.....+ ..+...|+.+..++...+.+++...++. +.++|+..
T Consensus 97 l~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 97 CSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred cCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 57788766533 333222222 2245678877777776666777776654 44555553
No 347
>PRK12483 threonine dehydratase; Reviewed
Probab=20.13 E-value=7.8e+02 Score=24.57 Aligned_cols=56 Identities=16% Similarity=0.054 Sum_probs=39.8
Q ss_pred EEeCCCHHHHHHHHHHHhhCcEEEeCCCCCChHHHHHHHhcCCceEEEechhHHHH
Q 015313 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (409)
Q Consensus 73 l~~~~~~~~~~~~~A~~~~G~~~~~i~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 128 (409)
+.+..+-.-....++|...|..+..+-|...+......++..+++++++...+.+.
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a 144 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDA 144 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHH
Confidence 44555666777788888999866655444455555677899999999998765443
No 348
>PRK14057 epimerase; Provisional
Probab=20.07 E-value=4.3e+02 Score=23.44 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=40.5
Q ss_pred CCEEEEEeCCCHHHHHHHHHHHhhCc----------EEEeCCCCCChHHHHHHHhcCCceEEEec
Q 015313 68 GARIGIVAKPSFEFVAGVLGTWFSGC----------IAVPLALSYPESELLHVMHDSDISMVLST 122 (409)
Q Consensus 68 g~~V~l~~~~~~~~~~~~~A~~~~G~----------~~~~i~~~~~~~~~~~~l~~~~~~~vi~~ 122 (409)
.|.|.++.+.+....-..-.+-..|+ +-+.++|..+.+.+..++...+.-.+.+-
T Consensus 99 ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV 163 (254)
T PRK14057 99 AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAV 163 (254)
T ss_pred CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEE
Confidence 47888888866555555555666675 67778888888999999888877777654
Done!