Query 015317
Match_columns 409
No_of_seqs 145 out of 639
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 05:10:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015317.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015317hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05705 DUF829: Eukaryotic pr 100.0 1.8E-44 3.9E-49 343.9 23.1 233 21-263 1-240 (240)
2 KOG2521 Uncharacterized conser 100.0 3.7E-39 7.9E-44 321.6 14.2 312 1-328 1-350 (350)
3 PRK13604 luxD acyl transferase 99.3 3.7E-11 8.1E-16 119.3 16.1 234 19-297 37-283 (307)
4 PF00326 Peptidase_S9: Prolyl 99.2 6.2E-10 1.3E-14 103.6 17.0 191 38-268 5-211 (213)
5 PRK05077 frsA fermentation/res 99.2 4.2E-09 9E-14 109.1 22.7 221 8-266 184-412 (414)
6 TIGR01250 pro_imino_pep_2 prol 99.2 1.2E-08 2.5E-13 95.8 23.8 234 4-264 10-288 (288)
7 PLN02298 hydrolase, alpha/beta 99.2 3.9E-09 8.6E-14 104.6 21.2 65 199-265 249-316 (330)
8 PHA02857 monoglyceride lipase; 99.1 7.5E-09 1.6E-13 99.4 20.5 224 19-266 24-273 (276)
9 PF12695 Abhydrolase_5: Alpha/ 99.1 2.8E-09 6E-14 91.7 15.4 145 21-245 1-145 (145)
10 PRK10566 esterase; Provisional 99.1 2E-08 4.4E-13 94.9 22.3 204 19-266 27-248 (249)
11 PRK10749 lysophospholipase L2; 99.1 2.7E-08 5.9E-13 99.2 24.0 68 198-265 256-328 (330)
12 PLN02385 hydrolase; alpha/beta 99.1 2.5E-08 5.4E-13 100.1 22.4 235 9-266 78-345 (349)
13 TIGR03343 biphenyl_bphD 2-hydr 99.1 2E-08 4.3E-13 96.1 19.8 61 199-264 221-281 (282)
14 PLN02652 hydrolase; alpha/beta 99.0 3.4E-08 7.4E-13 101.7 22.6 225 19-266 136-387 (395)
15 TIGR03611 RutD pyrimidine util 99.0 2E-08 4.3E-13 93.0 18.9 61 199-264 196-256 (257)
16 COG1647 Esterase/lipase [Gener 99.0 1.3E-08 2.8E-13 96.1 15.9 218 19-265 15-243 (243)
17 TIGR02427 protocat_pcaD 3-oxoa 99.0 6E-08 1.3E-12 88.7 19.3 61 199-264 191-251 (251)
18 PRK14875 acetoin dehydrogenase 99.0 3.6E-08 7.8E-13 98.4 19.0 208 19-265 131-370 (371)
19 PLN03087 BODYGUARD 1 domain co 99.0 1.2E-07 2.6E-12 100.1 23.6 64 199-266 416-479 (481)
20 PF12697 Abhydrolase_6: Alpha/ 98.9 1.3E-07 2.8E-12 84.7 19.6 206 22-258 1-228 (228)
21 TIGR02240 PHA_depoly_arom poly 98.9 8.5E-08 1.8E-12 92.5 19.2 64 199-268 205-268 (276)
22 TIGR01738 bioH putative pimelo 98.9 6E-08 1.3E-12 88.5 17.2 60 199-263 186-245 (245)
23 PLN02824 hydrolase, alpha/beta 98.9 1.6E-07 3.5E-12 91.2 20.1 62 199-265 232-293 (294)
24 PRK11460 putative hydrolase; P 98.9 3.7E-07 8.1E-12 87.1 22.0 64 201-269 148-211 (232)
25 KOG4391 Predicted alpha/beta h 98.9 1.7E-08 3.8E-13 95.1 12.3 212 8-269 69-285 (300)
26 PRK11126 2-succinyl-6-hydroxy- 98.9 3.3E-07 7.1E-12 85.7 19.7 211 19-265 2-241 (242)
27 TIGR03695 menH_SHCHC 2-succiny 98.8 3.1E-07 6.7E-12 83.5 18.4 60 199-264 192-251 (251)
28 PLN02511 hydrolase 98.8 1.2E-07 2.5E-12 97.3 16.5 223 19-268 100-367 (388)
29 PRK10673 acyl-CoA esterase; Pr 98.8 6.5E-07 1.4E-11 84.2 20.3 220 19-265 16-254 (255)
30 TIGR03056 bchO_mg_che_rel puta 98.8 9.1E-07 2E-11 83.7 21.3 61 199-264 218-278 (278)
31 PRK06489 hypothetical protein; 98.8 3.3E-07 7.1E-12 92.6 19.3 63 199-267 290-358 (360)
32 PRK00870 haloalkane dehalogena 98.8 4.8E-07 1E-11 88.5 19.4 64 199-265 237-300 (302)
33 COG1506 DAP2 Dipeptidyl aminop 98.8 1.8E-07 3.9E-12 101.6 17.7 222 8-268 379-618 (620)
34 PRK03592 haloalkane dehalogena 98.8 7.4E-07 1.6E-11 86.6 20.3 66 199-268 226-291 (295)
35 PLN02965 Probable pheophorbida 98.8 1.1E-06 2.3E-11 83.9 20.9 63 199-266 191-253 (255)
36 PRK10349 carboxylesterase BioH 98.8 3.1E-07 6.6E-12 87.2 16.3 62 199-265 194-255 (256)
37 PRK10985 putative hydrolase; P 98.7 1.1E-06 2.4E-11 87.6 20.3 219 19-265 58-319 (324)
38 PF01738 DLH: Dienelactone hyd 98.7 3.1E-07 6.7E-12 85.9 14.6 165 19-252 14-196 (218)
39 TIGR03100 hydr1_PEP hydrolase, 98.7 2.8E-06 6E-11 82.8 20.9 223 19-265 26-274 (274)
40 PRK08775 homoserine O-acetyltr 98.7 1.1E-06 2.4E-11 88.0 18.4 65 199-267 275-340 (343)
41 PLN02679 hydrolase, alpha/beta 98.7 3.2E-06 6.9E-11 85.6 21.7 67 199-266 290-357 (360)
42 TIGR01249 pro_imino_pep_1 prol 98.7 2.9E-06 6.3E-11 83.5 20.7 57 201-265 248-304 (306)
43 PRK11071 esterase YqiA; Provis 98.7 2.5E-06 5.4E-11 79.1 18.7 184 20-264 2-189 (190)
44 PRK03204 haloalkane dehalogena 98.7 3.4E-06 7.4E-11 82.4 20.3 58 201-263 227-285 (286)
45 PLN02894 hydrolase, alpha/beta 98.6 6.4E-06 1.4E-10 85.0 22.5 69 199-272 323-391 (402)
46 TIGR01836 PHA_synth_III_C poly 98.6 2.5E-06 5.4E-11 85.9 18.2 64 199-265 284-349 (350)
47 COG2267 PldB Lysophospholipase 98.6 5.9E-06 1.3E-10 82.1 20.2 226 20-268 35-296 (298)
48 TIGR01607 PST-A Plasmodium sub 98.6 6.4E-06 1.4E-10 82.7 20.3 62 201-264 270-331 (332)
49 COG0429 Predicted hydrolase of 98.6 8.3E-06 1.8E-10 81.5 20.2 233 8-266 64-340 (345)
50 PLN02211 methyl indole-3-aceta 98.6 4.4E-06 9.6E-11 81.4 18.2 60 201-266 211-270 (273)
51 PF02230 Abhydrolase_2: Phosph 98.6 3.4E-06 7.3E-11 79.2 16.8 61 201-266 155-215 (216)
52 TIGR02821 fghA_ester_D S-formy 98.6 1.1E-05 2.4E-10 78.7 20.6 45 201-245 211-256 (275)
53 PLN02578 hydrolase 98.5 1.5E-05 3.2E-10 80.5 22.0 60 199-264 294-353 (354)
54 PLN02980 2-oxoglutarate decarb 98.5 9.2E-06 2E-10 97.1 23.5 67 199-267 1566-1640(1655)
55 PLN02442 S-formylglutathione h 98.5 1.3E-05 2.8E-10 78.7 19.8 63 199-271 215-278 (283)
56 PRK10162 acetyl esterase; Prov 98.5 2.8E-05 6E-10 77.6 21.9 206 19-249 81-294 (318)
57 KOG2382 Predicted alpha/beta h 98.5 6.1E-06 1.3E-10 82.2 16.2 225 19-266 52-313 (315)
58 PRK00175 metX homoserine O-ace 98.4 3.5E-05 7.6E-10 78.7 21.8 68 199-267 307-375 (379)
59 PRK05855 short chain dehydroge 98.4 1.8E-05 3.9E-10 83.6 19.2 63 200-268 232-294 (582)
60 TIGR01392 homoserO_Ac_trn homo 98.4 1.8E-05 3.8E-10 79.7 18.2 65 199-264 286-351 (351)
61 PRK07581 hypothetical protein; 98.4 2.7E-05 5.9E-10 77.5 19.3 65 199-268 273-338 (339)
62 COG0412 Dienelactone hydrolase 98.3 2.9E-05 6.2E-10 74.7 17.4 170 8-247 16-204 (236)
63 KOG1552 Predicted alpha/beta h 98.3 8.8E-06 1.9E-10 78.7 13.7 184 22-266 61-252 (258)
64 KOG1838 Alpha/beta hydrolase [ 98.3 6E-05 1.3E-09 77.5 19.2 218 19-269 125-391 (409)
65 KOG1455 Lysophospholipase [Lip 98.3 9.6E-05 2.1E-09 73.1 19.0 65 199-265 244-311 (313)
66 PLN03084 alpha/beta hydrolase 98.2 0.00046 1E-08 71.0 23.2 61 199-265 323-383 (383)
67 PF07859 Abhydrolase_3: alpha/ 98.1 4.4E-05 9.4E-10 70.4 13.4 200 23-248 2-211 (211)
68 PLN02872 triacylglycerol lipas 98.1 0.00012 2.7E-09 75.6 17.5 66 201-269 325-392 (395)
69 COG0400 Predicted esterase [Ge 98.1 0.00019 4E-09 68.0 17.0 61 200-266 145-205 (207)
70 KOG1454 Predicted hydrolase/ac 98.1 8.1E-05 1.8E-09 75.0 15.3 62 201-267 264-325 (326)
71 TIGR01840 esterase_phb esteras 98.1 0.00018 3.9E-09 67.2 16.4 85 19-103 13-112 (212)
72 TIGR01838 PHA_synth_I poly(R)- 98.1 0.00016 3.5E-09 77.4 17.7 51 199-253 413-463 (532)
73 PRK05371 x-prolyl-dipeptidyl a 98.1 0.00029 6.2E-09 78.7 20.1 207 36-267 268-520 (767)
74 PF00561 Abhydrolase_1: alpha/ 98.0 0.00016 3.4E-09 66.0 13.6 58 198-260 172-229 (230)
75 COG0596 MhpC Predicted hydrola 97.9 0.0012 2.6E-08 58.9 18.5 62 199-264 219-280 (282)
76 PF06500 DUF1100: Alpha/beta h 97.9 0.00013 2.8E-09 75.5 12.1 188 17-243 187-390 (411)
77 PRK10115 protease 2; Provision 97.8 0.00077 1.7E-08 74.4 18.4 208 19-265 445-674 (686)
78 PRK06765 homoserine O-acetyltr 97.8 0.0006 1.3E-08 70.4 16.3 66 199-265 321-387 (389)
79 PRK07868 acyl-CoA synthetase; 97.8 0.0008 1.7E-08 77.2 17.4 64 199-266 295-361 (994)
80 COG3545 Predicted esterase of 97.7 0.0016 3.5E-08 59.9 15.5 157 20-251 3-159 (181)
81 PF03583 LIP: Secretory lipase 97.6 0.0029 6.2E-08 62.7 17.0 55 200-254 218-273 (290)
82 TIGR03101 hydr2_PEP hydrolase, 97.6 0.0055 1.2E-07 60.2 18.6 201 19-241 25-242 (266)
83 COG0657 Aes Esterase/lipase [L 97.3 0.027 5.9E-07 55.6 18.8 210 7-246 67-288 (312)
84 PF08840 BAAT_C: BAAT / Acyl-C 97.2 0.00042 9.1E-09 65.5 4.6 152 71-245 7-162 (213)
85 PF05448 AXE1: Acetyl xylan es 97.2 0.028 6E-07 56.7 17.7 69 190-265 251-319 (320)
86 PF06821 Ser_hydrolase: Serine 97.1 0.0045 9.9E-08 56.7 10.9 169 22-264 1-170 (171)
87 PF10503 Esterase_phd: Esteras 97.1 0.016 3.5E-07 55.4 14.5 168 19-230 15-198 (220)
88 KOG4409 Predicted hydrolase/ac 97.0 0.11 2.3E-06 52.9 20.1 62 200-265 302-363 (365)
89 cd00707 Pancreat_lipase_like P 96.9 0.0063 1.4E-07 59.8 10.4 84 19-102 36-128 (275)
90 TIGR01839 PHA_synth_II poly(R) 96.8 0.036 7.9E-07 59.7 15.7 52 198-253 438-489 (560)
91 PLN00021 chlorophyllase 96.7 0.13 2.7E-06 51.7 18.2 198 19-272 52-281 (313)
92 COG2945 Predicted hydrolase of 96.7 0.049 1.1E-06 51.1 13.5 167 19-264 27-205 (210)
93 PF09752 DUF2048: Uncharacteri 96.7 0.078 1.7E-06 54.0 15.9 59 202-265 290-348 (348)
94 KOG3043 Predicted hydrolase re 96.6 0.065 1.4E-06 51.4 14.3 153 19-245 39-209 (242)
95 TIGR01849 PHB_depoly_PhaZ poly 96.2 0.3 6.5E-06 50.9 17.7 67 199-265 335-405 (406)
96 PF08538 DUF1749: Protein of u 96.2 0.056 1.2E-06 54.1 11.4 109 19-140 32-150 (303)
97 PF03959 FSH1: Serine hydrolas 96.0 0.093 2E-06 49.3 11.7 42 199-244 159-200 (212)
98 TIGR03230 lipo_lipase lipoprot 95.8 0.085 1.9E-06 55.5 11.5 84 19-102 41-135 (442)
99 KOG4627 Kynurenine formamidase 95.5 0.1 2.2E-06 49.7 9.5 201 3-255 51-261 (270)
100 COG1073 Hydrolases of the alph 95.5 0.033 7.1E-07 52.6 6.5 63 202-266 233-297 (299)
101 COG4099 Predicted peptidase [G 95.3 0.12 2.5E-06 51.7 9.7 40 201-240 315-354 (387)
102 KOG4178 Soluble epoxide hydrol 95.3 3.3 7.2E-05 41.9 20.0 65 199-266 256-320 (322)
103 COG3208 GrsT Predicted thioest 95.2 1.5 3.3E-05 42.6 16.8 212 19-264 6-234 (244)
104 KOG2100 Dipeptidyl aminopeptid 95.1 0.33 7.1E-06 54.5 13.9 69 201-269 681-750 (755)
105 KOG2281 Dipeptidyl aminopeptid 95.0 0.55 1.2E-05 51.2 14.3 65 201-265 802-866 (867)
106 PF12715 Abhydrolase_7: Abhydr 95.0 0.044 9.5E-07 56.4 5.8 173 19-228 115-331 (390)
107 TIGR00976 /NonD putative hydro 94.9 0.14 3.1E-06 55.0 9.8 105 19-141 22-135 (550)
108 PF05677 DUF818: Chlamydia CHL 94.5 0.85 1.8E-05 46.5 13.4 110 19-141 137-258 (365)
109 PF02129 Peptidase_S15: X-Pro 94.4 1.4 3.1E-05 42.6 14.7 81 43-141 53-139 (272)
110 PF06028 DUF915: Alpha/beta hy 94.3 0.52 1.1E-05 46.1 11.4 65 198-263 181-252 (255)
111 COG3509 LpqC Poly(3-hydroxybut 94.2 0.25 5.5E-06 49.2 8.9 97 3-99 43-157 (312)
112 COG3243 PhaC Poly(3-hydroxyalk 94.1 1.1 2.3E-05 46.9 13.6 65 198-266 327-399 (445)
113 KOG2551 Phospholipase/carboxyh 94.1 0.17 3.6E-06 48.5 7.2 65 199-271 161-225 (230)
114 KOG2112 Lysophospholipase [Lip 94.0 0.41 8.9E-06 45.3 9.5 60 201-265 144-203 (206)
115 PF05990 DUF900: Alpha/beta hy 94.0 0.48 1E-05 45.5 10.3 90 19-108 18-115 (233)
116 KOG4667 Predicted esterase [Li 93.7 2.3 4.9E-05 41.0 13.9 59 198-262 196-254 (269)
117 PF05728 UPF0227: Uncharacteri 93.7 6 0.00013 36.8 17.7 54 200-263 133-186 (187)
118 PF00151 Lipase: Lipase; Inte 93.1 0.27 5.9E-06 49.8 7.3 81 19-99 71-163 (331)
119 PF05057 DUF676: Putative seri 92.5 0.95 2.1E-05 42.8 9.7 86 20-106 5-98 (217)
120 PRK10439 enterobactin/ferric e 92.2 4.5 9.7E-05 42.2 15.1 41 203-245 350-391 (411)
121 PF06342 DUF1057: Alpha/beta h 92.1 7.4 0.00016 38.9 15.5 176 21-228 37-239 (297)
122 PF00975 Thioesterase: Thioest 91.8 10 0.00023 34.8 18.4 100 20-139 1-106 (229)
123 KOG2984 Predicted hydrolase [G 91.7 0.2 4.3E-06 47.7 3.9 63 198-265 213-275 (277)
124 PF10230 DUF2305: Uncharacteri 91.4 15 0.00032 35.9 19.5 44 201-245 221-264 (266)
125 COG4757 Predicted alpha/beta h 91.3 2.9 6.3E-05 40.7 11.4 219 19-264 29-278 (281)
126 PF02273 Acyl_transf_2: Acyl t 91.1 3.6 7.7E-05 40.4 11.8 238 8-295 16-274 (294)
127 PF08386 Abhydrolase_4: TAP-li 91.0 0.59 1.3E-05 39.1 5.8 60 201-265 34-93 (103)
128 KOG1515 Arylacetamide deacetyl 90.6 15 0.00032 37.5 16.5 48 203-252 270-317 (336)
129 KOG1553 Predicted alpha/beta h 89.1 0.92 2E-05 46.3 6.3 54 69-140 294-347 (517)
130 KOG2564 Predicted acetyltransf 89.0 5.3 0.00011 40.0 11.3 86 20-105 74-165 (343)
131 PF01674 Lipase_2: Lipase (cla 88.0 1.8 3.9E-05 41.4 7.3 81 19-103 1-92 (219)
132 COG3458 Acetyl esterase (deace 87.7 3.1 6.8E-05 41.3 8.8 46 198-246 256-301 (321)
133 PF07819 PGAP1: PGAP1-like pro 86.2 8.5 0.00018 36.7 10.9 106 19-139 4-124 (225)
134 TIGR03502 lipase_Pla1_cef extr 86.2 4.5 9.7E-05 45.7 10.1 36 20-56 450-485 (792)
135 PF12740 Chlorophyllase2: Chlo 84.3 11 0.00023 37.2 10.6 104 20-139 18-131 (259)
136 COG4782 Uncharacterized protei 82.0 9.8 0.00021 39.2 9.6 109 20-139 117-235 (377)
137 PF00756 Esterase: Putative es 79.4 3.3 7.2E-05 38.9 5.1 38 69-106 98-135 (251)
138 COG1505 Serine proteases of th 77.3 18 0.00038 39.7 10.2 65 203-267 582-647 (648)
139 PF10340 DUF2424: Protein of u 75.7 1.1E+02 0.0023 31.9 18.9 218 7-247 106-351 (374)
140 PRK04940 hypothetical protein; 75.1 72 0.0016 29.7 16.0 54 203-265 126-179 (180)
141 PF06057 VirJ: Bacterial virul 68.1 28 0.0006 32.8 8.0 95 21-135 3-104 (192)
142 PF07224 Chlorophyllase: Chlor 64.3 31 0.00067 34.4 7.8 79 20-102 47-136 (307)
143 TIGR03712 acc_sec_asp2 accesso 63.8 1.4E+02 0.0031 32.2 13.1 190 19-239 288-481 (511)
144 PF11144 DUF2920: Protein of u 63.5 12 0.00027 39.0 5.2 39 203-241 295-333 (403)
145 PF02089 Palm_thioest: Palmito 61.3 49 0.0011 32.9 8.8 102 18-138 4-116 (279)
146 COG3571 Predicted hydrolase of 57.0 1.7E+02 0.0037 27.3 13.6 142 34-244 30-180 (213)
147 PF02450 LCAT: Lecithin:choles 56.3 58 0.0013 33.6 8.8 92 35-139 66-161 (389)
148 KOG3253 Predicted alpha/beta h 56.2 22 0.00047 39.1 5.7 49 199-250 302-350 (784)
149 COG1075 LipA Predicted acetylt 55.6 20 0.00043 36.3 5.1 103 19-141 59-167 (336)
150 PF11187 DUF2974: Protein of u 53.3 30 0.00066 33.1 5.7 56 69-141 70-126 (224)
151 cd00741 Lipase Lipase. Lipase 52.7 59 0.0013 28.3 7.1 42 85-138 27-68 (153)
152 PRK10252 entF enterobactin syn 51.8 76 0.0017 37.4 9.9 76 19-100 1068-1147(1296)
153 COG4188 Predicted dienelactone 51.3 77 0.0017 32.8 8.5 84 19-103 70-176 (365)
154 KOG1551 Uncharacterized conser 51.1 22 0.00047 35.5 4.3 59 204-267 309-367 (371)
155 PF01764 Lipase_3: Lipase (cla 49.2 54 0.0012 27.7 6.2 53 74-138 54-106 (140)
156 COG3319 Thioesterase domains o 48.4 1.8E+02 0.0039 28.5 10.3 99 20-138 1-104 (257)
157 PF05705 DUF829: Eukaryotic pr 47.5 12 0.00025 35.4 1.9 158 203-376 67-240 (240)
158 COG4814 Uncharacterized protei 47.4 99 0.0021 30.7 8.1 65 198-264 213-285 (288)
159 PF12048 DUF3530: Protein of u 46.6 1.3E+02 0.0029 30.0 9.4 38 20-57 88-127 (310)
160 KOG0780 Signal recognition par 45.5 1.7E+02 0.0037 30.9 9.9 39 19-57 100-139 (483)
161 PF12146 Hydrolase_4: Putative 43.9 68 0.0015 25.4 5.5 38 20-58 17-54 (79)
162 COG0552 FtsY Signal recognitio 42.4 1.7E+02 0.0038 29.9 9.3 92 20-140 139-233 (340)
163 COG2021 MET2 Homoserine acetyl 42.3 68 0.0015 33.2 6.5 63 199-265 304-367 (368)
164 cd00312 Esterase_lipase Estera 41.8 56 0.0012 34.2 6.1 31 72-102 159-192 (493)
165 PF11288 DUF3089: Protein of u 40.9 37 0.0008 32.3 4.1 32 75-111 85-116 (207)
166 COG2936 Predicted acyl esteras 37.9 65 0.0014 35.2 5.9 81 42-141 75-162 (563)
167 cd03465 URO-D_like The URO-D _ 35.8 1.1E+02 0.0024 30.1 6.9 63 35-97 169-233 (330)
168 cd00465 URO-D_CIMS_like The UR 35.5 1.4E+02 0.0029 29.2 7.4 60 34-93 144-207 (306)
169 PF04273 DUF442: Putative phos 35.4 1.5E+02 0.0033 25.2 6.6 33 74-106 75-107 (110)
170 cd00519 Lipase_3 Lipase (class 35.1 1.1E+02 0.0024 28.5 6.4 42 85-138 127-168 (229)
171 PF11339 DUF3141: Protein of u 34.5 47 0.001 36.0 4.0 53 198-250 294-353 (581)
172 PF01208 URO-D: Uroporphyrinog 34.2 70 0.0015 31.9 5.2 63 34-96 182-245 (343)
173 PLN02324 triacylglycerol lipas 34.1 61 0.0013 34.1 4.8 35 74-108 203-237 (415)
174 TIGR01463 mtaA_cmuA methyltran 33.8 1.4E+02 0.0031 29.8 7.3 62 35-96 181-244 (340)
175 PF09497 Med12: Transcription 33.7 14 0.0003 28.7 0.0 20 355-374 36-55 (64)
176 PLN02606 palmitoyl-protein thi 33.0 4.8E+02 0.01 26.4 10.7 84 18-106 25-114 (306)
177 PLN02454 triacylglycerol lipas 32.8 90 0.002 32.9 5.8 35 74-108 216-250 (414)
178 KOG2029 Uncharacterized conser 30.9 1.2E+02 0.0025 33.6 6.3 50 85-140 525-574 (697)
179 KOG2624 Triglyceride lipase-ch 30.0 1.2E+02 0.0026 31.9 6.1 47 199-246 330-376 (403)
180 TIGR01464 hemE uroporphyrinoge 29.3 3.2E+02 0.0069 27.3 9.0 49 35-83 181-229 (338)
181 PLN02733 phosphatidylcholine-s 28.0 2.1E+02 0.0046 30.3 7.7 94 33-140 107-203 (440)
182 PF00326 Peptidase_S9: Prolyl 27.7 2.7E+02 0.0059 25.2 7.7 64 19-82 144-211 (213)
183 PF04084 ORC2: Origin recognit 27.6 2.2E+02 0.0049 28.8 7.5 32 23-55 57-90 (326)
184 PRK06252 methylcobalamin:coenz 27.4 2.1E+02 0.0045 28.5 7.3 57 35-93 181-239 (339)
185 PRK00115 hemE uroporphyrinogen 26.7 3.8E+02 0.0083 26.9 9.1 49 35-83 187-235 (346)
186 PLN02408 phospholipase A1 26.5 2.2E+02 0.0047 29.6 7.2 34 74-107 188-221 (365)
187 COG4635 HemG Flavodoxin [Energ 26.0 1.9E+02 0.0041 26.8 5.9 71 203-274 2-81 (175)
188 cd00717 URO-D Uroporphyrinogen 25.5 1.9E+02 0.0042 28.8 6.7 49 35-83 178-226 (335)
189 PLN02433 uroporphyrinogen deca 25.4 2.1E+02 0.0045 28.9 6.9 58 35-92 180-239 (345)
190 PF07519 Tannase: Tannase and 25.3 1.2E+02 0.0025 32.4 5.2 65 201-265 353-426 (474)
191 PLN02571 triacylglycerol lipas 25.1 1.5E+02 0.0032 31.3 5.8 33 75-107 215-247 (413)
192 KOG2541 Palmitoyl protein thio 23.7 5.5E+02 0.012 25.8 9.0 100 19-138 23-128 (296)
193 cd00019 AP2Ec AP endonuclease 23.3 5.1E+02 0.011 24.8 9.0 63 34-96 85-147 (279)
194 KOG3975 Uncharacterized conser 23.3 6.8E+02 0.015 25.0 9.5 56 202-261 243-298 (301)
195 cd03174 DRE_TIM_metallolyase D 22.5 6.1E+02 0.013 23.8 9.3 75 21-102 130-207 (265)
196 PF08357 SEFIR: SEFIR domain; 21.9 89 0.0019 27.1 3.0 53 203-259 2-55 (150)
197 cd03307 Mta_CmuA_like MtaA_Cmu 21.8 3E+02 0.0065 27.3 7.1 55 36-92 173-229 (326)
198 COG0541 Ffh Signal recognition 21.2 3.1E+02 0.0068 29.2 7.2 39 19-57 99-138 (451)
199 PRK10391 oriC-binding nucleoid 21.1 25 0.00054 27.7 -0.6 11 363-373 55-66 (71)
200 KOG4569 Predicted lipase [Lipi 20.9 1.3E+02 0.0029 30.4 4.4 35 72-108 159-193 (336)
201 PF03193 DUF258: Protein of un 20.3 2.4E+02 0.0053 25.6 5.6 52 37-103 2-53 (161)
No 1
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=100.00 E-value=1.8e-44 Score=343.85 Aligned_cols=233 Identities=24% Similarity=0.363 Sum_probs=166.5
Q ss_pred cEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCchhhhH-HHHHHHHHHHHHhcCCCCcEEEEEccCcHHH
Q 015317 21 GIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAES-LALDVLKELVEELKFGPCPVVFASFSGGPKA 99 (409)
Q Consensus 21 plVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~-~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~ 99 (409)
|||||+|||||+++|++||+++|++.|+++|++.+++.++++|.+... .+..+++.+.+..+....+|+||+|||||+.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~ 80 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSF 80 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHH
Confidence 799999999999999999999999999999999999999999975443 4445555554433333348999999999987
Q ss_pred HHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhH--HHHHHHHHHH-hHh
Q 015317 100 CMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRL--VSRIANGIAS-GLD 176 (409)
Q Consensus 100 ~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~l--v~~~~~~i~~-~l~ 176 (409)
.+..++++++.. +++..+.++|+|+||||||+..+.. +...++..++++... ..+ ...+...++. ...
T Consensus 81 ~~~~l~~~~~~~-------~~~~~~~~~i~g~I~DS~P~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (240)
T PF05705_consen 81 LYSQLLEAYQSR-------KKFGKLLPRIKGIIFDSCPGIPTYS-SSARAFSAALPKSSP-RWFVPLWPLLQFLLRLSII 151 (240)
T ss_pred HHHHHHHHHHhc-------ccccccccccceeEEeCCCCccccc-cHHHHHHHHcCccch-hhHHHHHHHHHHHHHHHHH
Confidence 677677666543 3456677789999999999988752 222223333332210 101 1111111111 111
Q ss_pred HHhhhhccc---hhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH
Q 015317 177 AFFLNRFES---HRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI 253 (409)
Q Consensus 177 ~l~~~~f~~---~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe 253 (409)
..+...... ....+++.+.. .+.++|+|||||++|.+||+++||+|+++++++|.+|+.++|++|+||+|+|+||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~ 230 (240)
T PF05705_consen 152 SYFIFGYPDVQEYYRRALNDFAN-SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPD 230 (240)
T ss_pred HHHHhcCCcHHHHHHHHHhhhhc-CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHH
Confidence 111111111 11222333332 35568999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 015317 254 DYKAAVTELL 263 (409)
Q Consensus 254 eY~~aV~~Fl 263 (409)
+||++|.+||
T Consensus 231 ~Y~~~v~~fw 240 (240)
T PF05705_consen 231 RYWRAVDEFW 240 (240)
T ss_pred HHHHHHHhhC
Confidence 9999999997
No 2
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=3.7e-39 Score=321.60 Aligned_cols=312 Identities=25% Similarity=0.379 Sum_probs=232.5
Q ss_pred CCCC---CceeeeeccCC----------------CCCCCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccccccc
Q 015317 1 MWGF---GGRYYWGRKER----------------GGRREGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMF 61 (409)
Q Consensus 1 ~~~~---~~~~~~~~~~~----------------~~~~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~ 61 (409)
||+. +++.+|++|-. .++.+|||+++||+|+.++++.||+++|++.|+.++.++.+...++
T Consensus 1 ~Iq~~~~~~~~~~~~k~s~~~~~~~~~~~~~~~g~~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~ 80 (350)
T KOG2521|consen 1 IIQIRFHARRPVWTAKVSLEFSDIGNAAASKVNGGESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVF 80 (350)
T ss_pred CcccccccCcccceeeccHhhhhccccchhhhcCCCccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccc
Confidence 4665 77899998821 2235699999999999999999999999999999999999998888
Q ss_pred Cchhh----hHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHH-HHHHhhhhhccccccchhccccCceEEEecCC
Q 015317 62 FPEKA----ESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKV-LQITEGICEAKLSLDDRQLVRDCFSGQIYDSS 136 (409)
Q Consensus 62 ~p~~~----~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l-~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~ 136 (409)
++.+. +.++...|.+|+++.+..++||+||.|||||...|+.+ ++..+.. ....+...|+||||+
T Consensus 81 ~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~----------~~~~~~~~~~~fdS~ 150 (350)
T KOG2521|consen 81 LSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHE----------PKAAQLSGGIIFDSA 150 (350)
T ss_pred cccccccchhhHHHHHHHHHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcC----------chhHhhcCCceEecc
Confidence 87664 35676778889988887789999999999999888887 5654321 223456778999999
Q ss_pred CCCccchhhhhhhhccccccCCCChhHHHHHHHHH-------------HHhHhHHhhhhccchhhHHHHHhhc-cCCCCC
Q 015317 137 PVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGI-------------ASGLDAFFLNRFESHRAEYWQTLYS-SVRFGA 202 (409)
Q Consensus 137 P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i-------------~~~l~~l~~~~f~~~~~~~~~~L~~-~~~~~~ 202 (409)
|+...... ...++.... .|. .....|..... ...+..+...........|.+.+.. .....+
T Consensus 151 p~~~~~~~-~~~a~~~~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~ 226 (350)
T KOG2521|consen 151 PARSSPVQ-LGWAVSFSS--PPD-DYVARWARLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPW 226 (350)
T ss_pred ccccchhh-hcceecccc--Cch-hhHHHHHhcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccc
Confidence 99865311 111111111 110 00000110000 0000000000000011112222221 123368
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhhhhHHHHHHhhhhc
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQRIQRLEREKM 282 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~~~~~~~~~~~~~~ 282 (409)
++||+||++|.++|++++|++++..+++|..|+.++|.||+||+|+|.+|..|++++.+|++++...+..+.+.|+.+..
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~~~~~~~~~~~ 306 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNLKNRILGIRAD 306 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccCCccCccceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877765544
Q ss_pred CCCCCCCCcCCccccccccccCCCCcccccccCCCCceeccCCccc
Q 015317 283 GLEGTHDDMADPMYNLSKAAVSPTRSFRGTSLVPSDHFVLPSSLEY 328 (409)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (409)
.+.+|++++++|++.+++.|.|+++||.++.+.|||++|+|.+|
T Consensus 307 --~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~ 350 (350)
T KOG2521|consen 307 --SAGDDPLTEKICSLFQVTLNLNRSSRRSPLVLDDHLEVPSSIPY 350 (350)
T ss_pred --CCCCchHHHHHHHHHHHHhccchhhhcccccccceeeccccCCC
Confidence 33899999999999999999999999999999999999999986
No 3
>PRK13604 luxD acyl transferase; Provisional
Probab=99.32 E-value=3.7e-11 Score=119.31 Aligned_cols=234 Identities=12% Similarity=0.130 Sum_probs=133.0
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccc---ccc-----CchhhhHHHHHHHHHHHHHhcCCCCcEEE
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFL---NMF-----FPEKAESLALDVLKELVEELKFGPCPVVF 90 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~---~~~-----~p~~~~~~a~~vL~~L~~~~~~~~~pIl~ 90 (409)
.+.+|+.||+.+.+ .+..++++...++|++||.++.+-. +-+ .-+.+..-+..+++++.+. ...+|++
T Consensus 37 ~~~vIi~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~---~~~~I~L 112 (307)
T PRK13604 37 NNTILIASGFARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR---GINNLGL 112 (307)
T ss_pred CCEEEEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc---CCCceEE
Confidence 46688888887754 5699999999999999999985321 111 0111223344567777553 2346999
Q ss_pred EEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhcc-ccccCCCChhH--H--H
Q 015317 91 ASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHP-SVLNMSHPPRL--V--S 165 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~-ai~~~p~~~~l--v--~ 165 (409)
+|+||||++.+.. .. ..+++++|.||+.++....+...+.... .++..+.+..+ . .
T Consensus 113 iG~SmGgava~~~-A~------------------~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~ 173 (307)
T PRK13604 113 IAASLSARIAYEV-IN------------------EIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHN 173 (307)
T ss_pred EEECHHHHHHHHH-hc------------------CCCCCEEEEcCCcccHHHHHHHhhhcccccCccccccccccccccc
Confidence 9999999863211 10 1359999999988886543322111100 01111101100 0 0
Q ss_pred HHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccc
Q 015317 166 RIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHV 245 (409)
Q Consensus 166 ~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV 245 (409)
+....++ ...+...+.. .. .++......+.|.|+|||++|++||+++++++++.++. .+++++.++++.|.
T Consensus 174 l~~~~f~---~~~~~~~~~~-~~---s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 174 LGSEVFV---TDCFKHGWDT-LD---STINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIGSSHD 244 (307)
T ss_pred ccHHHHH---HHHHhcCccc-cc---cHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCCCccc
Confidence 0000000 0111001110 00 11121223458999999999999999999999998664 46899999999997
Q ss_pred hhhccChHHHHHHHHHHHHHHhhhhhHHHHHHhhhhcCCCCCCCCcCCcccc
Q 015317 246 GHYRHYPIDYKAAVTELLGKAGAVYSQRIQRLEREKMGLEGTHDDMADPMYN 297 (409)
Q Consensus 246 ~H~r~hPeeY~~aV~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (409)
+-.++ -.+++|.+..... .+ +|+..... ...||.||--+
T Consensus 245 --l~~~~----~~~~~~~~~~~~~---~~-~~~~~~~~---~~~~~~~~~~~ 283 (307)
T PRK13604 245 --LGENL----VVLRNFYQSVTKA---AI-ALDNGSLD---LDVDIIEPSFE 283 (307)
T ss_pred --cCcch----HHHHHHHHHHHHH---Hh-eecCCccc---ccccccCCCHH
Confidence 33333 3556676654332 23 55554443 35666666544
No 4
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.21 E-value=6.2e-10 Score=103.55 Aligned_cols=191 Identities=15% Similarity=0.147 Sum_probs=118.9
Q ss_pred HHHHHHHHcCCcEEEEccccccc--------cCchhhh---HHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHH
Q 015317 38 RFVQLYSSLGWNSLICHSQFLNM--------FFPEKAE---SLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQ 106 (409)
Q Consensus 38 KYa~lY~~lG~nvLvv~s~~~~~--------~~p~~~~---~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~q 106 (409)
.....+.+.||.|+++..+...- +..+.+. ..+..++++|.+.....+..|.+.|+|+||.+++..+.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 46677889999999987765431 1111111 223344555555433334679999999999865554332
Q ss_pred HHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHH-HHHHHHHHhHhHHhhhhccc
Q 015317 107 ITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVS-RIANGIASGLDAFFLNRFES 185 (409)
Q Consensus 107 ll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~-~~~~~i~~~l~~l~~~~f~~ 185 (409)
..+..++.|..+++.+........ . . +.. +... +.... .
T Consensus 85 -----------------~~~~f~a~v~~~g~~d~~~~~~~~-----~------~--~~~~~~~~---------~~~~~-~ 124 (213)
T PF00326_consen 85 -----------------HPDRFKAAVAGAGVSDLFSYYGTT-----D------I--YTKAEYLE---------YGDPW-D 124 (213)
T ss_dssp -----------------TCCGSSEEEEESE-SSTTCSBHHT-----C------C--HHHGHHHH---------HSSTT-T
T ss_pred -----------------cceeeeeeeccceecchhcccccc-----c------c--cccccccc---------cCccc-h
Confidence 123578889888877765322110 0 0 000 0000 00000 0
Q ss_pred hhhHH--HHHhhccCC--CCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHH
Q 015317 186 HRAEY--WQTLYSSVR--FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTE 261 (409)
Q Consensus 186 ~~~~~--~~~L~~~~~--~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~ 261 (409)
....| +..+..... ...|.|++||++|..||++...++++++++.|.++++..|++..|.--...+..++.+.+.+
T Consensus 125 ~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 125 NPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp SHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH
Confidence 01111 112222222 56899999999999999999999999999999999999999999966666778899999999
Q ss_pred HHHHHhh
Q 015317 262 LLGKAGA 268 (409)
Q Consensus 262 Fl~~~~~ 268 (409)
|+++.+.
T Consensus 205 f~~~~l~ 211 (213)
T PF00326_consen 205 FFDKYLK 211 (213)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998653
No 5
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.18 E-value=4.2e-09 Score=109.07 Aligned_cols=221 Identities=14% Similarity=0.067 Sum_probs=124.1
Q ss_pred eeeeccCCCCCCCcEEEEecccCChH-HHHHHHHHHHHHcCCcEEEEccccccc--cCc--hhhhHHHHHHHHHHHHHhc
Q 015317 8 YYWGRKERGGRREGIVVVFAWMSSEE-RQLKRFVQLYSSLGWNSLICHSQFLNM--FFP--EKAESLALDVLKELVEELK 82 (409)
Q Consensus 8 ~~~~~~~~~~~~kplVVl~GW~gA~~-rhl~KYa~lY~~lG~nvLvv~s~~~~~--~~p--~~~~~~a~~vL~~L~~~~~ 82 (409)
+++..+. +++.|+||++|+.++.. .....+++...++||+||+++.+.... .++ .........++++|.....
T Consensus 184 ~l~~P~~--~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~ 261 (414)
T PRK05077 184 FLHLPKG--DGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPW 261 (414)
T ss_pred EEEECCC--CCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcc
Confidence 3444433 34678899998887643 345567888899999999998875321 111 1111233456666654332
Q ss_pred CCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChh
Q 015317 83 FGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPR 162 (409)
Q Consensus 83 ~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~ 162 (409)
....+|.+.|+|+||...+..... ...+|+++|..+++............ .+| ..
T Consensus 262 vd~~ri~l~G~S~GG~~Al~~A~~-----------------~p~ri~a~V~~~~~~~~~~~~~~~~~------~~p--~~ 316 (414)
T PRK05077 262 VDHTRVAAFGFRFGANVAVRLAYL-----------------EPPRLKAVACLGPVVHTLLTDPKRQQ------QVP--EM 316 (414)
T ss_pred cCcccEEEEEEChHHHHHHHHHHh-----------------CCcCceEEEEECCccchhhcchhhhh------hch--HH
Confidence 234579999999999754332111 11379999999987642110000000 011 00
Q ss_pred HHHHHHHHHHHhHhHHhhhhccchhhHHH---HHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc
Q 015317 163 LVSRIANGIASGLDAFFLNRFESHRAEYW---QTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW 239 (409)
Q Consensus 163 lv~~~~~~i~~~l~~l~~~~f~~~~~~~~---~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f 239 (409)
....+...+ +........+......+. ..+. ....++|.|+|+|++|.++|.++.+.+++... +.+++.+
T Consensus 317 ~~~~la~~l--g~~~~~~~~l~~~l~~~sl~~~~~l-~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~~i 389 (414)
T PRK05077 317 YLDVLASRL--GMHDASDEALRVELNRYSLKVQGLL-GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA----DGKLLEI 389 (414)
T ss_pred HHHHHHHHh--CCCCCChHHHHHHhhhccchhhhhh-ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC----CCeEEEc
Confidence 000000000 000000000000000000 0011 12466899999999999999999998776543 3577889
Q ss_pred CCCccchhhccChHHHHHHHHHHHHHH
Q 015317 240 NSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 240 ~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
++++|. ..+++..+.+.+|+++.
T Consensus 390 ~~~~~~----e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 390 PFKPVY----RNFDKALQEISDWLEDR 412 (414)
T ss_pred cCCCcc----CCHHHHHHHHHHHHHHH
Confidence 987444 48899999999999874
No 6
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.18 E-value=1.2e-08 Score=95.84 Aligned_cols=234 Identities=12% Similarity=0.100 Sum_probs=122.1
Q ss_pred CCceeeeeccCCCCCCCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccccccc-Cc---h---hhhHHHHHHHHH
Q 015317 4 FGGRYYWGRKERGGRREGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMF-FP---E---KAESLALDVLKE 76 (409)
Q Consensus 4 ~~~~~~~~~~~~~~~~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~-~p---~---~~~~~a~~vL~~ 76 (409)
.||+.+|.+.+...+.++||++|||.++.......+.+...+.||+|+.++.+....- .+ . .....+.++ ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~-~~ 88 (288)
T TIGR01250 10 DGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDEL-EE 88 (288)
T ss_pred CCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHH-HH
Confidence 3677667654322225789999999887766556666666777999999887653211 11 0 112234333 34
Q ss_pred HHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhh-hhhhccccc
Q 015317 77 LVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGA-RFAVHPSVL 155 (409)
Q Consensus 77 L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~-~~al~~ai~ 155 (409)
+.+.... .++++-|+|+||...+..+.. ...+|+++|+-++.......... ..... .+.
T Consensus 89 ~~~~~~~--~~~~liG~S~Gg~ia~~~a~~-----------------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~ 148 (288)
T TIGR01250 89 VREKLGL--DKFYLLGHSWGGMLAQEYALK-----------------YGQHLKGLIISSMLDSAPEYVKELNRLRK-ELP 148 (288)
T ss_pred HHHHcCC--CcEEEEEeehHHHHHHHHHHh-----------------CccccceeeEecccccchHHHHHHHHHHh-hcC
Confidence 5555443 349999999999754332211 12468888887754322110000 00000 000
Q ss_pred c-----------C--CCChhHHHHHHHHHHHhHh------HHhhhhccchhhHHHHH------------------hhccC
Q 015317 156 N-----------M--SHPPRLVSRIANGIASGLD------AFFLNRFESHRAEYWQT------------------LYSSV 198 (409)
Q Consensus 156 ~-----------~--p~~~~lv~~~~~~i~~~l~------~l~~~~f~~~~~~~~~~------------------L~~~~ 198 (409)
. . ...+.....+......... .............++.. ...-.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (288)
T TIGR01250 149 PEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLS 228 (288)
T ss_pred hhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhh
Confidence 0 0 0000000000000000000 00000000000000000 00112
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+++|+.|.+ +.+..+.+++... .++.+.++++.|.-++ .+|+++.+.|.+|++
T Consensus 229 ~i~~P~lii~G~~D~~-~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 229 EIKVPTLLTVGEFDTM-TPEAAREMQELIA----GSRLVVFPDGSHMTMI-EDPEVYFKLLSDFIR 288 (288)
T ss_pred ccCCCEEEEecCCCcc-CHHHHHHHHHhcc----CCeEEEeCCCCCCccc-CCHHHHHHHHHHHhC
Confidence 4568999999999985 5677777665443 3577889999999887 489999999999974
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.17 E-value=3.9e-09 Score=104.60 Aligned_cols=65 Identities=11% Similarity=0.119 Sum_probs=50.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhcc---ChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRH---YPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~---hPeeY~~aV~~Fl~~ 265 (409)
...+|.|+|+|++|.++|++.++++++..... +++.+.|+++.|.-++.. ..+++.+.|.+|+++
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAKSE--DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhccC--CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 45689999999999999999999998876533 478889999998755432 224567777788776
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.13 E-value=7.5e-09 Score=99.39 Aligned_cols=224 Identities=13% Similarity=0.107 Sum_probs=122.6
Q ss_pred CCcEEEE-ecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCc-----hhhhHHHHHHHHHHHHHhc-CCCCcEEEE
Q 015317 19 REGIVVV-FAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFP-----EKAESLALDVLKELVEELK-FGPCPVVFA 91 (409)
Q Consensus 19 ~kplVVl-~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p-----~~~~~~a~~vL~~L~~~~~-~~~~pIl~H 91 (409)
.+++|++ |||.+. .......++.+.+.||.++.++.+....--+ +.......++++.+....+ ....++++.
T Consensus 24 ~~~~v~llHG~~~~-~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lv 102 (276)
T PHA02857 24 PKALVFISHGAGEH-SGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLL 102 (276)
T ss_pred CCEEEEEeCCCccc-cchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 4566666 999764 4456778888889999999998765322111 1111233444443322111 123579999
Q ss_pred EccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhh--hhhccccc-cCCCChhH-HHHH
Q 015317 92 SFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGAR--FAVHPSVL-NMSHPPRL-VSRI 167 (409)
Q Consensus 92 ~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~--~al~~ai~-~~p~~~~l-v~~~ 167 (409)
|+|+||..++..... ..++|+++|+-|++.......... ........ .......+ ..++
T Consensus 103 G~S~GG~ia~~~a~~-----------------~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (276)
T PHA02857 103 GHSMGATISILAAYK-----------------NPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESV 165 (276)
T ss_pred EcCchHHHHHHHHHh-----------------CccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhc
Confidence 999999754432211 124689999999765432100000 00000000 00000000 0000
Q ss_pred HH---HHH-HhHhHHhh---------hhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCce
Q 015317 168 AN---GIA-SGLDAFFL---------NRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADV 234 (409)
Q Consensus 168 ~~---~i~-~~l~~l~~---------~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V 234 (409)
.. ... ...+.+.. .............+ ...++|.|+|+|++|.++|.+..+++++.... ++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~---~~ 239 (276)
T PHA02857 166 SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKII---PKIKTPILILQGTNNEISDVSGAYYFMQHANC---NR 239 (276)
T ss_pred cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhc---ccCCCCEEEEecCCCCcCChHHHHHHHHHccC---Cc
Confidence 00 000 00000000 00000000111122 24678999999999999999999999887643 57
Q ss_pred EEEEcCCCccchhhccC--hHHHHHHHHHHHHHH
Q 015317 235 KLVKWNSSPHVGHYRHY--PIDYKAAVTELLGKA 266 (409)
Q Consensus 235 ~~~~f~dS~HV~H~r~h--PeeY~~aV~~Fl~~~ 266 (409)
+...++++.|.-|.-.. .++.++.+.+|+++.
T Consensus 240 ~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 240 EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 89999999999997754 678888999999874
No 9
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.12 E-value=2.8e-09 Score=91.73 Aligned_cols=145 Identities=14% Similarity=0.189 Sum_probs=101.5
Q ss_pred cEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHH
Q 015317 21 GIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKAC 100 (409)
Q Consensus 21 plVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~ 100 (409)
+||++|||.+... .+..+++.+.+.||++++++.+...-- . ....+.++++.+..... ...+|++-|+|+||..+
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a 75 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDS--D-GADAVERVLADIRAGYP-DPDRIILIGHSMGGAIA 75 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTS--H-HSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCcc--c-hhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHH
Confidence 5899999988655 578999999999999999977654222 1 11234455555433223 45689999999999764
Q ss_pred HHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHHhHhHHhh
Q 015317 101 MYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFL 180 (409)
Q Consensus 101 l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~~l~~l~~ 180 (409)
+..+.+ - ++|+++|+-+++.+ . .
T Consensus 76 ~~~~~~-----------------~-~~v~~~v~~~~~~~-~----~---------------------------------- 98 (145)
T PF12695_consen 76 ANLAAR-----------------N-PRVKAVVLLSPYPD-S----E---------------------------------- 98 (145)
T ss_dssp HHHHHH-----------------S-TTESEEEEESESSG-C----H----------------------------------
T ss_pred HHHhhh-----------------c-cceeEEEEecCccc-h----h----------------------------------
Confidence 443321 1 47899998885200 0 0
Q ss_pred hhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccc
Q 015317 181 NRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHV 245 (409)
Q Consensus 181 ~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV 245 (409)
.+ ...+.|.|+++|++|.++|.+.++++++.++ .+++++.++++.|.
T Consensus 99 ------------~~---~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 ------------DL---AKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp ------------HH---TTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred ------------hh---hccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 00 0123599999999999999999999999887 46899999999994
No 10
>PRK10566 esterase; Provisional
Probab=99.11 E-value=2e-08 Score=94.94 Aligned_cols=204 Identities=13% Similarity=0.061 Sum_probs=112.3
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccc---cCch--------h---hhHHHHHHHHHHHHHhcCC
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNM---FFPE--------K---AESLALDVLKELVEELKFG 84 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~---~~p~--------~---~~~~a~~vL~~L~~~~~~~ 84 (409)
.+.||++|||.+.+. ....+++.+.++||+|++++.+.... ..+. . ...-...+++++.+.....
T Consensus 27 ~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (249)
T PRK10566 27 LPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLL 105 (249)
T ss_pred CCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 478999999977654 46778889999999999987764211 0000 0 0011122344444322123
Q ss_pred CCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceE-E-EecCCCCCccchhhhhhhhccccccCCCChh
Q 015317 85 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSG-Q-IYDSSPVDFTSDLGARFAVHPSVLNMSHPPR 162 (409)
Q Consensus 85 ~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG-~-I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~ 162 (409)
...|++.|+|+||.++++.+.+ .+.+++ + ++.++ .+.. +.. ....+.....+ .
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~------------------~~~~~~~~~~~~~~--~~~~-~~~-~~~~~~~~~~~---~ 160 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMAR------------------HPWVKCVASLMGSG--YFTS-LAR-TLFPPLIPETA---A 160 (249)
T ss_pred ccceeEEeecccHHHHHHHHHh------------------CCCeeEEEEeeCcH--HHHH-HHH-Hhccccccccc---c
Confidence 4579999999999875544221 012333 2 23332 1111 100 00000000000 0
Q ss_pred HHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCC--ceEEEEcC
Q 015317 163 LVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGA--DVKLVKWN 240 (409)
Q Consensus 163 lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~--~V~~~~f~ 240 (409)
....+ ...+ ..+... +....+. ...+.|.|+|||++|.+||++..+++++..+..|. +++.+.++
T Consensus 161 ~~~~~--------~~~~-~~~~~~--~~~~~~~--~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~ 227 (249)
T PRK10566 161 QQAEF--------NNIV-APLAEW--EVTHQLE--QLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEP 227 (249)
T ss_pred cHHHH--------HHHH-HHHhhc--Chhhhhh--hcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecC
Confidence 00000 0000 000000 0001111 11247999999999999999999999999988876 47888899
Q ss_pred CCccchhhccChHHHHHHHHHHHHHH
Q 015317 241 SSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 241 dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
++.|.- .++ -.+.+.+||++.
T Consensus 228 ~~~H~~----~~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 228 GVRHRI----TPE-ALDAGVAFFRQH 248 (249)
T ss_pred CCCCcc----CHH-HHHHHHHHHHhh
Confidence 999963 344 568888898864
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.10 E-value=2.7e-08 Score=99.24 Aligned_cols=68 Identities=13% Similarity=0.165 Sum_probs=56.8
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCC---CceEEEEcCCCccchhhccC--hHHHHHHHHHHHHH
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLG---ADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLGK 265 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G---~~V~~~~f~dS~HV~H~r~h--PeeY~~aV~~Fl~~ 265 (409)
...+.|.|+|+|++|.+||++.++.+++..++.| .+++++.++++.|.-+.-.+ .++.++.|.+|+++
T Consensus 256 ~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 256 GDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred cCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 3467899999999999999999999998877654 34689999999999887655 67788888888875
No 12
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.07 E-value=2.5e-08 Score=100.08 Aligned_cols=235 Identities=14% Similarity=0.166 Sum_probs=119.8
Q ss_pred eeeccCCCCCCCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccC-c----hhhhHHHHHHHHHHHHHh--
Q 015317 9 YWGRKERGGRREGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFF-P----EKAESLALDVLKELVEEL-- 81 (409)
Q Consensus 9 ~~~~~~~~~~~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~-p----~~~~~~a~~vL~~L~~~~-- 81 (409)
.|+..+. ...++||++|||.+.........++.+.+.||+|+.++.+....-- + .....++.++++.+....
T Consensus 78 ~~~p~~~-~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~ 156 (349)
T PLN02385 78 SWLPENS-RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGN 156 (349)
T ss_pred EEecCCC-CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhc
Confidence 3765431 1246789999997765444566777778889999999876532110 0 111234555543332211
Q ss_pred -cCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccch-----hhhhh--hhccc
Q 015317 82 -KFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSD-----LGARF--AVHPS 153 (409)
Q Consensus 82 -~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~-----~g~~~--al~~a 153 (409)
...+.++++-|+||||...+....+ ....|+|+|+=++....... ....+ .+...
T Consensus 157 ~~~~~~~~~LvGhSmGG~val~~a~~-----------------~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T PLN02385 157 PEFRGLPSFLFGQSMGGAVALKVHLK-----------------QPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANL 219 (349)
T ss_pred cccCCCCEEEEEeccchHHHHHHHHh-----------------CcchhhheeEecccccccccccCchHHHHHHHHHHHH
Confidence 1123469999999999754332211 12367888877743322110 00000 00000
Q ss_pred cccC-CCChh-HHHHHHH-----HHHHhHhHH-hhh--hccchhhHHHH---Hh-hccCCCCCCEEEEecCCCCccChHH
Q 015317 154 VLNM-SHPPR-LVSRIAN-----GIASGLDAF-FLN--RFESHRAEYWQ---TL-YSSVRFGAPYLILCSEDDDLAPYQV 219 (409)
Q Consensus 154 i~~~-p~~~~-lv~~~~~-----~i~~~l~~l-~~~--~f~~~~~~~~~---~L-~~~~~~~~P~LyIYS~~D~lVP~~~ 219 (409)
+++. ..+.. +..+... .+.. .... +.. .+... ..... .+ ......++|.|+|+|++|.++|.+.
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~ 297 (349)
T PLN02385 220 LPKAKLVPQKDLAELAFRDLKKRKMAE-YNVIAYKDKPRLRTA-VELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSV 297 (349)
T ss_pred CCCceecCCCccccccccCHHHHHHhh-cCcceeCCCcchHHH-HHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHH
Confidence 0000 00000 0000000 0000 0000 000 00000 00000 01 1113457899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEEEcCCCccchhhccChHH----HHHHHHHHHHHH
Q 015317 220 IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPID----YKAAVTELLGKA 266 (409)
Q Consensus 220 Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPee----Y~~aV~~Fl~~~ 266 (409)
.+++++.+... +++.+.++++.|.-+ ..+|++ ..+.|.+|+++.
T Consensus 298 ~~~l~~~~~~~--~~~l~~i~~~gH~l~-~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 298 SKFLYEKASSS--DKKLKLYEDAYHSIL-EGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHHcCCC--CceEEEeCCCeeecc-cCCChhhHHHHHHHHHHHHHHh
Confidence 99999876532 478889999999854 456776 555677777653
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.05 E-value=2e-08 Score=96.12 Aligned_cols=61 Identities=16% Similarity=0.203 Sum_probs=52.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
...+|.|+|+|+.|.++|.+..+++++..+ +++.+.+++++|.- ...+|++..++|.+|++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 456899999999999999999988877654 47888899999995 56899999999999985
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.05 E-value=3.4e-08 Score=101.74 Aligned_cols=225 Identities=10% Similarity=0.099 Sum_probs=124.2
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccC-----chhhhHHH---HHHHHHHHHHhcCCCCcEEE
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFF-----PEKAESLA---LDVLKELVEELKFGPCPVVF 90 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~-----p~~~~~~a---~~vL~~L~~~~~~~~~pIl~ 90 (409)
.++||++|||.+.... ...+++.+.+.||+|+.++.+...--. .......+ ..+++.+.... ...++++
T Consensus 136 ~~~Vl~lHG~~~~~~~-~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~l 212 (395)
T PLN02652 136 RGILIIIHGLNEHSGR-YLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFL 212 (395)
T ss_pred ceEEEEECCchHHHHH-HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEE
Confidence 4578899999875443 567888888899999998776432100 00111122 23334333322 2347999
Q ss_pred EEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccch--h-hhhhhh-ccccccC--CCChh--
Q 015317 91 ASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSD--L-GARFAV-HPSVLNM--SHPPR-- 162 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~--~-g~~~al-~~ai~~~--p~~~~-- 162 (409)
.|+||||...+... . . ......|+|+|+.|+....... . .....+ ....++. +....
T Consensus 213 vGhSmGG~ial~~a-~----~----------p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~ 277 (395)
T PLN02652 213 FGHSTGGAVVLKAA-S----Y----------PSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRG 277 (395)
T ss_pred EEECHHHHHHHHHH-h----c----------cCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCccccc
Confidence 99999997644321 1 0 1123479999998865332210 0 000000 0000000 00000
Q ss_pred --H---HHHHHHHHHHhHhHHhhhhccchh-----hHHHHHhhc-cCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCC
Q 015317 163 --L---VSRIANGIASGLDAFFLNRFESHR-----AEYWQTLYS-SVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLG 231 (409)
Q Consensus 163 --l---v~~~~~~i~~~l~~l~~~~f~~~~-----~~~~~~L~~-~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G 231 (409)
+ -........ +.+.....-... ......+.+ -...++|.|+|||++|.++|++..+++++....
T Consensus 278 ~~~s~~~~~~~~~~~---dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~-- 352 (395)
T PLN02652 278 IPVSRDPAALLAKYS---DPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAAS-- 352 (395)
T ss_pred CCcCCCHHHHHHHhc---CCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCC--
Confidence 0 000000000 000000000000 000000111 134579999999999999999999999987643
Q ss_pred CceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 232 ADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 232 ~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
.+++.+.++++.|.-++..+++++.+.|.+|++..
T Consensus 353 ~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 353 RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 35788899999999888889999999999999864
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.04 E-value=2e-08 Score=93.01 Aligned_cols=61 Identities=25% Similarity=0.393 Sum_probs=52.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+++|++|.++|++..+++++... +++.+.++++.|.-+ ..+|+++.+.|.+|++
T Consensus 196 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 196 RIQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPYGGHASN-VTDPETFNRALLDFLK 256 (257)
T ss_pred ccCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECCCCCCcc-ccCHHHHHHHHHHHhc
Confidence 456899999999999999999988877643 357788999999955 5799999999999986
No 16
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.01 E-value=1.3e-08 Score=96.10 Aligned_cols=218 Identities=12% Similarity=0.073 Sum_probs=127.6
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccc----cCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEcc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNM----FFPEKAESLALDVLKELVEELKFGPCPVVFASFS 94 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~----~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FS 94 (409)
++.|.+|||++|++ +.+.--.+..++.||+|....-+.... |......++-+++.+....-.+..-..|.+-|+|
T Consensus 15 ~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 58899999999855 456777777888999998876554321 1111112333344433222111222459999999
Q ss_pred CcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhh--hh-hccccccCCCChhHHHHHHHHH
Q 015317 95 GGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGAR--FA-VHPSVLNMSHPPRLVSRIANGI 171 (409)
Q Consensus 95 nGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~--~a-l~~ai~~~p~~~~lv~~~~~~i 171 (409)
|||..++- +.+ .-++|++|.=|+|....+.-... +. ..-...+...... ..+..-
T Consensus 94 mGGv~alk-la~------------------~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~--e~~~~e- 151 (243)
T COG1647 94 MGGVFALK-LAY------------------HYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQ--EQIDKE- 151 (243)
T ss_pred chhHHHHH-HHh------------------hCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCH--HHHHHH-
Confidence 99964221 111 12699999999997753211100 00 0000000000000 000000
Q ss_pred HHhHhHHhhhhccchhhHHHH----HhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchh
Q 015317 172 ASGLDAFFLNRFESHRAEYWQ----TLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGH 247 (409)
Q Consensus 172 ~~~l~~l~~~~f~~~~~~~~~----~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H 247 (409)
+.. |......+.+.+.+ ...+...+..|.+++.+++|.+||.+.++-+++..... ++++..+++|.||-.
T Consensus 152 ~~~----~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt 225 (243)
T COG1647 152 MKS----YKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLEGSGHVIT 225 (243)
T ss_pred HHH----hhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC--cceeEEEccCCceee
Confidence 000 00000011111111 11122346789999999999999999999999987653 789999999999999
Q ss_pred hccChHHHHHHHHHHHHH
Q 015317 248 YRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 248 ~r~hPeeY~~aV~~Fl~~ 265 (409)
.-...+.-.++|..||++
T Consensus 226 ~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 226 LDKERDQVEEDVITFLEK 243 (243)
T ss_pred cchhHHHHHHHHHHHhhC
Confidence 999999999999999873
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.98 E-value=6e-08 Score=88.67 Aligned_cols=61 Identities=16% Similarity=0.352 Sum_probs=52.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+|+|++|.++|.+.++.+.+..+ ..+.+.++++.|..++ .+|+++.+.|.+|++
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGHIPCV-EQPEAFNAALRDFLR 251 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCCcccc-cChHHHHHHHHHHhC
Confidence 456899999999999999998888777654 3577889999999887 679999999999973
No 18
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.98 E-value=3.6e-08 Score=98.39 Aligned_cols=208 Identities=14% Similarity=0.108 Sum_probs=112.4
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCc--h--hhhHHHHHHHHHHHHHhcCCCCcEEEEEcc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFP--E--KAESLALDVLKELVEELKFGPCPVVFASFS 94 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p--~--~~~~~a~~vL~~L~~~~~~~~~pIl~H~FS 94 (409)
.++||++|||.++... ....... ...+|+|+.++.+....-.+ . ....++.++. .+++... ..++++.|+|
T Consensus 131 ~~~vl~~HG~~~~~~~-~~~~~~~-l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~lvG~S 205 (371)
T PRK14875 131 GTPVVLIHGFGGDLNN-WLFNHAA-LAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVL-AFLDALG--IERAHLVGHS 205 (371)
T ss_pred CCeEEEECCCCCccch-HHHHHHH-HhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH-HHHHhcC--CccEEEEeec
Confidence 5789999999876553 3333443 34469999988775432211 1 1123443333 3444443 2469999999
Q ss_pred CcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccc---hhhhhhhhccccccCCCChhHHHHHHHHH
Q 015317 95 GGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS---DLGARFAVHPSVLNMSHPPRLVSRIANGI 171 (409)
Q Consensus 95 nGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~---~~g~~~al~~ai~~~p~~~~lv~~~~~~i 171 (409)
+||...+....+ ...++.++|+.++++.... .+...+.. . .....+..++....
T Consensus 206 ~Gg~~a~~~a~~-----------------~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~ 262 (371)
T PRK14875 206 MGGAVALRLAAR-----------------APQRVASLTLIAPAGLGPEINGDYIDGFVA---A---ESRRELKPVLELLF 262 (371)
T ss_pred hHHHHHHHHHHh-----------------CchheeEEEEECcCCcCcccchhHHHHhhc---c---cchhHHHHHHHHHh
Confidence 999764433211 1236889998886543321 00000000 0 00000101110000
Q ss_pred --------------HH---------hHhHHhhhhccc--hhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHH
Q 015317 172 --------------AS---------GLDAFFLNRFES--HRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQR 226 (409)
Q Consensus 172 --------------~~---------~l~~l~~~~f~~--~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~ 226 (409)
.. .+..+....+.. +...+...+ ...++|.|+|+|++|.++|++..+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~Pvlii~g~~D~~vp~~~~~~l~~- 338 (371)
T PRK14875 263 ADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRL---ASLAIPVLVIWGEQDRIIPAAHAQGLPD- 338 (371)
T ss_pred cChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHH---hcCCCCEEEEEECCCCccCHHHHhhccC-
Confidence 00 000000000000 001111112 2456899999999999999887654432
Q ss_pred HHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 227 LCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 227 ~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
.++.+.++++.|.-++ .+|++..+.|.+|+++
T Consensus 339 ------~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 339 ------GVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred ------CCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 4788899999998665 6899999999999975
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.98 E-value=1.2e-07 Score=100.06 Aligned_cols=64 Identities=13% Similarity=0.261 Sum_probs=57.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
..++|.|+|+|++|.++|.+..+.+++... +++++.+++++|+.++..+|++|.+.|.+||+..
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 356899999999999999999999877654 4788999999999999999999999999999753
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.95 E-value=1.3e-07 Score=84.72 Aligned_cols=206 Identities=17% Similarity=0.193 Sum_probs=111.5
Q ss_pred EEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCc------hhhhHHHHHHHHHHHHHhcCCCCcEEEEEccC
Q 015317 22 IVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFP------EKAESLALDVLKELVEELKFGPCPVVFASFSG 95 (409)
Q Consensus 22 lVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p------~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSn 95 (409)
||+|||+.+.. ....+.++.. ..|+++++++.+....-.+ ......+.++. ++++.... .++++.|+|+
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~-~~l~~~~~--~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLA-ELLDALGI--KKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHH-HHHHHTTT--SSEEEEEETH
T ss_pred eEEECCCCCCH-HHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhh-hccccccc--cccccccccc
Confidence 78999998876 4466677766 5799999998775322111 11123444443 45555543 5699999999
Q ss_pred cHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchh--hhhhhhccccccCCCChhHHHHHHHHHHH
Q 015317 96 GPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDL--GARFAVHPSVLNMSHPPRLVSRIANGIAS 173 (409)
Q Consensus 96 GG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~--g~~~al~~ai~~~p~~~~lv~~~~~~i~~ 173 (409)
||...+..+.+ ..+.|+++|+-+++....... ...-.+...+.... ......+....+..
T Consensus 76 Gg~~a~~~a~~-----------------~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 137 (228)
T PF12697_consen 76 GGMIALRLAAR-----------------YPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWR-SRSLRRLASRFFYR 137 (228)
T ss_dssp HHHHHHHHHHH-----------------SGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred ccccccccccc-----------------cccccccceeecccccccccccccccchhhhhhhhcc-cccccccccccccc
Confidence 99754333211 124799999999777543211 00000000000000 00000000000000
Q ss_pred hH-----hHHh-------hhhccc--hhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc
Q 015317 174 GL-----DAFF-------LNRFES--HRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW 239 (409)
Q Consensus 174 ~l-----~~l~-------~~~f~~--~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f 239 (409)
.+ ..+. ...++. ....++..+ ...+.|.|+|+|++|.++|.+.++.+.+... .++...+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~ 210 (228)
T PF12697_consen 138 WFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEAL---PRIKVPVLVIHGEDDPIVPPESAEELADKLP----NAELVVI 210 (228)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HGSSSEEEEEEETTSSSSHHHHHHHHHHHST----TEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccc---cccCCCeEEeecCCCCCCCHHHHHHHHHHCC----CCEEEEE
Confidence 00 0000 000000 011111122 2346899999999999999888877776543 5899999
Q ss_pred CCCccchhhccChHHHHHH
Q 015317 240 NSSPHVGHYRHYPIDYKAA 258 (409)
Q Consensus 240 ~dS~HV~H~r~hPeeY~~a 258 (409)
+++.|.-++. +|++..++
T Consensus 211 ~~~gH~~~~~-~p~~~~~a 228 (228)
T PF12697_consen 211 PGAGHFLFLE-QPDEVAEA 228 (228)
T ss_dssp TTSSSTHHHH-SHHHHHHH
T ss_pred CCCCCccHHH-CHHHHhcC
Confidence 9999998775 88876553
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.94 E-value=8.5e-08 Score=92.47 Aligned_cols=64 Identities=17% Similarity=0.246 Sum_probs=52.6
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 268 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~ 268 (409)
..++|.|+|+|+.|.++|.+.++++.+.... .+.+.+++ .|.-+. .+|+++.++|.+|+++...
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~----~~~~~i~~-gH~~~~-e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIPN----AELHIIDD-GHLFLI-TRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC----CEEEEEcC-CCchhh-ccHHHHHHHHHHHHHHhhh
Confidence 4568999999999999999999999876542 45556665 898776 6999999999999987543
No 22
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.93 E-value=6e-08 Score=88.55 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=51.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 263 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl 263 (409)
..++|.|+|+|++|.++|.+..+.+.+..+ +++...+++++|..++ .+|+++.+.|.+|+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP----HSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 567899999999999999998887766543 4788899999999887 68999999999985
No 23
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.91 E-value=1.6e-07 Score=91.24 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=51.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
...+|.|+|+|++|.++|.+..+.+.+. . ...+.+.+++++|.-|+ .+|++..+.|.+|+++
T Consensus 232 ~i~~P~lvi~G~~D~~~~~~~~~~~~~~-~---~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 232 AVKCPVLIAWGEKDPWEPVELGRAYANF-D---AVEDFIVLPGVGHCPQD-EAPELVNPLIESFVAR 293 (294)
T ss_pred hcCCCeEEEEecCCCCCChHHHHHHHhc-C---CccceEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 4578999999999999999888775442 2 23577889999999887 8899999999999975
No 24
>PRK11460 putative hydrolase; Provisional
Probab=98.90 E-value=3.7e-07 Score=87.07 Aligned_cols=64 Identities=14% Similarity=0.041 Sum_probs=54.6
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhh
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAV 269 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~ 269 (409)
..|.|++||++|++||++..+++++.+++.|.+++.+.+++..|.= . .+-.+.+.+|+++.+..
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i----~-~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI----D-PRLMQFALDRLRYTVPK 211 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC----C-HHHHHHHHHHHHHHcch
Confidence 4699999999999999999999999999999999999999999974 2 45667777888776643
No 25
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.90 E-value=1.7e-08 Score=95.07 Aligned_cols=212 Identities=17% Similarity=0.187 Sum_probs=131.9
Q ss_pred eeeeccCCCCCCCcEEEEecccCChHHHHHHHHH-HHHHcCCcEEEEcccc--ccccCchh-hh-HHHHHHHHHHHHHhc
Q 015317 8 YYWGRKERGGRREGIVVVFAWMSSEERQLKRFVQ-LYSSLGWNSLICHSQF--LNMFFPEK-AE-SLALDVLKELVEELK 82 (409)
Q Consensus 8 ~~~~~~~~~~~~kplVVl~GW~gA~~rhl~KYa~-lY~~lG~nvLvv~s~~--~~~~~p~~-~~-~~a~~vL~~L~~~~~ 82 (409)
.||-..+ ++.++|..+|+=+| +..|-..-+. +|+.++.||+++.-+. .+-+.|.. ++ ..++.+|+.|-....
T Consensus 69 a~~~~~E--~S~pTlLyfh~NAG-NmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~ 145 (300)
T KOG4391|consen 69 AYLMLSE--SSRPTLLYFHANAG-NMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPD 145 (300)
T ss_pred eeeeccc--CCCceEEEEccCCC-cccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCcc
Confidence 4666544 34566666666655 4445444444 7999999998876554 23344533 33 245667777766544
Q ss_pred CCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChh
Q 015317 83 FGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPR 162 (409)
Q Consensus 83 ~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~ 162 (409)
-....|++.|-|.||+.+++-.. ....++.++|+.-+...... ++.. -+ .|.+-+
T Consensus 146 ~dktkivlfGrSlGGAvai~las-----------------k~~~ri~~~ivENTF~SIp~-----~~i~-~v--~p~~~k 200 (300)
T KOG4391|consen 146 LDKTKIVLFGRSLGGAVAIHLAS-----------------KNSDRISAIIVENTFLSIPH-----MAIP-LV--FPFPMK 200 (300)
T ss_pred CCcceEEEEecccCCeeEEEeec-----------------cchhheeeeeeechhccchh-----hhhh-ee--ccchhh
Confidence 44567999999999975333211 12247899998876433211 1100 00 010111
Q ss_pred HHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCC
Q 015317 163 LVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSS 242 (409)
Q Consensus 163 lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS 242 (409)
.+..+ .+-+.|..++. + ...+.|.|||-|.+|.+||+.++..+++.+... .+++..|++.
T Consensus 201 ~i~~l----------c~kn~~~S~~k-----i---~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~g 260 (300)
T KOG4391|consen 201 YIPLL----------CYKNKWLSYRK-----I---GQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDG 260 (300)
T ss_pred HHHHH----------HHHhhhcchhh-----h---ccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCC
Confidence 11110 01111211111 1 245689999999999999999999999987654 4788899999
Q ss_pred ccchhhccChHHHHHHHHHHHHHHhhh
Q 015317 243 PHVGHYRHYPIDYKAAVTELLGKAGAV 269 (409)
Q Consensus 243 ~HV~H~r~hPeeY~~aV~~Fl~~~~~~ 269 (409)
.|-..+-.| -||++|.+|+.+....
T Consensus 261 tHNDT~i~d--GYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 261 THNDTWICD--GYFQAIEDFLAEVVKS 285 (300)
T ss_pred ccCceEEec--cHHHHHHHHHHHhccC
Confidence 999888875 6999999999886543
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.86 E-value=3.3e-07 Score=85.73 Aligned_cols=211 Identities=13% Similarity=0.153 Sum_probs=110.6
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccccccc-Cc--hhhhHHHHHHHHHHHHHhcCCCCcEEEEEccC
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMF-FP--EKAESLALDVLKELVEELKFGPCPVVFASFSG 95 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~-~p--~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSn 95 (409)
.++||+||||.++.. .-.+.++.. + +|+++.++.+....- .+ ......+.+++ .++++.. ..++++.|+||
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~-~~l~~~~--~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISVDGFADVSRLLS-QTLQSYN--ILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHc-C-CCCEEEecCCCCCCCCCccccCHHHHHHHHH-HHHHHcC--CCCeEEEEECH
Confidence 367999999988765 446666655 3 799999888653221 11 11124454544 3444443 25699999999
Q ss_pred cHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhh-c-ccc-ccCCC--ChhHH-HHHHH
Q 015317 96 GPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAV-H-PSV-LNMSH--PPRLV-SRIAN 169 (409)
Q Consensus 96 GG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al-~-~ai-~~~p~--~~~lv-~~~~~ 169 (409)
||...+....+ . + ...|+++|+.+++............. . ... ..+.. ...+. .|+..
T Consensus 76 Gg~va~~~a~~----~-----~-------~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (242)
T PRK11126 76 GGRIAMYYACQ----G-----L-------AGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQ 139 (242)
T ss_pred HHHHHHHHHHh----C-----C-------cccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhc
Confidence 99764443221 0 0 01388999988665432210000000 0 000 00000 00000 01000
Q ss_pred HHHHhHh-----HHhhhhc---c------------chhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHh
Q 015317 170 GIASGLD-----AFFLNRF---E------------SHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCD 229 (409)
Q Consensus 170 ~i~~~l~-----~l~~~~f---~------------~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~ 229 (409)
.....+. .+..... . ......+..+ ...++|.|+|+|++|.++. ..++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~P~lii~G~~D~~~~-----~~~~~--- 208 (242)
T PRK11126 140 PVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPAL---QALTFPFYYLCGERDSKFQ-----ALAQQ--- 208 (242)
T ss_pred chhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHh---hccCCCeEEEEeCCcchHH-----HHHHH---
Confidence 0000000 0000000 0 0000111222 2456899999999998652 22222
Q ss_pred CCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 230 LGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 230 ~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
...+.+.+++++|.-++ .+|+++.+.|.+|+++
T Consensus 209 --~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 209 --LALPLHVIPNAGHNAHR-ENPAAFAASLAQILRL 241 (242)
T ss_pred --hcCeEEEeCCCCCchhh-hChHHHHHHHHHHHhh
Confidence 14788899999999886 8899999999999976
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.84 E-value=3.1e-07 Score=83.54 Aligned_cols=60 Identities=25% Similarity=0.375 Sum_probs=45.6
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+|+|++|.+++ +. .+.+.+....++.+.++++.|.-++ .+|++..+.|.+|++
T Consensus 192 ~~~~P~l~i~g~~D~~~~-~~----~~~~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 192 ALTIPVLYLCGEKDEKFV-QI----AKEMQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCceEEEeeCcchHHH-HH----HHHHHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHhC
Confidence 456899999999998763 32 3333434345788889999999877 568999999999973
No 28
>PLN02511 hydrolase
Probab=98.82 E-value=1.2e-07 Score=97.33 Aligned_cols=223 Identities=17% Similarity=0.174 Sum_probs=116.6
Q ss_pred CCcEEEEecccCChH-HHHHHHHHHHHHcCCcEEEEccccccc---cCc----hhhhHHHHHHHHHHHHHhcCCCCcEEE
Q 015317 19 REGIVVVFAWMSSEE-RQLKRFVQLYSSLGWNSLICHSQFLNM---FFP----EKAESLALDVLKELVEELKFGPCPVVF 90 (409)
Q Consensus 19 ~kplVVl~GW~gA~~-rhl~KYa~lY~~lG~nvLvv~s~~~~~---~~p----~~~~~~a~~vL~~L~~~~~~~~~pIl~ 90 (409)
.+.||++|||.|+.. ..+...+....+.||+|++++.+...- ..+ .........+++.|....+ ..++++
T Consensus 100 ~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~~~l 177 (388)
T PLN02511 100 APVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYP--SANLYA 177 (388)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCC--CCCEEE
Confidence 456899999988654 345555666678999999987764211 011 1111223345566554433 246999
Q ss_pred EEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHH
Q 015317 91 ASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANG 170 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~ 170 (409)
.|+|+||...+..+.+ . + . ..+|++.|.=|+|.+..... ..+ ....... ....+...+...
T Consensus 178 vG~SlGg~i~~~yl~~----~-----~-----~-~~~v~~~v~is~p~~l~~~~-~~~--~~~~~~~-y~~~~~~~l~~~ 238 (388)
T PLN02511 178 AGWSLGANILVNYLGE----E-----G-----E-NCPLSGAVSLCNPFDLVIAD-EDF--HKGFNNV-YDKALAKALRKI 238 (388)
T ss_pred EEechhHHHHHHHHHh----c-----C-----C-CCCceEEEEECCCcCHHHHH-HHH--hccHHHH-HHHHHHHHHHHH
Confidence 9999999764433322 1 0 0 12466665557777642100 000 0000000 000000000000
Q ss_pred HH------------------------HhHhHHhh---hhccchhhHHHHH---hhccCCCCCCEEEEecCCCCccChHHH
Q 015317 171 IA------------------------SGLDAFFL---NRFESHRAEYWQT---LYSSVRFGAPYLILCSEDDDLAPYQVI 220 (409)
Q Consensus 171 i~------------------------~~l~~l~~---~~f~~~~~~~~~~---L~~~~~~~~P~LyIYS~~D~lVP~~~V 220 (409)
+. .-++..+. ..|.. ..+||.. ...-...++|.|+|+|++|+++|.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~-~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~ 317 (388)
T PLN02511 239 FAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKS-VDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGI 317 (388)
T ss_pred HHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCC-HHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccC
Confidence 00 00000000 01111 1223321 111235779999999999999998765
Q ss_pred H-HHHHHHHhCCCceEEEEcCCCccchhhccChHH------HHHHHHHHHHHHhh
Q 015317 221 Y-NFAQRLCDLGADVKLVKWNSSPHVGHYRHYPID------YKAAVTELLGKAGA 268 (409)
Q Consensus 221 e-~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPee------Y~~aV~~Fl~~~~~ 268 (409)
. +.++ ....++++.+++++|++++.. |+. +.+.|.+|++....
T Consensus 318 ~~~~~~----~~p~~~l~~~~~gGH~~~~E~-p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 318 PREDIK----ANPNCLLIVTPSGGHLGWVAG-PEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred cHhHHh----cCCCEEEEECCCcceeccccC-CCCCCCCccHHHHHHHHHHHHHH
Confidence 3 2222 223588999999999998854 544 47889999987543
No 29
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.82 E-value=6.5e-07 Score=84.23 Aligned_cols=220 Identities=15% Similarity=0.174 Sum_probs=114.9
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCc-hh--hhHHHHHHHHHHHHHhcCCCCcEEEEEccC
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFP-EK--AESLALDVLKELVEELKFGPCPVVFASFSG 95 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p-~~--~~~~a~~vL~~L~~~~~~~~~pIl~H~FSn 95 (409)
.++||+||||.+... . -.+...+...+|+|+.++.+....-.+ +. ....+.+++. +++.... .++++-|+|+
T Consensus 16 ~~~iv~lhG~~~~~~-~-~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~-~l~~l~~--~~~~lvGhS~ 90 (255)
T PRK10673 16 NSPIVLVHGLFGSLD-N-LGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLD-TLDALQI--EKATFIGHSM 90 (255)
T ss_pred CCCEEEECCCCCchh-H-HHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHH-HHHHcCC--CceEEEEECH
Confidence 589999999977543 2 233333345679999998875321111 11 1245555554 3444432 4599999999
Q ss_pred cHHHHHHHHHHHHhhhhhccccccchhccccCceEEEe-cCCCCCccchhhhh-hh-hcc-ccccCCCChhHHHHHHHHH
Q 015317 96 GPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIY-DSSPVDFTSDLGAR-FA-VHP-SVLNMSHPPRLVSRIANGI 171 (409)
Q Consensus 96 GG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~-DS~P~~~~~~~g~~-~a-l~~-ai~~~p~~~~lv~~~~~~i 171 (409)
||...+..+.+ ...+|+++|+ |++|.......... +. +.. .............++...+
T Consensus 91 Gg~va~~~a~~-----------------~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PRK10673 91 GGKAVMALTAL-----------------APDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHL 153 (255)
T ss_pred HHHHHHHHHHh-----------------CHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhc
Confidence 99754333211 1236777665 55554432110000 00 000 0000000000000110000
Q ss_pred H-HhHhHHhhhhc-----cchhhHHHH---Hhh---ccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc
Q 015317 172 A-SGLDAFFLNRF-----ESHRAEYWQ---TLY---SSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW 239 (409)
Q Consensus 172 ~-~~l~~l~~~~f-----~~~~~~~~~---~L~---~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f 239 (409)
. .....+....+ .......|. .+. .....++|.|+|+|+.|.+++.+..+.+.+... +++.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~ 229 (255)
T PRK10673 154 NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP----QARAHVI 229 (255)
T ss_pred CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC----CcEEEEe
Confidence 0 00000000000 000111121 111 112456899999999999999888887766543 4688889
Q ss_pred CCCccchhhccChHHHHHHHHHHHHH
Q 015317 240 NSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 240 ~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
+++.|.-+ ..+|+++.+.|.+|++.
T Consensus 230 ~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 230 AGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 99999754 57799999999999974
No 30
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.81 E-value=9.1e-07 Score=83.70 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=51.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+|++++|.++|.+.++++.+..+ .++.+.++++.|.-++ .+|+++.+.|.+|++
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 356899999999999999999888876654 3577888999998664 579999999999984
No 31
>PRK06489 hypothetical protein; Provisional
Probab=98.81 E-value=3.3e-07 Score=92.58 Aligned_cols=63 Identities=25% Similarity=0.233 Sum_probs=51.6
Q ss_pred CCCCCEEEEecCCCCccChHHH--HHHHHHHHhCCCceEEEEcCCC----ccchhhccChHHHHHHHHHHHHHHh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVI--YNFAQRLCDLGADVKLVKWNSS----PHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~V--e~~a~~~r~~G~~V~~~~f~dS----~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
..++|.|+|+|+.|.++|.+.. +.+++... +.+.+.++++ .|+-+ .+|++|.++|.+|++...
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 4578999999999999999875 56655543 3578889996 99875 699999999999998653
No 32
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.80 E-value=4.8e-07 Score=88.50 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=50.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
...+|.|+|+|+.|.++|.+. +++.+..... ..+..+.++++.|.-| -.+|++..+.|.+|+++
T Consensus 237 ~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 237 RWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFLQ-EDSGEELAEAVLEFIRA 300 (302)
T ss_pred cCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccch-hhChHHHHHHHHHHHhc
Confidence 567899999999999999876 6666655432 1244678999999965 58889999999999975
No 33
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.79 E-value=1.8e-07 Score=101.58 Aligned_cols=222 Identities=15% Similarity=0.123 Sum_probs=133.8
Q ss_pred eeeeccCC-CCC--C-CcEEEEecccCChH-HHHHHHHHHHHHcCCcEEEEccccccccCc--------hhh---hHHHH
Q 015317 8 YYWGRKER-GGR--R-EGIVVVFAWMSSEE-RQLKRFVQLYSSLGWNSLICHSQFLNMFFP--------EKA---ESLAL 71 (409)
Q Consensus 8 ~~~~~~~~-~~~--~-kplVVl~GW~gA~~-rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p--------~~~---~~~a~ 71 (409)
.+|-.++. .+. + |.+|.+||-=.+.. .-...+.+.|...||.|+.+..+..+-..- +.+ ..-..
T Consensus 379 ~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~ 458 (620)
T COG1506 379 HGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLI 458 (620)
T ss_pred EEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHH
Confidence 56776643 111 1 34555665422222 235667889999999999987765432211 111 12223
Q ss_pred HHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhc
Q 015317 72 DVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVH 151 (409)
Q Consensus 72 ~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~ 151 (409)
+.+++|.+..-..+..|.+-|+|.||.+++..+.+ .+..++.|...+.++.....+.-
T Consensus 459 ~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~------------------~~~f~a~~~~~~~~~~~~~~~~~---- 516 (620)
T COG1506 459 AAVDALVKLPLVDPERIGITGGSYGGYMTLLAATK------------------TPRFKAAVAVAGGVDWLLYFGES---- 516 (620)
T ss_pred HHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhc------------------CchhheEEeccCcchhhhhcccc----
Confidence 44454443333344679999999999876655432 12467778888766664322110
Q ss_pred cccccCCCChhHHHHHHHHHHHhHhHHhhhhccchhhHHHH--HhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHh
Q 015317 152 PSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQ--TLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCD 229 (409)
Q Consensus 152 ~ai~~~p~~~~lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~--~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~ 229 (409)
....+..+... .. .... ....|+. .++.....++|.|+|||++|.-||.+..+.++++++.
T Consensus 517 -~~~~~~~~~~~--------~~-------~~~~-~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~ 579 (620)
T COG1506 517 -TEGLRFDPEEN--------GG-------GPPE-DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKR 579 (620)
T ss_pred -chhhcCCHHHh--------CC-------Cccc-ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHH
Confidence 00000000000 00 0000 0111221 3444456779999999999999999999999999999
Q ss_pred CCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhh
Q 015317 230 LGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 268 (409)
Q Consensus 230 ~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~ 268 (409)
+|.+|+++.|++..|.=-...|-....+.+.+|+++.+.
T Consensus 580 ~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 580 KGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred cCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 999999999999999865556666677777788877543
No 34
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.79 E-value=7.4e-07 Score=86.64 Aligned_cols=66 Identities=14% Similarity=0.250 Sum_probs=52.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 268 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~ 268 (409)
..++|.|+|+|++|.+++.....+++..... ..+.+.++++.|.-++ .+|++-.++|.+|++++..
T Consensus 226 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 226 TSDVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQE-DSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred cCCCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhh-cCHHHHHHHHHHHHHHhcc
Confidence 3578999999999999966666666544332 3677888999999996 6899999999999987643
No 35
>PLN02965 Probable pheophorbidase
Probab=98.79 E-value=1.1e-06 Score=83.94 Aligned_cols=63 Identities=10% Similarity=0.052 Sum_probs=54.3
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
..++|.|+|+|++|.++|.+..+.+++... ..+.+.+++++|.-|+ .+|++..++|.+|++..
T Consensus 191 ~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 191 AEKVPRVYIKTAKDNLFDPVRQDVMVENWP----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred cCCCCEEEEEcCCCCCCCHHHHHHHHHhCC----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHHh
Confidence 367899999999999999988888877554 2577889999999887 89999999999998764
No 36
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.76 E-value=3.1e-07 Score=87.23 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=51.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
...+|.|+|+|+.|.++|.+..+.+.+... ..+...+++++|.-++ .+|++..++|.+|-++
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHHHhcc
Confidence 467899999999999999988776666543 3578889999998777 7999999999998654
No 37
>PRK10985 putative hydrolase; Provisional
Probab=98.74 E-value=1.1e-06 Score=87.59 Aligned_cols=219 Identities=16% Similarity=0.166 Sum_probs=115.7
Q ss_pred CCcEEEEecccCCh-HHHHHHHHHHHHHcCCcEEEEccccccccCchh--------hhHHHHHHHHHHHHHhcCCCCcEE
Q 015317 19 REGIVVVFAWMSSE-ERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEK--------AESLALDVLKELVEELKFGPCPVV 89 (409)
Q Consensus 19 ~kplVVl~GW~gA~-~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~--------~~~~a~~vL~~L~~~~~~~~~pIl 89 (409)
.+.||++|||.++. ...+.+.++.+.+.||+|++++.+... ..|.. ....+..+++++.+..+ ..+++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g-~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~--~~~~~ 134 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCS-GEPNRLHRIYHSGETEDARFFLRWLQREFG--HVPTA 134 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCC-CCccCCcceECCCchHHHHHHHHHHHHhCC--CCCEE
Confidence 46789999998753 346677888899999999998765421 11110 11223345566655443 34699
Q ss_pred EEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChh-HHHHHH
Q 015317 90 FASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPR-LVSRIA 168 (409)
Q Consensus 90 ~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~-lv~~~~ 168 (409)
+.|+||||.+.+..+.+ . . -..++++.|.=|+|.+..... ..+. ....+. ..+ +...+.
T Consensus 135 ~vG~S~GG~i~~~~~~~----~-----~------~~~~~~~~v~i~~p~~~~~~~-~~~~--~~~~~~--~~~~l~~~l~ 194 (324)
T PRK10985 135 AVGYSLGGNMLACLLAK----E-----G------DDLPLDAAVIVSAPLMLEACS-YRME--QGFSRV--YQRYLLNLLK 194 (324)
T ss_pred EEEecchHHHHHHHHHh----h-----C------CCCCccEEEEEcCCCCHHHHH-HHHh--hhHHHH--HHHHHHHHHH
Confidence 99999999753333222 0 0 012477777777786643210 0000 000000 000 000000
Q ss_pred HHHH-----------------------HhHhHHhhh---hccchhhHHHHH---hhccCCCCCCEEEEecCCCCccChHH
Q 015317 169 NGIA-----------------------SGLDAFFLN---RFESHRAEYWQT---LYSSVRFGAPYLILCSEDDDLAPYQV 219 (409)
Q Consensus 169 ~~i~-----------------------~~l~~l~~~---~f~~~~~~~~~~---L~~~~~~~~P~LyIYS~~D~lVP~~~ 219 (409)
..+. .-++..+.. .+.. ...|+.. ...-...++|.|+|+|++|.++|.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~-~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~ 273 (324)
T PRK10985 195 ANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFAD-AIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEV 273 (324)
T ss_pred HHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCC-HHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhh
Confidence 0000 000101100 1111 1122211 01113557899999999999999988
Q ss_pred HHHHHHHHHhCCCceEEEEcCCCccchhhccC--hHHHH--HHHHHHHHH
Q 015317 220 IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY--PIDYK--AAVTELLGK 265 (409)
Q Consensus 220 Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~h--PeeY~--~aV~~Fl~~ 265 (409)
++.+.+. -..++.+.+++++|+.++... +.++| +.|-+|++.
T Consensus 274 ~~~~~~~----~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 274 IPKPESL----PPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred ChHHHHh----CCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 8765332 125788899999999998642 22232 456666654
No 38
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.72 E-value=3.1e-07 Score=85.95 Aligned_cols=165 Identities=19% Similarity=0.199 Sum_probs=94.9
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccc---cCchhh---h---------HHHH---HHHHHHHHH
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNM---FFPEKA---E---------SLAL---DVLKELVEE 80 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~---~~p~~~---~---------~~a~---~vL~~L~~~ 80 (409)
.+.|||++.|.|-. .++..+++.+.+.||.|++++.-...- ..+... . .... ..+++|.+.
T Consensus 14 ~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 14 RPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp EEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 57899999999977 678999999999999999876521111 111110 0 1111 223333332
Q ss_pred hcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCC
Q 015317 81 LKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHP 160 (409)
Q Consensus 81 ~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~ 160 (409)
......+|.+-|||+||...+.. .. . . ..+++.|.=-+ . ..
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~----a~-~------------~-~~~~a~v~~yg----------------~-----~~ 133 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLL----AA-R------------D-PRVDAAVSFYG----------------G-----SP 133 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHH----HC-C------------T-TTSSEEEEES-----------------S-----SS
T ss_pred cccCCCcEEEEEEecchHHhhhh----hh-h------------c-cccceEEEEcC----------------C-----CC
Confidence 22223579999999999753321 11 0 0 12333321110 0 00
Q ss_pred hhHHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcC
Q 015317 161 PRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWN 240 (409)
Q Consensus 161 ~~lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~ 240 (409)
+.. .+......++|.|++++++|+++|.+.++++.+.+++.|.+++.+.|+
T Consensus 134 ~~~-----------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 184 (218)
T PF01738_consen 134 PPP-----------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYP 184 (218)
T ss_dssp GGG-----------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEET
T ss_pred CCc-----------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECC
Confidence 000 000011235799999999999999999999999999999999999999
Q ss_pred CCccchhhccCh
Q 015317 241 SSPHVGHYRHYP 252 (409)
Q Consensus 241 dS~HV~H~r~hP 252 (409)
++.|-=..+..+
T Consensus 185 ga~HgF~~~~~~ 196 (218)
T PF01738_consen 185 GAGHGFANPSRP 196 (218)
T ss_dssp T--TTTTSTTST
T ss_pred CCcccccCCCCc
Confidence 999986666655
No 39
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.69 E-value=2.8e-06 Score=82.80 Aligned_cols=223 Identities=15% Similarity=0.048 Sum_probs=116.1
Q ss_pred CCcEEEEecccC---ChHHHHHHHHHHHHHcCCcEEEEcccccccc-----CchhhhHHHHHHHHHHHHHhcCCCCcEEE
Q 015317 19 REGIVVVFAWMS---SEERQLKRFVQLYSSLGWNSLICHSQFLNMF-----FPEKAESLALDVLKELVEELKFGPCPVVF 90 (409)
Q Consensus 19 ~kplVVl~GW~g---A~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~-----~p~~~~~~a~~vL~~L~~~~~~~~~pIl~ 90 (409)
.+++|+++|+.+ +..+.....++.+.+.||+++.++.+...-- ..+........+++++.+..+ .-.+|++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l 104 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAP-HLRRIVA 104 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-CCCcEEE
Confidence 578999999874 2334456678888999999999887643210 011111122334444443322 1135999
Q ss_pred EEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhh-hhhhccccccCCCChhHHHH---
Q 015317 91 ASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGA-RFAVHPSVLNMSHPPRLVSR--- 166 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~-~~al~~ai~~~p~~~~lv~~--- 166 (409)
.|+|+||...+..... ..+|+|+|+-|++......... ............ ...+...
T Consensus 105 ~G~S~Gg~~a~~~a~~------------------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 165 (274)
T TIGR03100 105 WGLCDAASAALLYAPA------------------DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS-ADFWRKLLSG 165 (274)
T ss_pred EEECHHHHHHHHHhhh------------------CCCccEEEEECCccCCcccchHHHHHHHHHHHHhC-hHHHHHhcCC
Confidence 9999999643322100 1379999999976442210000 000000000000 0000000
Q ss_pred ------HHHHHHHhHhHHhhh----hccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHH--HHHHHHh-CC-C
Q 015317 167 ------IANGIASGLDAFFLN----RFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYN--FAQRLCD-LG-A 232 (409)
Q Consensus 167 ------~~~~i~~~l~~l~~~----~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~--~a~~~r~-~G-~ 232 (409)
+...+...+...... .........++.|. ..+.|.|++||..|..++ +..+. ..+.+++ .+ .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~ 241 (274)
T TIGR03100 166 EVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLE---RFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDP 241 (274)
T ss_pred CccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHH---hcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcC
Confidence 000011000000000 00001112223332 235899999999999863 22211 0022222 22 4
Q ss_pred ceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 233 DVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 233 ~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
.|+.+.++++.|+-+....+++..+.|.+||++
T Consensus 242 ~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 242 GIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred CeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 689999999999998999999999999999963
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.69 E-value=1.1e-06 Score=88.04 Aligned_cols=65 Identities=22% Similarity=0.229 Sum_probs=54.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCC-CccchhhccChHHHHHHHHHHHHHHh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS-SPHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d-S~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
..++|.|+|+|+.|.++|.+.++++++.... ..+.+.+++ ++|.-++ .+|++..+.|.+|++++.
T Consensus 275 ~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH~~~l-E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 275 AIRVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGHDAFL-KETDRIDAILTTALRSTG 340 (343)
T ss_pred cCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccHHHHh-cCHHHHHHHHHHHHHhcc
Confidence 4678999999999999999998888776532 367888984 9998887 589999999999998754
No 41
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.68 E-value=3.2e-06 Score=85.64 Aligned_cols=67 Identities=19% Similarity=0.251 Sum_probs=53.0
Q ss_pred CCCCCEEEEecCCCCccChHH-HHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQV-IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~-Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
..++|.|+|+|+.|.++|.+. +.++++.+.+.-.+++++.++++.|.-|+ .+|++..+.|.+|+++.
T Consensus 290 ~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 290 RISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQL 357 (360)
T ss_pred hcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHhc
Confidence 456899999999999999874 33444444443335889999999999775 67999999999999864
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.68 E-value=2.9e-06 Score=83.51 Aligned_cols=57 Identities=21% Similarity=0.264 Sum_probs=45.1
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
++|.|+|+|+.|.++|.+..+++++... +.+++.++++.|.. .+|+.. ++|.+|++.
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~---~~~~~~-~~i~~~~~~ 304 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSA---FDPNNL-AALVHALET 304 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCC---CChHHH-HHHHHHHHH
Confidence 4799999999999999999998888654 36778888887775 577766 666666654
No 43
>PRK11071 esterase YqiA; Provisional
Probab=98.67 E-value=2.5e-06 Score=79.12 Aligned_cols=184 Identities=10% Similarity=0.062 Sum_probs=100.8
Q ss_pred CcEEEEecccCChHHHH-HHHHHHHHHc--CCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCc
Q 015317 20 EGIVVVFAWMSSEERQL-KRFVQLYSSL--GWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGG 96 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl-~KYa~lY~~l--G~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnG 96 (409)
++||+||||.++....- ....+...+. +++++.++.+. +++ .. .+.+.++.++... .++++.|+|+|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g----~~~---~~-~~~l~~l~~~~~~--~~~~lvG~S~G 71 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPP----YPA---DA-AELLESLVLEHGG--DPLGLVGSSLG 71 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCC----CHH---HH-HHHHHHHHHHcCC--CCeEEEEECHH
Confidence 57999999988665321 1233444454 56666666553 232 22 2345556655443 36999999999
Q ss_pred HHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCCh-hHHHHHHHHHHHhH
Q 015317 97 PKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPP-RLVSRIANGIASGL 175 (409)
Q Consensus 97 G~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~-~lv~~~~~~i~~~l 175 (409)
|...+....+ .+.+.++++.+ .++...+.. +. .....+..+ .+ .+..
T Consensus 72 g~~a~~~a~~-------------------~~~~~vl~~~~-~~~~~~~~~-~~---~~~~~~~~~~~~--~~~~------ 119 (190)
T PRK11071 72 GYYATWLSQC-------------------FMLPAVVVNPA-VRPFELLTD-YL---GENENPYTGQQY--VLES------ 119 (190)
T ss_pred HHHHHHHHHH-------------------cCCCEEEECCC-CCHHHHHHH-hc---CCcccccCCCcE--EEcH------
Confidence 9754432211 01345666554 333221111 10 000001000 00 0000
Q ss_pred hHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHH
Q 015317 176 DAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDY 255 (409)
Q Consensus 176 ~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY 255 (409)
-++...... .+.. ...+.|.++|+|++|++||++...++++.+ +....+|+.|.- .+.++|
T Consensus 120 --~~~~d~~~~------~~~~-i~~~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH~f---~~~~~~ 180 (190)
T PRK11071 120 --RHIYDLKVM------QIDP-LESPDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNHAF---VGFERY 180 (190)
T ss_pred --HHHHHHHhc------CCcc-CCChhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCcch---hhHHHh
Confidence 000000000 0111 224568889999999999999999999953 334568888874 777999
Q ss_pred HHHHHHHHH
Q 015317 256 KAAVTELLG 264 (409)
Q Consensus 256 ~~aV~~Fl~ 264 (409)
++.+.+|++
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 999999975
No 44
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.65 E-value=3.4e-06 Score=82.41 Aligned_cols=58 Identities=19% Similarity=0.158 Sum_probs=47.6
Q ss_pred CCCEEEEecCCCCccChHH-HHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQV-IYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 263 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~-Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl 263 (409)
.+|.|+|+|+.|.++|+.. .+.+.+... ..+.+.+++++|.-++ .+|++..+.|.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip----~~~~~~i~~aGH~~~~-e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP----DHVLVELPNAKHFIQE-DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC----CCeEEEcCCCcccccc-cCHHHHHHHHHHhc
Confidence 6899999999999987664 455555444 3688899999999777 79999999999996
No 45
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.63 E-value=6.4e-06 Score=84.96 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=52.3
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhhhhH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQ 272 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~~~~ 272 (409)
..++|.|+|||+.|.+++ +..++..+.. +..++.+.++++.|.-+ -.+|+++.++|.+|++.....-++
T Consensus 323 ~I~vP~liI~G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~~-~E~P~~f~~~l~~~~~~~~~~~~~ 391 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFVF-LDNPSGFHSAVLYACRKYLSPDRE 391 (402)
T ss_pred cCCCCEEEEEeCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCeee-ccCHHHHHHHHHHHHHHhccCCch
Confidence 457899999999998876 5555544332 33578899999999855 459999999999999976555443
No 46
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.60 E-value=2.5e-06 Score=85.87 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=51.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccC--hHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~h--PeeY~~aV~~Fl~~ 265 (409)
..++|.|+++|++|.++|++.++.+++.... .+++.+.++ +.|.+.+... +++=|.+|.+|+++
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 4578999999999999999999999887653 356666776 8999988765 47888889899864
No 47
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.59 E-value=5.9e-06 Score=82.12 Aligned_cols=226 Identities=14% Similarity=0.110 Sum_probs=122.9
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccC-chhh--h--HHHHHHHHHHHHHhc--CCCCcEEEEE
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFF-PEKA--E--SLALDVLKELVEELK--FGPCPVVFAS 92 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~-p~~~--~--~~a~~vL~~L~~~~~--~~~~pIl~H~ 92 (409)
..|||+||-.....+ ....++.+...||.|+.++-+....-. .+.+ . +.-.+.++.+++... ....|+++-|
T Consensus 35 g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~g 113 (298)
T COG2267 35 GVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLG 113 (298)
T ss_pred cEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 456666666543333 344566789999999999886542221 1211 0 111222344444433 2457899999
Q ss_pred ccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccc-hhhhhhh--hcccccc----CCCCh----
Q 015317 93 FSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS-DLGARFA--VHPSVLN----MSHPP---- 161 (409)
Q Consensus 93 FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~-~~g~~~a--l~~ai~~----~p~~~---- 161 (409)
.||||..++..+.+ ...+|.|+|+=|+--.... .....+. ....+.+ .+..+
T Consensus 114 HSmGg~Ia~~~~~~-----------------~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (298)
T COG2267 114 HSMGGLIALLYLAR-----------------YPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLE 176 (298)
T ss_pred eCcHHHHHHHHHHh-----------------CCccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCccccc
Confidence 99999876555433 1158999999773222221 0001000 0000000 00000
Q ss_pred h-HHHHHHHHHHHhHhHHhhh----hccchhhHHH-H---------HhhccCCCCCCEEEEecCCCCccCh-HHHHHHHH
Q 015317 162 R-LVSRIANGIASGLDAFFLN----RFESHRAEYW-Q---------TLYSSVRFGAPYLILCSEDDDLAPY-QVIYNFAQ 225 (409)
Q Consensus 162 ~-lv~~~~~~i~~~l~~l~~~----~f~~~~~~~~-~---------~L~~~~~~~~P~LyIYS~~D~lVP~-~~Ve~~a~ 225 (409)
. ...++..-- .....|.. .+... ...| . ...+......|.|+++|++|.+|+. +...++++
T Consensus 177 ~~~~~~~sr~~--~~~~~~~~dP~~~~~~~-~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~ 253 (298)
T COG2267 177 GVLTDDLSRDP--AEVAAYEADPLIGVGGP-VSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFE 253 (298)
T ss_pred CcCcchhhcCH--HHHHHHhcCCccccCCc-cHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHH
Confidence 0 000000000 00000000 00000 0011 0 1112345678999999999999994 66666666
Q ss_pred HHHhCCCceEEEEcCCCccchhhccCh--HHHHHHHHHHHHHHhh
Q 015317 226 RLCDLGADVKLVKWNSSPHVGHYRHYP--IDYKAAVTELLGKAGA 268 (409)
Q Consensus 226 ~~r~~G~~V~~~~f~dS~HV~H~r~hP--eeY~~aV~~Fl~~~~~ 268 (409)
.+... ++++..++++-|=-+...+. +++++.+.+|+.+...
T Consensus 254 ~~~~~--~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 254 RAGSP--DKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred hcCCC--CceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 55432 48999999999999999999 9999999999987543
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.58 E-value=6.4e-06 Score=82.73 Aligned_cols=62 Identities=18% Similarity=0.203 Sum_probs=54.5
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..|.|+|+|++|.+++++..+++++.+... +++.+.++++.|.-+...++++..+.|.+|++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 589999999999999999999988865432 57888999999999988888999999999985
No 49
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.57 E-value=8.3e-06 Score=81.50 Aligned_cols=233 Identities=19% Similarity=0.242 Sum_probs=128.7
Q ss_pred eeeeccCCCCC-CCcEEEEecccCCh-HHHHHHHHHHHHHcCCcEEEEcccccc-------ccCchhhhHHHHHHHHHHH
Q 015317 8 YYWGRKERGGR-REGIVVVFAWMSSE-ERQLKRFVQLYSSLGWNSLICHSQFLN-------MFFPEKAESLALDVLKELV 78 (409)
Q Consensus 8 ~~~~~~~~~~~-~kplVVl~GW~gA~-~rhl~KYa~lY~~lG~nvLvv~s~~~~-------~~~p~~~~~~a~~vL~~L~ 78 (409)
..|.-.+. +. .+-||++||-.|+. ..++.--....+++||.+++.+.+.-. -++......-+..+++++.
T Consensus 64 ldw~~~p~-~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~ 142 (345)
T COG0429 64 LDWSEDPR-AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLK 142 (345)
T ss_pred EeeccCcc-ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHH
Confidence 67884431 22 34688888888854 445666677888999999987654310 0111110122334566665
Q ss_pred HHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCC
Q 015317 79 EELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMS 158 (409)
Q Consensus 79 ~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p 158 (409)
.... ++|+.+-|||.||.+....+.+ . + ...++.+-+.=|.|.|+. ..+..+....+. ++
T Consensus 143 ~~~~--~r~~~avG~SLGgnmLa~ylge----e-g----------~d~~~~aa~~vs~P~Dl~-~~~~~l~~~~s~-~l- 202 (345)
T COG0429 143 ARFP--PRPLYAVGFSLGGNMLANYLGE----E-G----------DDLPLDAAVAVSAPFDLE-ACAYRLDSGFSL-RL- 202 (345)
T ss_pred HhCC--CCceEEEEecccHHHHHHHHHh----h-c----------cCcccceeeeeeCHHHHH-HHHHHhcCchhh-hh-
Confidence 5443 4679999999999752222322 1 1 113566777778887763 112222211110 00
Q ss_pred CChh-HHHHHHHHHHHhH------------------------hHHhh-h--hccchhhHHHHHhhc---cCCCCCCEEEE
Q 015317 159 HPPR-LVSRIANGIASGL------------------------DAFFL-N--RFESHRAEYWQTLYS---SVRFGAPYLIL 207 (409)
Q Consensus 159 ~~~~-lv~~~~~~i~~~l------------------------~~l~~-~--~f~~~~~~~~~~L~~---~~~~~~P~LyI 207 (409)
..+ +...+...+..-+ +.++. + +|.. ..+||++..+ -..+.+|.|+|
T Consensus 203 -y~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~d-a~dYYr~aSs~~~L~~Ir~PtLii 280 (345)
T COG0429 203 -YSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFAD-AEDYYRQASSLPLLPKIRKPTLII 280 (345)
T ss_pred -hHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCc-HHHHHHhccccccccccccceEEE
Confidence 011 1111111111111 11110 0 1111 2345554221 24677899999
Q ss_pred ecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhcc---ChH-HHHHHHHHHHHHH
Q 015317 208 CSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRH---YPI-DYKAAVTELLGKA 266 (409)
Q Consensus 208 YS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~---hPe-eY~~aV~~Fl~~~ 266 (409)
|+++|++++.+.|.+.... ..-.|.++..+..+|||-+.. ||. ==+++|-+|++..
T Consensus 281 ~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 9999999999999887764 234699999999999998873 443 1134566666543
No 50
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.56 E-value=4.4e-06 Score=81.39 Aligned_cols=60 Identities=10% Similarity=0.096 Sum_probs=48.1
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
.+|.|||++++|.++|++..+.+++... | .+.+.++ +.|.-++ .+|++-.+.|.++...+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~--~~~~~l~-~gH~p~l-s~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--P--SQVYELE-SDHSPFF-STPFLLFGLLIKAAASV 270 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--c--cEEEEEC-CCCCccc-cCHHHHHHHHHHHHHHh
Confidence 5799999999999999999898887654 2 2555665 8898776 89999988888876543
No 51
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.56 E-value=3.4e-06 Score=79.17 Aligned_cols=61 Identities=23% Similarity=0.326 Sum_probs=49.5
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
+.|.+++||++|++||.+..++.++.+++.|.+|+...|++..|-- . .+..+.+.+||++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i----~-~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI----S-PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC----C-HHHHHHHHHHHhhh
Confidence 5799999999999999999999999999999999999999999953 3 45567799999874
No 52
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.55 E-value=1.1e-05 Score=78.66 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=40.9
Q ss_pred CCCEEEEecCCCCccCh-HHHHHHHHHHHhCCCceEEEEcCCCccc
Q 015317 201 GAPYLILCSEDDDLAPY-QVIYNFAQRLCDLGADVKLVKWNSSPHV 245 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~-~~Ve~~a~~~r~~G~~V~~~~f~dS~HV 245 (409)
..|.+++||+.|.++|. ...+.+.+.+++.|.+++...+++..|.
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~ 256 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHS 256 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 45888889999999999 6788999999999999999999999998
No 53
>PLN02578 hydrolase
Probab=98.55 E-value=1.5e-05 Score=80.46 Aligned_cols=60 Identities=22% Similarity=0.249 Sum_probs=49.0
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+|+|+.|.++|.+..+++.+...+ .+.+.+ ++.|+-|. .+|+++.++|.+|++
T Consensus 294 ~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~----a~l~~i-~~GH~~~~-e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 294 KLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD----TTLVNL-QAGHCPHD-EVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CEEEEe-CCCCCccc-cCHHHHHHHHHHHHh
Confidence 4678999999999999999998888776542 344555 58999764 699999999999986
No 54
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.54 E-value=9.2e-06 Score=97.12 Aligned_cols=67 Identities=18% Similarity=0.293 Sum_probs=52.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhC---C-----CceEEEEcCCCccchhhccChHHHHHHHHHHHHHHh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDL---G-----ADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~---G-----~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
..++|.|+|+|++|.++| +..+++.+...+. + ..++.+.+++++|.-|+ .+|+++.+.|.+|+++..
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-E~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-ENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH-HCHHHHHHHHHHHHHhcc
Confidence 456899999999999886 5556665554321 0 12688999999999887 789999999999999754
No 55
>PLN02442 S-formylglutathione hydrolase
Probab=98.50 E-value=1.3e-05 Score=78.72 Aligned_cols=63 Identities=21% Similarity=0.113 Sum_probs=52.0
Q ss_pred CCCCCEEEEecCCCCccChH-HHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhhhh
Q 015317 199 RFGAPYLILCSEDDDLAPYQ-VIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYS 271 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~-~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~~~ 271 (409)
..+.|.|+++|+.|.++|.. ..+.+++.+++.|.+++...+++..|.- ..+.+|+++...-+.
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~----------~~~~~~i~~~~~~~~ 278 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSY----------FFIATFIDDHINHHA 278 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccH----------HHHHHHHHHHHHHHH
Confidence 45679999999999999975 4788999999999999999999999973 477788876654443
No 56
>PRK10162 acetyl esterase; Provisional
Probab=98.48 E-value=2.8e-05 Score=77.64 Aligned_cols=206 Identities=13% Similarity=0.096 Sum_probs=108.6
Q ss_pred CCcEEEEec--ccCChHHHHHHHHHHHHH-cCCcEEEEcccccc-ccCchhhhHHHHHHHHHHHHH---hcCCCCcEEEE
Q 015317 19 REGIVVVFA--WMSSEERQLKRFVQLYSS-LGWNSLICHSQFLN-MFFPEKAESLALDVLKELVEE---LKFGPCPVVFA 91 (409)
Q Consensus 19 ~kplVVl~G--W~gA~~rhl~KYa~lY~~-lG~nvLvv~s~~~~-~~~p~~~~~~a~~vL~~L~~~---~~~~~~pIl~H 91 (409)
.+.||.+|| |.......-........+ .|+.|+.++-+..- .-+|.. ..-+..+++++.+. ....+..|++-
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~-~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQA-IEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCc-HHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 456888888 543332223445555544 69999888765431 112221 23344566666543 23234579999
Q ss_pred EccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHH
Q 015317 92 SFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGI 171 (409)
Q Consensus 92 ~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i 171 (409)
|.|+||..++....++ ... ..-...++++|+-++..+......... . ..........-..|+..
T Consensus 160 G~SaGG~la~~~a~~~-~~~----------~~~~~~~~~~vl~~p~~~~~~~~s~~~-~--~~~~~~l~~~~~~~~~~-- 223 (318)
T PRK10162 160 GDSAGAMLALASALWL-RDK----------QIDCGKVAGVLLWYGLYGLRDSVSRRL-L--GGVWDGLTQQDLQMYEE-- 223 (318)
T ss_pred EECHHHHHHHHHHHHH-Hhc----------CCCccChhheEEECCccCCCCChhHHH-h--CCCccccCHHHHHHHHH--
Confidence 9999998655543332 110 001246888998886555421100000 0 00000000011111111
Q ss_pred HHhHhHHhhhhccchhhHHHHHhhccC-CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhc
Q 015317 172 ASGLDAFFLNRFESHRAEYWQTLYSSV-RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYR 249 (409)
Q Consensus 172 ~~~l~~l~~~~f~~~~~~~~~~L~~~~-~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r 249 (409)
.|+..-......+...+.... ..-.|.++++++.|.+.+ +.+.+++.+++.|.+|+...+++..|.-...
T Consensus 224 ------~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~ 294 (318)
T PRK10162 224 ------AYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHY 294 (318)
T ss_pred ------HhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhc
Confidence 121110000000111111101 111489999999999974 7899999999999999999999999975433
No 57
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.46 E-value=6.1e-06 Score=82.19 Aligned_cols=225 Identities=15% Similarity=0.162 Sum_probs=127.0
Q ss_pred CCcEEEEecccCChHHHHHHHH-HHHHHcCCcEEEEccccccccCchh----hhHHHHHHHHHHHHHhcC-CCCcEEEEE
Q 015317 19 REGIVVVFAWMSSEERQLKRFV-QLYSSLGWNSLICHSQFLNMFFPEK----AESLALDVLKELVEELKF-GPCPVVFAS 92 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa-~lY~~lG~nvLvv~s~~~~~~~p~~----~~~~a~~vL~~L~~~~~~-~~~pIl~H~ 92 (409)
.+|+|++||-.|+... -.-.. .+=++++-.+..++.+.... .|.. ...+|.++...+-..... ...+++++|
T Consensus 52 ~Pp~i~lHGl~GS~~N-w~sv~k~Ls~~l~~~v~~vd~RnHG~-Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 52 APPAIILHGLLGSKEN-WRSVAKNLSRKLGRDVYAVDVRNHGS-SPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCceEEecccccCCCC-HHHHHHHhcccccCceEEEecccCCC-CccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 7999999999998754 33333 35566778887776655321 1211 234565655444332211 346799999
Q ss_pred ccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhcccccc---C----CCChhHHH
Q 015317 93 FSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLN---M----SHPPRLVS 165 (409)
Q Consensus 93 FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~---~----p~~~~lv~ 165 (409)
+|||| ..+..+..+.. + ....+.+|.|.+|+......+..+.+-.++.. . +.+.-++.
T Consensus 130 HsmGG-~~~~m~~t~~~-----p---------~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~ 194 (315)
T KOG2382|consen 130 HSMGG-VKVAMAETLKK-----P---------DLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALK 194 (315)
T ss_pred cCcch-HHHHHHHHHhc-----C---------cccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHH
Confidence 99999 22332222211 1 12678999999996332211211111111111 1 11111111
Q ss_pred HHHHHHH-HhHhHHhhhhcc--c------------h---------hhHHHHHhhccCCCCCCEEEEecCCCCccChHHHH
Q 015317 166 RIANGIA-SGLDAFFLNRFE--S------------H---------RAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIY 221 (409)
Q Consensus 166 ~~~~~i~-~~l~~l~~~~f~--~------------~---------~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve 221 (409)
-+..... .++..+....++ . . ...||..+.+ .+...|.||+++..+..+|.++-.
T Consensus 195 ~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~ 273 (315)
T KOG2382|consen 195 SLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYP 273 (315)
T ss_pred HHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcChhHHH
Confidence 1111000 011111111111 0 0 1223334444 456689999999999999988877
Q ss_pred HHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 222 NFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 222 ~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
.+.+...+ ++.+.+++|+|.=|. ..|++..+.|.+|+++.
T Consensus 274 ~~~~~fp~----~e~~~ld~aGHwVh~-E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 274 RMEKIFPN----VEVHELDEAGHWVHL-EKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHHhccc----hheeecccCCceeec-CCHHHHHHHHHHHhccc
Confidence 77766553 888999999999885 67999999999999864
No 58
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.44 E-value=3.5e-05 Score=78.66 Aligned_cols=68 Identities=24% Similarity=0.245 Sum_probs=58.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc-CCCccchhhccChHHHHHHHHHHHHHHh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW-NSSPHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f-~dS~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
..++|.|+|+++.|.++|.+..+++++.....+.+++.+.+ ++++|..++ .+|+++.++|.+||+++.
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhhh
Confidence 45789999999999999999999999988876666777766 599999665 899999999999998754
No 59
>PRK05855 short chain dehydrogenase; Validated
Probab=98.40 E-value=1.8e-05 Score=83.61 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=50.8
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhh
Q 015317 200 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGA 268 (409)
Q Consensus 200 ~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~ 268 (409)
.++|.|+|+|++|.++|.+..+.+.+... ..+.+.++ +.|..|+ .+|+++.+.|.+|+++...
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHWLPM-SHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCcchh-hChhHHHHHHHHHHHhccC
Confidence 57899999999999999998887765433 24556665 6899884 6899999999999987543
No 60
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.40 E-value=1.8e-05 Score=79.66 Aligned_cols=65 Identities=22% Similarity=0.198 Sum_probs=53.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEE-EcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLV-KWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~-~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
..++|.|+|+++.|.++|.+.++++++...+....|+.+ .++++.|..++ .+|+++.++|.+|++
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 456899999999999999999999999887543333332 46789999887 689999999999974
No 61
>PRK07581 hypothetical protein; Validated
Probab=98.39 E-value=2.7e-05 Score=77.54 Aligned_cols=65 Identities=15% Similarity=0.005 Sum_probs=54.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCC-CccchhhccChHHHHHHHHHHHHHHhh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS-SPHVGHYRHYPIDYKAAVTELLGKAGA 268 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d-S~HV~H~r~hPeeY~~aV~~Fl~~~~~ 268 (409)
..++|.|+|+|+.|.++|.+..+.+++... +.+.+.+++ ++|..++ ..|+++.+.|++|+++.+.
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip----~a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALIP----NAELRPIESIWGHLAGF-GQNPADIAFIDAALKELLA 338 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHHh
Confidence 356899999999999999999888776553 357788898 8999876 5667799999999998764
No 62
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.35 E-value=2.9e-05 Score=74.74 Aligned_cols=170 Identities=14% Similarity=0.165 Sum_probs=106.9
Q ss_pred eeeeccCCCCCCCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccc-----cccc-------------C-chhhhH
Q 015317 8 YYWGRKERGGRREGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQF-----LNMF-------------F-PEKAES 68 (409)
Q Consensus 8 ~~~~~~~~~~~~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~-----~~~~-------------~-p~~~~~ 68 (409)
-||.+-......+.|||++.|.|-++ |+..+++...+.||.+++.+.-. ...- . +.....
T Consensus 16 ~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (236)
T COG0412 16 AYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLA 94 (236)
T ss_pred EEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHH
Confidence 46775432111378999999999877 89999999999999998864411 0000 0 011112
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhh
Q 015317 69 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARF 148 (409)
Q Consensus 69 ~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~ 148 (409)
.+...+++|..........|.+-|||+||.+.+....+ . +.+++.|.
T Consensus 95 d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~----------~--------~~v~a~v~--------------- 141 (236)
T COG0412 95 DIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR----------A--------PEVKAAVA--------------- 141 (236)
T ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc----------c--------CCccEEEE---------------
Confidence 23344455544332334569999999999764443211 0 01222110
Q ss_pred hhccccccCCCChhHHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHH
Q 015317 149 AVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLC 228 (409)
Q Consensus 149 al~~ai~~~p~~~~lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r 228 (409)
..+ ..... ...+....++|.|+++++.|..+|.+.++.+.++.+
T Consensus 142 -------fyg----------------------~~~~~-------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~ 185 (236)
T COG0412 142 -------FYG----------------------GLIAD-------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALE 185 (236)
T ss_pred -------ecC----------------------CCCCC-------cccccccccCcEEEEecccCCCCChhHHHHHHHHHH
Confidence 000 00000 000112456899999999999999999999999999
Q ss_pred hCCCceEEEEcCCCccchh
Q 015317 229 DLGADVKLVKWNSSPHVGH 247 (409)
Q Consensus 229 ~~G~~V~~~~f~dS~HV~H 247 (409)
+.+.+++.+.|.++.|.=.
T Consensus 186 ~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 186 DAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred hcCCCeeEEEeCCCccccc
Confidence 9988999999999778644
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.34 E-value=8.8e-06 Score=78.73 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=109.3
Q ss_pred EEEEecccCChHHHHHHHHHHHHHc----CCcEEEEccccccc--cCchhh--hHHHHHHHHHHHHHhcCCCCcEEEEEc
Q 015317 22 IVVVFAWMSSEERQLKRFVQLYSSL----GWNSLICHSQFLNM--FFPEKA--ESLALDVLKELVEELKFGPCPVVFASF 93 (409)
Q Consensus 22 lVVl~GW~gA~~rhl~KYa~lY~~l----G~nvLvv~s~~~~~--~~p~~~--~~~a~~vL~~L~~~~~~~~~pIl~H~F 93 (409)
.++|+.-.+|.+ +..-+++|..+ .+|+..++-..... +-|... -..++.+.++|.+... .+.+|++.|+
T Consensus 61 ~~lly~hGNa~D--lgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~ 137 (258)
T KOG1552|consen 61 PTLLYSHGNAAD--LGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG-SPERIILYGQ 137 (258)
T ss_pred eEEEEcCCcccc--hHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC-CCceEEEEEe
Confidence 334444434443 23455666666 56666665544322 223221 1233445566666554 4567999999
Q ss_pred cCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHH
Q 015317 94 SGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIAS 173 (409)
Q Consensus 94 SnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~ 173 (409)
|+|...++. ++. +.++.|+|++|+-.+. .+. +.+-. .+. .|
T Consensus 138 SiGt~~tv~----Las---------------r~~~~alVL~SPf~S~-----~rv-~~~~~------~~~-~~------- 178 (258)
T KOG1552|consen 138 SIGTVPTVD----LAS---------------RYPLAAVVLHSPFTSG-----MRV-AFPDT------KTT-YC------- 178 (258)
T ss_pred cCCchhhhh----Hhh---------------cCCcceEEEeccchhh-----hhh-hccCc------ceE-Ee-------
Confidence 999975322 221 1248999999953221 111 11000 000 00
Q ss_pred hHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH
Q 015317 174 GLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI 253 (409)
Q Consensus 174 ~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe 253 (409)
++. |. .+.+.+..++|+|++||.+|++||+..-.++++.++++ ++-...+++.|+.-.+ ..
T Consensus 179 -~d~-----f~--------~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~~--~~ 239 (258)
T KOG1552|consen 179 -FDA-----FP--------NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIEL--YP 239 (258)
T ss_pred -ecc-----cc--------ccCcceeccCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCccccc--CH
Confidence 010 11 12223456689999999999999999999999998875 6777778999986544 34
Q ss_pred HHHHHHHHHHHHH
Q 015317 254 DYKAAVTELLGKA 266 (409)
Q Consensus 254 eY~~aV~~Fl~~~ 266 (409)
+|...+.+|+...
T Consensus 240 ~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 240 EYIEHLRRFISSV 252 (258)
T ss_pred HHHHHHHHHHHHh
Confidence 6999999998754
No 64
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.29 E-value=6e-05 Score=77.54 Aligned_cols=218 Identities=17% Similarity=0.206 Sum_probs=128.5
Q ss_pred CCcEEEEecccC-ChHHHHHHHHHHHHHcCCcEEEEcccc-----------ccccCchhhhHHHHHHHHHHHHHhcCCCC
Q 015317 19 REGIVVVFAWMS-SEERQLKRFVQLYSSLGWNSLICHSQF-----------LNMFFPEKAESLALDVLKELVEELKFGPC 86 (409)
Q Consensus 19 ~kplVVl~GW~g-A~~rhl~KYa~lY~~lG~nvLvv~s~~-----------~~~~~p~~~~~~a~~vL~~L~~~~~~~~~ 86 (409)
.+.+||++|-.| +++.++...+..-++.||.+++...+. .+.++++ ++ ..+++.+.+..+. .
T Consensus 125 ~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~---Dl-~~~v~~i~~~~P~--a 198 (409)
T KOG1838|consen 125 DPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTE---DL-REVVNHIKKRYPQ--A 198 (409)
T ss_pred CcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHH---HH-HHHHHHHHHhCCC--C
Confidence 466777888877 667888888999999999999987654 1112221 23 3567777766665 4
Q ss_pred cEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhH-HH
Q 015317 87 PVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRL-VS 165 (409)
Q Consensus 87 pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~l-v~ 165 (409)
+++.-||||||.+....+.| . + +-.+-+.|+++.+ |-+... ..+ .+.+ +..+++ ..
T Consensus 199 ~l~avG~S~Gg~iL~nYLGE----~-g---------~~~~l~~a~~v~~-Pwd~~~--~~~-----~~~~-~~~~~~y~~ 255 (409)
T KOG1838|consen 199 PLFAVGFSMGGNILTNYLGE----E-G---------DNTPLIAAVAVCN-PWDLLA--ASR-----SIET-PLYRRFYNR 255 (409)
T ss_pred ceEEEEecchHHHHHHHhhh----c-c---------CCCCceeEEEEec-cchhhh--hhh-----HHhc-ccchHHHHH
Confidence 69999999999864443433 1 1 0112356667666 555320 000 0100 000111 00
Q ss_pred HHHHHHH--------------------------HhHhHHhhh---hccchhhHHHHH---hhccCCCCCCEEEEecCCCC
Q 015317 166 RIANGIA--------------------------SGLDAFFLN---RFESHRAEYWQT---LYSSVRFGAPYLILCSEDDD 213 (409)
Q Consensus 166 ~~~~~i~--------------------------~~l~~l~~~---~f~~~~~~~~~~---L~~~~~~~~P~LyIYS~~D~ 213 (409)
.++..+. .-++..+.. +|+. ..+||+. ++.....++|.|+|.+.+|+
T Consensus 256 ~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~-~deYY~~aSs~~~v~~I~VP~L~ina~DDP 334 (409)
T KOG1838|consen 256 ALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS-VDEYYKKASSSNYVDKIKVPLLCINAADDP 334 (409)
T ss_pred HHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc-HHHHHhhcchhhhcccccccEEEEecCCCC
Confidence 1111110 011111110 1222 2345542 23335678999999999999
Q ss_pred ccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhcc---ChHHHHHH-HHHHHHHHhhh
Q 015317 214 LAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRH---YPIDYKAA-VTELLGKAGAV 269 (409)
Q Consensus 214 lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~---hPeeY~~a-V~~Fl~~~~~~ 269 (409)
++|.+.+-- +..++. -.|-+..-...+|++=+.. .+..|.+. +.+|+..+...
T Consensus 335 v~p~~~ip~--~~~~~n-p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~~ 391 (409)
T KOG1838|consen 335 VVPEEAIPI--DDIKSN-PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIFQ 391 (409)
T ss_pred CCCcccCCH--HHHhcC-CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHhh
Confidence 999875432 222222 2588888899999999988 78888888 88999876544
No 65
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.26 E-value=9.6e-05 Score=73.14 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=54.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhh---ccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY---RHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~---r~hPeeY~~aV~~Fl~~ 265 (409)
....|.|++||++|.++.++..+++++.+... |++++.+++.=|.-|. ..+-+.+..-|.++|++
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 56789999999999999999999999998875 7999999999999885 44455666667777654
No 66
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.19 E-value=0.00046 Score=71.04 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=52.6
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..++|.|+|+|+.|.+++.+.++++++.. +.+.+.++++.|.-|. .+|++..++|.+|+.+
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILSK 383 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhhC
Confidence 35789999999999999999888877752 3578889999999888 7999999999999863
No 67
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.14 E-value=4.4e-05 Score=70.41 Aligned_cols=200 Identities=19% Similarity=0.217 Sum_probs=104.0
Q ss_pred EEEe--cccCChHHHHHHHHHHHH-HcCCcEEEEccccc-cccCchhhhHHHHHHHHHHHHHh---cCCCCcEEEEEccC
Q 015317 23 VVVF--AWMSSEERQLKRFVQLYS-SLGWNSLICHSQFL-NMFFPEKAESLALDVLKELVEEL---KFGPCPVVFASFSG 95 (409)
Q Consensus 23 VVl~--GW~gA~~rhl~KYa~lY~-~lG~nvLvv~s~~~-~~~~p~~~~~~a~~vL~~L~~~~---~~~~~pIl~H~FSn 95 (409)
|-+| ||..........+...+. +.|+.++++.-+.. ..-+|+- ..-+.++++++.+.. ...+..|++-|.|.
T Consensus 2 ~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~-~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 2 VYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAA-LEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHH-HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred EEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccccccc-ccccccceeeeccccccccccccceEEeeccc
Confidence 4444 355444333455666555 59999988765543 1122322 234456777877652 22345699999999
Q ss_pred cHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCc-cchhhhhhhhccccccCCC-ChhHHHHHHHHHHH
Q 015317 96 GPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDF-TSDLGARFAVHPSVLNMSH-PPRLVSRIANGIAS 173 (409)
Q Consensus 96 GG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~-~~~~g~~~al~~ai~~~p~-~~~lv~~~~~~i~~ 173 (409)
||..++..++.+.+. . ...++++|+=|+..++ ... +...........-+. ....+.++.
T Consensus 81 Gg~la~~~~~~~~~~-----------~--~~~~~~~~~~~p~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 141 (211)
T PF07859_consen 81 GGHLALSLALRARDR-----------G--LPKPKGIILISPWTDLQDFD-GPSYDDSNENKDDPFLPAPKIDWFW----- 141 (211)
T ss_dssp HHHHHHHHHHHHHHT-----------T--TCHESEEEEESCHSSTSTSS-CHHHHHHHHHSTTSSSBHHHHHHHH-----
T ss_pred ccchhhhhhhhhhhh-----------c--ccchhhhhcccccccchhcc-ccccccccccccccccccccccccc-----
Confidence 997655554332221 0 1248888888866545 110 010000000000011 111111211
Q ss_pred hHhHHhhhhccchhhHHHHHhhc-cCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhh
Q 015317 174 GLDAFFLNRFESHRAEYWQTLYS-SVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY 248 (409)
Q Consensus 174 ~l~~l~~~~f~~~~~~~~~~L~~-~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~ 248 (409)
.++...... .......+.. ....-.|.++++|+.|.++ ++..++++++++.|.+|+.+.+++.+|+=+|
T Consensus 142 ---~~~~~~~~~-~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~~ 211 (211)
T PF07859_consen 142 ---KLYLPGSDR-DDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFFM 211 (211)
T ss_dssp ---HHHHSTGGT-TSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGGG
T ss_pred ---ccccccccc-cccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEeeC
Confidence 112211110 0001111221 1111237899999999986 5789999999999999999999999997543
No 68
>PLN02872 triacylglycerol lipase
Probab=98.12 E-value=0.00012 Score=75.57 Aligned_cols=66 Identities=14% Similarity=0.124 Sum_probs=53.9
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhh--ccChHHHHHHHHHHHHHHhhh
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHY--RHYPIDYKAAVTELLGKAGAV 269 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~--r~hPeeY~~aV~~Fl~~~~~~ 269 (409)
+.|.+++||++|.+++.++++.+++.+.. .++.+.++++.|..++ ...|++-.+.|.+|+++....
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 57999999999999999999999887653 2577788999998443 466888889999999875544
No 69
>COG0400 Predicted esterase [General function prediction only]
Probab=98.11 E-value=0.00019 Score=68.01 Aligned_cols=61 Identities=25% Similarity=0.343 Sum_probs=50.9
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 200 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 200 ~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
...|.|.+|++.|++||....++..+..++.|.+|+.+.++ .+|- ..++++ +++.+||.+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~----i~~e~~-~~~~~wl~~~ 205 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHE----IPPEEL-EAARSWLANT 205 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCc----CCHHHH-HHHHHHHHhc
Confidence 45799999999999999999999999999999999999888 6663 445555 6677788764
No 70
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.10 E-value=8.1e-05 Score=74.99 Aligned_cols=62 Identities=19% Similarity=0.439 Sum_probs=54.1
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHh
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
++|.|+|+|+.|.++|.+..+++.++. ..++.+..+++.|+-|+ ..|+++.+.|..||.+..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARLR 325 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHhc
Confidence 389999999999999999666665543 45899999999999999 999999999999998753
No 71
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.09 E-value=0.00018 Score=67.19 Aligned_cols=85 Identities=9% Similarity=0.118 Sum_probs=49.5
Q ss_pred CCcEEEEecccCChHHHH--HHHHHHHHHcCCcEEEEccccc-------cccCchh------hhHHHHHHHHHHHHHhcC
Q 015317 19 REGIVVVFAWMSSEERQL--KRFVQLYSSLGWNSLICHSQFL-------NMFFPEK------AESLALDVLKELVEELKF 83 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl--~KYa~lY~~lG~nvLvv~s~~~-------~~~~p~~------~~~~a~~vL~~L~~~~~~ 83 (409)
.+.||++||+.+...... ..+.++-.+.|+.|+.++.+.. .++.+.. ......++++++.+....
T Consensus 13 ~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 92 (212)
T TIGR01840 13 RALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSI 92 (212)
T ss_pred CCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCc
Confidence 456777788776544332 1345555668999988765432 1121211 112234566666655544
Q ss_pred CCCcEEEEEccCcHHHHHHH
Q 015317 84 GPCPVVFASFSGGPKACMYK 103 (409)
Q Consensus 84 ~~~pIl~H~FSnGG~~~l~~ 103 (409)
.+.+|.+-|||+||.+++..
T Consensus 93 d~~~i~l~G~S~Gg~~a~~~ 112 (212)
T TIGR01840 93 DPNRVYVTGLSAGGGMTAVL 112 (212)
T ss_pred ChhheEEEEECHHHHHHHHH
Confidence 45679999999999764443
No 72
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.07 E-value=0.00016 Score=77.35 Aligned_cols=51 Identities=25% Similarity=0.368 Sum_probs=41.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI 253 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe 253 (409)
..++|.|+|.|+.|.++|++.++.+.+... ..+...+++|+|+.|+-.-|.
T Consensus 413 ~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~----~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 413 KVKVPVYIIATREDHIAPWQSAYRGAALLG----GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred hCCCCEEEEeeCCCCcCCHHHHHHHHHHCC----CCEEEEECCCCCchHhhCCCC
Confidence 467899999999999999999998866543 246678999999998776543
No 73
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.06 E-value=0.00029 Score=78.66 Aligned_cols=207 Identities=11% Similarity=0.022 Sum_probs=123.0
Q ss_pred HHHHHHHHHHcCCcEEEEcccccc-------ccCchhhhHHHHHHHHHHHHHhcC--------------CCCcEEEEEcc
Q 015317 36 LKRFVQLYSSLGWNSLICHSQFLN-------MFFPEKAESLALDVLKELVEELKF--------------GPCPVVFASFS 94 (409)
Q Consensus 36 l~KYa~lY~~lG~nvLvv~s~~~~-------~~~p~~~~~~a~~vL~~L~~~~~~--------------~~~pIl~H~FS 94 (409)
...|.+.|..+||.|++++.+... .+.+. ...-+.++|+||...... ....|.+.|.|
T Consensus 268 ~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 268 SYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred chhHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 346788999999999998775421 11121 224556788888742110 13579999999
Q ss_pred CcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCC--ChhHHHHHHHHHH
Q 015317 95 GGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSH--PPRLVSRIANGIA 172 (409)
Q Consensus 95 nGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~--~~~lv~~~~~~i~ 172 (409)
.||.+++..... -.+.++++|-+++..++.... ... ++...+. +.--..++...+.
T Consensus 347 Y~G~~~~~aAa~-----------------~pp~LkAIVp~a~is~~yd~y-r~~----G~~~~~~g~~ged~d~l~~~~~ 404 (767)
T PRK05371 347 YLGTLPNAVATT-----------------GVEGLETIIPEAAISSWYDYY-REN----GLVRAPGGYQGEDLDVLAELTY 404 (767)
T ss_pred HHHHHHHHHHhh-----------------CCCcceEEEeeCCCCcHHHHh-hcC----CceeccCCcCCcchhhHHHHhh
Confidence 999764433211 124789999999776653211 000 0000000 0000000000000
Q ss_pred H----------------h-HhHHhhhhcc---chhhHHHHHhh---ccCCCCCCEEEEecCCCCccChHHHHHHHHHHHh
Q 015317 173 S----------------G-LDAFFLNRFE---SHRAEYWQTLY---SSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCD 229 (409)
Q Consensus 173 ~----------------~-l~~l~~~~f~---~~~~~~~~~L~---~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~ 229 (409)
. . +..+. .... .....||+... .....++|.|+|+|..|..++.+.+.++++.+++
T Consensus 405 ~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~ 483 (767)
T PRK05371 405 SRNLLAGDYLRHNEACEKLLAELT-AAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPE 483 (767)
T ss_pred hcccCcchhhcchHHHHHHHhhhh-hhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHh
Confidence 0 0 00000 0000 11235676432 3346779999999999999999999999999999
Q ss_pred CCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHh
Q 015317 230 LGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 230 ~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
.|.+++++.. ...|+.-....+.+|.+.+.+|+++.+
T Consensus 484 ~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 484 NGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred cCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 8888888665 456876555667889999999988754
No 74
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.98 E-value=0.00016 Score=65.95 Aligned_cols=58 Identities=24% Similarity=0.372 Sum_probs=47.6
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHH
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVT 260 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~ 260 (409)
....+|.|+++++.|.++|++.++.+.+... ..+.+.+++++|.. +-.+|++..+.|.
T Consensus 172 ~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH~~-~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 172 SNIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGHFA-FLEGPDEFNEIII 229 (230)
T ss_dssp TTTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCSTH-HHHSHHHHHHHHH
T ss_pred cccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCChHH-HhcCHHhhhhhhc
Confidence 3577999999999999999999999666544 37899999999996 4567777777764
No 75
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.95 E-value=0.0012 Score=58.94 Aligned_cols=62 Identities=31% Similarity=0.467 Sum_probs=45.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
....|.|+++|+.|.+.|....+...+..+. ..+...++++.|.-|.. +|+++.+.|.+|++
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~-~p~~~~~~i~~~~~ 280 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN---DARLVVIPGAGHFPHLE-APEAFAAALLAFLE 280 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC---CceEEEeCCCCCcchhh-cHHHHHHHHHHHHh
Confidence 3458999999999988887774444443332 47888999999997765 45578888887443
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.88 E-value=0.00013 Score=75.46 Aligned_cols=188 Identities=19% Similarity=0.124 Sum_probs=94.5
Q ss_pred CCCCcEEEEecccCChHHHH-HHHHHHHHHcCCcEEEEcccccccc-----CchhhhHHHHHHHHHHHHHhcCCCCcEEE
Q 015317 17 GRREGIVVVFAWMSSEERQL-KRFVQLYSSLGWNSLICHSQFLNMF-----FPEKAESLALDVLKELVEELKFGPCPVVF 90 (409)
Q Consensus 17 ~~~kplVVl~GW~gA~~rhl-~KYa~lY~~lG~nvLvv~s~~~~~~-----~p~~~~~~a~~vL~~L~~~~~~~~~pIl~ 90 (409)
+.+.|+||++|-+++-...+ .-|.+.+..+|+++|+++.+....- .++. ..+-..||++|..........|.+
T Consensus 187 ~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~-~~l~~aVLd~L~~~p~VD~~RV~~ 265 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS-SRLHQAVLDYLASRPWVDHTRVGA 265 (411)
T ss_dssp SS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C-CHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH-HHHHHHHHHHHhcCCccChhheEE
Confidence 34789999999999765444 4556677899999999998765331 1221 245567888876644333457999
Q ss_pred EEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHH
Q 015317 91 ASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANG 170 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~ 170 (409)
-|||+||...+.. .- ++ .++|+|+|.-.+++.....-.. . ..++ |.+.. ..
T Consensus 266 ~G~SfGGy~AvRl-A~-le---------------~~RlkavV~~Ga~vh~~ft~~~---~---~~~~---P~my~---d~ 316 (411)
T PF06500_consen 266 WGFSFGGYYAVRL-AA-LE---------------DPRLKAVVALGAPVHHFFTDPE---W---QQRV---PDMYL---DV 316 (411)
T ss_dssp EEETHHHHHHHHH-HH-HT---------------TTT-SEEEEES---SCGGH-HH---H---HTTS----HHHH---HH
T ss_pred EEeccchHHHHHH-HH-hc---------------ccceeeEeeeCchHhhhhccHH---H---HhcC---CHHHH---HH
Confidence 9999999743322 10 11 2589999999988665321101 0 0122 22211 11
Q ss_pred HHHhHhHHhhhhccchhhHHHH----------HhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcC
Q 015317 171 IASGLDAFFLNRFESHRAEYWQ----------TLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWN 240 (409)
Q Consensus 171 i~~~l~~l~~~~f~~~~~~~~~----------~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~ 240 (409)
+.+-+. . .. .....+.. .+.+....++|.|.+++++|.++|.++..-++..- .+-+...|.
T Consensus 317 LA~rlG-~---~~-~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s----~~gk~~~~~ 387 (411)
T PF06500_consen 317 LASRLG-M---AA-VSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESS----TDGKALRIP 387 (411)
T ss_dssp HHHHCT-----SC-E-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTB----TT-EEEEE-
T ss_pred HHHHhC-C---cc-CCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcC----CCCceeecC
Confidence 111100 0 00 00001111 12222456689999999999999999988777642 233445554
Q ss_pred CCc
Q 015317 241 SSP 243 (409)
Q Consensus 241 dS~ 243 (409)
..+
T Consensus 388 ~~~ 390 (411)
T PF06500_consen 388 SKP 390 (411)
T ss_dssp SSS
T ss_pred CCc
Confidence 444
No 77
>PRK10115 protease 2; Provisional
Probab=97.85 E-value=0.00077 Score=74.43 Aligned_cols=208 Identities=15% Similarity=0.031 Sum_probs=119.9
Q ss_pred CCcEEEEecccCChH-HHHHHHHHHHHHcCCcEEEEccccccccCchhh-----------hHHHHHHHHHHHHHhcCCCC
Q 015317 19 REGIVVVFAWMSSEE-RQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKA-----------ESLALDVLKELVEELKFGPC 86 (409)
Q Consensus 19 ~kplVVl~GW~gA~~-rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~-----------~~~a~~vL~~L~~~~~~~~~ 86 (409)
.|-|+.++|--+.+. .........+.++|+.++++..+...-+..++. ..-..+++++|++..-..+.
T Consensus 445 ~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~ 524 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS 524 (686)
T ss_pred CCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 455556666444432 234455678999999999988776543322221 11122345666654333456
Q ss_pred cEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHH
Q 015317 87 PVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSR 166 (409)
Q Consensus 87 pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~ 166 (409)
.|.+.|-|+||.+....+.+ -.+..++.|...+..+....+. ...+ |. ...+
T Consensus 525 rl~i~G~S~GG~l~~~~~~~-----------------~Pdlf~A~v~~vp~~D~~~~~~-----~~~~---p~---~~~~ 576 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQ-----------------RPELFHGVIAQVPFVDVVTTML-----DESI---PL---TTGE 576 (686)
T ss_pred HeEEEEECHHHHHHHHHHhc-----------------ChhheeEEEecCCchhHhhhcc-----cCCC---CC---ChhH
Confidence 79999999999754333322 1235778888887666542111 0011 10 0001
Q ss_pred HHHHHHHhHhHHhhhhccchhhHHH---HHhhccCCCCCC-EEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc---
Q 015317 167 IANGIASGLDAFFLNRFESHRAEYW---QTLYSSVRFGAP-YLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW--- 239 (409)
Q Consensus 167 ~~~~i~~~l~~l~~~~f~~~~~~~~---~~L~~~~~~~~P-~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f--- 239 (409)
.. -+..........+. ..+.+....+.| .|+++|.+|.-||+.+.++++++++++|.+++.+.+
T Consensus 577 ~~---------e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~ 647 (686)
T PRK10115 577 FE---------EWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTD 647 (686)
T ss_pred HH---------HhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEec
Confidence 10 01111111011111 123333455789 556699999999999999999999999999888888
Q ss_pred CCCccchhhccChHHHHHHH---HHHHHH
Q 015317 240 NSSPHVGHYRHYPIDYKAAV---TELLGK 265 (409)
Q Consensus 240 ~dS~HV~H~r~hPeeY~~aV---~~Fl~~ 265 (409)
.+++|- ...+..+.++.+ ..|+-.
T Consensus 648 ~~~GHg--~~~~r~~~~~~~A~~~aFl~~ 674 (686)
T PRK10115 648 MDSGHG--GKSGRFKSYEGVAMEYAFLIA 674 (686)
T ss_pred CCCCCC--CCcCHHHHHHHHHHHHHHHHH
Confidence 888887 345555555444 445443
No 78
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.84 E-value=0.0006 Score=70.38 Aligned_cols=66 Identities=18% Similarity=0.233 Sum_probs=58.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCC-CccchhhccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS-SPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d-S~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..++|.|+|+++.|.++|.+..+++++..+..|.+++.+.+++ ..|..++ .+|+++.+.|.+|+++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 4578999999999999999999999988876555688888885 8999988 6999999999999975
No 79
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.76 E-value=0.0008 Score=77.17 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=52.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEE-EEcCCCccchhhccC--hHHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKL-VKWNSSPHVGHYRHY--PIDYKAAVTELLGKA 266 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~-~~f~dS~HV~H~r~h--PeeY~~aV~~Fl~~~ 266 (409)
..++|.|+|+|+.|.++|++.++.+.+.... .+. +.+.+++|.+++-.- |++=|-.|.++|++-
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~----a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRGIRRAAPN----AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 5668999999999999999999999776432 343 677899999888764 888999999999854
No 80
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.73 E-value=0.0016 Score=59.91 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=102.9
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHH
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKA 99 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~ 99 (409)
..++|+.||.++.+.| |-..+.+.-+++-.+..+.. -.|. ..++++.|.++.+..++|++|-+.|.|..+
T Consensus 3 ~~~lIVpG~~~Sg~~H---Wq~~we~~l~~a~rveq~~w--~~P~-----~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~ 72 (181)
T COG3545 3 TDVLIVPGYGGSGPNH---WQSRWESALPNARRVEQDDW--EAPV-----LDDWIARLEKEVNAAEGPVVLVAHSLGCAT 72 (181)
T ss_pred ceEEEecCCCCCChhH---HHHHHHhhCccchhcccCCC--CCCC-----HHHHHHHHHHHHhccCCCeEEEEecccHHH
Confidence 5789999999999776 77788888888655554432 1222 236777788877777888999999999975
Q ss_pred HHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHHhHhHHh
Q 015317 100 CMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFF 179 (409)
Q Consensus 100 ~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~~l~~l~ 179 (409)
.+..+ +.. ..+|.|.++=+.|-..... ..++.+ +
T Consensus 73 v~h~~-~~~----------------~~~V~GalLVAppd~~~~~--------------~~~~~~---~------------ 106 (181)
T COG3545 73 VAHWA-EHI----------------QRQVAGALLVAPPDVSRPE--------------IRPKHL---M------------ 106 (181)
T ss_pred HHHHH-Hhh----------------hhccceEEEecCCCccccc--------------cchhhc---c------------
Confidence 33322 211 1379999998865322210 000000 0
Q ss_pred hhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccC
Q 015317 180 LNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHY 251 (409)
Q Consensus 180 ~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~h 251 (409)
.|.-. ...+..-|.+.+.|++|+.++++..+++++.+-.. +-+.+|.||+..+
T Consensus 107 --tf~~~---------p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~--------lv~~g~~GHiN~~ 159 (181)
T COG3545 107 --TFDPI---------PREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA--------LVDVGEGGHINAE 159 (181)
T ss_pred --ccCCC---------ccccCCCceeEEEecCCCCCCHHHHHHHHHhccHh--------heecccccccchh
Confidence 01100 01234569999999999999999999999988643 2346677777765
No 81
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.63 E-value=0.0029 Score=62.74 Aligned_cols=55 Identities=25% Similarity=0.382 Sum_probs=49.2
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHhCC-CceEEEEcCCCccchhhccChHH
Q 015317 200 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLG-ADVKLVKWNSSPHVGHYRHYPID 254 (409)
Q Consensus 200 ~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G-~~V~~~~f~dS~HV~H~r~hPee 254 (409)
.+.|.++.+|..|.+||+...+++++.+.++| .+|+.+......|.......-.+
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~ 273 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPD 273 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHH
Confidence 46899999999999999999999999999999 79999999999999877655443
No 82
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.63 E-value=0.0055 Score=60.17 Aligned_cols=201 Identities=11% Similarity=0.070 Sum_probs=97.2
Q ss_pred CCcEEEEecccCC---hHHHHHHHHHHHHHcCCcEEEEcccccccc--Cch--hhhHHHHH---HHHHHHHHhcCCCCcE
Q 015317 19 REGIVVVFAWMSS---EERQLKRFVQLYSSLGWNSLICHSQFLNMF--FPE--KAESLALD---VLKELVEELKFGPCPV 88 (409)
Q Consensus 19 ~kplVVl~GW~gA---~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~--~p~--~~~~~a~~---vL~~L~~~~~~~~~pI 88 (409)
.+.||++|||.+. ..+....+++.+.+.||+|+.++.+....- ... .....+.+ ++++|.+ . ...+|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~-~--~~~~v 101 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIE-Q--GHPPV 101 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHh-c--CCCCE
Confidence 3568899998652 234456778888899999999887653210 000 00122222 3333332 2 23579
Q ss_pred EEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHH-H
Q 015317 89 VFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSR-I 167 (409)
Q Consensus 89 l~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~-~ 167 (409)
++.|+||||...+....+ ....++++|+-++.......+.-...+......++.......- +
T Consensus 102 ~LvG~SmGG~vAl~~A~~-----------------~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~~~~~~ 164 (266)
T TIGR03101 102 TLWGLRLGALLALDAANP-----------------LAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAEASNSL 164 (266)
T ss_pred EEEEECHHHHHHHHHHHh-----------------CccccceEEEeccccchHHHHHHHHHHHHHHHhccccccccchhH
Confidence 999999999754432211 1246888999985544332111100000000000000000000 0
Q ss_pred HHHHHHhHhHHhhhhccchhhHHHHHhhc-----cCCCCCCEEEEecC-CCCccChHHHHHHHHHHHhCCCceEEEEcCC
Q 015317 168 ANGIASGLDAFFLNRFESHRAEYWQTLYS-----SVRFGAPYLILCSE-DDDLAPYQVIYNFAQRLCDLGADVKLVKWNS 241 (409)
Q Consensus 168 ~~~i~~~l~~l~~~~f~~~~~~~~~~L~~-----~~~~~~P~LyIYS~-~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d 241 (409)
......+ ..+-..++.- ....-..|.. ......+.|.+-.. .+.=-+......+++.++++|.+|+...|.+
T Consensus 165 ~~~~~~~-~~~~~~g~~~-~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~ 242 (266)
T TIGR03101 165 RERLLAG-EDVEIAGYEL-APALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPG 242 (266)
T ss_pred HhhccCC-CeEEEeceec-CHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCC
Confidence 0000000 0000001110 0111122211 11223456666553 3444556688999999999999999999875
No 83
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.27 E-value=0.027 Score=55.56 Aligned_cols=210 Identities=19% Similarity=0.124 Sum_probs=116.0
Q ss_pred eeeee-ccCCCCCCCcEEEEec--ccC-ChHHHHHHHHHHHHHcCCcEEEEcccccc-ccCchhhhHHHHHHHHHHHHHh
Q 015317 7 RYYWG-RKERGGRREGIVVVFA--WMS-SEERQLKRFVQLYSSLGWNSLICHSQFLN-MFFPEKAESLALDVLKELVEEL 81 (409)
Q Consensus 7 ~~~~~-~~~~~~~~kplVVl~G--W~g-A~~rhl~KYa~lY~~lG~nvLvv~s~~~~-~~~p~~~~~~a~~vL~~L~~~~ 81 (409)
+.|.. .+.. .+.+.|+.+|| |.. ....|-..-..+....|+.|++++-+..- .-+|.. ..-+.+++.++.+..
T Consensus 67 ~~y~p~~~~~-~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~-~~d~~~a~~~l~~~~ 144 (312)
T COG0657 67 RVYRPDRKAA-ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAA-LEDAYAAYRWLRANA 144 (312)
T ss_pred EEECCCCCCC-CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCch-HHHHHHHHHHHHhhh
Confidence 56665 1220 12455666665 444 44455466777888899999988776542 234433 233556667776543
Q ss_pred ---cCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCC
Q 015317 82 ---KFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMS 158 (409)
Q Consensus 82 ---~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p 158 (409)
...+..|.|-|.|-||..++... +.+... -.....++|+-|.-.+.+. ...... ......
T Consensus 145 ~~~g~dp~~i~v~GdSAGG~La~~~a-~~~~~~------------~~~~p~~~~li~P~~d~~~--~~~~~~--~~~~~~ 207 (312)
T COG0657 145 AELGIDPSRIAVAGDSAGGHLALALA-LAARDR------------GLPLPAAQVLISPLLDLTS--SAASLP--GYGEAD 207 (312)
T ss_pred HhhCCCccceEEEecCcccHHHHHHH-HHHHhc------------CCCCceEEEEEecccCCcc--cccchh--hcCCcc
Confidence 33457799999999997433332 222211 1135678888885445442 000000 000000
Q ss_pred CCh-h-HHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhcc--CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCce
Q 015317 159 HPP-R-LVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSS--VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADV 234 (409)
Q Consensus 159 ~~~-~-lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~--~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V 234 (409)
... . +..|+. ..+..............+... .. -.|.++++++.|.+.+ +.+.+++.+++.|..+
T Consensus 208 ~~~~~~~~~~~~--------~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~ 276 (312)
T COG0657 208 LLDAAAILAWFA--------DLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPV 276 (312)
T ss_pred ccCHHHHHHHHH--------HHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeE
Confidence 001 1 111111 111111111000011112211 12 2589999999999999 9999999999999999
Q ss_pred EEEEcCCCccch
Q 015317 235 KLVKWNSSPHVG 246 (409)
Q Consensus 235 ~~~~f~dS~HV~ 246 (409)
+...+++..|.=
T Consensus 277 ~~~~~~g~~H~f 288 (312)
T COG0657 277 ELRVYPGMIHGF 288 (312)
T ss_pred EEEEeCCcceec
Confidence 999999999943
No 84
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.18 E-value=0.00042 Score=65.53 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhh
Q 015317 71 LDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAV 150 (409)
Q Consensus 71 ~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al 150 (409)
++++++|.+.....+..|.+.|.|-||-.+|..... .+.|+++|.-|++.............
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~------------------~~~i~avVa~~ps~~~~~~~~~~~~~ 68 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASR------------------FPQISAVVAISPSSVVFQGIGFYRDS 68 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHH------------------SSSEEEEEEES--SB--SSEEEETTE
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhc------------------CCCccEEEEeCCceeEecchhcccCC
Confidence 456777776655555789999999999654443211 13799999988665544311110000
Q ss_pred ccccccCCCChhHHHHHHHHHHHhHhHHhhhhccchhhH-HHHHhhccCCCCCCEEEEecCCCCccChHHHHHHH-HHHH
Q 015317 151 HPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAE-YWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFA-QRLC 228 (409)
Q Consensus 151 ~~ai~~~p~~~~lv~~~~~~i~~~l~~l~~~~f~~~~~~-~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a-~~~r 228 (409)
...++..+.......+... ..+... ..+...... ..++.....+.+.|.|+|.|++|.+.|....-+.+ ++++
T Consensus 69 ~~~lp~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~ 143 (213)
T PF08840_consen 69 SKPLPYLPFDISKFSWNEP---GLLRSR--YAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLK 143 (213)
T ss_dssp --EE----B-GGG-EE-TT---S-EE-T--T-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHH
T ss_pred CccCCcCCcChhhceecCC---cceehh--hhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHH
Confidence 0011111000000000000 000000 001100000 00111112345789999999999999988876655 5567
Q ss_pred hCCCc--eEEEEcCCCccc
Q 015317 229 DLGAD--VKLVKWNSSPHV 245 (409)
Q Consensus 229 ~~G~~--V~~~~f~dS~HV 245 (409)
+.|.. ++.+.+++++|.
T Consensus 144 ~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 144 AAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp CTT-----EEEEETTB-S-
T ss_pred HhCCCCcceEEEcCCCCce
Confidence 76755 788889888886
No 85
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.16 E-value=0.028 Score=56.67 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=46.5
Q ss_pred HHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 190 YWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 190 ~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
|.+.++-....++|.|+-.|-.|++||+..+.+.++.+.. ++++..++...|-. .++..++...+|+++
T Consensus 251 Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---~K~l~vyp~~~He~----~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 251 YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG---PKELVVYPEYGHEY----GPEFQEDKQLNFLKE 319 (320)
T ss_dssp TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S---SEEEEEETT--SST----THHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC---CeeEEeccCcCCCc----hhhHHHHHHHHHHhc
Confidence 3444444456779999999999999999999999998763 58999999888842 334337888888865
No 86
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.14 E-value=0.0045 Score=56.72 Aligned_cols=169 Identities=15% Similarity=0.170 Sum_probs=89.3
Q ss_pred EEEEecccCChHHHHHHHHHH-HHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHH
Q 015317 22 IVVVFAWMSSEERQLKRFVQL-YSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKAC 100 (409)
Q Consensus 22 lVVl~GW~gA~~rhl~KYa~l-Y~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~ 100 (409)
|+||+||.++.+.|=..+-+- |.+. ..+..+. +-.|+. ..++..|.++....+.+++|-+.|.|..+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~----~~V~~~~--~~~P~~-----~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS----VRVEQPD--WDNPDL-----DEWVQALDQAIDAIDEPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS----EEEEEC----TS--H-----HHHHHHHHHCCHC-TTTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC----eEEeccc--cCCCCH-----HHHHHHHHHHHhhcCCCeEEEEeCHHHHHH
Confidence 689999999988875544432 3322 3333222 233433 356666766665556679999999999764
Q ss_pred HHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHHhHhHHhh
Q 015317 101 MYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFL 180 (409)
Q Consensus 101 l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~~l~~l~~ 180 (409)
+..+. . ....+|+|.++=|+|..... . . . ++.+ .
T Consensus 70 l~~l~---~-------------~~~~~v~g~lLVAp~~~~~~-~-~---------~---~~~~---------~------- 103 (171)
T PF06821_consen 70 LRWLA---E-------------QSQKKVAGALLVAPFDPDDP-E-P---------F---PPEL---------D------- 103 (171)
T ss_dssp HHHHH---H-------------TCCSSEEEEEEES--SCGCH-H-C---------C---TCGG---------C-------
T ss_pred HHHHh---h-------------cccccccEEEEEcCCCcccc-c-c---------h---hhhc---------c-------
Confidence 44331 1 12358999999997643210 0 0 0 0110 0
Q ss_pred hhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHH
Q 015317 181 NRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVT 260 (409)
Q Consensus 181 ~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~ 260 (409)
.|..... ...+.|.+.|.|++|+.||++..+++++.+. .+...+.+++|...- ..-..|..+.
T Consensus 104 -~f~~~p~---------~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~-----a~~~~~~~~GHf~~~--~G~~~~p~~~ 166 (171)
T PF06821_consen 104 -GFTPLPR---------DPLPFPSIVIASDNDPYVPFERAQRLAQRLG-----AELIILGGGGHFNAA--SGFGPWPEGL 166 (171)
T ss_dssp -CCTTSHC---------CHHHCCEEEEEETTBSSS-HHHHHHHHHHHT------EEEEETS-TTSSGG--GTHSS-HHHH
T ss_pred -ccccCcc---------cccCCCeEEEEcCCCCccCHHHHHHHHHHcC-----CCeEECCCCCCcccc--cCCCchHHHH
Confidence 0000000 0112466999999999999999999999875 456666666665432 1233344444
Q ss_pred HHHH
Q 015317 261 ELLG 264 (409)
Q Consensus 261 ~Fl~ 264 (409)
+.|+
T Consensus 167 ~~l~ 170 (171)
T PF06821_consen 167 DLLQ 170 (171)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 4443
No 87
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.10 E-value=0.016 Score=55.43 Aligned_cols=168 Identities=14% Similarity=0.129 Sum_probs=87.5
Q ss_pred CCcEEEEecccCChHHHHHHH---HHHHHHcCCcEEEEcccc-------ccccCch-h-h---hHHHHHHHHHHHHHhcC
Q 015317 19 REGIVVVFAWMSSEERQLKRF---VQLYSSLGWNSLICHSQF-------LNMFFPE-K-A---ESLALDVLKELVEELKF 83 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KY---a~lY~~lG~nvLvv~s~~-------~~~~~p~-~-~---~~~a~~vL~~L~~~~~~ 83 (409)
+.||||++...+.....+... .++=.+.||-++..+... .+.+... . . ......+++++....+.
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 457777666666555554443 445556777777665421 1112111 1 1 12334667777777776
Q ss_pred CCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhH
Q 015317 84 GPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRL 163 (409)
Q Consensus 84 ~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~l 163 (409)
.+.+|.+-|+|+||.+.. .+.- . .+|.|..+. .++|..++++-.... ....+..... + .+..
T Consensus 95 D~~RVyv~G~S~Gg~ma~-~la~---~------~pd~faa~a-~~sG~~~~~a~~~~~----a~~~m~~g~~--~-~p~~ 156 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMAN-VLAC---A------YPDLFAAVA-VVSGVPYGCAASGAS----ALSAMRSGPR--P-APAA 156 (220)
T ss_pred CCCceeeEEECHHHHHHH-HHHH---h------CCccceEEE-eecccccccccCccc----HHHHhhCCCC--C-ChHH
Confidence 778899999999997532 2211 0 123333222 344444444321111 0000000000 0 0000
Q ss_pred HHHHHHHHHHhHhHHhhhhccchhhHHHHHhhc-cCCCCCCEEEEecCCCCccChHHHHHHHHHHHhC
Q 015317 164 VSRIANGIASGLDAFFLNRFESHRAEYWQTLYS-SVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDL 230 (409)
Q Consensus 164 v~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~-~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~ 230 (409)
.+..... ..-...|++++|+.+|.+|.+...++.++.+...
T Consensus 157 --------------------------~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 157 --------------------------AWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred --------------------------HHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 0000000 0112469999999999999999999999998764
No 88
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.02 E-value=0.11 Score=52.89 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=45.0
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 200 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 200 ~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..+|.+||||..|=|=...-.+ ....+.. ..|+....++|+|- -+-++|+.+.+.|.+++++
T Consensus 302 ~~~pv~fiyG~~dWmD~~~g~~-~~~~~~~--~~~~~~~v~~aGHh-vylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 302 KDVPVTFIYGDRDWMDKNAGLE-VTKSLMK--EYVEIIIVPGAGHH-VYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred cCCCEEEEecCcccccchhHHH-HHHHhhc--ccceEEEecCCCce-eecCCHHHHHHHHHHHHhc
Confidence 3589999999998764433333 2222222 24888899999995 5678899999999999875
No 89
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.93 E-value=0.0063 Score=59.76 Aligned_cols=84 Identities=18% Similarity=0.227 Sum_probs=50.4
Q ss_pred CCcEEEEecccCCh-HHHHHHHHHHHHH-cCCcEEEEccccccc-cCchhh---hHH---HHHHHHHHHHHhcCCCCcEE
Q 015317 19 REGIVVVFAWMSSE-ERQLKRFVQLYSS-LGWNSLICHSQFLNM-FFPEKA---ESL---ALDVLKELVEELKFGPCPVV 89 (409)
Q Consensus 19 ~kplVVl~GW~gA~-~rhl~KYa~lY~~-lG~nvLvv~s~~~~~-~~p~~~---~~~---a~~vL~~L~~~~~~~~~pIl 89 (409)
.+++|+||||.+.. .......++.|.. .++||++++-+...- .++... ... ...+|+.|.+........|.
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~ 115 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVH 115 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEE
Confidence 47899999999876 4445556666665 579999987544211 112111 111 22345555443222335699
Q ss_pred EEEccCcHHHHHH
Q 015317 90 FASFSGGPKACMY 102 (409)
Q Consensus 90 ~H~FSnGG~~~l~ 102 (409)
+-|+|+||..+.+
T Consensus 116 lIGhSlGa~vAg~ 128 (275)
T cd00707 116 LIGHSLGAHVAGF 128 (275)
T ss_pred EEEecHHHHHHHH
Confidence 9999999975433
No 90
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.81 E-value=0.036 Score=59.68 Aligned_cols=52 Identities=19% Similarity=0.329 Sum_probs=41.0
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI 253 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe 253 (409)
..+++|.|.+.++.|.+|||+.+....+.. |.+++.+.. .|+|++-.-.-|.
T Consensus 438 ~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~fvl~-~gGHIggivnpP~ 489 (560)
T TIGR01839 438 KKVKCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRFVLS-NSGHIQSILNPPG 489 (560)
T ss_pred hcCCCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEEEec-CCCccccccCCCC
Confidence 357899999999999999999999887754 447665554 7889988765443
No 91
>PLN00021 chlorophyllase
Probab=96.74 E-value=0.13 Score=51.75 Aligned_cols=198 Identities=17% Similarity=0.115 Sum_probs=106.3
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhc--------CCCCcEEE
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELK--------FGPCPVVF 90 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~--------~~~~pIl~ 90 (409)
.+.||++|||.+... ......+...+.||.|+.++.....--........+.++++++.+... ....++.+
T Consensus 52 ~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 52 YPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 477889999987554 345566667889999988764431100001111234455566654321 12246999
Q ss_pred EEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHH
Q 015317 91 ASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANG 170 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~ 170 (409)
.|+|+||.+.+....+.- + .....+++++|.=+ |..... .. ... .++++.
T Consensus 131 ~GHS~GG~iA~~lA~~~~----------~--~~~~~~v~ali~ld-Pv~g~~-----~~------~~~-~p~il~----- 180 (313)
T PLN00021 131 AGHSRGGKTAFALALGKA----------A--VSLPLKFSALIGLD-PVDGTS-----KG------KQT-PPPVLT----- 180 (313)
T ss_pred EEECcchHHHHHHHhhcc----------c--cccccceeeEEeec-cccccc-----cc------cCC-CCcccc-----
Confidence 999999976444332210 0 01123566666332 221110 00 000 112100
Q ss_pred HHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCC-----ccC----hHHH-HHHHHHHHhCCCceEEEEcC
Q 015317 171 IASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDD-----LAP----YQVI-YNFAQRLCDLGADVKLVKWN 240 (409)
Q Consensus 171 i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~-----lVP----~~~V-e~~a~~~r~~G~~V~~~~f~ 240 (409)
+ .. ...+...|.|+|.+..|. ++| .... ++|+++++. .+.....+
T Consensus 181 -------~---~~------------~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~~~~ 235 (313)
T PLN00021 181 -------Y---AP------------HSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHFVAK 235 (313)
T ss_pred -------c---Cc------------ccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---Ceeeeeec
Confidence 0 00 011245899999999663 333 4444 677776663 57788889
Q ss_pred CCccchhhccChH--------------HHHHHHHHHHHHHhhhhhH
Q 015317 241 SSPHVGHYRHYPI--------------DYKAAVTELLGKAGAVYSQ 272 (409)
Q Consensus 241 dS~HV~H~r~hPe--------------eY~~aV~~Fl~~~~~~~~~ 272 (409)
+..|.+-+..+.. .=.+.+++|+......+..
T Consensus 236 ~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~ 281 (313)
T PLN00021 236 DYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLK 281 (313)
T ss_pred CCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHH
Confidence 9999988666510 0245666666666666553
No 92
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.67 E-value=0.049 Score=51.10 Aligned_cols=167 Identities=13% Similarity=0.143 Sum_probs=103.6
Q ss_pred CCcEEEEec---ccC--ChHHHHHHHHHHHHHcCCcEEEEccccc-------cccCchhhhHHHHHHHHHHHHHhcCCCC
Q 015317 19 REGIVVVFA---WMS--SEERQLKRFVQLYSSLGWNSLICHSQFL-------NMFFPEKAESLALDVLKELVEELKFGPC 86 (409)
Q Consensus 19 ~kplVVl~G---W~g--A~~rhl~KYa~lY~~lG~nvLvv~s~~~-------~~~~p~~~~~~a~~vL~~L~~~~~~~~~ 86 (409)
..|++||+. -+| -+.+.+..-+..++++|+.+|.+.-+.. +-+..| ...|..+|+|+....+..+
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE--~~Da~aaldW~~~~hp~s~- 103 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGE--LEDAAAALDWLQARHPDSA- 103 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcch--HHHHHHHHHHHHhhCCCch-
Confidence 577887753 111 2335678888899999999999766431 112222 3466678899887665433
Q ss_pred cEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHH
Q 015317 87 PVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSR 166 (409)
Q Consensus 87 pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~ 166 (409)
..-|-|||-|++..+.. +... +.+-+.|-=++|. .. +
T Consensus 104 ~~~l~GfSFGa~Ia~~l----a~r~--------------~e~~~~is~~p~~----------------------~~---~ 140 (210)
T COG2945 104 SCWLAGFSFGAYIAMQL----AMRR--------------PEILVFISILPPI----------------------NA---Y 140 (210)
T ss_pred hhhhcccchHHHHHHHH----HHhc--------------ccccceeeccCCC----------------------Cc---h
Confidence 23688999999864332 2211 0011111111110 00 0
Q ss_pred HHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccch
Q 015317 167 IANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVG 246 (409)
Q Consensus 167 ~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~ 246 (409)
+|+ .+ .+.+.|.|+|++++|+++++..+.+.++. .+++.+...++.|-=
T Consensus 141 ----------------------dfs-~l---~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~~a~HFF 189 (210)
T COG2945 141 ----------------------DFS-FL---APCPSPGLVIQGDADDVVDLVAVLKWQES-----IKITVITIPGADHFF 189 (210)
T ss_pred ----------------------hhh-hc---cCCCCCceeEecChhhhhcHHHHHHhhcC-----CCCceEEecCCCcee
Confidence 000 01 24568999999999999988877776653 568888999999987
Q ss_pred hhccChHHHHHHHHHHHH
Q 015317 247 HYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 247 H~r~hPeeY~~aV~~Fl~ 264 (409)
|-+.+ +-.+.|.+||+
T Consensus 190 ~gKl~--~l~~~i~~~l~ 205 (210)
T COG2945 190 HGKLI--ELRDTIADFLE 205 (210)
T ss_pred cccHH--HHHHHHHHHhh
Confidence 76654 56788888885
No 93
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.66 E-value=0.078 Score=53.95 Aligned_cols=59 Identities=14% Similarity=0.326 Sum_probs=49.1
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 202 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 202 ~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
....+++.++|..||...+.++.+.|. |..|+. -+++||+.+-.|.+.|.++|.+.+++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WP--GsEvR~---l~gGHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWP--GSEVRY---LPGGHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCC--CCeEEE---ecCCcEEEeeechHHHHHHHHHHhhC
Confidence 457889999999999999999888887 433333 35699999999999999999987763
No 94
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.64 E-value=0.065 Score=51.37 Aligned_cols=153 Identities=16% Similarity=0.148 Sum_probs=91.5
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcc---cccccc-----Cchh--------hhHHHHHHHHHHHHHhc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHS---QFLNMF-----FPEK--------AESLALDVLKELVEELK 82 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s---~~~~~~-----~p~~--------~~~~a~~vL~~L~~~~~ 82 (409)
++.||+|--|.|-+...+.-.++..+..||+|++.+- ++.+-- .+++ ..+....++++|..+-
T Consensus 39 ~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g- 117 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG- 117 (242)
T ss_pred CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC-
Confidence 3578888778887777788889999999999998643 222211 1111 1123345566555222
Q ss_pred CCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChh
Q 015317 83 FGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPR 162 (409)
Q Consensus 83 ~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~ 162 (409)
.+..|.+.||.+||... .+++ .-|+ .+. + +..
T Consensus 118 -~~kkIGv~GfCwGak~v----v~~~-----------------------~~~~---~f~----a------~v~------- 149 (242)
T KOG3043|consen 118 -DSKKIGVVGFCWGAKVV----VTLS-----------------------AKDP---EFD----A------GVS------- 149 (242)
T ss_pred -CcceeeEEEEeecceEE----EEee-----------------------ccch---hhe----e------eeE-------
Confidence 23569999999999631 0100 0000 000 0 000
Q ss_pred HHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCc--eEEEEcC
Q 015317 163 LVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGAD--VKLVKWN 240 (409)
Q Consensus 163 lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~--V~~~~f~ 240 (409)
++..... +.+..+.++|+||++++.|.++|.+++.+.-+..++. .. -+.+.|+
T Consensus 150 ---------------~hps~~d---------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-~~~~~~v~~f~ 204 (242)
T KOG3043|consen 150 ---------------FHPSFVD---------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-PAVGSQVKTFS 204 (242)
T ss_pred ---------------ecCCcCC---------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcC-cccceeEEEcC
Confidence 0000000 0112345689999999999999999999998888765 22 2467888
Q ss_pred CCccc
Q 015317 241 SSPHV 245 (409)
Q Consensus 241 dS~HV 245 (409)
+=.|-
T Consensus 205 g~~HG 209 (242)
T KOG3043|consen 205 GVGHG 209 (242)
T ss_pred Cccch
Confidence 88885
No 95
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.24 E-value=0.3 Score=50.94 Aligned_cols=67 Identities=12% Similarity=0.077 Sum_probs=54.2
Q ss_pred CCC-CCEEEEecCCCCccChHHHHHHHHHHHhCC-CceEEEEcCCCccchhhccC--hHHHHHHHHHHHHH
Q 015317 199 RFG-APYLILCSEDDDLAPYQVIYNFAQRLCDLG-ADVKLVKWNSSPHVGHYRHY--PIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~-~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G-~~V~~~~f~dS~HV~H~r~h--PeeY~~aV~~Fl~~ 265 (409)
.++ +|.|.+.++.|+++|++..+...+.+...+ .+++.....+.+|+|-+..- +++=|-.|.+||.+
T Consensus 335 ~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 335 AITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 455 999999999999999999999999864443 24667788899999988653 67778888888864
No 96
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=96.15 E-value=0.056 Score=54.07 Aligned_cols=109 Identities=14% Similarity=0.146 Sum_probs=53.6
Q ss_pred CCcEEEEecccCCh---HHHHHHHHHHHHHcCCcEEEE--ccccccccCchhhh---HHHHHHHHHHHHHhcC--CCCcE
Q 015317 19 REGIVVVFAWMSSE---ERQLKRFVQLYSSLGWNSLIC--HSQFLNMFFPEKAE---SLALDVLKELVEELKF--GPCPV 88 (409)
Q Consensus 19 ~kplVVl~GW~gA~---~rhl~KYa~lY~~lG~nvLvv--~s~~~~~~~p~~~~---~~a~~vL~~L~~~~~~--~~~pI 88 (409)
.+-.||+.|-++-. -.++..-++.-...||.++-+ .+.+..++...-.. +++ .+|+.|...... ....|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~-~~v~ylr~~~~g~~~~~kI 110 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIA-QLVEYLRSEKGGHFGREKI 110 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHH-HHHHHHHHHS------S-E
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHH-HHHHHHHHhhccccCCccE
Confidence 45567777777743 244666666677789999654 44444444333221 222 344555544211 23569
Q ss_pred EEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCc
Q 015317 89 VFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDF 140 (409)
Q Consensus 89 l~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~ 140 (409)
++.|.|-|-=-+|+.+ ..... ..-+.+|.|.|+-.+.+|.
T Consensus 111 VLmGHSTGcQdvl~Yl----~~~~~--------~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 111 VLMGHSTGCQDVLHYL----SSPNP--------SPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp EEEEECCHHHHHHHHH----HH-TT-----------CCCEEEEEEEEE---T
T ss_pred EEEecCCCcHHHHHHH----hccCc--------cccccceEEEEEeCCCCCh
Confidence 9999998874434433 22111 1125789999999965554
No 97
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.00 E-value=0.093 Score=49.33 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=28.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCcc
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPH 244 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~H 244 (409)
...+|.|-|+|++|.+++.+..+.+++..... .+ +...+.+|
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~-v~~h~gGH 200 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPD---AR-VIEHDGGH 200 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EE-EEEESSSS
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cE-EEEECCCC
Confidence 34689999999999999999999999988763 33 34444555
No 98
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.82 E-value=0.085 Score=55.50 Aligned_cols=84 Identities=14% Similarity=0.206 Sum_probs=49.1
Q ss_pred CCcEEEEecccCCh--HHHHHHHHHHHH-Hc-CCcEEEEccccccc-cCchhh---hHH---HHHHHHHHHHHhcCCCCc
Q 015317 19 REGIVVVFAWMSSE--ERQLKRFVQLYS-SL-GWNSLICHSQFLNM-FFPEKA---ESL---ALDVLKELVEELKFGPCP 87 (409)
Q Consensus 19 ~kplVVl~GW~gA~--~rhl~KYa~lY~-~l-G~nvLvv~s~~~~~-~~p~~~---~~~---a~~vL~~L~~~~~~~~~p 87 (409)
.+++|+||||+++. ...+...++.+. .. .+||++++-+...- -.+... ... ..++|++|.+........
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~ 120 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDN 120 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 58899999998743 334445555433 33 59999998764221 112111 111 234555555443333356
Q ss_pred EEEEEccCcHHHHHH
Q 015317 88 VVFASFSGGPKACMY 102 (409)
Q Consensus 88 Il~H~FSnGG~~~l~ 102 (409)
+.+-|+|+||.++.+
T Consensus 121 VhLIGHSLGAhIAg~ 135 (442)
T TIGR03230 121 VHLLGYSLGAHVAGI 135 (442)
T ss_pred EEEEEECHHHHHHHH
Confidence 999999999975444
No 99
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=95.52 E-value=0.1 Score=49.72 Aligned_cols=201 Identities=14% Similarity=0.168 Sum_probs=118.7
Q ss_pred CCCce---eeeeccCCCCCCCcEEEEec--ccCChHHHHHHHHHHHHHcCCcEEEEcccccccc-CchhhhHHHHHHHHH
Q 015317 3 GFGGR---YYWGRKERGGRREGIVVVFA--WMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMF-FPEKAESLALDVLKE 76 (409)
Q Consensus 3 ~~~~~---~~~~~~~~~~~~kplVVl~G--W~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~-~p~~~~~~a~~vL~~ 76 (409)
|-||| -.||.. +..|-+|.||| |.-...+.-..-+-.-.++||.+..+.-.+..-. .-+....-+..-+++
T Consensus 51 g~~g~q~VDIwg~~---~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~f 127 (270)
T KOG4627|consen 51 GEGGRQLVDIWGST---NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNF 127 (270)
T ss_pred CCCCceEEEEecCC---CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHH
Confidence 66776 479842 33688899998 5555655555566778899999987655442111 111112234455677
Q ss_pred HHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhcccccc
Q 015317 77 LVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLN 156 (409)
Q Consensus 77 L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~ 156 (409)
+++..++.. -|+|-|.|.|+-..+.++..+ -.++|.|.|+=|+--+..+..++-.. .
T Consensus 128 ilk~~~n~k-~l~~gGHSaGAHLa~qav~R~----------------r~prI~gl~l~~GvY~l~EL~~te~g------~ 184 (270)
T KOG4627|consen 128 ILKYTENTK-VLTFGGHSAGAHLAAQAVMRQ----------------RSPRIWGLILLCGVYDLRELSNTESG------N 184 (270)
T ss_pred HHHhcccce-eEEEcccchHHHHHHHHHHHh----------------cCchHHHHHHHhhHhhHHHHhCCccc------c
Confidence 777766532 399999999997655554431 11478888887754433322111000 0
Q ss_pred CCCChhHHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEE
Q 015317 157 MSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKL 236 (409)
Q Consensus 157 ~p~~~~lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~ 236 (409)
- + + +.-...+.-..++|. + ...+.|.|++.++.|.---.+...+|++.+++ -..
T Consensus 185 d-----l----------g---Lt~~~ae~~Scdl~~-~---~~v~~~ilVv~~~~espklieQnrdf~~q~~~----a~~ 238 (270)
T KOG4627|consen 185 D-----L----------G---LTERNAESVSCDLWE-Y---TDVTVWILVVAAEHESPKLIEQNRDFADQLRK----ASF 238 (270)
T ss_pred c-----c----------C---cccchhhhcCccHHH-h---cCceeeeeEeeecccCcHHHHhhhhHHHHhhh----cce
Confidence 0 0 0 000000111112222 1 24567999999999999999999999998775 456
Q ss_pred EEcCCCccchhh----ccChHHH
Q 015317 237 VKWNSSPHVGHY----RHYPIDY 255 (409)
Q Consensus 237 ~~f~dS~HV~H~----r~hPeeY 255 (409)
..|+++.|-.-+ .++-++|
T Consensus 239 ~~f~n~~hy~I~~~~~~~~s~~~ 261 (270)
T KOG4627|consen 239 TLFKNYDHYDIIEETAIDDSDVS 261 (270)
T ss_pred eecCCcchhhHHHHhccccchHH
Confidence 688999886543 3445555
No 100
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.48 E-value=0.033 Score=52.64 Aligned_cols=63 Identities=19% Similarity=0.302 Sum_probs=55.5
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH--HHHHHHHHHHHHH
Q 015317 202 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI--DYKAAVTELLGKA 266 (409)
Q Consensus 202 ~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe--eY~~aV~~Fl~~~ 266 (409)
.|.|+++|.+|.+||..+.+++++.+++. .++...+++..|..-...++. +|+..+.+|+++.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999988865 578888889999887766675 9999999999874
No 101
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.34 E-value=0.12 Score=51.74 Aligned_cols=40 Identities=25% Similarity=0.325 Sum_probs=33.3
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcC
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWN 240 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~ 240 (409)
..|.-++||.+|.++|.+...-.+++.++.+.+|+..-|.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 4799999999999999999988999888877666655554
No 102
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=95.26 E-value=3.3 Score=41.85 Aligned_cols=65 Identities=14% Similarity=0.222 Sum_probs=45.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKA 266 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~ 266 (409)
....|.+||++++|.+.++....+++++.-.+ .-+.++.+|..|--+ ..+|++-.+++.+|+++.
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~--l~~~vv~~~~gH~vq-qe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKDVPR--LTERVVIEGIGHFVQ-QEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHhhcc--ccceEEecCCccccc-ccCHHHHHHHHHHHHHhh
Confidence 46689999999999999999555555443211 224556665555433 347999999999999874
No 103
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.22 E-value=1.5 Score=42.57 Aligned_cols=212 Identities=16% Similarity=0.153 Sum_probs=108.0
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcC--CcEEEEccccccccCchhhhHHHHHHHHHHHHHhc--CCCCcEEEEEcc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLG--WNSLICHSQFLNMFFPEKAESLALDVLKELVEELK--FGPCPVVFASFS 94 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG--~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~--~~~~pIl~H~FS 94 (409)
.++-++.|...|+....-..+.. ++= ..++.++.+...--..+....-...+.++|..+.. ....|..|.|+|
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~---~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSR---RLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHh---hCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 46677788999988765444444 222 23355665554322222211111223344444433 345789999999
Q ss_pred CcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhh--------h-hhccccccCCCChhHHH
Q 015317 95 GGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGAR--------F-AVHPSVLNMSHPPRLVS 165 (409)
Q Consensus 95 nGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~--------~-al~~ai~~~p~~~~lv~ 165 (409)
|||.. .+.+++.+++. .. .+.++++=+|..-.. ..+.. + ..-..+..+| +.++.
T Consensus 83 mGa~l-AfEvArrl~~~-----------g~--~p~~lfisg~~aP~~-~~~~~i~~~~D~~~l~~l~~lgG~p--~e~le 145 (244)
T COG3208 83 MGAML-AFEVARRLERA-----------GL--PPRALFISGCRAPHY-DRGKQIHHLDDADFLADLVDLGGTP--PELLE 145 (244)
T ss_pred hhHHH-HHHHHHHHHHc-----------CC--CcceEEEecCCCCCC-cccCCccCCCHHHHHHHHHHhCCCC--hHHhc
Confidence 99964 56677766543 11 234444444332211 00000 0 0000111111 11100
Q ss_pred HHHHHHHHhHhHHhhhhccchhhHHHH----HhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCC
Q 015317 166 RIANGIASGLDAFFLNRFESHRAEYWQ----TLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS 241 (409)
Q Consensus 166 ~~~~~i~~~l~~l~~~~f~~~~~~~~~----~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d 241 (409)
. .-+..++++.+ +++|.- ......+..+|+..+.|++|..|.++++.+..+..+ .+.++..|+|
T Consensus 146 ---d---~El~~l~LPil---RAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~---~~f~l~~fdG 213 (244)
T COG3208 146 ---D---PELMALFLPIL---RADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK---GDFTLRVFDG 213 (244)
T ss_pred ---C---HHHHHHHHHHH---HHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc---CCceEEEecC
Confidence 0 00111222221 222221 011224677999999999999999999888777665 3578888875
Q ss_pred CccchhhccChHHHHHHHHHHHH
Q 015317 242 SPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 242 S~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
.|- ++.+..++-.+.|.+.+.
T Consensus 214 -gHF-fl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 214 -GHF-FLNQQREEVLARLEQHLA 234 (244)
T ss_pred -cce-ehhhhHHHHHHHHHHHhh
Confidence 454 555666666666666664
No 104
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.14 E-value=0.33 Score=54.52 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=57.1
Q ss_pred CCCE-EEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhh
Q 015317 201 GAPY-LILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAV 269 (409)
Q Consensus 201 ~~P~-LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~ 269 (409)
+.|. |+|||+.|+-|+.+.-..++++++.+|.+.+++.|+|+.|-=-.+..-..+...+..|+..|+..
T Consensus 681 ~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 681 KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 3455 99999999999999999999999999999999999999997555444356667788888766543
No 105
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.02 E-value=0.55 Score=51.23 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=58.7
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
+...|.+||--|.=|...+...++.++-+.|-.-++++|++-.|-=--....+-|...+..|+++
T Consensus 802 pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 802 PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 34689999999999999999999999999999999999999999877777788899999999986
No 106
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=94.95 E-value=0.044 Score=56.40 Aligned_cols=173 Identities=10% Similarity=0.036 Sum_probs=73.1
Q ss_pred CCcEEEEecccCChHHHH-----------------HHHHHHHHHcCCcEEEEccccccc-------cC--c---------
Q 015317 19 REGIVVVFAWMSSEERQL-----------------KRFVQLYSSLGWNSLICHSQFLNM-------FF--P--------- 63 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl-----------------~KYa~lY~~lG~nvLvv~s~~~~~-------~~--p--------- 63 (409)
.|.|+++||=.+.+++-+ .-|+..+.+.||-||.++.....= .. .
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 456777777654444322 126778899999999997743110 00 0
Q ss_pred ------hhhhH---HHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEec
Q 015317 64 ------EKAES---LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYD 134 (409)
Q Consensus 64 ------~~~~~---~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~D 134 (409)
+.... ....+|++|.......+..|.+-||||||..+|.. -. +-++|++.|.=
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L--aA----------------LDdRIka~v~~ 256 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL--AA----------------LDDRIKATVAN 256 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH--HH----------------H-TT--EEEEE
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH--HH----------------cchhhHhHhhh
Confidence 00000 11233344433222234679999999999753332 11 22589999988
Q ss_pred CCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCc
Q 015317 135 SSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDL 214 (409)
Q Consensus 135 S~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~l 214 (409)
++.+.+.+.... + +++.... .+. .-..+. .+.+++.+ ..++.+-.. ..-+.|.|++-|..|.+
T Consensus 257 ~~l~~~~~~~~~-m----t~~~~~~-~~~-------~~~~~~-~~iPgl~r-~~D~PdIas--liAPRPll~~nG~~Dkl 319 (390)
T PF12715_consen 257 GYLCTTQERALL-M----TMPNNNG-LRG-------FPNCIC-NYIPGLWR-YFDFPDIAS--LIAPRPLLFENGGKDKL 319 (390)
T ss_dssp S-B--HHHHHHH-B--------TTS------------SS-GG-G--TTCCC-C--HHHHHH--TTTTS-EEESS-B-HHH
T ss_pred hhhhccchhhHh-h----ccccccc-cCc-------Ccchhh-hhCccHHh-hCccHHHHH--HhCCCcchhhcCCcccc
Confidence 876655421100 1 1110000 000 000001 11222221 122223211 12246999999999999
Q ss_pred cChHHHHHHHHHHH
Q 015317 215 APYQVIYNFAQRLC 228 (409)
Q Consensus 215 VP~~~Ve~~a~~~r 228 (409)
.|. |++-|+.+.
T Consensus 320 f~i--V~~AY~~~~ 331 (390)
T PF12715_consen 320 FPI--VRRAYAIMG 331 (390)
T ss_dssp HHH--HHHHHHHTT
T ss_pred cHH--HHHHHHhcC
Confidence 855 777777643
No 107
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=94.85 E-value=0.14 Score=55.01 Aligned_cols=105 Identities=8% Similarity=-0.036 Sum_probs=63.9
Q ss_pred CCcEEEEecccCChH---HHHHHHHHHHHHcCCcEEEEccccccc-----c-CchhhhHHHHHHHHHHHHHhcCCCCcEE
Q 015317 19 REGIVVVFAWMSSEE---RQLKRFVQLYSSLGWNSLICHSQFLNM-----F-FPEKAESLALDVLKELVEELKFGPCPVV 89 (409)
Q Consensus 19 ~kplVVl~GW~gA~~---rhl~KYa~lY~~lG~nvLvv~s~~~~~-----~-~p~~~~~~a~~vL~~L~~~~~~~~~pIl 89 (409)
.+.||+++||..... .....+.+.+.+.||.|++++.+.... . .......-+.++|+++.+.. ....+|.
T Consensus 22 ~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~-~~~~~v~ 100 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQP-WCDGNVG 100 (550)
T ss_pred CCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCC-CCCCcEE
Confidence 455666778865432 122346778899999999987764211 0 10111234456777776542 2235799
Q ss_pred EEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCcc
Q 015317 90 FASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFT 141 (409)
Q Consensus 90 ~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~ 141 (409)
+.|+|+||.+++..... ..+.++++|..++..+..
T Consensus 101 ~~G~S~GG~~a~~~a~~-----------------~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 101 MLGVSYLAVTQLLAAVL-----------------QPPALRAIAPQEGVWDLY 135 (550)
T ss_pred EEEeChHHHHHHHHhcc-----------------CCCceeEEeecCcccchh
Confidence 99999999754433211 124789999888766553
No 108
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=94.47 E-value=0.85 Score=46.49 Aligned_cols=110 Identities=15% Similarity=0.016 Sum_probs=63.9
Q ss_pred CCcEEEEecccCChHHHH------HHHHHHHHHcCCcEEEEcccccc--ccCchhh--hHHHHHHHHHHHHHhc-CCCCc
Q 015317 19 REGIVVVFAWMSSEERQL------KRFVQLYSSLGWNSLICHSQFLN--MFFPEKA--ESLALDVLKELVEELK-FGPCP 87 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl------~KYa~lY~~lG~nvLvv~s~~~~--~~~p~~~--~~~a~~vL~~L~~~~~-~~~~p 87 (409)
+|++++..|=.++=+.+. ....+++..+|-||+++..+... -+.++.. ...+..+++.|.++.. ..+..
T Consensus 137 ~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~ 216 (365)
T PF05677_consen 137 QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKN 216 (365)
T ss_pred CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChhe
Confidence 678887776555544422 34667788899999998766532 2333321 1234445566554332 13355
Q ss_pred EEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCce-EEEecCCCCCcc
Q 015317 88 VVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFS-GQIYDSSPVDFT 141 (409)
Q Consensus 88 Il~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~Vk-G~I~DS~P~~~~ 141 (409)
|+++|.|.||+.+..++-+ . .++ -.+.|+ .+|-|.+|.++.
T Consensus 217 Ii~yG~SLGG~Vqa~AL~~----~---~~~------~~dgi~~~~ikDRsfssl~ 258 (365)
T PF05677_consen 217 IILYGHSLGGGVQAEALKK----E---VLK------GSDGIRWFLIKDRSFSSLA 258 (365)
T ss_pred EEEeeccccHHHHHHHHHh----c---ccc------cCCCeeEEEEecCCcchHH
Confidence 9999999999864332221 1 000 112355 678899887654
No 109
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=94.36 E-value=1.4 Score=42.58 Aligned_cols=81 Identities=10% Similarity=0.050 Sum_probs=52.4
Q ss_pred HHHcCCcEEEEcccccc----ccC--chhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccc
Q 015317 43 YSSLGWNSLICHSQFLN----MFF--PEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKL 116 (409)
Q Consensus 43 Y~~lG~nvLvv~s~~~~----~~~--p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l 116 (409)
|.+.||.+++++.+... .+. ......-+.++|+||... +-.+..|.+.|.|-+|.+++....+
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~---------- 121 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAAR---------- 121 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTT----------
T ss_pred HHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhc----------
Confidence 99999999998776421 111 222345667899998875 4444679999999999765444221
Q ss_pred cccchhccccCceEEEecCCCCCcc
Q 015317 117 SLDDRQLVRDCFSGQIYDSSPVDFT 141 (409)
Q Consensus 117 ~~~~~~~l~~~VkG~I~DS~P~~~~ 141 (409)
-.+.+|++|--++..+..
T Consensus 122 -------~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 122 -------RPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp -------T-TTEEEEEEESE-SBTC
T ss_pred -------CCCCceEEEecccCCccc
Confidence 125789999888777664
No 110
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=94.30 E-value=0.52 Score=46.09 Aligned_cols=65 Identities=9% Similarity=0.071 Sum_probs=46.7
Q ss_pred CCCCCCEEEEecC------CCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH-HHHHHHHHHH
Q 015317 198 VRFGAPYLILCSE------DDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI-DYKAAVTELL 263 (409)
Q Consensus 198 ~~~~~P~LyIYS~------~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe-eY~~aV~~Fl 263 (409)
.+.....|-|||. .|-+||..+++.+--..+.+....++..+.|. ++.|-..|.- +=.+.|.+||
T Consensus 181 ~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~-~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 181 FPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK-DAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp STTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG-GGSCCGGGCCHHHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC-CCccccCCCCHHHHHHHHHHh
Confidence 3556789999998 99999999999999888887777888888763 4555555432 2335555664
No 111
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.18 E-value=0.25 Score=49.20 Aligned_cols=97 Identities=18% Similarity=0.076 Sum_probs=58.7
Q ss_pred CCCceeeeeccCC-CCCCCcEE-EEecccCC--hHHHHHHHHHHHHHcCCcEEEEcccc--------ccccCchhh---h
Q 015317 3 GFGGRYYWGRKER-GGRREGIV-VVFAWMSS--EERQLKRFVQLYSSLGWNSLICHSQF--------LNMFFPEKA---E 67 (409)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~kplV-Vl~GW~gA--~~rhl~KYa~lY~~lG~nvLvv~s~~--------~~~~~p~~~---~ 67 (409)
+.++|.||-..+. ..+++||| +|||=.++ ...|..-+-++-.+.||=|+..+.-. ...+.|+.. .
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ 122 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGV 122 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCc
Confidence 3567899998854 22344555 55554443 33444455677777888777764422 122335531 1
Q ss_pred -H--HHHHHHHHHHHHhcCCCCcEEEEEccCcHHH
Q 015317 68 -S--LALDVLKELVEELKFGPCPVVFASFSGGPKA 99 (409)
Q Consensus 68 -~--~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~ 99 (409)
+ ...+++..|+.+....+..|.+-|.||||.+
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~M 157 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRM 157 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHH
Confidence 1 2245566666666666778999999999975
No 112
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=94.11 E-value=1.1 Score=46.90 Aligned_cols=65 Identities=26% Similarity=0.351 Sum_probs=49.0
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChH----HHHH----HHHHHHHHH
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPI----DYKA----AVTELLGKA 266 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPe----eY~~----aV~~Fl~~~ 266 (409)
...++|.+.+++++|.++||++|...+.... .+|+.+. -+|+|.+.+--||. .||. ....++..+
T Consensus 327 ~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~---g~~~f~l-~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 327 GDITCPVYNLAAEEDHIAPWSSVYLGARLLG---GEVTFVL-SRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred hhcccceEEEeecccccCCHHHHHHHHHhcC---CceEEEE-ecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 3578999999999999999999988776544 4666655 47999999988775 4555 455555444
No 113
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=94.11 E-value=0.17 Score=48.48 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhhhh
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYS 271 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~~~ 271 (409)
++.+|.|-|+|+.|++||.+.++.+|+..++. .+..+..+| +-=....|.+.|.+|++.......
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~HpggH---~VP~~~~~~~~i~~fi~~~~~~~~ 225 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEHPGGH---IVPNKAKYKEKIADFIQSFLQEES 225 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEecCCCc---cCCCchHHHHHHHHHHHHHHHhhh
Confidence 56789999999999999999999999987753 555555554 477778999999999987554433
No 114
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=94.00 E-value=0.41 Score=45.34 Aligned_cols=60 Identities=22% Similarity=0.282 Sum_probs=45.6
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..|.+..|++.|++||.+--++..+..++.|..++..-+++-.| .-. |+| .+.|..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h---~~~-~~e-~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGH---STS-PQE-LDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccc---ccc-HHH-HHHHHHHHHH
Confidence 36999999999999999999999999999987766666665555 332 343 3566677765
No 115
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=93.97 E-value=0.48 Score=45.47 Aligned_cols=90 Identities=19% Similarity=0.266 Sum_probs=56.3
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEE--Ec-cccc---cccCchhhhHHHHHHHHHHHHHhcCC--CCcEEE
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLI--CH-SQFL---NMFFPEKAESLALDVLKELVEELKFG--PCPVVF 90 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLv--v~-s~~~---~~~~p~~~~~~a~~vL~~L~~~~~~~--~~pIl~ 90 (409)
..-+|.||||...-+.-+..++++..++++...+ +. +... .+...+.....+.+.+.+++..+... ...|.+
T Consensus 18 ~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~i 97 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHI 97 (233)
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEE
Confidence 5779999999998888899999999999987632 21 2111 11111111122333444444444322 356999
Q ss_pred EEccCcHHHHHHHHHHHH
Q 015317 91 ASFSGGPKACMYKVLQIT 108 (409)
Q Consensus 91 H~FSnGG~~~l~~l~qll 108 (409)
-+.|||+-..+.++.++.
T Consensus 98 laHSMG~rv~~~aL~~l~ 115 (233)
T PF05990_consen 98 LAHSMGNRVLLEALRQLA 115 (233)
T ss_pred EEeCchHHHHHHHHHHHH
Confidence 999999987666655543
No 116
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=93.70 E-value=2.3 Score=41.01 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=46.3
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHH
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTEL 262 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~F 262 (409)
.+..+|.|=.||-.|.+||.++..+|++..+. -++++.+++.|. +-.|..+-.+.+..|
T Consensus 196 Id~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHn--yt~~q~~l~~lgl~f 254 (269)
T KOG4667|consen 196 IDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHN--YTGHQSQLVSLGLEF 254 (269)
T ss_pred cCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcC--ccchhhhHhhhccee
Confidence 46789999999999999999999999998874 578899999997 344444444444444
No 117
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=93.66 E-value=6 Score=36.81 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=41.9
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHH
Q 015317 200 FGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELL 263 (409)
Q Consensus 200 ~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl 263 (409)
.+.+.+.+.++.|++++|+...+.++. ....+.+|+. |--.+-++|...|.+|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~ggd---H~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEEGGD---HSFQDFEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhcC-------ceEEEEeCCC---CCCccHHHHHHHHHHhh
Confidence 346899999999999999877666653 2334557774 55888999999999996
No 118
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=93.07 E-value=0.27 Score=49.79 Aligned_cols=81 Identities=12% Similarity=0.268 Sum_probs=45.7
Q ss_pred CCcEEEEecccCCh--HHHHHHHHHHHHH---cCCcEEEEcccc-ccccCchhh--h----HHHHHHHHHHHHHhcCCCC
Q 015317 19 REGIVVVFAWMSSE--ERQLKRFVQLYSS---LGWNSLICHSQF-LNMFFPEKA--E----SLALDVLKELVEELKFGPC 86 (409)
Q Consensus 19 ~kplVVl~GW~gA~--~rhl~KYa~lY~~---lG~nvLvv~s~~-~~~~~p~~~--~----~~a~~vL~~L~~~~~~~~~ 86 (409)
.+.+|++|||.+.. ...+.+..+.|.+ ..+||++++=.. ..-.+.... . ....++|.+|.+.......
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~ 150 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPE 150 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GG
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChh
Confidence 57899999999976 5678888886555 478998875432 111122111 1 1223455566544433445
Q ss_pred cEEEEEccCcHHH
Q 015317 87 PVVFASFSGGPKA 99 (409)
Q Consensus 87 pIl~H~FSnGG~~ 99 (409)
.|.+-|||.||-+
T Consensus 151 ~ihlIGhSLGAHv 163 (331)
T PF00151_consen 151 NIHLIGHSLGAHV 163 (331)
T ss_dssp GEEEEEETCHHHH
T ss_pred HEEEEeeccchhh
Confidence 6999999999964
No 119
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=92.53 E-value=0.95 Score=42.78 Aligned_cols=86 Identities=14% Similarity=0.069 Sum_probs=46.5
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHH---cCCcE-EEEccccccccCchhh-hHHHHHHHHHHHHHhcC---CCCcEEEE
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSS---LGWNS-LICHSQFLNMFFPEKA-ESLALDVLKELVEELKF---GPCPVVFA 91 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~---lG~nv-Lvv~s~~~~~~~p~~~-~~~a~~vL~~L~~~~~~---~~~pIl~H 91 (409)
.-+|++||..|. ..++....+.... ..++. +++............. ...+..++++|.+..+. ...+|.|-
T Consensus 5 hLvV~vHGL~G~-~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 5 HLVVFVHGLWGN-PADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred EEEEEeCCCCCC-HHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 457888888775 5566555554444 23333 2222211111111111 23556666677665432 22579999
Q ss_pred EccCcHHHHHHHHHH
Q 015317 92 SFSGGPKACMYKVLQ 106 (409)
Q Consensus 92 ~FSnGG~~~l~~l~q 106 (409)
|.|+||..+=+++..
T Consensus 84 gHSLGGli~r~al~~ 98 (217)
T PF05057_consen 84 GHSLGGLIARYALGL 98 (217)
T ss_pred EecccHHHHHHHHHH
Confidence 999999764444443
No 120
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=92.23 E-value=4.5 Score=42.24 Aligned_cols=41 Identities=12% Similarity=0.132 Sum_probs=31.9
Q ss_pred CEEEE-ecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccc
Q 015317 203 PYLIL-CSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHV 245 (409)
Q Consensus 203 P~LyI-YS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV 245 (409)
.++|| +|+.|..+ ++..+++++.++++|.+++...|++ +|-
T Consensus 350 lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd 391 (411)
T PRK10439 350 LRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHD 391 (411)
T ss_pred ceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcC
Confidence 35776 56666444 6788999999999999999999987 463
No 121
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=92.14 E-value=7.4 Score=38.86 Aligned_cols=176 Identities=14% Similarity=0.189 Sum_probs=89.7
Q ss_pred cEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccccccc--Cchhh---hHHHHHHHHHHHHHhcCCCCcEEEEEccC
Q 015317 21 GIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMF--FPEKA---ESLALDVLKELVEELKFGPCPVVFASFSG 95 (409)
Q Consensus 21 plVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~--~p~~~---~~~a~~vL~~L~~~~~~~~~pIl~H~FSn 95 (409)
+||-+||==|+. ...+--+....++|..++.+.-|...+- .++-. ... ...++.|++.+... ..+++-|.|.
T Consensus 37 TVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er-~~~~~~ll~~l~i~-~~~i~~gHSr 113 (297)
T PF06342_consen 37 TVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEER-QNFVNALLDELGIK-GKLIFLGHSR 113 (297)
T ss_pred eEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHH-HHHHHHHHHHcCCC-CceEEEEecc
Confidence 444477665543 3444334467789999988766543221 11100 011 13455677766644 5699999999
Q ss_pred cHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHH----HH
Q 015317 96 GPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIAN----GI 171 (409)
Q Consensus 96 GG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~----~i 171 (409)
|+-..+.. .- ..+..|+++=++||-.. +.++.... .-..+.|+.. .+
T Consensus 114 Gcenal~l----a~---------------~~~~~g~~lin~~G~r~---------HkgIrp~~-r~~~i~~l~~~lp~~~ 164 (297)
T PF06342_consen 114 GCENALQL----AV---------------THPLHGLVLINPPGLRP---------HKGIRPLS-RMETINYLYDLLPRFI 164 (297)
T ss_pred chHHHHHH----Hh---------------cCccceEEEecCCcccc---------ccCcCHHH-HHHHHHHHHHHhhHHH
Confidence 99643322 11 12567888888776432 11110000 0001111111 11
Q ss_pred HHhHh-HHh-hhhccc-------------hhhHHHHHh---hccCCCCCCEEEEecCCCCccChHHHHHHHHHHH
Q 015317 172 ASGLD-AFF-LNRFES-------------HRAEYWQTL---YSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLC 228 (409)
Q Consensus 172 ~~~l~-~l~-~~~f~~-------------~~~~~~~~L---~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r 228 (409)
...+. .+| .-+|+. +..++..++ ..-+..++|.||.||.+|.||--+.++++++..+
T Consensus 165 ~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 165 INAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred HHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 11111 111 011211 111222221 1123445899999999999999999999998664
No 122
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=91.82 E-value=10 Score=34.85 Aligned_cols=100 Identities=17% Similarity=0.054 Sum_probs=58.9
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCc---EEEEccccccccC--chhhhHHHHHHHHHHHHHhcCCCCcEEEEEcc
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWN---SLICHSQFLNMFF--PEKAESLALDVLKELVEELKFGPCPVVFASFS 94 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~n---vLvv~s~~~~~~~--p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FS 94 (409)
++|+++++=.|+.. -|..+=+.+.-+ +..+..+....-. +..-..+|...++.|....+. +|++|-|+|
T Consensus 1 ~~lf~~p~~gG~~~----~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~--gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS----SYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPE--GPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGG----GGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSS--SSEEEEEET
T ss_pred CeEEEEcCCccCHH----HHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCC--CCeeehccC
Confidence 57888888877443 355555555554 4555555543111 112235777777777765543 489999999
Q ss_pred CcHHHHHHHHHHHHhhhhhccccccchhccccCce-EEEecCCCCC
Q 015317 95 GGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFS-GQIYDSSPVD 139 (409)
Q Consensus 95 nGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~Vk-G~I~DS~P~~ 139 (409)
.||.. .+.+.+.|+.. + ..+. -+++|+.|-.
T Consensus 75 ~Gg~l-A~E~A~~Le~~-G------------~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 75 FGGIL-AFEMARQLEEA-G------------EEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHH-HHHHHHHHHHT-T-------------SESEEEEESCSSTT
T ss_pred ccHHH-HHHHHHHHHHh-h------------hccCceEEecCCCCC
Confidence 99975 44455555543 1 1343 4579986543
No 123
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=91.68 E-value=0.2 Score=47.68 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=50.6
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
...++|.|++||+.|++|+-..|.=+-. ... + -+.+.++...|-=|+| +++++.+.|.+|+++
T Consensus 213 p~vkcPtli~hG~kDp~~~~~hv~fi~~-~~~-~--a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 213 PQVKCPTLIMHGGKDPFCGDPHVCFIPV-LKS-L--AKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKS 275 (277)
T ss_pred ccccCCeeEeeCCcCCCCCCCCccchhh-hcc-c--ceEEEccCCCcceeee-chHHHHHHHHHHHhc
Confidence 3567999999999999999887654333 232 2 4677899999998886 789999999999986
No 124
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=91.43 E-value=15 Score=35.87 Aligned_cols=44 Identities=18% Similarity=0.301 Sum_probs=33.8
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccc
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHV 245 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV 245 (409)
..+..++||++|.=||-+..+++.+.......++.... ++=+|.
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~Ha 264 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPHA 264 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCC
Confidence 45778899999999999999999998775444555544 666663
No 125
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.32 E-value=2.9 Score=40.71 Aligned_cols=219 Identities=19% Similarity=0.226 Sum_probs=111.2
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccccc-----------ccCchhhh-HHHHHHHHHHHHHhcCCCC
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLN-----------MFFPEKAE-SLALDVLKELVEELKFGPC 86 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~-----------~~~p~~~~-~~a~~vL~~L~~~~~~~~~ 86 (409)
.+..+++-+=.|-......++++.-.+.||.||+++-+... +.+.+++. +++ .+|+.+.+.++ ..
T Consensus 29 ~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~-aal~~~~~~~~--~~ 105 (281)
T COG4757 29 ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP-AALAALKKALP--GH 105 (281)
T ss_pred CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH-HHHHHHHhhCC--CC
Confidence 35566776666777778899999999999999997654322 22223331 221 23445544443 46
Q ss_pred cEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhcc-ccccCCCChhHHH
Q 015317 87 PVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHP-SVLNMSHPPRLVS 165 (409)
Q Consensus 87 pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~-ai~~~p~~~~lv~ 165 (409)
|+.+-|.|+||-+ .. ++.. -.+.-...||-|.++-... ++.+..+.. .+..+- .+.+..
T Consensus 106 P~y~vgHS~GGqa--~g---L~~~-------------~~k~~a~~vfG~gagwsg~-m~~~~~l~~~~l~~lv-~p~lt~ 165 (281)
T COG4757 106 PLYFVGHSFGGQA--LG---LLGQ-------------HPKYAAFAVFGSGAGWSGW-MGLRERLGAVLLWNLV-GPPLTF 165 (281)
T ss_pred ceEEeecccccee--ec---cccc-------------CcccceeeEeccccccccc-hhhhhcccceeecccc-ccchhh
Confidence 7999999999942 11 1110 0122356888887763321 122111100 010100 111111
Q ss_pred HHH---HHHH-Hh--H-hHHhh--hhccchhhHH--------HHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHH
Q 015317 166 RIA---NGIA-SG--L-DAFFL--NRFESHRAEY--------WQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLC 228 (409)
Q Consensus 166 ~~~---~~i~-~~--l-~~l~~--~~f~~~~~~~--------~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r 228 (409)
|.- +-++ -+ + ...+. .++-++...| .++++ ...++|++++-..+|+-+|+..++.|++--+
T Consensus 166 w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~y--aaVrtPi~~~~~~DD~w~P~As~d~f~~~y~ 243 (281)
T COG4757 166 WKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVY--AAVRTPITFSRALDDPWAPPASRDAFASFYR 243 (281)
T ss_pred ccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHH--HHhcCceeeeccCCCCcCCHHHHHHHHHhhh
Confidence 100 0000 00 0 00000 0111111111 11222 2456899999999999999999999998766
Q ss_pred hCCCceEEEEc-CCCccchhhccChHHHHHHHHHHHH
Q 015317 229 DLGADVKLVKW-NSSPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 229 ~~G~~V~~~~f-~dS~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
+. .+++... +.-.-++|+.-..+.......++++
T Consensus 244 nA--pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 244 NA--PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred cC--cccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 43 2332222 2223477777666655444445443
No 126
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=91.09 E-value=3.6 Score=40.41 Aligned_cols=238 Identities=13% Similarity=0.185 Sum_probs=103.7
Q ss_pred eeeeccCCCCC--CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccC---------chhhhHHHHHHHHH
Q 015317 8 YYWGRKERGGR--REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFF---------PEKAESLALDVLKE 76 (409)
Q Consensus 8 ~~~~~~~~~~~--~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~---------p~~~~~~a~~vL~~ 76 (409)
.-|.-.+..+. .++.|||..-.+.+..|.+--++.....||.|+.|++-. +.+. .+.+..-...+++|
T Consensus 16 ~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~-HvGlSsG~I~eftms~g~~sL~~V~dw 94 (294)
T PF02273_consen 16 RVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLN-HVGLSSGDINEFTMSIGKASLLTVIDW 94 (294)
T ss_dssp EEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHH
T ss_pred EEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccc-cccCCCCChhhcchHHhHHHHHHHHHH
Confidence 45874432222 457777777778888999999999999999999998752 2221 22221222345666
Q ss_pred HHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhh---hccc
Q 015317 77 LVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFA---VHPS 153 (409)
Q Consensus 77 L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~a---l~~a 153 (409)
|.. .. ...+.+-+-|.-|-. .|.+.. + ..+..+|.==+.+++..++..... +...
T Consensus 95 l~~-~g--~~~~GLIAaSLSaRI-Ay~Va~------~------------i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~ 152 (294)
T PF02273_consen 95 LAT-RG--IRRIGLIAASLSARI-AYEVAA------D------------INLSFLITAVGVVNLRDTLEKALGYDYLQLP 152 (294)
T ss_dssp HHH-TT-----EEEEEETTHHHH-HHHHTT------T------------S--SEEEEES--S-HHHHHHHHHSS-GGGS-
T ss_pred HHh-cC--CCcchhhhhhhhHHH-HHHHhh------c------------cCcceEEEEeeeeeHHHHHHHHhccchhhcc
Confidence 652 22 234888888888743 233211 0 123444443344454433322111 0000
Q ss_pred cccCCCChhH-------HHHHHHHHHHhHhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHH
Q 015317 154 VLNMSHPPRL-------VSRIANGIASGLDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQR 226 (409)
Q Consensus 154 i~~~p~~~~l-------v~~~~~~i~~~l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~ 226 (409)
+...|.-.-+ -.|+.- -++......-.++++.....+|.+-+++..|.-|...+|+++...
T Consensus 153 i~~lp~dldfeGh~l~~~vFv~d------------c~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~ 220 (294)
T PF02273_consen 153 IEQLPEDLDFEGHNLGAEVFVTD------------CFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDN 220 (294)
T ss_dssp GGG--SEEEETTEEEEHHHHHHH------------HHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT
T ss_pred hhhCCCcccccccccchHHHHHH------------HHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHh
Confidence 0011110000 001110 011111112234445556679999999999999999999999987
Q ss_pred HHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHhhhhhHHHHHHhhhhcCCCCCCCCcCCcc
Q 015317 227 LCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAGAVYSQRIQRLEREKMGLEGTHDDMADPM 295 (409)
Q Consensus 227 ~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (409)
..+. .++++...||.|= +..+|. .+++|.+..... .+ .|+.... ....+|.||-
T Consensus 221 ~~s~--~~klysl~Gs~Hd--L~enl~----vlrnfy~svtka---ai-ald~~~~---~l~~~~~ep~ 274 (294)
T PF02273_consen 221 INSN--KCKLYSLPGSSHD--LGENLV----VLRNFYQSVTKA---AI-ALDSGSL---DLDIDIIEPT 274 (294)
T ss_dssp -TT----EEEEEETT-SS---TTSSHH----HHHHHHHHHHHH---HH-HHHTT---------------
T ss_pred cCCC--ceeEEEecCccch--hhhChH----HHHHHHHHHHHH---HH-hhcCCce---eeeccccCCC
Confidence 6653 5889999999994 566665 344554433221 13 4544443 2345555554
No 127
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=90.98 E-value=0.59 Score=39.07 Aligned_cols=60 Identities=27% Similarity=0.313 Sum_probs=49.3
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..|.|+|-++.|..+|++..++.++.+.. -.++.+++..|..+...++-- .++|.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~-~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCV-DKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHH-HHHHHHHHHc
Confidence 37999999999999999999999987663 478899999999987555544 4777777764
No 128
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=90.62 E-value=15 Score=37.54 Aligned_cols=48 Identities=23% Similarity=0.313 Sum_probs=42.6
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccCh
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP 252 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hP 252 (409)
|.|++-.+.|.|. ++-..+++++++.|++|+...+++..|+.|....-
T Consensus 270 ~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~ 317 (336)
T KOG1515|consen 270 PTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPS 317 (336)
T ss_pred ceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCc
Confidence 5999999999998 56677889999999999988999999999988774
No 129
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=89.11 E-value=0.92 Score=46.33 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCc
Q 015317 69 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDF 140 (409)
Q Consensus 69 ~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~ 140 (409)
.+..++.+....+.....-|++.|+|.||...+++... -+.|||+|+|.+.-|.
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~------------------YPdVkavvLDAtFDDl 347 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASN------------------YPDVKAVVLDATFDDL 347 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhc------------------CCCceEEEeecchhhh
Confidence 33344555555566656669999999999765554211 1479999999975554
No 130
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=89.04 E-value=5.3 Score=39.96 Aligned_cols=86 Identities=14% Similarity=0.053 Sum_probs=51.3
Q ss_pred CcEEEEecccCChHHHHHHHHHH-HHHcCCcEEEEccccc--cccCchhh---hHHHHHHHHHHHHHhcCCCCcEEEEEc
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQL-YSSLGWNSLICHSQFL--NMFFPEKA---ESLALDVLKELVEELKFGPCPVVFASF 93 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~l-Y~~lG~nvLvv~s~~~--~~~~p~~~---~~~a~~vL~~L~~~~~~~~~pIl~H~F 93 (409)
-|+.+++.-.|.+.---+.+++- -...-..+|..+.+.. +-+-++.. ..+++|+.+-+.+...+.+.+|++-|.
T Consensus 74 gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGH 153 (343)
T KOG2564|consen 74 GPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGH 153 (343)
T ss_pred ccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence 34444444445444345566654 3445556666655442 22333332 246777776666666666778999999
Q ss_pred cCcHHHHHHHHH
Q 015317 94 SGGPKACMYKVL 105 (409)
Q Consensus 94 SnGG~~~l~~l~ 105 (409)
||||+.+.+...
T Consensus 154 SmGGaIav~~a~ 165 (343)
T KOG2564|consen 154 SMGGAIAVHTAA 165 (343)
T ss_pred cccchhhhhhhh
Confidence 999998777643
No 131
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=87.99 E-value=1.8 Score=41.44 Aligned_cols=81 Identities=14% Similarity=0.084 Sum_probs=41.9
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcE--EE---Eccccc-ccc-C----chhhhHHHHHHHHHHHHHhcCCCCc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNS--LI---CHSQFL-NMF-F----PEKAESLALDVLKELVEELKFGPCP 87 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nv--Lv---v~s~~~-~~~-~----p~~~~~~a~~vL~~L~~~~~~~~~p 87 (409)
++|||+|||..+........+++.+.+.||.+ |. +..... ... . -+...+++ .+|+.+++.-. . .
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~-~fI~~Vl~~TG--a-k 76 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLR-AFIDAVLAYTG--A-K 76 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHH-HHHHHHHHHHT-----
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHH-HHHHHHHHhhC--C-E
Confidence 47999999999856666788999999999985 22 222111 000 0 01111232 34444444333 2 6
Q ss_pred EEEEEccCcHHHHHHH
Q 015317 88 VVFASFSGGPKACMYK 103 (409)
Q Consensus 88 Il~H~FSnGG~~~l~~ 103 (409)
|=+-++||||.+.-+.
T Consensus 77 VDIVgHS~G~~iaR~y 92 (219)
T PF01674_consen 77 VDIVGHSMGGTIARYY 92 (219)
T ss_dssp EEEEEETCHHHHHHHH
T ss_pred EEEEEcCCcCHHHHHH
Confidence 9999999999754443
No 132
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=87.74 E-value=3.1 Score=41.34 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=36.9
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccch
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVG 246 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~ 246 (409)
...+.|.|+.-+--|++||+..+-+.++.... +++..+++.=.|-+
T Consensus 256 ~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~---~K~i~iy~~~aHe~ 301 (321)
T COG3458 256 ARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT---SKTIEIYPYFAHEG 301 (321)
T ss_pred HhhccceEEeecccCCCCCChhhHHHhhcccC---CceEEEeecccccc
Confidence 45678999999999999999999999887763 46777776666653
No 133
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=86.25 E-value=8.5 Score=36.69 Aligned_cols=106 Identities=11% Similarity=0.096 Sum_probs=54.1
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHH-H-------cCCcEEEEccccc-cccCchh---hhHHHHHHHHHHHHHh---cC
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYS-S-------LGWNSLICHSQFL-NMFFPEK---AESLALDVLKELVEEL---KF 83 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~-~-------lG~nvLvv~s~~~-~~~~p~~---~~~~a~~vL~~L~~~~---~~ 83 (409)
..||+.|+|=.|+- +.+...+..-. + ..++...++-.-. ..+.... ......+.++.|.+.. ..
T Consensus 4 g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 4 GIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 57999999976653 34444443321 1 1233344332111 1111111 1123334455555544 23
Q ss_pred CCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCC
Q 015317 84 GPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVD 139 (409)
Q Consensus 84 ~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~ 139 (409)
.+.+|++-|.||||..+-..+.. . ......|+++|.=++|-.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~--~------------~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSL--P------------NYDPDSVKTIITLGTPHR 124 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhc--c------------ccccccEEEEEEEcCCCC
Confidence 45679999999999643332211 0 011246888888777754
No 134
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=86.17 E-value=4.5 Score=45.75 Aligned_cols=36 Identities=8% Similarity=0.117 Sum_probs=29.0
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccc
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQ 56 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~ 56 (409)
++||++|||.+.... ...+++.+.+.||.|+.++.+
T Consensus 450 P~VVllHG~~g~~~~-~~~lA~~La~~Gy~VIaiDlp 485 (792)
T TIGR03502 450 PVVIYQHGITGAKEN-ALAFAGTLAAAGVATIAIDHP 485 (792)
T ss_pred cEEEEeCCCCCCHHH-HHHHHHHHHhCCcEEEEeCCC
Confidence 579999999887764 567778888899999988764
No 135
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=84.28 E-value=11 Score=37.19 Aligned_cols=104 Identities=17% Similarity=0.157 Sum_probs=60.2
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccccccCchh--hhHHHHHHHHHHHHHhcCC--------CCcEE
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEK--AESLALDVLKELVEELKFG--------PCPVV 89 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~--~~~~a~~vL~~L~~~~~~~--------~~pIl 89 (409)
+-+|.++|.+ .....-..+.+.-.+.||-|+-++... +..+.. ..+.+.++++|+.+.++.. =..|.
T Consensus 18 PVv~f~~G~~-~~~s~Ys~ll~hvAShGyIVV~~d~~~--~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~ 94 (259)
T PF12740_consen 18 PVVLFLHGFL-LINSWYSQLLEHVASHGYIVVAPDLYS--IGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLA 94 (259)
T ss_pred CEEEEeCCcC-CCHHHHHHHHHHHHhCceEEEEecccc--cCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceE
Confidence 4455556665 454434555555677899888877333 222222 2345667888887644321 13499
Q ss_pred EEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCC
Q 015317 90 FASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVD 139 (409)
Q Consensus 90 ~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~ 139 (409)
+-|.|=||...+..+++..+ .....+++++|+=. |++
T Consensus 95 l~GHSrGGk~Af~~al~~~~------------~~~~~~~~ali~lD-PVd 131 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNAS------------SSLDLRFSALILLD-PVD 131 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcc------------cccccceeEEEEec-ccc
Confidence 99999999764444443211 01124677877766 566
No 136
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.02 E-value=9.8 Score=39.18 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=66.4
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcEEEE---ccccccccC--chhh-hHHHH----HHHHHHHHHhcCCCCcEE
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLIC---HSQFLNMFF--PEKA-ESLAL----DVLKELVEELKFGPCPVV 89 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv---~s~~~~~~~--p~~~-~~~a~----~vL~~L~~~~~~~~~pIl 89 (409)
.-+|.+||+.+.=+.-+...+++-++.|+....+ .+.-..++- .++. ...+. .+|..|.+..+ ...|.
T Consensus 117 ~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--~~~I~ 194 (377)
T COG4782 117 TVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--VKRIY 194 (377)
T ss_pred eEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--CceEE
Confidence 4578889999988888999999999999988332 222222221 1221 12333 34444443322 24599
Q ss_pred EEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCC
Q 015317 90 FASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVD 139 (409)
Q Consensus 90 ~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~ 139 (409)
+-+.|||....|.++-||..+ .++.+...|+-+|+=+.=.|
T Consensus 195 ilAHSMGtwl~~e~LrQLai~---------~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIR---------ADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhcc---------CCcchhhhhhheEeeCCCCC
Confidence 999999998766666665432 12225556777777774343
No 137
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=79.40 E-value=3.3 Score=38.94 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHH
Q 015317 69 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQ 106 (409)
Q Consensus 69 ~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~q 106 (409)
+..+++.+|.+..+..+.+..|.|+||||..+++..++
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHH
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHh
Confidence 44455555555554433348999999999876666443
No 138
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=77.31 E-value=18 Score=39.67 Aligned_cols=65 Identities=26% Similarity=0.188 Sum_probs=56.4
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccCh-HHHHHHHHHHHHHHh
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYP-IDYKAAVTELLGKAG 267 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hP-eeY~~aV~~Fl~~~~ 267 (409)
|.|+--|..|+=|.+.+...|+.++++.|.+|-...=.+++|.+.--.-+ .+++.-+..|+.+.+
T Consensus 582 ~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 582 PTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 68888899999999999999999999999888888888999998776666 678888889988754
No 139
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=75.70 E-value=1.1e+02 Score=31.93 Aligned_cols=218 Identities=17% Similarity=0.193 Sum_probs=110.8
Q ss_pred eeeeecc-CCCCC--CCcEEE-Eeccc---CChHHHHHHHHHHHHHcCCcE-EEEcccc-----ccccCchhhhHHHHHH
Q 015317 7 RYYWGRK-ERGGR--REGIVV-VFAWM---SSEERQLKRFVQLYSSLGWNS-LICHSQF-----LNMFFPEKAESLALDV 73 (409)
Q Consensus 7 ~~~~~~~-~~~~~--~kplVV-l~GW~---gA~~rhl~KYa~lY~~lG~nv-Lvv~s~~-----~~~~~p~~~~~~a~~v 73 (409)
+.||-.| +.++. +.|||| +||-. +..+.++.-...+|+.+.-.+ |+.+-.. .+.-+|..-.++. ..
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv-~~ 184 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLV-AT 184 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHH-HH
Confidence 4699987 32221 235444 55542 357788888888888877333 3333322 2334555433332 23
Q ss_pred HHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccc---hhhhhhhh
Q 015317 74 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTS---DLGARFAV 150 (409)
Q Consensus 74 L~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~---~~g~~~al 150 (409)
-+.|++.... ..|++-|=|.||-..+ +++|.++.. + .+ ..-+..|+-|+=+.... .-+.-+.-
T Consensus 185 Y~~Lv~~~G~--~nI~LmGDSAGGnL~L-s~LqyL~~~-~---------~~-~~Pk~~iLISPWv~l~~~~~~~~~~~~~ 250 (374)
T PF10340_consen 185 YDYLVESEGN--KNIILMGDSAGGNLAL-SFLQYLKKP-N---------KL-PYPKSAILISPWVNLVPQDSQEGSSYHD 250 (374)
T ss_pred HHHHHhccCC--CeEEEEecCccHHHHH-HHHHHHhhc-C---------CC-CCCceeEEECCCcCCcCCCCCCCccccc
Confidence 4566643332 3499999999997533 356655431 1 11 12378899995444431 00000000
Q ss_pred ccccccCCCChhHHHHHHHHHHHh----HhHHh---hhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHH
Q 015317 151 HPSVLNMSHPPRLVSRIANGIASG----LDAFF---LNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNF 223 (409)
Q Consensus 151 ~~ai~~~p~~~~lv~~~~~~i~~~----l~~l~---~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~ 223 (409)
. .-.-+-....+-.+ ....+.. ..... .+.-.....+.|..+.. ..-.+++||+.+.+-+ +|+++
T Consensus 251 n-~~~D~l~~~~~~~~-~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~----~~~vfVi~Ge~Evfrd--dI~~~ 322 (374)
T PF10340_consen 251 N-EKRDMLSYKGLSMF-GDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILK----KYSVFVIYGEDEVFRD--DILEW 322 (374)
T ss_pred c-ccccccchhhHHHH-HHhhccccccccccccCCccCcccCCChhHHHHhcc----CCcEEEEECCccccHH--HHHHH
Confidence 0 00000000011001 1111111 00000 01001123456776621 2468999999998875 99999
Q ss_pred HHHHHhCC-----CceEEEEcCCCccchh
Q 015317 224 AQRLCDLG-----ADVKLVKWNSSPHVGH 247 (409)
Q Consensus 224 a~~~r~~G-----~~V~~~~f~dS~HV~H 247 (409)
++.+.+.+ ..++...=++..|++=
T Consensus 323 ~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 323 AKKLNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred HHHHhhcCccccCCcceEEEecCCccccc
Confidence 99988543 2366677788999983
No 140
>PRK04940 hypothetical protein; Provisional
Probab=75.06 E-value=72 Score=29.71 Aligned_cols=54 Identities=11% Similarity=0.008 Sum_probs=44.2
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHH
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..+.+-.+.|++.+|++..+.+...- ....++|+.|- -.+-++|...|.+|+++
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y~~~y------~~~v~~GGdH~---f~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEELHPYY------EIVWDEEQTHK---FKNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHhccCc------eEEEECCCCCC---CCCHHHHHHHHHHHHhc
Confidence 45889999999999999998886431 35577888876 78889999999999854
No 141
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=68.10 E-value=28 Score=32.83 Aligned_cols=95 Identities=20% Similarity=0.315 Sum_probs=55.0
Q ss_pred cEEEEe----cccCChHHHHHHHHHHHHHcCCcEEEEccccccccCchhh-hHHHHHHHHHHHHHhcC--CCCcEEEEEc
Q 015317 21 GIVVVF----AWMSSEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKA-ESLALDVLKELVEELKF--GPCPVVFASF 93 (409)
Q Consensus 21 plVVl~----GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~-~~~a~~vL~~L~~~~~~--~~~pIl~H~F 93 (409)
.++|++ ||.+.. ..-++..++.|+.|+-+++.- +||.++. .+.|.++ ..++..+.. ....+++-|+
T Consensus 3 t~~v~~SGDgGw~~~d----~~~a~~l~~~G~~VvGvdsl~--Yfw~~rtP~~~a~Dl-~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLD----KQIAEALAKQGVPVVGVDSLR--YFWSERTPEQTAADL-ARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhh----HHHHHHHHHCCCeEEEechHH--HHhhhCCHHHHHHHH-HHHHHHHHHHhCCceEEEEee
Confidence 455665 454322 335677889999999887643 4665443 2334332 233332221 2356999999
Q ss_pred cCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecC
Q 015317 94 SGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDS 135 (409)
Q Consensus 94 SnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS 135 (409)
|.|+-. +-.+... |+ ..++.+|+++++=+
T Consensus 76 SFGADv-lP~~~nr--------Lp----~~~r~~v~~v~Ll~ 104 (192)
T PF06057_consen 76 SFGADV-LPFIYNR--------LP----AALRARVAQVVLLS 104 (192)
T ss_pred cCCchh-HHHHHhh--------CC----HHHHhheeEEEEec
Confidence 999954 2222221 12 23566888888877
No 142
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=64.26 E-value=31 Score=34.37 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=49.7
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcC-CcEEEEccccccccCchhhh--HHHHHHHHHHHHHhcC--------CCCcE
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLG-WNSLICHSQFLNMFFPEKAE--SLALDVLKELVEELKF--------GPCPV 88 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG-~nvLvv~s~~~~~~~p~~~~--~~a~~vL~~L~~~~~~--------~~~pI 88 (409)
+-++++|||+-. -.-|.++.+-.. +.-+++.++....+.|+... +.+..+++||.+.++. .-..+
T Consensus 47 PVilF~HG~~l~----ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 47 PVILFLHGFNLY----NSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred cEEEEeechhhh----hHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 336677888753 244777665443 33466666666666665542 4667888888765321 11359
Q ss_pred EEEEccCcHHHHHH
Q 015317 89 VFASFSGGPKACMY 102 (409)
Q Consensus 89 l~H~FSnGG~~~l~ 102 (409)
.+-|.|-||.+...
T Consensus 123 al~GHSrGGktAFA 136 (307)
T PF07224_consen 123 ALSGHSRGGKTAFA 136 (307)
T ss_pred EEeecCCccHHHHH
Confidence 99999999976433
No 143
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=63.85 E-value=1.4e+02 Score=32.16 Aligned_cols=190 Identities=15% Similarity=0.211 Sum_probs=99.8
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEE-Ecccccc--ccCchh-hhHHHHHHHHHHHHHhcCCCCcEEEEEcc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLI-CHSQFLN--MFFPEK-AESLALDVLKELVEELKFGPCPVVFASFS 94 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLv-v~s~~~~--~~~p~~-~~~~a~~vL~~L~~~~~~~~~pIl~H~FS 94 (409)
.|||.|=|+-.--.+. ..-| -+.+.+|..-|+ .+++... |...+. ...-..++|...++.+..+...+++-|.|
T Consensus 288 KPPL~VYFSGyR~aEG-FEgy-~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSGlS 365 (511)
T TIGR03712 288 KPPLNVYFSGYRPAEG-FEGY-FMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSGLS 365 (511)
T ss_pred CCCeEEeeccCcccCc-chhH-HHHHhcCCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeecccc
Confidence 5899998876543332 2222 134567766655 4565532 222222 22333456666667777777779999999
Q ss_pred CcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHHh
Q 015317 95 GGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASG 174 (409)
Q Consensus 95 nGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~~ 174 (409)
||-..++|...+ .+-+++|.= .+...+|+ +|....+ ..|.-. .+..-.+...
T Consensus 366 MGTfgAlYYga~-------------------l~P~AIiVg----KPL~NLGt-iA~n~rL---~RP~~F-~TslDvl~~~ 417 (511)
T TIGR03712 366 MGTFGALYYGAK-------------------LSPHAIIVG----KPLVNLGT-IASRMRL---DRPDEF-GTALDILLLN 417 (511)
T ss_pred ccchhhhhhccc-------------------CCCceEEEc----Ccccchhh-hhccccc---cCCCCC-chHHHhHHhh
Confidence 999766665332 133456543 33333455 2212122 211110 0100000000
Q ss_pred HhHHhhhhccchhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc
Q 015317 175 LDAFFLNRFESHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW 239 (409)
Q Consensus 175 l~~l~~~~f~~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f 239 (409)
.-.+-....+.....||+.+....-.++..-+-|=++|+.=+ ...+++.+.+.+.|..|...-+
T Consensus 418 ~g~~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDYD~-~A~~~L~~~l~~~~~~v~~kG~ 481 (511)
T TIGR03712 418 TGGTSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDYDP-TAFQDLLPYLSKQGAQVMSKGI 481 (511)
T ss_pred cCCCCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccCCH-HHHHHHHHHHHhcCCEEEecCC
Confidence 000001112334456898887665566778888888888754 5667777777776665554444
No 144
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=63.52 E-value=12 Score=39.00 Aligned_cols=39 Identities=31% Similarity=0.302 Sum_probs=35.1
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCC
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNS 241 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d 241 (409)
-.+..||..|+++|.++=+++++..+++|.++++....+
T Consensus 295 ~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkd 333 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKD 333 (403)
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 456699999999999999999999999999999988833
No 145
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=61.33 E-value=49 Score=32.93 Aligned_cols=102 Identities=13% Similarity=0.036 Sum_probs=43.8
Q ss_pred CCCcEEEEecccCC--hHHHHHHHHHHHHHcCCcEEEEcccccc---------ccCchhhhHHHHHHHHHHHHHhcCCCC
Q 015317 18 RREGIVVVFAWMSS--EERQLKRFVQLYSSLGWNSLICHSQFLN---------MFFPEKAESLALDVLKELVEELKFGPC 86 (409)
Q Consensus 18 ~~kplVVl~GW~gA--~~rhl~KYa~lY~~lG~nvLvv~s~~~~---------~~~p~~~~~~a~~vL~~L~~~~~~~~~ 86 (409)
+.+||||.||-.++ .+.-|....++-++.-+.+.+..-.... +|..-. .-. +.+.+.+...+.-..
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~--~Qv-~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVN--DQV-EQVCEQLANDPELAN 80 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHH--HHH-HHHHHHHHH-GGGTT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHH--HHH-HHHHHHHhhChhhhc
Confidence 37899999999863 3333555556666677877554333211 111100 111 122223322222123
Q ss_pred cEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCC
Q 015317 87 PVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 138 (409)
Q Consensus 87 pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~ 138 (409)
-+-+-|||=||- ++.++.| +|.. .+|+-+|-=++|-
T Consensus 81 G~~~IGfSQGgl-~lRa~vq----~c~~-----------~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGL-FLRAYVQ----RCND-----------PPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHH-HHHHHHH----H-TS-----------S-EEEEEEES--T
T ss_pred ceeeeeeccccH-HHHHHHH----HCCC-----------CCceeEEEecCcc
Confidence 478889999995 3555555 3332 2577777655553
No 146
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=57.05 E-value=1.7e+02 Score=27.34 Aligned_cols=142 Identities=15% Similarity=0.207 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccccc---c--Cchhh---hHHH-HHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHH
Q 015317 34 RQLKRFVQLYSSLGWNSLICHSQFLNM---F--FPEKA---ESLA-LDVLKELVEELKFGPCPVVFASFSGGPKACMYKV 104 (409)
Q Consensus 34 rhl~KYa~lY~~lG~nvLvv~s~~~~~---~--~p~~~---~~~a-~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l 104 (409)
.-|..-++.+...||-|..+.-++.-- . -|..+ ...+ ...+.+|.... ...|+++=|-||||-+ ...+
T Consensus 30 t~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l--~~gpLi~GGkSmGGR~-aSmv 106 (213)
T COG3571 30 TSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL--AEGPLIIGGKSMGGRV-ASMV 106 (213)
T ss_pred HHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc--cCCceeeccccccchH-HHHH
Confidence 457788889999999998876655211 1 11111 1111 11122333322 2468999999999953 1222
Q ss_pred HHHHhhhhhccccccchhccccCceEEEecCCCCCccchhhhhhhhccccccCCCChhHHHHHHHHHHHhHhHHhhhhcc
Q 015317 105 LQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFTSDLGARFAVHPSVLNMSHPPRLVSRIANGIASGLDAFFLNRFE 184 (409)
Q Consensus 105 ~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~~~~g~~~al~~ai~~~p~~~~lv~~~~~~i~~~l~~l~~~~f~ 184 (409)
..-+ .-+|.++++=+-|.... . | | .++
T Consensus 107 ade~----------------~A~i~~L~clgYPfhpp-----------G--K-P--e~~--------------------- 133 (213)
T COG3571 107 ADEL----------------QAPIDGLVCLGYPFHPP-----------G--K-P--EQL--------------------- 133 (213)
T ss_pred HHhh----------------cCCcceEEEecCccCCC-----------C--C-c--ccc---------------------
Confidence 2211 12477777655443321 0 0 1 111
Q ss_pred chhhHHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCcc
Q 015317 185 SHRAEYWQTLYSSVRFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPH 244 (409)
Q Consensus 185 ~~~~~~~~~L~~~~~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~H 244 (409)
+.. +-...++|.||.+++.|.+-.-+.|-..+- .-.++.+..+++.|
T Consensus 134 --Rt~------HL~gl~tPtli~qGtrD~fGtr~~Va~y~l-----s~~iev~wl~~adH 180 (213)
T COG3571 134 --RTE------HLTGLKTPTLITQGTRDEFGTRDEVAGYAL-----SDPIEVVWLEDADH 180 (213)
T ss_pred --hhh------hccCCCCCeEEeecccccccCHHHHHhhhc-----CCceEEEEeccCcc
Confidence 010 112456899999999999999888833221 12466666677766
No 147
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=56.34 E-value=58 Score=33.64 Aligned_cols=92 Identities=20% Similarity=0.266 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHcCCcE--EEEcccccccc-CchhhhHHHHHHHHHHHHH-hcCCCCcEEEEEccCcHHHHHHHHHHHHhh
Q 015317 35 QLKRFVQLYSSLGWNS--LICHSQFLNMF-FPEKAESLALDVLKELVEE-LKFGPCPVVFASFSGGPKACMYKVLQITEG 110 (409)
Q Consensus 35 hl~KYa~lY~~lG~nv--Lvv~s~~~~~~-~p~~~~~~a~~vL~~L~~~-~~~~~~pIl~H~FSnGG~~~l~~l~qll~~ 110 (409)
...+.++...++||.. .+...++ ++- .+........ -|+.++++ .+....+++|-++||||....+ +++...
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pY-DWR~~~~~~~~~~~-~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~-fl~~~~- 141 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPY-DWRLSPAERDEYFT-KLKQLIEEAYKKNGKKVVLIAHSMGGLVARY-FLQWMP- 141 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEee-chhhchhhHHHHHH-HHHHHHHHHHHhcCCcEEEEEeCCCchHHHH-HHHhcc-
Confidence 5677888888999987 2332222 221 1221112222 23344433 2333678999999999976444 333221
Q ss_pred hhhccccccchhccccCceEEEecCCCCC
Q 015317 111 ICEAKLSLDDRQLVRDCFSGQIYDSSPVD 139 (409)
Q Consensus 111 ~~~~~l~~~~~~~l~~~VkG~I~DS~P~~ 139 (409)
.+.. ..+.|+.+|.=++|-.
T Consensus 142 -------~~~W--~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 142 -------QEEW--KDKYIKRFISIGTPFG 161 (389)
T ss_pred -------chhh--HHhhhhEEEEeCCCCC
Confidence 0001 1247899999998854
No 148
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=56.22 E-value=22 Score=39.13 Aligned_cols=49 Identities=12% Similarity=0.218 Sum_probs=42.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhcc
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRH 250 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~ 250 (409)
.++.|.||+-+.+|.+++...+|++.++++. .++++..+++.|-.-..+
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIPK 350 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCCc
Confidence 3568999999999999999999999999885 488999999999765554
No 149
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=55.56 E-value=20 Score=36.32 Aligned_cols=103 Identities=15% Similarity=0.051 Sum_probs=54.4
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcE---EEEccccccccCchhhhHHHHH---HHHHHHHHhcCCCCcEEEEE
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNS---LICHSQFLNMFFPEKAESLALD---VLKELVEELKFGPCPVVFAS 92 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nv---Lvv~s~~~~~~~p~~~~~~a~~---vL~~L~~~~~~~~~pIl~H~ 92 (409)
.-|+|++||- +....++..-...+...||.. ..+..+.. ....+....+.. .+++++.... ..+|.+.|
T Consensus 59 ~~pivlVhG~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~g--a~~v~Lig 133 (336)
T COG1075 59 KEPIVLVHGL-GGGYGNFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTG--AKKVNLIG 133 (336)
T ss_pred CceEEEEccC-cCCcchhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcC--CCceEEEe
Confidence 4599999998 445555666666688888884 22222211 111111111222 2233332222 25699999
Q ss_pred ccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCcc
Q 015317 93 FSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDFT 141 (409)
Q Consensus 93 FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~~ 141 (409)
+||||....|- .+-+. -...|+.++.=++|-..+
T Consensus 134 HS~GG~~~ry~-~~~~~--------------~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 134 HSMGGLDSRYY-LGVLG--------------GANRVASVVTLGTPHHGT 167 (336)
T ss_pred ecccchhhHHH-HhhcC--------------ccceEEEEEEeccCCCCc
Confidence 99999754432 22111 014677777777765544
No 150
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=53.32 E-value=30 Score=33.09 Aligned_cols=56 Identities=21% Similarity=0.295 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceE-EEecCCCCCcc
Q 015317 69 LALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSG-QIYDSSPVDFT 141 (409)
Q Consensus 69 ~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG-~I~DS~P~~~~ 141 (409)
.|.+.++.+.+.. +.+|.+-|+|-||..+.|+...+ . ....++|.. ..+|+ |+-..
T Consensus 70 ~A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~-~------------~~~~~rI~~vy~fDg-PGf~~ 126 (224)
T PF11187_consen 70 SALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANC-D------------DEIQDRISKVYSFDG-PGFSE 126 (224)
T ss_pred HHHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHc-c------------HHHhhheeEEEEeeC-CCCCh
Confidence 4555555555433 34599999999998767765441 1 112346655 45999 66443
No 151
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=52.72 E-value=59 Score=28.29 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=25.8
Q ss_pred CCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCC
Q 015317 85 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 138 (409)
Q Consensus 85 ~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~ 138 (409)
...|++=|+|+||+.+....+.+-... ....+..+.||+++.
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~------------~~~~~~~~~fg~p~~ 68 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRG------------LGRLVRVYTFGPPRV 68 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhcc------------CCCceEEEEeCCCcc
Confidence 346999999999985444433321100 113577888888554
No 152
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=51.80 E-value=76 Score=37.39 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=45.1
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHc--CCcEEEEccccccccCc--hhhhHHHHHHHHHHHHHhcCCCCcEEEEEcc
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSL--GWNSLICHSQFLNMFFP--EKAESLALDVLKELVEELKFGPCPVVFASFS 94 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~l--G~nvLvv~s~~~~~~~p--~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FS 94 (409)
.++++++||+.+... -|..+-..+ ++.++.++.+...-..+ ..-..+|.+++..+..... ..|..+-|+|
T Consensus 1068 ~~~l~~lh~~~g~~~----~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~--~~p~~l~G~S 1141 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW----QFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQP--HGPYHLLGYS 1141 (1296)
T ss_pred CCCeEEecCCCCchH----HHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCC--CCCEEEEEec
Confidence 478999999988543 344444433 57777766654322111 1223456666555443222 3579999999
Q ss_pred CcHHHH
Q 015317 95 GGPKAC 100 (409)
Q Consensus 95 nGG~~~ 100 (409)
+||...
T Consensus 1142 ~Gg~vA 1147 (1296)
T PRK10252 1142 LGGTLA 1147 (1296)
T ss_pred hhhHHH
Confidence 999753
No 153
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=51.33 E-value=77 Score=32.79 Aligned_cols=84 Identities=18% Similarity=0.043 Sum_probs=53.5
Q ss_pred CCcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEcccc-------ccccC-----c----hhhhHHHHHHHHHHHHH--
Q 015317 19 REGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQF-------LNMFF-----P----EKAESLALDVLKELVEE-- 80 (409)
Q Consensus 19 ~kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~-------~~~~~-----p----~~~~~~a~~vL~~L~~~-- 80 (409)
.-|||++-.-+|+....+.--++...+.||-|...+.+- ..+.. | +.-. -...+|++|...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~-dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPL-DISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccc-cHHHHHHHHHHhhc
Confidence 468888888888888878878888999999885543321 11111 1 1111 123456666654
Q ss_pred ---hc--CCCCcEEEEEccCcHHHHHHH
Q 015317 81 ---LK--FGPCPVVFASFSGGPKACMYK 103 (409)
Q Consensus 81 ---~~--~~~~pIl~H~FSnGG~~~l~~ 103 (409)
.. ....+|.+-|||-||.+.|+.
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~l 176 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMEL 176 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHh
Confidence 11 123579999999999877765
No 154
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.09 E-value=22 Score=35.48 Aligned_cols=59 Identities=15% Similarity=0.305 Sum_probs=48.8
Q ss_pred EEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHHHHHHHh
Q 015317 204 YLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTELLGKAG 267 (409)
Q Consensus 204 ~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~~~~ 267 (409)
..++-.+.|..||-..+-++.+.|. |..|+.. + .+||..+-.+-++++++|.+-|++.-
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP--g~eVr~~--e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP--GCEVRYL--E-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC--CCEEEEe--e-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 4557789999999999999988887 4444433 3 89999999999999999999998743
No 155
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=49.24 E-value=54 Score=27.68 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCC
Q 015317 74 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 138 (409)
Q Consensus 74 L~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~ 138 (409)
|+++.+..+ +..|++=|+|.||+.+....+.+.+.. ......++.+.|-+++.
T Consensus 54 l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~----------~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 54 LKELVEKYP--DYSIVITGHSLGGALASLAAADLASHG----------PSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCT----------TTSTTTEEEEEES-S--
T ss_pred HHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcc----------cccccceeeeecCCccc
Confidence 334444443 356999999999985444333333211 00134667777766443
No 156
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.38 E-value=1.8e+02 Score=28.54 Aligned_cols=99 Identities=13% Similarity=0.055 Sum_probs=56.3
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcE--EEEcccccccc-Cchhh-hHHHHHHHHHHHHHhcCCCCcEEEEEccC
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNS--LICHSQFLNMF-FPEKA-ESLALDVLKELVEELKFGPCPVVFASFSG 95 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nv--Lvv~s~~~~~~-~p~~~-~~~a~~vL~~L~~~~~~~~~pIl~H~FSn 95 (409)
+||.++|+=.| +..-|+.+=..++... +-.+++..... .+... .+.+...++.|...-+. .|+.+-|+|.
T Consensus 1 ~pLF~fhp~~G----~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~--GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGG----SVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPE--GPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCC----cHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCC--CCEEEEeecc
Confidence 46777777666 3444555444445543 33344433211 11111 24566677777665443 5799999999
Q ss_pred cHHHHHHHHHHHHhhhhhccccccchhccccCc-eEEEecCCCC
Q 015317 96 GPKACMYKVLQITEGICEAKLSLDDRQLVRDCF-SGQIYDSSPV 138 (409)
Q Consensus 96 GG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~V-kG~I~DS~P~ 138 (409)
||.. .+.+.+.|.+.- ..| .-.++|+.|.
T Consensus 75 GG~v-A~evA~qL~~~G-------------~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAV-AFEVAAQLEAQG-------------EEVAFLGLLDAVPP 104 (257)
T ss_pred ccHH-HHHHHHHHHhCC-------------CeEEEEEEeccCCC
Confidence 9975 455555554321 133 3478899877
No 157
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=47.48 E-value=12 Score=35.45 Aligned_cols=158 Identities=15% Similarity=0.102 Sum_probs=92.3
Q ss_pred CEEEEecCCC-CccChHHHHHHHHHHHhCC--Cc-eEEEEcCCCccchhhccChHHHHHHHHHHHH-------HHhhhhh
Q 015317 203 PYLILCSEDD-DLAPYQVIYNFAQRLCDLG--AD-VKLVKWNSSPHVGHYRHYPIDYKAAVTELLG-------KAGAVYS 271 (409)
Q Consensus 203 P~LyIYS~~D-~lVP~~~Ve~~a~~~r~~G--~~-V~~~~f~dS~HV~H~r~hPeeY~~aV~~Fl~-------~~~~~~~ 271 (409)
|.+++|+=.. -..-+..+.+.++...+.+ .+ +.-.+|+.+|+..++ .....++.+...... .......
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY-SSSARAFSAALPKSSPRWFVPLWPLLQFL 145 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc-ccHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 4677776554 4444555555555443211 23 788899999999998 555666655532220 1111111
Q ss_pred HHHHHHhhhhcCCCCCCCCcCCccccccccccCCCCcccccccCC--CCceeccCCcc-cccCCCCCCchhhhhccc--c
Q 015317 272 QRIQRLEREKMGLEGTHDDMADPMYNLSKAAVSPTRSFRGTSLVP--SDHFVLPSSLE-YYDGRDVGSLQDEHKERL--I 346 (409)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~ 346 (409)
-+...+ ..-+|-..+.....++.++.....| +-+.|+-|..+ ....++++...+|+|+.= +
T Consensus 146 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V 211 (240)
T PF05705_consen 146 LRLSII--------------SYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDV 211 (240)
T ss_pred HHHHHH--------------HHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeE
Confidence 111011 1112333333333444455555555 44888888887 556788899999888733 2
Q ss_pred CCCCCCCCCccccchhhhccccccCCCCCc
Q 015317 347 HLPNPPSINTHGVLGQILFDVCVPKNVEGW 376 (409)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (409)
..-.. .-+||-...+.-.|.|+.+..|.|
T Consensus 212 ~~~~f-~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 212 RAEKF-EDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EEecC-CCCchhhhcccCHHHHHHHHHhhC
Confidence 33233 347999999999999999988887
No 158
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=47.36 E-value=99 Score=30.72 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=43.8
Q ss_pred CCCCCCEEEEecC------CCCccChHHHHHHHHHHHhCCCceEEEEcCC--CccchhhccChHHHHHHHHHHHH
Q 015317 198 VRFGAPYLILCSE------DDDLAPYQVIYNFAQRLCDLGADVKLVKWNS--SPHVGHYRHYPIDYKAAVTELLG 264 (409)
Q Consensus 198 ~~~~~P~LyIYS~------~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~d--S~HV~H~r~hPeeY~~aV~~Fl~ 264 (409)
.+...-.|.|+|+ .|--|||.+.-..+......|-.+....+++ +.|- -+.++|. =-+.|.+||-
T Consensus 213 v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs-~lhen~~-v~~yv~~FLw 285 (288)
T COG4814 213 VSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHS-KLHENPT-VAKYVKNFLW 285 (288)
T ss_pred CCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhh-ccCCChh-HHHHHHHHhh
Confidence 3455788999986 5779999999999999888876666655554 4554 2233333 3345666654
No 159
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=46.64 E-value=1.3e+02 Score=30.04 Aligned_cols=38 Identities=11% Similarity=0.223 Sum_probs=30.4
Q ss_pred CcEEEEecccCC--hHHHHHHHHHHHHHcCCcEEEEcccc
Q 015317 20 EGIVVVFAWMSS--EERQLKRFVQLYSSLGWNSLICHSQF 57 (409)
Q Consensus 20 kplVVl~GW~gA--~~rhl~KYa~lY~~lG~nvLvv~s~~ 57 (409)
-.||||++|... .+..+..-....-+.||.+|.+..+.
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~ 127 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPD 127 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCC
Confidence 468888888764 35788888888999999999877654
No 160
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.54 E-value=1.7e+02 Score=30.90 Aligned_cols=39 Identities=5% Similarity=0.252 Sum_probs=31.4
Q ss_pred CCcEEEEecccC-ChHHHHHHHHHHHHHcCCcEEEEcccc
Q 015317 19 REGIVVVFAWMS-SEERQLKRFVQLYSSLGWNSLICHSQF 57 (409)
Q Consensus 19 ~kplVVl~GW~g-A~~rhl~KYa~lY~~lG~nvLvv~s~~ 57 (409)
.+.||++.|--| .+.....||+-.|++.||.+.+++.+.
T Consensus 100 kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDT 139 (483)
T KOG0780|consen 100 KPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADT 139 (483)
T ss_pred CCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEEeecc
Confidence 466888888877 566789999999999999997665543
No 161
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=43.89 E-value=68 Score=25.37 Aligned_cols=38 Identities=8% Similarity=0.190 Sum_probs=25.1
Q ss_pred CcEEEEecccCChHHHHHHHHHHHHHcCCcEEEEccccc
Q 015317 20 EGIVVVFAWMSSEERQLKRFVQLYSSLGWNSLICHSQFL 58 (409)
Q Consensus 20 kplVVl~GW~gA~~rhl~KYa~lY~~lG~nvLvv~s~~~ 58 (409)
..|+|+||...... .....++...+.||.|..++.+..
T Consensus 17 ~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGh 54 (79)
T PF12146_consen 17 AVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGH 54 (79)
T ss_pred EEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcC
Confidence 34555555544333 356667778889999999887653
No 162
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=42.37 E-value=1.7e+02 Score=29.93 Aligned_cols=92 Identities=10% Similarity=0.161 Sum_probs=57.8
Q ss_pred CcEEEEecccC-ChHHHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcH-
Q 015317 20 EGIVVVFAWMS-SEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGP- 97 (409)
Q Consensus 20 kplVVl~GW~g-A~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG- 97 (409)
+-||+++|=.| .+-..+.|.+..|.+.|+.|++.-.+.. + .. .+++|....+..+.+++-|- -|+
T Consensus 139 p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTF------R--Aa---AiEQL~~w~er~gv~vI~~~--~G~D 205 (340)
T COG0552 139 PFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTF------R--AA---AIEQLEVWGERLGVPVISGK--EGAD 205 (340)
T ss_pred cEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecchH------H--HH---HHHHHHHHHHHhCCeEEccC--CCCC
Confidence 55677777777 6778899999999999999999877653 1 11 23344433333456777774 344
Q ss_pred -HHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCc
Q 015317 98 -KACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDF 140 (409)
Q Consensus 98 -~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~ 140 (409)
++..|...|...+ ..+.-+|.|-+ |+.
T Consensus 206 pAaVafDAi~~Aka---------------r~~DvvliDTA-GRL 233 (340)
T COG0552 206 PAAVAFDAIQAAKA---------------RGIDVVLIDTA-GRL 233 (340)
T ss_pred cHHHHHHHHHHHHH---------------cCCCEEEEeCc-ccc
Confidence 4445554443222 25667777775 444
No 163
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=42.30 E-value=68 Score=33.19 Aligned_cols=63 Identities=22% Similarity=0.208 Sum_probs=47.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEc-CCCccchhhccChHHHHHHHHHHHHH
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKW-NSSPHVGHYRHYPIDYKAAVTELLGK 265 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f-~dS~HV~H~r~hPeeY~~aV~~Fl~~ 265 (409)
..++|.|.+-...|.+.|++...+.++..+..|. .+.+ ..-+|=+++. +.+.|-..|.+||+.
T Consensus 304 ~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i~S~~GHDaFL~-e~~~~~~~i~~fL~~ 367 (368)
T COG2021 304 RIKAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREIDSPYGHDAFLV-ESEAVGPLIRKFLAL 367 (368)
T ss_pred cCccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEecCCCCchhhhc-chhhhhHHHHHHhhc
Confidence 3678999999999999999999999999887653 3333 2234444443 456688999999874
No 164
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=41.78 E-value=56 Score=34.25 Aligned_cols=31 Identities=19% Similarity=0.100 Sum_probs=19.9
Q ss_pred HHHHHHHHH---hcCCCCcEEEEEccCcHHHHHH
Q 015317 72 DVLKELVEE---LKFGPCPVVFASFSGGPKACMY 102 (409)
Q Consensus 72 ~vL~~L~~~---~~~~~~pIl~H~FSnGG~~~l~ 102 (409)
.+|+|+.+. ....+..|.+.|+|-||...+.
T Consensus 159 ~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~ 192 (493)
T cd00312 159 LALKWVQDNIAAFGGDPDSVTIFGESAGGASVSL 192 (493)
T ss_pred HHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhh
Confidence 345555443 3334567999999999965333
No 165
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=40.93 E-value=37 Score=32.33 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=20.6
Q ss_pred HHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhh
Q 015317 75 KELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGI 111 (409)
Q Consensus 75 ~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~ 111 (409)
+..++..+ .++|+|+-|+|=|+.+ +.+||++.
T Consensus 85 ~~yL~~~n-~GRPfILaGHSQGs~~----l~~LL~e~ 116 (207)
T PF11288_consen 85 DYYLANYN-NGRPFILAGHSQGSMH----LLRLLKEE 116 (207)
T ss_pred HHHHHhcC-CCCCEEEEEeChHHHH----HHHHHHHH
Confidence 33344333 4689999999999965 34455543
No 166
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=37.90 E-value=65 Score=35.22 Aligned_cols=81 Identities=9% Similarity=-0.041 Sum_probs=55.5
Q ss_pred HHHHcCCcEEEEccccc-------cccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHHhhhhhc
Q 015317 42 LYSSLGWNSLICHSQFL-------NMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQITEGICEA 114 (409)
Q Consensus 42 lY~~lG~nvLvv~s~~~-------~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll~~~~~~ 114 (409)
.|...||-|+..+.+.. ..++. .....+.++|+||.+ .+-.+..+..-|+|-+|.++++.+.+ .
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~-QpWsNG~Vgm~G~SY~g~tq~~~Aa~-------~ 145 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAK-QPWSNGNVGMLGLSYLGFTQLAAAAL-------Q 145 (563)
T ss_pred eeecCceEEEEecccccccCCcccceecc-ccccchhHHHHHHHh-CCccCCeeeeecccHHHHHHHHHHhc-------C
Confidence 58888999988766432 12223 223566789999987 44455679999999999876665322 1
Q ss_pred cccccchhccccCceEEEecCCCCCcc
Q 015317 115 KLSLDDRQLVRDCFSGQIYDSSPVDFT 141 (409)
Q Consensus 115 ~l~~~~~~~l~~~VkG~I~DS~P~~~~ 141 (409)
.+.+|++|-.++..+..
T Consensus 146 ----------pPaLkai~p~~~~~D~y 162 (563)
T COG2936 146 ----------PPALKAIAPTEGLVDRY 162 (563)
T ss_pred ----------Cchheeecccccccccc
Confidence 24788999888877753
No 167
>cd03465 URO-D_like The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases. Uroporphyrinogen decarboxylase (URO-D) decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, an important branching point of the tetrapyrrole biosynthetic pathway. The methyltransferases represented here are important for ability of methanogenic organisms to use other compounds than carbon dioxide for reduction to methane.
Probab=35.81 E-value=1.1e+02 Score=30.09 Aligned_cols=63 Identities=16% Similarity=0.289 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCCcEEEEcccccc--ccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcH
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFLN--MFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGP 97 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~~--~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG 97 (409)
.+.+|++.+.+.|.+.+.+.-+..+ ++.|+...+.+.+.++++++..+..+.++++|.=.+..
T Consensus 169 ~~~~~~~~~~~~G~d~i~i~d~~~~~~~isp~~f~e~~~p~~k~i~~~i~~~g~~~~lH~cG~~~ 233 (330)
T cd03465 169 FIIRYADALIEAGADGIYISDPWASSSILSPEDFKEFSLPYLKKVFDAIKALGGPVIHHNCGDTA 233 (330)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccCCCCHHHHHHHhhHHHHHHHHHHHHcCCceEEEECCCch
Confidence 3567888888889998776554432 34566556667777777777766556679999875543
No 168
>cd00465 URO-D_CIMS_like The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases. Despite their sequence similarities, members of this family have clearly different functions. Uroporphyrinogen decarboxylase (URO-D) decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, an important branching point of the tetrapyrrole biosynthetic pathway. The methyltransferases represented here are important for ability of methanogenic organisms to use other compounds than carbon dioxide for reduction to methane, and methionine synthases transfer a methyl group from a folate cofactor to L-homocysteine in a reaction requiring zinc.
Probab=35.52 E-value=1.4e+02 Score=29.17 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccccc----cCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEc
Q 015317 34 RQLKRFVQLYSSLGWNSLICHSQFLNM----FFPEKAESLALDVLKELVEELKFGPCPVVFASF 93 (409)
Q Consensus 34 rhl~KYa~lY~~lG~nvLvv~s~~~~~----~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~F 93 (409)
..+..|++...+.|.+++.+.-+.... ..|+...+.+.+.++.+.+.....+.++++|.=
T Consensus 144 ~~~~~~~~~~~eaG~d~i~i~dp~~~~~~~~is~~~~~e~~~p~~k~i~~~i~~~~~~~~lH~c 207 (306)
T cd00465 144 EFILEYAKTLIEAGAKALQIHEPAFSQINSFLGPKMFKKFALPAYKKVAEYKAAGEVPIVHHSC 207 (306)
T ss_pred HHHHHHHHHHHHhCCCEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCceEEEEC
Confidence 446778888888999988776544332 345544556667777777655444556777754
No 169
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=35.40 E-value=1.5e+02 Score=25.16 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=22.6
Q ss_pred HHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHH
Q 015317 74 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQ 106 (409)
Q Consensus 74 L~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~q 106 (409)
+..+.+.....+.||++|.-|+.=+..|+.+.+
T Consensus 75 v~~f~~~l~~~~~Pvl~hC~sG~Ra~~l~~l~~ 107 (110)
T PF04273_consen 75 VEAFADALESLPKPVLAHCRSGTRASALWALAQ 107 (110)
T ss_dssp HHHHHHHHHTTTTSEEEE-SCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCCChhHHHHHHHHh
Confidence 334444444456799999999988877887665
No 170
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=35.09 E-value=1.1e+02 Score=28.50 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=26.1
Q ss_pred CCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCC
Q 015317 85 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 138 (409)
Q Consensus 85 ~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~ 138 (409)
+.+|+|=|.|+||+.+....+.+.... ....+.++.|-|++.
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~------------~~~~i~~~tFg~P~v 168 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG------------PGSDVTVYTFGQPRV 168 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC------------CCCceEEEEeCCCCC
Confidence 356999999999985444433332210 123578888887544
No 171
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=34.49 E-value=47 Score=36.04 Aligned_cols=53 Identities=19% Similarity=0.330 Sum_probs=37.2
Q ss_pred CCCCCCEEEEecCCCCccChHHHHH-------HHHHHHhCCCceEEEEcCCCccchhhcc
Q 015317 198 VRFGAPYLILCSEDDDLAPYQVIYN-------FAQRLCDLGADVKLVKWNSSPHVGHYRH 250 (409)
Q Consensus 198 ~~~~~P~LyIYS~~D~lVP~~~Ve~-------~a~~~r~~G~~V~~~~f~dS~HV~H~r~ 250 (409)
.++++|..+++|..|.++|++.+-. =.++.+..|..+-...=+.-+|-|.+..
T Consensus 294 r~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS 353 (581)
T PF11339_consen 294 RNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVS 353 (581)
T ss_pred hhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEec
Confidence 4678999999999999999998733 2344455565544455555667666654
No 172
>PF01208 URO-D: Uroporphyrinogen decarboxylase (URO-D); InterPro: IPR000257 Uroporphyrinogen decarboxylase (URO-D), the fifth enzyme of the haem biosynthetic pathway, catalyses the sequential decarboxylation of the four acetyl side chains of uroporphyrinogen to yield coproporphyrinogen []. URO-D deficiency is responsible for the human genetic diseases familial porphyria cutanea tarda (fPCT) and hepatoerythropoietic porphyria (HEP). The sequence of URO-D has been well conserved throughout evolution. The best conserved region is located in the N-terminal section; it contains a perfectly conserved hexapeptide. There are two arginine residues in this hexapeptide which could be involved in the binding, via salt bridges, to the carboxyl groups of the propionate side chains of the substrate. The crystal structure of human uroporphyrinogen decarboxylase shows it as comprised of a single domain containing a (beta/alpha)8-barrel with a deep active site cleft formed by loops at the C-terminal ends of the barrel strands. URO-D is a dimer in solution. Dimerisation juxtaposes the active site clefts of the monomers, suggesting a functionally important interaction between the catalytic centres [].; GO: 0004853 uroporphyrinogen decarboxylase activity, 0006779 porphyrin-containing compound biosynthetic process; PDB: 4EXQ_A 2INF_C 1J93_A 3GW0_A 1R3Q_A 1JPH_A 1JPI_A 3GVR_A 3GVW_A 3GVV_A ....
Probab=34.25 E-value=70 Score=31.86 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCC-cEEEEEccCc
Q 015317 34 RQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPC-PVVFASFSGG 96 (409)
Q Consensus 34 rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~-pIl~H~FSnG 96 (409)
..+.+|++.+.+.|.+++.+.-....++.|+.......+.++++++..+.... ++++|.=-+.
T Consensus 182 ~~~~~~~~~~~~~G~d~i~~~d~~~~~isp~~f~e~~~P~~k~i~~~i~~~g~~~~~lH~cG~~ 245 (343)
T PF01208_consen 182 DFIIEYAKAQIEAGADGIFIFDSSGSLISPEMFEEFILPYLKKIIDAIKEAGKDPVILHICGNT 245 (343)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEETTGGGS-HHHHHHHTHHHHHHHHHHHHHHETE-EEEEETTHG
T ss_pred HHHHHHHHHHHHhCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEECCch
Confidence 35678899999999998754445556778877666666777777777665445 7999976443
No 173
>PLN02324 triacylglycerol lipase
Probab=34.14 E-value=61 Score=34.10 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=23.7
Q ss_pred HHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHH
Q 015317 74 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQIT 108 (409)
Q Consensus 74 L~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll 108 (409)
|..|++..+.....|+|=|.|.||+.++....++.
T Consensus 203 V~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~ 237 (415)
T PLN02324 203 LKRLLELYKNEEISITFTGHSLGAVMSVLSAADLV 237 (415)
T ss_pred HHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHH
Confidence 44555555544456999999999986555555554
No 174
>TIGR01463 mtaA_cmuA methyltransferase, MtaA/CmuA family. This subfamily is closely related to, yet is distinct from, uroporphyrinogen decarboxylase (EC 4.1.1.37). It includes two isozymes from Methanosarcina barkeri of methylcobalamin--coenzyme M methyltransferase. It also includes a chloromethane utilization protein, CmuA, which transfers the methyl group of chloromethane to a corrinoid protein.
Probab=33.76 E-value=1.4e+02 Score=29.79 Aligned_cols=62 Identities=15% Similarity=0.107 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHcCCcEEEEccccc--cccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCc
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFL--NMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGG 96 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~--~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnG 96 (409)
.+..|++.+.+.|.+++.+.-+.. .++.|+...+.+.+.++++++..+..+.+.++|.=.+.
T Consensus 181 ~~~~~~~~~~~~Gad~I~i~dp~a~~~~lsp~~f~e~~~p~~k~i~~~i~~~g~~~ilH~CG~~ 244 (340)
T TIGR01463 181 FVIAYAKAMVEAGADVIAIADPFASSDLISPETYKEFGLPYQKRLFAYIKEIGGITVLHICGFT 244 (340)
T ss_pred HHHHHHHHHHHcCCCEEEecCCccCccccCHHHHHHHHHHHHHHHHHHHHhcCCceEEEECCCc
Confidence 467888888899999876654443 26667655566666677777665544456677866443
No 175
>PF09497 Med12: Transcription mediator complex subunit Med12; InterPro: IPR019035 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med12 is a component of the evolutionarily conserved Mediator complex []. The Med12 subunit may specifically regulate transcription of targets of the Wnt signaling pathway and SHH signaling pathway. Med12 is a negative regulator of the Gli3-dependent sonic hedgehog signaling pathway via its interaction with Gli3 within the Mediator. A complex is formed between Med12, Med13, CDK8 and CycC which is responsible for suppression of transcription []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=33.72 E-value=14 Score=28.66 Aligned_cols=20 Identities=25% Similarity=0.311 Sum_probs=18.3
Q ss_pred CccccchhhhccccccCCCC
Q 015317 355 NTHGVLGQILFDVCVPKNVE 374 (409)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~ 374 (409)
=|||.=|+.|||.|.-+||.
T Consensus 36 iPhg~k~~~ll~~l~~~~VP 55 (64)
T PF09497_consen 36 IPHGIKKEELLEQLCEYNVP 55 (64)
T ss_pred CCCcccHHHHHHHHHHcCCC
Confidence 48999999999999999985
No 176
>PLN02606 palmitoyl-protein thioesterase
Probab=33.02 E-value=4.8e+02 Score=26.44 Aligned_cols=84 Identities=12% Similarity=0.114 Sum_probs=43.8
Q ss_pred CCCcEEEEeccc--CChHHHHHHHHHHHHHc-CCcEEE--Ecccc-ccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEE
Q 015317 18 RREGIVVVFAWM--SSEERQLKRFVQLYSSL-GWNSLI--CHSQF-LNMFFPEKAESLALDVLKELVEELKFGPCPVVFA 91 (409)
Q Consensus 18 ~~kplVVl~GW~--gA~~rhl~KYa~lY~~l-G~nvLv--v~s~~-~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H 91 (409)
++.||||.||-. .+++ -+.+.+++-.+. |..+.. +..+. .++|.+-.. + +..+-+.|.+ .+.-+.-+-+-
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~-Q-v~~vce~l~~-~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQ-Q-ASIACEKIKQ-MKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHH-H-HHHHHHHHhc-chhhcCceEEE
Confidence 368999999987 3443 466666665533 654432 33232 234444321 1 1122222332 12122347778
Q ss_pred EccCcHHHHHHHHHH
Q 015317 92 SFSGGPKACMYKVLQ 106 (409)
Q Consensus 92 ~FSnGG~~~l~~l~q 106 (409)
|||=||- ++.+++|
T Consensus 101 GfSQGgl-flRa~ie 114 (306)
T PLN02606 101 AESQGNL-VARGLIE 114 (306)
T ss_pred EEcchhH-HHHHHHH
Confidence 9999995 3555555
No 177
>PLN02454 triacylglycerol lipase
Probab=32.79 E-value=90 Score=32.86 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=22.6
Q ss_pred HHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHH
Q 015317 74 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQIT 108 (409)
Q Consensus 74 L~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll 108 (409)
|+.+++..+..+..|++=|.|+||+.++....++.
T Consensus 216 V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~ 250 (414)
T PLN02454 216 IKELLERYKDEKLSIVLTGHSLGASLATLAAFDIV 250 (414)
T ss_pred HHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHH
Confidence 34455544433345999999999986555555543
No 178
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.94 E-value=1.2e+02 Score=33.61 Aligned_cols=50 Identities=20% Similarity=0.109 Sum_probs=33.0
Q ss_pred CCcEEEEEccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCCCc
Q 015317 85 PCPVVFASFSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPVDF 140 (409)
Q Consensus 85 ~~pIl~H~FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~ 140 (409)
++||+.-+.||||...=..+++.+.+. ..+-+.+..+.+|+||=|.|-..
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~------kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSS------KPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcC------CchhhhhhccCCceEEEecCCCC
Confidence 689999999999942111133433221 22335677789999999999554
No 179
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=29.97 E-value=1.2e+02 Score=31.85 Aligned_cols=47 Identities=15% Similarity=0.088 Sum_probs=34.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccch
Q 015317 199 RFGAPYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVG 246 (409)
Q Consensus 199 ~~~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~ 246 (409)
+..+|..+.||++|-++..+||+.+......... +..+.+++=.|..
T Consensus 330 ~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlD 376 (403)
T KOG2624|consen 330 NIKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLD 376 (403)
T ss_pred ccccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCcccee
Confidence 3578999999999999999999999988765533 2333344444443
No 180
>TIGR01464 hemE uroporphyrinogen decarboxylase. This model represents uroporphyrinogen decarboxylase (HemE), which converts uroporphyrinogen III to coproporphyrinogen III. This step takes the pathway toward protoporphyrin IX, a common precursor of both heme and chlorophyll, rather than toward precorrin 2 and its products.
Probab=29.32 E-value=3.2e+02 Score=27.31 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcC
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKF 83 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~ 83 (409)
.+.+|++.+.+.|.+++.+.-+...++.|+...+.+.+.++++++..+.
T Consensus 181 ~~~~~~~~~~eaGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~ 229 (338)
T TIGR01464 181 ATIEYLVEQVKAGAQAVQIFDSWAGALSPEDFEEFVLPYLKKIIEEVKA 229 (338)
T ss_pred HHHHHHHHHHHcCCCEEEEECCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4668888888899998764433456677776666666666666665543
No 181
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=28.00 E-value=2.1e+02 Score=30.30 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCcE-EEEccccccccCchhhhHHHHHHHHHHHHHh-c-CCCCcEEEEEccCcHHHHHHHHHHHHh
Q 015317 33 ERQLKRFVQLYSSLGWNS-LICHSQFLNMFFPEKAESLALDVLKELVEEL-K-FGPCPVVFASFSGGPKACMYKVLQITE 109 (409)
Q Consensus 33 ~rhl~KYa~lY~~lG~nv-Lvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~-~-~~~~pIl~H~FSnGG~~~l~~l~qll~ 109 (409)
.....+.++...+.||.. .-...-..++-.+....... +.++.++++. . ....+++|.|.||||..+++-+ +..
T Consensus 107 ~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~-~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl-~~~- 183 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETM-DGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFM-SLH- 183 (440)
T ss_pred HHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHH-HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHH-HHC-
Confidence 355677778888899865 11111001111111111111 1222333322 1 2245799999999997644422 210
Q ss_pred hhhhccccccchhccccCceEEEecCCCCCc
Q 015317 110 GICEAKLSLDDRQLVRDCFSGQIYDSSPVDF 140 (409)
Q Consensus 110 ~~~~~~l~~~~~~~l~~~VkG~I~DS~P~~~ 140 (409)
.+ .....|+.+|.=++|-..
T Consensus 184 --------p~---~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 184 --------SD---VFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred --------CH---hHHhHhccEEEECCCCCC
Confidence 11 122457777777877443
No 182
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=27.74 E-value=2.7e+02 Score=25.18 Aligned_cols=64 Identities=13% Similarity=0.037 Sum_probs=43.5
Q ss_pred CCcEEEEecccC--ChHHHHHHHHHHHHHcCCcEEE-Ecccccc-ccCchhhhHHHHHHHHHHHHHhc
Q 015317 19 REGIVVVFAWMS--SEERQLKRFVQLYSSLGWNSLI-CHSQFLN-MFFPEKAESLALDVLKELVEELK 82 (409)
Q Consensus 19 ~kplVVl~GW~g--A~~rhl~KYa~lY~~lG~nvLv-v~s~~~~-~~~p~~~~~~a~~vL~~L~~~~~ 82 (409)
.+|+.|++|-.+ ....+..++.+..++.|-++.+ +-+.-.| +..++.....-..+++++.+.++
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 589999999887 3558889999999999998844 3333334 33344444445566777766554
No 183
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=27.58 E-value=2.2e+02 Score=28.81 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=24.7
Q ss_pred EEEecccCChHHHHHHHHHHHHHcC--CcEEEEcc
Q 015317 23 VVVFAWMSSEERQLKRFVQLYSSLG--WNSLICHS 55 (409)
Q Consensus 23 VVl~GW~gA~~rhl~KYa~lY~~lG--~nvLvv~s 55 (409)
|++.|. |++.+-|.+|++.|..-. +.++++..
T Consensus 57 lL~YG~-GSKr~lL~~Fa~~~l~~~~~~~~vvvnG 90 (326)
T PF04084_consen 57 LLFYGY-GSKRKLLNDFAEKYLSDWGDGPVVVVNG 90 (326)
T ss_pred EEEEec-ChHHHHHHHHHHHHhhccCCCcEEEEEc
Confidence 566676 789999999999988874 56666543
No 184
>PRK06252 methylcobalamin:coenzyme M methyltransferase; Validated
Probab=27.37 E-value=2.1e+02 Score=28.51 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHcCCcEEEEcccccc--ccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEc
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFLN--MFFPEKAESLALDVLKELVEELKFGPCPVVFASF 93 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~~--~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~F 93 (409)
.+.+|++.+.+.|.+++.+.-+..+ ++.|+.....+.+.++.+++..+.. +.++|.-
T Consensus 181 ~~~~~~~~~~~aGad~I~i~d~~a~~~~lsp~~f~ef~~p~~~~i~~~i~~~--~~ilH~c 239 (339)
T PRK06252 181 FCIEYAKAQLEAGADVICIADPSASPELLGPKMFEEFVLPYLNKIIDEVKGL--PTILHIC 239 (339)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCccccccCHHHHHHHHHHHHHHHHHHhccC--CcEEEEC
Confidence 4577888888999999876555443 6777766667777777788776543 5677754
No 185
>PRK00115 hemE uroporphyrinogen decarboxylase; Validated
Probab=26.71 E-value=3.8e+02 Score=26.93 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcC
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKF 83 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~ 83 (409)
.+..|++.+.+.|-+++.+--+..+++.|+.....+.+.+++|++..+.
T Consensus 187 ~~~~~~~~~~eaGad~i~i~d~~~~~lsp~~f~ef~~P~~k~i~~~i~~ 235 (346)
T PRK00115 187 ATIAYLNAQIEAGAQAVQIFDSWAGALSPADYREFVLPYMKRIVAELKR 235 (346)
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3577888888899998765444556777776666666666667666543
No 186
>PLN02408 phospholipase A1
Probab=26.53 E-value=2.2e+02 Score=29.56 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=22.0
Q ss_pred HHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHH
Q 015317 74 LKELVEELKFGPCPVVFASFSGGPKACMYKVLQI 107 (409)
Q Consensus 74 L~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~ql 107 (409)
|+.+++..+..+..|++=|.|.||+.+.....++
T Consensus 188 I~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 188 IARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3444555544445699999999998655554454
No 187
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=26.03 E-value=1.9e+02 Score=26.78 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=47.2
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCc--cchhh-------ccChHHHHHHHHHHHHHHhhhhhHH
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSP--HVGHY-------RHYPIDYKAAVTELLGKAGAVYSQR 273 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~--HV~H~-------r~hPeeY~~aV~~Fl~~~~~~~~~~ 273 (409)
..|++||..|--. -+..+.++..+++.|.+|+.+--.--. --+++ -.+-..|-+++.+|+++....-..|
T Consensus 2 k~LIlYstr~GqT-~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~~e~L~~k 80 (175)
T COG4635 2 KTLILYSTRDGQT-RKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKHAEALSTK 80 (175)
T ss_pred ceEEEEecCCCcH-HHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHHHHHHhcC
Confidence 4699999999865 356777888889999888776432111 11111 1133456788999999877776666
Q ss_pred H
Q 015317 274 I 274 (409)
Q Consensus 274 ~ 274 (409)
+
T Consensus 81 P 81 (175)
T COG4635 81 P 81 (175)
T ss_pred C
Confidence 4
No 188
>cd00717 URO-D Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction is located at the branching point of the tetrapyrrole biosynthetic pathway, leading to the biosynthesis of heme, chlorophyll or bacteriochlorophyll. URO-D deficiency is responsible for the human genetic diseases familial porphyria cutanea tarda (fPCT) and hepatoerythropoietic porphyria (HEP).
Probab=25.47 E-value=1.9e+02 Score=28.77 Aligned_cols=49 Identities=20% Similarity=0.307 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcC
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKF 83 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~ 83 (409)
.+..|++.+.+.|.+++.+.-+..+++.|+...+.+.+.++++++..+.
T Consensus 178 ~~~~~~~~~ieaGad~i~i~d~~~~~lsp~~f~ef~~P~~k~i~~~i~~ 226 (335)
T cd00717 178 ATIEYLKAQIEAGAQAVQIFDSWAGALSPEDFEEFVLPYLKRIIEEVKK 226 (335)
T ss_pred HHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888899998765444556777776666666666667666554
No 189
>PLN02433 uroporphyrinogen decarboxylase
Probab=25.41 E-value=2.1e+02 Score=28.89 Aligned_cols=58 Identities=16% Similarity=0.278 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCC--CCcEEEEE
Q 015317 35 QLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFG--PCPVVFAS 92 (409)
Q Consensus 35 hl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~--~~pIl~H~ 92 (409)
.+..|++.+.+.|-+++.+.-+...++.|+...+.+.+.++++++..+.. ..++++|.
T Consensus 180 ~~~~~~~~~ieaGa~~i~i~d~~~~~lsp~~f~ef~~P~~k~i~~~i~~~~~~~~~ilh~ 239 (345)
T PLN02433 180 AVIEYVDYQIDAGAQVVQIFDSWAGHLSPVDFEEFSKPYLEKIVDEVKARHPDVPLILYA 239 (345)
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 35678888888999987544345567777766666666666666665432 34677775
No 190
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=25.28 E-value=1.2e+02 Score=32.43 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=50.9
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHhC-CC-------ceEEEEcCCCccchhhc-cChHHHHHHHHHHHHH
Q 015317 201 GAPYLILCSEDDDLAPYQVIYNFAQRLCDL-GA-------DVKLVKWNSSPHVGHYR-HYPIDYKAAVTELLGK 265 (409)
Q Consensus 201 ~~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~-G~-------~V~~~~f~dS~HV~H~r-~hPeeY~~aV~~Fl~~ 265 (409)
.-..|..||-+|.+||+....+++++..+. |. -+++...++-.||+--- ..+-.=..++.+++|+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 447889999999999999999999987554 42 26777899999998766 4455566777777775
No 191
>PLN02571 triacylglycerol lipase
Probab=25.11 E-value=1.5e+02 Score=31.30 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=21.3
Q ss_pred HHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHH
Q 015317 75 KELVEELKFGPCPVVFASFSGGPKACMYKVLQI 107 (409)
Q Consensus 75 ~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~ql 107 (409)
+.|++..+....+|++=|.|+||+.++....++
T Consensus 215 ~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 215 GRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 334444443334699999999998655554554
No 192
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=23.67 E-value=5.5e+02 Score=25.78 Aligned_cols=100 Identities=16% Similarity=0.082 Sum_probs=52.3
Q ss_pred CCcEEEEecccCC-hHHHHHHHHHHHHHcCCcEEEEccc---c--ccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEE
Q 015317 19 REGIVVVFAWMSS-EERQLKRFVQLYSSLGWNSLICHSQ---F--LNMFFPEKAESLALDVLKELVEELKFGPCPVVFAS 92 (409)
Q Consensus 19 ~kplVVl~GW~gA-~~rhl~KYa~lY~~lG~nvLvv~s~---~--~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~ 92 (409)
..|+||+||-.++ ..--+...+++..+ -+.+.++.-+ . ..++.|-.. -+ ++..+.++..+.-+.-+.+-|
T Consensus 23 ~~P~ii~HGigd~c~~~~~~~~~q~l~~-~~g~~v~~leig~g~~~s~l~pl~~--Qv-~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 23 PVPVIVWHGIGDSCSSLSMANLTQLLEE-LPGSPVYCLEIGDGIKDSSLMPLWE--QV-DVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred cCCEEEEeccCcccccchHHHHHHHHHh-CCCCeeEEEEecCCcchhhhccHHH--HH-HHHHHHHhcchhccCceEEEE
Confidence 4899999998773 21235566666666 3333322221 1 234444332 11 122222322233345599999
Q ss_pred ccCcHHHHHHHHHHHHhhhhhccccccchhccccCceEEEecCCCC
Q 015317 93 FSGGPKACMYKVLQITEGICEAKLSLDDRQLVRDCFSGQIYDSSPV 138 (409)
Q Consensus 93 FSnGG~~~l~~l~qll~~~~~~~l~~~~~~~l~~~VkG~I~DS~P~ 138 (409)
+|-||-. +.+++|. |.. .+|+-+|-=++|-
T Consensus 99 ~SQGglv-~Raliq~----cd~-----------ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 99 YSQGGLV-ARALIQF----CDN-----------PPVKNFISLGGPH 128 (296)
T ss_pred EccccHH-HHHHHHh----CCC-----------CCcceeEeccCCc
Confidence 9999953 4555553 322 3566666555553
No 193
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=23.30 E-value=5.1e+02 Score=24.79 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCc
Q 015317 34 RQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGG 96 (409)
Q Consensus 34 rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnG 96 (409)
.++.+..++-+.+|.+.+++.+........+.......+.++++.+.....+..|.++...+.
T Consensus 85 ~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~gi~l~lEn~~~~ 147 (279)
T cd00019 85 ERLKDEIERCEELGIRLLVFHPGSYLGQSKEEGLKRVIEALNELIDKAETKGVVIALETMAGQ 147 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCC
Confidence 457788888999999988776543211112222244456677777766556667888766544
No 194
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.28 E-value=6.8e+02 Score=25.01 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=31.1
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHhCCCceEEEEcCCCccchhhccChHHHHHHHHH
Q 015317 202 APYLILCSEDDDLAPYQVIYNFAQRLCDLGADVKLVKWNSSPHVGHYRHYPIDYKAAVTE 261 (409)
Q Consensus 202 ~P~LyIYS~~D~lVP~~~Ve~~a~~~r~~G~~V~~~~f~dS~HV~H~r~hPeeY~~aV~~ 261 (409)
.-.-|.||.+|.-||.+.-+.+-+...+. ++++-. ++-+|+=-. +|-+.-..+|.+
T Consensus 243 d~l~Fyygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~-~~~q~ma~~v~d 298 (301)
T KOG3975|consen 243 DSLWFYYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVV-KHAQYMANAVFD 298 (301)
T ss_pred cEEEEEccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceee-cccHHHHHHHHH
Confidence 46779999999999954444333333222 344434 777886332 333333344443
No 195
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=22.53 E-value=6.1e+02 Score=23.81 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=49.4
Q ss_pred cEEEEe-cccC--ChHHHHHHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcH
Q 015317 21 GIVVVF-AWMS--SEERQLKRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGP 97 (409)
Q Consensus 21 plVVl~-GW~g--A~~rhl~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG 97 (409)
.+.+-+ .... .++..+.++++...+.|.+.+.+. +......|+.. .++++.+.+..+. .+|.+|+..+=|
T Consensus 130 ~v~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~i~l~-Dt~G~~~P~~v----~~li~~l~~~~~~--~~~~~H~Hn~~g 202 (265)
T cd03174 130 EVEGSLEDAFGCKTDPEYVLEVAKALEEAGADEISLK-DTVGLATPEEV----AELVKALREALPD--VPLGLHTHNTLG 202 (265)
T ss_pred eEEEEEEeecCCCCCHHHHHHHHHHHHHcCCCEEEec-hhcCCcCHHHH----HHHHHHHHHhCCC--CeEEEEeCCCCC
Confidence 344443 5556 788889999999999998877643 22334566542 3445566655443 679999999988
Q ss_pred HHHHH
Q 015317 98 KACMY 102 (409)
Q Consensus 98 ~~~l~ 102 (409)
.+..+
T Consensus 203 la~an 207 (265)
T cd03174 203 LAVAN 207 (265)
T ss_pred hHHHH
Confidence 65333
No 196
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=21.86 E-value=89 Score=27.13 Aligned_cols=53 Identities=23% Similarity=0.278 Sum_probs=38.5
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHhC-CCceEEEEcCCCccchhhccChHHHHHHH
Q 015317 203 PYLILCSEDDDLAPYQVIYNFAQRLCDL-GADVKLVKWNSSPHVGHYRHYPIDYKAAV 259 (409)
Q Consensus 203 P~LyIYS~~D~lVP~~~Ve~~a~~~r~~-G~~V~~~~f~dS~HV~H~r~hPeeY~~aV 259 (409)
+.+++||. |.--..+-|.++++.+++. |++|..-.|+... + -..++.++...-
T Consensus 2 kVfI~Ys~-d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~~~-i--~~~g~~~W~~~~ 55 (150)
T PF08357_consen 2 KVFISYSH-DSEEHKEWVLALAEFLRQNCGIDVILDQWELNE-I--ARQGPPRWMERQ 55 (150)
T ss_pred eEEEEeCC-CCHHHHHHHHHHHHHHHhccCCceeecHHhhcc-c--ccCCHHHHHHHH
Confidence 57889999 6666678899999999999 9999988776421 0 134666665544
No 197
>cd03307 Mta_CmuA_like MtaA_CmuA_like family. MtaA/CmuA, also MtsA, or methyltransferase 2 (MT2) MT2-A and MT2-M isozymes, are methylcobamide:Coenzyme M methyltransferases, which play a role in metabolic pathways of methane formation from various substrates, such as methylated amines and methanol. Coenzyme M, 2-mercaptoethylsulfonate or CoM, is methylated during methanogenesis in a reaction catalyzed by three proteins. A methyltransferase methylates the corrinoid cofactor, which is bound to a second polypeptide, a corrinoid protein. The methylated corrinoid protein then serves as a substrate for MT2-A and related enzymes, which methylate CoM.
Probab=21.76 E-value=3e+02 Score=27.34 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccc--cccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEE
Q 015317 36 LKRFVQLYSSLGWNSLICHSQFL--NMFFPEKAESLALDVLKELVEELKFGPCPVVFAS 92 (409)
Q Consensus 36 l~KYa~lY~~lG~nvLvv~s~~~--~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~ 92 (409)
+.+|++.+.+.|.+++.+.-+.. .++.|+.....+.+.++++++..+. .++++|.
T Consensus 173 ~~~~~~~~~eaGad~i~i~d~~a~~~~isp~~f~e~~~p~~k~i~~~i~~--~~~ilh~ 229 (326)
T cd03307 173 CIEYAKAQLEAGADIITIADPTASPELISPEFYEEFALPYHKKIVKELHG--CPTILHI 229 (326)
T ss_pred HHHHHHHHHHcCCCEEEecCCCccccccCHHHHHHHHHHHHHHHHHHHhc--CCcEEEE
Confidence 45788888889999876544432 3457776666777777777777654 5688884
No 198
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.17 E-value=3.1e+02 Score=29.20 Aligned_cols=39 Identities=5% Similarity=0.160 Sum_probs=32.3
Q ss_pred CCcEEEEecccC-ChHHHHHHHHHHHHHcCCcEEEEcccc
Q 015317 19 REGIVVVFAWMS-SEERQLKRFVQLYSSLGWNSLICHSQF 57 (409)
Q Consensus 19 ~kplVVl~GW~g-A~~rhl~KYa~lY~~lG~nvLvv~s~~ 57 (409)
+|.+|++.|--| .+-....|.+..|.+.|+.++++..+.
T Consensus 99 ~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~ 138 (451)
T COG0541 99 PPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADT 138 (451)
T ss_pred CCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEeccc
Confidence 467888888888 466788999999999999998887654
No 199
>PRK10391 oriC-binding nucleoid-associated protein; Provisional
Probab=21.09 E-value=25 Score=27.71 Aligned_cols=11 Identities=64% Similarity=0.945 Sum_probs=4.8
Q ss_pred hhccc-cccCCC
Q 015317 363 ILFDV-CVPKNV 373 (409)
Q Consensus 363 ~~~~~-~~~~~~ 373 (409)
-|||+ ||||.|
T Consensus 55 kLyD~gkVP~sV 66 (71)
T PRK10391 55 RLFDLGQVPKSV 66 (71)
T ss_pred cccccccCCHHH
Confidence 34442 444443
No 200
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=20.89 E-value=1.3e+02 Score=30.42 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=22.8
Q ss_pred HHHHHHHHHhcCCCCcEEEEEccCcHHHHHHHHHHHH
Q 015317 72 DVLKELVEELKFGPCPVVFASFSGGPKACMYKVLQIT 108 (409)
Q Consensus 72 ~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~l~qll 108 (409)
+.++.|++..+ +-.|.+.|+|.||+++.-....+.
T Consensus 159 ~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~i~ 193 (336)
T KOG4569|consen 159 AELRRLIELYP--NYSIWVTGHSLGGALASLAALDLV 193 (336)
T ss_pred HHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHHHH
Confidence 34455666555 345999999999985444444443
No 201
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=20.34 E-value=2.4e+02 Score=25.65 Aligned_cols=52 Identities=25% Similarity=0.332 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCcEEEEccccccccCchhhhHHHHHHHHHHHHHhcCCCCcEEEEEccCcHHHHHHH
Q 015317 37 KRFVQLYSSLGWNSLICHSQFLNMFFPEKAESLALDVLKELVEELKFGPCPVVFASFSGGPKACMYK 103 (409)
Q Consensus 37 ~KYa~lY~~lG~nvLvv~s~~~~~~~p~~~~~~a~~vL~~L~~~~~~~~~pIl~H~FSnGG~~~l~~ 103 (409)
.++.+.|+++||.++.+.... .+. +++|.+.++. ..++|-|-|+=|..++..
T Consensus 2 ~~~~~~y~~~gy~v~~~S~~~-----~~g--------~~~l~~~l~~--k~~vl~G~SGvGKSSLiN 53 (161)
T PF03193_consen 2 EELLEQYEKLGYPVFFISAKT-----GEG--------IEELKELLKG--KTSVLLGQSGVGKSSLIN 53 (161)
T ss_dssp HHHHHHHHHTTSEEEE-BTTT-----TTT--------HHHHHHHHTT--SEEEEECSTTSSHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEeCCC-----CcC--------HHHHHHHhcC--CEEEEECCCCCCHHHHHH
Confidence 467889999999998875542 111 2344444443 569999999888654443
Done!