Your job contains 1 sequence.
>015314
MRGGSLWQLGQSITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWS
MPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTL
TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD
ERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVP
SERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGK
RRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSP
CLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015314
(409 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008900 - symbol:AT1G11860 species:3702 "Arabi... 1882 2.7e-194 1
UNIPROTKB|P49364 - symbol:GDCST "Aminomethyltransferase, ... 1834 3.3e-189 1
ZFIN|ZDB-GENE-041010-114 - symbol:amt "aminomethyltransfe... 1007 1.4e-101 1
UNIPROTKB|I3LIR4 - symbol:AMT "Aminomethyltransferase" sp... 977 2.2e-98 1
RGD|1359408 - symbol:Amt "aminomethyltransferase" species... 975 3.5e-98 1
UNIPROTKB|P25285 - symbol:AMT "Aminomethyltransferase, mi... 960 1.4e-96 1
UNIPROTKB|P48728 - symbol:AMT "Aminomethyltransferase, mi... 956 3.7e-96 1
MGI|MGI:3646700 - symbol:Amt "aminomethyltransferase" spe... 952 9.7e-96 1
UNIPROTKB|Q9TSZ7 - symbol:AMT "Aminomethyltransferase, mi... 949 2.0e-95 1
UNIPROTKB|P28337 - symbol:AMT "Aminomethyltransferase, mi... 948 2.6e-95 1
DICTYBASE|DDB_G0292326 - symbol:gcvT "aminomethyltransfer... 940 1.8e-94 1
UNIPROTKB|H0Y695 - symbol:AMT "Aminomethyltransferase" sp... 896 8.3e-90 1
POMBASE|SPAC31G5.14 - symbol:gcv1 "glycine decarboxylase ... 881 3.2e-88 1
WB|WBGene00017765 - symbol:gcst-1 species:6239 "Caenorhab... 847 1.3e-84 1
FB|FBgn0032287 - symbol:CG6415 species:7227 "Drosophila m... 841 5.6e-84 1
CGD|CAL0006098 - symbol:GCV1 species:5476 "Candida albica... 807 2.2e-80 1
UNIPROTKB|Q5AC31 - symbol:GCV1 "Aminomethyltransferase" s... 807 2.2e-80 1
TIGR_CMR|CPS_3841 - symbol:CPS_3841 "glycine cleavage sys... 761 1.7e-75 1
SGD|S000002426 - symbol:GCV1 "T subunit of the mitochondr... 759 2.7e-75 1
TIGR_CMR|SPO_A0057 - symbol:SPO_A0057 "glycine cleavage s... 758 3.5e-75 1
UNIPROTKB|B4DGG9 - symbol:AMT "Aminomethyltransferase" sp... 757 4.5e-75 1
ASPGD|ASPL0000056788 - symbol:AN1198 species:162425 "Emer... 733 1.6e-72 1
TIGR_CMR|CHY_0489 - symbol:CHY_0489 "glycine cleavage sys... 630 1.3e-61 1
TIGR_CMR|BA_4449 - symbol:BA_4449 "glycine cleavage syste... 581 2.0e-56 1
UNIPROTKB|C9JXJ4 - symbol:AMT "Aminomethyltransferase, mi... 576 6.8e-56 1
TIGR_CMR|CPS_1274 - symbol:CPS_1274 "glycine cleavage sys... 558 5.5e-54 1
GENEDB_PFALCIPARUM|PF13_0345 - symbol:PF13_0345 "aminomet... 527 1.1e-50 1
UNIPROTKB|Q8I6T0 - symbol:PF13_0345 "Aminomethyltransfera... 527 1.1e-50 1
TIGR_CMR|CBU_1716 - symbol:CBU_1716 "glycine cleavage sys... 514 2.5e-49 1
TIGR_CMR|GSU_0375 - symbol:GSU_0375 "glycine cleavage sys... 494 3.3e-47 1
UNIPROTKB|P27248 - symbol:gcvT species:83333 "Escherichia... 491 6.9e-47 1
TIGR_CMR|SO_0779 - symbol:SO_0779 "glycine cleavage syste... 451 1.2e-42 1
UNIPROTKB|P64220 - symbol:gcvT "Aminomethyltransferase" s... 419 2.9e-39 1
UNIPROTKB|E1BSV1 - symbol:DMGDH "Uncharacterized protein"... 321 9.1e-28 1
TIGR_CMR|SPO_1562 - symbol:SPO_1562 "glycine cleavage sys... 291 1.1e-25 1
ZFIN|ZDB-GENE-080227-8 - symbol:dmgdh "dimethylglycine de... 291 2.2e-23 1
TIGR_CMR|SPO_2345 - symbol:SPO_2345 "sarcosine oxidase, a... 282 4.7e-22 1
UNIPROTKB|Q9UI17 - symbol:DMGDH "Dimethylglycine dehydrog... 267 2.7e-20 1
MGI|MGI:1921379 - symbol:Dmgdh "dimethylglycine dehydroge... 267 2.7e-20 1
TIGR_CMR|CPS_2480 - symbol:CPS_2480 "sarcosine oxidase, a... 264 7.7e-20 1
TIGR_CMR|CPS_4034 - symbol:CPS_4034 "sarcosine oxidase, a... 264 7.7e-20 1
UNIPROTKB|F1MDJ6 - symbol:DMGDH "Uncharacterized protein"... 263 7.9e-20 1
UNIPROTKB|F1PK75 - symbol:DMGDH "Uncharacterized protein"... 262 8.9e-20 1
UNIPROTKB|F1PKA8 - symbol:DMGDH "Uncharacterized protein"... 262 9.7e-20 1
RGD|620453 - symbol:Dmgdh "dimethylglycine dehydrogenase"... 261 1.3e-19 1
UNIPROTKB|Q63342 - symbol:Dmgdh "Dimethylglycine dehydrog... 261 1.3e-19 1
TIGR_CMR|SPO_1913 - symbol:SPO_1913 "aminomethyl transfer... 248 2.3e-19 1
UNIPROTKB|F1NBJ7 - symbol:SARDH "Uncharacterized protein"... 254 1.1e-18 2
UNIPROTKB|Q4K4P9 - symbol:soxA "Sarcosine oxidase, alpha ... 254 1.1e-18 1
UNIPROTKB|Q48CP0 - symbol:soxA "Sarcosine oxidase, alpha ... 249 4.3e-18 1
TIGR_CMR|SPO_A0311 - symbol:SPO_A0311 "FAD dependent oxid... 245 8.5e-18 1
TIGR_CMR|SPO_3396 - symbol:SPO_3396 "FAD dependent oxidor... 244 1.2e-17 1
ASPGD|ASPL0000076695 - symbol:AN8654 species:162425 "Emer... 238 7.2e-17 1
TIGR_CMR|SPO_0207 - symbol:SPO_0207 "aminomethyl transfer... 236 9.4e-17 1
ZFIN|ZDB-GENE-040426-996 - symbol:sardh "sarcosine dehydr... 236 1.2e-16 1
UNIPROTKB|E1BB28 - symbol:SARDH "Uncharacterized protein"... 235 2.3e-16 2
TIGR_CMR|SPO_1586 - symbol:SPO_1586 "sarcosine oxidase, a... 222 4.9e-15 1
UNIPROTKB|E2R5G7 - symbol:SARDH "Uncharacterized protein"... 217 8.7e-15 2
UNIPROTKB|F1RF50 - symbol:DMGDH "Uncharacterized protein"... 223 1.6e-14 2
TIGR_CMR|SPO_1592 - symbol:SPO_1592 "aminomethyl transfer... 215 2.2e-14 1
UNIPROTKB|F1S0R9 - symbol:SARDH "Uncharacterized protein"... 212 3.3e-14 2
UNIPROTKB|B4DPI2 - symbol:SARDH "Sarcosine dehydrogenase,... 210 7.1e-14 1
UNIPROTKB|Q9UL12 - symbol:SARDH "Sarcosine dehydrogenase,... 210 1.5e-13 2
FB|FBgn0029706 - symbol:CG3626 species:7227 "Drosophila m... 208 1.7e-13 1
TIGR_CMR|SPO_1628 - symbol:SPO_1628 "aminomethyl transfer... 207 1.7e-13 1
TIGR_CMR|SPO_1648 - symbol:SPO_1648 "aminomethyl transfer... 199 2.4e-13 1
TIGR_CMR|SPO_2436 - symbol:SPO_2436 "FAD dependent oxidor... 208 5.8e-13 2
TIGR_CMR|SPO_1579 - symbol:SPO_1579 "aminomethyl transfer... 196 6.2e-13 1
MGI|MGI:2183102 - symbol:Sardh "sarcosine dehydrogenase" ... 198 1.7e-12 2
UNIPROTKB|D4A9I9 - symbol:Sardh "Sarcosine dehydrogenase,... 200 2.6e-12 2
RGD|621125 - symbol:Sardh "sarcosine dehydrogenase" speci... 198 4.4e-12 2
UNIPROTKB|Q64380 - symbol:Sardh "Sarcosine dehydrogenase,... 198 4.4e-12 2
TIGR_CMR|SPO_1746 - symbol:SPO_1746 "sarcosine oxidase, a... 194 6.4e-12 1
WB|WBGene00013718 - symbol:Y106G6H.5 species:6239 "Caenor... 193 6.8e-12 1
TIGR_CMR|SPO_0635 - symbol:SPO_0635 "aminomethyl transfer... 191 1.1e-11 1
UNIPROTKB|B4E1J9 - symbol:DMGDH "cDNA FLJ50354, highly si... 183 2.1e-11 1
FB|FBgn0034276 - symbol:CG6385 species:7227 "Drosophila m... 192 2.6e-11 2
TIGR_CMR|SPO_3400 - symbol:SPO_3400 "aminomethyl transfer... 187 3.4e-11 2
UNIPROTKB|F8W6P8 - symbol:DMGDH "Dimethylglycine dehydrog... 183 4.6e-11 1
UNIPROTKB|Q8TCC6 - symbol:DMGDH "Dimethylglycine dehydrog... 183 5.2e-11 1
TIGR_CMR|SPO_0564 - symbol:SPO_0564 "aminomethyl transfer... 184 6.2e-11 1
UNIPROTKB|F1NG59 - symbol:PDPR "Uncharacterized protein" ... 181 1.5e-10 1
UNIPROTKB|A8MT40 - symbol:PDPR "Pyruvate dehydrogenase ph... 178 2.7e-10 1
UNIPROTKB|Q8NCN5 - symbol:PDPR "Pyruvate dehydrogenase ph... 178 3.2e-10 1
UNIPROTKB|D4A8Z7 - symbol:Sardh "Sarcosine dehydrogenase,... 162 3.9e-10 2
TAIR|locus:2206051 - symbol:AT1G60990 species:3702 "Arabi... 167 1.7e-09 1
UNIPROTKB|F1P7E6 - symbol:PDPR "Uncharacterized protein" ... 171 1.8e-09 1
RGD|1308307 - symbol:Pdpr "pyruvate dehydrogenase phospha... 171 1.9e-09 1
MGI|MGI:2442188 - symbol:Pdpr "pyruvate dehydrogenase pho... 170 2.5e-09 1
UNIPROTKB|F1S433 - symbol:LOC100525224 "Uncharacterized p... 163 7.0e-09 1
UNIPROTKB|F1N4M3 - symbol:PDPR "Pyruvate dehydrogenase ph... 165 8.8e-09 1
UNIPROTKB|Q5SYV2 - symbol:SARDH "Sarcosine dehydrogenase,... 154 1.2e-08 2
TIGR_CMR|SPO_A0310 - symbol:SPO_A0310 "aminomethyl transf... 163 1.3e-08 1
TIGR_CMR|SPO_A0063 - symbol:SPO_A0063 "FAD dependent oxid... 160 1.7e-08 2
UNIPROTKB|O46504 - symbol:PDPR "Pyruvate dehydrogenase ph... 160 3.1e-08 1
ZFIN|ZDB-GENE-040426-1220 - symbol:ypel5 "yippee-like 5" ... 150 1.3e-07 1
WB|WBGene00021355 - symbol:Y37E3.17 species:6239 "Caenorh... 151 2.8e-07 1
UNIPROTKB|H3BUH3 - symbol:PDPR "Pyruvate dehydrogenase ph... 133 6.5e-07 1
UNIPROTKB|H3BV59 - symbol:PDPR "Pyruvate dehydrogenase ph... 118 1.7e-06 1
UNIPROTKB|B7ZAR9 - symbol:PDPR "cDNA, FLJ79283, highly si... 133 2.3e-06 1
WARNING: Descriptions of 3 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2008900 [details] [associations]
symbol:AT1G11860 species:3702 "Arabidopsis thaliana"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA;RCA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0007389 "pattern specification process" evidence=RCA]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009926 "auxin polar
transport" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0046686 GO:GO:0009570
GO:GO:0008483 GO:GO:0016020 GO:GO:0048046 GO:GO:0009941
EMBL:AC002131 GO:GO:0009534 GO:GO:0022626 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 EMBL:AY125509 EMBL:BT006361 EMBL:Z26545
IPI:IPI00538278 PIR:H86252 RefSeq:NP_001184969.1 RefSeq:NP_172650.1
RefSeq:NP_849646.1 UniGene:At.47506 ProteinModelPortal:O65396
SMR:O65396 STRING:O65396 SWISS-2DPAGE:O65396 PaxDb:O65396
PRIDE:O65396 ProMEX:O65396 EnsemblPlants:AT1G11860.1
EnsemblPlants:AT1G11860.2 EnsemblPlants:AT1G11860.3 GeneID:837733
KEGG:ath:AT1G11860 GeneFarm:1742 TAIR:At1g11860 eggNOG:COG0404
HOGENOM:HOG000239380 InParanoid:O65396 OMA:KALYGGM PhylomeDB:O65396
ProtClustDB:PLN02319 Genevestigator:O65396 GermOnline:AT1G11860
TIGRFAMs:TIGR00528 Uniprot:O65396
Length = 408
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 353/409 (86%), Positives = 386/409 (94%)
Query: 1 MRGGSLWQLGQSITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWS 60
MRGGSLWQLGQSITRRLA++DKK ++RR+FAS+A+ LKKTAL+DFHVA+GGKMVPFAGWS
Sbjct: 1 MRGGSLWQLGQSITRRLAQSDKKVVSRRYFASEAD-LKKTALYDFHVAHGGKMVPFAGWS 59
Query: 61 MPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTL 120
MPIQYKDSIM+ST+NCR+NGSLFDV+HMCGLSLKGKDCVPFLE LV+ADVAGLAPGTG+L
Sbjct: 60 MPIQYKDSIMDSTVNCRENGSLFDVAHMCGLSLKGKDCVPFLETLVVADVAGLAPGTGSL 119
Query: 121 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD 180
TVFTNE GG+IDDSVITKV D+HIYLVVNAGCRDKDLAHIE HMK+F +KGGDVSWHIHD
Sbjct: 120 TVFTNEKGGAIDDSVITKVTDEHIYLVVNAGCRDKDLAHIEEHMKAFKSKGGDVSWHIHD 179
Query: 181 ERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVP 240
ERSLLALQGPLAAPVLQHLTK+DLSKLYFG F+ILDING +CFLTRTGYTGEDGFEISVP
Sbjct: 180 ERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQILDINGSTCFLTRTGYTGEDGFEISVP 239
Query: 241 SERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGK 300
E AVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQH++PVEAGLTWAIGK
Sbjct: 240 DEHAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHISPVEAGLTWAIGK 299
Query: 301 RRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSP 360
RRRAEGGFLGA+ IL+QL +GP +RRVGFF+ GPPARSHS+VHDE GN IGEITSGGFSP
Sbjct: 300 RRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGFSP 359
Query: 361 CLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 409
LKKNIAMGYVKSG HK GTKVKI VRGK Y+G+ITKMPFV TKYYKP+
Sbjct: 360 NLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKPT 408
>UNIPROTKB|P49364 [details] [associations]
symbol:GDCST "Aminomethyltransferase, mitochondrial"
species:3888 "Pisum sativum" [GO:0005960 "glycine cleavage complex"
evidence=IDA] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005960
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 EMBL:X74793 EMBL:Z25861
EMBL:AJ222771 PIR:S38370 PIR:S56661 ProteinModelPortal:P49364
SMR:P49364 IntAct:P49364 PRIDE:P49364 Uniprot:P49364
Length = 408
Score = 1834 (650.7 bits), Expect = 3.3e-189, P = 3.3e-189
Identities = 348/410 (84%), Positives = 377/410 (91%)
Query: 1 MRGGSLWQLGQSITRRLARA-DKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGW 59
MRGG LWQLGQSITRRLA DKK +ARR FA+++E LKKT L+DFHVA+GGKMVPFAGW
Sbjct: 1 MRGG-LWQLGQSITRRLANGGDKKAVARRCFATESE-LKKTVLYDFHVAHGGKMVPFAGW 58
Query: 60 SMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGT 119
SMPIQYKDSIM+STLNCRQNGSLFDVSHMCGLSLKGKD V FLEKLVIADVA LA GTGT
Sbjct: 59 SMPIQYKDSIMDSTLNCRQNGSLFDVSHMCGLSLKGKDVVSFLEKLVIADVAALAHGTGT 118
Query: 120 LTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIH 179
LTVFTNE GG+IDDSVITKV DDH+YLVVNAGCRDKDLAHIE HMK+F AKGGDVSWHIH
Sbjct: 119 LTVFTNEKGGAIDDSVITKVTDDHLYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWHIH 178
Query: 180 DERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISV 239
DERSLLALQGPLAAPVLQHLTK+DLSKLYFGEFR+LDING CFLTRTGYTGEDGFEISV
Sbjct: 179 DERSLLALQGPLAAPVLQHLTKEDLSKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISV 238
Query: 240 PSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIG 299
PSE V+LAKA+LEKSEGK+RLTGLGARDSLRLEAGLCLYGND+EQH+TP+EAGLTWAIG
Sbjct: 239 PSEHGVELAKALLEKSEGKIRLTGLGARDSLRLEAGLCLYGNDLEQHITPIEAGLTWAIG 298
Query: 300 KRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFS 359
KRRRAEGGFLGA+ ILKQL +GP +RRVGF + GPP RSHS++ DE GN IGE+TSGGFS
Sbjct: 299 KRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGFS 358
Query: 360 PCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 409
PCLKKNIA+GYVKSGLHKAGTKVKI +RGK +G +TKMPFVPTKYYKPS
Sbjct: 359 PCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKPS 408
>ZFIN|ZDB-GENE-041010-114 [details] [associations]
symbol:amt "aminomethyltransferase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
ZFIN:ZDB-GENE-041010-114 GO:GO:0005737 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822
EMBL:BC083400 EMBL:DQ104411 IPI:IPI00483251 RefSeq:NP_001006021.1
UniGene:Dr.78748 SMR:Q5XJA4 STRING:Q5XJA4 GeneID:450000
KEGG:dre:450000 InParanoid:Q5XJA4 NextBio:20832983 Uniprot:Q5XJA4
Length = 409
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 202/377 (53%), Positives = 259/377 (68%)
Query: 31 ASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCG 90
AS L+KT L+DFH A+GGKMV FAGWSMP+QYKDS + S ++ RQ+ S+FDVSHM
Sbjct: 34 ASTEVTLRKTPLYDFHRAHGGKMVEFAGWSMPVQYKDSHITSHMHTRQHCSIFDVSHMLQ 93
Query: 91 LSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 150
+ GKD V F+E L++ D+A L GTL++FTN GG +DD ++TK D++Y+V NA
Sbjct: 94 TKVYGKDRVKFIESLIVGDIAELKDNQGTLSLFTNSKGGIMDDLIVTKTDQDYLYVVSNA 153
Query: 151 GCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFG 210
GC DKD AH++A ++ F + G DV +E SL+ALQGP A VLQ DDL KL F
Sbjct: 154 GCADKDSAHMQARLQEFKSAGHDVDLEFMEE-SLIALQGPSMARVLQKGVGDDLKKLTFM 212
Query: 211 EFRILDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDS 269
+ + G+ C +TR GYTGEDG EISVPS+ V L + +L SE V+L GLGARDS
Sbjct: 213 TSVLTPVFGIQGCRVTRCGYTGEDGVEISVPSKDVVLLTEKLLADSE--VKLAGLGARDS 270
Query: 270 LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF 329
LRLEAGLCLYGND+++ TPVEA L W IGKRRR F GA+ I+ Q+ P +RVG
Sbjct: 271 LRLEAGLCLYGNDIDETTTPVEATLVWTIGKRRRQARDFPGADIIVPQIKAKTPRKRVGL 330
Query: 330 FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 389
+ GPP R H+ + G IGE+TSG SPCLK+N+AMGYV++ KAGT +++EVR K
Sbjct: 331 ISTGPPVRQHTPILSSDGRVIGEVTSGCPSPCLKQNVAMGYVETAFSKAGTSIQVEVRKK 390
Query: 390 AYDGNITKMPFVPTKYY 406
A ++KMPFVPTKYY
Sbjct: 391 AVPAVVSKMPFVPTKYY 407
>UNIPROTKB|I3LIR4 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 OMA:KALYGGM
TIGRFAMs:TIGR00528 GeneTree:ENSGT00510000047333
RefSeq:NP_001231355.1 UniGene:Ssc.12062 Ensembl:ENSSSCT00000031431
GeneID:396679 KEGG:ssc:396679 Uniprot:I3LIR4
Length = 403
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 197/371 (53%), Positives = 253/371 (68%)
Query: 37 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGK 96
L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ RQ+ SLFDVSHM + G
Sbjct: 33 LRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRQHCSLFDVSHMLQTKIFGS 92
Query: 97 DCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGCR+KD
Sbjct: 93 DRVKMMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCREKD 152
Query: 157 LAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILD 216
L ++ ++ GGD+ + D +LLALQGP AA VLQ DDL KL F +++
Sbjct: 153 LTLMQDRVRELQNTGGDIGLEVMDN-ALLALQGPTAAQVLQAGVTDDLRKLPFMTSAVME 211
Query: 217 INGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAG 275
+ GVS C +TR GYTGEDG EISVP+ AV LA A+LE E V+L GL ARDSLRLEAG
Sbjct: 212 VFGVSGCRVTRCGYTGEDGVEISVPAAEAVRLATALLENPE--VKLAGLAARDSLRLEAG 269
Query: 276 LCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP 335
LCLYGND+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P
Sbjct: 270 LCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIVPQLKSKVQRRRVGLTCEGAP 329
Query: 336 ARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNI 395
R+HS + +G IG +TSG SPCLKKN+AMGYV + GT + +EVR K +
Sbjct: 330 VRAHSPILSTEGTVIGTVTSGCPSPCLKKNVAMGYVPYEHSRPGTLLLVEVRRKQQVAVV 389
Query: 396 TKMPFVPTKYY 406
+KMPFVPT YY
Sbjct: 390 SKMPFVPTSYY 400
>RGD|1359408 [details] [associations]
symbol:Amt "aminomethyltransferase" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 RGD:1359408 GO:GO:0005737 GO:GO:0008483
EMBL:CH473954 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
CTD:275 HOVERGEN:HBG005822 EMBL:BC083803 IPI:IPI00358872
RefSeq:NP_001014026.1 UniGene:Rn.162376 SMR:Q5XI85 GeneID:306586
KEGG:rno:306586 NextBio:656268 Genevestigator:Q5XI85 Uniprot:Q5XI85
Length = 403
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 199/383 (51%), Positives = 263/383 (68%)
Query: 25 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFD 84
+ R F+S + L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ R++ SLFD
Sbjct: 21 VQSRPFSSVQDGLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRRHCSLFD 80
Query: 85 VSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHI 144
VSHM + G D V +E +V+ D+A L P GTL++FTNE GG +DD ++T + H+
Sbjct: 81 VSHMLQTKIFGCDRVRLMENIVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHL 140
Query: 145 YLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDL 204
Y+V NAGCRDKDLA ++ +K F +G DV + D +LLALQGP AA VLQ DD+
Sbjct: 141 YVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEVVDN-ALLALQGPTAAQVLQAGVTDDM 199
Query: 205 SKLYFGEFRILDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTG 263
KL F ++++ GVS C +TR GYTGEDG EISVP+ AV LA A+L+ E V+L G
Sbjct: 200 RKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPAAGAVHLATALLKNPE--VKLAG 257
Query: 264 LGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP 323
L ARDSLRLEAGLCLYGND+++H TPVE L+W +GKRRR F GA+ I+ QL
Sbjct: 258 LAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRVAMDFPGAKIIIPQLKGEVQ 317
Query: 324 VRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVK 383
RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT++
Sbjct: 318 RRRVGLICEGAPMRAHSPILNTEGAVIGTVTSGCPSPSLKKNVAMGYVAFKYSRPGTQLL 377
Query: 384 IEVRGKAYDGNITKMPFVPTKYY 406
+EVR K ++KMPFVPTKYY
Sbjct: 378 VEVRRKQQMTVVSKMPFVPTKYY 400
>UNIPROTKB|P25285 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion"
evidence=IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0031405 "lipoic acid binding" evidence=IDA]
[GO:0006546 "glycine catabolic process" evidence=TAS] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483
GO:GO:0005743 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 GO:GO:0031405
eggNOG:COG0404 HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
EMBL:M59799 IPI:IPI00700367 PIR:A23707 RefSeq:NP_803451.1
UniGene:Bt.7177 ProteinModelPortal:P25285 SMR:P25285 STRING:P25285
PRIDE:P25285 Ensembl:ENSBTAT00000002992 GeneID:280719
KEGG:bta:280719 CTD:275 GeneTree:ENSGT00510000047333
HOVERGEN:HBG005822 InParanoid:P25285 OrthoDB:EOG45MN5K
NextBio:20804898 Uniprot:P25285
Length = 397
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 195/371 (52%), Positives = 250/371 (67%)
Query: 37 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGK 96
L +T L+DFH+A+GGKMV FAGWS+P+QY+DS + S L+ RQ+ SLFDVSHM + G
Sbjct: 27 LHRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVNSHLHTRQHCSLFDVSHMLQTKIFGC 86
Query: 97 DCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGCR+KD
Sbjct: 87 DRVKLMESLVVGDIAELKPNQGTLSLFTNEAGGILDDLIVTSASEGHLYVVSNAGCREKD 146
Query: 157 LAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILD 216
L ++ ++ KG DV+ + D +LLALQGP AA VLQ DDL KL F +++
Sbjct: 147 LTLMQDKVRELQNKGSDVALEVMDN-ALLALQGPTAAQVLQAGVADDLRKLPFMTSAVME 205
Query: 217 INGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAG 275
+ GVS C +TR GYTGEDG EISVP+ AV LA A+L+ E V+L GL ARDSLRLEAG
Sbjct: 206 VFGVSGCRVTRCGYTGEDGVEISVPAAEAVHLAAALLKNPE--VKLAGLAARDSLRLEAG 263
Query: 276 LCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP 335
LCLYGND+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P
Sbjct: 264 LCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAP 323
Query: 336 ARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNI 395
R+ S + +G IG +TSG SPCLKKN+AMGYV + GT + +EVR K +
Sbjct: 324 VRAQSPILSPEGTVIGAVTSGCPSPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVV 383
Query: 396 TKMPFVPTKYY 406
+KMPFV T YY
Sbjct: 384 SKMPFVSTNYY 394
>UNIPROTKB|P48728 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9606 "Homo sapiens" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
GO:GO:0008483 DrugBank:DB00157 EMBL:CH471055 DrugBank:DB00116
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 MIM:605899
Orphanet:407 eggNOG:COG0404 HOGENOM:HOG000239380 OMA:KALYGGM
TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822 EMBL:D13811
EMBL:D14686 EMBL:AK290600 EMBL:AK293481 EMBL:AK296177 EMBL:BC007546
IPI:IPI00299300 IPI:IPI00793058 IPI:IPI00910686 IPI:IPI00925396
PIR:I54192 RefSeq:NP_000472.2 RefSeq:NP_001158182.1
RefSeq:NP_001158183.1 UniGene:Hs.102 PDB:1WSR PDB:1WSV PDBsum:1WSR
PDBsum:1WSV ProteinModelPortal:P48728 SMR:P48728 STRING:P48728
PhosphoSite:P48728 DMDM:1346122 PaxDb:P48728 PRIDE:P48728
Ensembl:ENST00000273588 Ensembl:ENST00000395338
Ensembl:ENST00000458307 Ensembl:ENST00000538581 GeneID:275
KEGG:hsa:275 UCSC:uc003cww.3 GeneCards:GC03M049429 HGNC:HGNC:473
HPA:HPA005566 MIM:238310 neXtProt:NX_P48728 PharmGKB:PA24780
InParanoid:P48728 PhylomeDB:P48728 SABIO-RK:P48728 ChiTaRS:AMT
EvolutionaryTrace:P48728 GenomeRNAi:275 NextBio:1109
ArrayExpress:P48728 Bgee:P48728 CleanEx:HS_AMT
Genevestigator:P48728 GermOnline:ENSG00000145020 Uniprot:P48728
Length = 403
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 197/373 (52%), Positives = 253/373 (67%)
Query: 35 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLK 94
E L++T L+DFH+A+GGKMV FAGWS+P+QY+DS +S L+ RQ+ SLFDVSHM +
Sbjct: 31 EVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHTDSHLHTRQHCSLFDVSHMLQTKIL 90
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
G D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGC +
Sbjct: 91 GSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWE 150
Query: 155 KDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI 214
KDLA ++ ++ +G DV + D +LLALQGP AA VLQ DDL KL F +
Sbjct: 151 KDLALMQDKVRELQNQGRDVGLEVLDN-ALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 209
Query: 215 LDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLE 273
+++ GVS C +TR GYTGEDG EISVP AV LA AIL+ E V+L GL ARDSLRLE
Sbjct: 210 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPE--VKLAGLAARDSLRLE 267
Query: 274 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGG 333
AGLCLYGND+++H TPVE L+W +GKRRRA F GA+ I+ QL RRVG G
Sbjct: 268 AGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEG 327
Query: 334 PPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDG 393
P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT + +EVR K
Sbjct: 328 APMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMA 387
Query: 394 NITKMPFVPTKYY 406
++KMPFVPT YY
Sbjct: 388 VVSKMPFVPTNYY 400
>MGI|MGI:3646700 [details] [associations]
symbol:Amt "aminomethyltransferase" species:10090 "Mus
musculus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 MGI:MGI:3646700 GO:GO:0005739
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528 CTD:275
GeneTree:ENSGT00510000047333 HOVERGEN:HBG005822 OrthoDB:EOG45MN5K
EMBL:AJ437692 IPI:IPI00229274 RefSeq:NP_001013836.1
UniGene:Mm.390225 ProteinModelPortal:Q8CFA2 SMR:Q8CFA2
STRING:Q8CFA2 PhosphoSite:Q8CFA2 PaxDb:Q8CFA2 PRIDE:Q8CFA2
Ensembl:ENSMUST00000035230 GeneID:434437 KEGG:mmu:434437
InParanoid:Q8CFA2 NextBio:409655 Bgee:Q8CFA2 CleanEx:MM_AMT
Genevestigator:Q8CFA2 GermOnline:ENSMUSG00000032607 Uniprot:Q8CFA2
Length = 403
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 195/383 (50%), Positives = 259/383 (67%)
Query: 25 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFD 84
+ R +S + L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ R++ SLFD
Sbjct: 21 VQSRPLSSVQDVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRRHCSLFD 80
Query: 85 VSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHI 144
VSHM + G D V LE +V+ D+A L P GTL++FTNE GG +DD +++ + H+
Sbjct: 81 VSHMLQTKIFGCDRVKLLESVVVGDIAELRPNQGTLSLFTNEAGGILDDLIVSNTSEGHL 140
Query: 145 YLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDL 204
Y+V NAGCRDKDLA ++ +K F +G DV + E +LLALQGP A VLQ DD+
Sbjct: 141 YVVSNAGCRDKDLALMQDKVKEFQNRGLDVGLEVV-ENALLALQGPTATQVLQAGVTDDM 199
Query: 205 SKLYFGEFRILDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTG 263
KL F ++++ GVS C +TR GYTGEDG EISVP+ AV LA +L+ E V+L G
Sbjct: 200 KKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPATGAVHLATTLLKNPE--VKLAG 257
Query: 264 LGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP 323
L ARDSLRLEAGLCLYGND+++H TPVE L+W +GKRRR F GA+ I+ QL
Sbjct: 258 LAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKGEVQ 317
Query: 324 VRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVK 383
RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT++
Sbjct: 318 RRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGTQLL 377
Query: 384 IEVRGKAYDGNITKMPFVPTKYY 406
+EVR K ++KMPFVPT YY
Sbjct: 378 VEVRRKQQMTVVSKMPFVPTNYY 400
>UNIPROTKB|Q9TSZ7 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9615 "Canis lupus familiaris" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0008483 "transaminase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AJ012166
KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
OMA:KALYGGM TIGRFAMs:TIGR00528 CTD:275 GeneTree:ENSGT00510000047333
HOVERGEN:HBG005822 RefSeq:NP_001029165.1 UniGene:Cfa.11059
ProteinModelPortal:Q9TSZ7 SMR:Q9TSZ7 STRING:Q9TSZ7 PRIDE:Q9TSZ7
Ensembl:ENSCAFT00000035669 GeneID:484770 KEGG:cfa:484770
InParanoid:Q9TSZ7 SABIO-RK:Q9TSZ7 NextBio:20858847 Uniprot:Q9TSZ7
Length = 403
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 195/371 (52%), Positives = 252/371 (67%)
Query: 37 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGK 96
L++T L+DFH+A+GGKMV FAGWS+P+QY+DS ++S L+ R++ SLFDVSHM + G
Sbjct: 33 LRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHVDSHLHTRRHCSLFDVSHMLQTKILGC 92
Query: 97 DCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
D V +E LV+ D+A L P GTL++FTNE GG DD ++T + ++Y+V NAGC DKD
Sbjct: 93 DRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGIEDDLIVTSTSEGYLYVVSNAGCWDKD 152
Query: 157 LAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILD 216
LA ++ ++ G DVS + D +LLALQGP A VLQ DDL KL F +++
Sbjct: 153 LALMQGKVRELQNMGSDVSLEVVDN-ALLALQGPTATQVLQAGVADDLRKLPFMTSAVME 211
Query: 217 INGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAG 275
+ GVS C +TR GYTGEDG EISVP+ AV LA A+LE E V+L GL ARDSLRLEAG
Sbjct: 212 VFGVSGCRVTRCGYTGEDGVEISVPAAAAVRLAAALLENPE--VKLAGLAARDSLRLEAG 269
Query: 276 LCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP 335
LCLYG+D+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P
Sbjct: 270 LCLYGSDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAP 329
Query: 336 ARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNI 395
R+HS + + +G IG +TSG SPCLKKN+AMGYV S + GT + +EVR K +
Sbjct: 330 VRAHSPILNMEGTVIGTVTSGCPSPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVV 389
Query: 396 TKMPFVPTKYY 406
+KMPFV T YY
Sbjct: 390 SKMPFVTTNYY 400
>UNIPROTKB|P28337 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9031 "Gallus gallus" [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 CTD:275 HOVERGEN:HBG005822
EMBL:D11162 IPI:IPI00578487 PIR:A44167 RefSeq:NP_990119.1
UniGene:Gga.1002 ProteinModelPortal:P28337 SMR:P28337 PRIDE:P28337
GeneID:395566 KEGG:gga:395566 BioCyc:MetaCyc:MONOMER-12927
NextBio:20815640 Uniprot:P28337
Length = 392
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 197/386 (51%), Positives = 252/386 (65%)
Query: 22 KKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGS 81
+ +ARRH +S E LK+T L H A GG+MVPFAGWS+P+QY +ES L+ R++ S
Sbjct: 7 RAALARRHLSSAPEGLKQTPLDALHRARGGRMVPFAGWSLPVQYGRGHLESHLHTRRHCS 66
Query: 82 LFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKD 141
LFDVSHM + G+D V FLE LV+ D+A L PG GTLT+ TNE G +DD ++T +
Sbjct: 67 LFDVSHMLQTRVYGRDRVRFLESLVVGDIAELRPGQGTLTLLTNERGDIVDDLIVTNTAE 126
Query: 142 DHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTK 201
DH+Y+V NAGC DKD A +E A GGDV + +R+ +QGP A VLQ
Sbjct: 127 DHLYVVSNAGCADKDRAVMEGRAAELRAAGGDVHLEVSGQRAA-GVQGPSMAQVLQAGLP 185
Query: 202 DDLSKLYFGEFRILDINGV-SCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVR 260
DDL+KL F + GV C +TR GYTGEDG EISVP+ RAV+LA+ +L E V
Sbjct: 186 DDLTKLTFMTSTATTVFGVPGCRVTRCGYTGEDGVEISVPAGRAVELAERLLGCPE--VW 243
Query: 261 LTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDE 320
GL ARDSLRLEAGLCLYGND+++ TPVEAGL W +GKRRR F GA I++Q+ E
Sbjct: 244 PAGLAARDSLRLEAGLCLYGNDIDESTTPVEAGLLWTLGKRRRTAMDFPGAAIIMEQVKE 303
Query: 321 GPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGT 380
P +RVG + GPP R + + +G P+G +TSG SP L KNIAMGYV++ + GT
Sbjct: 304 KPKRKRVGLTSVGPPLRPPAAILGPEGTPVGTVTSGCPSPSLGKNIAMGYVQAAHSRPGT 363
Query: 381 KVKIEVRGKAYDGNITKMPFVPTKYY 406
+ +EVR K + +TKMPFVPT YY
Sbjct: 364 TLTVEVRKKQHPALVTKMPFVPTHYY 389
>DICTYBASE|DDB_G0292326 [details] [associations]
symbol:gcvT "aminomethyltransferase" species:44689
"Dictyostelium discoideum" [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
dictyBase:DDB_G0292326 GO:GO:0005739 GO:GO:0008483
GenomeReviews:CM000155_GR EMBL:AAFI02000189 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
RefSeq:XP_629708.1 HSSP:P48728 ProteinModelPortal:Q54DD3
STRING:Q54DD3 PRIDE:Q54DD3 EnsemblProtists:DDB0231218
GeneID:8628622 KEGG:ddi:DDB_G0292326 ProtClustDB:CLSZ2429438
Uniprot:Q54DD3
Length = 403
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 197/404 (48%), Positives = 261/404 (64%)
Query: 13 ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMES 72
I++ + + +K+ +R+F+S E LKKTAL++ H G KMVPF GW MP+QY +M+
Sbjct: 2 ISQNIIKIIQKS-NKRYFSSSNE-LKKTALNELHKELGAKMVPFCGWEMPVQYPAGVMKE 59
Query: 73 TLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSID 132
L+ R+ LFDVSHM L + GKD V F E +V+AD+ L G L+VFTNE GG ID
Sbjct: 60 HLHVRKESGLFDVSHMGQLRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIID 119
Query: 133 DSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG--DVSWHIHDERSLLALQGP 190
D++IT D +Y+VVNAGC DKD++HI +K F + DVS + ++ SL+A+QGP
Sbjct: 120 DTMITNAGDS-LYVVVNAGCADKDISHINEKIKEFKSVNPTHDVSMQLLEDLSLIAIQGP 178
Query: 191 LAAPVLQHLTKD-DLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAK 249
+LQ KD D++ + F R + I G+ C +TR GYTGEDGFEISVPS++AV LA+
Sbjct: 179 TTESILQKFVKDQDITNMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAE 238
Query: 250 AILEKS----EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAE 305
L S E ++ GLGARDSLRLEAGLCLYG+D+ +TP+EA L W I KRRR E
Sbjct: 239 LFLATSNASIESGIKPAGLGARDSLRLEAGLCLYGHDLNDDITPIEASLNWLISKRRREE 298
Query: 306 GGFLGAEKILKQLD-EGPPVRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLK 363
GGF GA I KQL +G P +RVG G PAR + D N IG++TSG SP +
Sbjct: 299 GGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGTISPITR 358
Query: 364 KNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 407
++I+M YVK+ K GT+V + +RGK I+KMPFVPT Y K
Sbjct: 359 QSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNYKK 402
>UNIPROTKB|H0Y695 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0008483 "transaminase
activity" evidence=IEA] [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528 HGNC:HGNC:473
ChiTaRS:AMT ProteinModelPortal:H0Y695 Ensembl:ENST00000427987
Uniprot:H0Y695
Length = 384
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 185/353 (52%), Positives = 240/353 (67%)
Query: 35 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLK 94
E L++T L+DFH+A+GGKMV FAGWS+P+QY+DS +S L+ RQ+ SLFDVSHM +
Sbjct: 29 EVLRRTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHTDSHLHTRQHCSLFDVSHMLQTKIL 88
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
G D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGC +
Sbjct: 89 GSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWE 148
Query: 155 KDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI 214
KDLA ++ ++ +G DV + D +LLALQGP AA VLQ DDL KL F +
Sbjct: 149 KDLALMQDKVRELQNQGRDVGLEVLDN-ALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 207
Query: 215 LDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLE 273
+++ GVS C +TR GYTGEDG EISVP AV LA AIL+ E V+L GL ARDSLRLE
Sbjct: 208 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPE--VKLAGLAARDSLRLE 265
Query: 274 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGG 333
AGLCLYGND+++H TPVE L+W +GKRRRA F GA+ I+ QL RRVG G
Sbjct: 266 AGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEG 325
Query: 334 PPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEV 386
P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT + +E+
Sbjct: 326 APMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEL 378
>POMBASE|SPAC31G5.14 [details] [associations]
symbol:gcv1 "glycine decarboxylase T subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS;IDA] [GO:0005960 "glycine cleavage
complex" evidence=ISS] [GO:0008483 "transaminase activity"
evidence=ISS] [GO:0019464 "glycine decarboxylation via glycine
cleavage system" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487
PomBase:SPAC31G5.14 GO:GO:0005739 GO:GO:0008483 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0004047 InterPro:IPR013977
Pfam:PF08669 GO:GO:0019464 GO:GO:0005960 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
OMA:KALYGGM TIGRFAMs:TIGR00528 EMBL:D84656 PIR:T38631
RefSeq:NP_594015.1 ProteinModelPortal:O14110 STRING:O14110
PRIDE:O14110 EnsemblFungi:SPAC31G5.14.1 GeneID:2543195
KEGG:spo:SPAC31G5.14 OrthoDB:EOG4WT0K6 NextBio:20804218
Uniprot:O14110
Length = 387
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 179/392 (45%), Positives = 259/392 (66%)
Query: 19 RADKKTIARRHFASDAEN-LKKTALHDFHVANGGKMVPFAGWSMPIQYK-DSIMESTLNC 76
R+ +I +R ++ A + LK+T L+D H+ G +VPFAG+SMP+QYK +I S
Sbjct: 3 RSAALSILKRQSSTAASSSLKRTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWT 62
Query: 77 RQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
R++ LFDVSHM ++G++ +LE + + + L P TL+ FTNE GG IDD++I
Sbjct: 63 REHSGLFDVSHMVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTII 122
Query: 137 TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVL 196
+K ++ Y+V NA C +KD A+++ H++++ KG ++ + R+L+A+QGP A V+
Sbjct: 123 SKQDENTYYIVTNAACSEKDEANLKKHIENW--KGVELE-RVQG-RALIAIQGPETASVV 178
Query: 197 QHLTKD-DLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKS 255
Q L + D S L FG+ +D GV C +R+GYTGEDGFE+S+P E +VD A +L +
Sbjct: 179 QKLIPNVDFSVLKFGQSAYVDFKGVKCLFSRSGYTGEDGFEVSIPEEVSVDFASTLL--A 236
Query: 256 EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKIL 315
+ +VR GLGARD+LRLEAG+CLYG+D++ +PVE L+W IGKRRR EGGF+G+ +IL
Sbjct: 237 DTRVRPIGLGARDTLRLEAGMCLYGSDIDDTTSPVEGSLSWIIGKRRRKEGGFVGSSRIL 296
Query: 316 KQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGL 375
K+L +GP RRVGF PAR H + G +G++TSG SP L KNIAMGY+ +GL
Sbjct: 297 KELKDGPSRRRVGFIVEKVPAR-HGSAVEVDGVEVGQVTSGCPSPTLGKNIAMGYISTGL 355
Query: 376 HKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 407
H+ GT I+VR K + + +MPFV T YYK
Sbjct: 356 HQVGTPAHIKVRNKLHPAQVVRMPFVETHYYK 387
>WB|WBGene00017765 [details] [associations]
symbol:gcst-1 species:6239 "Caenorhabditis elegans"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 OMA:KALYGGM TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 EMBL:FO080538 PIR:T25732
RefSeq:NP_504502.1 ProteinModelPortal:Q22968 SMR:Q22968
STRING:Q22968 PaxDb:Q22968 EnsemblMetazoa:F25B4.1.1
EnsemblMetazoa:F25B4.1.2 GeneID:178960 KEGG:cel:CELE_F25B4.1
UCSC:F25B4.1.1 CTD:178960 WormBase:F25B4.1 InParanoid:Q22968
NextBio:903294 Uniprot:Q22968
Length = 402
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 190/387 (49%), Positives = 243/387 (62%)
Query: 26 ARRHFASDAE-NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLF 83
A R F+ AE + K+T L + H +GGK+V FAG+ MP QY D SI EST++ R++ SLF
Sbjct: 13 ASRCFSRTAEASAKQTCLIETHKKHGGKLVEFAGYDMPTQYADFSIKESTIHTRKHVSLF 72
Query: 84 DVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH 143
DVSHM + GKD V F+E L ADV GL +GTL+VFTNE GG DD +I K D
Sbjct: 73 DVSHMLQTYITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDF 132
Query: 144 IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDD 203
++LV NAGC +KDL +++ + ++ +KG DV D R L+A+QGP A VLQ T D
Sbjct: 133 LFLVTNAGCIEKDLPYLQENAAAWRSKGKDVKIETLDNRGLVAVQGPEMAKVLQEGTDID 192
Query: 204 LSKLYFGEFRILDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLT 262
LSKL F + + + G+ C +TR GYTGEDG EISV +A L + +L G V+L
Sbjct: 193 LSKLTFMKTTVGKVFGIDGCRVTRCGYTGEDGVEISVDPTKAEQLVERLLASQAGSVKLA 252
Query: 263 GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGP 322
GLGARD+LRLEAGLCLYG+D+E++ TP+EAGL + + KRRR F GAE I+KQL E
Sbjct: 253 GLGARDALRLEAGLCLYGSDIEENTTPIEAGLAFVVAKRRRETLDFPGAEHIVKQLKEKS 312
Query: 323 -PVRRVGFFA-GGPPARSHSKVHDEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAG 379
P RRVG A G RSH + D IG +TSG SP L KNIA+ YV K G
Sbjct: 313 WPKRRVGLLAPAGRCPRSHLPLIDPLDKCSIGFVTSGCPSPTLGKNIAIAYVDKSHSKIG 372
Query: 380 TKVKIEVRGKAYDGNITKMPFVPTKYY 406
TK ++ K + KMPFVPT Y+
Sbjct: 373 TKFVVDFGAKQAPVEVVKMPFVPTNYF 399
>FB|FBgn0032287 [details] [associations]
symbol:CG6415 species:7227 "Drosophila melanogaster"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0005960 "glycine cleavage complex" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0008483 GO:GO:0005811
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
EMBL:BT021235 ProteinModelPortal:Q5BII9 STRING:Q5BII9 PaxDb:Q5BII9
PRIDE:Q5BII9 UCSC:CG6415-RA FlyBase:FBgn0032287 InParanoid:Q5BII9
OrthoDB:EOG4H44K8 ArrayExpress:Q5BII9 Bgee:Q5BII9 Uniprot:Q5BII9
Length = 409
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 184/388 (47%), Positives = 247/388 (63%)
Query: 28 RHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLFDVS 86
RH +S A ++TAL+DFHV GGK+V F G+++P+QY D SI+ S L+ RQ GS+FDVS
Sbjct: 20 RHASSAAGEGQRTALYDFHVQKGGKIVNFGGYALPVQYSDQSIIASHLHTRQVGSIFDVS 79
Query: 87 HMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYL 146
HM + GKD LE + AD+ G G+G+LTVFTNE GG +DD ++ KV + +Y+
Sbjct: 80 HMLQSRIFGKDAAACLESVCTADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYV 139
Query: 147 VVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD--ERSLLALQGPLAAPVLQHLT--KD 202
V NA +++D+ ++ + +F ++G DVS ++SL+A+QGP A L L K
Sbjct: 140 VSNAAMKEQDMGIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKA 199
Query: 203 DLSKLYFGEFRILDINGV-SCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRL 261
L +LYF + + G+ + +TR GYTGEDG EISV S +A L +++LE G ++L
Sbjct: 200 SLDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLLES--GVLKL 257
Query: 262 TGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEG 321
GLGARDSLRLEAGLCLYG+D++ TPVEA L W + KRRR F GA+ IL QL EG
Sbjct: 258 AGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRTTRDFPGADVILGQLKEG 317
Query: 322 PPVRRVGFFAGG---PPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKA 378
RRVG G PPARS + QG +G++TSG SP +NIAMGYV L
Sbjct: 318 VSRRRVGLQMLGTKPPPARSGVAIFS-QGQQVGQVTSGCPSPSAGRNIAMGYVAENLKAP 376
Query: 379 GTKVKIEVRGKAYDGNITKMPFVPTKYY 406
GTKV+ +VR K Y+ +TKMPFV YY
Sbjct: 377 GTKVEFKVRDKLYEAEVTKMPFVKANYY 404
>CGD|CAL0006098 [details] [associations]
symbol:GCV1 species:5476 "Candida albicans" [GO:0004375
"glycine dehydrogenase (decarboxylating) activity"
evidence=IEA;NAS] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA]
[GO:0006544 "glycine metabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:AACQ01000034
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0004375 PANTHER:PTHR13847:SF5 eggNOG:COG0404
TIGRFAMs:TIGR00528 RefSeq:XP_719084.1 STRING:Q5AC31 GeneID:3639172
KEGG:cal:CaO19.5519 Uniprot:Q5AC31
Length = 394
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 176/397 (44%), Positives = 239/397 (60%)
Query: 25 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYK-DSIMESTLNCRQNGSLF 83
I + S NL KT LH+ H+ GGKMVP+AG+ MP+ YK S +ES R LF
Sbjct: 4 ITSKRLYSSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLF 63
Query: 84 DVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH 143
DVSHM ++ GKD L+K+ D++ L T +L+V N NGG IDD +ITK +D
Sbjct: 64 DVSHMLQHNISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDE 123
Query: 144 IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDD 203
Y+V NAGCR+KD+ I+ F + H E +LLA+QGP A +LQ T +D
Sbjct: 124 YYMVTNAGCREKDVKFIKDEASQFNSVN-----HNTFEGTLLAIQGPKAQEILQQFTNED 178
Query: 204 LSKLYFGEFRILDIN--GVSCFLTRTGYTGEDGFEISVPS------ERAVDLAKAILEKS 255
LSK+YFG+ + L ++ G + +L R+GYTGEDGFE+S+PS ++A+D ++ +
Sbjct: 179 LSKIYFGQTKFLKLSPIGATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEY 238
Query: 256 EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG-FLGAEKI 314
V+ GL ARDSLRLEAG+CLYG+++ + +TP+EA LTW I K RR E F GA KI
Sbjct: 239 PDVVKPIGLAARDSLRLEAGMCLYGHELTEEITPIEASLTWLIPKTRRDENNDFNGASKI 298
Query: 315 LKQLDEGPPV--RRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYV 371
L Q+ + RR+G + GP R +K+ +E G IG +TSG SP L NIA Y+
Sbjct: 299 LSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVVIGYVTSGSPSPTLGGNIAQAYI 358
Query: 372 KSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
H G+ VKIE+R K D ITK+PFVP+ Y P
Sbjct: 359 AKX-HXXGSNVKIEIRNKLRDAVITKLPFVPSILYNP 394
>UNIPROTKB|Q5AC31 [details] [associations]
symbol:GCV1 "Aminomethyltransferase" species:237561
"Candida albicans SC5314" [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=NAS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AACQ01000034 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0004375 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 RefSeq:XP_719084.1 STRING:Q5AC31
GeneID:3639172 KEGG:cal:CaO19.5519 Uniprot:Q5AC31
Length = 394
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 176/397 (44%), Positives = 239/397 (60%)
Query: 25 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYK-DSIMESTLNCRQNGSLF 83
I + S NL KT LH+ H+ GGKMVP+AG+ MP+ YK S +ES R LF
Sbjct: 4 ITSKRLYSSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLYKGQSHIESHNWVRSKVGLF 63
Query: 84 DVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH 143
DVSHM ++ GKD L+K+ D++ L T +L+V N NGG IDD +ITK +D
Sbjct: 64 DVSHMLQHNISGKDAQSLLQKITPIDLSKLPVNTSSLSVLLNNNGGVIDDCIITKHGEDE 123
Query: 144 IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDD 203
Y+V NAGCR+KD+ I+ F + H E +LLA+QGP A +LQ T +D
Sbjct: 124 YYMVTNAGCREKDVKFIKDEASQFNSVN-----HNTFEGTLLAIQGPKAQEILQQFTNED 178
Query: 204 LSKLYFGEFRILDIN--GVSCFLTRTGYTGEDGFEISVPS------ERAVDLAKAILEKS 255
LSK+YFG+ + L ++ G + +L R+GYTGEDGFE+S+PS ++A+D ++ +
Sbjct: 179 LSKIYFGQTKFLKLSPIGATVYLARSGYTGEDGFELSIPSTTPEESKQALDFFYTLINEY 238
Query: 256 EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG-FLGAEKI 314
V+ GL ARDSLRLEAG+CLYG+++ + +TP+EA LTW I K RR E F GA KI
Sbjct: 239 PDVVKPIGLAARDSLRLEAGMCLYGHELTEEITPIEASLTWLIPKTRRDENNDFNGASKI 298
Query: 315 LKQLDEGPPV--RRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYV 371
L Q+ + RR+G + GP R +K+ +E G IG +TSG SP L NIA Y+
Sbjct: 299 LSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGTVVIGYVTSGSPSPTLGGNIAQAYI 358
Query: 372 KSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
H G+ VKIE+R K D ITK+PFVP+ Y P
Sbjct: 359 AKX-HXXGSNVKIEIRNKLRDAVITKLPFVPSILYNP 394
>TIGR_CMR|CPS_3841 [details] [associations]
symbol:CPS_3841 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
RefSeq:YP_270503.1 ProteinModelPortal:Q47XG7 STRING:Q47XG7
GeneID:3518894 KEGG:cps:CPS_3841 PATRIC:21470589 OMA:QRYAMFT
ProtClustDB:CLSK910129 BioCyc:CPSY167879:GI48-3858-MONOMER
Uniprot:Q47XG7
Length = 375
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 166/379 (43%), Positives = 228/379 (60%)
Query: 35 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLK 94
+ L KT +D H+ GGKMVPFAG+ MP+QY+ + + L+ R LFDVSHM L L
Sbjct: 6 QELLKTPCYDLHIEAGGKMVPFAGYDMPVQYEMGVKKEHLHTRAQAGLFDVSHMGQLKLV 65
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
GK+ LE LV D+ L G +FTN+ GG +DD +++ DH+++VVNA C+
Sbjct: 66 GKNAAAALETLVPVDIIDLPQGKQRYALFTNDQGGLLDDLMVSNF-GDHLFVVVNAACKA 124
Query: 155 KDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI 214
+D+AH++ H+ + DV I + R+LLALQGP A VL+ L + + + F + R+
Sbjct: 125 QDIAHMQKHLPA------DVEIEILEGRALLALQGPKAGEVLKRLLPES-ADMVFMDSRV 177
Query: 215 LDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEA 274
+D G C + R GYTGEDGFEIS+P E A + + +L + E + GLGARDSLRLE+
Sbjct: 178 VDFAGAQCIIGRAGYTGEDGFEISIPGEHAERITRLMLAEEE--IEWIGLGARDSLRLES 235
Query: 275 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG----GFLGAEKILKQLDEGPPVR-RVGF 329
GLCLYG+D++Q TPVEA L WAI K RR +G GF GA+ IL Q+ R R+G
Sbjct: 236 GLCLYGHDIDQTTTPVEASLLWAISKIRRTDGARAGGFPGADIILDQIATKDVARKRIGM 295
Query: 330 FA-GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRG 388
G P R K+ + QG+ IG +TSG P IAMGYV++ T++ EVRG
Sbjct: 296 VGLGKAPVREGIKLFNAQGDEIGVVTSGTAGPTKGSPIAMGYVQTQYAVLDTEIFAEVRG 355
Query: 389 KAYDGNITKMPFVPTKYYK 407
K I KMPFV +Y++
Sbjct: 356 KKLPMLIQKMPFVEQRYFR 374
>SGD|S000002426 [details] [associations]
symbol:GCV1 "T subunit of the mitochondrial glycine
decarboxylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0006544 "glycine
metabolic process" evidence=IMP] [GO:0004375 "glycine dehydrogenase
(decarboxylating) activity" evidence=ISS;IMP] [GO:0006730
"one-carbon metabolic process" evidence=IGI;IMP] [GO:0006546
"glycine catabolic process" evidence=IEA;IC] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008483 "transaminase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005960 "glycine cleavage complex" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 SGD:S000002426 GO:GO:0005739 GO:GO:0008483
EMBL:BK006938 GO:GO:0006730 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:X95966 EMBL:Z49770
GO:GO:0005960 KO:K00605 PANTHER:PTHR13847:SF5 eggNOG:COG0404
HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
GeneTree:ENSGT00510000047333 OMA:KPAFWGR OrthoDB:EOG4WT0K6
EMBL:L41522 EMBL:Z74315 PIR:S54642 RefSeq:NP_010302.1
ProteinModelPortal:P48015 SMR:P48015 IntAct:P48015 STRING:P48015
PaxDb:P48015 PeptideAtlas:P48015 EnsemblFungi:YDR019C GeneID:851582
KEGG:sce:YDR019C CYGD:YDR019c NextBio:969049 Genevestigator:P48015
GermOnline:YDR019C Uniprot:P48015
Length = 400
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 181/405 (44%), Positives = 240/405 (59%)
Query: 22 KKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSI-MESTLNCRQNG 80
KK + +R F S LKKTALHD HV+ GG MVP+AG+SMP+ YK +ES R N
Sbjct: 5 KKIVFKR-FNS---TLKKTALHDLHVSLGGTMVPYAGYSMPVLYKGQTHIESHNWTRTNA 60
Query: 81 SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVK 140
LFDVSHM L G V FL+++ D L G+GTL+V N GG +DD++ITK
Sbjct: 61 GLFDVSHMLQSKLSGPHSVKFLQRVTPTDFNALPVGSGTLSVLLNPQGGVVDDTIITKEN 120
Query: 141 DDH-IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHL 199
DD+ Y+V NAGC ++D +++ + D W I + RSLLALQGP A VL+ L
Sbjct: 121 DDNEFYIVTNAGCAERDTEFFHDELQNGSTL--DCQWKIIEGRSLLALQGPKAKDVLEPL 178
Query: 200 TKD-----DLSKLYFG---EFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
DL +L+FG EF + D G + R GYTGEDGFEIS+ +E+AV+ A+ +
Sbjct: 179 LSKTAPGKDLKELFFGQRHEFALKD--GSLVQIARGGYTGEDGFEISIANEKAVEFAEQL 236
Query: 252 LEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRR----AEGG 307
L + ++ GL ARDSLRLEAG+CLYG+++++ +TPVEA L W I K RR +
Sbjct: 237 L--ANPVMKPIGLAARDSLRLEAGMCLYGHELDESITPVEAALNWVISKSRRDLVDQKYW 294
Query: 308 FLGAEKILKQLDEGPPVR-RVGF--FAGGPPARSHSKVH-DEQGNPIGEITSGGFSPCLK 363
F G KI+ QL+ + RVGF GP AR+ K+ + +G +TSG SP L
Sbjct: 295 FNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLN 354
Query: 364 K-NIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 407
NI YV+ G HK GTK+ ++VR K Y + KMP VPT YYK
Sbjct: 355 NINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYYK 399
>TIGR_CMR|SPO_A0057 [details] [associations]
symbol:SPO_A0057 "glycine cleavage system T protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:YP_164888.1 ProteinModelPortal:Q5LLH0
GeneID:3196668 KEGG:sil:SPOA0057 PATRIC:23381418 Uniprot:Q5LLH0
Length = 365
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 168/369 (45%), Positives = 221/369 (59%)
Query: 38 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKD 97
K+T L+D HV GGKMV FAGW MP+QY IM CR+ +LFDVSHM + L+G D
Sbjct: 6 KRTPLYDLHVELGGKMVDFAGWEMPVQYPMGIMGEHKQCREKAALFDVSHMGQVILRGDD 65
Query: 98 CVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDL 157
LEKL L G FTN GG +DD +++ ++ ++VVNA R +D+
Sbjct: 66 IGAKLEKLCPQVFLTLPEGKARYGFFTNAEGGIMDDLIVSNA-GEYFFVVVNAALRHQDI 124
Query: 158 AHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDI 217
H+ AH+ G +V+ I D R+L+A+QGP A V+ L L F E + +I
Sbjct: 125 PHLAAHLD-----GVEVT-EIFD-RALVAVQGPSAEDVVGRLCPA-ARDLKFMETMLGEI 176
Query: 218 NGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLC 277
+GV C ++R GYTGEDG+EIS+P A+ +++ L + + GLGARDSLRLEAGLC
Sbjct: 177 DGVDCRISRLGYTGEDGYEISIPEGEAIRISRLFLAHEDCEP--AGLGARDSLRLEAGLC 234
Query: 278 LYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGG-PPA 336
LYGND++ +P+EA L WAI KRRR EGGF GA +ILK++ EG P + VG G PA
Sbjct: 235 LYGNDIDNGTSPIEASLLWAIQKRRREEGGFPGAGRILKEIAEGAPRKLVGIKPEGRAPA 294
Query: 337 RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNIT 396
R H ++ G IGEITSGGF P + +AMGYV S G KV + +RGKA I
Sbjct: 295 RQHVEIQSLGGETIGEITSGGFGPTVGAPVAMGYVASAHAAPGEKVNLIIRGKAQPAEIV 354
Query: 397 KMPFVPTKY 405
+PFV Y
Sbjct: 355 ALPFVAQNY 363
>UNIPROTKB|B4DGG9 [details] [associations]
symbol:AMT "Aminomethyltransferase" species:9606 "Homo
sapiens" [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008483 "transaminase activity" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739 GO:GO:0008483
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
HOVERGEN:HBG005822 UniGene:Hs.102 HGNC:HGNC:473 ChiTaRS:AMT
EMBL:AK294592 IPI:IPI01015421 SMR:B4DGG9 STRING:B4DGG9
Ensembl:ENST00000546031 Uniprot:B4DGG9
Length = 306
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 159/306 (51%), Positives = 203/306 (66%)
Query: 102 LEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIE 161
+E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGC +KDLA ++
Sbjct: 1 MESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALMQ 60
Query: 162 AHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVS 221
++ +G DV + D +LLALQGP AA VLQ DDL KL F ++++ GVS
Sbjct: 61 DKVRELQNQGRDVGLEVLDN-ALLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVS 119
Query: 222 -CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYG 280
C +TR GYTGEDG EISVP AV LA AIL+ E V+L GL ARDSLRLEAGLCLYG
Sbjct: 120 GCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPE--VKLAGLAARDSLRLEAGLCLYG 177
Query: 281 NDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS 340
ND+++H TPVE L+W +GKRRRA F GA+ I+ QL RRVG G P R+HS
Sbjct: 178 NDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHS 237
Query: 341 KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 400
+ + +G IG +TSG SP LKKN+AMGYV + GT + +EVR K ++KMPF
Sbjct: 238 PILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPF 297
Query: 401 VPTKYY 406
VPT YY
Sbjct: 298 VPTNYY 303
>ASPGD|ASPL0000056788 [details] [associations]
symbol:AN1198 species:162425 "Emericella nidulans"
[GO:0004047 "aminomethyltransferase activity" evidence=RCA]
[GO:0006520 "cellular amino acid metabolic process" evidence=RCA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004375 "glycine
dehydrogenase (decarboxylating) activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:BN001308 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 PANTHER:PTHR13847:SF5 TIGRFAMs:TIGR00528
EnsemblFungi:CADANIAT00001427 OMA:GNDITPD Uniprot:C8VSU4
Length = 480
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 189/432 (43%), Positives = 244/432 (56%)
Query: 10 GQSITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-S 68
G+ I R L A+ A A+ +L+KT L+D H+A G KMVPFAG+SMP+QY D S
Sbjct: 51 GRLIARNLPVANGVRYASS--AASPGSLRKTQLYDLHIAKGAKMVPFAGYSMPLQYSDLS 108
Query: 69 IMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNEN- 127
+ES R+ SLFDVSHM L G + L K+ + + L + TL+
Sbjct: 109 HVESHKWTREKASLFDVSHMVQHRLSGPGALDLLMKVTPSSLDKLENNSSTLSCLLEPGT 168
Query: 128 GGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG---DVSWHIHDERSL 184
GG +DD+VIT++ D Y V NAG RD+DLA + A + +F A G +++W I + SL
Sbjct: 169 GGIVDDTVITRLSTDTFYFVTNAGRRDEDLAFLTAEIDAFKAAHGAEKEITWEILSDHSL 228
Query: 185 LALQGPLAAPVLQHLTKD-----DLSKLYFGEFRILDIN---GVSC----FLTRTGYTGE 232
+ALQGP AA LQ L + DLS LYFG R L +N G ++RTGYTGE
Sbjct: 229 IALQGPEAAATLQPLIHNNGADSDLSTLYFGNCRSLHLNLPDGTQTQEPLLISRTGYTGE 288
Query: 233 DGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEA 292
DGFEIS+P + +L ++ VRL GL ARDSLRLEAG+CLYG+D+ TP A
Sbjct: 289 DGFEISIPPSVSPSTITELLLQNPS-VRLAGLAARDSLRLEAGMCLYGHDISTAQTPPAA 347
Query: 293 GLTWAIGKRRRAEGG------FLGAEKILKQL---DEGPPVRRVGF-FAGGPPARSHSKV 342
L W +G+ RR F GA IL QL + RRVGF G PAR + +
Sbjct: 348 ALGWIVGRDRRDPSASSDRSQFNGAATILPQLASPSKNLSQRRVGFTIEKGSPAREGAVI 407
Query: 343 ---HDEQGNPIGEITSGGFSPCLK-KNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKM 398
+DE IG ITSG SP L NIAMGY+K GLHK GT+V + VR K + M
Sbjct: 408 IDLNDESKTQIGVITSGLPSPSLGGTNIAMGYIKQGLHKKGTEVGVVVRNKVRKATVVGM 467
Query: 399 PFVPTKYY-KPS 409
P+V +K+Y KPS
Sbjct: 468 PWVESKFYRKPS 479
>TIGR_CMR|CHY_0489 [details] [associations]
symbol:CHY_0489 "glycine cleavage system T protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004047 "aminomethyltransferase activity" evidence=ISS]
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
InterPro:IPR022903 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 HOGENOM:HOG000239380
TIGRFAMs:TIGR00528 HAMAP:MF_00259 RefSeq:YP_359347.1 HSSP:P27248
ProteinModelPortal:Q3AET7 SMR:Q3AET7 STRING:Q3AET7 GeneID:3727042
KEGG:chy:CHY_0489 PATRIC:21274127 OMA:KPAFWGR
BioCyc:CHYD246194:GJCN-490-MONOMER Uniprot:Q3AET7
Length = 360
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 148/370 (40%), Positives = 213/370 (57%)
Query: 35 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLK 94
ENLK+T L++ H+ G KMVPF GW MP+QY I+E + R + +FDVSHM + +
Sbjct: 2 ENLKRTPLYEEHIKLGAKMVPFGGWEMPVQYT-GILEEHMAVRTDVGMFDVSHMGEIEIT 60
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
GK F+ L+ DV+ L G T +GG++DD + K + LVVNA +D
Sbjct: 61 GKQAERFVNYLITNDVSRLNSGDVIYTTMCYPDGGTVDDLLAYKYSTERYLLVVNAANKD 120
Query: 155 KDLAHIEAHMKSFTAKGGDVS-WHIHDERSLLALQGPLAAPVLQHLTKDDLSKL-YFGEF 212
KDLAHI + + DV+ + DE + +ALQGP A +LQ LT DL+++ YFG F
Sbjct: 121 KDLAHILQY------RWDDVTVTDLSDETAEIALQGPRAQEILQKLTAFDLNQIKYFG-F 173
Query: 213 RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRL 272
+++ GV C ++RTGYTGEDGFEI A + +L V+ GLGARD+LR
Sbjct: 174 AEIEVAGVPCLVSRTGYTGEDGFEIYFAPNLATKIWNELLNLG---VKPAGLGARDTLRF 230
Query: 273 EAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--F 330
EA L LYG+++ +TP+EAGL WA+ K + + F+G E +L Q + G + VG
Sbjct: 231 EACLPLYGHELSAEITPLEAGLGWAV-KFNKED--FIGKEALLAQKNAGLKRKIVGLEMI 287
Query: 331 AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKA 390
G P + + V +++G +G +TSG F+P LKKN+AM V + GT+V + +RGK
Sbjct: 288 GAGIPRQGYEIVFNQRG--VGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTEVDVIIRGKG 345
Query: 391 YDGNITKMPF 400
+ PF
Sbjct: 346 VRARVISRPF 355
>TIGR_CMR|BA_4449 [details] [associations]
symbol:BA_4449 "glycine cleavage system T protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 eggNOG:COG0404 TIGRFAMs:TIGR00528
RefSeq:NP_846677.1 RefSeq:YP_021093.1 RefSeq:YP_030380.1
ProteinModelPortal:Q81M06 SMR:Q81M06 IntAct:Q81M06 DNASU:1087845
EnsemblBacteria:EBBACT00000011986 EnsemblBacteria:EBBACT00000017692
EnsemblBacteria:EBBACT00000020316 GeneID:1087845 GeneID:2818765
GeneID:2849651 KEGG:ban:BA_4449 KEGG:bar:GBAA_4449 KEGG:bat:BAS4131
HOGENOM:HOG000239381 OMA:LGARDVC ProtClustDB:PRK00389
BioCyc:BANT260799:GJAJ-4187-MONOMER
BioCyc:BANT261594:GJ7F-4328-MONOMER HAMAP:MF_00259 Uniprot:Q81M06
Length = 366
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 144/379 (37%), Positives = 215/379 (56%)
Query: 37 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGK 96
L++T L D + GGK + F GW +P+Q+ SI E R LFDVSHM + +KG
Sbjct: 4 LQRTPLFDVYAKYGGKTIDFGGWELPVQFS-SIKEEHEAVRTAAGLFDVSHMGEVEVKGV 62
Query: 97 DCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
D + FL+++V DV+ L G T ENGG++DD +I K ++ LV+NA +KD
Sbjct: 63 DSLAFLQRVVTNDVSTLKVGGAQYTAMCYENGGTVDDLLIYKRGEEDYLLVINASNIEKD 122
Query: 157 LAHIEAHMKSFTAKGGDVSW-HIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFR-- 213
+ +H+ GD + ++ E + LA+QGP A +LQ + +DL ++ F +F+
Sbjct: 123 YEWLASHVI------GDATVVNVSSEVAQLAIQGPKAEGILQKVVSEDLKEIKFFKFKND 176
Query: 214 ILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEK-SEGKVRLTGLGARDSLRL 272
IL ++G+ ++RTGYTGEDGFEI SE A L + +LE +E ++ GLGARD+LR
Sbjct: 177 IL-VDGIPALVSRTGYTGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRF 235
Query: 273 EAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--F 330
EA L LYG ++ + +TP+EAG+ +A+ + A+ F G + +Q + G P + VG
Sbjct: 236 EATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVI 293
Query: 331 AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKA 390
G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K
Sbjct: 294 ERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR 351
Query: 391 YDGNITKMPFVPTKYYKPS 409
K VPT +YK S
Sbjct: 352 -----VKAVVVPTPFYKRS 365
>UNIPROTKB|C9JXJ4 [details] [associations]
symbol:AMT "Aminomethyltransferase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571 GO:GO:0005737
EMBL:AC104452 GO:GO:0004047 GO:GO:0006546 PANTHER:PTHR13847:SF5
HOGENOM:HOG000239380 IPI:IPI00925396 HGNC:HGNC:473 ChiTaRS:AMT
ProteinModelPortal:C9JXJ4 SMR:C9JXJ4 STRING:C9JXJ4
Ensembl:ENST00000430521 ArrayExpress:C9JXJ4 Bgee:C9JXJ4
Uniprot:C9JXJ4
Length = 262
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 121/225 (53%), Positives = 154/225 (68%)
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
G D V +E LV+ D+A L P GTL++FTNE GG +DD ++T + H+Y+V NAGC +
Sbjct: 35 GSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWE 94
Query: 155 KDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI 214
KDLA ++ ++ +G DV + D +LLALQGP AA VLQ DDL KL F +
Sbjct: 95 KDLALMQDKVRELQNQGRDVGLEVLDN-ALLALQGPTAAQVLQAGVADDLRKLPFMTSAV 153
Query: 215 LDINGVS-CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLE 273
+++ GVS C +TR GYTGEDG EISVP AV LA AIL+ E V+L GL ARDSLRLE
Sbjct: 154 MEVFGVSGCRVTRCGYTGEDGVEISVPVAGAVHLATAILKNPE--VKLAGLAARDSLRLE 211
Query: 274 AGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQL 318
AGLCLYGND+++H TPVE L+W +GKRRRA F GA+ I+ QL
Sbjct: 212 AGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQL 256
>TIGR_CMR|CPS_1274 [details] [associations]
symbol:CPS_1274 "glycine cleavage system T protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 HSSP:P27248 RefSeq:YP_268017.1
ProteinModelPortal:Q486J8 SMR:Q486J8 STRING:Q486J8 GeneID:3522650
KEGG:cps:CPS_1274 PATRIC:21465783 OMA:WSIAWEP
BioCyc:CPSY167879:GI48-1355-MONOMER Uniprot:Q486J8
Length = 362
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 150/366 (40%), Positives = 197/366 (53%)
Query: 39 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDC 98
KT LH H+A+G KMV F GW MPI Y I E R + +FDVSHM + ++G D
Sbjct: 4 KTVLHAKHLASGAKMVDFFGWDMPINYGSQIEEHHA-VRTDAGMFDVSHMTIVDVQGADA 62
Query: 99 VPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDL 157
FL +LVI DVA LA PG T NE GG IDD +I D LVVN+ R KDL
Sbjct: 63 KAFLRRLVINDVAKLATPGKALYTGMLNEEGGVIDDLIIYFFSDTDYRLVVNSATRVKDL 122
Query: 158 AHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA-APVLQHLTKDDLSKLYFGEFRILD 216
A + K T G D++ E +LA+QGP A A V + LT + + + G
Sbjct: 123 AWMT---KQST--GFDITITERPEFGMLAVQGPEAKAKVAKLLTAEQIEAVE-GMKPFFG 176
Query: 217 INGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGL 276
+ F+ TGYTGEDG+EI VP+ A D + +L+ EG V GLGARD+LRLEAG+
Sbjct: 177 VQVGDLFIATTGYTGEDGYEIIVPNNSAEDFWQKLLD--EGVVPC-GLGARDTLRLEAGM 233
Query: 277 CLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA 336
LYG DM++ V+P+ A + W I + F+G + + Q G + VG
Sbjct: 234 NLYGLDMDETVSPLAANMAWTISWEP-TDRDFIGRDVLTAQKAAGDQPKLVGLVLEAKGV 292
Query: 337 -RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNI 395
RSH V E GN GEITSG FSP L ++A+ V + K G +++E+R K +
Sbjct: 293 LRSHQVVVTEFGN--GEITSGTFSPTLGHSVALARVPRSV-KVGDTIEVEMRKKLIKVQV 349
Query: 396 TKMPFV 401
TK FV
Sbjct: 350 TKPSFV 355
>GENEDB_PFALCIPARUM|PF13_0345 [details] [associations]
symbol:PF13_0345 "aminomethyltransferase,
mitochondrial precursor" species:5833 "Plasmodium falciparum"
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739
EMBL:AL844509 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380
OMA:KPAFWGR ProtClustDB:CLSZ2429438 RefSeq:XP_001350365.1
ProteinModelPortal:Q8I6T0 PRIDE:Q8I6T0
EnsemblProtists:PF13_0345:mRNA GeneID:814304 KEGG:pfa:PF13_0345
EuPathDB:PlasmoDB:PF3D7_1365500 Uniprot:Q8I6T0
Length = 406
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 133/404 (32%), Positives = 217/404 (53%)
Query: 21 DKKTIARRHFASDAE---NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNC 76
++ T R+ F++ + +KKT L+D H N G+ +P +YKD +++ S L+
Sbjct: 9 NRLTFFRKGFSTTNKPKVEIKKTILYDSHKKNNAIFKIQHGFYLPDEYKDITLITSNLHT 68
Query: 77 RQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
R N SLFD ++ L + G+D + F+EK V +D+ GL +++ N+ GG IDD +I
Sbjct: 69 RTNCSLFDYTYRPILKISGEDKINFIEKYVGSDIKGLWENECRISLLLNDKGGIIDDIMI 128
Query: 137 TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD--ERSLLALQGPLAAP 194
+++ ++ L +N C++K + ++K + G + I + S + +QG ++
Sbjct: 129 I-LREKYLLLYLNIQCKEK----VYKYLKDKLLENGKLQVQIEEFTSHSSICIQGSKSSD 183
Query: 195 VLQHL-------TKDDLSKLYFGEFRILDINGV-SCFLTRTGYTGEDGFEISVPSERAVD 246
VL+ L + +L F + IN + +C L R TGEDGF+I +P++ D
Sbjct: 184 VLKELIDYNNESVETNLDNCSFMSSTLTKINKIDNCILNRYTCTGEDGFDILIPNKYVND 243
Query: 247 LAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG 306
L IL K+E V+ GL +++LRLE+G C YG D+ + +TP+E+ W++G+RR E
Sbjct: 244 LYNLIL-KNE-LVKPGGLAVQNTLRLESGFCEYGKDINEDITPIESNYKWSLGQRRLKEL 301
Query: 307 GFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKV--HDEQGNPIGEITSGGFSPCLK 363
F GA I+ Q+ G ++RVG + ++K+ H+ IG ITS FSP L+
Sbjct: 302 NFNGAHIIMDQIKNGTKIKRVGILINTNIVPKENTKIYSHENAEQIIGYITSSVFSPVLQ 361
Query: 364 KNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 407
K I MGYVKS +K++ K ITK+PFVP YK
Sbjct: 362 KPICMGYVKSEYAHINNLIKVDCLNKLEIAQITKLPFVPLSIYK 405
>UNIPROTKB|Q8I6T0 [details] [associations]
symbol:PF13_0345 "Aminomethyltransferase, mitochondrial"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR006222 InterPro:IPR006223
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005739 EMBL:AL844509
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
KO:K00605 PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 OMA:KPAFWGR
ProtClustDB:CLSZ2429438 RefSeq:XP_001350365.1
ProteinModelPortal:Q8I6T0 PRIDE:Q8I6T0
EnsemblProtists:PF13_0345:mRNA GeneID:814304 KEGG:pfa:PF13_0345
EuPathDB:PlasmoDB:PF3D7_1365500 Uniprot:Q8I6T0
Length = 406
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 133/404 (32%), Positives = 217/404 (53%)
Query: 21 DKKTIARRHFASDAE---NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNC 76
++ T R+ F++ + +KKT L+D H N G+ +P +YKD +++ S L+
Sbjct: 9 NRLTFFRKGFSTTNKPKVEIKKTILYDSHKKNNAIFKIQHGFYLPDEYKDITLITSNLHT 68
Query: 77 RQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
R N SLFD ++ L + G+D + F+EK V +D+ GL +++ N+ GG IDD +I
Sbjct: 69 RTNCSLFDYTYRPILKISGEDKINFIEKYVGSDIKGLWENECRISLLLNDKGGIIDDIMI 128
Query: 137 TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHD--ERSLLALQGPLAAP 194
+++ ++ L +N C++K + ++K + G + I + S + +QG ++
Sbjct: 129 I-LREKYLLLYLNIQCKEK----VYKYLKDKLLENGKLQVQIEEFTSHSSICIQGSKSSD 183
Query: 195 VLQHL-------TKDDLSKLYFGEFRILDINGV-SCFLTRTGYTGEDGFEISVPSERAVD 246
VL+ L + +L F + IN + +C L R TGEDGF+I +P++ D
Sbjct: 184 VLKELIDYNNESVETNLDNCSFMSSTLTKINKIDNCILNRYTCTGEDGFDILIPNKYVND 243
Query: 247 LAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG 306
L IL K+E V+ GL +++LRLE+G C YG D+ + +TP+E+ W++G+RR E
Sbjct: 244 LYNLIL-KNE-LVKPGGLAVQNTLRLESGFCEYGKDINEDITPIESNYKWSLGQRRLKEL 301
Query: 307 GFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKV--HDEQGNPIGEITSGGFSPCLK 363
F GA I+ Q+ G ++RVG + ++K+ H+ IG ITS FSP L+
Sbjct: 302 NFNGAHIIMDQIKNGTKIKRVGILINTNIVPKENTKIYSHENAEQIIGYITSSVFSPVLQ 361
Query: 364 KNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 407
K I MGYVKS +K++ K ITK+PFVP YK
Sbjct: 362 KPICMGYVKSEYAHINNLIKVDCLNKLEIAQITKLPFVPLSIYK 405
>TIGR_CMR|CBU_1716 [details] [associations]
symbol:CBU_1716 "glycine cleavage system T protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 InterPro:IPR022903
Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_820697.2
ProteinModelPortal:Q83B06 SMR:Q83B06 PRIDE:Q83B06 GeneID:1209627
KEGG:cbu:CBU_1716 PATRIC:17932163
BioCyc:CBUR227377:GJ7S-1688-MONOMER Uniprot:Q83B06
Length = 363
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 142/369 (38%), Positives = 188/369 (50%)
Query: 38 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKD 97
+ + L++ H V FAGW MP+ Y I E RQ +FDVSHM + L+G++
Sbjct: 3 RHSPLYEEHAKAKAHFVDFAGWEMPLHYGSQIEEHH-QVRQRAGIFDVSHMGVIDLEGEE 61
Query: 98 CVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
FL L+ DVA L+ G T N GG IDD ++ +V LVVNA RDKD
Sbjct: 62 ATAFLRYLLANDVAKLSDVGRALYTCMLNPQGGVIDDLIVYRVAPTGYRLVVNAATRDKD 121
Query: 157 LAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDL-SKLY-FGEFRI 214
+A I+ G VS E +LA+QGP A + + + L ++L F
Sbjct: 122 IAWIKEK-----GAGYKVSISERPEMCILAVQGPQAIAAAKSIFDEALYAQLEALKPFHF 176
Query: 215 LDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEA 274
+ + RTGYTGEDG EI VP+ RA DL + + V+ GLGARD+LRLEA
Sbjct: 177 ISSPTRDLQIARTGYTGEDGLEIIVPASRATDLWARFVHQG---VKPCGLGARDTLRLEA 233
Query: 275 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGP 334
GL LYG DM++ +P+ + L+W + A+ F+G + KQLDE R +G P
Sbjct: 234 GLNLYGTDMDETTSPLISNLSWTVSWND-ADRNFIGRRALEKQLDENVKERLIGLVMEEP 292
Query: 335 PA-RSHSKVH-DEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYD 392
R+H KV E G G ITSGGFSP L IA+ V G + T +E RGK
Sbjct: 293 GILRNHQKVWLTEDGE--GIITSGGFSPTLGHAIALARVPVGEVEKAT---VERRGKKIP 347
Query: 393 GNITKMPFV 401
I K PFV
Sbjct: 348 VKIIKPPFV 356
>TIGR_CMR|GSU_0375 [details] [associations]
symbol:GSU_0375 "glycine cleavage system T protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0006546
"glycine catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
GO:GO:0008483 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 KO:K00605
PANTHER:PTHR13847:SF5 HOGENOM:HOG000239380 TIGRFAMs:TIGR00528
OMA:QRYAMFT RefSeq:NP_951434.1 ProteinModelPortal:Q74G72
GeneID:2685714 KEGG:gsu:GSU0375 PATRIC:22023494
ProtClustDB:CLSK924396 BioCyc:GSUL243231:GH27-391-MONOMER
Uniprot:Q74G72
Length = 362
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 126/366 (34%), Positives = 181/366 (49%)
Query: 35 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLK 94
+ L T L H M PF GW+MPIQY+ I E CR+ SLFD+ HM
Sbjct: 2 DTLASTPLRIEHERLNALMAPFGGWNMPIQYEGIIAEHRW-CREKASLFDICHMGEFLFT 60
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
G LE + VA + G N +GG +DD ++ ++ + +VVNA
Sbjct: 61 GDIIADGLEDVFTFSVASIPVGRSRYGFLLNGDGGIMDDLIVFRLAQNEAMVVVNAATIG 120
Query: 155 KDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRI 214
KD A I A + GG I + L LQGPL+ VL + +++ + + +F
Sbjct: 121 KDFAAISARL------GGGGFQDISAATAKLDLQGPLSREVLVEVIGPEIAAIPYFKFIR 174
Query: 215 LDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEA 274
+ G ++RTGYTGE G+EI +PS+R V+L + +L ++ +VR GLGARD LRLE
Sbjct: 175 TKVLGADAIVSRTGYTGELGYEIFLPSDRVVELWQRLL--ADPRVRPAGLGARDVLRLEV 232
Query: 275 GLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGP 334
G LYG+D+++ TP+EAGL + + F+G + +L Q EG RRV F
Sbjct: 233 GYSLYGSDIDESTTPLEAGLESFVS----FDKSFVGKDALLAQRAEGVMRRRVAFQVASR 288
Query: 335 PARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGN 394
+ H QG +G +TSG FSP L + +GYV G G + I + D
Sbjct: 289 RSPRHDYEILFQGEQVGAVTSGVFSPMLGCGLGLGYVTPGTAVPGAPLTIRHERVSMDAT 348
Query: 395 ITKMPF 400
+ PF
Sbjct: 349 VVDAPF 354
>UNIPROTKB|P27248 [details] [associations]
symbol:gcvT species:83333 "Escherichia coli K-12"
[GO:0019464 "glycine decarboxylation via glycine cleavage system"
evidence=ISS] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008483
"transaminase activity" evidence=IEA] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U28377 GO:GO:0004047 InterPro:IPR013977 Pfam:PF08669
GO:GO:0019464 KO:K00605 PANTHER:PTHR13847:SF5 EMBL:X73958
EMBL:M97263 PDB:3A8I PDB:3A8J PDB:3A8K PDBsum:3A8I PDBsum:3A8J
PDBsum:3A8K eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528
HOGENOM:HOG000239381 ProtClustDB:PRK00389 HAMAP:MF_00259 PIR:A56689
RefSeq:NP_417381.1 RefSeq:YP_491106.1 PDB:1VLO PDBsum:1VLO
ProteinModelPortal:P27248 SMR:P27248 IntAct:P27248 PaxDb:P27248
PRIDE:P27248 EnsemblBacteria:EBESCT00000001707
EnsemblBacteria:EBESCT00000016229 GeneID:12933349 GeneID:947390
KEGG:ecj:Y75_p2837 KEGG:eco:b2905 PATRIC:32121224 EchoBASE:EB1412
EcoGene:EG11442 BioCyc:EcoCyc:GCVT-MONOMER
BioCyc:ECOL316407:JW2873-MONOMER BioCyc:MetaCyc:GCVT-MONOMER
EvolutionaryTrace:P27248 Genevestigator:P27248 Uniprot:P27248
Length = 364
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 130/369 (35%), Positives = 193/369 (52%)
Query: 38 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKD 97
++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G
Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSR 61
Query: 98 CVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KD
Sbjct: 62 TREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKD 121
Query: 157 LAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILD 216
L+ I H + F G +++ + D+ S++A+QGP A L D + G
Sbjct: 122 LSWITQHAEPF---GIEIT--VRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFG 176
Query: 217 INGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGL 276
+ F+ TGYTGE G+EI++P+E+A D +A++E V+ GLGARD+LRLEAG+
Sbjct: 177 VQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGM 233
Query: 277 CLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA 336
LYG +M++ ++P+ A + W I A+ F+G E + Q + G + VG
Sbjct: 234 NLYGQEMDETISPLAANMGWTIAWEP-ADRDFIGREALEVQREHGTE-KLVGLVMTEKGV 291
Query: 337 -RSHSKVH--DEQGNPI-GEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYD 392
R+ V D QGN G ITSG FSP L +IA+ V G+ G +++R +
Sbjct: 292 LRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMP 348
Query: 393 GNITKMPFV 401
+TK FV
Sbjct: 349 VKVTKPVFV 357
>TIGR_CMR|SO_0779 [details] [associations]
symbol:SO_0779 "glycine cleavage system T protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0005960
"glycine cleavage complex" evidence=ISS] [GO:0006546 "glycine
catabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0008483 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 OMA:KALYGGM TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 RefSeq:NP_716410.1
ProteinModelPortal:Q8EIQ8 SMR:Q8EIQ8 GeneID:1168634
KEGG:son:SO_0779 PATRIC:23521231 Uniprot:Q8EIQ8
Length = 364
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 129/368 (35%), Positives = 179/368 (48%)
Query: 39 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDC 98
KT L + H+ + KMV F GW MP+ Y I E RQ+ +FDVSHM + + G D
Sbjct: 4 KTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGTDA 62
Query: 99 VPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDL 157
FL KL+ DVA L PG ++N G IDD + + D +VVN+ R+KDL
Sbjct: 63 CAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDL 122
Query: 158 AHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDI 217
A I + F DV+ E +++A+QGP A + + + G
Sbjct: 123 AWIAKQSQGF-----DVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIEGMKPFFGK 177
Query: 218 NGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLC 277
S F+ TGYTGE G+EI VP A L +A+L++ V+ GLGARD+LRLEAG+
Sbjct: 178 QAGSLFIATTGYTGEAGYEIIVPETEAEALWQALLDQG---VKPCGLGARDTLRLEAGMN 234
Query: 278 LYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPAR 337
LYG DM++ + P+ A + W I + F+G K L+ L + + VG
Sbjct: 235 LYGLDMDETINPLAANMGWTIAWEP-TDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVL 292
Query: 338 SHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDG 393
H D G G ITSG FSP L +IAM V S + G ++E+R K
Sbjct: 293 RHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVPSSI---GDTAEVEMRKKRVAV 349
Query: 394 NITKMPFV 401
+ FV
Sbjct: 350 RVVAPNFV 357
>UNIPROTKB|P64220 [details] [associations]
symbol:gcvT "Aminomethyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR006222
InterPro:IPR006223 InterPro:IPR022903 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
GO:GO:0008483 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842579 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
eggNOG:COG0404 TIGRFAMs:TIGR00528 HOGENOM:HOG000239381
ProtClustDB:PRK00389 HAMAP:MF_00259 OMA:KPAFWGR PIR:D70786
RefSeq:NP_216727.1 RefSeq:NP_336739.1 RefSeq:YP_006515631.1
ProteinModelPortal:P64220 SMR:P64220
EnsemblBacteria:EBMYCT00000003464 EnsemblBacteria:EBMYCT00000070612
GeneID:13318900 GeneID:887233 GeneID:924158 KEGG:mtc:MT2267
KEGG:mtu:Rv2211c KEGG:mtv:RVBD_2211c PATRIC:18126736
TubercuList:Rv2211c Uniprot:P64220
Length = 367
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 123/381 (32%), Positives = 185/381 (48%)
Query: 32 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGL 91
SD L L D H G F GW MP+ Y ++ E R LFDVSH+
Sbjct: 2 SDVPELIHGPLEDRHRELGASFAEFGGWLMPVSYAGTVSEHNAT-RTAVGLFDVSHLGKA 60
Query: 92 SLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAG 151
++G F+ + D+ + PG T+ E+GG IDD + V DD I+LV NA
Sbjct: 61 LVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIFLVPNAA 120
Query: 152 CRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHL-TKDDLSKLYFG 210
+ A + +++ A GG ++H ++LA+QGP + VL L ++ Y G
Sbjct: 121 ----NTAAVVGALQA-AAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMD--YMG 173
Query: 211 EFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEK-SEGKVRLTGLGARDS 269
+ +GV + RTGYTGE G+E+ P E A + A+L S GLGARD+
Sbjct: 174 -YADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDT 232
Query: 270 LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP--VRRV 327
LR E G L+G+++ ++P++A WA+G R+ A F G +L + GP +R +
Sbjct: 233 LRTEMGYPLHGHELSLDISPLQARCGWAVGWRKDA---FFGRAALLAEKAAGPRRLLRGL 289
Query: 328 GFFAGGP--PARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKS--GLHKAGTKVK 383
G P + V DE +G TSG FSP L+ I + + S G+ G ++
Sbjct: 290 RMVGRGVLRPGLA-VLVGDET---VGVTTSGTFSPTLQVGIGLALIDSDAGIED-GQQIN 344
Query: 384 IEVRGKAYDGNITKMPFVPTK 404
++VRG+A + + PFV K
Sbjct: 345 VDVRGRAVECQVVCPPFVAVK 365
>UNIPROTKB|E1BSV1 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:AADN02046136 EMBL:AADN02046137 EMBL:AADN02046138
EMBL:AADN02046139 EMBL:AADN02046140 EMBL:AADN02046141
EMBL:AADN02046142 IPI:IPI00588243 ProteinModelPortal:E1BSV1
Ensembl:ENSGALT00000007151 Uniprot:E1BSV1
Length = 862
Score = 321 (118.1 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 105/338 (31%), Positives = 167/338 (49%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVIT 137
+ + D+S +KG D V L+ L A+VA T + T + G + ++
Sbjct: 523 ERAGVIDLSPFGKFKVKGTDSVKLLDHL-FANVANKVGSTNISHMLTPK-GKVYAELTVS 580
Query: 138 KVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG---DVSWHIHDERSLLALQGPLAAP 194
++ LV +G DL IE + +GG ++ ++ DE +L + GP A
Sbjct: 581 QLYPGEFMLVTGSGSELHDLRWIEEEV----VRGGYKVEIE-NMTDEMGVLGVAGPYARQ 635
Query: 195 VLQHLTKDDLS--KLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAIL 252
VLQ LT +DLS F + R L ++ ++ R YTGE G+E+ E +V L AI+
Sbjct: 636 VLQRLTAEDLSDGSFKFLQSRHLKLSDIAVTAIRISYTGELGWELYHRKEDSVALYNAIM 695
Query: 253 E--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLG 310
+ + EG + G A ++LRLE G +G +M P+EAGL + + + A+ F+G
Sbjct: 696 DAGQKEG-IDNFGTYALNALRLEKGFRAWGAEMNCDTNPLEAGLEYFVKLNKPAD--FIG 752
Query: 311 AEKILKQLDEGPPVRRVGFFA----GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNI 366
+K+LKQ+ E RR+ + P + S H+ G IG TSG FS K+++
Sbjct: 753 -KKMLKQIKEKGLKRRLVYLTLETDDVDPEGNESVWHN--GKVIGNTTSGSFSYSAKQSL 809
Query: 367 AMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
A YV + L K G K+++E+ GK Y I + P V T+
Sbjct: 810 AFAYVPTELSKVGQKLEVELLGKNYSATIIQEPLVLTE 847
>TIGR_CMR|SPO_1562 [details] [associations]
symbol:SPO_1562 "glycine cleavage system T protein,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0019464
"glycine decarboxylation via glycine cleavage system" evidence=ISS]
InterPro:IPR006222 InterPro:IPR006223 Pfam:PF01571
PIRSF:PIRSF006487 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 HOGENOM:HOG000239381
RefSeq:YP_166803.1 ProteinModelPortal:Q5LT52 GeneID:3192949
KEGG:sil:SPO1562 PATRIC:23376443 OMA:SIDELEW ProtClustDB:CLSK864700
Uniprot:Q5LT52
Length = 381
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 106/386 (27%), Positives = 169/386 (43%)
Query: 38 KKTALHDFHVANGGKMVPFAG-WSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGK 96
K+T HD + + G W +E CR+ + D+S + + G
Sbjct: 3 KQTGFHDRFARFTENFIEYNGFWLANCMSTAGPIEEYHACREKCVVLDLSALRKFEITGP 62
Query: 97 DCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 156
D + + ++ L G T +GG IDD + ++ D+ + + +
Sbjct: 63 DSEALCQYIFTRNMKTLPVGGVVYTAMCYPHGGMIDDGTVFRLGKDNFRWIGGSDYGGEW 122
Query: 157 LAH--IEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQ-------HLTK-DDLSK 206
+ E +K D+ H+ +A+QGP + +L+ H K ++L
Sbjct: 123 IREKAAELGLKVLVRSSTDMQ---HN----IAVQGPESRELLKKVIWTAPHQPKFEELGW 175
Query: 207 LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGK-VRLTGLG 265
F RI D GV ++RTGYTGE G+EI + A + A+ E + +R GL
Sbjct: 176 FRFAPARIGDDQGVPVVVSRTGYTGELGYEIFCHPKHAGAVFDAVWEAGQAHGIRPMGLE 235
Query: 266 ARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVR 325
A D +R+EAGL G D P EAG+ + + + + + F+G E ++++ E P
Sbjct: 236 ALDMVRIEAGLIFAGYDFSDQTDPFEAGIGFTVPLKSKPDD-FIGREALIRR-KEHPARV 293
Query: 326 RVGFFAGGPPARSHSK-VHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKI 384
VG H VH + IGE+TS SP L KNIA+ V H+ GT+V+I
Sbjct: 294 LVGLDIDSNVDVGHGDCVHIGRAQ-IGEVTSSMRSPILGKNIALARVDVAHHEVGTRVEI 352
Query: 385 EVRGKAYDGNITKMP--FVPTKYYKP 408
GK DG+ ++P VP +Y P
Sbjct: 353 ---GKL-DGHQKRLPATIVPFAHYDP 374
>ZFIN|ZDB-GENE-080227-8 [details] [associations]
symbol:dmgdh "dimethylglycine dehydrogenase"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 ZFIN:ZDB-GENE-080227-8
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 EMBL:BC155630 IPI:IPI00511660
UniGene:Dr.5571 ProteinModelPortal:A9JRE6 STRING:A9JRE6
Uniprot:A9JRE6
Length = 875
Score = 291 (107.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 94/334 (28%), Positives = 156/334 (46%)
Query: 82 LFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSVITKV 139
+ D+S + + G D L++L+ A P G + G + +T
Sbjct: 542 VIDLSPFGKMKVTGADSERLLDRLL----ANTLPKVGQTNISHMLTPRGRVYAELTVTHT 597
Query: 140 KDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVS-WHIHDERSLLALQGPLAAPVLQ 197
+ L+ +G DL IE A GG DV ++ DE +L + GP A +LQ
Sbjct: 598 QPGEFLLITGSGSELHDLRWIERE----AADGGYDVCVTNVTDEIGVLGIAGPKARTILQ 653
Query: 198 HLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKS 255
LT DLS+ F + R +++ G + R YTGE G+E+ + + +A++E
Sbjct: 654 KLTSADLSESGFRFLQCRTIELAGATVQAIRISYTGELGWELYMDMRNMSAVYQALMEAG 713
Query: 256 EGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI 314
+ + G A +SLRLE G +G +M P+EAGL + I + A+ F+G + +
Sbjct: 714 RDENIDDFGTYAMNSLRLEKGFRAWGAEMNCDTNPLEAGLDYFIKLNKPAD--FIGKQAL 771
Query: 315 LKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGY 370
L+ +G RR+ F P + S H+ G +G TSG +S +++A Y
Sbjct: 772 LEIKAQGLS-RRLAFLTLNTDDIDPEGNESVWHN--GEVVGNTTSGSYSYSTHQSVAFAY 828
Query: 371 VKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+ GL + G KV++E+ G+ Y +TK P + T+
Sbjct: 829 LPVGLTQLGQKVEVELLGQKYSATVTKEPLILTE 862
>TIGR_CMR|SPO_2345 [details] [associations]
symbol:SPO_2345 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368 PRINTS:PR00469
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 HOGENOM:HOG000218134 KO:K00302 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_167568.1 ProteinModelPortal:Q5LQY7
GeneID:3193813 KEGG:sil:SPO2345 PATRIC:23378057 OMA:RYGLALW
ProtClustDB:CLSK836134 Uniprot:Q5LQY7
Length = 1010
Score = 282 (104.3 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 103/385 (26%), Positives = 167/385 (43%)
Query: 37 LKKTALHDFHVANGGKMVPFAGWSMPIQY-------KDSIMESTLNCRQNGSLFDVSHMC 89
++KT ++D+ ANG P W P Y D++ N R+N L D S +
Sbjct: 616 VRKTPIYDWSNANGADWEPVGQWRRPFAYVRPGESVHDAVNREVKNTRENLGLLDASTLG 675
Query: 90 GLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVN 149
L +KG D FL+ L ++ L PG + +ENG IDD V+ ++ +D
Sbjct: 676 KLIVKGPDAGKFLDMLYTNMMSTLKPGKCRYGLMCSENGFLIDDGVVARIDEDTFLCHTT 735
Query: 150 AGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKD-----DL 204
G ++ H+E +++ ++ ++ + +A+ GP A VL+ L DL
Sbjct: 736 TGGAERIHGHMEEWLQTEWWDWKVYVANVTEQYAQIAVVGPKARKVLEKLNAKAGGGMDL 795
Query: 205 S--KLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKS-EGKVRL 261
S L F E+R I R ++GE +EI+VP+ + + +A+++ E V
Sbjct: 796 SVEALPFMEWRDGRIGEFDARAYRISFSGELSYEIAVPASQGLAFWEALVDAGKEFGVMP 855
Query: 262 TGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI-LKQLDE 320
G LR E G + G++ + V P + GL WA+ K++ G E+ + D
Sbjct: 856 YGTETLHILRAEKGFIMIGDETDGTVIPQDLGLHWALSKKKDDYLGKRAQERSHMADRDR 915
Query: 321 GPPV--RRV--GFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH 376
V V G A + Q N IG +TS +S L + IAMG ++ G
Sbjct: 916 WKLVGLETVDGSVLPDGAYAVGEGVNANGQRNMIGRVTSTYYSANLGRGIAMGLIQHGPD 975
Query: 377 KAGTKVKIE-VRGKAYDGNITKMPF 400
+ G V+ GK+Y I F
Sbjct: 976 RMGEIVEFPGTDGKSYKAKIVDPVF 1000
>UNIPROTKB|Q9UI17 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0006579 "amino-acid betaine catabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IMP]
[GO:0019695 "choline metabolic process" evidence=NAS] [GO:0005759
"mitochondrial matrix" evidence=NAS] [GO:0047865 "dimethylglycine
dehydrogenase activity" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=NAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 GO:GO:0009055
GO:GO:0050660 GO:GO:0005759 GO:GO:0019695 EMBL:AC020937
GO:GO:0006544 GO:GO:0006579 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 EMBL:AF111858 EMBL:AK314736 IPI:IPI00296196
RefSeq:NP_037523.2 UniGene:Hs.655653 ProteinModelPortal:Q9UI17
SMR:Q9UI17 STRING:Q9UI17 PhosphoSite:Q9UI17 DMDM:296434575
PaxDb:Q9UI17 PRIDE:Q9UI17 DNASU:29958 Ensembl:ENST00000255189
GeneID:29958 KEGG:hsa:29958 UCSC:uc003kfs.3 CTD:29958
GeneCards:GC05M078293 H-InvDB:HIX0200737 HGNC:HGNC:24475
HPA:HPA036442 MIM:605849 MIM:605850 neXtProt:NX_Q9UI17
Orphanet:243343 PharmGKB:PA134947212 HOGENOM:HOG000251716
HOVERGEN:HBG081945 InParanoid:Q9UI17 KO:K00315 OMA:REVGKMI
OrthoDB:EOG466VK7 PhylomeDB:Q9UI17 GenomeRNAi:29958 NextBio:52675
ArrayExpress:Q9UI17 Bgee:Q9UI17 CleanEx:HS_DMGDH
Genevestigator:Q9UI17 GermOnline:ENSG00000132837 GO:GO:0047865
Uniprot:Q9UI17
Length = 866
Score = 267 (99.0 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 98/339 (28%), Positives = 158/339 (46%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q ++ D+S ++KG+D + L+ L A + P G + G +
Sbjct: 527 QRVAVTDLSPFGKFNIKGQDSIRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 582
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE KGG DV +I DE +L + GP A
Sbjct: 583 VSHQSPGEFLLITGSGSELHDLRWIEEE----AVKGGYDVEIKNITDELGVLGVAGPQAR 638
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E +V L AI
Sbjct: 639 KVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAI 698
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+ + EG + G A ++LRLE +G +M P+EAGL + + + A+ F+
Sbjct: 699 MNAGQEEG-IDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFVKLNKPAD--FI 755
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ RR+ P + S ++ G +G TSG +S ++K+
Sbjct: 756 G-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYN--GKVVGNTTSGSYSYSIQKS 812
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+A YV L + G +V++E+ GK Y I + P V T+
Sbjct: 813 LAFAYVPVQLSEVGQQVEVELLGKNYPAVIIQEPLVLTE 851
>MGI|MGI:1921379 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase precursor"
species:10090 "Mus musculus" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006544 "glycine metabolic
process" evidence=ISO] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0047865 "dimethylglycine dehydrogenase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
UniPathway:UPA00291 MGI:MGI:1921379 GO:GO:0005739 GO:GO:0050660
EMBL:AC131739 GO:GO:0006579 EMBL:CT030023 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0005542
eggNOG:COG0665 CTD:29958 HOGENOM:HOG000251716 HOVERGEN:HBG081945
KO:K00315 OMA:REVGKMI OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:AK004755
EMBL:BC024126 IPI:IPI00120123 RefSeq:NP_083048.1 UniGene:Mm.21789
ProteinModelPortal:Q9DBT9 SMR:Q9DBT9 STRING:Q9DBT9
PhosphoSite:Q9DBT9 PaxDb:Q9DBT9 PRIDE:Q9DBT9
Ensembl:ENSMUST00000048001 GeneID:74129 KEGG:mmu:74129
UCSC:uc007rll.1 GeneTree:ENSGT00530000063120 InParanoid:B1B1D0
NextBio:339854 Bgee:Q9DBT9 CleanEx:MM_DMGDH Genevestigator:Q9DBT9
GermOnline:ENSMUSG00000042102 Uniprot:Q9DBT9
Length = 869
Score = 267 (99.0 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 98/339 (28%), Positives = 160/339 (47%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q + D+S ++KG+D L+ L A + P G + G +
Sbjct: 520 QRVGVIDLSPFGKFNIKGRDSTQLLDHLF----ANVIPKVGFTNISHMLTPRGRVYAELT 575
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVS-WHIHDERSLLALQGPLAA 193
+++ L+ +G DL IE +F +GG DV +I DE +L + GP A
Sbjct: 576 VSQQSPGEFLLITGSGSELHDLRWIEE--AAF--RGGYDVEIQNITDEFGVLGVAGPYAR 631
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + +I+ + R YTGE G+E+ E + L + I
Sbjct: 632 RVLQKLTSEDLSDDAFKFLQTKSFNISDIPVTAIRISYTGELGWELYHRREDSATLYERI 691
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+ + EG + G A ++LRLE +G++M P+EAGL + + + A+ F+
Sbjct: 692 MSAGQEEG-IGDFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLEYFVKLNKPAD--FI 748
Query: 310 GAEKILKQLD-EGPPVRRVGFFAGGP---PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ EG R V P + S + +G +G TSG +S ++K+
Sbjct: 749 G-KQALKQIKTEGLKRRLVCLTVATDDVDPEGNESIWY--KGKVVGNTTSGSYSYSIQKS 805
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+A YV L + G +V++E+ GK Y I + P V T+
Sbjct: 806 LAFAYVPVQLSEVGQQVEVELLGKNYPATIIQEPLVLTE 844
>TIGR_CMR|CPS_2480 [details] [associations]
symbol:CPS_2480 "sarcosine oxidase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008115
"sarcosine oxidase activity" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF01571 Pfam:PF07992 PIRSF:PIRSF037980
PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 RefSeq:YP_269196.1 RefSeq:YP_270692.1
ProteinModelPortal:Q47WX9 STRING:Q47WX9 GeneID:3521446
GeneID:3522790 KEGG:cps:CPS_2480 KEGG:cps:CPS_4034 PATRIC:21468029
HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336
BioCyc:CPSY167879:GI48-2543-MONOMER
BioCyc:CPSY167879:GI48-4047-MONOMER PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 Uniprot:Q47WX9
Length = 1007
Score = 264 (98.0 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 94/390 (24%), Positives = 162/390 (41%)
Query: 40 TALHDFHVANGGKMVPFAGWSMPIQYKD--SIMESTLN--C---RQNGSLFDVSHMCGLS 92
+A+H +H+ NG + W P + M+ +L C R + + D S + +
Sbjct: 620 SAMHKWHLENGAEFEDVGQWKRPWYFPQPGETMQQSLERECLATRNSVGILDASTLGKID 679
Query: 93 LKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGC 152
++GKD FL ++ + L G V E+G DD V + D+ + G
Sbjct: 680 IQGKDAREFLNRVYTNPWSKLGVGKCRYGVMCKEDGMVFDDGVTVCLDDNRFIMTTTTGG 739
Query: 153 RDKDLAHIEA-HMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFG- 210
L +E H + S + D S + + GP + VL+ + D+S F
Sbjct: 740 AAGVLQWLELWHQTEWPELEVYFST-VTDHWSTMTISGPNSRKVLEKICDIDVSNDSFKY 798
Query: 211 -EFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDS 269
++R + GV + R +TGE FEI+V + + KA++ E + +T G
Sbjct: 799 MDWRAATVAGVKARIFRISFTGELSFEINVQANYGMHAWKAVMAAGE-EFNITPYGTETM 857
Query: 270 --LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRR- 326
LR E G + G D + VTP + + W +GK++ + F+G ++ + D R+
Sbjct: 858 HILRAEKGFIIVGQDTDGSVTPQDLDMDWVVGKKK--DFSFIG-KRSWTRFDNKRDDRKQ 914
Query: 327 -VGFFAGGP----PARSHSKVHDEQGNP---IGEITSGGFSPCLKKNIAMGYVKSGLHKA 378
VG P P + Q P +G +TS +S C+ + A+ VK G+ +
Sbjct: 915 MVGLKPKDPTFVLPEGAQIVFEKNQSIPMKMVGHVTSSYYSACMGYSFALAVVKGGISRK 974
Query: 379 GTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
G V + + DG + +Y P
Sbjct: 975 GESVYLPLS----DGTTVEAEICSPVFYDP 1000
>TIGR_CMR|CPS_4034 [details] [associations]
symbol:CPS_4034 "sarcosine oxidase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008115
"sarcosine oxidase activity" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
InterPro:IPR023753 Pfam:PF01571 Pfam:PF07992 PIRSF:PIRSF037980
PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 RefSeq:YP_269196.1 RefSeq:YP_270692.1
ProteinModelPortal:Q47WX9 STRING:Q47WX9 GeneID:3521446
GeneID:3522790 KEGG:cps:CPS_2480 KEGG:cps:CPS_4034 PATRIC:21468029
HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336
BioCyc:CPSY167879:GI48-2543-MONOMER
BioCyc:CPSY167879:GI48-4047-MONOMER PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 Uniprot:Q47WX9
Length = 1007
Score = 264 (98.0 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 94/390 (24%), Positives = 162/390 (41%)
Query: 40 TALHDFHVANGGKMVPFAGWSMPIQYKD--SIMESTLN--C---RQNGSLFDVSHMCGLS 92
+A+H +H+ NG + W P + M+ +L C R + + D S + +
Sbjct: 620 SAMHKWHLENGAEFEDVGQWKRPWYFPQPGETMQQSLERECLATRNSVGILDASTLGKID 679
Query: 93 LKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGC 152
++GKD FL ++ + L G V E+G DD V + D+ + G
Sbjct: 680 IQGKDAREFLNRVYTNPWSKLGVGKCRYGVMCKEDGMVFDDGVTVCLDDNRFIMTTTTGG 739
Query: 153 RDKDLAHIEA-HMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFG- 210
L +E H + S + D S + + GP + VL+ + D+S F
Sbjct: 740 AAGVLQWLELWHQTEWPELEVYFST-VTDHWSTMTISGPNSRKVLEKICDIDVSNDSFKY 798
Query: 211 -EFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDS 269
++R + GV + R +TGE FEI+V + + KA++ E + +T G
Sbjct: 799 MDWRAATVAGVKARIFRISFTGELSFEINVQANYGMHAWKAVMAAGE-EFNITPYGTETM 857
Query: 270 --LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRR- 326
LR E G + G D + VTP + + W +GK++ + F+G ++ + D R+
Sbjct: 858 HILRAEKGFIIVGQDTDGSVTPQDLDMDWVVGKKK--DFSFIG-KRSWTRFDNKRDDRKQ 914
Query: 327 -VGFFAGGP----PARSHSKVHDEQGNP---IGEITSGGFSPCLKKNIAMGYVKSGLHKA 378
VG P P + Q P +G +TS +S C+ + A+ VK G+ +
Sbjct: 915 MVGLKPKDPTFVLPEGAQIVFEKNQSIPMKMVGHVTSSYYSACMGYSFALAVVKGGISRK 974
Query: 379 GTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
G V + + DG + +Y P
Sbjct: 975 GESVYLPLS----DGTTVEAEICSPVFYDP 1000
>UNIPROTKB|F1MDJ6 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:DAAA02027819 IPI:IPI00715285 Ensembl:ENSBTAT00000036611
Uniprot:F1MDJ6
Length = 866
Score = 263 (97.6 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 97/339 (28%), Positives = 155/339 (45%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q + D+S ++KG+D + L+ L A + P G + G +
Sbjct: 527 QRVGVIDLSPFGKFNIKGQDSIRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 582
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ LV +G DL IE KGG DV +I DE +L + GP +
Sbjct: 583 VSHQSPGEFLLVTGSGSELHDLRWIEEE----AIKGGYDVEIKNITDELGVLGVAGPYSR 638
Query: 194 PVLQHLTKDDLSKLYFG--EFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E + L AI
Sbjct: 639 KVLQKLTSEDLSDNVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSAALYDAI 698
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+ + EG + G A ++LRLE +G++M P+EAGL + + A+ F+
Sbjct: 699 MNAGQEEG-IDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLESFVKLNKPAD--FI 755
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ RR+ P + S +D G +G TSG +S ++K+
Sbjct: 756 G-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYD--GKVVGNTTSGSYSYRIQKS 812
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+ YV L K G +V++E+ GK Y + + P V T+
Sbjct: 813 LVFAYVPVELSKVGQQVEVELLGKNYPAVVIQEPLVLTE 851
>UNIPROTKB|F1PK75 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 EMBL:AAEX03002116
EMBL:AAEX03002117 EMBL:AAEX03002118 Ensembl:ENSCAFT00000014573
Uniprot:F1PK75
Length = 794
Score = 262 (97.3 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 97/339 (28%), Positives = 156/339 (46%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q + D+S ++KG+D V L+ L A + P G + G +
Sbjct: 455 QKVGVIDLSPFGKFNIKGQDSVRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 510
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE GG DV +I DE +L + GP A
Sbjct: 511 VSHQTPGEFLLITGSGSELHDLRWIEEE----AVNGGYDVEIKNITDELGVLGIAGPHAR 566
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E + L +
Sbjct: 567 KVLQKLTAEDLSDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDIV 626
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
++ + EG + G A ++LRLE +G++M P+EAGL + I + A+ F+
Sbjct: 627 MDAGQEEG-IDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPAD--FI 683
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ RR+ P + S D G +G TSG +S ++K+
Sbjct: 684 G-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWFD--GKVVGNTTSGTYSYSIQKS 740
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+A YV L K G +V++E+ G+ Y +I + P V T+
Sbjct: 741 LAFAYVPIELSKVGQQVEVELLGRNYPASIIQEPLVLTE 779
>UNIPROTKB|F1PKA8 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 OMA:REVGKMI GeneTree:ENSGT00530000063120
EMBL:AAEX03002116 EMBL:AAEX03002117 EMBL:AAEX03002118
Ensembl:ENSCAFT00000014548 Uniprot:F1PKA8
Length = 838
Score = 262 (97.3 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 97/339 (28%), Positives = 156/339 (46%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q + D+S ++KG+D V L+ L A + P G + G +
Sbjct: 500 QKVGVIDLSPFGKFNIKGQDSVRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 555
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE GG DV +I DE +L + GP A
Sbjct: 556 VSHQTPGEFLLITGSGSELHDLRWIEEE----AVNGGYDVEIKNITDELGVLGIAGPHAR 611
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E + L +
Sbjct: 612 KVLQKLTAEDLSDDVFKFLQTKSLKVSDIPVTAIRISYTGELGWELYHRREDSAALYDIV 671
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
++ + EG + G A ++LRLE +G++M P+EAGL + I + A+ F+
Sbjct: 672 MDAGQEEG-IDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPAD--FI 728
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ RR+ P + S D G +G TSG +S ++K+
Sbjct: 729 G-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWFD--GKVVGNTTSGTYSYSIQKS 785
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+A YV L K G +V++E+ G+ Y +I + P V T+
Sbjct: 786 LAFAYVPIELSKVGQQVEVELLGRNYPASIIQEPLVLTE 824
>RGD|620453 [details] [associations]
symbol:Dmgdh "dimethylglycine dehydrogenase" species:10116
"Rattus norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005542 "folic acid binding" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO;IDA;TAS] [GO:0006544
"glycine metabolic process" evidence=ISO] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0006579 "amino-acid betaine
catabolic process" evidence=IEA] [GO:0019695 "choline metabolic
process" evidence=TAS] [GO:0042426 "choline catabolic process"
evidence=TAS] [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA;ISO;IDA;TAS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA;TAS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291 RGD:620453
GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 261 (96.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 98/339 (28%), Positives = 155/339 (45%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q + D+S ++KG+D L+ L A + P G + G +
Sbjct: 520 QRVGVIDLSPFGKFNIKGQDSTQLLDHLC----ANVIPKVGFTNISHMLTPRGRVYAELT 575
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE +GG DV +I DE +L + GP A
Sbjct: 576 VSHQSPGEFLLITGSGSELHDLRWIE----EAAVRGGYDVEIRNITDELGVLGVAGPYAR 631
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L I+ + R YTGE G+E+ E + L + I
Sbjct: 632 RVLQKLTSEDLSDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERI 691
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+ + EG + G A ++LRLE +G++M P+EAGL + I + A+ F
Sbjct: 692 MNAGQEEG-IDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPAD--FT 748
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ RR+ P + S + +G IG TSG +S ++K+
Sbjct: 749 G-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESVWY--KGKVIGNTTSGSYSYSIQKS 805
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+A YV L + G +V++E+ GK Y I + P V T+
Sbjct: 806 LAFAYVPVELSEVGQQVEVELLGKNYPATIIQEPLVLTE 844
>UNIPROTKB|Q63342 [details] [associations]
symbol:Dmgdh "Dimethylglycine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 UniPathway:UPA00291
RGD:620453 GO:GO:0005739 GO:GO:0050660 GO:GO:0042426 GO:GO:0006579
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0005542 eggNOG:COG0665 HOGENOM:HOG000251716
HOVERGEN:HBG081945 OrthoDB:EOG466VK7 GO:GO:0047865 EMBL:X55995
IPI:IPI00207941 PIR:S16133 UniGene:Rn.3646
ProteinModelPortal:Q63342 STRING:Q63342 PhosphoSite:Q63342
PRIDE:Q63342 UCSC:RGD:620453 InParanoid:Q63342
BioCyc:MetaCyc:MONOMER-16117 BRENDA:1.5.99.2 ArrayExpress:Q63342
Genevestigator:Q63342 GermOnline:ENSRNOG00000023588 Uniprot:Q63342
Length = 857
Score = 261 (96.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 98/339 (28%), Positives = 155/339 (45%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q + D+S ++KG+D L+ L A + P G + G +
Sbjct: 520 QRVGVIDLSPFGKFNIKGQDSTQLLDHLC----ANVIPKVGFTNISHMLTPRGRVYAELT 575
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE +GG DV +I DE +L + GP A
Sbjct: 576 VSHQSPGEFLLITGSGSELHDLRWIE----EAAVRGGYDVEIRNITDELGVLGVAGPYAR 631
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L I+ + R YTGE G+E+ E + L + I
Sbjct: 632 RVLQKLTSEDLSDDVFKFLQTKSLKISDIPVTAIRISYTGELGWELYHRREDSAALYERI 691
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+ + EG + G A ++LRLE +G++M P+EAGL + I + A+ F
Sbjct: 692 MNAGQEEG-IDNFGTYALNALRLEKAFRAWGSEMNCDTNPLEAGLDYFIKLNKPAD--FT 748
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
G ++ LKQ+ RR+ P + S + +G IG TSG +S ++K+
Sbjct: 749 G-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESVWY--KGKVIGNTTSGSYSYSIQKS 805
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
+A YV L + G +V++E+ GK Y I + P V T+
Sbjct: 806 LAFAYVPVELSEVGQQVEVELLGKNYPATIIQEPLVLTE 844
>TIGR_CMR|SPO_1913 [details] [associations]
symbol:SPO_1913 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 RefSeq:YP_167148.1
ProteinModelPortal:Q5LS57 GeneID:3192947 KEGG:sil:SPO1913
PATRIC:23377155 HOGENOM:HOG000253737 KO:K00605 OMA:GGMLNDP
ProtClustDB:PRK12486 BioCyc:MetaCyc:MONOMER-14220
PANTHER:PTHR13847:SF5 Uniprot:Q5LS57
Length = 364
Score = 248 (92.4 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 85/324 (26%), Positives = 155/324 (47%)
Query: 67 DSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNE 126
DS+ + +++ ++DV+ +S++G D + ++ + D+ +A +
Sbjct: 40 DSLQADCAHLKEHVQVWDVACERQVSIQGPDALRLMKLISPRDMDRMADDQCYYVPTVDH 99
Query: 127 NGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLA 186
GG ++D V K+ DH +L + D DL ++ + A+G DV + + S LA
Sbjct: 100 RGGMLNDPVAVKLAADHYWLSL----ADGDL--LQFGLGIAIARGFDVEI-VEPDVSPLA 152
Query: 187 LQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVP-SERAV 245
+QGP A ++ + + + + F ++ L GV + R+G++ + GFEI V SE +
Sbjct: 153 VQGPRADDLMARVFGEAVRDIRFFRYKRLAFQGVELVVARSGWSKQGGFEIYVEGSELGM 212
Query: 246 DLAKAILEK-SEGKVRLTGLGARDSL-RLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRR 303
L A+ ++ VR G +++ R+E+GL YGNDM + TP E GL GK
Sbjct: 213 PLWNALFAAGADLNVRA---GCPNNIERVESGLLSYGNDMTRENTPYECGL----GKFCN 265
Query: 304 AEGGFLGAEKILKQLDEGPPVRRVGFFAGG--PPARSHSKVHDEQGNPIGEITSGGFSPC 361
+ ++G + +Q GP + GG PP + + + G +G++ S SP
Sbjct: 266 SPEDYIGKAALAEQAKNGPARQIRALVIGGEIPPCQDAWPLLAD-GRQVGQVGSAIHSPE 324
Query: 362 LKKNIAMGYVKSGLHKAGTKVKIE 385
N+A+G V GT +++E
Sbjct: 325 FGVNVAIGMVDRSHWAPGTGMEVE 348
>UNIPROTKB|F1NBJ7 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 OMA:PHHDVIK EMBL:AADN02026458
EMBL:AADN02026459 EMBL:AADN02026460 EMBL:AADN02026461
IPI:IPI00571388 ProteinModelPortal:F1NBJ7
Ensembl:ENSGALT00000004499 Uniprot:F1NBJ7
Length = 906
Score = 254 (94.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 93/342 (27%), Positives = 148/342 (43%)
Query: 69 IMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENG 128
I + L CR +LF++S+ L G + L ADV+ APG+ T N+ G
Sbjct: 545 IKKECLTCRNAVALFNMSYFGKFYLVGPEATKAANWLFSADVSK-APGSTVYTCMLNKRG 603
Query: 129 GSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 175
G D ++++ + D YL + + +HI A ++ + +
Sbjct: 604 GVESDLTVSRISPGDPSSPLAPAFQGDGYYLAIGGAVAQHNWSHITAVLQDMKLQCKLID 663
Query: 176 WHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGED 233
+E +++LQGPL+ VLQ L DLS F R++ G + R + GE
Sbjct: 664 --CSEELGMMSLQGPLSRTVLQELLDTDLSNEAFPFSTHRLVKAAGCTVRAMRLSFVGEL 721
Query: 234 GFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTPVE 291
G+E+ VP E V + +A++E + +T G R DSL +E G + D+ TP+E
Sbjct: 722 GWELHVPREDCVRVYQAVMEAG-ARHGITNAGYRAIDSLSIEKGYRHWHADLRPDDTPLE 780
Query: 292 AGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIG 351
AGL + + ++ FLG E + Q G R V F + G +G
Sbjct: 781 AGLAFTC--KLKSSIPFLGREAVEAQKSAGIFRRLVCFTTDEKVPMFGLEAIWRDGEVVG 838
Query: 352 EITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIE-VRGKAYD 392
I F + K IA GY++ AG V ++ VR Y+
Sbjct: 839 HIRRADFGFAIDKTIAYGYIRD---PAGGPVSLDFVRSGNYE 877
Score = 42 (19.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 4 GSLWQLGQSITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S A + + R ++ T LH V NGG +
Sbjct: 99 GLLWQLRPSDVEVELLAHTRDVVSRDLPAE------TGLHTGWVQNGGLFI 143
>UNIPROTKB|Q4K4P9 [details] [associations]
symbol:soxA "Sarcosine oxidase, alpha subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0008115 "sarcosine
oxidase activity" evidence=ISS] [GO:0009063 "cellular amino acid
catabolic process" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368 PRINTS:PR00469
GO:GO:0005737 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009063
eggNOG:COG0446 GO:GO:0046653 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115 HOGENOM:HOG000218134
KO:K00302 OMA:RECKAVR ProtClustDB:CLSK869336 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_262784.1 ProteinModelPortal:Q4K4P9
STRING:Q4K4P9 GeneID:3480098 KEGG:pfl:PFL_5726 PATRIC:19880953
BioCyc:PFLU220664:GIX8-5766-MONOMER Uniprot:Q4K4P9
Length = 1005
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 95/403 (23%), Positives = 167/403 (41%)
Query: 25 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQY----KDSIMESTLNC---R 77
+A RH E ++ TALH +HV NG + W P + +D C R
Sbjct: 603 VAGRHCGHIFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLHAAVKRECQAVR 662
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVIT 137
+ L D S + + ++G D FL ++ L G + E+G DD V
Sbjct: 663 DSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTA 722
Query: 138 KVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQ 197
+ D+H + G + L +E + ++ + D + + L GP + +L
Sbjct: 723 CLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKLLS 782
Query: 198 HLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKS 255
+T DL K F ++ + GV + R +TGE +E++V ++ A+ + + I+E
Sbjct: 783 EVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEQIVEAG 842
Query: 256 EGKVRLTGLGARDS--LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAE 312
+ K LT G LR E G + G D + +TP + + W +G+ + G+ G
Sbjct: 843 K-KYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGMN 901
Query: 313 KILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNP---IGEITSGGFSPCLKKN 365
+ + + VG P P + + +Q P +G +TS L +
Sbjct: 902 R--EDCVREQRKQLVGLKPIDPTQWLPEGAQLVFNPKQAIPMSMVGHVTSSYAHNSLGYS 959
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
A+G VK GL + G +V + DG + + V + ++ P
Sbjct: 960 FALGVVKGGLKRLGERVFAPLA----DGRVIEAEIVSSVFFDP 998
>UNIPROTKB|Q48CP0 [details] [associations]
symbol:soxA "Sarcosine oxidase, alpha subunit"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0008115 "sarcosine oxidase activity" evidence=ISS] [GO:0009063
"cellular amino acid catabolic process" evidence=ISS]
InterPro:IPR000103 InterPro:IPR006222 InterPro:IPR006277
InterPro:IPR013027 Pfam:PF01571 PIRSF:PIRSF037980 PRINTS:PR00368
PRINTS:PR00469 GO:GO:0005737 GO:GO:0009063 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0446 GO:GO:0046653
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GO:GO:0008115 HOGENOM:HOG000218134 KO:K00302 OMA:RECKAVR
ProtClustDB:CLSK869336 PANTHER:PTHR13847:SF41 TIGRFAMs:TIGR01372
RefSeq:YP_276853.1 ProteinModelPortal:Q48CP0 STRING:Q48CP0
GeneID:3558593 KEGG:psp:PSPPH_4753 PATRIC:19979003 Uniprot:Q48CP0
Length = 1006
Score = 249 (92.7 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 96/402 (23%), Positives = 165/402 (41%)
Query: 25 IARRHFASDAENLKKTALHDFHVANGGKMVPFAGWSMPIQY----KDSIMESTLNC---R 77
IA RH E ++ TALH +HV NG + W P + +D C R
Sbjct: 603 IAGRHCKHIFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLPAAVARECKAVR 662
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVIT 137
+ L D S + + ++G D FL ++ L G + E+G DD V
Sbjct: 663 DSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGVTA 722
Query: 138 KVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQ 197
+ D+H + G + L +E + ++ + D + L L GP + +L
Sbjct: 723 CLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATLTLSGPNSRKLLS 782
Query: 198 HLTKDDLSKLYFGEFRILD--INGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKS 255
+T DL + F + + GV + R +TGE +E+++ ++ A+ + + I E
Sbjct: 783 EVTDIDLGREAFPFMTWKEGLVAGVPARVFRISFTGELSYEVNIQADYAMGVLEKIAEAG 842
Query: 256 EGKVRLTGLGARDS--LRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAE 312
+ + LT G LR E G + G D + +TP + + W +G+ + G+ G
Sbjct: 843 K-QYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGMN 901
Query: 313 KI------LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNI 366
+ KQL PV + G +K + +G +TS L +
Sbjct: 902 REDCVREQRKQLVGLKPVDPTKWLPEGAQLVFDTKQTIPM-SMVGHVTSSYAHNSLGYSF 960
Query: 367 AMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
AMG VK GL + G +V + DG++ + V + ++ P
Sbjct: 961 AMGVVKGGLARMGERVFAPLA----DGSVIEAEIVSSVFFDP 998
>TIGR_CMR|SPO_A0311 [details] [associations]
symbol:SPO_A0311 "FAD dependent
oxidoreductase/aminomethyl transferase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000251716 RefSeq:YP_165138.1 ProteinModelPortal:Q5LKS0
GeneID:3196955 KEGG:sil:SPOA0311 PATRIC:23381968 OMA:KLRCSPL
ProtClustDB:CLSK863205 Uniprot:Q5LKS0
Length = 799
Score = 245 (91.3 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 92/368 (25%), Positives = 159/368 (43%)
Query: 34 AENLKKTALHDFHVANGGKMVPFAGWS-----------MPI-----QYKDSIMESTLNCR 77
A +++ +H+ VA G + GW +P+ +++D + CR
Sbjct: 421 ARGQRRSPVHEGLVAAGARFEARGGWERALHFGGDEAHLPLTFGIPKWRDQVAREVDACR 480
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVIT 137
++ D S + ++G D FL +L A + +A G T N GG D +
Sbjct: 481 NGAAILDQSAFGKIMVQGPDACTFLNRLCAAQM-DIAEGRIAYTQILNARGGVESDLTVQ 539
Query: 138 KVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQ 197
+ + ++V AG +D+ + F + DV+ + + L G A VLQ
Sbjct: 540 RHGPETYLMIVGAGEVVRDMKRMRETRGDFRVEFTDVT----SGYAAIGLAGTKAREVLQ 595
Query: 198 HLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEG 257
T + L F ++I + R +TGE+G+E+ VPS+ A+ +A++ + G
Sbjct: 596 ATTNTPVPDLKRFRFAPVEIGLARGWAGRLSFTGEEGYELYVPSDMAMAAHEALV--AAG 653
Query: 258 KVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQ 317
GL A SLR+E+G +G+++ TP EAGL G GF+G +
Sbjct: 654 ATH-AGLFASGSLRIESGFRAFGHELTPGTTPQEAGL----GAFCAFGTGFVGQGALA-- 706
Query: 318 LDEGPPVRRVGFFAGGPPARSHSKVHDE----QGNPIGEITSGGFSPCLKKNIAMGYVKS 373
+ G P RRV P + +HDE G +G+ITS +S +++A+ + +
Sbjct: 707 -NAGSPKRRVVSLLFDDP--NAMPIHDEPIYYDGRVVGQITSAAWSYRFGRSVALAMINA 763
Query: 374 GLHKAGTK 381
L T+
Sbjct: 764 PLDLIATQ 771
>TIGR_CMR|SPO_3396 [details] [associations]
symbol:SPO_3396 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716 OMA:DWFDIVG
KO:K00314 ProtClustDB:CLSK863205 RefSeq:YP_168592.1
ProteinModelPortal:Q5LN16 GeneID:3195707 KEGG:sil:SPO3396
PATRIC:23380247 Uniprot:Q5LN16
Length = 816
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 102/400 (25%), Positives = 172/400 (43%)
Query: 34 AENLKKTALHDFHVANGGKMVPFAGW------SMPIQ---YK---------DSIMESTLN 75
+ +++T H+ ANG AGW + P Q Y+ D++ E
Sbjct: 422 SRGVRRTPFHEHLKANGAVFGELAGWERANWYARPDQEREYRYSWRRQNFFDNVAEEHKA 481
Query: 76 CRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSV 135
R ++D+S + ++G D +L + + G T F N NGG D
Sbjct: 482 IRTGLGMYDMSSFGKIRVEGPDATAYLNHIAGGQF-DVPVGRIVYTQFLNVNGGIEADVT 540
Query: 136 ITKVKDDHIYLVVN-AGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAP 194
+T++ + YLVV A R D + + F DV+ +LA+ GP A
Sbjct: 541 VTRLSET-AYLVVTPAATRYADQTRMMRLVGDFRVVITDVT----AGEGVLAVMGPKARE 595
Query: 195 VLQHLTKDDLSKLY--FGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAIL 252
++ ++ +D S FG + +++ + R Y GE G+EI V S+ A + +
Sbjct: 596 LMARVSPNDFSNDVNPFGTAQEIELGMGLARVHRVTYVGELGWEIYVSSDMAGHAFETLF 655
Query: 253 EKSEGK-VRLTGLGARDSLRLEAGLCLYGNDM--EQHVTPVEAGLTWAIGKRRRAEGGFL 309
E + ++L G+ D R+E +G+D+ E HV +EAGL +A+ K + + F+
Sbjct: 656 EAGQDLGMKLCGMHVMDCCRIEKAFRHFGHDITPEDHV--LEAGLGFAV-KTDKPD--FI 710
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGP-PARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAM 368
G + +L++ DEG R V F P P H++ G +G ++SG + L I M
Sbjct: 711 GRDAVLRKKDEGLKTRMVQFRLTDPEPLLYHNEPLLRDGQIVGYLSSGAYGHHLGSAIGM 770
Query: 369 GYV----KSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
GYV +S + +I+V G + P K
Sbjct: 771 GYVPCEGESAADVLASTYEIDVMGTRVRAEASLAPMYDPK 810
>ASPGD|ASPL0000076695 [details] [associations]
symbol:AN8654 species:162425 "Emericella nidulans"
[GO:0004047 "aminomethyltransferase activity" evidence=RCA]
[GO:0006520 "cellular amino acid metabolic process" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 EMBL:BN001303
EMBL:AACD01000158 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 eggNOG:COG0665 HOGENOM:HOG000251716 RefSeq:XP_681923.1
ProteinModelPortal:Q5ASS6 SMR:Q5ASS6 STRING:Q5ASS6
EnsemblFungi:CADANIAT00006391 GeneID:2868571 KEGG:ani:AN8654.2
OMA:RRSPIHE OrthoDB:EOG4G4KZH Uniprot:Q5ASS6
Length = 948
Score = 238 (88.8 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 96/341 (28%), Positives = 146/341 (42%)
Query: 81 SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVK 140
+++D+S + G V L+ L DV + PGT + NENGG D +T++
Sbjct: 594 AMYDMSSFHRFIVSGPGAVALLQGLGTVDV-DVRPGTIVYALLLNENGGIYSDVFVTRLG 652
Query: 141 DDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSW-HIHDERS---LLALQGPLAAPVL 196
+ N DLA++ + T K W H+ D + L GP AA VL
Sbjct: 653 SFTYQIGANTAT---DLAYLARKARYQTQKS-PADWVHVEDVTGGTCAIGLWGPRAADVL 708
Query: 197 QHLT---KDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
L + D+S L + + + I + L R Y GE G+EI +E L +AI
Sbjct: 709 HSLPLPRETDISNKSLPYMRAKAVTIASIPVTLFRKSYVGEYGWEIQTSAEHGARLWEAI 768
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI------GKRRR 303
K G + G A ++LR+E G YG DM P EAGL AI G ++
Sbjct: 769 FNAGKRHGLIA-AGRAAFNALRIEKGYRTYGVDMTTEHDPYEAGLGSAIANLKLEGTSKK 827
Query: 304 AEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSP 360
AE F+G + L+ + RR+ G V+ GN +G +T+ F
Sbjct: 828 AE--FVG-KAALRARGKKALTRRLTCLTVDDGMSMVMGKEPVY-LSGNAVGYVTNAAFGY 883
Query: 361 CLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 401
++K + +V +GL++ G V+I GK + P V
Sbjct: 884 TIRKPVVYAWVPAGLNE-GVGVEIGYFGKKIKATVVGEPVV 923
>TIGR_CMR|SPO_0207 [details] [associations]
symbol:SPO_0207 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165477.1
ProteinModelPortal:Q5LWZ7 GeneID:3195798 KEGG:sil:SPO0207
PATRIC:23373663 OMA:WHAAANI Uniprot:Q5LWZ7
Length = 805
Score = 236 (88.1 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 91/338 (26%), Positives = 142/338 (42%)
Query: 77 RQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
R+ + D+S+ +KG +L++LV A+ G LT GG D I
Sbjct: 475 REQVGVIDISNFANYEIKGPGAHDWLDRLV-ANRVPTVEGRSCLTPLIGVRGGIAGDFTI 533
Query: 137 TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVL 196
T +D Y++V +G ++ H + G + + + GP A +L
Sbjct: 534 TMTGED-AYMMVGSGMAER--YH-QRFFNMVDLPEGTTCEVATNRIAGYNVAGPRAREML 589
Query: 197 QHLTKDDLSKLYFGEFR--ILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAIL-- 252
Q LT DLS F R +++ GV+C R +TG+ G E+ V L A++
Sbjct: 590 QRLTNADLSNAGFPFMRSATIEVAGVACLAIRVSFTGDLGCELHCAEGDQVRLYTALIAA 649
Query: 253 --EKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLG 310
E G V LG SLR+E G +G + P E GL I +A+ FL
Sbjct: 650 AREVGGGPVGSRALG---SLRIEKGYGSWGREYSPEYWPQEVGLDRLI----KADKDFLN 702
Query: 311 AEKILKQLDEGPPVRRV-GFF----AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKN 365
LK D PVR V F G A + G P G +TSG + + K+
Sbjct: 703 KAAWLKIKDY--PVREVLSVFEIEAVHGADASGGEPIFTPDGRPAGRVTSGAYGYSVGKS 760
Query: 366 IAMGYVKSGLHKAGTKVKIEVRGKAYDGNI-TKMPFVP 402
+A+G+V + + G +++ + GK + + + PF P
Sbjct: 761 LAIGFVNPAVAQPGDVLEVFILGKPHRAVLLAEPPFDP 798
>ZFIN|ZDB-GENE-040426-996 [details] [associations]
symbol:sardh "sarcosine dehydrogenase" species:7955
"Danio rerio" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
ZFIN:ZDB-GENE-040426-996 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 EMBL:AL935290 EMBL:BX323065
EMBL:BX537125 EMBL:CU524648 IPI:IPI00481475
Ensembl:ENSDART00000080904 Ensembl:ENSDART00000131043
Uniprot:F1Q4Q8
Length = 924
Score = 236 (88.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 81/326 (24%), Positives = 139/326 (42%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
+ D I + L CR ++FD+S+ L G D + L ADV APG+ T
Sbjct: 550 HHDVIRDECLTCRNAVAVFDMSYFGKFYLSGPDAKKAADWLFTADV-NKAPGSTVYTCML 608
Query: 125 NENGGSIDDSVITKVKDD--HI-----------YLVVNAGCRDKDLAHIEAHMKSFTAKG 171
N+ GG D +++++ H+ YL + G + +HI++ ++ +
Sbjct: 609 NQRGGVESDLTVSRLEPSPSHLPLTPEFNGDAYYLAIGGGVAQHNWSHIQSVLQDQGFRC 668
Query: 172 GDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGY 229
+ H D ++++QGP + +LQ + +LS F RI+ G R +
Sbjct: 669 TLID-HTED-MGMISIQGPKSRELLQEVLDSELSNEAFPFSTHRIVSAAGHQVRAMRLSF 726
Query: 230 TGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHV 287
GE G+E+ +P E + + A++ K + G R DSL +E G + D+
Sbjct: 727 VGEMGWELHIPKESCLPVYNAVMAAG-AKYGICNAGYRAIDSLSIEKGYRHWHADLRPDD 785
Query: 288 TPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQG 347
TP+EAGL + + + F+G + Q EG R V F + G
Sbjct: 786 TPLEAGLAFTC--KLKTSIPFMGRTALEAQKAEGLRRRIVCFTVDEKVPMFGLEAIFRNG 843
Query: 348 NPIGEITSGGFSPCLKKNIAMGYVKS 373
P+G + F + K I GY+++
Sbjct: 844 VPVGHLRRSEFGFAIDKTIGYGYIRN 869
>UNIPROTKB|E1BB28 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:DAAA02032349 EMBL:DAAA02032350 IPI:IPI00707303
RefSeq:NP_001179970.1 UniGene:Bt.45831 ProteinModelPortal:E1BB28
Ensembl:ENSBTAT00000005925 GeneID:614603 KEGG:bta:614603
NextBio:20899187 Uniprot:E1BB28
Length = 919
Score = 235 (87.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 87/333 (26%), Positives = 144/333 (43%)
Query: 59 WSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTG 118
+S P + D I + L CR ++FD+S+ L G D + L ADV+ PG+
Sbjct: 549 FSFP-PHHDVIKKECLACRGAAAVFDMSYFGKFFLVGPDARKAADWLFSADVSR-PPGST 606
Query: 119 TLTVFTNENGGSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHM- 164
T N GG+ D ++++ + D YL V + +HI +
Sbjct: 607 VYTCMLNHRGGTESDLTVSRLAPGPQASPLAPAFEGDGYYLAVGGAAAQHNWSHIRTVLQ 666
Query: 165 -KSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVS 221
+ F + D S ++ L+++QGP + VLQ L + DLS F +++ G
Sbjct: 667 DRKFRCQLIDSS----EDLGLISVQGPASRAVLQELLEADLSDDAFPFSTHKLVRAAGHL 722
Query: 222 CFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLY 279
R + GE G+E+ P + + +A++ K L G R DSL +E G +
Sbjct: 723 VRAVRLSFVGELGWELHAPRPSCLPVYQALMTAG-AKHGLVNAGYRAIDSLSIEKGYRHW 781
Query: 280 GNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSH 339
D+ +P+EAGL + + ++ FLG E + KQ EG R VGF +
Sbjct: 782 HADLRADDSPLEAGLAFTC--KLKSSVPFLGREALEKQRAEGLRRRLVGFTVDEKVSMFG 839
Query: 340 SKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVK 372
+ G +G + F + K +A GY++
Sbjct: 840 LEAIWRNGQVVGHVRRADFGFTINKTLAYGYIR 872
Score = 42 (19.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++R E ++T LH + NGG +
Sbjct: 112 GLLWQLRPSDVEVELLAHTRQVVSR-------ELEEETGLHTGWIQNGGLFI 156
>TIGR_CMR|SPO_1586 [details] [associations]
symbol:SPO_1586 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR006222
InterPro:IPR006277 InterPro:IPR013027 Pfam:PF01571
PIRSF:PIRSF037980 PRINTS:PR00368 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046653 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115 HOGENOM:HOG000218134
KO:K00302 PANTHER:PTHR13847:SF41 TIGRFAMs:TIGR01372
RefSeq:YP_166827.1 ProteinModelPortal:Q5LT28 GeneID:3192653
KEGG:sil:SPO1586 PATRIC:23376495 OMA:ARREPNT
ProtClustDB:CLSK2463878 Uniprot:Q5LT28
Length = 983
Score = 222 (83.2 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 89/356 (25%), Positives = 159/356 (44%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
++ S+ R++ + DV+ + + ++G D FL K+ A LA G +
Sbjct: 627 WRQSVDREVTQTRKSVGICDVTTLGKIDVQGADAAEFLNKVYCNAFAKLAVGRTRYGLML 686
Query: 125 NENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER-S 183
E+G ++DD ++ +DH + H+E ++ DV E +
Sbjct: 687 REDGIAMDDGTAARLAEDHFVVTTTTANAVPVYRHME-FVRQCLFPDMDVQLISTTEAWA 745
Query: 184 LLALQGPLAAPVLQHLTKD--DLSKLYFGEFRILDIN---GVSCFLTRTGYTGEDGFEIS 238
A+ GP A +LQ + DLS F +I G+ L R ++GE +EI+
Sbjct: 746 QFAVAGPNARKLLQKIVDPAHDLSNEGFPFMACAEITVCGGLRARLFRISFSGELAYEIA 805
Query: 239 VPSERAVDLAKAILEK-SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWA 297
VP+ L + +++ +E V G A +R+E G GN++ T + G+
Sbjct: 806 VPTRYGDALIRRMMQAGAEFDVVAYGTEALGVMRIEKGHAA-GNELNGTTTALNLGMGRM 864
Query: 298 IGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPI--- 350
+ K++ A G L +E+ + L+E ++ VGF P PA SH +G+P+
Sbjct: 865 VSKKKDAIGSTL-SER--EGLNEADALKLVGFRPVNPQDKVPAGSHLMT---RGDPVDAA 918
Query: 351 ---GEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKI--EVRGKAYDGNITKMPFV 401
G +TS +SP L +I +G++KSG + G V++ + G ++ + FV
Sbjct: 919 HDQGYVTSACYSPSLGCHIGIGFLKSGDSRKGEIVRLVSPLTGLDHEVEVVSAHFV 974
>UNIPROTKB|E2R5G7 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:AAEX03006776 RefSeq:XP_548398.2
Ensembl:ENSCAFT00000031482 GeneID:491277 KEGG:cfa:491277
Uniprot:E2R5G7
Length = 914
Score = 217 (81.4 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 85/327 (25%), Positives = 139/327 (42%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
+ D I + L CR ++F++S+ L G D + L ADV+ PG+ T
Sbjct: 549 HHDVIKKECLACRGAAAVFNMSYFGKFYLVGLDARKAADWLFSADVSR-PPGSTVYTCML 607
Query: 125 NENGGSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHMKS--FTA 169
N GG+ D ++++ + D YL V + +HI ++ F
Sbjct: 608 NHRGGTESDLTVSRLDPSPQASALAPAFEGDGYYLAVGGAVAQHNWSHISTVLQDQKFRC 667
Query: 170 KGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRT 227
+ D S ++ ++++QGP + +LQ + DLS F +++ G R
Sbjct: 668 QLIDGS----EDLGMISIQGPASRTILQEVLDADLSNEAFPFSTHKLVRAAGHLVRAMRL 723
Query: 228 GYTGEDGFEISVPSERAVDLAKAILEKS--EGKVRLTGLGARDSLRLEAGLCLYGNDMEQ 285
+ GE G+E+ VP V + +A++ G V G A DSL +E G + D+
Sbjct: 724 SFVGELGWELHVPRSACVPVYQAVMTAGTKHGLVN-AGYRAIDSLSIEKGYRHWHADLRP 782
Query: 286 HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDE 345
+P+EAGL + K + A FLG E + KQ G P R V F +
Sbjct: 783 DDSPLEAGLAFTC-KLKSAVP-FLGREALEKQRAHGLPRRLVCFTVDEKVPMFGLEAIWR 840
Query: 346 QGNPIGEITSGGFSPCLKKNIAMGYVK 372
G +G I F + K +A GY++
Sbjct: 841 NGQVVGHIRRADFGFFIDKTLAYGYIR 867
Score = 47 (21.6 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++R D E ++T LH + NGG +
Sbjct: 107 GLLWQLRPSDVEVELLAHTRRVVSR-----DLE--EETGLHTGWIQNGGLFI 151
Score = 37 (18.1 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 36 NLKKTALHDFHVANGGKMVPFAGWSMP 62
N++ LH+ +A G GW P
Sbjct: 478 NMRTDPLHEELLARGCVFQERQGWERP 504
>UNIPROTKB|F1RF50 [details] [associations]
symbol:DMGDH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047865 "dimethylglycine dehydrogenase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
OMA:REVGKMI GO:GO:0047865 GeneTree:ENSGT00530000063120
EMBL:CU468550 Ensembl:ENSSSCT00000015413 ArrayExpress:F1RF50
Uniprot:F1RF50
Length = 866
Score = 223 (83.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 71/233 (30%), Positives = 114/233 (48%)
Query: 180 DERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEI 237
D +L + GP A VLQ LT +DLS F + + + + R YTGE G+E+
Sbjct: 625 DVLGVLGVAGPHARKVLQKLTSEDLSDGAFKFLQTKAFKVANIPVTAIRISYTGELGWEL 684
Query: 238 SVPSERAVDLAKAILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLT 295
E + L I+ + EG + G A ++LRLE +G++M P+EAGL
Sbjct: 685 YHRREDSAALYDIIMNAGQEEG-IDNFGTYAMNALRLEKAFRAWGSEMNCDTNPLEAGLE 743
Query: 296 WAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGP----PARSHSKVHDEQGNPIG 351
+ + + A+ F+G ++ LKQ+ RR+ P + S +D G +G
Sbjct: 744 YFVKLNKPAD--FIG-KQALKQIKAKGLKRRLVCLTLATDDVDPEGNESIWYD--GKVVG 798
Query: 352 EITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 404
TSG +S ++K++A YV L K G +V++E+ GK Y + + P V T+
Sbjct: 799 NTTSGSYSYSIQKSLAFAYVPVELSKVGQQVEVELLGKNYPATVIQEPLVLTE 851
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKL 105
Q + D+S ++KG+D V L+ L
Sbjct: 527 QKVGVIDLSPFGKFTVKGQDSVRLLDHL 554
>TIGR_CMR|SPO_1592 [details] [associations]
symbol:SPO_1592 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_166833.1 ProteinModelPortal:Q5LT22
GeneID:3193241 KEGG:sil:SPO1592 PATRIC:23376507 OMA:AVWIDEC
Uniprot:Q5LT22
Length = 818
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 89/351 (25%), Positives = 141/351 (40%)
Query: 67 DSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNE 126
D + R + D+S + + G D L++L A+ PG LT N
Sbjct: 474 DMVATECAAVRSAAGIMDISAFTKVEVSGPDAGALLDRLT-ANRLPQKPGGIALTHMLNR 532
Query: 127 NGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKS--FTAKGGDVSWHIHDERSL 184
G ++ + K+ +D YLV A + L H+ AH + T + W +
Sbjct: 533 RGRIELETTVVKLDEDRFYLVCAAFFEQRLLDHLAAHRGTADITVRNLSTDW------AA 586
Query: 185 LALQGPLAAPVLQHLTKDDLSKLYFGEFRILDIN--GVSCFLTRTGYTGEDGFEISVPSE 242
LAL GP A +L T+ DLS F I G S + R Y GE G+E+ +P +
Sbjct: 587 LALNGPHARDILAACTEADLSNARFKWLTAQQITVAGHSLWALRMSYAGELGWELHIPRD 646
Query: 243 RAVDLAKAILEKSEGKVRLTGLG--ARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGK 300
A+ + A+ + + LT G A ++LR+E G ++ VT EA + +
Sbjct: 647 HALAVYDALWAAGQ-RYGLTDYGSFAMNALRMEKAFKGAG-ELTNEVTLAEADVL----R 700
Query: 301 RRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDE---QGNPIGEITSGG 357
R + +LG +K L P V + P R + G +G S
Sbjct: 701 FARTDKDYLGRDKTLNA-GNLPWV--CAYLEIAPDGRFDGNGGEAVLLDGKVVGSTASVA 757
Query: 358 FSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 408
+ + K +A YVK ++ GT+V++ + G G I P KP
Sbjct: 758 YGHTVGKILAFAYVKPQVNVPGTEVEVIIAGNPRKGRILGAPAYDPDSTKP 808
>UNIPROTKB|F1S0R9 [details] [associations]
symbol:SARDH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005739
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 CTD:1757 KO:K00314
OMA:PHHDVIK EMBL:CU572088 RefSeq:NP_001240851.1 UniGene:Ssc.32260
Ensembl:ENSSSCT00000006311 GeneID:100154338 KEGG:ssc:100154338
Uniprot:F1S0R9
Length = 918
Score = 212 (79.7 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 81/327 (24%), Positives = 137/327 (41%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
+ D I + L CR ++FD+S+ L G D + L ADV+ PG+ T
Sbjct: 553 HHDVIKKECLACRGAAAVFDMSYFGKFYLVGPDARKAADWLFSADVSR-PPGSTVYTCML 611
Query: 125 NENGGSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHM--KSFTA 169
N GG+ D ++++ + D YL V + H+ + + F
Sbjct: 612 NHRGGTESDLTVSRLAPSPQASPLTPAFEGDGYYLAVGGAVAQHNWCHLTTVLQDRQFRC 671
Query: 170 KGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRT 227
+ D S ++ L+++QGP + +LQ + DLS F +++ G R
Sbjct: 672 QLVDRS----EDLGLISIQGPASRAILQEVLDADLSNEAFPFSTHKLVRAAGHLVRAIRL 727
Query: 228 GYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQ 285
+ GE G+E+ +P + + +A++ K L G R DSL E G + D+
Sbjct: 728 SFVGELGWELHIPRPSCLPVYRAVMTAG-AKHGLVNAGYRAVDSLSTEKGYRHWHADLRP 786
Query: 286 HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDE 345
+P+EAGL + + ++ FLG E + KQ EG R V F +
Sbjct: 787 DDSPLEAGLAFTC--KLKSAVPFLGREALEKQQAEGLRRRLVCFTVDEKVPLFGLEAIWR 844
Query: 346 QGNPIGEITSGGFSPCLKKNIAMGYVK 372
G +G + F + K +A GY++
Sbjct: 845 SGQVVGHVRRADFGFAIDKTLAYGYIR 871
Score = 47 (21.6 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++R D E ++T LH + NGG +
Sbjct: 111 GLLWQLRPSDVEVELLAHTRRVVSR-----DLE--EETGLHTGWIQNGGLFI 155
Score = 39 (18.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 36 NLKKTALHDFHVANGGKMVPFAGWSMP 62
N+++ LH+ +A G GW P
Sbjct: 482 NMRRDPLHEELLARGCVFQERHGWERP 508
>UNIPROTKB|B4DPI2 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0050660
GO:GO:0005759 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:AL365494 EMBL:AL590710
UniGene:Hs.198003 HGNC:HGNC:10536 HOVERGEN:HBG002326 EMBL:AK298348
EMBL:AK316494 IPI:IPI01011174 SMR:B4DPI2 STRING:B4DPI2
Ensembl:ENST00000422262 Uniprot:B4DPI2
Length = 750
Score = 210 (79.0 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 78/324 (24%), Positives = 136/324 (41%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
+ D+I + L CR ++FD+S+ L G D + L ADV+ PG+ T
Sbjct: 385 HHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADVSR-PPGSTVYTCML 443
Query: 125 NENGGSIDDSVITKVKDDH-------------IYLVVNAGCRDKDLAHIEAHMKSFTAKG 171
N GG+ D ++++ H YL + + +HI ++ ++
Sbjct: 444 NHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHITTVLQDQKSQC 503
Query: 172 GDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGY 229
+ ++ ++++QGP + +LQ + DLS F ++L G R +
Sbjct: 504 QLID--SSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHLVRAMRLSF 561
Query: 230 TGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHV 287
GE G+E+ +P V + +A++ K L G R DSL +E G + D+
Sbjct: 562 VGELGWELHIPKASCVPVYRAVMAAG-AKHGLINAGYRAIDSLSIEKGYRHWHADLRPDD 620
Query: 288 TPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQG 347
+P+EAGL + + ++ FLG E + +Q G R V F + G
Sbjct: 621 SPLEAGLAFTC--KLKSPVPFLGREALEQQRAAGLRRRLVCFTMEDKVPMFGLEAIWRNG 678
Query: 348 NPIGEITSGGFSPCLKKNIAMGYV 371
+G + F + K IA GY+
Sbjct: 679 QVVGHVRRADFGFAIDKTIAYGYI 702
>UNIPROTKB|Q9UL12 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0008480 "sarcosine dehydrogenase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005739 GO:GO:0050660 GO:GO:0005759 EMBL:CH471090
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 EMBL:AL365494 HOGENOM:HOG000251716 EMBL:AF095735
EMBL:AF162428 EMBL:AF140745 EMBL:AF140726 EMBL:AF140727
EMBL:AF140728 EMBL:AF140729 EMBL:AF140730 EMBL:AF140731
EMBL:AF140732 EMBL:AF140733 EMBL:AF140734 EMBL:AF140735
EMBL:AF140736 EMBL:AF140737 EMBL:AF140738 EMBL:AF140739
EMBL:AF140740 EMBL:AF140741 EMBL:AF140742 EMBL:AF140743
EMBL:AF140744 EMBL:AL590710 EMBL:BC136363 EMBL:BC136364
EMBL:BC144035 EMBL:AF129265 IPI:IPI00034308 RefSeq:NP_001128179.1
RefSeq:NP_009032.2 UniGene:Hs.198003 ProteinModelPortal:Q9UL12
SMR:Q9UL12 STRING:Q9UL12 PhosphoSite:Q9UL12 DMDM:52000845
PaxDb:Q9UL12 PRIDE:Q9UL12 Ensembl:ENST00000371872
Ensembl:ENST00000439388 GeneID:1757 KEGG:hsa:1757 UCSC:uc004ceo.3
CTD:1757 GeneCards:GC09M136528 H-InvDB:HIX0079029 HGNC:HGNC:10536
MIM:268900 MIM:604455 neXtProt:NX_Q9UL12 Orphanet:3129
PharmGKB:PA34944 HOVERGEN:HBG002326 InParanoid:Q9UL12 KO:K00314
OMA:PHHDVIK OrthoDB:EOG4XKV66 PhylomeDB:Q9UL12 GenomeRNAi:1757
NextBio:7153 ArrayExpress:Q9UL12 Bgee:Q9UL12 CleanEx:HS_SARDH
Genevestigator:Q9UL12 GermOnline:ENSG00000123453 GO:GO:0008480
Uniprot:Q9UL12
Length = 918
Score = 210 (79.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 78/324 (24%), Positives = 136/324 (41%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
+ D+I + L CR ++FD+S+ L G D + L ADV+ PG+ T
Sbjct: 553 HHDTIKKECLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADVSR-PPGSTVYTCML 611
Query: 125 NENGGSIDDSVITKVKDDH-------------IYLVVNAGCRDKDLAHIEAHMKSFTAKG 171
N GG+ D ++++ H YL + + +HI ++ ++
Sbjct: 612 NHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSHITTVLQDQKSQC 671
Query: 172 GDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGY 229
+ ++ ++++QGP + +LQ + DLS F ++L G R +
Sbjct: 672 QLID--SSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAAGHLVRAMRLSF 729
Query: 230 TGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHV 287
GE G+E+ +P V + +A++ K L G R DSL +E G + D+
Sbjct: 730 VGELGWELHIPKASCVPVYRAVMAAG-AKHGLINAGYRAIDSLSIEKGYRHWHADLRPDD 788
Query: 288 TPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQG 347
+P+EAGL + + ++ FLG E + +Q G R V F + G
Sbjct: 789 SPLEAGLAFTC--KLKSPVPFLGREALEQQRAAGLRRRLVCFTMEDKVPMFGLEAIWRNG 846
Query: 348 NPIGEITSGGFSPCLKKNIAMGYV 371
+G + F + K IA GY+
Sbjct: 847 QVVGHVRRADFGFAIDKTIAYGYI 870
Score = 43 (20.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++R E ++T LH + NGG +
Sbjct: 111 GLLWQLRPSDVEVELLAHTRRVVSR-------ELEEETGLHTGWIQNGGLFI 155
>FB|FBgn0029706 [details] [associations]
symbol:CG3626 species:7227 "Drosophila melanogaster"
[GO:0019909 "[pyruvate dehydrogenase (lipoamide)] phosphatase
regulator activity" evidence=ISS] [GO:0019910 "mitochondrial
pyruvate dehydrogenase (lipoamide) phosphatase complex"
evidence=ISS] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 eggNOG:COG0665 EMBL:AY128477 ProteinModelPortal:Q8MQN6
SMR:Q8MQN6 STRING:Q8MQN6 PaxDb:Q8MQN6 PRIDE:Q8MQN6
FlyBase:FBgn0029706 InParanoid:Q8MQN6 OrthoDB:EOG45DV49
ArrayExpress:Q8MQN6 Bgee:Q8MQN6 Uniprot:Q8MQN6
Length = 939
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 82/365 (22%), Positives = 159/365 (43%)
Query: 67 DSIMESTLNCRQNGSLFDVSHMCGLSL--KGKDCVPFLEKLVIADVAGLAPGTGTLTVFT 124
D + CR+ + D S KG + V L+ L DV +A G+ T
Sbjct: 541 DHVASEYRACRERIGIADYSPFTKYDFWSKGNEVVDLLQYLCSNDV-DVAVGSIIHTGMQ 599
Query: 125 NENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSL 184
N NGG +D + ++ + H ++ + + + I HM + +V+ + +
Sbjct: 600 NPNGGYENDCSLARLSERHYMMIARTIQQTRSMCWIRKHMPNHLRAKVNVA-DVTSMYTA 658
Query: 185 LALQGPLAAPVLQHLTKDDLS-KLY-FGEFRILDI---NGVSCFLTRTGYTGEDGFEISV 239
+ + GP + +L LT DL+ K + F ++ LD+ +G+ L T +TGE G+ + +
Sbjct: 659 ICILGPYSRILLSELTDTDLTPKSFPFFTYKELDVGLADGIRV-LNIT-HTGELGYVLYI 716
Query: 240 PSERAVDLAKAILEKSEG-KVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
P+E A+ + + + + ++ G A +LR+E +G D++ TP+E G +W +
Sbjct: 717 PNEYALHVYSRLYQAGQKFNIQHAGYYATRALRIEKFYAFWGQDLDTFTTPLECGRSWRV 776
Query: 299 GKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPAR------SHSKVHDEQGNPIGE 352
+ + F+G +LKQ +EG V ++ + G +G
Sbjct: 777 KFNKPID--FIGRNALLKQREEGVKRMYVQLLLNDHDHEVDMWCWGGEPIYRD-GVYVGM 833
Query: 353 ITSGGFSPCLKKNIAMGYVKS----GLHKAGTK-------VKIEVRGKAYDGNIT-KMPF 400
T+ G+ +K + +G+V++ G T ++EV G ++ + P
Sbjct: 834 TTTTGYGYTFEKQVCLGFVRNFDDEGRELPVTNEYVLSGHYEVEVAGVRFEAKVNLHSPN 893
Query: 401 VPTKY 405
+PTK+
Sbjct: 894 LPTKF 898
>TIGR_CMR|SPO_1628 [details] [associations]
symbol:SPO_1628 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_166869.1
ProteinModelPortal:Q5LSY6 GeneID:3193115 KEGG:sil:SPO1628
PATRIC:23376579 OMA:MGLETEI Uniprot:Q5LSY6
Length = 802
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 74/295 (25%), Positives = 126/295 (42%)
Query: 110 VAGLAPGTG--TLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 167
+AG P TG +LT + G I D ++ + + L + G +D + E H +
Sbjct: 505 MAGRIPATGRLSLTPMLSAKGKLIGDFTVSCLGETEFQLTASYGSQDYHMRWFEQHQED- 563
Query: 168 TAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRT 227
G +I D+R+ + GP A VL T+DD+ L F + R + + C + R
Sbjct: 564 ----GITIENISDKRNGFQIAGPNARAVLAACTRDDVDNLRFMDVRRMVVGMTDCIVQRV 619
Query: 228 GYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQH 286
YTG+ G+EI S L + + + + G+ A SLRL+ + +
Sbjct: 620 SYTGDLGYEIYCDSMAQRQLWWTLWQAGQDHGMIPFGMRAMMSLRLDKFFGSWLREFSPD 679
Query: 287 VTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA--RSHSKVHD 344
T E GL I ++ A+ F+G + GP R F A ++ +
Sbjct: 680 YTAAETGLDRFISFKKNAD--FIGRAAAEAERAAGPARRLCAFEVDAEDADVNAYEPIWL 737
Query: 345 EQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMP 399
+ G + TSGG+S K++A+G++ G +V+IE+ G+ + P
Sbjct: 738 D-GAVVCFCTSGGYSHHAGKSVALGFLPVERIADGLEVEIEILGQMRRARVISQP 791
>TIGR_CMR|SPO_1648 [details] [associations]
symbol:SPO_1648 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000253737 KO:K00605
PANTHER:PTHR13847:SF5 RefSeq:YP_166889.1 ProteinModelPortal:Q5LSW6
GeneID:3193889 KEGG:sil:SPO1648 PATRIC:23376621 OMA:GKYVPLC
ProtClustDB:CLSK2767249 Uniprot:Q5LSW6
Length = 367
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 92/378 (24%), Positives = 164/378 (43%)
Query: 32 SDAENLKKTALHDFHVANGG-KMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCG 90
S + L+ + ++ +A+G M + MP Y E S++DV+
Sbjct: 5 SPSTRLRPSPFYEATLADGVCAMTTYNQMLMPTSYGHP-EEEYWRIINGVSMWDVAVERQ 63
Query: 91 LSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 150
+ L G D + L D++ G G N NG I+D ++ K+ +D +L +
Sbjct: 64 VQLMGPDAGRLAQILAPRDLSKCKIGQGKYVPLCNHNGVLINDPILLKLDEDRYWLSI-- 121
Query: 151 GCRDKDLAH-IEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYF 209
D ++ EA + K +VS + S LA+QGP A V+ + D + L +
Sbjct: 122 --ADSNIWFWAEAIARERGLKV-EVS---EPDVSPLAVQGPKAETVVASIFGDWVRDLKY 175
Query: 210 GEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGARDS 269
FR +I+G+ + R+G++ + GFEI + + A + K G+ + G G +
Sbjct: 176 FWFRETEIDGIPVAVARSGWSKQGGFEIYL-MDGTKGTALWNIVKEAGQPQGIGPGNPNW 234
Query: 270 L-RLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAE--GGFLGAEKILKQLDEGPPVRR 326
R+E+GL YG D + P E + GK + +G E + + EGP +
Sbjct: 235 CERVESGLVSYGGDSDGQTNPFEVRM----GKYVDLDLPDDTIGIEALRRIAAEGPKRHQ 290
Query: 327 VGFFA-GGPPARSHSKVHD--EQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVK 383
+G P ++ +D G IG++T+ +S + KNI V + + G +V
Sbjct: 291 LGVVLDNSEPVKAEFTWNDIDMDGMRIGDMTTCVWSYRMNKNIGFALVATSA-RPGDRVV 349
Query: 384 IEVRGKAYDGNITKMPFV 401
+ A +G + +PF+
Sbjct: 350 VRRAAGAVEGTLCDLPFL 367
>TIGR_CMR|SPO_2436 [details] [associations]
symbol:SPO_2436 "FAD dependent oxidoreductase/aminomethyl
transferase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=ISS] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_167653.1 ProteinModelPortal:Q5LQQ2
GeneID:3194123 KEGG:sil:SPO2436 PATRIC:23378269 OMA:FREVYDI
Uniprot:Q5LQQ2
Length = 812
Score = 208 (78.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 84/295 (28%), Positives = 137/295 (46%)
Query: 77 RQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
R L D S + L ++G+D FL++ D+A L G T+ N++GG D +
Sbjct: 479 RGAAGLIDYSMLGKLMVEGRDAEAFLQRACTNDMA-LPVGRVAYTLMLNDHGGIESDVTV 537
Query: 137 TKVKDDHIYLVVNAGC---RDKDLAHIEAHMKSFTAKGGDVSWHIHDERS---LLALQGP 190
+ D ++V++A RD+D H+++ DV + D S +L+L GP
Sbjct: 538 ARHGPDS-FMVMSAISHTRRDRD------HLRNLIRPDEDV--RLRDATSAYAVLSLCGP 588
Query: 191 LAAPVLQHLTKDDLSKLYFGEFRIL---DINGVSCFLTRTGYTGEDGFEISVPSERAVDL 247
+ +L + DLS F F L I F R YTG+ G+EI V + A +
Sbjct: 589 KSRQILADVADIDLSDAAF-PFNSLARFHIGHAPVFAQRLSYTGDLGWEIFVTPDFAEHV 647
Query: 248 AKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG 306
++ + +RL G A ++LR+EAG +G+DM P + GL + + K +A
Sbjct: 648 FDVLMASGAPQGLRLVGGEALNALRIEAGFAHWGHDMAYTEAPHQVGLGF-VCKPDKAVP 706
Query: 307 GFLGAEKIL--KQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFS 359
F+G + L K +GP + + G P H++ + G +G +TSG FS
Sbjct: 707 -FIGRDACLARKAAGKGPFLCSIRL-TEGTPLLHHNEPVLQGGAVVGFVTSGAFS 759
Score = 38 (18.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 34 AENLKKTALHDFHVANGGKMVPFAGWSMP 62
A L++T + A+G GW P
Sbjct: 418 ARGLRRTPFYHVMKAHGAAYGEVQGWERP 446
>TIGR_CMR|SPO_1579 [details] [associations]
symbol:SPO_1579 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006222
InterPro:IPR006223 Pfam:PF01571 PIRSF:PIRSF006487 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 KO:K00605 PANTHER:PTHR13847:SF5
HOGENOM:HOG000239381 RefSeq:YP_166820.1 ProteinModelPortal:Q5LT35
GeneID:3192995 KEGG:sil:SPO1579 PATRIC:23376481 OMA:MGTAWTY
ProtClustDB:CLSK864705 Uniprot:Q5LT35
Length = 381
Score = 196 (74.1 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 98/361 (27%), Positives = 153/361 (42%)
Query: 38 KKTALHDFHVANGGKMVPFAGWSMPIQYK--DSIMESTLNC-RQNGSLFDVSHMCGLSLK 94
+ +AL H GG++ + G Y D ++ R L DVS + + L
Sbjct: 6 RTSALAQRHAEIGGELEDWNGMGTAWFYDHTDERAKADYEAVRTKAGLMDVSGLKKIHLS 65
Query: 95 GKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRD 154
G +++ +V L PG ++ G IDD VI ++ ++ LV G
Sbjct: 66 GPHAAAVIDRATTRNVDKLMPGRAVYACMLDDRGLFIDDCVIYRLSVNNWMLVHGTGTGH 125
Query: 155 KDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVL-QHLTK-DDLSKLYFGEF 212
+ LA A G +VS D+ ++LQGP+A L +H+ DL+ YFG
Sbjct: 126 ESLA--------MAAYGKNVSMIFDDDLHDMSLQGPVAVDFLAKHVPGIRDLA--YFGII 175
Query: 213 RILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLTGLGARDSL 270
+ + G ++RTGYTGE G+EI A+ L AILE K G V + D L
Sbjct: 176 QT-KLFGKPVMISRTGYTGERGYEIFCEGRHAIALWDAILEDGKDMGIVPVQ-FSTLDLL 233
Query: 271 RLEAGLCLY-GNDMEQHVTPVEA-GLT-WAIGKRRRAE-G--GFLGAEK-ILKQLDEGPP 323
R E+ L Y G++ E + + G + W +G G GF GAE ++ E
Sbjct: 234 RTESYLLFYPGDNSETYPFADDTCGDSLWELGLEFTVSPGKIGFRGAENHYARKGKERFK 293
Query: 324 VRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVK 383
+ V G PA + + + G +G +T G S N+ + + GTK+
Sbjct: 294 IYGVKL-EGTTPADMGAPLLKD-GEVVGVVTFGMNSDLNGHNVGIARMPVDCAVPGTKLT 351
Query: 384 I 384
+
Sbjct: 352 V 352
>MGI|MGI:2183102 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10090 "Mus
musculus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=ISO] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008480
"sarcosine dehydrogenase activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
MGI:MGI:2183102 GO:GO:0005739 GO:GO:0050660 GO:GO:0005759
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120
CTD:1757 HOVERGEN:HBG002326 KO:K00314 OMA:PHHDVIK OrthoDB:EOG4XKV66
GO:GO:0008480 EMBL:BC003456 IPI:IPI00136213 RefSeq:NP_619606.1
UniGene:Mm.278467 ProteinModelPortal:Q99LB7 SMR:Q99LB7
STRING:Q99LB7 PhosphoSite:Q99LB7 PaxDb:Q99LB7 PRIDE:Q99LB7
Ensembl:ENSMUST00000102886 GeneID:192166 KEGG:mmu:192166
InParanoid:Q99LB7 NextBio:371164 Bgee:Q99LB7 CleanEx:MM_SARDH
Genevestigator:Q99LB7 GermOnline:ENSMUSG00000009614 Uniprot:Q99LB7
Length = 919
Score = 198 (74.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 90/361 (24%), Positives = 148/361 (40%)
Query: 69 IMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENG 128
I + L CR ++F++S+ L G D + L ADV PG+ T N+ G
Sbjct: 558 IQKECLACRGAAAVFNMSYFGKFYLLGVDARKAADWLFSADV-NRPPGSTVYTCMLNQRG 616
Query: 129 GSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHMKS--FTAKGGD 173
G+ D ++++ + D YL V + +HI ++ F + D
Sbjct: 617 GTESDLTVSRLAPGTQASPLVPAFEGDCYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMD 676
Query: 174 VSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTG 231
S ++ +L++QGP + +LQ + DLS F +++ G R + G
Sbjct: 677 SS----EDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVG 732
Query: 232 EDGFEISVPSERAVDLAKAILEKS--EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTP 289
E G+E+ VP + + +A++ G V G A DSL +E G + D+ +P
Sbjct: 733 ELGWELHVPRASCLPVYRAVMAAGARHGLVN-AGYRAIDSLSIEKGYRHWHADLRPDDSP 791
Query: 290 VEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNP 349
+EAGL + + + FLG E + KQ G R + + G
Sbjct: 792 LEAGLAFTC--KLKTSVPFLGREALEKQRATGLRRRLICLTVEEEVPMFGLEAIWRNGQV 849
Query: 350 IGEITSGGFSPCLKKNIAMGYVK--SGLHKAGTKVK-----IEVRGKAYDGNI-TKMPFV 401
+G + F + K IA GY++ SG + VK +E G Y + K PF
Sbjct: 850 VGHVRRADFGFTVNKTIAYGYIRDPSGGPVSLDFVKNGEYALERMGVTYAAQVHLKSPFD 909
Query: 402 P 402
P
Sbjct: 910 P 910
Score = 46 (21.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++R D E ++T LH + NGG +
Sbjct: 112 GLLWQLRPSDVEVELLAHTRQVVSR-----DLE--EETGLHTGWIQNGGLFI 156
>UNIPROTKB|D4A9I9 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 IPI:IPI00557713
ProteinModelPortal:D4A9I9 Ensembl:ENSRNOT00000043905
ArrayExpress:D4A9I9 Uniprot:D4A9I9
Length = 920
Score = 200 (75.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 91/361 (25%), Positives = 147/361 (40%)
Query: 69 IMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENG 128
I + L CR ++F++S+ L G D + L ADV PG+ T N+ G
Sbjct: 559 IQKECLACRTAAAVFNMSYFGKFYLLGADARKAADWLFSADV-NRPPGSTVYTCMLNQRG 617
Query: 129 GSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHMKS--FTAKGGD 173
G+ D ++ + + D YL V + +HI ++ F + D
Sbjct: 618 GTESDLTVSCLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMD 677
Query: 174 VSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTG 231
S ++ +L++QGP + +LQ + DLS F +++ G R + G
Sbjct: 678 CS----EDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVG 733
Query: 232 EDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTP 289
E G+E+ VP + + +A++ K L G R DSL +E G + D+ +P
Sbjct: 734 ELGWELHVPQASCLPVYRAVMAAG-AKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDSP 792
Query: 290 VEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNP 349
+EAGL + + + FLG E + KQ G R V + G
Sbjct: 793 LEAGLAFTC--KLKTSVPFLGREALEKQRATGLRRRLVCLTVEEEVPMFGLEAIWRNGQV 850
Query: 350 IGEITSGGFSPCLKKNIAMGYVK--SGLHKAGTKVK-----IEVRGKAYDGNI-TKMPFV 401
+G + F + K IA GY++ SG + VK +E G Y + K PF
Sbjct: 851 VGHVRRADFGFTVNKTIAYGYIRDPSGGPVSLDFVKNGDYALERMGVTYAAQVHLKSPFD 910
Query: 402 P 402
P
Sbjct: 911 P 911
Score = 42 (19.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++ H D E ++T LH + NGG +
Sbjct: 112 GLLWQLRPSDVEVELLAHTRQVVS--H---DLE--EETGLHTGWIQNGGLFI 156
>RGD|621125 [details] [associations]
symbol:Sardh "sarcosine dehydrogenase" species:10116 "Rattus
norvegicus" [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;ISS] [GO:0005759 "mitochondrial
matrix" evidence=IDA] [GO:0006545 "glycine biosynthetic process"
evidence=TAS] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0008480 "sarcosine dehydrogenase activity" evidence=TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA;NAS] [GO:0042426
"choline catabolic process" evidence=NAS;TAS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IDA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 198 (74.8 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 91/361 (25%), Positives = 147/361 (40%)
Query: 69 IMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENG 128
I + L CR ++F++S+ L G D + L ADV PG+ T N+ G
Sbjct: 558 IQKECLACRTAAAVFNMSYFGKFYLLGADARKAPDWLFSADV-NRPPGSTVYTCMLNQRG 616
Query: 129 GSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHMKS--FTAKGGD 173
G+ D ++ + + D YL V + +HI ++ F + D
Sbjct: 617 GTESDLTVSCLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMD 676
Query: 174 VSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTG 231
S ++ +L++QGP + +LQ + DLS F +++ G R + G
Sbjct: 677 CS----EDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVG 732
Query: 232 EDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTP 289
E G+E+ VP + + +A++ K L G R DSL +E G + D+ +P
Sbjct: 733 ELGWELHVPQASCLPVYRAVMAAG-AKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDSP 791
Query: 290 VEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNP 349
+EAGL + + + FLG E + KQ G R V + G
Sbjct: 792 LEAGLAFTC--KLKTSVPFLGREALEKQRATGLRRRLVCLTVEEEVPMFGLEAIWRNGQV 849
Query: 350 IGEITSGGFSPCLKKNIAMGYVK--SGLHKAGTKVK-----IEVRGKAYDGNI-TKMPFV 401
+G + F + K IA GY++ SG + VK +E G Y + K PF
Sbjct: 850 VGHVRRADFGFTVNKTIAYGYIRDPSGGPVSLDFVKNGDYALERMGVTYAAQVHLKSPFD 909
Query: 402 P 402
P
Sbjct: 910 P 910
Score = 42 (19.8 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++ H D E ++T LH + NGG +
Sbjct: 112 GLLWQLRPSDVEVELLAHTRQVVS--H---DLE--EETGLHTGWIQNGGLFI 156
>UNIPROTKB|Q64380 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] UniPathway:UPA00292
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
EMBL:AF067650 RGD:621125 GO:GO:0050660 GO:GO:0005759 GO:GO:0042426
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 GO:GO:0006545 HOGENOM:HOG000251716 CTD:1757
HOVERGEN:HBG002326 KO:K00314 OrthoDB:EOG4XKV66 GO:GO:0008480
EMBL:U62481 EMBL:L79910 IPI:IPI00209807 RefSeq:NP_446116.1
UniGene:Rn.89832 ProteinModelPortal:Q64380 STRING:Q64380
PRIDE:Q64380 GeneID:114123 KEGG:rno:114123 UCSC:RGD:621125
InParanoid:Q64380 BioCyc:MetaCyc:MONOMER-16116 NextBio:618353
ArrayExpress:Q64380 Genevestigator:Q64380
GermOnline:ENSRNOG00000006916 Uniprot:Q64380
Length = 919
Score = 198 (74.8 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 91/361 (25%), Positives = 147/361 (40%)
Query: 69 IMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENG 128
I + L CR ++F++S+ L G D + L ADV PG+ T N+ G
Sbjct: 558 IQKECLACRTAAAVFNMSYFGKFYLLGADARKAPDWLFSADV-NRPPGSTVYTCMLNQRG 616
Query: 129 GSIDDSVITKV-------------KDDHIYLVVNAGCRDKDLAHIEAHMKS--FTAKGGD 173
G+ D ++ + + D YL V + +HI ++ F + D
Sbjct: 617 GTESDLTVSCLAPGAQASPLAPAFEGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMD 676
Query: 174 VSWHIHDERSLLALQGPLAAPVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTG 231
S ++ +L++QGP + +LQ + DLS F +++ G R + G
Sbjct: 677 CS----EDLGMLSIQGPASRDILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVG 732
Query: 232 EDGFEISVPSERAVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTP 289
E G+E+ VP + + +A++ K L G R DSL +E G + D+ +P
Sbjct: 733 ELGWELHVPQASCLPVYRAVMAAG-AKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDSP 791
Query: 290 VEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNP 349
+EAGL + + + FLG E + KQ G R V + G
Sbjct: 792 LEAGLAFTC--KLKTSVPFLGREALEKQRATGLRRRLVCLTVEEEVPMFGLEAIWRNGQV 849
Query: 350 IGEITSGGFSPCLKKNIAMGYVK--SGLHKAGTKVK-----IEVRGKAYDGNI-TKMPFV 401
+G + F + K IA GY++ SG + VK +E G Y + K PF
Sbjct: 850 VGHVRRADFGFTVNKTIAYGYIRDPSGGPVSLDFVKNGDYALERMGVTYAAQVHLKSPFD 909
Query: 402 P 402
P
Sbjct: 910 P 910
Score = 42 (19.8 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 GSLWQLGQS-ITRRLARADKKTIARRHFASDAENLKKTALHDFHVANGGKMV 54
G LWQL S + L ++ ++ H D E ++T LH + NGG +
Sbjct: 112 GLLWQLRPSDVEVELLAHTRQVVS--H---DLE--EETGLHTGWIQNGGLFI 156
>TIGR_CMR|SPO_1746 [details] [associations]
symbol:SPO_1746 "sarcosine oxidase, alpha subunit family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016647
"oxidoreductase activity, acting on the CH-NH group of donors,
oxygen as acceptor" evidence=ISS] InterPro:IPR000103
InterPro:IPR006222 InterPro:IPR006277 InterPro:IPR013027
Pfam:PF01571 PRINTS:PR00368 PRINTS:PR00469 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046653 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 GO:GO:0008115
HOGENOM:HOG000218134 KO:K00302 PANTHER:PTHR13847:SF41
TIGRFAMs:TIGR01372 RefSeq:YP_166984.1 ProteinModelPortal:Q5LSM1
GeneID:3193191 KEGG:sil:SPO1746 PATRIC:23376815 OMA:YGMEALN
ProtClustDB:CLSK2463880 Uniprot:Q5LSM1
Length = 977
Score = 194 (73.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 91/388 (23%), Positives = 160/388 (41%)
Query: 40 TALHDFHVANGGKMVPFAGWSMPIQY-KDSIMESTLNC-RQNG------SLFDVSHMCGL 91
T H ++ G M+ W P + + + +C R+ G + DVS + +
Sbjct: 591 TTSHAATLSRGAPMIEAGLWYRPSYFPQPGETDWQQSCDREVGYVRNAVGVADVSTLGKI 650
Query: 92 SLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAG 151
++G D L+ + + L G + E+G +DD ++ +DH +
Sbjct: 651 DIQGTDAARLLDFVYTNMFSTLKVGRVRYGLMLREDGHVMDDGTTARLGEDHYLMTTTTA 710
Query: 152 CRDKDLAHIEAHMKSFTAKGGDVSWHIH-----DERSLLALQGPLAAPVLQHL--TKDDL 204
+ +AH+E F A+G W + ++ + A+ GP A VL L T D
Sbjct: 711 AAGQVMAHLE-----FVAQGLHPEWDVSICSVTEQWAQFAVAGPRAREVLNGLLDTPIDA 765
Query: 205 SKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGKVR-LTG 263
+ F + + GV L R ++GE+G+EI+VP+ L ++ + E G
Sbjct: 766 AGWPFMSCGAVSVLGVGGRLFRISFSGEEGYEIAVPARYGASLFDLLVTRVEALGGGAYG 825
Query: 264 LGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL----GAEKILKQLD 319
+ A + LR+E G + ++ VT + G+ + R+ G + G E+ ++
Sbjct: 826 MEALNVLRIEKGFITHA-EIHGRVTAYDIGMGGMVSARKDCIGKTMAQRPGLEEPGRERL 884
Query: 320 EG-PPVRRVG-FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHK 377
G P+ G AG R E G +TS SP L + I +G++ G +
Sbjct: 885 VGLKPITAEGTLLAGAHLYRQEDTARREHDQ--GYVTSVCHSPVLGRMIGLGFLADGPDR 942
Query: 378 AGTKVKIE--VRG-KAYDGNITKMPFVP 402
G VK+ +RG Y +T + F P
Sbjct: 943 IGEIVKMVDGLRGVTTYCEVVTPVFFDP 970
>WB|WBGene00013718 [details] [associations]
symbol:Y106G6H.5 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
EMBL:AL032631 HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120
OMA:DWFDIVG RefSeq:NP_492730.2 ProteinModelPortal:Q9U300 SMR:Q9U300
STRING:Q9U300 PaxDb:Q9U300 EnsemblMetazoa:Y106G6H.5.1
EnsemblMetazoa:Y106G6H.5.2 GeneID:172922 KEGG:cel:CELE_Y106G6H.5
UCSC:Y106G6H.5.1 CTD:172922 WormBase:Y106G6H.5 InParanoid:Q9U300
NextBio:877543 Uniprot:Q9U300
Length = 855
Score = 193 (73.0 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 76/311 (24%), Positives = 139/311 (44%)
Query: 76 CRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDS 134
CR+ L D+S + G+D V +L+ L A+V P GT T ++ GG + D
Sbjct: 506 CRERVGLMDMSSFSKYDITGEDAVEYLQFLCSANVD--EPIGTTVYTGMQHQKGGYVTDC 563
Query: 135 VITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER---SLLALQGPL 191
++++ + ++V +++ L ++ A+ H+ D + L L GP
Sbjct: 564 TLSRLGEKKFFMVAPTIQQERVLVWMKKWQAILKARV-----HVQDVTGAYTALDLIGPS 618
Query: 192 AAPVLQHLTKDDLSKLYFGEFRILDIN-GVSCFLTRTGYT--GEDGFEISVPSERAVDLA 248
+ ++ +T +S F FR +IN G++ + T GE G+ I VP+E A ++
Sbjct: 619 SRYLMGDITGLSMSSNDFPTFRCQEINIGMATGIRAISVTHCGELGWVIYVPNEVAQNVY 678
Query: 249 KAILEKS-EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG 307
+ IL+ E ++ G LR+E +G D+ VTPVE G + + ++
Sbjct: 679 EKILDAGKEYSLQHAGYYTLRQLRIEKFYVYWGQDINATVTPVECGRLFRVDFKK----D 734
Query: 308 FLGAEKILKQLDEGPPVRRVGFFAGG-----PPARSHSKVHDEQGNPIGEITSGGFSPCL 362
F+G + + +Q++ G R V G P + + G +G TS + L
Sbjct: 735 FIGKKALEEQVERGVSKRFVQLLVDGHDKETDPWPQGGETILKDGRAVGLTTSAAYGFTL 794
Query: 363 KKNIAMGYVKS 373
+ +GYV++
Sbjct: 795 GCQVCIGYVEN 805
>TIGR_CMR|SPO_0635 [details] [associations]
symbol:SPO_0635 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
ProtClustDB:CLSK863205 RefSeq:YP_165890.1 ProteinModelPortal:Q5LVR5
GeneID:3195325 KEGG:sil:SPO0635 PATRIC:23374535 OMA:DEYMLYA
Uniprot:Q5LVR5
Length = 835
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 88/341 (25%), Positives = 145/341 (42%)
Query: 78 QNG-SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
+NG L D + +KG FL+ + + G LT G + + I
Sbjct: 497 RNGVGLIDATAFTKHVVKGPGATQFLDWFTCNKLPKV--GRINLTYALTSAGTTRTEYTI 554
Query: 137 TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWH-IHDERSLLALQGPLAAPV 195
+ +++ Y+V + D + + + G + + + + A+ GP + V
Sbjct: 555 VRNGENNYYIVSAGAWTEYDADFLRKAAEDKMEEFGYIEIQDVTTQWGVFAIAGPKSRDV 614
Query: 196 LQHLTKD-D----LSKLYFGEFRILDINGVSCFLT--RTGYTGEDGFEISVPSERAVDLA 248
L+ + KD D LS F I C + R YTGE G+E+ P E L
Sbjct: 615 LKEVIKDADPETALSNKRFPWLSARQIELGMCPVNAIRVAYTGELGWELHHPIEMQRYLW 674
Query: 249 KAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI--GK--RRR 303
+L E ++L G A++ LR E +G ++ + TP+EA L + GK +
Sbjct: 675 DLLLAAGEKHGMKLVGARAQNWLRQEKSYRAFGTELGRDATPLEADLPRFVDLGKDFHGK 734
Query: 304 AEGGFLGAE-KILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCL 362
AE G K L +GP P R ++ +G +G +TSGG+S
Sbjct: 735 AEMEAKGIRSKCCTLLIDGPS-------DADPWGRE--ALYTPEGARVGRLTSGGYSVAF 785
Query: 363 KKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNIT-KMPFVP 402
+K+I MGYVK L GTK+K+++ + +D +T P+ P
Sbjct: 786 EKSIGMGYVKPELAVEGTKLKVKMLDQLWDAVVTCDSPYDP 826
>UNIPROTKB|B4E1J9 [details] [associations]
symbol:DMGDH "cDNA FLJ50354, highly similar to
Dimethylglycine dehydrogenase, mitochondrial (EC 1.5.99.2)"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 EMBL:AC020937
EMBL:AC008502 GO:GO:0004047 GO:GO:0006546 EMBL:AC016559
UniGene:Hs.655653 HGNC:HGNC:24475 EMBL:AK303873 IPI:IPI01013014
SMR:B4E1J9 STRING:B4E1J9 Ensembl:ENST00000540686 UCSC:uc011ctg.1
Uniprot:B4E1J9
Length = 394
Score = 183 (69.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 67/229 (29%), Positives = 104/229 (45%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q ++ D+S ++KG+D + L+ L A + P G + G +
Sbjct: 147 QRVAVTDLSPFGKFNIKGQDSIRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 202
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE KGG DV +I DE +L + GP A
Sbjct: 203 VSHQSPGEFLLITGSGSELHDLRWIEEE----AVKGGYDVEIKNITDELGVLGVAGPQAR 258
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E +V L AI
Sbjct: 259 KVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAI 318
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
+ + EG + G A ++LRLE +G +M P+EAGL + +
Sbjct: 319 MNAGQEEG-IDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFV 366
>FB|FBgn0034276 [details] [associations]
symbol:CG6385 species:7227 "Drosophila melanogaster"
[GO:0008480 "sarcosine dehydrogenase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 FlyBase:FBgn0034276
EMBL:BT001625 ProteinModelPortal:Q8IGS5 STRING:Q8IGS5 PRIDE:Q8IGS5
InParanoid:Q8IGS5 Bgee:Q8IGS5 Uniprot:Q8IGS5
Length = 907
Score = 192 (72.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 89/366 (24%), Positives = 145/366 (39%)
Query: 64 QYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVF 123
+Y D I L CR N +F++S+ L L G + L A+ P T
Sbjct: 535 EYHDLIGSEALACRNNAVVFNMSYFAKLLLDGPQAQEAADWLFSANT-NRDPSKTVYTCA 593
Query: 124 TNENGGSIDDSVIT------------KVKDDHIYLVVNAGCRDKDLAHI--EAHMKSFTA 169
N+ GG D I+ K+ Y+V + + E K F A
Sbjct: 594 LNDAGGVEADVTISRLAPGSGEVYNPKINGQGFYIVAGGASAFYTYSVLLAEIRRKGFNA 653
Query: 170 KGGDVSWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFG--EFRILDINGVSCFLTRT 227
D++ E ++++QGP + +LQ L DLS + R+ V L R
Sbjct: 654 SLKDLT----AELGVISIQGPNSRKILQPLIDCDLSDEHVAPNSTRLAKFGDVGLRLLRV 709
Query: 228 GYTGEDGFEISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQH 286
+ GE G+E+ VP + + +++++ G+ +R G + SL E G L+ D+
Sbjct: 710 SFVGELGYELHVPKKDCAAVYRSLMKAGAGEDLRNAGYRSLYSLSSEKGYHLWSFDLRPD 769
Query: 287 VTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDE 345
TP+EAGL + R+ + G I Q EG R V P V+
Sbjct: 770 DTPLEAGLGFTC---RKTGADYRGKAAIENQRAEGLKKRLVYLTLRDQVPIWGLEGVY-R 825
Query: 346 QGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKA-------GTKVKIEVRGKAYDGNI-TK 397
G P+G + ++ L K++ YV K + ++++ GK Y + +
Sbjct: 826 NGEPVGILRRAEYAYTLGKSLGQTYVSRPDGKIIDADYIRNGEYEVDILGKKYRADCHLR 885
Query: 398 MPFVPT 403
PF PT
Sbjct: 886 SPFDPT 891
Score = 41 (19.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 36 NLKKTALHDFHVANGGKMVPFAGWSMP 62
+ +K LHD + G M GW P
Sbjct: 462 DFQKDPLHDEMMKAGAVMEEKQGWERP 488
>TIGR_CMR|SPO_3400 [details] [associations]
symbol:SPO_3400 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_168596.1
ProteinModelPortal:Q5LN12 GeneID:3193141 KEGG:sil:SPO3400
PATRIC:23380255 OMA:DPMPEDF Uniprot:Q5LN12
Length = 815
Score = 187 (70.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 87/338 (25%), Positives = 148/338 (43%)
Query: 59 WSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTG 118
W ++ I E R + + D+ +KG L L+ GL P G
Sbjct: 475 WGRSGPWEQRIKEECQAVRDHCGVLDLPGFSRFLVKGAGAAEALRGLI---TGGL-PKVG 530
Query: 119 TLT-VFTNENGGSI--DDSVITKVKDDHIYLVV-NAGCRDKDLAHIEAHMKSFTAKGGDV 174
+ V+ +E+ G I + S I +D+ + + A D+D+ + A T + DV
Sbjct: 531 RMNLVYISESRGRILTEMSCIRLGEDEFVMITAATAQWHDRDIL-LGAMPAGVTVE--DV 587
Query: 175 SWHIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDG 234
+ R L + GP + +L L+ DLS+ + + + G FL R + GE G
Sbjct: 588 T----TTRDTLIVTGPKSREILAGLSDADLSQGWLTH-QAATVAGQPAFLIRVSFAGELG 642
Query: 235 FEISVPSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGL 294
+E+ +E + A+L G + G+ A +SLRLE G + D+ + +E GL
Sbjct: 643 WEVHALNEHMPAIYDALL--GAG-AKPFGMWALNSLRLEKGYRAWKGDLSTDYSMLEGGL 699
Query: 295 TWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF--AGGPPARSHSKV-HDEQGNPIG 351
+ K + + F G IL + G V AG A S + HD G +G
Sbjct: 700 ERFV-KLDKPQD-FPGKAAILAEKQRGVKKSFVTLLVEAGDCDAPYMSCLWHD--GQIVG 755
Query: 352 EITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 389
E TSG + + ++A+G V++ L GT++++E+ G+
Sbjct: 756 ETTSGAWGYRINASVALGMVRADLAVPGTELEVEIYGQ 793
Score = 44 (20.5 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 34 AENLKKTALHDFHVANGGKMVPFAGW 59
A + K + +HD A GG M + GW
Sbjct: 429 APDRKLSPVHDRVKAQGGVMGVYNGW 454
>UNIPROTKB|F8W6P8 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 HGNC:HGNC:24475 IPI:IPI00178676
ProteinModelPortal:F8W6P8 PRIDE:F8W6P8 Ensembl:ENST00000380311
UCSC:uc011ctf.1 ArrayExpress:F8W6P8 Bgee:F8W6P8 Uniprot:F8W6P8
Length = 573
Score = 183 (69.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 67/229 (29%), Positives = 104/229 (45%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q ++ D+S ++KG+D + L+ L A + P G + G +
Sbjct: 326 QRVAVTDLSPFGKFNIKGQDSIRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 381
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE KGG DV +I DE +L + GP A
Sbjct: 382 VSHQSPGEFLLITGSGSELHDLRWIEEE----AVKGGYDVEIKNITDELGVLGVAGPQAR 437
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E +V L AI
Sbjct: 438 KVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAI 497
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
+ + EG + G A ++LRLE +G +M P+EAGL + +
Sbjct: 498 MNAGQEEG-IDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFV 545
>UNIPROTKB|Q8TCC6 [details] [associations]
symbol:DMGDH "Dimethylglycine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 EMBL:AC020937 EMBL:AC008502 GO:GO:0004047
GO:GO:0006546 EMBL:AC016559 UniGene:Hs.655653 HGNC:HGNC:24475
HOGENOM:HOG000251716 EMBL:BC022388 IPI:IPI00985114 SMR:Q8TCC6
STRING:Q8TCC6 Ensembl:ENST00000523732 HOVERGEN:HBG103457
Uniprot:Q8TCC6
Length = 613
Score = 183 (69.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 67/229 (29%), Positives = 104/229 (45%)
Query: 78 QNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTV--FTNENGGSIDDSV 135
Q ++ D+S ++KG+D + L+ L A + P G + G +
Sbjct: 366 QRVAVTDLSPFGKFNIKGQDSIRLLDHLF----ANVIPKVGFTNISHMLTPKGRVYAELT 421
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-DVSW-HIHDERSLLALQGPLAA 193
++ L+ +G DL IE KGG DV +I DE +L + GP A
Sbjct: 422 VSHQSPGEFLLITGSGSELHDLRWIEEE----AVKGGYDVEIKNITDELGVLGVAGPQAR 477
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
VLQ LT +DLS F + + L ++ + R YTGE G+E+ E +V L AI
Sbjct: 478 KVLQKLTSEDLSDDVFKFLQTKSLKVSNIPVTAIRISYTGELGWELYHRREDSVALYDAI 537
Query: 252 LE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
+ + EG + G A ++LRLE +G +M P+EAGL + +
Sbjct: 538 MNAGQEEG-IDNFGTYAMNALRLEKAFRAWGLEMNCDTNPLEAGLEYFV 585
>TIGR_CMR|SPO_0564 [details] [associations]
symbol:SPO_0564 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165824.1
ProteinModelPortal:Q5LVY1 GeneID:3193816 KEGG:sil:SPO0564
PATRIC:23374391 OMA:AKQVGRM Uniprot:Q5LVY1
Length = 802
Score = 184 (69.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 80/332 (24%), Positives = 131/332 (39%)
Query: 77 RQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI 136
R+ L D++ + G + +L+KL + APG L V +E G D +
Sbjct: 476 REGVGLLDITGFSRFEVSGPNAEAWLDKLFATKLP--APGRARLAVMLSETGRLKGDLTL 533
Query: 137 TKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVL 196
D +++ + R + H+ G V + +E L GP + V+
Sbjct: 534 LNWGDGTWWIMGSYYLRAWHMRWFNDHLDD----GVSVR-DLGEEICGFGLVGPKSRTVI 588
Query: 197 QHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSE 256
+ L + D+S+L F DI V + R TGE G+EI+ + L + +LE
Sbjct: 589 EKLAEQDISELKFMGCGSFDIGLVRARVARMSVTGEMGYEINCRYGDHIALRRMLLEAGA 648
Query: 257 GK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLT-WAIGKRRRAEGGFLGAEKI 314
G+ + G A S R+E ++ + Q TP + W + G F+G +
Sbjct: 649 GEDICEVGFNALLSTRIEKSFGIWSAEFTQDRTPGMTAMDRWIAWDK----GDFIGRDAA 704
Query: 315 LKQLDEGPPVR---RVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYV 371
+ + D P R + A A + V + G IG +TSG + K++AM V
Sbjct: 705 IAERDGNGPARVQVTLEVDAADADASGYEPVWAD-GVQIGFVTSGAYGHYTGKSLAMALV 763
Query: 372 KSGLHKAGTKVKIEVRGKAYDGNI-TKMPFVP 402
GT V + V G I P+ P
Sbjct: 764 DRDRAHPGTSVSVHVVGVERPATIIAPSPYDP 795
>UNIPROTKB|F1NG59 [details] [associations]
symbol:PDPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 OMA:DWFDIVG EMBL:AADN02051588
EMBL:AADN02051589 IPI:IPI00581586 ProteinModelPortal:F1NG59
Ensembl:ENSGALT00000004241 Uniprot:F1NG59
Length = 887
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 75/325 (23%), Positives = 143/325 (44%)
Query: 76 CRQNGSLFDVSHMCG--LSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDD 133
C++ + D+S +S G + L+ L D+ + G T NENGG +D
Sbjct: 525 CKEAVCVIDMSSFTKFEISSTGDQALQSLQYLFSNDL-DVPVGHVVHTGMLNENGGYEND 583
Query: 134 SVITKVKDDHIYLVVNAGCRDKDLAHIEAHM---KSFTAKGGDVSWHIHDERSLLALQGP 190
I ++ +++ + A ++ H+ + T + DV+W + + L L GP
Sbjct: 584 CSIARLSKRSFFMISPTDQQVHCWAWLKNHLPEDSNLTIE--DVTW----KYTALNLIGP 637
Query: 191 LAAPVLQHLTKDDLSKLYFGEFRILDI-----NGVSCFLTRTGYTGEDGFEISVPSERAV 245
A VL L+ ++ +F F ++ NG+ ++ T +TGE GF + +P E A+
Sbjct: 638 RAVDVLSELSYAPMTPEHFPSFFCKEMSVGYANGIRV-MSIT-HTGEPGFMLYIPIEYAL 695
Query: 246 DLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRA 304
+ ++ + +R G A SLR+E +G D++ TP+E G + + +
Sbjct: 696 HVYNEVMNMGQKYGIRNAGYYALRSLRIEKFFAFWGQDLDAFTTPMECGREFQVKLEKGM 755
Query: 305 EGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQGNPIGEITSGGFS 359
+ F+G E +L+Q G R F + G +G+ TS +S
Sbjct: 756 D--FIGQEALLEQKQNGVYKRFTMFILEDHDTDMDLWPWWGEPIFRNGRYVGKTTSSAYS 813
Query: 360 PCLKKNIAMGYVKSGLHKAGTKVKI 384
L++++ +G+V+ K G ++ +
Sbjct: 814 YTLERHVCLGFVQHFDEKTGEELVV 838
>UNIPROTKB|A8MT40 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005739 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
EMBL:AC009060 EMBL:AC009022 HGNC:HGNC:30264 IPI:IPI00872462
ProteinModelPortal:A8MT40 SMR:A8MT40 STRING:A8MT40 PaxDb:A8MT40
Ensembl:ENST00000398122 HOGENOM:HOG000199501 HOVERGEN:HBG090076
ArrayExpress:A8MT40 Bgee:A8MT40 Uniprot:A8MT40
Length = 779
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 79/320 (24%), Positives = 136/320 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 409 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDL-DVPVGHIVHTGMLN 467
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM-KSFTAKGGDVSWHIHDERSL 184
E GG +D I ++ +++ + A ++ HM K DV+W + +
Sbjct: 468 EGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLLEDVTW----KYTA 523
Query: 185 LALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISV 239
L L GP A VL L T D L+ E + NG+ ++ T +TGE GF + +
Sbjct: 524 LNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFMLYI 581
Query: 240 PSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 582 PIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRE--- 638
Query: 299 GKRRRAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQGNPIG 351
R + E G F+G + +L+Q G R F + + G +G
Sbjct: 639 -SRVKLEKGMDFIGRDALLQQKQNGVYKRLTMFILDDHDSDLDLWPWWGEPIYRNGQYVG 697
Query: 352 EITSGGFSPCLKKNIAMGYV 371
+ TS +S L++++ +G+V
Sbjct: 698 KTTSSAYSYSLERHVCLGFV 717
>UNIPROTKB|Q8NCN5 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005759 "mitochondrial
matrix" evidence=TAS] [GO:0006090 "pyruvate metabolic process"
evidence=TAS] [GO:0010510 "regulation of acetyl-CoA biosynthetic
process from pyruvate" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005759 GO:GO:0016491 GO:GO:0006090 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
GO:GO:0010510 EMBL:AC009060 HOGENOM:HOG000251716 CTD:55066
HOVERGEN:HBG103854 OrthoDB:EOG4NZTSJ EMBL:AB082521 EMBL:AK292502
EMBL:BX538153 EMBL:CR627404 EMBL:AC009022 EMBL:BC150251
IPI:IPI00168407 RefSeq:NP_060460.4 UniGene:Hs.461183
ProteinModelPortal:Q8NCN5 SMR:Q8NCN5 STRING:Q8NCN5
PhosphoSite:Q8NCN5 DMDM:182668644 PaxDb:Q8NCN5 PRIDE:Q8NCN5
Ensembl:ENST00000288050 Ensembl:ENST00000568530 GeneID:55066
KEGG:hsa:55066 UCSC:uc002eyf.1 GeneCards:GC16P070148
HGNC:HGNC:30264 neXtProt:NX_Q8NCN5 InParanoid:Q8NCN5 OMA:DWFDIVG
GenomeRNAi:55066 NextBio:58575 ArrayExpress:Q8NCN5 Bgee:Q8NCN5
Genevestigator:Q8NCN5 Uniprot:Q8NCN5
Length = 879
Score = 178 (67.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 79/320 (24%), Positives = 136/320 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 509 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDL-DVPVGHIVHTGMLN 567
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM-KSFTAKGGDVSWHIHDERSL 184
E GG +D I ++ +++ + A ++ HM K DV+W + +
Sbjct: 568 EGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLLEDVTW----KYTA 623
Query: 185 LALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISV 239
L L GP A VL L T D L+ E + NG+ ++ T +TGE GF + +
Sbjct: 624 LNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFMLYI 681
Query: 240 PSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 682 PIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRE--- 738
Query: 299 GKRRRAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQGNPIG 351
R + E G F+G + +L+Q G R F + + G +G
Sbjct: 739 -SRVKLEKGMDFIGRDALLQQKQNGVYKRLTMFILDDHDSDLDLWPWWGEPIYRNGQYVG 797
Query: 352 EITSGGFSPCLKKNIAMGYV 371
+ TS +S L++++ +G+V
Sbjct: 798 KTTSSAYSYSLERHVCLGFV 817
>UNIPROTKB|D4A8Z7 [details] [associations]
symbol:Sardh "Sarcosine dehydrogenase, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
IPI:IPI00781340 Ensembl:ENSRNOT00000061188 ArrayExpress:D4A8Z7
Uniprot:D4A8Z7
Length = 509
Score = 162 (62.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 71/281 (25%), Positives = 115/281 (40%)
Query: 136 ITKVKDDHIYLVVNAGCRDKDLAHIEAHMKS--FTAKGGDVSWHIHDERSLLALQGPLAA 193
+ + D YL V + +HI ++ F + D S ++ +L++QGP +
Sbjct: 227 VNRPPGDGYYLAVGGAVAQHNWSHINTVLQDQEFRCQLMDCS----EDLGMLSIQGPASR 282
Query: 194 PVLQHLTKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAI 251
+LQ + DLS F +++ G R + GE G+E+ VP + + +A+
Sbjct: 283 DILQDVLDADLSNEAFPFSTHQLVRAAGHLVRAIRLSFVGELGWELHVPQASCLPVYRAV 342
Query: 252 LEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+ K L G R DSL +E G + D+ +P+EAGL + + + FL
Sbjct: 343 MAAG-AKHGLVNAGYRAIDSLSIEKGYRHWHADLRSDDSPLEAGLAFTC--KLKTSVPFL 399
Query: 310 GAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMG 369
G E + KQ G R V + G +G + F + K IA G
Sbjct: 400 GREALEKQRATGLRRRLVCLTVEEEVPMFGLEAIWRNGQVVGHVRRADFGFTVNKTIAYG 459
Query: 370 YVK--SGLHKAGTKVK-----IEVRGKAYDGNI-TKMPFVP 402
Y++ SG + VK +E G Y + K PF P
Sbjct: 460 YIRDPSGGPVSLDFVKNGDYALERMGVTYAAQVHLKSPFDP 500
Score = 55 (24.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 65 YKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTG 118
+ + I + L CR ++F++S+ L G D + L ADV PG G
Sbjct: 182 HSEMIQKECLACRTAAAVFNMSYFGKFYLLGADARKAADWLFSADV-NRPPGDG 234
>TAIR|locus:2206051 [details] [associations]
symbol:AT1G60990 species:3702 "Arabidopsis thaliana"
[GO:0004047 "aminomethyltransferase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IGI] InterPro:IPR006222 Pfam:PF01571 EMBL:CP002684
GO:GO:0009507 eggNOG:COG0354 InterPro:IPR017703 TIGRFAMs:TIGR03317
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
UniGene:At.36556 UniGene:At.71340 EMBL:AK175484 IPI:IPI00536295
RefSeq:NP_001077748.1 RefSeq:NP_001117522.1 RefSeq:NP_176295.3
ProteinModelPortal:Q681Y3 PaxDb:Q681Y3 PRIDE:Q681Y3
EnsemblPlants:AT1G60990.1 EnsemblPlants:AT1G60990.2
EnsemblPlants:AT1G60990.3 GeneID:842391 KEGG:ath:AT1G60990
TAIR:At1g60990 HOGENOM:HOG000232517 InParanoid:Q681Y3 OMA:RLSWLHS
PhylomeDB:Q681Y3 ProtClustDB:CLSN2681534 Genevestigator:Q681Y3
Uniprot:Q681Y3
Length = 432
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 78/343 (22%), Positives = 145/343 (42%)
Query: 71 ESTLNCRQNGSLF-DVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGG 129
+ L+ NG + D+SH + + G D FL A+ L G G TVF
Sbjct: 103 DEALDAFDNGVVVVDLSHFGRIRVSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTAR 162
Query: 130 SIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQG 189
+ID + +K+ + V C+ + + ++ F A ++ I + L AL G
Sbjct: 163 TIDIAHAWIMKNAILLTVSPTTCQSI-IEMLNKYI--FFADKVEIK-DITKQTCLFALAG 218
Query: 190 PLAAPVLQHLTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAK 249
P + ++ L DL +G + +G+ + ++GF + + AV + K
Sbjct: 219 PKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLISDEGFTMLMSPGGAVSVWK 278
Query: 250 AILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFL 309
+L +EG + + G A + LR+ G ++ + +EAGL +I + G +
Sbjct: 279 TLL--AEGAIPM-GSVAWEKLRITQGRPAPERELSKEFNVLEAGLWNSISLNK---GCYK 332
Query: 310 GAEKILKQLD-EGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITS--GGFSPCLKKNI 366
G E I + + +G R G P + D G +G++TS GG + +
Sbjct: 333 GQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVD--GKKVGKLTSYTGGKNG--SGHF 388
Query: 367 AMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 409
+GY+K G V + G+ G ++++P++ + + PS
Sbjct: 389 GLGYIKKQAASIGNTVTV---GEDISGIVSEVPYL-ARQHPPS 427
>UNIPROTKB|F1P7E6 [details] [associations]
symbol:PDPR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 GeneTree:ENSGT00530000063120 OMA:DWFDIVG
EMBL:AAEX03004073 Ensembl:ENSCAFT00000032024 Uniprot:F1P7E6
Length = 850
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 80/322 (24%), Positives = 137/322 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 457 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDL-DVPVGHIVHTGMLN 515
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHM-KSFTAKGGDVSWHIHDERSL 184
E GG +D I ++ +++ + A ++ HM + DV+W + +
Sbjct: 516 EGGGYENDCSIARLSKRSFFMISPTDQQVHCWAWLKKHMPEDSNLLLEDVTW----KYTA 571
Query: 185 LALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISV 239
L L GP A VL L T D L+ E + NG+ ++ T +TGE GF + +
Sbjct: 572 LNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFMLYI 629
Query: 240 PSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI 298
P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 630 PIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGRE--- 686
Query: 299 GKRRRAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPI------ 350
R + E G F+G + +L+Q G R F + + G PI
Sbjct: 687 -SRVKLEKGMDFMGRDALLQQKQNGVYKRLTMFILDDHD--TDLDLWPWWGEPIYRNGQY 743
Query: 351 -GEITSGGFSPCLKKNIAMGYV 371
G+ TS +S L++++ +G+V
Sbjct: 744 AGKTTSSAYSYTLERHVCLGFV 765
>RGD|1308307 [details] [associations]
symbol:Pdpr "pyruvate dehydrogenase phosphatase regulatory
subunit" species:10116 "Rattus norvegicus" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006546 "glycine catabolic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 RGD:1308307 GO:GO:0005739 GO:GO:0016491 EMBL:CH473972
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 CTD:55066 OrthoDB:EOG4NZTSJ
OMA:DWFDIVG IPI:IPI00359656 RefSeq:NP_001100900.1 UniGene:Rn.21088
Ensembl:ENSRNOT00000038452 GeneID:307852 KEGG:rno:307852
UCSC:RGD:1308307 NextBio:657991 Uniprot:D3ZXA6
Length = 878
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 85/335 (25%), Positives = 144/335 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 508 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALESLQYLFSNDL-DVPVGHIVHTGMLN 566
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-----DVSWHIHD 180
E GG +D I ++ +++ D+ + H A + + K DV+W
Sbjct: 567 EYGGHENDCSIARLTKRSFFMISPT---DQQV-HCWAWLHKYLPKDSNLLLEDVTW---- 618
Query: 181 ERSLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGF 235
+ + L L GP A VL L T D L+ E + NG+ ++ T +TGE GF
Sbjct: 619 KYTALNLIGPRAVDVLSELSYAPMTPDHFPTLFCKEMSVGYANGIRV-MSMT-HTGEPGF 676
Query: 236 EISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGL 294
+ +P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 677 MLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECG- 735
Query: 295 TWAIGKRR-RAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPI- 350
G+ R + E G F+G + +L+Q G R V F + + G PI
Sbjct: 736 ----GESRVKLEKGIDFIGRDALLQQKQTGVYKRLVMFILDDHD--TDLDLWPWWGEPIY 789
Query: 351 ------GEITSGGFSPCLKKNIAMGYVKSGLHKAG 379
G+ TS +S L++++ +GYV + +G
Sbjct: 790 RNGKYAGKTTSSAYSYTLERHVCLGYVHNFSEDSG 824
>MGI|MGI:2442188 [details] [associations]
symbol:Pdpr "pyruvate dehydrogenase phosphatase regulatory
subunit" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 MGI:MGI:2442188
GO:GO:0005739 GO:GO:0005759 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
HOGENOM:HOG000251716 GeneTree:ENSGT00530000063120 CTD:55066
HOVERGEN:HBG103854 OrthoDB:EOG4NZTSJ OMA:DWFDIVG EMBL:AY223867
EMBL:AK129472 EMBL:BC120745 EMBL:BC125425 IPI:IPI00453792
RefSeq:NP_938050.1 UniGene:Mm.28350 UniGene:Mm.370024
ProteinModelPortal:Q7TSQ8 SMR:Q7TSQ8 PhosphoSite:Q7TSQ8
PaxDb:Q7TSQ8 PRIDE:Q7TSQ8 Ensembl:ENSMUST00000039333 GeneID:319518
KEGG:mmu:319518 UCSC:uc009nlw.1 InParanoid:Q7TSQ8 NextBio:394896
Bgee:Q7TSQ8 Genevestigator:Q7TSQ8 Uniprot:Q7TSQ8
Length = 878
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 84/335 (25%), Positives = 144/335 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + + L+ L D+ + G T N
Sbjct: 508 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDEALESLQYLFCNDL-DVPVGHIVHTGMLN 566
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-----DVSWHIHD 180
E GG +D I ++ +++ D+ + H A + + K DV+W
Sbjct: 567 EYGGYENDCSIARLTKRSFFMISPT---DQQV-HCWAWLNKYLPKDSNLLLEDVTW---- 618
Query: 181 ERSLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGF 235
+ + L L GP A VL L T D L+ E + NG+ ++ T +TGE GF
Sbjct: 619 KYTALNLIGPRAVDVLSELSYAPMTPDHFPTLFCKEMSVGYANGIRV-MSMT-HTGEPGF 676
Query: 236 EISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGL 294
+ +P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 677 MLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECG- 735
Query: 295 TWAIGKRR-RAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPI- 350
G+ R + E G F+G + +L+Q G R F + + G PI
Sbjct: 736 ----GESRVKLEKGIDFIGRDALLQQKQTGVYKRLAMFILDDHD--TDLDLWPWWGEPIY 789
Query: 351 ------GEITSGGFSPCLKKNIAMGYVKSGLHKAG 379
G+ TS +S L++++ +GYV + +G
Sbjct: 790 RNGKYAGKTTSSAYSYTLERHVCLGYVHNFSEDSG 824
>UNIPROTKB|F1S433 [details] [associations]
symbol:LOC100525224 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] InterPro:IPR006076 InterPro:IPR006222
Pfam:PF01266 Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
GeneTree:ENSGT00530000063120 EMBL:CU929739
Ensembl:ENSSSCT00000003015 OMA:PSLFTHK Uniprot:F1S433
Length = 537
Score = 163 (62.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 75/322 (23%), Positives = 135/322 (41%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 167 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDL-DVPVGHIVHTGMLN 225
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-----DVSWHIHD 180
E+GG +D I ++ +++ D+ + H A +K + + DV+W
Sbjct: 226 ESGGYENDCSIARLSKRSFFMISPT---DQQV-HCWAWLKKYMPEDSNLILEDVTW---- 277
Query: 181 ERSLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGF 235
+ + L L GP A VL L T D L+ E + NG+ ++ T +TGE GF
Sbjct: 278 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGF 335
Query: 236 EISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGL 294
+ +P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 336 MLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECGR 395
Query: 295 TWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQGNP 349
+ + + F+G +L+Q G R F + G
Sbjct: 396 ESRVKLDKGVD--FIGRAALLEQKQNGVYKRLTMFILDDHDTDLDLWPWWGEPIYRNGQY 453
Query: 350 IGEITSGGFSPCLKKNIAMGYV 371
+G+ TS + L++++ +G+V
Sbjct: 454 VGKTTSSAYGYTLERHVCLGFV 475
>UNIPROTKB|F1N4M3 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0006546 "glycine catabolic process" evidence=IEA]
[GO:0004047 "aminomethyltransferase activity" evidence=IEA]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005739 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 GeneTree:ENSGT00530000063120
IPI:IPI00708172 UniGene:Bt.65397 OMA:DWFDIVG EMBL:DAAA02045979
EMBL:DAAA02045976 EMBL:DAAA02045977 EMBL:DAAA02045978
Ensembl:ENSBTAT00000021895 Uniprot:F1N4M3
Length = 878
Score = 165 (63.1 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 78/325 (24%), Positives = 138/325 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 508 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDL-DVPVGHIVHTGMLN 566
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-----DVSWHIHD 180
E GG +D I ++ +++ D+ + H A +K + + DV+W
Sbjct: 567 ERGGYENDCSIARLSKRSFFMISPT---DQQV-HCWAWLKKYMPEDSNLILEDVTW---- 618
Query: 181 ERSLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGF 235
+ + L L GP A VL L T D L+ E + NG+ ++ T +TGE GF
Sbjct: 619 KYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGF 676
Query: 236 EISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGL 294
+ +P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 677 MLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECG- 735
Query: 295 TWAIGKRR-RAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQ 346
G+ R + + G F+G + +L+Q G R F +
Sbjct: 736 ----GESRVKLDKGVDFIGRDALLQQRQNGVYKRLTMFILDDHDTDLDLWPWWGEPIYRN 791
Query: 347 GNPIGEITSGGFSPCLKKNIAMGYV 371
G +G+ TS + L++++ +G+V
Sbjct: 792 GRYVGKTTSSAYGYTLERHVCLGFV 816
>UNIPROTKB|Q5SYV2 [details] [associations]
symbol:SARDH "Sarcosine dehydrogenase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006546 "glycine catabolic process" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AL365494
EMBL:AL590710 HGNC:HGNC:10536 HOVERGEN:HBG002326 IPI:IPI00514525
SMR:Q5SYV2 Ensembl:ENST00000371868 UCSC:uc004cen.3 Uniprot:Q5SYV2
Length = 368
Score = 154 (59.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 66/268 (24%), Positives = 112/268 (41%)
Query: 93 LKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDH--------- 143
L G D + L ADV+ PG+ T N GG+ D ++++ H
Sbjct: 9 LVGLDARKAADWLFSADVSR-PPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAF 67
Query: 144 ----IYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLAAPVLQHL 199
YL + + +HI ++ ++ + ++ ++++QGP + +LQ +
Sbjct: 68 EGDGYYLAMGGAVAQHNWSHITTVLQDQKSQCQLID--SSEDLGMISIQGPASRAILQEV 125
Query: 200 TKDDLSK--LYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEG 257
DLS F ++L G R + GE G+E+ +P V + +A++
Sbjct: 126 LDADLSNEAFPFSTHKLLRAAGHLVRAMRLSFVGELGWELHIPKASCVPVYRAVMAAG-A 184
Query: 258 KVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKIL 315
K L G R DSL +E G + D+ +P+EAGL + + ++ FLG E +
Sbjct: 185 KHGLINAGYRAIDSLSIEKGYRHWHADLRPDDSPLEAGLAFTC--KLKSPVPFLGREALE 242
Query: 316 KQLDEGPPVRRVGFFAGGPP-ARSHSKV 342
+Q G R V F P R H V
Sbjct: 243 QQRAAGLRRRLVCFTMEEPLWTRPHPAV 270
Score = 44 (20.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 347 GNPIGEITSGGFSPCLKKNIAMGYV 371
G +G + F + K IA GY+
Sbjct: 296 GQVVGHVRRADFGFAIDKTIAYGYI 320
Score = 39 (18.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 324 VRRVGFFAGGPPARSHSKVHDEQGNPIGE--ITSGGFS 359
VRR F ++ +HD G P+ + SG ++
Sbjct: 302 VRRADFGFAIDKTIAYGYIHDPSGGPVSLDFVKSGDYA 339
>TIGR_CMR|SPO_A0310 [details] [associations]
symbol:SPO_A0310 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
GO:GO:0016491 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:CP000032 GenomeReviews:CP000032_GR
HOGENOM:HOG000251716 ProtClustDB:CLSK863205 RefSeq:YP_165137.1
ProteinModelPortal:Q5LKS1 GeneID:3196699 KEGG:sil:SPOA0310
PATRIC:23381966 Uniprot:Q5LKS1
Length = 803
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 76/337 (22%), Positives = 139/337 (41%)
Query: 58 GWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGT 117
GW +++++ E+ R + D+ + G D L +L A+ G
Sbjct: 459 GWGHQSWHENALAEAQAT-RATAGVIDLCAFAQFEITGTDAGKLLNRLS-ANRIPHKDGR 516
Query: 118 GTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSW- 176
+L E G + I ++ ++ + + D A I++H++ G DV
Sbjct: 517 MSLNHLLTEKGRFETEITIWRINENRYFTGSPITRANPDFAWIKSHIRP----GEDVQMV 572
Query: 177 HIHDERSLLALQGPLAAPVLQHLTKDDLSKLYFGEF--RILDINGVSCFLTRTGYTGEDG 234
+ + +LA+ GP + +L LT DLS F + + + GV C+ R + GE G
Sbjct: 573 NRSADWGMLAMSGPASRRILSELTDADLSNAAFPWLSGQEITVAGVPCYALRVSFVGELG 632
Query: 235 FEISVPSERAVDLAKAILEKSEGKVRLTGLG--ARDSLRLEAGLCLYGNDMEQHVTPVEA 292
+E+ R +L A+ + LT LG A + +R+E G ++ + P +
Sbjct: 633 WELHALLNRIPELYDALFDVGSAH-GLTDLGSYAFNGMRMEKAYRASG-ELTTDIGPFDV 690
Query: 293 GLTWAIGKRRRAEGGFLGAEKILKQLDEGP----PVRRVGF-FAGGPPARSHSKVHDEQG 347
GL + R F+G E +L++ E ++ GG P ++
Sbjct: 691 GLERFVVTEGR---DFIGKEALLQRDPEWELFYAELQSDDIDIHGGEPVFFRDQI----- 742
Query: 348 NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKI 384
+G TSGG+ L K++ +V+ G +A V+I
Sbjct: 743 --VGLTTSGGYGYTLGKSLGWLFVRKGTPRADIAVRI 777
>TIGR_CMR|SPO_A0063 [details] [associations]
symbol:SPO_A0063 "FAD dependent
oxidoreductase/aminomethyl transferase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0004047 "aminomethyltransferase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0016491 "oxidoreductase activity" evidence=ISS] [GO:0050660
"flavin adenine dinucleotide binding" evidence=ISS]
InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571
GO:GO:0005737 GO:GO:0016491 GO:GO:0004047 GO:GO:0006546
InterPro:IPR013977 Pfam:PF08669 EMBL:CP000032
GenomeReviews:CP000032_GR HOGENOM:HOG000251716 KO:K00315
ProtClustDB:CLSK863205 RefSeq:YP_164894.1 ProteinModelPortal:Q5LLG4
GeneID:3196774 KEGG:sil:SPOA0063 PATRIC:23381430 OMA:PVASMEH
Uniprot:Q5LLG4
Length = 811
Score = 160 (61.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 78/344 (22%), Positives = 142/344 (41%)
Query: 69 IMESTLNCRQNG-SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNEN 127
++ + + QN L +V+ + + G FL+++ V A G L N +
Sbjct: 467 VVAAEVKAVQNSVGLAEVNGFNRIEITGSGRHAFLDRMFCGSVTKRAGRVG-LGYLLNHH 525
Query: 128 GGSIDDSVITKVK-DDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWH-IHDERSLL 185
G ++ I + D V G H + G DV + +++++L
Sbjct: 526 GMIKAEATIANLPASDRGPARVWYGSAAASEFHDMDWLSQHIQPGEDVQLRSLTNDQTIL 585
Query: 186 ALQGPLAAPVLQHLTKDDLSKLYFGEFRILD--INGVSCFLTRTGYTGEDGFEISVPSER 243
L GP A VL + D S+ F + + I + ++GE +EI +P+
Sbjct: 586 VLAGPRARAVLSACARGDWSREAFPWLSVRECFIGFAPATVMGVSFSGELAYEIHIPNA- 644
Query: 244 AVDLAKAILEKSEGKVRLTGLGAR--DSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR 301
++ A L K+ LT GAR +S+R+E G + D+ P E GL+ +
Sbjct: 645 SLYAAYLALRKAGEAHGLTLFGARAVESMRMEKGFLHWKADLITEFDPFETGLSRFV--- 701
Query: 302 RRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFS 359
+ +G F+G +L + +GP V PAR + + Q +G +TSG +
Sbjct: 702 KLDKGAFIGKPALLDRQSDGPRKMLVTLQIATDRAPARGGASLMVGQ-RVVGTVTSGDWG 760
Query: 360 PCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGN-ITKMPFVP 402
+ N+A +V L + G+++ +++ G I P+ P
Sbjct: 761 HRVGMNLAYAFVDPELAEPGSEMMLDLCGDMVAARVIAPSPYDP 804
Score = 47 (21.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 3 GGSLWQLGQSITRRLARADKKTIARRHFASDAENLKKTAL 42
GG W L Q I A D I R F A N++ TAL
Sbjct: 356 GGHGWLLAQMIVHGEACYDTWCIDPRRFTGHA-NVELTAL 394
>UNIPROTKB|O46504 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9913 "Bos taurus" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0004047 "aminomethyltransferase activity"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 EMBL:AF026954 GO:GO:0005759 GO:GO:0016491
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
eggNOG:COG0665 HOGENOM:HOG000251716 IPI:IPI00708172
RefSeq:NP_777206.1 UniGene:Bt.65397 ProteinModelPortal:O46504
STRING:O46504 PRIDE:O46504 GeneID:286844 KEGG:bta:286844 CTD:55066
HOVERGEN:HBG103854 InParanoid:O46504 OrthoDB:EOG4NZTSJ
NextBio:20806495 Uniprot:O46504
Length = 878
Score = 160 (61.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 77/325 (23%), Positives = 137/325 (42%)
Query: 69 IMESTLNC-RQNGSLFDVSHMCGLSLK--GKDCVPFLEKLVIADVAGLAPGTGTLTVFTN 125
I+ES + C ++ + D+S + G + L+ L D+ + G T N
Sbjct: 508 IVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEILQYLFSNDL-DVPVGHIVHTGMLN 566
Query: 126 ENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGG-----DVSWHIHD 180
E GG +D I ++ +++ D+ + H A +K + + DV+W
Sbjct: 567 ERGGYENDCSIARLSKRSFFMISPT---DQQV-HCWAWLKKYMPEDSNLILEDVTW---- 618
Query: 181 ERSLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGF 235
+ + L L GP VL L T D L+ E + NG+ ++ T +TGE GF
Sbjct: 619 KYTALNLIGPRTVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGF 676
Query: 236 EISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGL 294
+ +P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 677 MLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLNTLTTPLECG- 735
Query: 295 TWAIGKRR-RAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQ 346
G+ R + + G F+G + +L+Q G R F +
Sbjct: 736 ----GESRVKLDKGVDFIGRDALLQQRQNGVYNRLTMFILDDHDTDLDLWPWWGEPIYRN 791
Query: 347 GNPIGEITSGGFSPCLKKNIAMGYV 371
G +G+ TS + L++++ +G+V
Sbjct: 792 GRYVGKTTSSAYGYTLERHVCLGFV 816
>ZFIN|ZDB-GENE-040426-1220 [details] [associations]
symbol:ypel5 "yippee-like 5" species:7955 "Danio
rerio" [GO:0004047 "aminomethyltransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006546 "glycine
catabolic process" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
Pfam:PF03226 ZFIN:ZDB-GENE-040426-1220 GO:GO:0005737 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0404
InterPro:IPR004910 OrthoDB:EOG4NZTSJ EMBL:BC055193 IPI:IPI00494611
ProteinModelPortal:Q7SXY9 STRING:Q7SXY9 NextBio:20814486
Uniprot:Q7SXY9
Length = 424
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 63/266 (23%), Positives = 116/266 (43%)
Query: 121 TVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKG-GDVSWHIH 179
T N GG +D + ++ + +++ + + ++ HM S DVSW
Sbjct: 109 TGMLNARGGYENDCSVVRLSKNSFFIISPTDQQVHCWSWMKQHMPSDPQLHLEDVSW--- 165
Query: 180 DERSLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDG 234
+ + L L GP A VL L T + L+ E + NG+ ++ T +TGE G
Sbjct: 166 -KYTALNLIGPRAMDVLSELSYVSMTPEHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPG 222
Query: 235 FEISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAG 293
F + +P E A+ + ++ + +R G A SLR+E +G D++ TP+E G
Sbjct: 223 FMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDLDSFTTPLECG 282
Query: 294 LTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPI--- 350
+ + + + FLG +L+Q + G R + A + G PI
Sbjct: 283 REFRVKFDKDTD--FLGRAALLQQRELGVTRRFLMLVLEDHDAELD--LWPWWGEPIYRS 338
Query: 351 ----GEITSGGFSPCLKKNIAMGYVK 372
G +S +S L++++ +G+++
Sbjct: 339 GQLAGTTSSSAYSYTLQRHVCLGFIR 364
>WB|WBGene00021355 [details] [associations]
symbol:Y37E3.17 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006076 InterPro:IPR006222 Pfam:PF01266
Pfam:PF01571 GO:GO:0005737 GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 eggNOG:COG0665
GeneTree:ENSGT00530000063120 EMBL:FO081769 GeneID:171775
KEGG:cel:CELE_Y37E3.17 CTD:171775 RefSeq:NP_001021746.1
ProteinModelPortal:Q6AW03 SMR:Q6AW03 STRING:Q6AW03 PaxDb:Q6AW03
PRIDE:Q6AW03 EnsemblMetazoa:Y37E3.17b UCSC:Y37E3.17b
WormBase:Y37E3.17b HOGENOM:HOG000022206 InParanoid:Q6AW03
OMA:IWGKELT NextBio:872635 ArrayExpress:Q6AW03 Uniprot:Q6AW03
Length = 837
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 88/391 (22%), Positives = 166/391 (42%)
Query: 37 LKKTALHDFHVANGGKMVPFAGWSMPIQ---YKDSIMESTLNCRQNGSLFDVSHMCGLSL 93
LKK F NG ++ ++M +Q Y +++ + D+S + +
Sbjct: 461 LKKDGA-SFSFRNGWEVAN--SFNMGVQNEEYLPTLIREYEMVTNKCGVIDLSWKGKIEV 517
Query: 94 KGKDCVPFLEKLVIADVAGLAPGTGTLT--VFTNENGGSIDDSVITKV-KDDHIYLVVNA 150
KG D EKL+ +A P G ++ + +GG + +I + ++++
Sbjct: 518 KGNDA----EKLMDYAIASQIPALGKISSGLMLTRHGGILGPMMIFHHDRQRSAFILLTE 573
Query: 151 GCRD-KDLAHIEAHMKSFTAKGGDVSWHIHDER-SLLALQGPLAAPVLQHLTKDDLSKLY 208
R+ +DL + ++ K DV I E + LAL GP + VL LTK D+S
Sbjct: 574 PERESRDLYWLR---RAAAEKKFDVQVSIVSEYLASLALVGPKSREVLSALTKSDVSDEG 630
Query: 209 FGE--FRILDIN--GVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILE--KSEGKVRLT 262
F + R++ + GV C + T TG+ +E+ L A++ + G V
Sbjct: 631 FPQKSTRMIRLGPVGVVCARSSTS-TGQLSYELFHNRAETAKLYNAVMSAGREHGIVNF- 688
Query: 263 GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKIL--KQLDE 320
G A + +RLE G ++G ++ P E G+ + ++ F+G E L K+ D
Sbjct: 689 GQAALNMMRLEHGYKIWGKELTLDTNPFECGIGGLVDFEKKE---FIGRESALELKKKDF 745
Query: 321 GPPVRRVGFFAG-G--------PPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYV 371
+ + F G P ++ ++ +G+ITSG ++ L+K IA ++
Sbjct: 746 DRRLALITFDTEEGCVLDDRYVPSGNEVIRIDGKEAR-VGQITSGAYNVRLQKPIAFAWI 804
Query: 372 KSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 402
+ + K ++ +++ K + P +P
Sbjct: 805 DNAVGK-NERLVVDIGDKRLFATSLETPTIP 834
>UNIPROTKB|H3BUH3 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] InterPro:IPR006222 Pfam:PF01571 GO:GO:0005737
GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669
EMBL:AC009060 EMBL:AC009022 HGNC:HGNC:30264 Ensembl:ENST00000569042
Bgee:H3BUH3 Uniprot:H3BUH3
Length = 197
Score = 133 (51.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 53/199 (26%), Positives = 86/199 (43%)
Query: 183 SLLALQGPLAAPVLQHL-----TKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEI 237
S L L GP A VL L T D L+ E + NG+ ++ T +TGE GF +
Sbjct: 5 STLNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFML 62
Query: 238 SVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTW 296
+P E A+ + ++ + +R G A SLR+E +G D+ TP+E G
Sbjct: 63 YIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRE- 121
Query: 297 AIGKRRRAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQGNP 349
R + E G F+G + +L+Q G R F + + G
Sbjct: 122 ---SRVKLEKGMDFIGRDALLQQKQNGVYKRLTMFILDDHDSDLDLWPWWGEPIYRNGQY 178
Query: 350 IGEITSGGFSPCLKKNIAM 368
+G+ TS +S L++++ +
Sbjct: 179 VGKTTSSAYSYSLERHVCL 197
>UNIPROTKB|H3BV59 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005739 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:AC009060 EMBL:AC009022 HGNC:HGNC:30264
Ensembl:ENST00000563930 Bgee:H3BV59 Uniprot:H3BV59
Length = 149
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 199 LTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGK 258
+T D L+ E + NG+ ++ T +TGE GF + +P E A+ + ++ +
Sbjct: 1 MTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFMLYIPIEYALHVYNEVMSVGQKY 58
Query: 259 -VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG--FLGAEKIL 315
+R G A SLR+E +G D+ TP+E G R + E G F+G + +L
Sbjct: 59 GIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRE----SRVKLEKGMDFIGRDALL 114
Query: 316 KQLDEG 321
+Q G
Sbjct: 115 QQKQNG 120
>UNIPROTKB|B7ZAR9 [details] [associations]
symbol:PDPR "cDNA, FLJ79283, highly similar to Homo sapiens
pyruvate dehydrogenase phosphatase regulatory subunit (PDPR), mRNA"
species:9606 "Homo sapiens" [GO:0004047 "aminomethyltransferase
activity" evidence=IEA] [GO:0006546 "glycine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR006222 Pfam:PF01571 GO:GO:0005739 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 EMBL:AC009060
EMBL:AC009022 UniGene:Hs.461183 HGNC:HGNC:30264 IPI:IPI00872462
HOVERGEN:HBG106508 EMBL:AK316384 SMR:B7ZAR9 STRING:B7ZAR9
Ensembl:ENST00000567046 Uniprot:B7ZAR9
Length = 237
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 199 LTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGK 258
+T D L+ E + NG+ ++ T +TGE GF + +P E A+ + ++ +
Sbjct: 1 MTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFMLYIPIEYALHVYNEVMSVGQKY 58
Query: 259 -VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG--FLGAEKIL 315
+R G A SLR+E +G D+ TP+E G R + E G F+G + +L
Sbjct: 59 GIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRE----SRVKLEKGMDFIGRDALL 114
Query: 316 KQLDEGPPVRRVGFFAGGPPARSH-----SKVHDEQGNPIGEITSGGFSPCLKKNIAMGY 370
+Q G R F + + G +G+ TS +S L++++ +G+
Sbjct: 115 QQKQNGVYKRLTMFILDDHDSDLDLWPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGF 174
Query: 371 V 371
V
Sbjct: 175 V 175
>UNIPROTKB|H3BU60 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005739 GO:GO:0004047 GO:GO:0006546 EMBL:AC009060
EMBL:AC009022 HGNC:HGNC:30264 Ensembl:ENST00000567896 Bgee:H3BU60
Uniprot:H3BU60
Length = 100
Score = 105 (42.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 199 LTKDDLSKLYFGEFRILDINGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGK 258
+T D L+ E + NG+ ++ T +TGE GF + +P E A+ + ++ +
Sbjct: 1 MTPDHFPSLFCKEMSVGYANGIRV-MSMT-HTGEPGFMLYIPIEYALHVYNEVMSVGQKY 58
Query: 259 -VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAG 293
+R G A SLR+E +G D+ TP+E G
Sbjct: 59 GIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECG 94
>UNIPROTKB|B3KSE1 [details] [associations]
symbol:PDPR "Pyruvate dehydrogenase phosphatase regulatory
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0004047
"aminomethyltransferase activity" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006222 Pfam:PF01571
GO:GO:0005739 GO:GO:0004047 GO:GO:0006546 InterPro:IPR013977
Pfam:PF08669 EMBL:AC009060 EMBL:AC009022 UniGene:Hs.461183
HGNC:HGNC:30264 EMBL:AK093391 IPI:IPI00643433 SMR:B3KSE1
STRING:B3KSE1 Ensembl:ENST00000542659 UCSC:uc002eyh.2
HOVERGEN:HBG106508 Uniprot:B3KSE1
Length = 224
Score = 121 (47.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 218 NGVSCFLTRTGYTGEDGFEISVPSERAVDLAKAILEKSEGK-VRLTGLGARDSLRLEAGL 276
NG+ ++ T +TGE GF + +P E A+ + ++ + +R G A SLR+E
Sbjct: 7 NGIRV-MSMT-HTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFF 64
Query: 277 CLYGNDMEQHVTPVEAGLTWAIGKRRRAEGG--FLGAEKILKQLDEGPPVRRVGFFAGGP 334
+G D+ TP+E G R + E G F+G + +L+Q G R F
Sbjct: 65 AFWGQDINNLTTPLECGRE----SRVKLEKGMDFIGRDALLQQKQNGVYKRLTMFILDDH 120
Query: 335 PARSH-----SKVHDEQGNPIGEITSGGFSPCLKKNIAMGYV 371
+ + G +G+ TS +S L++++ +G+V
Sbjct: 121 DSDLDLWPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFV 162
>TIGR_CMR|SPO_0544 [details] [associations]
symbol:SPO_0544 "aminomethyl transferase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004047
"aminomethyltransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR006076
InterPro:IPR006222 Pfam:PF01266 Pfam:PF01571 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0004047
GO:GO:0006546 InterPro:IPR013977 Pfam:PF08669 HOGENOM:HOG000251716
KO:K00315 ProtClustDB:CLSK863205 RefSeq:YP_165805.1
ProteinModelPortal:Q5LW00 GeneID:3195841 KEGG:sil:SPO0544
PATRIC:23374353 OMA:GHIAPAD Uniprot:Q5LW00
Length = 811
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 76/336 (22%), Positives = 134/336 (39%)
Query: 76 CR--QNG-SLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSID 132
CR +N L D + + G + FL++ +A+ G TL +ENG
Sbjct: 475 CRAIRNAVGLIDFTSFAKWEVSGAGAMAFLDR-ALANAMPKRDGRVTLAHALDENGRFCA 533
Query: 133 DSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK---SFTAKGGDVSWHIHDERSLLALQG 189
+ + ++ +D Y+ A D + + ++ + T + W + G
Sbjct: 534 EFTVARLAEDRFYICGPAFSEVHDDHVLRSRLRPADAATLTNVSMGW------GCFTVAG 587
Query: 190 PLAAPVLQHLTKDDLSKLYFGEFRILDIN---GVSCFLTRTGYTGEDGFEISVPSERAVD 246
P + +L + L F F + + L R Y GE G+E+ P +
Sbjct: 588 PKSRELLSRIVDAPLENDSFKWFDLHEGEVGWATDVRLMRVNYCGELGWELHHP----IA 643
Query: 247 LAKAILEKSE--GK---VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKR 301
IL++ E G +R G+ A DSLR+E ++ T E GL I
Sbjct: 644 FQHHILDQLEQAGADLGLRHVGMRALDSLRIEKSYRAVAQELTTQNTLHELGLGRFIATG 703
Query: 302 RRAEGGFLGAEKILKQLDEGPP---VRRVGFFAGG-PPARSHS-KVHDEQGNPIGEITSG 356
+ GF+GA+ + +++ + V AGG PA + + + D+ I TSG
Sbjct: 704 KT---GFIGAQAVAERVGKESVKLVTLEVDCEAGGVEPAMNQAVRCGDKV---IALTTSG 757
Query: 357 GFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYD 392
+ L K++AM + GT++ +E+ + YD
Sbjct: 758 AYGHFLGKHLAMAILPLDHAAEGTRLSVEILDERYD 793
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 409 409 0.00079 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 103
No. of states in DFA: 613 (65 KB)
Total size of DFA: 253 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.83u 0.11s 31.94t Elapsed: 00:00:02
Total cpu time: 31.85u 0.11s 31.96t Elapsed: 00:00:02
Start: Fri May 10 17:44:27 2013 End: Fri May 10 17:44:29 2013
WARNINGS ISSUED: 1