Query 015319
Match_columns 409
No_of_seqs 218 out of 1726
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 10:31:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 4.9E-55 1.7E-59 450.0 28.8 285 106-408 24-344 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 3.2E-49 1.1E-53 399.2 32.1 254 108-408 13-297 (376)
3 1rmg_A Rgase A, rhamnogalactur 100.0 1.9E-49 6.5E-54 406.2 25.8 247 106-408 17-267 (422)
4 2uvf_A Exopolygalacturonase; G 100.0 4E-48 1.4E-52 412.7 27.0 282 106-408 153-483 (608)
5 1czf_A Polygalacturonase II; b 100.0 4E-45 1.4E-49 367.3 24.9 240 108-408 28-273 (362)
6 2iq7_A Endopolygalacturonase; 100.0 8.3E-45 2.8E-49 362.2 23.5 237 124-408 6-248 (339)
7 1nhc_A Polygalacturonase I; be 100.0 1.1E-44 3.9E-49 360.8 23.4 236 124-408 6-247 (336)
8 1hg8_A Endopolygalacturonase; 100.0 4E-44 1.4E-48 358.5 25.6 238 125-408 7-260 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 3.1E-44 1.1E-48 358.0 24.2 236 125-408 11-252 (339)
10 1k5c_A Endopolygalacturonase; 100.0 8E-45 2.7E-49 361.6 17.0 229 126-408 8-244 (335)
11 2x6w_A Tail spike protein; vir 100.0 2.1E-42 7.3E-47 360.7 9.0 228 107-394 49-320 (600)
12 3gq8_A Preneck appendage prote 100.0 4.3E-38 1.5E-42 329.6 21.1 230 107-408 20-267 (609)
13 3gqn_A Preneck appendage prote 100.0 3.3E-38 1.1E-42 335.2 20.0 229 108-408 21-267 (772)
14 1h80_A IOTA-carrageenase; hydr 100.0 1.2E-33 4.2E-38 291.1 23.6 219 107-396 19-255 (464)
15 1x0c_A Isopullulanase; glycosi 100.0 4.2E-34 1.4E-38 300.6 11.9 236 113-407 146-443 (549)
16 1ogo_X Dextranase; hydrolase, 100.0 4.6E-32 1.6E-36 285.4 18.9 203 139-389 229-446 (574)
17 2vbk_A Tailspike-protein; vira 100.0 9.7E-32 3.3E-36 268.4 9.1 212 107-387 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 3.5E-28 1.2E-32 244.2 21.6 225 109-394 2-279 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 4.1E-22 1.4E-26 212.2 17.3 221 106-392 46-303 (758)
20 3jur_A EXO-poly-alpha-D-galact 99.7 1.1E-16 3.8E-21 164.6 18.4 138 264-408 215-379 (448)
21 1bhe_A PEHA, polygalacturonase 99.7 2.2E-15 7.7E-20 151.7 23.7 187 165-408 108-331 (376)
22 2iq7_A Endopolygalacturonase; 99.7 2.3E-15 7.8E-20 149.7 21.5 137 264-408 125-287 (339)
23 2uvf_A Exopolygalacturonase; G 99.7 2.9E-15 9.8E-20 159.6 19.6 132 264-397 356-502 (608)
24 1ia5_A Polygalacturonase; glyc 99.6 1E-14 3.6E-19 144.9 21.4 137 264-408 129-289 (339)
25 1hg8_A Endopolygalacturonase; 99.6 2.7E-14 9.3E-19 142.5 22.7 136 264-407 129-298 (349)
26 1nhc_A Polygalacturonase I; be 99.6 2.1E-14 7.1E-19 142.6 21.1 135 264-407 125-285 (336)
27 1czf_A Polygalacturonase II; b 99.6 5.2E-14 1.8E-18 141.1 19.7 135 264-407 151-311 (362)
28 1ogo_X Dextranase; hydrolase, 99.6 8.4E-14 2.9E-18 146.7 20.9 200 142-408 265-506 (574)
29 1rmg_A Rgase A, rhamnogalactur 99.5 2.9E-13 9.9E-18 138.3 20.4 135 264-408 152-303 (422)
30 1k5c_A Endopolygalacturonase; 99.5 2.7E-13 9.4E-18 134.5 18.8 136 264-408 121-281 (335)
31 2inu_A Insulin fructotransfera 99.5 9.6E-14 3.3E-18 139.1 14.3 206 105-355 10-274 (410)
32 1x0c_A Isopullulanase; glycosi 99.5 6.4E-13 2.2E-17 139.7 21.3 207 141-408 222-475 (549)
33 3eqn_A Glucan 1,3-beta-glucosi 99.0 3.2E-09 1.1E-13 113.5 17.2 68 104-179 395-465 (758)
34 3gq8_A Preneck appendage prote 99.0 5.2E-09 1.8E-13 110.1 15.9 93 293-392 182-282 (609)
35 3gqn_A Preneck appendage prote 99.0 5.1E-09 1.7E-13 112.0 15.5 85 293-384 182-272 (772)
36 1h80_A IOTA-carrageenase; hydr 98.9 5.8E-08 2E-12 100.0 19.5 96 288-393 170-278 (464)
37 1ru4_A Pectate lyase, PEL9A; p 98.9 6.4E-08 2.2E-12 98.0 19.5 90 264-354 131-228 (400)
38 2pyg_A Poly(beta-D-mannuronate 98.5 1.9E-06 6.4E-11 85.8 14.7 122 263-399 173-311 (377)
39 1gq8_A Pectinesterase; hydrola 98.4 5.7E-06 2E-10 81.2 16.6 107 269-386 92-209 (319)
40 2x6w_A Tail spike protein; vir 98.4 7.5E-07 2.6E-11 93.4 10.3 120 264-397 200-361 (600)
41 1xg2_A Pectinesterase 1; prote 98.4 6.7E-06 2.3E-10 80.6 15.8 107 269-386 88-205 (317)
42 1dbg_A Chondroitinase B; beta 98.4 4.6E-06 1.6E-10 86.7 15.4 86 270-355 125-239 (506)
43 3vmv_A Pectate lyase; polysacc 98.3 5.7E-06 2E-10 81.4 14.5 119 264-392 96-233 (326)
44 1pcl_A Pectate lyase E; lyase 98.3 6.3E-06 2.1E-10 82.1 14.7 100 287-386 97-227 (355)
45 1pcl_A Pectate lyase E; lyase 98.3 5E-05 1.7E-09 75.5 20.3 92 264-355 97-226 (355)
46 1pxz_A Major pollen allergen J 98.3 9.4E-06 3.2E-10 80.6 14.0 72 264-340 107-202 (346)
47 2x3h_A K5 lyase, K5A lyase; ba 98.2 0.00015 5E-09 69.8 21.1 193 106-365 61-271 (542)
48 1pxz_A Major pollen allergen J 98.2 5.8E-06 2E-10 82.1 11.6 101 285-386 105-226 (346)
49 1air_A Pectate lyase C, PELC; 98.2 8.5E-05 2.9E-09 73.8 18.2 129 264-402 104-276 (353)
50 1vbl_A Pectate lyase 47; PL 47 98.1 5.1E-06 1.7E-10 84.3 9.2 99 287-385 149-281 (416)
51 3zsc_A Pectate trisaccharide-l 98.1 0.00016 5.6E-09 71.4 18.9 117 263-388 117-251 (340)
52 1idk_A Pectin lyase A; signal, 98.1 1.7E-05 6E-10 79.0 12.0 62 265-331 126-197 (359)
53 2qy1_A Pectate lyase II; GAG l 98.1 4.4E-05 1.5E-09 75.2 14.2 78 264-341 87-182 (330)
54 3zsc_A Pectate trisaccharide-l 98.1 2.3E-05 7.8E-10 77.5 11.6 116 271-386 68-194 (340)
55 1qcx_A Pectin lyase B; beta-he 98.0 0.00018 6.1E-09 71.7 18.0 62 265-331 126-197 (359)
56 1air_A Pectate lyase C, PELC; 98.0 1.5E-05 5.1E-10 79.3 9.9 112 270-386 88-215 (353)
57 2o04_A Pectate lyase, PL; hexa 98.0 9.9E-06 3.4E-10 81.8 8.7 98 287-385 144-275 (399)
58 2qy1_A Pectate lyase II; GAG l 98.0 1.8E-05 6.3E-10 78.0 10.3 119 266-386 67-204 (330)
59 1pe9_A Pectate lyase A; parall 97.9 2.4E-05 8E-10 78.1 9.4 100 286-385 103-237 (361)
60 1qcx_A Pectin lyase B; beta-he 97.9 0.00014 4.7E-09 72.5 13.5 121 263-391 154-284 (359)
61 2nsp_A Pectinesterase A; micha 97.8 0.00031 1E-08 69.5 14.4 106 268-386 93-230 (342)
62 3uw0_A Pectinesterase; right-h 97.8 0.0006 2.1E-08 68.0 16.2 107 268-386 119-255 (364)
63 1idk_A Pectin lyase A; signal, 97.7 0.00014 4.8E-09 72.4 10.9 82 271-355 108-198 (359)
64 1pe9_A Pectate lyase A; parall 97.6 0.00031 1.1E-08 70.0 11.9 77 264-340 104-213 (361)
65 1vbl_A Pectate lyase 47; PL 47 97.5 0.00042 1.4E-08 70.3 11.5 78 264-341 149-259 (416)
66 2inu_A Insulin fructotransfera 97.5 0.0005 1.7E-08 69.0 10.7 111 271-395 136-262 (410)
67 1ru4_A Pectate lyase, PEL9A; p 97.5 0.00027 9.3E-09 71.4 8.9 92 264-361 109-213 (400)
68 2o04_A Pectate lyase, PL; hexa 97.3 0.0011 3.7E-08 66.9 10.7 77 264-341 144-253 (399)
69 3vmv_A Pectate lyase; polysacc 97.2 0.011 3.7E-07 58.0 16.9 108 263-386 121-249 (326)
70 1dbg_A Chondroitinase B; beta 96.3 0.014 4.9E-07 60.4 10.3 121 265-387 246-392 (506)
71 2vbk_A Tailspike-protein; vira 96.3 0.012 4.3E-07 59.4 9.0 71 264-357 197-286 (514)
72 3grh_A YBHC, acyl-COA thioeste 95.9 0.09 3.1E-06 53.1 13.5 108 265-385 195-330 (422)
73 1gq8_A Pectinesterase; hydrola 94.6 0.21 7E-06 48.7 10.8 84 290-386 90-175 (319)
74 1xg2_A Pectinesterase 1; prote 94.5 0.15 5.1E-06 49.7 9.8 84 290-386 86-171 (317)
75 2nsp_A Pectinesterase A; micha 94.0 0.33 1.1E-05 47.7 11.1 82 292-385 94-192 (342)
76 3t9g_A Pectate lyase; PL3, par 92.9 3.7 0.00013 36.8 14.9 126 271-406 52-177 (196)
77 3uw0_A Pectinesterase; right-h 91.3 1.1 3.7E-05 44.4 10.6 84 291-385 119-219 (364)
78 1ee6_A Pectate lyase; parallel 89.1 5.5 0.00019 35.8 12.2 124 271-404 48-171 (197)
79 3b4n_A Endo-pectate lyase; pec 88.2 20 0.00067 34.8 17.9 16 200-216 124-139 (344)
80 3t9g_A Pectate lyase; PL3, par 88.0 2.9 0.0001 37.5 9.6 42 264-305 89-130 (196)
81 3ju4_A Endo-N-acetylneuraminid 84.2 0.31 1.1E-05 49.0 1.3 40 115-157 4-43 (670)
82 1ee6_A Pectate lyase; parallel 63.0 24 0.00083 31.6 7.8 41 264-304 85-125 (197)
83 3hkx_A Amidase; alpha-beta-BET 61.7 7.7 0.00026 36.3 4.7 40 110-149 23-62 (283)
84 3riq_A Tailspike protein; righ 61.0 1.4E+02 0.0047 29.9 13.8 15 263-277 146-160 (543)
85 2vfm_A Bifunctional tail prote 60.1 31 0.0011 33.8 8.5 23 292-318 268-290 (559)
86 2v5i_A Salmonella typhimurium 59.2 31 0.0011 33.8 8.3 22 293-318 272-293 (559)
87 3zbd_A NSP1, P9, non-structura 57.6 17 0.00059 29.4 5.3 82 112-201 19-104 (113)
88 3riq_A Tailspike protein; righ 56.2 27 0.00094 34.9 7.5 23 292-318 261-283 (543)
89 2xc1_A Bifunctional tail prote 53.5 43 0.0015 34.1 8.5 45 344-395 424-468 (666)
90 2x3h_A K5 lyase, K5A lyase; ba 48.3 83 0.0028 30.3 9.2 39 249-287 202-240 (542)
91 3b4n_A Endo-pectate lyase; pec 43.4 62 0.0021 31.4 7.6 107 272-380 181-300 (344)
92 3fwy_A Light-independent proto 43.0 26 0.00091 33.4 5.1 40 103-147 44-83 (314)
93 3p8k_A Hydrolase, carbon-nitro 38.1 26 0.00087 32.6 4.1 40 110-149 23-62 (281)
94 2es4_D Lipase chaperone; prote 38.1 12 0.00042 36.3 1.9 19 117-135 73-91 (332)
95 3dl8_E Protein-export membrane 32.7 18 0.00063 29.3 1.8 20 6-25 51-70 (107)
96 3grh_A YBHC, acyl-COA thioeste 29.7 1.7E+02 0.0057 29.3 8.5 113 262-386 225-362 (422)
97 1pk8_A RAT synapsin I; ATP bin 24.4 16 0.00054 36.7 0.0 17 62-78 20-36 (422)
98 3n6z_A Putative immunoglobulin 24.4 4.9E+02 0.017 25.2 11.6 35 271-305 105-142 (363)
99 3v1v_A 2-MIB synthase, 2-methy 23.7 17 0.00057 36.6 0.0 8 60-67 5-12 (433)
100 1j5p_A Aspartate dehydrogenase 23.1 49 0.0017 30.7 3.1 36 108-149 85-120 (253)
101 2lie_A CCL2 lectin; sugar bind 28.4 18 0.00061 30.4 0.0 43 106-153 59-104 (153)
102 3end_A Light-independent proto 22.0 78 0.0027 29.2 4.3 41 104-149 38-78 (307)
103 2l9u_A Receptor tyrosine-prote 21.3 15 0.00051 23.6 -0.6 18 14-39 17-34 (40)
104 2w7z_A EFSQNR, pentapeptide re 20.9 66 0.0023 28.2 3.4 15 371-385 150-164 (214)
105 3bh7_B Protein XRP2; protein-p 20.7 5.4E+02 0.018 24.8 10.2 31 264-298 63-93 (352)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=4.9e-55 Score=450.03 Aligned_cols=285 Identities=27% Similarity=0.416 Sum_probs=239.8
Q ss_pred CCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCccc
Q 015319 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDW 185 (409)
Q Consensus 106 ~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~ 185 (409)
++.+++|++|||+|||++|||+|||+||++|++.++++|+||+| +|+++||.| +++++|+++|+|++++++.+|
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~~ggg~v~vP~G-~yl~~~l~l-----~s~v~l~l~gtL~~s~d~~~y 97 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIEELSKQGGGRLIVPEG-VFLTGPIHL-----KSNIELHVKGTIKFIPDPERY 97 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHHHHHHHTCEEEEECSS-EEEESCEEC-----CTTEEEEESSEEEECCCGGGG
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHHhhhhcCCeEEEECCC-cEEEeeeEe-----CCCcEEEEEEEEEecCCHHHh
Confidence 34789999999999999999999999999877778999999999 899999998 789999999999999999888
Q ss_pred -CC------C-----ceeeEEEecccCeeeeeceEEeCCC--cccccCCCCC----CCCCcc----ccccccccCCCCCC
Q 015319 186 -GK------G-----LLWWLDFTKLKGITIQGKGIIDGRG--SVWWQDYPYD----DPIDDE----SKLIIPLHNNTLPY 243 (409)
Q Consensus 186 -~~------g-----~~~~i~~~~~~nVtI~G~G~IdG~G--~~~w~~~~~~----~p~~~~----~~~~~~~~~~~~~~ 243 (409)
+. + ..+||.+.+++||+|+|+|+|||+| +.||...... .+.... .+.+.. +.
T Consensus 98 ~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~------~~ 171 (448)
T 3jur_A 98 LPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKE------MA 171 (448)
T ss_dssp CSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHH------HH
T ss_pred CcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhh------hh
Confidence 21 1 2468999999999999999999999 8999753100 000000 000000 00
Q ss_pred CCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccE
Q 015319 244 KPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDV 323 (409)
Q Consensus 244 ~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV 323 (409)
.+..+...++.+.....||++|.|.+|+|++|+|++++|+++|++++..|++|+|+|++|.++ ++|+|||++.+|+||
T Consensus 172 ~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV 249 (448)
T 3jur_A 172 ERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYM 249 (448)
T ss_dssp HHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEE
T ss_pred cccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCE
Confidence 001122222223344579999999999999999999999999999999999999999999986 589999999999999
Q ss_pred EEEeeEEeeCCCeEEeCCC-----------ceeEEEEEEEE--cCCC-eeEEEecCCCCCCCcEEEEEEEeEEEecccce
Q 015319 324 LIHTSNLACGDDCVSIQTG-----------CSNVYVHNVNC--GPGH-GISIGSLGKDNTKACVSNITVRDVMMHNTMNG 389 (409)
Q Consensus 324 ~I~n~~i~~gDD~Iai~sg-----------~~nV~I~n~~~--~~g~-GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~G 389 (409)
+|+||+|.++||||+++++ ++||+|+||+| ..+| ||+|||++ .+.|+||+|+||+|.++.+|
T Consensus 250 ~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~G 325 (448)
T 3jur_A 250 LIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERA 325 (448)
T ss_dssp EEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEE
T ss_pred EEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccce
Confidence 9999999999999999998 89999999999 6677 89999984 56799999999999999999
Q ss_pred EEEEeecCCCCeEEEEEeC
Q 015319 390 VRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 390 i~Ikt~~G~~g~v~~~~~~ 408 (409)
++||||.|++|+|+||+.+
T Consensus 326 irIKt~~g~gG~v~nI~f~ 344 (448)
T 3jur_A 326 LRLKTNSRRGGYMENIFFI 344 (448)
T ss_dssp EEEECCTTTCSEEEEEEEE
T ss_pred EEEEEEcCCCceEeeEEEE
Confidence 9999999999999999864
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3.2e-49 Score=399.21 Aligned_cols=254 Identities=30% Similarity=0.449 Sum_probs=221.5
Q ss_pred ceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECC---ceEEEeCCcccCCCccccceEEEecc--eEEcCCCC
Q 015319 108 SVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPA---ESVFLVGPMSFSGPYCQANIIFQLDG--TIIAPTGS 182 (409)
Q Consensus 108 ~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~---G~~y~~~~i~l~g~~~~s~~~l~l~G--tl~~~~~~ 182 (409)
.+++|++|| .+|||+|||+||+ ||.. |++|+||+ | +|++++|.| +++++|++++ +|+++.+.
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~-Gg~v~~~~~~~g-~yl~g~i~l-----~s~vtL~l~~Ga~L~~s~~~ 79 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALN-NCDQ-GKAVRLSAGSTS-VFLSGPLSL-----PSGVSLLIDKGVTLRAVNNA 79 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHT-TCCT-TCEEEEECSSSS-EEEESCEEC-----CTTCEEEECTTCEEEECSCS
T ss_pred CeEEECCCC-----CCccHHHHHHHHH-Hhcc-CCcEEEECCCCc-eEEEeEEEE-----CCCCEEEECCCeEEEeCCCH
Confidence 369999986 4899999999998 5655 45555554 6 999999999 7899999995 99999998
Q ss_pred cccCCC-------------ceeeEEEecccCeeeeeceEEeCCC--------cccccCCCCCCCCCccccccccccCCCC
Q 015319 183 KDWGKG-------------LLWWLDFTKLKGITIQGKGIIDGRG--------SVWWQDYPYDDPIDDESKLIIPLHNNTL 241 (409)
Q Consensus 183 ~~~~~g-------------~~~~i~~~~~~nVtI~G~G~IdG~G--------~~~w~~~~~~~p~~~~~~~~~~~~~~~~ 241 (409)
.+|... ..+||.+.+++||+|+|.|+|||+| +.||+.... .
T Consensus 80 ~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~-------~----------- 141 (376)
T 1bhe_A 80 KSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAAD-------A----------- 141 (376)
T ss_dssp GGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHH-------H-----------
T ss_pred HHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCcccccccccc-------c-----------
Confidence 888542 3579999999999999999999999 467753100 0
Q ss_pred CCCCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcc
Q 015319 242 PYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSK 321 (409)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~ 321 (409)
.. ......||.+|.|.+|+|++|+|++|+|+++|++++..|++++|+|++|.++.+++|+|||++.+|+
T Consensus 142 ----------~~-~~~~~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~ 210 (376)
T 1bhe_A 142 ----------KV-KKLKQNTPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSK 210 (376)
T ss_dssp ----------HH-HTCEECCCCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCE
T ss_pred ----------cc-cCccCCCCeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCc
Confidence 00 0112248999999999999999999999999999999999999999999998888999999999999
Q ss_pred cEEEEeeEEeeCCCeEEeCC-----CceeEEEEEEEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeec
Q 015319 322 DVLIHTSNLACGDDCVSIQT-----GCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQ 396 (409)
Q Consensus 322 nV~I~n~~i~~gDD~Iai~s-----g~~nV~I~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~ 396 (409)
||+|+||+|.++||||++++ +++||+|+||+|.++|||+|||++. .|+||+|+||+|.++.+|+|||||+
T Consensus 211 nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGSe~~-----~v~nV~v~n~~~~~t~~GirIKt~~ 285 (376)
T 1bhe_A 211 NITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSETM-----GVYNVTVDDLKMNGTTNGLRIKSDK 285 (376)
T ss_dssp EEEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEEEES-----SEEEEEEEEEEEESCSEEEEEECCT
T ss_pred eEEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEeccCCc-----cEeeEEEEeeEEeCCCcEEEEEEec
Confidence 99999999999999999996 6999999999999999999999852 7999999999999999999999999
Q ss_pred CCCCeEEEEEeC
Q 015319 397 VMIPSGTQCYNS 408 (409)
Q Consensus 397 G~~g~v~~~~~~ 408 (409)
|++|+|+||+.+
T Consensus 286 g~~G~v~ni~f~ 297 (376)
T 1bhe_A 286 SAAGVVNGVRYS 297 (376)
T ss_dssp TTCCEEEEEEEE
T ss_pred CCCceEeeEEEE
Confidence 999999999864
No 3
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.9e-49 Score=406.21 Aligned_cols=247 Identities=23% Similarity=0.426 Sum_probs=219.3
Q ss_pred CCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeCC-cccCCCccccceEEEecceEEcCCCCcc
Q 015319 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGP-MSFSGPYCQANIIFQLDGTIIAPTGSKD 184 (409)
Q Consensus 106 ~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~-i~l~g~~~~s~~~l~l~Gtl~~~~~~~~ 184 (409)
...+++|++|||++||++|||+|||+||++ |+ ++++|+||+| +|++++ |.|.+ .++++|+++|+++++.+..
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~a-c~-~g~~V~vP~G-~Yli~~~l~l~g---~s~v~l~l~G~~l~~~~~~- 89 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWAA-CK-SGGLVYIPSG-NYALNTWVTLTG---GSATAIQLDGIIYRTGTAS- 89 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHHH-HT-BTCEEEECSS-EEEECSCEEEES---CEEEEEEECSEEEECCCCS-
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHHH-CC-CCCEEEECCC-eEEeCCceeecC---CCeEEEEEcCcEEcccCCC-
Confidence 456899999999999999999999999984 55 4889999999 788885 99976 4899999999988865421
Q ss_pred cCCCceeeE---EEecccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCC
Q 015319 185 WGKGLLWWL---DFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIK 261 (409)
Q Consensus 185 ~~~g~~~~i---~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 261 (409)
..|+ ...++++++|+|+|+|||+|..||... ..|
T Consensus 90 -----~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~--------------------------------------~~r 126 (422)
T 1rmg_A 90 -----GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEG--------------------------------------TYG 126 (422)
T ss_dssp -----SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTT--------------------------------------CCC
T ss_pred -----CceEEEEecCceeEEeeccCEEEECCcchhhcCC--------------------------------------CCC
Confidence 2344 446677778899999999999999531 128
Q ss_pred ceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEEeCC
Q 015319 262 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQT 341 (409)
Q Consensus 262 p~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~s 341 (409)
|.+|+|.+|+|++|+|++|+|+++|++++..|++|+|+|++|.+ .+..++|||++.+ +||+|+||+|.++||||++++
T Consensus 127 p~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s 204 (422)
T 1rmg_A 127 ARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKS 204 (422)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEE
T ss_pred ceEEEEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCC
Confidence 99999999999999999999999999999999999999999999 4557999999999 999999999999999999999
Q ss_pred CceeEEEEEEEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 342 GCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 342 g~~nV~I~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
+++||+|+||+|.++|||+|||+|++ +.|+||+|+||+|.++.+||+||+|.| .|+|+||+.+
T Consensus 205 ~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~ 267 (422)
T 1rmg_A 205 PANNILVESIYCNWSGGCAMGSLGAD---TDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLE 267 (422)
T ss_dssp EEEEEEEEEEEEESSSEEEEEEECTT---EEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEE
T ss_pred CCcCEEEEeEEEcCCcceeecccCCC---CcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEE
Confidence 99999999999999999999999743 579999999999999999999999865 6899999864
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=4e-48 Score=412.72 Aligned_cols=282 Identities=23% Similarity=0.374 Sum_probs=227.8
Q ss_pred CCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEec--ceEEcCCCCc
Q 015319 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLD--GTIIAPTGSK 183 (409)
Q Consensus 106 ~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~--Gtl~~~~~~~ 183 (409)
...+++|++|||+|||++|||+|||+||+ +|.. |++|+||+| +|++++|.| +++++|+|+ ++|+++.+..
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~-g~~v~vP~G-~y~~g~i~l-----ks~v~L~l~~gatL~~s~d~~ 224 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP-GCRVEIPAG-TYKSGALWL-----KSDMTLNLQAGAILLGSENPD 224 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT-TEEEEECSE-EEEECCEEC-----CSSEEEEECTTEEEEECSCGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC-CCEEEECCC-ceEecceec-----cCceEEEecCCcEEEecCCHH
Confidence 45699999999999999999999999997 4554 899999999 899999998 789999994 7999999988
Q ss_pred ccCCCc-----------eeeEEEec--------ccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCC
Q 015319 184 DWGKGL-----------LWWLDFTK--------LKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYK 244 (409)
Q Consensus 184 ~~~~g~-----------~~~i~~~~--------~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~ 244 (409)
+|..+. ..+|.+.+ ++||+|+|+|+|||+|..||..... .++...-.|.... .
T Consensus 225 ~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~----~~~~g~~~p~~~~----~ 296 (608)
T 2uvf_A 225 DYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEI----TDELGRSLPQYVA----S 296 (608)
T ss_dssp GSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEE----ECTTSCEEEEECC----C
T ss_pred HCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccc----ccccccccccccc----c
Confidence 886321 14677776 7999999999999999888743100 0000000000000 0
Q ss_pred CCCCccc---------------ccc--CCCCCCCceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCC
Q 015319 245 PPTPIRS---------------ELS--GKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG 307 (409)
Q Consensus 245 ~~~~~~~---------------~~~--~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~ 307 (409)
..+.... ... ......||.+|.|.+|+|++|+|++|+|+++|++++..|++|+|+|++|.. .
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~ 375 (608)
T 2uvf_A 297 KNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-Y 375 (608)
T ss_dssp CTTTHHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-T
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-C
Confidence 0000000 000 000114899999999999999999999999999999999999999999875 4
Q ss_pred CCCCCCceeecCcccEEEEeeEEeeCCCeEEeCCC----------ceeEEEEEEEEcCCCee-EEEecCCCCCCCcEEEE
Q 015319 308 DSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTG----------CSNVYVHNVNCGPGHGI-SIGSLGKDNTKACVSNI 376 (409)
Q Consensus 308 ~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg----------~~nV~I~n~~~~~g~Gi-sIGs~g~~~~~~~v~nI 376 (409)
+++|+|||++.+|+||+|+||+|.++||||++++| ++||+|+||+|.++||+ .|||+ +.+.|+||
T Consensus 376 ~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI 451 (608)
T 2uvf_A 376 DANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDI 451 (608)
T ss_dssp TCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEE
T ss_pred CCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEE
Confidence 56899999999999999999999999999999986 79999999999999985 58996 66789999
Q ss_pred EEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 377 TVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 377 ~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
+|+||+|.++.+||+||||+|++|.|+||+.+
T Consensus 452 ~v~n~~~~~t~~GirIKt~~g~gG~v~nI~~~ 483 (608)
T 2uvf_A 452 LAENNVMYLTDIGLRAKSTSTIGGGARNVTFR 483 (608)
T ss_dssp EEESCEEESCSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEeEEEECCCceEEEeeecCCCceEECcEEE
Confidence 99999999999999999999999999999864
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=4e-45 Score=367.26 Aligned_cols=240 Identities=25% Similarity=0.400 Sum_probs=210.4
Q ss_pred ceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCC
Q 015319 108 SVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGK 187 (409)
Q Consensus 108 ~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~ 187 (409)
.+++|++ ++|||+|+++|...++++|+||+|.|+.+. .| +++++|+++|++.+. ...|.
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~~c~~~~g~~v~vP~G~~l~l~--~l-----~~~~~l~~~g~~~~~--~~~w~- 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKAKCSTITLNNIEVPAGTTLDLT--GL-----TSGTKVIFEGTTTFQ--YEEWA- 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGGGCSEEEEESCEECTTCCEEEC--SC-----CTTCEEEEESEEEEC--CCCSC-
T ss_pred CEEEECC-----------HHHHHHHHHHhhccCCCEEEECCCEEEEee--cc-----CCCeEEEEeCcEEec--cccCC-
Confidence 5788877 689999998766567889999999554322 23 679999999998863 35675
Q ss_pred CceeeEEEecccCeeeee--ceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeE
Q 015319 188 GLLWWLDFTKLKGITIQG--KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTAL 265 (409)
Q Consensus 188 g~~~~i~~~~~~nVtI~G--~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i 265 (409)
..||.+. .+||+|+| .|+|||+|+.||+... .....||.++
T Consensus 87 --g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~----------------------------------~~~~~rP~~i 129 (362)
T 1czf_A 87 --GPLISMS-GEHITVTGASGHLINCDGARWWDGKG----------------------------------TSGKKKPKFF 129 (362)
T ss_dssp --CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCT----------------------------------TSSSCCCCCE
T ss_pred --CcEEEEe-CccEEEEcCCCcEEECCCchhhcccC----------------------------------CCCCCCCeEE
Confidence 3688874 59999999 6999999999997641 1123589999
Q ss_pred EEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCC-C---CCCCCceeecCcccEEEEeeEEeeCCCeEEeCC
Q 015319 266 RFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG-D---SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQT 341 (409)
Q Consensus 266 ~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~-~---~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~s 341 (409)
.|.+|+|++|+|++++|+++|++++. |++|+|+|++|.++. + ++|+||||+.+|+||+|+||+|.++||||++++
T Consensus 130 ~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks 208 (362)
T 1czf_A 130 YAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS 208 (362)
T ss_dssp EEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS
T ss_pred EEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC
Confidence 99999999999999999999999999 999999999999963 3 789999999999999999999999999999999
Q ss_pred CceeEEEEEEEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 342 GCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 342 g~~nV~I~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
+ +||+|+||+|.++|||+|||+|.+ +.+.|+||+|+||+|.++.+|+|||+|+|+.|.|+||+.+
T Consensus 209 g-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ 273 (362)
T 1czf_A 209 G-ENIWFTGGTCIGGHGLSIGSVGDR-SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYS 273 (362)
T ss_dssp E-EEEEEESCEEESSCCEEEEEECSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEE
T ss_pred C-eEEEEEEEEEeCCceeEEeecccc-CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEE
Confidence 6 999999999999999999999876 6788999999999999999999999999999999999864
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=8.3e-45 Score=362.23 Aligned_cols=237 Identities=26% Similarity=0.404 Sum_probs=207.7
Q ss_pred ccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCCCceeeEEEecccCeee
Q 015319 124 DDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITI 203 (409)
Q Consensus 124 DdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~g~~~~i~~~~~~nVtI 203 (409)
.||+|||+||++|...++++|+||+|+|+.+. .| +++++|+++|++.+. +..|. ..||.+.. +||+|
T Consensus 6 ~dt~aiq~ai~~c~~~~g~~v~vP~G~~~~l~--~l-----~~~~~l~~~g~~~~~--~~~w~---g~~i~~~~-~nv~I 72 (339)
T 2iq7_A 6 TDAAAAIKGKASCTSIILNGIVVPAGTTLDMT--GL-----KSGTTVTFQGKTTFG--YKEWE---GPLISFSG-TNINI 72 (339)
T ss_dssp SCHHHHHHHGGGCSEEEEESCEECTTCCEEEC--SC-----CTTCEEEEESEEEEC--CCCSC---CCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHHHhhccCCCeEEECCCEEEEee--cc-----CCCeEEEEeCcEEcc--ccccc---CcEEEEEc-ccEEE
Confidence 47999999998766666889999999544322 33 679999999988863 45665 35787765 99999
Q ss_pred eec--eEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEe
Q 015319 204 QGK--GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQ 281 (409)
Q Consensus 204 ~G~--G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ 281 (409)
+|. |+|||+|+.||+... ......||.+|.|.+|+|++|++++++
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~---------------------------------~~~~~~rp~~i~~~~~~nv~i~giti~ 119 (339)
T 2iq7_A 73 NGASGHSIDCQGSRWWDSKG---------------------------------SNGGKTKPKFFYAHSLKSSNIKGLNVL 119 (339)
T ss_dssp EECTTCEEECCGGGTCCSCG---------------------------------GGSSSCCCCCEEEEEEEEEEEECCEEE
T ss_pred EcCCCCEEECCccccccccc---------------------------------ccCCCCCCeEEEEeeeCcEEEEEEEEE
Confidence 997 799999999997531 011235899999999999999999999
Q ss_pred cCCCCeEEeecCccEEEEeEEEeCCCC----CCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcCCC
Q 015319 282 NSPQCHLKFDNCIGVVVHDVSVSSPGD----SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGH 357 (409)
Q Consensus 282 ns~~~~i~~~~~~nV~I~n~~I~s~~~----~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~g~ 357 (409)
|+++|++++..|++|+|++++|.++.+ ++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++|
T Consensus 120 nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~gh 198 (339)
T 2iq7_A 120 NTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSG-TNITFTGGTCSGGH 198 (339)
T ss_dssp CCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSC
T ss_pred eCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCC-ccEEEEeEEEECCc
Confidence 999999999999999999999998742 7899999999999999999999999999999996 99999999999999
Q ss_pred eeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 358 GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 358 GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
||+|||+|.+ +.+.|+||+|+||+|.++.+|+|||+|+|+.|+|+||+.+
T Consensus 199 GisiGSlg~~-~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ 248 (339)
T 2iq7_A 199 GLSIGSVGGR-SDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYS 248 (339)
T ss_dssp CEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEE
T ss_pred eEEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEE
Confidence 9999999877 6688999999999999999999999999999999999864
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.1e-44 Score=360.79 Aligned_cols=236 Identities=27% Similarity=0.427 Sum_probs=206.4
Q ss_pred ccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCCCceeeEEEecccCeee
Q 015319 124 DDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITI 203 (409)
Q Consensus 124 DdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~g~~~~i~~~~~~nVtI 203 (409)
.||+|||+|+++|...++++|+||+|.|+.+. .| +++++|+++|++.+. +..|. ..||.+. .+||+|
T Consensus 6 ~~t~aiq~ai~~c~~~gg~~v~vP~G~~~~l~--~l-----~~~~~l~~~g~~~~~--~~~w~---g~li~~~-~~nv~I 72 (336)
T 1nhc_A 6 TSASEASESISSCSDVVLSSIEVPAGETLDLS--DA-----ADGSTITFEGTTSFG--YKEWK---GPLIRFG-GKDLTV 72 (336)
T ss_dssp SSHHHHHHHGGGCSEEEEESCEECTTCCEECT--TC-----CTTCEEEEESEEEEC--CCCSC---CCSEECC-EESCEE
T ss_pred CCHHHHHHHHHHhhccCCCeEEECCCEEEEee--cc-----CCCeEEEEeceEEcc--ccccc---CcEEEEe-cCCEEE
Confidence 58999999998766667789999999544321 33 679999999998863 35565 3577775 499999
Q ss_pred eec--eEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEe
Q 015319 204 QGK--GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQ 281 (409)
Q Consensus 204 ~G~--G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ 281 (409)
+|. |+|||+|+.||+... ......||++|.|.+|+|++|++++|+
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~---------------------------------~~~~~~rp~~i~~~~~~nv~i~~i~i~ 119 (336)
T 1nhc_A 73 TMADGAVIDGDGSRWWDSKG---------------------------------TNGGKTKPKFMYIHDVEDSTFKGINIK 119 (336)
T ss_dssp EECTTCEEECCGGGTCCSCT---------------------------------TTSSSCCCCCEEEEEEEEEEEESCEEE
T ss_pred EcCCCeEEECCccccccccC---------------------------------cCCCCCCceEEEEeeeCcEEEEEEEEE
Confidence 997 799999999997631 011235899999999999999999999
Q ss_pred cCCCCeEEeecCccEEEEeEEEeCCCC----CCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcCCC
Q 015319 282 NSPQCHLKFDNCIGVVVHDVSVSSPGD----SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGH 357 (409)
Q Consensus 282 ns~~~~i~~~~~~nV~I~n~~I~s~~~----~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~g~ 357 (409)
|+++|++++. |++|+|++++|.++.. ++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++|
T Consensus 120 nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~gh 197 (336)
T 1nhc_A 120 NTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGH 197 (336)
T ss_dssp CCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSE-EEEEEESCEEESSS
T ss_pred eCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCC-eEEEEEeEEEECCc
Confidence 9999999999 9999999999999743 7899999999999999999999999999999996 99999999999999
Q ss_pred eeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 358 GISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 358 GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
||+|||+|.+ ..+.|+||+|+||+|.++.+|+|||+|+|+.|+|+||+.+
T Consensus 198 GisiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ 247 (336)
T 1nhc_A 198 GLSIGSVGGR-DDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYS 247 (336)
T ss_dssp EEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEE
T ss_pred CceEccCccc-cCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEEe
Confidence 9999999876 6688999999999999999999999999999999999864
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=4e-44 Score=358.53 Aligned_cols=238 Identities=23% Similarity=0.372 Sum_probs=205.6
Q ss_pred cHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCCCceeeEEEecccCeeee
Q 015319 125 DTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITIQ 204 (409)
Q Consensus 125 dT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~g~~~~i~~~~~~nVtI~ 204 (409)
||+|||+|+++|...++++|+||+|+|+.+. .| +++++|+++|++.+. ...|.. ..||.+.. +||+|+
T Consensus 7 ~t~aiq~ai~~c~~~gg~~v~vP~G~~l~l~--~l-----~~~~~l~~~g~~~~~--~~~w~~--g~~i~~~~-~ni~I~ 74 (349)
T 1hg8_A 7 EYSGLATAVSSCKNIVLNGFQVPTGKQLDLS--SL-----QNDSTVTFKGTTTFA--TTADND--FNPIVISG-SNITIT 74 (349)
T ss_dssp SGGGHHHHHHHCSEEEECCCEECTTCCEEET--TC-----CTTCEEEECSEEEEC--CCCCTT--CCSEEEEE-ESCEEE
T ss_pred CHHHHHHHHHhccccCCCEEEECCCEEEEee--cc-----CCCeEEEEcCceecc--cccccC--CceEEEEC-ccEEEE
Confidence 7999999998776667889999999544322 22 679999999998763 356732 36788854 999999
Q ss_pred e--ceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEE-E-eeeeEEEeceEE
Q 015319 205 G--KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRF-Y-GSFNVTVTGITI 280 (409)
Q Consensus 205 G--~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~-~-~~~nv~I~gvti 280 (409)
| .|+|||+|+.||+.... ......||++|.| . .|+|++|+|++|
T Consensus 75 G~~~G~IdG~G~~ww~~~~~--------------------------------~~~~~~rP~~i~~~~~~~~nv~I~giti 122 (349)
T 1hg8_A 75 GASGHVIDGNGQAYWDGKGS--------------------------------NSNSNQKPDHFIVVQKTTGNSKITNLNI 122 (349)
T ss_dssp ECTTCEEECCGGGTCCSCTT--------------------------------CTTSCCCCSEEEEEEEEESSEEEESCEE
T ss_pred ecCCCEEcCCcchhhhcccc--------------------------------cCCCCCCCeEEEEeecCcCcEEEEEEEE
Confidence 9 69999999999976310 0011258999999 7 788999999999
Q ss_pred ecCCCCeEEeecCccEEEEeEEEeCCC-C-----------CCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEE
Q 015319 281 QNSPQCHLKFDNCIGVVVHDVSVSSPG-D-----------SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYV 348 (409)
Q Consensus 281 ~ns~~~~i~~~~~~nV~I~n~~I~s~~-~-----------~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I 348 (409)
+|+++|++++..|++|+|++++|.++. + ++|+|||++.+|+||+|+||+|.++||||+++++ +||+|
T Consensus 123 ~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i 201 (349)
T 1hg8_A 123 QNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIVV 201 (349)
T ss_dssp ECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSE-EEEEE
T ss_pred EcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCC-eEEEE
Confidence 999999999999999999999999852 2 5899999999999999999999999999999995 99999
Q ss_pred EEEEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 349 HNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 349 ~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
+||+|.++|||+|||+|.+ +.+.|+||+|+||+|.++.+|+|||+|+|+.|.|+||+.+
T Consensus 202 ~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ 260 (349)
T 1hg8_A 202 SNMYCSGGHGLSIGSVGGK-SDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQ 260 (349)
T ss_dssp EEEEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEE
T ss_pred EeEEEeCCcceEEcccccc-ccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEE
Confidence 9999999999999999877 6788999999999999999999999999999999999864
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.1e-44 Score=358.04 Aligned_cols=236 Identities=26% Similarity=0.402 Sum_probs=206.4
Q ss_pred cHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCCCceeeEEEecccCeeee
Q 015319 125 DTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITIQ 204 (409)
Q Consensus 125 dT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~g~~~~i~~~~~~nVtI~ 204 (409)
-++|||+|+++|...++++|+||+|.|+.+. .| +++++|+++|++.+. +..|. ..||.+.. +||+|+
T Consensus 11 g~~aiq~ai~~c~~~gg~~v~vP~G~~l~l~--~l-----~~~~~l~~~g~~~~~--~~~w~---g~li~~~~-~nv~I~ 77 (339)
T 1ia5_A 11 GASSASKSKTSCSTIVLSNVAVPSGTTLDLT--KL-----NDGTHVIFSGETTFG--YKEWS---GPLISVSG-SDLTIT 77 (339)
T ss_dssp HHHHHHHHGGGCSEEEEESCEECTTCCEEEC--SC-----CTTCEEEEESEEEEC--CCCSC---CCSEEEEE-ESCEEE
T ss_pred chHHHHHHHHHhhccCCCeEEECCCEEEEee--cc-----CCCeEEEEeCcEEcc--ccccc---CcEEEEEc-CcEEEE
Confidence 3679999998776667889999999544322 33 689999999998863 45665 36787765 999999
Q ss_pred ec--eEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEec
Q 015319 205 GK--GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQN 282 (409)
Q Consensus 205 G~--G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~n 282 (409)
|. |+|||+|+.||+... ......||.+|.|.+|+|++|++++|+|
T Consensus 78 G~~gG~IdG~G~~~w~~~~---------------------------------~~~~~~rp~~i~~~~~~nv~i~~i~i~n 124 (339)
T 1ia5_A 78 GASGHSINGDGSRWWDGEG---------------------------------GNGGKTKPKFFAAHSLTNSVISGLKIVN 124 (339)
T ss_dssp ECTTCEEECCGGGTCSSCT---------------------------------TTSSSCCCCCEEEEEEEEEEEESCEEEC
T ss_pred cCCCeEEeCCCCccccccc---------------------------------cCCCCCCCeEEEEeecCcEEEEEEEEEc
Confidence 97 799999999997641 0112358999999999999999999999
Q ss_pred CCCCeEEeecCccEEEEeEEEeCCC-C---CCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcCCCe
Q 015319 283 SPQCHLKFDNCIGVVVHDVSVSSPG-D---SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHG 358 (409)
Q Consensus 283 s~~~~i~~~~~~nV~I~n~~I~s~~-~---~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~g~G 358 (409)
+++|++++..|++|+|++++|.++. + ++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++||
T Consensus 125 sp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghG 203 (339)
T 1ia5_A 125 SPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHG 203 (339)
T ss_dssp CSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSSC
T ss_pred CCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCC-eEEEEEeEEEECCce
Confidence 9999999999999999999999873 3 6899999999999999999999999999999996 999999999999999
Q ss_pred eEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 359 ISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 359 isIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
|+|||+|.+ +.+.|+||+|+||+|.++.+|++||+|+|+.|+|+||+.+
T Consensus 204 isiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ 252 (339)
T 1ia5_A 204 LSIGSVGGR-SDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYK 252 (339)
T ss_dssp EEEEEECSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEE
T ss_pred EEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEE
Confidence 999999876 6688999999999999999999999999999999999864
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=8e-45 Score=361.57 Aligned_cols=229 Identities=24% Similarity=0.379 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCCCceeeEEEecccCeeeee
Q 015319 126 TKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGKGLLWWLDFTKLKGITIQG 205 (409)
Q Consensus 126 T~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~g~~~~i~~~~~~nVtI~G 205 (409)
++|||+ +++|...++++|+||+|.||. |.| +++++|+++|++.+. ...|.. +||.+. .+||+|+|
T Consensus 8 ~~aiq~-i~aC~~~gg~~v~vP~G~~l~---l~l-----~~~~~l~~~g~~~~~--~~~w~~---~~i~~~-~~ni~I~G 72 (335)
T 1k5c_A 8 VDDAKD-IAGCSAVTLNGFTVPAGNTLV---LNP-----DKGATVTMAGDITFA--KTTLDG---PLFTID-GTGINFVG 72 (335)
T ss_dssp TTGGGG-CTTCSEEEECCEEECTTCCEE---ECC-----CTTCEEEECSCEEEC--CCCSCS---CSEEEE-EEEEEEEC
T ss_pred HHHhHH-HHhcccCCCCEEEECCCEEEE---EEe-----CCCeEEEEeccEecc--cccccC---cEEEEE-ccCEEEEe
Confidence 689999 876555678899999995442 343 789999999999873 356753 688886 59999999
Q ss_pred -ceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEecCC
Q 015319 206 -KGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSP 284 (409)
Q Consensus 206 -~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~ 284 (409)
.|+|||+|+.||+... ......||++|.|..|+ ++|+|++++|++
T Consensus 73 ~~G~idG~G~~ww~~~~---------------------------------~~~~~~rP~~i~~~~~~-v~i~giti~nsp 118 (335)
T 1k5c_A 73 ADHIFDGNGALYWDGKG---------------------------------TNNGTHKPHPFLKIKGS-GTYKKFEVLNSP 118 (335)
T ss_dssp TTCEEECCGGGTCCSCT---------------------------------TTSSSCCCCCSEEEEEE-EEEESCEEESCS
T ss_pred CccEEcCChhHhhhccc---------------------------------ccCCCCCCeEEEEeceE-EEEEEEEEECCC
Confidence 5999999999997631 01123589999999999 999999999999
Q ss_pred CCeEEeecCcc-EEEEeEEEeCCC-C----CCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcCCCe
Q 015319 285 QCHLKFDNCIG-VVVHDVSVSSPG-D----SPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHG 358 (409)
Q Consensus 285 ~~~i~~~~~~n-V~I~n~~I~s~~-~----~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~g~G 358 (409)
+|++++..|++ |+|+|++|.++. + ++|+||||+ +|+||+|+||+|.++||||+++++ +||+|+||+|.++||
T Consensus 119 ~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghG 196 (335)
T 1k5c_A 119 AQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHG 196 (335)
T ss_dssp SCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCC
T ss_pred cceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCcc
Confidence 99999999999 999999999974 3 789999999 999999999999999999999997 999999999999999
Q ss_pred eEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCC-CeEEEEEeC
Q 015319 359 ISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMI-PSGTQCYNS 408 (409)
Q Consensus 359 isIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~-g~v~~~~~~ 408 (409)
|+|||+++ .+.|+||+|+||+|.++.+|+|||||+|++ |.|+||+.+
T Consensus 197 isIGS~g~---~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ 244 (335)
T 1k5c_A 197 ISIGSIAT---GKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYD 244 (335)
T ss_dssp EEEEEECT---TCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEE
T ss_pred CeEeeccC---CCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEE
Confidence 99999964 578999999999999999999999999999 999999864
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=2.1e-42 Score=360.66 Aligned_cols=228 Identities=18% Similarity=0.132 Sum_probs=185.9
Q ss_pred CceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEe------------CCcccCCCccccceEEEecc
Q 015319 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV------------GPMSFSGPYCQANIIFQLDG 174 (409)
Q Consensus 107 ~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~------------~~i~l~g~~~~s~~~l~l~G 174 (409)
..++||+||||++| ||+|||+||++|++.++++|+||+|.+|++ ++|.| +++++|+|+|
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAIdaCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L-----kSnVtL~LdG 119 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAIDYVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL-----RSNVNLNIEG 119 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHHHHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC-----CTTEEEEECS
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHHHhhhcCCCEEEECCCCEEEecccccccccccccceEE-----cCceEEeeec
Confidence 35799999999999 999999999987778899999999977888 78887 7999999999
Q ss_pred eEEcCCCCcccCCC---ceee---EEEecccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCC
Q 015319 175 TIIAPTGSKDWGKG---LLWW---LDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTP 248 (409)
Q Consensus 175 tl~~~~~~~~~~~g---~~~~---i~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
+|+++.+..+|+.. ...| |.+.+++||+|+|+|+|||+|..||...
T Consensus 120 tL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~---------------------------- 171 (600)
T 2x6w_A 120 RIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASS---------------------------- 171 (600)
T ss_dssp EEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTT----------------------------
T ss_pred EEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCcccccccc----------------------------
Confidence 99999999888641 1334 8889999999999999999999999531
Q ss_pred ccccccCCCCCCCceeEEEEeeeeEEEeceEEecC-CCCeEEe---ecCccEEEEeEE----EeCCCCCCCCCceeecCc
Q 015319 249 IRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNS-PQCHLKF---DNCIGVVVHDVS----VSSPGDSPNTDGIHLQNS 320 (409)
Q Consensus 249 ~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns-~~~~i~~---~~~~nV~I~n~~----I~s~~~~~n~DGI~l~~s 320 (409)
..+..||. +.|.+|+ |+|++++|+ ++|++++ ..|+||+|+|++ |.+ ++|+|||
T Consensus 172 -------~~~~~RP~-l~f~~c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI----- 232 (600)
T 2x6w_A 172 -------QLRNGVAF-GRSYNCS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS----- 232 (600)
T ss_dssp -------CCEEEEEC-CSEEEEE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-----
T ss_pred -------ccCCCCCE-EEEeeeE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-----
Confidence 00113677 7888888 999999999 9999999 999999999999 776 6899999
Q ss_pred ccEEEEeeEEeeCCCeEEe-CCCce-eEEEEEEEEcCCC-eeEEEecCCC---------------CCCCcEEEEEEEeEE
Q 015319 321 KDVLIHTSNLACGDDCVSI-QTGCS-NVYVHNVNCGPGH-GISIGSLGKD---------------NTKACVSNITVRDVM 382 (409)
Q Consensus 321 ~nV~I~n~~i~~gDD~Iai-~sg~~-nV~I~n~~~~~g~-GisIGs~g~~---------------~~~~~v~nI~v~n~~ 382 (409)
|+|+||+|.++||||+| +++.+ ++.++ +|.++| ||+|||+... +.++.|+||+|+|++
T Consensus 233 --V~I~nc~I~tGDDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~ggV~NV~V~NrIKt~~G~GG~V~NItfeNI~ 308 (600)
T 2x6w_A 233 --TVYVNCPYSGVESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVNGYCRGAYVVMHAAEAAGAGSYAYNMQVENNI 308 (600)
T ss_dssp --EEEECSSSEEEESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEEEESEEEEEEECGGGCTTTCSEEEEEEEESCE
T ss_pred --EEEEeeEEecCCcEEEEecCCCcCCeEEE--EEcCCCCcEEecccccCcEEEEEEEEEEEeecCCCceEEEEEEEEEE
Confidence 99999999999999999 99964 47777 677777 8999996310 123445555555555
Q ss_pred EecccceEEEEe
Q 015319 383 MHNTMNGVRIKT 394 (409)
Q Consensus 383 ~~~~~~Gi~Ikt 394 (409)
|.+...+|.|..
T Consensus 309 m~nV~~~I~i~q 320 (600)
T 2x6w_A 309 AVIYGQFVILGS 320 (600)
T ss_dssp EEESSEEEEEEE
T ss_pred EEccceEEEeCC
Confidence 555554444443
No 12
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=4.3e-38 Score=329.64 Aligned_cols=230 Identities=18% Similarity=0.198 Sum_probs=187.1
Q ss_pred CceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEe-CCcccCCCccccceEEEecc----eEEcCCC
Q 015319 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG----TIIAPTG 181 (409)
Q Consensus 107 ~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~-~~i~l~g~~~~s~~~l~l~G----tl~~~~~ 181 (409)
+++++|+||||+|||++|||+|||+||++ |++|+||+| +|++ ++|.| +++++|++++ +|+++++
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----Gg~V~iP~G-tYlis~~l~l-----~snv~L~g~g~~~t~L~~~~~ 88 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL-----PSNTVLTGAGKRNAVIRFMDS 88 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHT-----SSCEEECSE-EEEESSCEEE-----CSSEEEEESCTTTEEEEECTT
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHc-----CCEEEECCc-cEEEeCceEE-----CCCcEEEEeeCCCCEEEeCCC
Confidence 35799999999999999999999999985 389999999 7888 99999 6899999985 6777766
Q ss_pred CcccCCCceeeEEEecccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCC
Q 015319 182 SKDWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIK 261 (409)
Q Consensus 182 ~~~~~~g~~~~i~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 261 (409)
...|......|+.+.+++||+|+|. +|||+|+.||.... .....|
T Consensus 89 ~p~~~~li~~lI~a~~~~NItItG~-TIDGNG~~~g~~~~----------------------------------~~g~~R 133 (609)
T 3gq8_A 89 VGRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQGIS----------------------------------GIGGSR 133 (609)
T ss_dssp CCSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCC----------------------------------CSSTTT
T ss_pred CCCCCceeeeeeeecccccEEEEee-EEECCccccCcccc----------------------------------cCCCCC
Confidence 5544333345667889999999996 99999984432110 012258
Q ss_pred ceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecC------cccEEEEeeEE-eeCC
Q 015319 262 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------SKDVLIHTSNL-ACGD 334 (409)
Q Consensus 262 p~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~------s~nV~I~n~~i-~~gD 334 (409)
|.+|.|..|+|++|++++++|++.+++.+..+.+ | ||+++++ |+||+|+||+| .++|
T Consensus 134 P~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~---------------N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGD 197 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGL---------------D-YPYLGDGTTAPNPSENIWIENCEATGFGD 197 (609)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSSCSEEEECSSS---------------S-CCCCCTTCCCSSCCEEEEEESCEEESCSS
T ss_pred ccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCC---------------C-ccccCCCccccccceeEEEEeeEEEecCC
Confidence 9999999999999999999999986554433332 2 6666666 99999999999 6799
Q ss_pred CeEEeCCCceeEEEEEEEEcC------CCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 335 DCVSIQTGCSNVYVHNVNCGP------GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 335 D~Iai~sg~~nV~I~n~~~~~------g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
|||++++ ++||+|+||+|.+ ++||+||+. .+||+|+||+|.++.+||+||++.+ .+.++||++.
T Consensus 198 DcIaIks-seNI~I~Nc~~~gp~G~S~~~GIsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~~-~~~v~NV~I~ 267 (609)
T 3gq8_A 198 DGITTHH-SQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHGD-APAAYNISIN 267 (609)
T ss_dssp CSEEECS-CEEEEEESCEEECCSSCSSCCSEEECTT--------CEEEEEESEEEESSSEEEEEEECTT-SCCCEEEEEE
T ss_pred CEEEecC-CeeEEEEeEEEECCCCCCCcccEEccCC--------cccEEEEeeEEECCCCEEEEEecCC-CCccccEEEE
Confidence 9999987 8999999999943 478999853 3999999999999999999999874 5788988763
No 13
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=3.3e-38 Score=335.23 Aligned_cols=229 Identities=19% Similarity=0.223 Sum_probs=187.0
Q ss_pred ceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEe-CCcccCCCccccceEEEecc----eEEcCCCC
Q 015319 108 SVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG----TIIAPTGS 182 (409)
Q Consensus 108 ~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~-~~i~l~g~~~~s~~~l~l~G----tl~~~~~~ 182 (409)
.+++|+||||+|||++|||+|||+||++ |++|+||+| +|++ ++|.| +++++|.+++ +|+++++.
T Consensus 21 ~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----Gg~V~IPaG-tYlisg~I~L-----~snv~L~Geg~~~t~Lk~~~d~ 89 (772)
T 3gqn_A 21 FGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL-----PSNTVLTGAGKRNAVIRFMDSV 89 (772)
T ss_dssp SSEESGGGTCCCEEEEECHHHHHHHHHT-----TSCEEECSE-EEEESSCEEE-----CSSCEEEEEEEEEEEEEECTTC
T ss_pred cEEEeEecccCCCCChhHHHHHHHHHHc-----CCEEEECCc-cEEEEeEEEE-----CCCcEEEEecCCCCEEEeCCCC
Confidence 5799999999999999999999999985 389999999 7888 99999 6899998875 57777765
Q ss_pred cccCCCceeeEEEecccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCc
Q 015319 183 KDWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKP 262 (409)
Q Consensus 183 ~~~~~g~~~~i~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp 262 (409)
..|.....+|+.+.+++||+|+|. +|||+|+.||... ......||
T Consensus 90 p~~~~li~~lI~a~gveNItItG~-TIDGNG~~~g~~~----------------------------------~~~g~~RP 134 (772)
T 3gqn_A 90 GRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQGI----------------------------------SGIGGSRE 134 (772)
T ss_dssp CSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSSC----------------------------------CCSSTTTT
T ss_pred CCCCceeeeeeeccCceeEEEEee-EEeCCccccCccc----------------------------------ccCCCCCc
Confidence 554333345677889999999996 9999998333211 00122589
Q ss_pred eeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecC------cccEEEEeeEE-eeCCC
Q 015319 263 TALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------SKDVLIHTSNL-ACGDD 335 (409)
Q Consensus 263 ~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~------s~nV~I~n~~i-~~gDD 335 (409)
.+|.|.+|+|++|++++++|++.+++. |.++.+ | ||+++++ |+||+|+||+| .++||
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp~~gI~-------------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDD 198 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCTLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDD 198 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCSSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSC
T ss_pred cEEEEEeeceEEEEeEEEEeCCCCCEE-------------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcC
Confidence 999999999999999999999985444 444332 2 6666666 99999999999 66999
Q ss_pred eEEeCCCceeEEEEEEEEcC------CCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 336 CVSIQTGCSNVYVHNVNCGP------GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 336 ~Iai~sg~~nV~I~n~~~~~------g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
||++++ ++||+|+||+|.+ ++||+||+. .+||+|+||+|.++.+|||||++. +.+.++||++.
T Consensus 199 cIAIks-SeNI~I~Nc~c~gphG~S~~~GIsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~ 267 (772)
T 3gqn_A 199 GITTHH-SQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISIN 267 (772)
T ss_dssp SEEECS-CEEEEEESCEEECCSSSSSCCSEEECTT--------CEEEEEEEEEEESSSEEEEECCCT-TSCCCEEEEEE
T ss_pred eEEecC-CceEEEEeEEEECCCCCCCcccEEecCC--------cccEEEEceEEECCCcEEEEEEeC-CCCccccEEEE
Confidence 999987 8999999999943 479999853 399999999999999999999885 56789999763
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.2e-33 Score=291.12 Aligned_cols=219 Identities=17% Similarity=0.259 Sum_probs=176.2
Q ss_pred CceEE-EeeccccCCCCCccHHHHHHHHHHHhhc-CCcEEEECCceEEEeCCcccCCCccccceEEEec--ceEEcCCC-
Q 015319 107 SSVFN-VKDFGAKGNGVSDDTKAFEAAWAAACKV-EASIMVVPAESVFLVGPMSFSGPYCQANIIFQLD--GTIIAPTG- 181 (409)
Q Consensus 107 ~~~~~-V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~-gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~--Gtl~~~~~- 181 (409)
..+|+ |++|||+|||++|||+|||+||++|++. ++++|+||+| +|++++|.| +++++|+|+ ++|+++.+
T Consensus 19 ~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~ggg~V~vP~G-tYl~g~I~l-----ks~v~L~l~~GatL~~s~~t 92 (464)
T 1h80_A 19 DVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNG-TYHFLGIQM-----KSNVHIRVESDVIIKPTWNG 92 (464)
T ss_dssp SEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTSTTCEEEEECSS-EEEECSEEC-----CTTEEEEECTTCEEEECCCT
T ss_pred cceeeehhccCcCCCCCchhHHHHHHHHHHHhhccCCcEEEECCC-eEEEeeEec-----cCceEEEEcCCcEEEeccCC
Confidence 46889 9999999999999999999999887776 7899999999 899999998 789999998 47888764
Q ss_pred -CcccCCCceeeEEE---ecccCeeeeece---EEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCcccccc
Q 015319 182 -SKDWGKGLLWWLDF---TKLKGITIQGKG---IIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELS 254 (409)
Q Consensus 182 -~~~~~~g~~~~i~~---~~~~nVtI~G~G---~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (409)
...| .++.+ .+++||+|+|.| +|||+|..
T Consensus 93 d~~~y-----~~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~--------------------------------------- 128 (464)
T 1h80_A 93 DGKNH-----RLFEVGVNNIVRNFSFQGLGNGFLVDFKDSR--------------------------------------- 128 (464)
T ss_dssp TCSCE-----EEEEESSSSCEEEEEEEECTTCEEEECTTCS---------------------------------------
T ss_pred CcccC-----CceEeecccCccceEEECcCcceEEeCCCCC---------------------------------------
Confidence 3332 34443 789999999998 88887731
Q ss_pred CCCCCCCceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCC
Q 015319 255 GKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGD 334 (409)
Q Consensus 255 ~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gD 334 (409)
..+|++|.|.+|+|++|++++|+| .|.++ .|.+|.+ .|+|||++ .|+||+|+||+|.++|
T Consensus 129 ----~~rp~~i~~~~~~Nv~I~gIti~n--~w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gd 188 (464)
T 1h80_A 129 ----DKNLAVFKLGDVRNYKISNFTIDD--NKTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNAL 188 (464)
T ss_dssp ----CCBEEEEEECSEEEEEEEEEEEEC--CSCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCC
T ss_pred ----CCCceEEEEEeeccEEEeeeEEec--cceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCC
Confidence 127889999999999999999999 45543 4433322 16899988 7899999999999998
Q ss_pred CeEE--eCCCceeEEEEEEEEcCCCeeEEEecC----CCCCCCcEEEEEEEeEEEecccceEEEEeec
Q 015319 335 DCVS--IQTGCSNVYVHNVNCGPGHGISIGSLG----KDNTKACVSNITVRDVMMHNTMNGVRIKTWQ 396 (409)
Q Consensus 335 D~Ia--i~sg~~nV~I~n~~~~~g~GisIGs~g----~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~ 396 (409)
||+. ...+++||+|+||+|.+++||+|.+-+ .. ..+.++||+|+||+|.+..++|+|+++.
T Consensus 189 dgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~~ 255 (464)
T 1h80_A 189 FGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPHF 255 (464)
T ss_dssp TTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECTT
T ss_pred CeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCCC
Confidence 8774 234589999999999998888886530 11 3567999999999999999999999654
No 15
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=4.2e-34 Score=300.62 Aligned_cols=236 Identities=16% Similarity=0.225 Sum_probs=188.1
Q ss_pred eeccccCCCCCccHHHHHHHHHHHhh--------------------------cCCcEEEECCceEEEe---CCcccCCCc
Q 015319 113 KDFGAKGNGVSDDTKAFEAAWAAACK--------------------------VEASIMVVPAESVFLV---GPMSFSGPY 163 (409)
Q Consensus 113 ~d~GA~gdg~tDdT~Aiq~Ai~~a~~--------------------------~gg~~v~vP~G~~y~~---~~i~l~g~~ 163 (409)
..|||++||.+|++.+|. +|++++. .++++|+||+| +|++ ++|.|
T Consensus 146 ~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l---- 219 (549)
T 1x0c_A 146 DLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL---- 219 (549)
T ss_dssp GEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE----
T ss_pred ccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe----
Confidence 469999999999999887 5554433 35889999999 8886 58888
Q ss_pred cccceE-EEec-ceEEcCCCCcccCCCceeeEEEe-cccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCC
Q 015319 164 CQANII-FQLD-GTIIAPTGSKDWGKGLLWWLDFT-KLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNT 240 (409)
Q Consensus 164 ~~s~~~-l~l~-Gtl~~~~~~~~~~~g~~~~i~~~-~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~ 240 (409)
+++++ |+++ |..+. .++.+. +++||+|+|+|+|||+|..||.... ..
T Consensus 220 -~s~~~~L~l~~GA~L~------------gs~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~--------~~--------- 269 (549)
T 1x0c_A 220 -SSSVTWVYFAPGAYVK------------GAVEFLSTASEVKASGHGVLSGEQYVWYADPD--------EG--------- 269 (549)
T ss_dssp -CTTCCEEEECTTEEEE------------SCEEECCCSSEEEEESSCEEECTTSCTTEEGG--------GT---------
T ss_pred -cCCCCeEecCCCCEEE------------EEEEEecCceeEEEEeeEEEECCCceecccCc--------cc---------
Confidence 78999 9998 64332 123344 8999999999999999999995310 00
Q ss_pred CCCCCCCCccccccCCCCCCCceeEEE------EeeeeEEEeceEEecCCCCeEEee-cC-cc--EEEEeEEEeCCCCCC
Q 015319 241 LPYKPPTPIRSELSGKMPSIKPTALRF------YGSFNVTVTGITIQNSPQCHLKFD-NC-IG--VVVHDVSVSSPGDSP 310 (409)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~rp~~i~~------~~~~nv~I~gvti~ns~~~~i~~~-~~-~n--V~I~n~~I~s~~~~~ 310 (409)
+. ..-..||++|.| .+|+|++|+|++++|+++|++++. .| ++ |+|+|+++.++. ..
T Consensus 270 ------------~~-~~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~ 335 (549)
T 1x0c_A 270 ------------YQ-KASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YG 335 (549)
T ss_dssp ------------TE-ECGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BT
T ss_pred ------------cc-ccccCCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CC
Confidence 00 000125667777 999999999999999999999965 56 69 999999998743 36
Q ss_pred CCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcC--CCe-eEEEecCCCCCCCcEEEEEEEeEEEeccc
Q 015319 311 NTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGP--GHG-ISIGSLGKDNTKACVSNITVRDVMMHNTM 387 (409)
Q Consensus 311 n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~--g~G-isIGs~g~~~~~~~v~nI~v~n~~~~~~~ 387 (409)
|+|||++. +||+|+||+|.++||||++++ +||+|+||+|.. +|+ |+||+. .+.|+||+|+||+|.++.
T Consensus 336 NTDGidi~--~nV~I~n~~i~~gDDcIaIks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 336 QTDGLEMY--PGTILQDVFYHTDDDGLKMYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp TCCCCBCC--TTCEEEEEEEEESSCCEECCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECC
T ss_pred CCCccccc--CCEEEEeeEEeCCCCEEEECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECcc
Confidence 89999999 999999999999999999999 999999999975 567 999983 567999999999999886
Q ss_pred c------eEEEEe---ec-C-------CCCeEEEEEe
Q 015319 388 N------GVRIKT---WQ-V-------MIPSGTQCYN 407 (409)
Q Consensus 388 ~------Gi~Ikt---~~-G-------~~g~v~~~~~ 407 (409)
+ |.+|++ |+ | .+|.|+||+.
T Consensus 407 ~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f 443 (549)
T 1x0c_A 407 YANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTV 443 (549)
T ss_dssp CCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEE
T ss_pred ccccccceEEEecccccccCccccCcCCCceEccEEE
Confidence 4 666888 31 3 3678887763
No 16
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.98 E-value=4.6e-32 Score=285.45 Aligned_cols=203 Identities=18% Similarity=0.204 Sum_probs=158.9
Q ss_pred cCCcEEEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCc-ccCC-C--ceeeEEEecccCeeeeeceEEeCCCc
Q 015319 139 VEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSK-DWGK-G--LLWWLDFTKLKGITIQGKGIIDGRGS 214 (409)
Q Consensus 139 ~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~-~~~~-g--~~~~i~~~~~~nVtI~G~G~IdG~G~ 214 (409)
.++++||||+| +|+++++.|.|| |+ ++.|+|.+..+.+ -|.. | +..||.+.+++||+|+|+|+|||+|.
T Consensus 229 ~ggg~v~vP~G-~yl~~~~~~~gp-c~-----~g~G~i~lkSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~ 301 (574)
T 1ogo_X 229 GAKSILYFPPG-VYWMNQDQSGNS-GK-----LGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENY 301 (574)
T ss_dssp CSSSEEEECSE-EEEECBCTTCCB-SC-----SSSCCEECCTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTS
T ss_pred CCCCEEEECCc-EEEEeccccCCc-cc-----ccceEEEecCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCc
Confidence 47899999999 899966666554 32 2223333333332 2211 1 24568899999999999999999999
Q ss_pred ccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEE------eeeeEEEeceEEecCCCCeE
Q 015319 215 VWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFY------GSFNVTVTGITIQNSPQCHL 288 (409)
Q Consensus 215 ~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~------~~~nv~I~gvti~ns~~~~i 288 (409)
.||.... .. + .....||.++.|. +|+||+|+|++++|+++|++
T Consensus 302 ~ww~~~~---~~--------------------------~--~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i 350 (574)
T 1ogo_X 302 VYQANAG---DN--------------------------Y--IAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTM 350 (574)
T ss_dssp CTTCBTT---TT--------------------------T--BSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSE
T ss_pred ccccccc---cc--------------------------c--ccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEE
Confidence 9995420 00 0 0001367777777 99999999999999999999
Q ss_pred EeecCccE--EEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcC--CCe-eEEEe
Q 015319 289 KFDNCIGV--VVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGP--GHG-ISIGS 363 (409)
Q Consensus 289 ~~~~~~nV--~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~--g~G-isIGs 363 (409)
++..|++| +|+|+++.++. ..++||||++ +||+|+||+|.++||||+|++ +||+|+||+|.. +|| |+|||
T Consensus 351 ~~~~c~nV~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS 425 (574)
T 1ogo_X 351 DFNGNSGISSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGW 425 (574)
T ss_dssp EECSSSCEEEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCS
T ss_pred eecCCCChhhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcC
Confidence 99999999 99999998642 2469999999 999999999999999999998 999999999775 567 99998
Q ss_pred cCCCCCCCcEEEEEEEeEEEecccce
Q 015319 364 LGKDNTKACVSNITVRDVMMHNTMNG 389 (409)
Q Consensus 364 ~g~~~~~~~v~nI~v~n~~~~~~~~G 389 (409)
. .+.|+||+|+||+|.++.++
T Consensus 426 ~-----~g~V~NV~v~N~~i~~~~~~ 446 (574)
T 1ogo_X 426 T-----SRDISGVTIDTLNVIHTRYI 446 (574)
T ss_dssp S-----CCCEEEEEEEEEEEEECCCS
T ss_pred C-----CCcEEEEEEEeEEEECCccc
Confidence 3 57899999999999987653
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=9.7e-32 Score=268.41 Aligned_cols=212 Identities=16% Similarity=0.156 Sum_probs=163.2
Q ss_pred CceEEEeeccccCCCCCccHHHHHHHHHHHhhc-CCcEEEECCce---EEEe-CCcccCCCccccceEEEecc--eEEcC
Q 015319 107 SSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKV-EASIMVVPAES---VFLV-GPMSFSGPYCQANIIFQLDG--TIIAP 179 (409)
Q Consensus 107 ~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~-gg~~v~vP~G~---~y~~-~~i~l~g~~~~s~~~l~l~G--tl~~~ 179 (409)
..++||+||||+|||++|||+|||+||++||+. +|++||||+|. +|++ ++|.| +++++|.+++ +|+.+
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L-----kSnV~L~Ge~~AtIl~s 123 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI-----PGGVNIRGVGKASQLRA 123 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE-----CTTEEEECCSTTSEEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe-----cCCeEEEEecCceEeec
Confidence 468999999999999999999999999999987 78999999993 4655 67777 7899999884 55443
Q ss_pred CCC-c-c-cCCCceeeEEEecccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCC
Q 015319 180 TGS-K-D-WGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGK 256 (409)
Q Consensus 180 ~~~-~-~-~~~g~~~~i~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (409)
... . . .......|+.+.+++||+|+|+|+|||++..|+...
T Consensus 124 ~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~------------------------------------ 167 (514)
T 2vbk_A 124 KSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAED------------------------------------ 167 (514)
T ss_dssp CTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTC------------------------------------
T ss_pred cccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccc------------------------------------
Confidence 221 0 0 000123567788999999999999999876442111
Q ss_pred CCCCCceeEEEEeeeeEEEeceEE--ecCCCCeEEeecCccEEEE-eEEEeCCCCCCCCCceeecCcccEEEEeeEEeeC
Q 015319 257 MPSIKPTALRFYGSFNVTVTGITI--QNSPQCHLKFDNCIGVVVH-DVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG 333 (409)
Q Consensus 257 ~~~~rp~~i~~~~~~nv~I~gvti--~ns~~~~i~~~~~~nV~I~-n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~g 333 (409)
....++..+ .+++|.|++++. .+++.|++++..|++++++ ++.+. ++|+||+|.||.|+.|
T Consensus 168 ~~~Rq~~~~---~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVG 231 (514)
T 2vbk_A 168 SVIRQVYGW---VFDNVMVNEVETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRG 231 (514)
T ss_dssp SSCCCEESE---EEESCEEEEEEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECT
T ss_pred eeeeccceE---EeeeEEEEeEEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecC
Confidence 000122233 367999999954 4788999999999999988 66654 3799999999999999
Q ss_pred CCeEEeCCC-----------ceeEEEEEEEEcCCCe-eEEEecCCCCCCCcEEE-EEEEeEEEeccc
Q 015319 334 DDCVSIQTG-----------CSNVYVHNVNCGPGHG-ISIGSLGKDNTKACVSN-ITVRDVMMHNTM 387 (409)
Q Consensus 334 DD~Iai~sg-----------~~nV~I~n~~~~~g~G-isIGs~g~~~~~~~v~n-I~v~n~~~~~~~ 387 (409)
||||++++| ++||. || +.||||. +.++|+| |+|++|.|.+++
T Consensus 232 DdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~---m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 232 NYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSET---MCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp TSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSE---EEESCSEEEEESCCEEEEEE
T ss_pred cceeeeecCceecccccCCcchhcc---------cccEEECchh---hcccccccEEEEeeeccCCc
Confidence 999999997 55665 76 9999982 4567999 999999998763
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.96 E-value=3.5e-28 Score=244.20 Aligned_cols=225 Identities=22% Similarity=0.333 Sum_probs=163.4
Q ss_pred eEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeC--------CcccCCCccccceEEEecc---e-E
Q 015319 109 VFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVG--------PMSFSGPYCQANIIFQLDG---T-I 176 (409)
Q Consensus 109 ~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~--------~i~l~g~~~~s~~~l~l~G---t-l 176 (409)
+++|+||||+|||++|||+|||+||++|++.++++|+||+| +|++. +|.+ +++++|+++| + |
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~gg~~v~~p~G-~y~~~~~~~~~~g~l~~-----~~~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAAGGGTVYLPAG-EYRVSAAGEPGDGCLML-----KDGVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHTTSEEEEECSE-EEEECCCSSGGGCSEEC-----CTTEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhcCCCEEEECCe-EEEEcccccCCcccEEe-----cCCeEEEEcCCCCcEE
Confidence 68999999999999999999999999999888999999999 78874 6776 7899999985 4 4
Q ss_pred EcCCCCcccCCCc-----eeeEEEecccCeeeeec-----eEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCC
Q 015319 177 IAPTGSKDWGKGL-----LWWLDFTKLKGITIQGK-----GIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPP 246 (409)
Q Consensus 177 ~~~~~~~~~~~g~-----~~~i~~~~~~nVtI~G~-----G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 246 (409)
++.++...+..+. ..-..+..++|++|.|. |++|| ||.... +
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~---~--------------------- 127 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYI---P--------------------- 127 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSC---T---------------------
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccC---c---------------------
Confidence 5555443321110 00013457889999997 88887 886520 0
Q ss_pred CCccccccCCCCCCCceeEEEEeeeeEEEeceEEecCCCCeEEeecCc-cEEEEeEEEeCCC------------------
Q 015319 247 TPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCI-GVVVHDVSVSSPG------------------ 307 (409)
Q Consensus 247 ~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~-nV~I~n~~I~s~~------------------ 307 (409)
. .+..|++++|+++++++++.|++++..|. +++++|+.+....
T Consensus 128 ----------~--------~~~~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~ 189 (377)
T 2pyg_A 128 ----------G--------GDGADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNV 189 (377)
T ss_dssp ----------T--------SSCCEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCE
T ss_pred ----------c--------ccccccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcE
Confidence 0 11368899999999999999999888775 5677777663310
Q ss_pred -CCCCCCceeecC-cccEEEEeeEEeeCCCeEEeC-------CCceeEEEEEEEEcC--CCeeEEEecCCCCCCCcEEEE
Q 015319 308 -DSPNTDGIHLQN-SKDVLIHTSNLACGDDCVSIQ-------TGCSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNI 376 (409)
Q Consensus 308 -~~~n~DGI~l~~-s~nV~I~n~~i~~gDD~Iai~-------sg~~nV~I~n~~~~~--g~GisIGs~g~~~~~~~v~nI 376 (409)
...++|||++.. |++++|++|.+...++|+++. ..+++++|++|++.+ .+|+.+.. ++++
T Consensus 190 ~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~---------~~~v 260 (377)
T 2pyg_A 190 AYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKM---------TSDI 260 (377)
T ss_dssp EESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEE---------EEEE
T ss_pred EEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEecc---------ccCe
Confidence 013567777655 677777777777666666662 346777777777665 45666532 7899
Q ss_pred EEEeEEEecc-cceEEEEe
Q 015319 377 TVRDVMMHNT-MNGVRIKT 394 (409)
Q Consensus 377 ~v~n~~~~~~-~~Gi~Ikt 394 (409)
+|+||+|.++ ..||+|+.
T Consensus 261 ~i~~N~i~~~~~~GI~i~g 279 (377)
T 2pyg_A 261 TLQNADIHGNGSSGVRVYG 279 (377)
T ss_dssp EEESCEEESCSSCSEEEEE
T ss_pred EEECCEEECCCCceEEEec
Confidence 9999999988 79999984
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.88 E-value=4.1e-22 Score=212.15 Aligned_cols=221 Identities=19% Similarity=0.255 Sum_probs=161.3
Q ss_pred CCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCC---------cEEEECCceEEEe-CCcccCCCccccceEEEecc-
Q 015319 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEA---------SIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG- 174 (409)
Q Consensus 106 ~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg---------~~v~vP~G~~y~~-~~i~l~g~~~~s~~~l~l~G- 174 (409)
....+||+||||+|||++|||+|||+||++|.+.|+ ++||||+| +|++ ++|.+ .+++.|..++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l-----~~~t~L~G~~~ 119 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV-----LYQTQLIGDAK 119 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC-----CTTEEEEECSS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCc-eEEEcccEEc-----cCCeEEEecCC
Confidence 346789999999999999999999999998766544 59999999 6765 68988 6899999985
Q ss_pred ---eEEcCCCCcccCCCceeeEEEecccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccc
Q 015319 175 ---TIIAPTGSKDWGKGLLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRS 251 (409)
Q Consensus 175 ---tl~~~~~~~~~~~g~~~~i~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (409)
+|++..++.. ..+ |.+ ..++++|..||..
T Consensus 120 ~~pvIka~~~F~G-----~~l----------i~~-d~y~~~G~~w~~~-------------------------------- 151 (758)
T 3eqn_A 120 NLPTLLAAPNFSG-----IAL----------IDA-DPYLAGGAQYYVN-------------------------------- 151 (758)
T ss_dssp SCCEEEECTTCCS-----SCS----------EES-SCBCGGGCBSSCG--------------------------------
T ss_pred CCCeEecCCCCCC-----cce----------eec-cccCCCCcccccc--------------------------------
Confidence 6777555421 111 333 3455677777733
Q ss_pred cccCCCCCCCceeEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCC-CCCCceeecCcccEEEEeeEE
Q 015319 252 ELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDS-PNTDGIHLQNSKDVLIHTSNL 330 (409)
Q Consensus 252 ~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~-~n~DGI~l~~s~nV~I~n~~i 330 (409)
+...++.++|++|+ ++..+....+|++..|+++.|+||.|..+..+ ...+||++++++++.|+|++|
T Consensus 152 -----------~~~F~r~irNlviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f 219 (758)
T 3eqn_A 152 -----------QNNFFRSVRNFVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVF 219 (758)
T ss_dssp -----------GGCCCEEEEEEEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEE
T ss_pred -----------ccceeeeecceEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEE
Confidence 12345688899998 66666667889999999999999999997554 459999999999999999999
Q ss_pred eeCCCeEEeCCC---ceeEEEEEEE-----------------EcC-CCeeEEEecCCCC-CCCcEEEEEEEeEEEecccc
Q 015319 331 ACGDDCVSIQTG---CSNVYVHNVN-----------------CGP-GHGISIGSLGKDN-TKACVSNITVRDVMMHNTMN 388 (409)
Q Consensus 331 ~~gDD~Iai~sg---~~nV~I~n~~-----------------~~~-g~GisIGs~g~~~-~~~~v~nI~v~n~~~~~~~~ 388 (409)
..|+-++.++.. .+|++|+||. |.+ .-||.+-+.+... ....+-.|++.|.++.|+..
T Consensus 220 ~GG~~G~~~gnQQfT~rnltF~~~~taI~~~w~wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~ 299 (758)
T 3eqn_A 220 NGGNIGATFGNQQFTVRNLTFNNANTAINAIWNWGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQT 299 (758)
T ss_dssp ESCSEEEEEECSCCEEEEEEEESCSEEEEEEEBSCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSE
T ss_pred eCCceEEEcCCcceEEeccEEeChHHHHhhhcCceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccc
Confidence 999999988653 5677666662 222 1244443321100 12346688888888888765
Q ss_pred eEEE
Q 015319 389 GVRI 392 (409)
Q Consensus 389 Gi~I 392 (409)
+|..
T Consensus 300 ~i~t 303 (758)
T 3eqn_A 300 FVRW 303 (758)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 5543
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.72 E-value=1.1e-16 Score=164.63 Aligned_cols=138 Identities=15% Similarity=0.194 Sum_probs=116.3
Q ss_pred eEEEEeeeeEEEeceEEecC--CCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecC------------cccEEEEeeE
Q 015319 264 ALRFYGSFNVTVTGITIQNS--PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------------SKDVLIHTSN 329 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns--~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~------------s~nV~I~n~~ 329 (409)
.+++..|+|++|++++|.+. ...+|++..|++|+|+||+|.+ .+|+|.+.+ |+||+|+||+
T Consensus 215 ~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~ 289 (448)
T 3jur_A 215 CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT-----GDDSVVIKSGRDADGRRIGVPSEYILVRDNL 289 (448)
T ss_dssp SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE-----SSEEEEEBCCCHHHHHHHCCCEEEEEEESCE
T ss_pred eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe-----CCCcEEeccCccccccccCCCceeEEEEEeE
Confidence 57889999999999999985 2446999999999999999998 567777753 7999999999
Q ss_pred E--eeCCCeEEeCCC----ceeEEEEEEEEcCC-CeeEEEecCCCCCCCcEEEEEEEeEEEecccceE-EEEeecC----
Q 015319 330 L--ACGDDCVSIQTG----CSNVYVHNVNCGPG-HGISIGSLGKDNTKACVSNITVRDVMMHNTMNGV-RIKTWQV---- 397 (409)
Q Consensus 330 i--~~gDD~Iai~sg----~~nV~I~n~~~~~g-~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi-~Ikt~~G---- 397 (409)
+ ..+..||+|++. ++||+|+||+|.+. +|+.|++... .++.|+||+|+|++|.+..+++ .|+.+.+
T Consensus 290 ~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~ 367 (448)
T 3jur_A 290 VISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEG 367 (448)
T ss_dssp EECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCC
T ss_pred EecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCC
Confidence 9 455569999874 69999999999884 7999998642 4578999999999999999988 9988654
Q ss_pred -CCCeEEEEEeC
Q 015319 398 -MIPSGTQCYNS 408 (409)
Q Consensus 398 -~~g~v~~~~~~ 408 (409)
..+.++||+.+
T Consensus 368 ~~~~~i~nI~~~ 379 (448)
T 3jur_A 368 EYLPVVRSVFVK 379 (448)
T ss_dssp SCCCEEEEEEEE
T ss_pred CCCceEEEEEEE
Confidence 45688998764
No 21
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.69 E-value=2.2e-15 Score=151.70 Aligned_cols=187 Identities=18% Similarity=0.224 Sum_probs=145.5
Q ss_pred ccceEEEecceEEcCCCC------cccCCC------------ceeeEEEecccCeeeeeceEEeCCCcccccCCCCCCCC
Q 015319 165 QANIIFQLDGTIIAPTGS------KDWGKG------------LLWWLDFTKLKGITIQGKGIIDGRGSVWWQDYPYDDPI 226 (409)
Q Consensus 165 ~s~~~l~l~Gtl~~~~~~------~~~~~g------------~~~~i~~~~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~ 226 (409)
.++++|...|+|-..... ..|+.. .-.+|.|.+++|+.|+|-=+.+..
T Consensus 108 ~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp-------------- 173 (376)
T 1bhe_A 108 TTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP-------------- 173 (376)
T ss_dssp CBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS--------------
T ss_pred CEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC--------------
Confidence 478888888888765431 234321 124688999999999983222211
Q ss_pred CccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEeeeeEEEeceEEecCC----CCeEEeecCccEEEEeEE
Q 015319 227 DDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSP----QCHLKFDNCIGVVVHDVS 302 (409)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~----~~~i~~~~~~nV~I~n~~ 302 (409)
-..+.+.+|+|++|++++|.+.. ..+|++.+|++|+|+||+
T Consensus 174 -----------------------------------~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~ 218 (376)
T 1bhe_A 174 -----------------------------------NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSN 218 (376)
T ss_dssp -----------------------------------SCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCE
T ss_pred -----------------------------------cEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCE
Confidence 02467889999999999999853 346999999999999999
Q ss_pred EeCCCCCCCCCceeec------CcccEEEEeeEEeeCCCeEEeCC---CceeEEEEEEEEcC-CCeeEEEecCCCCCCCc
Q 015319 303 VSSPGDSPNTDGIHLQ------NSKDVLIHTSNLACGDDCVSIQT---GCSNVYVHNVNCGP-GHGISIGSLGKDNTKAC 372 (409)
Q Consensus 303 I~s~~~~~n~DGI~l~------~s~nV~I~n~~i~~gDD~Iai~s---g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~ 372 (409)
|.+ .+|+|.+. .|+||+|+||++..+ .+|+|++ +.+||+|+||++.+ .+|+.|.+.- ...+.
T Consensus 219 i~~-----gDDcIaiks~~~~~~s~nI~I~n~~~~~g-hGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~ 290 (376)
T 1bhe_A 219 IAT-----GDDNVAIKAYKGRAETRNISILHNDFGTG-HGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGV 290 (376)
T ss_dssp EEC-----SSCSEEEEECTTSCCEEEEEEEEEEECSS-SCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCE
T ss_pred Eec-----CCCeEEEcccCCCCCceEEEEEeeEEEcc-ccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCce
Confidence 998 68999998 599999999999876 5699975 68999999999998 4699999752 25678
Q ss_pred EEEEEEEeEEEecccceEEEEeecCC-----CCeEEEEEeC
Q 015319 373 VSNITVRDVMMHNTMNGVRIKTWQVM-----IPSGTQCYNS 408 (409)
Q Consensus 373 v~nI~v~n~~~~~~~~Gi~Ikt~~G~-----~g~v~~~~~~ 408 (409)
|+||+|+|++|.+..++|.|...... .+.++||+.+
T Consensus 291 v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i~ni~~~ 331 (376)
T 1bhe_A 291 VNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDWSDITFK 331 (376)
T ss_dssp EEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEEEEEEEE
T ss_pred EeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEEEEEEEE
Confidence 99999999999999999999864421 3567887753
No 22
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.68 E-value=2.3e-15 Score=149.71 Aligned_cols=137 Identities=18% Similarity=0.227 Sum_probs=116.5
Q ss_pred eEEEEeeeeEEEeceEEecCC--------CCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNSP--------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD 335 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~--------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD 335 (409)
.+.+..|+|++|++++|.++. ..++++..|++|+|+|++|.+ .+|+|.+.+++||+|+||++..++
T Consensus 125 ~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh- 198 (339)
T 2iq7_A 125 AFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGGH- 198 (339)
T ss_dssp CEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-
T ss_pred eEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECCc-
Confidence 588899999999999999753 335999999999999999998 789999999999999999999885
Q ss_pred eEEeCC-------CceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEecccc-eEEEEeec---------C
Q 015319 336 CVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-GVRIKTWQ---------V 397 (409)
Q Consensus 336 ~Iai~s-------g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~-Gi~Ikt~~---------G 397 (409)
+|+|++ +++||+|+||++.+ .+|+.|.+.. +..+.|+||+|+|++|.+..+ +|.|.... +
T Consensus 199 GisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~ 276 (339)
T 2iq7_A 199 GLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVS--GATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPT 276 (339)
T ss_dssp CEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCC
T ss_pred eEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC--CCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCC
Confidence 799976 27999999999988 5699999863 245789999999999999876 99998642 2
Q ss_pred CCCeEEEEEeC
Q 015319 398 MIPSGTQCYNS 408 (409)
Q Consensus 398 ~~g~v~~~~~~ 408 (409)
....++||+.+
T Consensus 277 ~~~~i~ni~~~ 287 (339)
T 2iq7_A 277 NGVPITGLTLS 287 (339)
T ss_dssp SSSCEEEEEEE
T ss_pred CCceEEEEEEE
Confidence 23578888753
No 23
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.65 E-value=2.9e-15 Score=159.64 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=110.8
Q ss_pred eEEEEeeeeEEEeceEEecC--C-CCeEEeecCccEEEEeEEEeCCCC------CCCCCceeecCcccEEEEeeEEeeCC
Q 015319 264 ALRFYGSFNVTVTGITIQNS--P-QCHLKFDNCIGVVVHDVSVSSPGD------SPNTDGIHLQNSKDVLIHTSNLACGD 334 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns--~-~~~i~~~~~~nV~I~n~~I~s~~~------~~n~DGI~l~~s~nV~I~n~~i~~gD 334 (409)
.+.+.+|+|++|+++++.+. + ..+|++.+|++|+|+||+|.+.++ +.+.||++...|+||+|+||++..++
T Consensus 356 ~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh 435 (608)
T 2uvf_A 356 GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH 435 (608)
T ss_dssp SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS
T ss_pred EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC
Confidence 57889999999999998752 2 346999999999999999998543 23455555556899999999999999
Q ss_pred CeEEeCC----CceeEEEEEEEEcCC-CeeEEEecCCCCCCCcEEEEEEEeEEEecc-cceEEEEeecC
Q 015319 335 DCVSIQT----GCSNVYVHNVNCGPG-HGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRIKTWQV 397 (409)
Q Consensus 335 D~Iai~s----g~~nV~I~n~~~~~g-~GisIGs~g~~~~~~~v~nI~v~n~~~~~~-~~Gi~Ikt~~G 397 (409)
+++++++ +++||+|+||+|.+. +||.|++... .++.|+||+|+|++|.+. .++|.|+.+.+
T Consensus 436 g~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~ 502 (608)
T 2uvf_A 436 GAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYA 502 (608)
T ss_dssp CSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETT--TCCEEEEEEEEEEEEEEESSEEEEEEEECC
T ss_pred CeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecC--CCceEECcEEEeeEEEccccccEEEEeccC
Confidence 9988887 469999999999985 7999998642 457799999999999999 59999998765
No 24
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.64 E-value=1e-14 Score=144.94 Aligned_cols=137 Identities=18% Similarity=0.209 Sum_probs=116.1
Q ss_pred eEEEEeeeeEEEeceEEecCC--------CCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNSP--------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD 335 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~--------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD 335 (409)
.+.+..|+|++|++++|.++. ..+|++..|++|+|+|++|.+ .+|+|.+.+++||+|+||++..+.
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh- 202 (339)
T 1ia5_A 129 VFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-----QDDCVAVNSGENIYFSGGYCSGGH- 202 (339)
T ss_dssp CEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSS-
T ss_pred eEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-----CCCeEEEeCCeEEEEEeEEEECCc-
Confidence 578899999999999999752 345999999999999999998 789999999999999999999874
Q ss_pred eEEeCC-------CceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEecccc-eEEEEeecC-------CC
Q 015319 336 CVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-GVRIKTWQV-------MI 399 (409)
Q Consensus 336 ~Iai~s-------g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~-Gi~Ikt~~G-------~~ 399 (409)
+|+|++ +.+||+|+||++.+ .+|+.|.+.. +..+.|+||+|+|++|.+..+ +|.|....+ ..
T Consensus 203 GisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~~ 280 (339)
T 1ia5_A 203 GLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNI--DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTG 280 (339)
T ss_dssp CEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCSS
T ss_pred eEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC--CCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcCC
Confidence 799966 27999999999998 5699998853 245789999999999999876 999987532 23
Q ss_pred CeEEEEEeC
Q 015319 400 PSGTQCYNS 408 (409)
Q Consensus 400 g~v~~~~~~ 408 (409)
..++||..+
T Consensus 281 ~~i~ni~~~ 289 (339)
T 1ia5_A 281 VPITDFVLD 289 (339)
T ss_dssp SCEEEEEEE
T ss_pred ceEEEEEEE
Confidence 567877653
No 25
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.63 E-value=2.7e-14 Score=142.47 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=115.0
Q ss_pred eEEEEeeeeEEEeceEEecCC----------------CCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEe
Q 015319 264 ALRFYGSFNVTVTGITIQNSP----------------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHT 327 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~----------------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n 327 (409)
.+.+.+|+|++|++++|.+++ ..+|++..|++|+|+|++|.+ .+|+|.+.+++||+|+|
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n 203 (349)
T 1hg8_A 129 CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSN 203 (349)
T ss_dssp EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEE
T ss_pred eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEe
Confidence 688999999999999999752 335999999999999999998 78999999999999999
Q ss_pred eEEeeCCCeEEeCC-------CceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEeccc-ceEEEEeecC-
Q 015319 328 SNLACGDDCVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRIKTWQV- 397 (409)
Q Consensus 328 ~~i~~gDD~Iai~s-------g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~-~Gi~Ikt~~G- 397 (409)
|++..+. +|+|++ +++||+|+||++.+ .+|+.|.+.. +..+.|+||+|+|++|.+.. ++|.|.....
T Consensus 204 ~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~ 280 (349)
T 1hg8_A 204 MYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS--GATGTINNVTYQNIALTNISTYGVDVQQDYLN 280 (349)
T ss_dssp EEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET--TCCEEEEEEEEEEEEEEEEEEEEEEEEEEECS
T ss_pred EEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC--CCCccccceEEEEEEEEccccccEEEEeeccC
Confidence 9999875 699965 28999999999998 5799999863 24577999999999999986 7999987532
Q ss_pred --------CCCeEEEEEe
Q 015319 398 --------MIPSGTQCYN 407 (409)
Q Consensus 398 --------~~g~v~~~~~ 407 (409)
....++||..
T Consensus 281 ~~~~~~p~~~~~i~~I~~ 298 (349)
T 1hg8_A 281 GGPTGKPTNGVKISNIKF 298 (349)
T ss_dssp SSBCSCCCSSEEEEEEEE
T ss_pred CCCCCcccCCceEEEEEE
Confidence 1246777765
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.63 E-value=2.1e-14 Score=142.63 Aligned_cols=135 Identities=19% Similarity=0.252 Sum_probs=114.2
Q ss_pred eEEEEeeeeEEEeceEEecCC--------CCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNSP--------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD 335 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~--------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD 335 (409)
.+.+. |+|++|++++|.+.. ..+|++..|++|+|+|++|.+ .+|+|.+.+++||+|+||++..+.
T Consensus 125 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh- 197 (336)
T 1nhc_A 125 AISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGGH- 197 (336)
T ss_dssp CEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESSS-
T ss_pred EEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECCc-
Confidence 57888 999999999999863 345999999999999999998 789999999999999999999874
Q ss_pred eEEeCC-------CceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEecccc-eEEEEeecC---------
Q 015319 336 CVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-GVRIKTWQV--------- 397 (409)
Q Consensus 336 ~Iai~s-------g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~-Gi~Ikt~~G--------- 397 (409)
+|+|++ +.+||+|+||++.+ .+|+.|.+.. +..+.|+||+|+|++|.+..+ +|.|.....
T Consensus 198 GisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~ 275 (336)
T 1nhc_A 198 GLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIY--KETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPS 275 (336)
T ss_dssp EEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCC
T ss_pred CceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEEC--CCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCC
Confidence 799976 27999999999988 5699999852 245789999999999999876 999976421
Q ss_pred CCCeEEEEEe
Q 015319 398 MIPSGTQCYN 407 (409)
Q Consensus 398 ~~g~v~~~~~ 407 (409)
....++||..
T Consensus 276 ~~~~i~~i~~ 285 (336)
T 1nhc_A 276 TGIPITDVTV 285 (336)
T ss_dssp SSSCEEEEEE
T ss_pred CCceEEEEEE
Confidence 2356777765
No 27
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.59 E-value=5.2e-14 Score=141.10 Aligned_cols=135 Identities=19% Similarity=0.233 Sum_probs=113.4
Q ss_pred eEEEEeeeeEEEeceEEecCC--------CCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNSP--------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD 335 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~--------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD 335 (409)
.+.+. |+||+|++++|.++. ..++++..|+||+|+|++|.+ .+|+|.+.+++||+|+||++..+.
T Consensus 151 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh- 223 (362)
T 1czf_A 151 AFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-----QDDCLAVNSGENIWFTGGTCIGGH- 223 (362)
T ss_dssp CEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-
T ss_pred EEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEec-----CCCEEEEeCCeEEEEEEEEEeCCc-
Confidence 47889 999999999999742 345999999999999999999 789999999999999999999874
Q ss_pred eEEeCC-------CceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEeccc-ceEEEEeec---------C
Q 015319 336 CVSIQT-------GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM-NGVRIKTWQ---------V 397 (409)
Q Consensus 336 ~Iai~s-------g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~-~Gi~Ikt~~---------G 397 (409)
+|+|++ +.+||+|+||++.+ .+|+.|.+.. +..+.|+||+|+|++|.+.. ++|.|.... .
T Consensus 224 GisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 224 GLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTIS--GATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp CEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEET--TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred eeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeC--CCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 799966 27999999999998 5699998752 24578999999999999986 799997542 1
Q ss_pred CCCeEEEEEe
Q 015319 398 MIPSGTQCYN 407 (409)
Q Consensus 398 ~~g~v~~~~~ 407 (409)
....++||..
T Consensus 302 ~~~~i~nI~~ 311 (362)
T 1czf_A 302 NGVTIQDVKL 311 (362)
T ss_dssp SSEEEEEEEE
T ss_pred CCceEEEEEE
Confidence 2356777765
No 28
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.58 E-value=8.4e-14 Score=146.69 Aligned_cols=200 Identities=12% Similarity=0.140 Sum_probs=145.8
Q ss_pred cE-EEECCceEEEeCCcccCCCccccceEEEecceEEcCCCCcccCC--------------C--ceeeEEEecccCeeee
Q 015319 142 SI-MVVPAESVFLVGPMSFSGPYCQANIIFQLDGTIIAPTGSKDWGK--------------G--LLWWLDFTKLKGITIQ 204 (409)
Q Consensus 142 ~~-v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~Gtl~~~~~~~~~~~--------------g--~~~~i~~~~~~nVtI~ 204 (409)
-+ +++++| .++.+.+.|.+ ..+++|...|+|-.... .|.. . ..+++.+.+++||.|+
T Consensus 265 vt~L~L~~G-A~l~g~i~~~~---~~nv~ItG~GtIDG~G~--~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~ 338 (574)
T 1ogo_X 265 TYWVYLAPG-AYVKGAIEYFT---KQNFYATGHGILSGENY--VYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCV 338 (574)
T ss_dssp CCEEEECTT-EEEESCEEECC---SSCEEEESSCEEECTTS--CTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEE
T ss_pred CceEEecCC-cEEEccEEEeC---ceeEEEEeCEEEeCCCc--ccccccccccccccCCcceEEEEeccccCCceeEEEE
Confidence 45 888888 77788888876 57999988898865421 1210 0 0112223489999999
Q ss_pred eceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEeeeeE--EEeceEEec
Q 015319 205 GKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYGSFNV--TVTGITIQN 282 (409)
Q Consensus 205 G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~~~nv--~I~gvti~n 282 (409)
|-.+.+.. .| .+++..|+|| +|+++++.+
T Consensus 339 Giti~NSp---~w----------------------------------------------~i~~~~c~nV~~~I~nv~i~~ 369 (574)
T 1ogo_X 339 GPTINAPP---FN----------------------------------------------TMDFNGNSGISSQISDYKQVG 369 (574)
T ss_dssp SCEEECCS---SC----------------------------------------------SEEECSSSCEEEEEEEEEEEC
T ss_pred CeEEECCC---Cc----------------------------------------------EEeecCCCChhhEEEeeEeeC
Confidence 96666532 12 3667889999 999999987
Q ss_pred CCCC---eEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCC-e-EEeCC---CceeEEEEEEEEc
Q 015319 283 SPQC---HLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD-C-VSIQT---GCSNVYVHNVNCG 354 (409)
Q Consensus 283 s~~~---~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD-~-Iai~s---g~~nV~I~n~~~~ 354 (409)
++.+ +|++. +||+|+||+|.+ .+|+|.+.+ +||+|+||++.++.. + |++++ .++||+|+||++.
T Consensus 370 ~~~~nTDGIDi~--~NV~I~nc~I~~-----gDDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 370 AFFFQTDGPEIY--PNSVVHDVFWHV-----NDDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVI 441 (574)
T ss_dssp CCSTTCCCCBCC--TTCEEEEEEEEE-----SSCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEE
T ss_pred CCCCCCccCccc--CCEEEEeeEEEC-----CCCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEE
Confidence 6544 58887 999999999999 789999986 999999999998753 5 89985 4899999999997
Q ss_pred CCC---------eeEEEecCCCC------CCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEEeC
Q 015319 355 PGH---------GISIGSLGKDN------TKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCYNS 408 (409)
Q Consensus 355 ~g~---------GisIGs~g~~~------~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~~~ 408 (409)
+.. |..||++.-+. .+..| ||+|+|++|.+..+++ |+.++ .+.++||+.+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEE
Confidence 643 44455543221 11128 9999999999998886 66554 3468887753
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.54 E-value=2.9e-13 Score=138.31 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=114.0
Q ss_pred eEEEEeeeeEEEeceEEecC---CCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecC-cccEEEEeeEEeeCCCeEEe
Q 015319 264 ALRFYGSFNVTVTGITIQNS---PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN-SKDVLIHTSNLACGDDCVSI 339 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns---~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~-s~nV~I~n~~i~~gDD~Iai 339 (409)
.+.+..|+||+|++++|.+. ...+|++.. ++|+|+||+|.+ .+|||.+.+ ++||+|+||++..+ .+|+|
T Consensus 152 ~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~-~GisI 224 (422)
T 1rmg_A 152 HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTN-----KDECVTVKSPANNILVESIYCNWS-GGCAM 224 (422)
T ss_dssp SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEES-----SSEEEEEEEEEEEEEEEEEEEESS-SEEEE
T ss_pred EEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeC-----CCCeEEeCCCCcCEEEEeEEEcCC-cceee
Confidence 57889999999999999972 245699999 999999999998 689999987 99999999998877 49999
Q ss_pred CC-----CceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecC-------CCCeEEEEE
Q 015319 340 QT-----GCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQV-------MIPSGTQCY 406 (409)
Q Consensus 340 ~s-----g~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G-------~~g~v~~~~ 406 (409)
++ +.+||+|+||++.+ .+||.|.+.+ ..+.++||+|+|++|.+..++|.|..+.+ ....++||.
T Consensus 225 GS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~---g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~ 301 (422)
T 1rmg_A 225 GSLGADTDVTDIVYRNVYTWSSNQMYMIKSNG---GSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNIT 301 (422)
T ss_dssp EEECTTEEEEEEEEEEEEEESSSCSEEEEEBB---CCEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEE
T ss_pred cccCCCCcEEEEEEEeEEEeccceEEEEEecC---CCcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEE
Confidence 65 27999999999988 5799999753 23589999999999999999999986532 345777776
Q ss_pred eC
Q 015319 407 NS 408 (409)
Q Consensus 407 ~~ 408 (409)
.+
T Consensus 302 ~~ 303 (422)
T 1rmg_A 302 VK 303 (422)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 30
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.53 E-value=2.7e-13 Score=134.49 Aligned_cols=136 Identities=18% Similarity=0.196 Sum_probs=114.4
Q ss_pred eEEEEeeee-EEEeceEEecCC---------CCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeC
Q 015319 264 ALRFYGSFN-VTVTGITIQNSP---------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG 333 (409)
Q Consensus 264 ~i~~~~~~n-v~I~gvti~ns~---------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~g 333 (409)
.+.+..|+| |+|++++|.++. ..++++ .|+||+|+||+|.+ .+|+|.+.+++||+|+||++..+
T Consensus 121 ~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~g 194 (335)
T 1k5c_A 121 AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKN-----QDDCIAINDGNNIRFENNQCSGG 194 (335)
T ss_dssp CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEES-----SSCSEEEEEEEEEEEESCEEESS
T ss_pred eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEc-----CCCEEEeeCCeeEEEEEEEEECC
Confidence 588999999 999999999852 235999 99999999999999 78999999999999999999987
Q ss_pred CCeEEeCC-----CceeEEEEEEEEcC-CCeeEEEecCCCCCC-CcEEEEEEEeEEEeccc-ceEEEEeecC-------C
Q 015319 334 DDCVSIQT-----GCSNVYVHNVNCGP-GHGISIGSLGKDNTK-ACVSNITVRDVMMHNTM-NGVRIKTWQV-------M 398 (409)
Q Consensus 334 DD~Iai~s-----g~~nV~I~n~~~~~-g~GisIGs~g~~~~~-~~v~nI~v~n~~~~~~~-~Gi~Ikt~~G-------~ 398 (409)
.+|+|++ +.+||+|+||++.+ ..|+.|.+.. +.. +.|+||+|+|++|.+.. ++|.|....+ .
T Consensus 195 -hGisIGS~g~~~~v~nV~v~n~~~~~t~~girIKt~~--g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~ 271 (335)
T 1k5c_A 195 -HGISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQR--TATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGT 271 (335)
T ss_dssp -CCEEEEEECTTCEEEEEEEESCEEEEEEEEEEEEEET--TCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCS
T ss_pred -ccCeEeeccCCCCEEEEEEEeeEEECCCceEEEEEeC--CCCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCC
Confidence 4698864 37999999999998 5699999763 234 67999999999999986 7999987432 2
Q ss_pred CCeEEEEEeC
Q 015319 399 IPSGTQCYNS 408 (409)
Q Consensus 399 ~g~v~~~~~~ 408 (409)
...++||..+
T Consensus 272 ~~~i~nI~~~ 281 (335)
T 1k5c_A 272 GAPFSDVNFT 281 (335)
T ss_dssp SSCEEEEEEC
T ss_pred CceEEEEEEE
Confidence 3578888764
No 31
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.52 E-value=9.6e-14 Score=139.11 Aligned_cols=206 Identities=14% Similarity=0.160 Sum_probs=122.2
Q ss_pred CCCceEEEeec----cccCCCCCccHHHHHHHHHHHhh-------cCCcEEEECCceEEE-eCCcccCCCccccceEEEe
Q 015319 105 HHSSVFNVKDF----GAKGNGVSDDTKAFEAAWAAACK-------VEASIMVVPAESVFL-VGPMSFSGPYCQANIIFQL 172 (409)
Q Consensus 105 ~~~~~~~V~d~----GA~gdg~tDdT~Aiq~Ai~~a~~-------~gg~~v~vP~G~~y~-~~~i~l~g~~~~s~~~l~l 172 (409)
+....|+|++| +|+||+.+|+.++|+++|+++.+ ..|.+|+||+| +|. -+++.+. ++.++|..
T Consensus 10 ~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId----kp~LtL~G 84 (410)
T 2inu_A 10 NSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD----VSYLTIAG 84 (410)
T ss_dssp --CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC----CTTEEEEC
T ss_pred ccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe----cCcEEEEe
Confidence 35679999999 89999999999999999999886 45899999999 665 5888874 45578877
Q ss_pred cc--e----EEcCCCCcc----cCCCce----------eeEEEec-----ccCeeeeeceEEeCCCcccccCCCCCCCCC
Q 015319 173 DG--T----IIAPTGSKD----WGKGLL----------WWLDFTK-----LKGITIQGKGIIDGRGSVWWQDYPYDDPID 227 (409)
Q Consensus 173 ~G--t----l~~~~~~~~----~~~g~~----------~~i~~~~-----~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~ 227 (409)
++ . |..-..... |+++.. .-|.++. +++|+|.| =+|+|---.-|..
T Consensus 85 ~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~-------- 155 (410)
T 2inu_A 85 FGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKN-------- 155 (410)
T ss_dssp SCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTT--------
T ss_pred cCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCC--------
Confidence 53 2 331101112 333321 1122211 25566555 3444441100100
Q ss_pred ccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEEe-eeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCC
Q 015319 228 DESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFYG-SFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSP 306 (409)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~~-~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~ 306 (409)
.....-.+|.+.. +++++|+++.|.+. .++|.+..+++.+|+++.|...
T Consensus 156 -----------------------------s~~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e~ 205 (410)
T 2inu_A 156 -----------------------------SYHNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAEC 205 (410)
T ss_dssp -----------------------------SCCCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEESS
T ss_pred -----------------------------CcccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEec
Confidence 0001234666654 77788888888875 7788888888888888888741
Q ss_pred C------------------CCCCCCc--eeecCcccEEEEeeEE-eeCCCeEEeCCCceeEEEEEEEEcC
Q 015319 307 G------------------DSPNTDG--IHLQNSKDVLIHTSNL-ACGDDCVSIQTGCSNVYVHNVNCGP 355 (409)
Q Consensus 307 ~------------------~~~n~DG--I~l~~s~nV~I~n~~i-~~gDD~Iai~sg~~nV~I~n~~~~~ 355 (409)
+ .....|| |.++.+.+.+|+++.+ ..+.|+|.+.. +.+..|+++.+..
T Consensus 206 GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh~m~-s~~~~i~~N~f~~ 274 (410)
T 2inu_A 206 GNCVELTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNLFPRGRSLIEFTG-CNRCSVTSNRLQG 274 (410)
T ss_dssp SEEEEECSCEESCEEESCEEECCTTSEEEEEESEESCEEESCEECSCSSEEEEEES-CBSCEEESCEEEE
T ss_pred CCceeeccccccceEecceeeecCCCCEEEEEeCCCCEEECCCcccCcceEEEEEc-cCCCEEECCEEec
Confidence 0 0112233 5555555555555544 33555555544 3444555555554
No 32
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.52 E-value=6.4e-13 Score=139.70 Aligned_cols=207 Identities=14% Similarity=0.120 Sum_probs=144.4
Q ss_pred CcE-EEECCceEEEeCCcccC-CCccccceEEEecceEEcCCCC------cccCC-------C--ceeeEEEecccCeee
Q 015319 141 ASI-MVVPAESVFLVGPMSFS-GPYCQANIIFQLDGTIIAPTGS------KDWGK-------G--LLWWLDFTKLKGITI 203 (409)
Q Consensus 141 g~~-v~vP~G~~y~~~~i~l~-g~~~~s~~~l~l~Gtl~~~~~~------~~~~~-------g--~~~~i~~~~~~nVtI 203 (409)
+.+ +++++| .++.+++.|. + ..+++|...|+|-..... ..|.. . +.+++.+.+++||.|
T Consensus 222 ~~~~L~l~~G-A~L~gs~~~~~~---~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 222 SVTWVYFAPG-AYVKGAVEFLST---ASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp TCCEEEECTT-EEEESCEEECCC---SSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred CCCeEecCCC-CEEEEEEEEecC---ceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 456 999999 7888888776 3 468899888898765421 11210 0 011223388899999
Q ss_pred eeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCCCCCceeEEEE-ee-ee--EEEeceE
Q 015319 204 QGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMPSIKPTALRFY-GS-FN--VTVTGIT 279 (409)
Q Consensus 204 ~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~i~~~-~~-~n--v~I~gvt 279 (409)
+|-.+.+.. +| .+++. .| +| ++|++++
T Consensus 298 ~Giti~Nsp---~w----------------------------------------------~i~i~~~~~~ni~V~I~n~~ 328 (549)
T 1x0c_A 298 NGVTVSAPP---FN----------------------------------------------SMDWSGNSLDLITCRVDDYK 328 (549)
T ss_dssp ESCEEECCS---SC----------------------------------------------SEEEECSCGGGEEEEEEEEE
T ss_pred ECcEEECCC---ce----------------------------------------------eEEeeccCCCCCeEEEEeeE
Confidence 985544432 22 24444 34 58 9999999
Q ss_pred EecCCCC---eEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCC-Ce-EEeCC---CceeEEEEEE
Q 015319 280 IQNSPQC---HLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGD-DC-VSIQT---GCSNVYVHNV 351 (409)
Q Consensus 280 i~ns~~~---~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gD-D~-Iai~s---g~~nV~I~n~ 351 (409)
+.++..| ++++. +||+|+||+|.+ .+|+|.+.+ +||+|+||++.++. .+ |++++ .++||+|+||
T Consensus 329 i~~~~~~NTDGidi~--~nV~I~n~~i~~-----gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~ 400 (549)
T 1x0c_A 329 QVGAFYGQTDGLEMY--PGTILQDVFYHT-----DDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNV 400 (549)
T ss_dssp EECCCBTTCCCCBCC--TTCEEEEEEEEE-----SSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEE
T ss_pred eEcCCCCCCCccccc--CCEEEEeeEEeC-----CCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEee
Confidence 9875433 57777 999999999999 789999987 99999999998764 45 88875 4899999999
Q ss_pred EEcCCC-------eeEEEecCCC---------CCCCcEEEEEEEeEEEeccc-ceEEEEeecCCCC-eEEEEEeC
Q 015319 352 NCGPGH-------GISIGSLGKD---------NTKACVSNITVRDVMMHNTM-NGVRIKTWQVMIP-SGTQCYNS 408 (409)
Q Consensus 352 ~~~~g~-------GisIGs~g~~---------~~~~~v~nI~v~n~~~~~~~-~Gi~Ikt~~G~~g-~v~~~~~~ 408 (409)
++.+.. |.-|.+...+ ...+.|+||+|+|++|++.. +|+.+....|..+ .++||+.+
T Consensus 401 ~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~ 475 (549)
T 1x0c_A 401 DVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIK 475 (549)
T ss_dssp EEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEE
T ss_pred EEECccccccccceEEEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEE
Confidence 998743 4225542111 12567999999999999876 6665533334333 58888764
No 33
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.05 E-value=3.2e-09 Score=113.53 Aligned_cols=68 Identities=25% Similarity=0.377 Sum_probs=56.6
Q ss_pred CCCCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEe-CCcccCCCccccceEEEecc--eEEcC
Q 015319 104 SHHSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLV-GPMSFSGPYCQANIIFQLDG--TIIAP 179 (409)
Q Consensus 104 ~~~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~-~~i~l~g~~~~s~~~l~l~G--tl~~~ 179 (409)
.+...+++|+||||+|||++|||+|||+||++| .++.+||||+| +|++ ++|.+ .++++|..++ +|.+.
T Consensus 395 ~~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa--~~g~~v~~P~G-~Y~vt~Ti~i-----p~~~~ivG~~~~~I~~~ 465 (758)
T 3eqn_A 395 YAPSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY--AGCKIIFFDAG-TYIVTDTIQI-----PAGTQIVGEVWSVIMGT 465 (758)
T ss_dssp CCGGGEEETTTTTCCCEEEEECHHHHHHHHHHH--TTTSEEECCSE-EEEESSCEEE-----CTTCEEECCSSEEEEEC
T ss_pred ccccceEEeeeccccCCCCchhHHHHHHHHHHh--cCCCEEEECCC-EeEECCeEEc-----CCCCEEEecccceEecC
Confidence 356689999999999999999999999999854 35899999999 5665 67888 5799998875 66653
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.00 E-value=5.2e-09 Score=110.10 Aligned_cols=93 Identities=18% Similarity=0.207 Sum_probs=66.8
Q ss_pred CccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeC-----CCeEEeCCCceeEEEEEEEEcCC-CeeEEEecCC
Q 015319 293 CIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG-----DDCVSIQTGCSNVYVHNVNCGPG-HGISIGSLGK 366 (409)
Q Consensus 293 ~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~g-----DD~Iai~sg~~nV~I~n~~~~~g-~GisIGs~g~ 366 (409)
|+||+|+||+|+. ..+|||.+.+|+||+|+||++... ..+|.|+++.+||+|+||++.+. .||.|...+
T Consensus 182 S~NV~I~Nc~I~~----tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~- 256 (609)
T 3gq8_A 182 SENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG- 256 (609)
T ss_dssp CEEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT-
T ss_pred ceeEEEEeeEEEe----cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC-
Confidence 8888888888865 367888888888888888888432 46788887778888888888874 578887653
Q ss_pred CCCCCcEEEEEEEeEEEeccc--ceEEE
Q 015319 367 DNTKACVSNITVRDVMMHNTM--NGVRI 392 (409)
Q Consensus 367 ~~~~~~v~nI~v~n~~~~~~~--~Gi~I 392 (409)
+...++||+|.|+...+.. +.+++
T Consensus 257 --~~~~v~NV~I~n~vs~~nvrsyn~r~ 282 (609)
T 3gq8_A 257 --DAPAAYNISINGHMSVEDVRSYNFRH 282 (609)
T ss_dssp --TSCCCEEEEEEEEEEESCSEEEEEEE
T ss_pred --CCCccccEEEECCEeecCceEecceE
Confidence 3456788888887555443 34444
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.98 E-value=5.1e-09 Score=112.05 Aligned_cols=85 Identities=19% Similarity=0.210 Sum_probs=60.4
Q ss_pred CccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeC-----CCeEEeCCCceeEEEEEEEEcCC-CeeEEEecCC
Q 015319 293 CIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACG-----DDCVSIQTGCSNVYVHNVNCGPG-HGISIGSLGK 366 (409)
Q Consensus 293 ~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~g-----DD~Iai~sg~~nV~I~n~~~~~g-~GisIGs~g~ 366 (409)
|+||+|+||+|.+ ..+|||.+.+|+||+|+||++... ..+|+|+++.+||+|+||++.+. .||.|.+.+
T Consensus 182 S~NV~I~Nc~I~n----tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~- 256 (772)
T 3gqn_A 182 SENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG- 256 (772)
T ss_dssp CEEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT-
T ss_pred cceEEEEeeEEEe----cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC-
Confidence 7888888888865 356788887788888888887432 45777777778888888887773 577777653
Q ss_pred CCCCCcEEEEEEEeEEEe
Q 015319 367 DNTKACVSNITVRDVMMH 384 (409)
Q Consensus 367 ~~~~~~v~nI~v~n~~~~ 384 (409)
+.+.++||+|.|+...
T Consensus 257 --~gg~v~NV~I~gnis~ 272 (772)
T 3gqn_A 257 --DAPAAYNISINGHMSV 272 (772)
T ss_dssp --TSCCCEEEEEEEEEEE
T ss_pred --CCCccccEEEECCEEe
Confidence 4456778877765444
No 36
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=98.91 E-value=5.8e-08 Score=100.00 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=80.1
Q ss_pred EEeecCccEEEEeEEEeCCCCCCCCCc-eeecCcccEEEEeeEEeeCCCeEEeCCC-----------ceeEEEEEEEEcC
Q 015319 288 LKFDNCIGVVVHDVSVSSPGDSPNTDG-IHLQNSKDVLIHTSNLACGDDCVSIQTG-----------CSNVYVHNVNCGP 355 (409)
Q Consensus 288 i~~~~~~nV~I~n~~I~s~~~~~n~DG-I~l~~s~nV~I~n~~i~~gDD~Iai~sg-----------~~nV~I~n~~~~~ 355 (409)
+++ .|++|+|+|++|.++ .+++| ++...++||+|+||++.. +++|.++++ ++||+|+||++.+
T Consensus 170 i~i-~s~nV~I~n~~I~~g---ddgiGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~n 244 (464)
T 1h80_A 170 RLH-WSRNGIIERIKQNNA---LFGYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSK 244 (464)
T ss_dssp EEE-EEEEEEEEEEEEESC---CTTCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEES
T ss_pred cee-eccCEEEeceEEecC---CCeEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEEC
Confidence 444 899999999999995 35667 677889999999999877 667777654 7999999999998
Q ss_pred C-CeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEE
Q 015319 356 G-HGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIK 393 (409)
Q Consensus 356 g-~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ik 393 (409)
. .+|.|++. ...++||+|+|+++.+...+|.|.
T Consensus 245 v~~~I~I~p~-----~~~isnItfeNI~~t~~~~aI~i~ 278 (464)
T 1h80_A 245 GLAAVMFGPH-----FMKNGDVQVTNVSSVSCGSAVRSD 278 (464)
T ss_dssp SSEEEEEECT-----TCBCCCEEEEEEEEESSSCSEEEC
T ss_pred CceeEEEeCC-----CceEeEEEEEEEEEEccceeEEEe
Confidence 4 57999864 246899999999999999999886
No 37
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.90 E-value=6.4e-08 Score=98.05 Aligned_cols=90 Identities=13% Similarity=0.036 Sum_probs=66.9
Q ss_pred eEEEEeeeeEEEeceEEecCCCCeEEeecCc-cEEEEeEEEeCCCC----CCCCCceeecCc--ccEEEEeeEEe-eCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNCI-GVVVHDVSVSSPGD----SPNTDGIHLQNS--KDVLIHTSNLA-CGDD 335 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~-nV~I~n~~I~s~~~----~~n~DGI~l~~s--~nV~I~n~~i~-~gDD 335 (409)
+|.+.+ .+.+|++++|.+....+|.+.... +.+|++|+|....+ ..+.|||.+..+ .+.+|++|++. +.||
T Consensus 131 GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~dd 209 (400)
T 1ru4_A 131 GAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209 (400)
T ss_dssp SEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSC
T ss_pred cEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCC
Confidence 455555 677899999998877678887644 88888999887543 246789887543 78888888875 4688
Q ss_pred eEEeCCCceeEEEEEEEEc
Q 015319 336 CVSIQTGCSNVYVHNVNCG 354 (409)
Q Consensus 336 ~Iai~sg~~nV~I~n~~~~ 354 (409)
++.+......|+|+||...
T Consensus 210 Gidl~~~~~~v~i~nn~a~ 228 (400)
T 1ru4_A 210 GFDLFDSPQKVVIENSWAF 228 (400)
T ss_dssp SEECTTCCSCCEEESCEEE
T ss_pred cEEEEecCCCEEEEeEEEE
Confidence 8888765567888888774
No 38
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.47 E-value=1.9e-06 Score=85.79 Aligned_cols=122 Identities=9% Similarity=0.109 Sum_probs=97.4
Q ss_pred eeEEEEeeeeEEEeceEEecCCCCeEEeec-CccEEEEeEEEeCCCCCCCCCceee--------cCcccEEEEeeEEee-
Q 015319 263 TALRFYGSFNVTVTGITIQNSPQCHLKFDN-CIGVVVHDVSVSSPGDSPNTDGIHL--------QNSKDVLIHTSNLAC- 332 (409)
Q Consensus 263 ~~i~~~~~~nv~I~gvti~ns~~~~i~~~~-~~nV~I~n~~I~s~~~~~n~DGI~l--------~~s~nV~I~n~~i~~- 332 (409)
..|.+..|.+.+|++.++.+....+|++.. |++++|+++++.. +.||+.+ ..+++++|+++.+..
T Consensus 173 dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n 247 (377)
T 2pyg_A 173 DGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYDN 247 (377)
T ss_dssp CSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEESC
T ss_pred CceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEcC
Confidence 467788999999999877777788899887 9999999999998 6788887 678899999998764
Q ss_pred CCCeEEeCCCceeEEEEEEEEcC--CCeeEEEecCCCCCCCcEEEEEEEeEEEecccc-----eEEEEeecCCC
Q 015319 333 GDDCVSIQTGCSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN-----GVRIKTWQVMI 399 (409)
Q Consensus 333 gDD~Iai~sg~~nV~I~n~~~~~--g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~-----Gi~Ikt~~G~~ 399 (409)
...++.+.. +++++|+||++.. ..||.|.. +++++|+|++|.++.. .+.+..+.+..
T Consensus 248 ~~~Gi~~~~-~~~v~i~~N~i~~~~~~GI~i~g---------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~ 311 (377)
T 2pyg_A 248 AREGVLLKM-TSDITLQNADIHGNGSSGVRVYG---------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTA 311 (377)
T ss_dssp SSCSEEEEE-EEEEEEESCEEESCSSCSEEEEE---------EEEEEEESCEEESCCSSSSCCSEEEECEEETT
T ss_pred ccCceEecc-ccCeEEECCEEECCCCceEEEec---------CCCcEEECcEEECCcccccccceEEEEecCCC
Confidence 456787776 7999999999987 46888863 6899999999997643 45555555443
No 39
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.42 E-value=5.7e-06 Score=81.23 Aligned_cols=107 Identities=11% Similarity=0.128 Sum_probs=73.3
Q ss_pred eeeeEEEeceEEecCCC------CeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEEeCCC
Q 015319 269 GSFNVTVTGITIQNSPQ------CHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTG 342 (409)
Q Consensus 269 ~~~nv~I~gvti~ns~~------~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg 342 (409)
.+++++++||+|+|+.. -++.+ .++++.++||.|.. ..|++.....++ .+++|+|...-|-|. +.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf-G~- 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNRQ-FFINCFIAGTVDFIF-GN- 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE-ES-
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCccE-EEEecEEEeeeeEEe-cC-
Confidence 57899999999998742 22554 68999999999998 788888887664 889999987766664 33
Q ss_pred ceeEEEEEEEEcC-C----CeeEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 343 CSNVYVHNVNCGP-G----HGISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 343 ~~nV~I~n~~~~~-g----~GisIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
-...|+||++.. . ..-.|--.++. ....-.-+.|.||+|...
T Consensus 163 -~~a~f~~c~i~~~~~~~~~~~~itA~~r~-~~~~~~G~vf~~c~i~~~ 209 (319)
T 1gq8_A 163 -AAVVLQDCDIHARRPGSGQKNMVTAQGRT-DPNQNTGIVIQKSRIGAT 209 (319)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEECCC-STTCCCEEEEESCEEEEC
T ss_pred -CcEEEEeeEEEEecCCCCCceEEEeCCCC-CCCCCceEEEECCEEecC
Confidence 347888888764 1 11223222211 123345678888888754
No 40
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=98.41 E-value=7.5e-07 Score=93.43 Aligned_cols=120 Identities=15% Similarity=0.031 Sum_probs=82.1
Q ss_pred eEEE---EeeeeEEEeceE----EecCC-CCeEEeecCccEEEEeEEEeCCCCCCCCCceee-cCcc--cEEEEeeEEee
Q 015319 264 ALRF---YGSFNVTVTGIT----IQNSP-QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHL-QNSK--DVLIHTSNLAC 332 (409)
Q Consensus 264 ~i~~---~~~~nv~I~gvt----i~ns~-~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l-~~s~--nV~I~n~~i~~ 332 (409)
.+++ ..|+||+|++++ |.+++ ..+| |+|+||+|.+ .+|+|.+ .+.+ ++.++ .+..
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~ 265 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLH 265 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEEC
T ss_pred EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcC
Confidence 5778 899999999999 76632 1223 8999999988 6889999 6543 45666 4445
Q ss_pred CCCeEEeCC----------------------C-ceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEeccc-
Q 015319 333 GDDCVSIQT----------------------G-CSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNTM- 387 (409)
Q Consensus 333 gDD~Iai~s----------------------g-~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~- 387 (409)
+..+|+|++ | .+||+|+|+++.+ ...|.|...........|+||+|+|++.....
T Consensus 266 GHgGISIGSe~~ggV~NV~V~NrIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~ 345 (600)
T 2x6w_A 266 QHDTFYRGSTVNGYCRGAYVVMHAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGER 345 (600)
T ss_dssp SSSEEEESCEEEEESEEEEEEECGGGCTTTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSC
T ss_pred CCCcEEecccccCcEEEEEEEEEEEeecCCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEeccc
Confidence 555777765 1 5777777777776 45677765322224457999999999988532
Q ss_pred ------ceEEEEeecC
Q 015319 388 ------NGVRIKTWQV 397 (409)
Q Consensus 388 ------~Gi~Ikt~~G 397 (409)
.|..|-.-++
T Consensus 346 aav~~~~g~~i~g~p~ 361 (600)
T 2x6w_A 346 AAFSAPFGAFIDIGPD 361 (600)
T ss_dssp CTTSSSCEEEEEECCC
T ss_pred cccccccceEEEecCc
Confidence 3456665544
No 41
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.38 E-value=6.7e-06 Score=80.65 Aligned_cols=107 Identities=10% Similarity=0.121 Sum_probs=71.8
Q ss_pred eeeeEEEeceEEecCCC------CeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEEeCCC
Q 015319 269 GSFNVTVTGITIQNSPQ------CHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTG 342 (409)
Q Consensus 269 ~~~nv~I~gvti~ns~~------~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg 342 (409)
.+++++++||+|+|+.. -++.+ .++++.++||.|.. ..|++.....++ .+++|+|...-|-|. +.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf-G~- 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQRQ-FYRDSYVTGTVDFIF-GN- 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE-EC-
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCccE-EEEeeEEEeceeEEc-CC-
Confidence 67899999999998742 22544 68889999999998 788888877665 889999987666554 33
Q ss_pred ceeEEEEEEEEcC-C----CeeEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 343 CSNVYVHNVNCGP-G----HGISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 343 ~~nV~I~n~~~~~-g----~GisIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
-...|+||++.. . ..-.|-..++. ....-.-..|.||+|...
T Consensus 159 -~~avf~~c~i~~~~~~~~~~~~itA~~r~-~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 159 -AAVVFQKCQLVARKPGKYQQNMVTAQGRT-DPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEECCC-CTTSCCEEEEESCEEEEC
T ss_pred -ceEEEeeeEEEEeccCCCCccEEEecCcC-CCCCCcEEEEECCEEecC
Confidence 347888887764 1 11222222211 122345677888888754
No 42
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.38 E-value=4.6e-06 Score=86.67 Aligned_cols=86 Identities=5% Similarity=-0.133 Sum_probs=50.4
Q ss_pred eeeEEEeceEEecCCCCe-EEee--------cCccEEEEeEEEeCCCCCCCCC----ceeecC-------cccEEEEeeE
Q 015319 270 SFNVTVTGITIQNSPQCH-LKFD--------NCIGVVVHDVSVSSPGDSPNTD----GIHLQN-------SKDVLIHTSN 329 (409)
Q Consensus 270 ~~nv~I~gvti~ns~~~~-i~~~--------~~~nV~I~n~~I~s~~~~~n~D----GI~l~~-------s~nV~I~n~~ 329 (409)
.++++|+++.|.+...-. +.+. ..++.+|++|+|.......... ||++.. +.+.+|++|+
T Consensus 125 G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~ 204 (506)
T 1dbg_A 125 GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCF 204 (506)
T ss_dssp SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCE
T ss_pred cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcE
Confidence 367778888887764320 2222 4566678888887643222222 777764 3577888887
Q ss_pred Eee------CCCeEEeCCC---ceeEEEEEEEEcC
Q 015319 330 LAC------GDDCVSIQTG---CSNVYVHNVNCGP 355 (409)
Q Consensus 330 i~~------gDD~Iai~sg---~~nV~I~n~~~~~ 355 (409)
|.. +-+.+.++.. .++.+|+|+.|..
T Consensus 205 f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~ 239 (506)
T 1dbg_A 205 FSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMR 239 (506)
T ss_dssp EEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEE
T ss_pred EcccccCCCccccEEEEEEecccCCcEEECCEEEe
Confidence 764 2344555421 3566666666665
No 43
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.35 E-value=5.7e-06 Score=81.38 Aligned_cols=119 Identities=10% Similarity=0.135 Sum_probs=73.7
Q ss_pred eEEEEeeeeEEEeceEEecCC---CCeEEeec-CccEEEEeEEEeCCC----CCCCCCce-ee-cCcccEEEEeeEEeeC
Q 015319 264 ALRFYGSFNVTVTGITIQNSP---QCHLKFDN-CIGVVVHDVSVSSPG----DSPNTDGI-HL-QNSKDVLIHTSNLACG 333 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~---~~~i~~~~-~~nV~I~n~~I~s~~----~~~n~DGI-~l-~~s~nV~I~n~~i~~g 333 (409)
.|++..++||.|++++|.+.. ..+|.+.. +++|.|++|++.... +....||. ++ ..+.+|||.+|.|...
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 467778999999999999864 33477775 788888888886421 11223443 44 3467888888888766
Q ss_pred CCeEEeCCC------ceeEEEEEEEEcCC--CeeEEEecCCCCCCCcEEEEEEEeEEEecc-cceEEE
Q 015319 334 DDCVSIQTG------CSNVYVHNVNCGPG--HGISIGSLGKDNTKACVSNITVRDVMMHNT-MNGVRI 392 (409)
Q Consensus 334 DD~Iai~sg------~~nV~I~n~~~~~g--~GisIGs~g~~~~~~~v~nI~v~n~~~~~~-~~Gi~I 392 (409)
+.+.-++.. -.+|++.+|.+.+. +.=.+.. -.+++-||++.+. .+++..
T Consensus 176 ~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~ 233 (326)
T 3vmv_A 176 WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIRY----------ADVHMFNNYFKDINDTAINS 233 (326)
T ss_dssp EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEES----------CEEEEESCEEEEESSCSEEE
T ss_pred ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCcccC----------CcEEEEccEEECCCceEEee
Confidence 666666553 13677777776541 1112210 1467777777764 355443
No 44
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.34 E-value=6.3e-06 Score=82.08 Aligned_cols=100 Identities=17% Similarity=0.297 Sum_probs=65.9
Q ss_pred eEEeecCccEEEEeEEEeCCCC---------C--CCCCceeecCcccEEEEeeEEeeC------------------CCeE
Q 015319 287 HLKFDNCIGVVVHDVSVSSPGD---------S--PNTDGIHLQNSKDVLIHTSNLACG------------------DDCV 337 (409)
Q Consensus 287 ~i~~~~~~nV~I~n~~I~s~~~---------~--~n~DGI~l~~s~nV~I~n~~i~~g------------------DD~I 337 (409)
++.+..++||.|+|++|+...+ . ...|+|.+.+++||.|++|.|..+ |.++
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 5666778888888888875421 0 246888888888888888888753 4456
Q ss_pred EeCCCceeEEEEEEEEcC-CCeeEEEecCCCC-CCCcEEEEEEEeEEEecc
Q 015319 338 SIQTGCSNVYVHNVNCGP-GHGISIGSLGKDN-TKACVSNITVRDVMMHNT 386 (409)
Q Consensus 338 ai~sg~~nV~I~n~~~~~-g~GisIGs~g~~~-~~~~v~nI~v~n~~~~~~ 386 (409)
.++.++.+|+|.||.|.. ..++-+|+...+. ......+|+|.+|.+.++
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCC
Confidence 666677888888888876 3355566532111 111234677777777654
No 45
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.30 E-value=5e-05 Score=75.54 Aligned_cols=92 Identities=24% Similarity=0.230 Sum_probs=55.9
Q ss_pred eEEEEeeeeEEEeceEEecCC---------------CCeEEeecCccEEEEeEEEeCCCC---------CC---CCCc-e
Q 015319 264 ALRFYGSFNVTVTGITIQNSP---------------QCHLKFDNCIGVVVHDVSVSSPGD---------SP---NTDG-I 315 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~---------------~~~i~~~~~~nV~I~n~~I~s~~~---------~~---n~DG-I 315 (409)
.|.+.+++||.|++|+|.+.. ..+|.+..+++|.|++|++....+ +. ..|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 455667788888888887531 235777788888888888875310 00 1355 3
Q ss_pred eec-CcccEEEEeeEEeeCCCeEEeCCC---------ceeEEEEEEEEcC
Q 015319 316 HLQ-NSKDVLIHTSNLACGDDCVSIQTG---------CSNVYVHNVNCGP 355 (409)
Q Consensus 316 ~l~-~s~nV~I~n~~i~~gDD~Iai~sg---------~~nV~I~n~~~~~ 355 (409)
++. .+.+|||.+|.|...+.+.-++.. ..+|+|++|.+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~ 226 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDR 226 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeC
Confidence 343 567888888888766555555432 1146666665543
No 46
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.27 E-value=9.4e-06 Score=80.58 Aligned_cols=72 Identities=14% Similarity=0.197 Sum_probs=43.5
Q ss_pred eEEEEeeeeEEEeceEEecCC----------------------CCeEEeecCccEEEEeEEEeCCCCCCCCCce-ee-cC
Q 015319 264 ALRFYGSFNVTVTGITIQNSP----------------------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGI-HL-QN 319 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~----------------------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI-~l-~~ 319 (409)
.|.+..++||.|++++|.+.. ..+|.+..+++|.|++|+|.. ..||+ ++ ..
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~ 181 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLG 181 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESS
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccC
Confidence 456678899999999998752 123555566666666666655 34554 34 35
Q ss_pred cccEEEEeeEEeeCCCeEEeC
Q 015319 320 SKDVLIHTSNLACGDDCVSIQ 340 (409)
Q Consensus 320 s~nV~I~n~~i~~gDD~Iai~ 340 (409)
+.+|||++|.|...+.++-++
T Consensus 182 s~~vTISnn~f~~H~k~~l~G 202 (346)
T 1pxz_A 182 STGITISNNHFFNHHKVMLLG 202 (346)
T ss_dssp CEEEEEESCEEESEEEEEEES
T ss_pred cceEEEEeeEEecCCceeEEC
Confidence 556666666665544444443
No 47
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.25 E-value=0.00015 Score=69.78 Aligned_cols=193 Identities=19% Similarity=0.239 Sum_probs=128.6
Q ss_pred CCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCcccCCCccccceEEEec--ceEEcCCCCc
Q 015319 106 HSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPMSFSGPYCQANIIFQLD--GTIIAPTGSK 183 (409)
Q Consensus 106 ~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~--Gtl~~~~~~~ 183 (409)
.++++.+++|||.+|-.+||+++|.+.+.. -..|++|+| .|-..-+.+ +...|+.. |+|..-+..
T Consensus 61 darvls~k~fga~~~~~~d~~~~~~~sl~s-----~~~v~i~~g-vf~ss~i~~------~~c~l~g~g~g~~~~~~~~- 127 (542)
T 2x3h_A 61 DARVLTSKPFGAAGDATTDDTEVIAASLNS-----QKAVTISDG-VFSSSGINS------NYCNLDGRGSGVLSHRSST- 127 (542)
T ss_dssp HHHBCBSSCTTCCCBSSSCCHHHHHHHHTS-----SSCEECCSE-EEEECCEEE------SCCEEECTTTEEEEECSSS-
T ss_pred hheeeecccccccCCcccCcHHHHHhhhcc-----cccEecccc-ccccccccc------ccccccccCCceeeeecCC-
Confidence 467889999999999999999999987754 357999999 888777765 33467766 477653322
Q ss_pred ccCCCceeeEEEe-----cccCeeeeeceEEeCCCcccccCCCCCCCCCccccccccccCCCCCCCCCCCccccccCCCC
Q 015319 184 DWGKGLLWWLDFT-----KLKGITIQGKGIIDGRGSVWWQDYPYDDPIDDESKLIIPLHNNTLPYKPPTPIRSELSGKMP 258 (409)
Q Consensus 184 ~~~~g~~~~i~~~-----~~~nVtI~G~G~IdG~G~~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (409)
...+.|. .+++++|.|+ - ..+
T Consensus 128 ------gn~lvfn~p~~g~ls~~ti~~n------k------------------------------------------~~d 153 (542)
T 2x3h_A 128 ------GNYLVFNNPRTGRLSNITVESN------K------------------------------------------ATD 153 (542)
T ss_dssp ------SCCEEEESCEEEEEEEEEEECC------C------------------------------------------SST
T ss_pred ------CCEEEEeCCCCcceeeEEEecc------c------------------------------------------CCc
Confidence 2223332 3566777662 1 111
Q ss_pred CCCceeEEEEeeeeEEEeceEEecCCCCeEEee------cCccEEEEeEEEeCCCCCC--CCCceeecCcccEEEEeeEE
Q 015319 259 SIKPTALRFYGSFNVTVTGITIQNSPQCHLKFD------NCIGVVVHDVSVSSPGDSP--NTDGIHLQNSKDVLIHTSNL 330 (409)
Q Consensus 259 ~~rp~~i~~~~~~nv~I~gvti~ns~~~~i~~~------~~~nV~I~n~~I~s~~~~~--n~DGI~l~~s~nV~I~n~~i 330 (409)
....+.+.|.+-.+|+++++.|.|....++.+. --++..|++++=.-.+... .+-++-++++.|-+|++...
T Consensus 154 s~qg~qvs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via 233 (542)
T 2x3h_A 154 TTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIA 233 (542)
T ss_dssp TCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEE
T ss_pred cccceEEEecCCCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhh
Confidence 224456888999999999999999887776543 2356788888876544433 33345557889999999988
Q ss_pred eeCC--CeEEeCCCceeEEEEEEEEcCC-CeeEEEecC
Q 015319 331 ACGD--DCVSIQTGCSNVYVHNVNCGPG-HGISIGSLG 365 (409)
Q Consensus 331 ~~gD--D~Iai~sg~~nV~I~n~~~~~g-~GisIGs~g 365 (409)
++.- .++-++...+.-.|.|++-..+ |-..-|.++
T Consensus 234 ~nypqfgavelk~~a~ynivsnvig~~cqhv~yngte~ 271 (542)
T 2x3h_A 234 KNYPQFGAVELKGTASYNIVSNVIGADCQHVTYNGTEG 271 (542)
T ss_dssp ESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEEECSS
T ss_pred hcCCccceEEeecceeeehhhhhhhccceeEEECCccC
Confidence 8753 4677777655445555543333 223444443
No 48
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.23 E-value=5.8e-06 Score=82.08 Aligned_cols=101 Identities=15% Similarity=0.178 Sum_probs=76.7
Q ss_pred CCeEEeecCccEEEEeEEEeCCC------------------CCCCCCceeecCcccEEEEeeEEeeCCCeE-EeCCCcee
Q 015319 285 QCHLKFDNCIGVVVHDVSVSSPG------------------DSPNTDGIHLQNSKDVLIHTSNLACGDDCV-SIQTGCSN 345 (409)
Q Consensus 285 ~~~i~~~~~~nV~I~n~~I~s~~------------------~~~n~DGI~l~~s~nV~I~n~~i~~gDD~I-ai~sg~~n 345 (409)
..++.+..++||.|+|++|+... .....|||.+.+++||.|++|.|..+.|++ .+.-++.+
T Consensus 105 G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~ 184 (346)
T 1pxz_A 105 GPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTG 184 (346)
T ss_dssp SCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEE
T ss_pred cceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcce
Confidence 36788889999999999998531 125789999999999999999999887775 67667999
Q ss_pred EEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEE-ecc
Q 015319 346 VYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMM-HNT 386 (409)
Q Consensus 346 V~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~-~~~ 386 (409)
|+|+||.+.. ..++-+|+...+ ......+|+|.+|.+ .++
T Consensus 185 vTISnn~f~~H~k~~l~G~sd~~-~~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 185 ITISNNHFFNHHKVMLLGHDDTY-DDDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp EEEESCEEESEEEEEEESCCSSC-GGGGGCEEEEESCEECSSE
T ss_pred EEEEeeEEecCCceeEECCCCcc-ccCCceEEEEEeeEEeCCc
Confidence 9999999997 336777664221 112235778888887 543
No 49
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.16 E-value=8.5e-05 Score=73.83 Aligned_cols=129 Identities=12% Similarity=0.145 Sum_probs=83.4
Q ss_pred eEEEEeeeeEEEeceEEecCC-----CCeEEeecCccEEEEeEEEeCCCCC--------CCCCce-ee-cCcccEEEEee
Q 015319 264 ALRFYGSFNVTVTGITIQNSP-----QCHLKFDNCIGVVVHDVSVSSPGDS--------PNTDGI-HL-QNSKDVLIHTS 328 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~-----~~~i~~~~~~nV~I~n~~I~s~~~~--------~n~DGI-~l-~~s~nV~I~n~ 328 (409)
.|.+.+++||.|++|+|...+ ...|.+..+++|.|++|++....+. ...||. ++ ..+.+|||.+|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 577789999999999999654 3458899999999999999864211 113554 55 46889999999
Q ss_pred EEeeCCCeEEeCCC----ceeEEEEEEEEcC------------------------CCeeEEEecCCCCCCCcEEEEEEEe
Q 015319 329 NLACGDDCVSIQTG----CSNVYVHNVNCGP------------------------GHGISIGSLGKDNTKACVSNITVRD 380 (409)
Q Consensus 329 ~i~~gDD~Iai~sg----~~nV~I~n~~~~~------------------------g~GisIGs~g~~~~~~~v~nI~v~n 380 (409)
.|...+.+.-++.. ..+|+|++|.+.+ ++||..+. -..|.+++
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~---------~~~i~~e~ 254 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQ---------NGQALIEN 254 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEESSEEEEESCEEEEESSCSEEEET---------TCEEEEES
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcCceEEEEccEEECCCCceeccCC---------CcEEEEEc
Confidence 99865444444332 1345665554433 12222211 13789999
Q ss_pred EEEecccceEEEEeecCC-CCeE
Q 015319 381 VMMHNTMNGVRIKTWQVM-IPSG 402 (409)
Q Consensus 381 ~~~~~~~~Gi~Ikt~~G~-~g~v 402 (409)
|+|++..+.+ .+.+++. .|+.
T Consensus 255 N~F~~~~~p~-~~~~~~~~~g~~ 276 (353)
T 1air_A 255 NWFEKAINPV-TSRYDGKNFGTW 276 (353)
T ss_dssp CEEEEEESSE-EECSSSSSCCEE
T ss_pred eEEECCCCce-EecCCCCCCcee
Confidence 9999877665 3444432 3443
No 50
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.14 E-value=5.1e-06 Score=84.33 Aligned_cols=99 Identities=15% Similarity=0.243 Sum_probs=59.2
Q ss_pred eEEeecCccEEEEeEEEeCCCC---------------CCCCCceeecCcccEEEEeeEEeeC------------------
Q 015319 287 HLKFDNCIGVVVHDVSVSSPGD---------------SPNTDGIHLQNSKDVLIHTSNLACG------------------ 333 (409)
Q Consensus 287 ~i~~~~~~nV~I~n~~I~s~~~---------------~~n~DGI~l~~s~nV~I~n~~i~~g------------------ 333 (409)
+|.+..++||.|+|++|+...+ ....|+|.+.+++||.|++|.|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 5666677777777777765321 1245778887788888888887743
Q ss_pred CCeEEeCCCceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEec
Q 015319 334 DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHN 385 (409)
Q Consensus 334 DD~Iai~sg~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~ 385 (409)
|.++.++.++.+|+|.||.|.. ..++-||+...+.......+|+|.+|.|.+
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~ 281 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKN 281 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEE
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecC
Confidence 5556666667888888887776 224555543211111112245555555544
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.11 E-value=0.00016 Score=71.36 Aligned_cols=117 Identities=12% Similarity=-0.022 Sum_probs=69.2
Q ss_pred eeEEEEeeeeEEEeceEEecCCCCeEEee-cCccEEEEeEEEeCCCCC---CCCCcee---ecCcccEEEEeeEEeeCC-
Q 015319 263 TALRFYGSFNVTVTGITIQNSPQCHLKFD-NCIGVVVHDVSVSSPGDS---PNTDGIH---LQNSKDVLIHTSNLACGD- 334 (409)
Q Consensus 263 ~~i~~~~~~nv~I~gvti~ns~~~~i~~~-~~~nV~I~n~~I~s~~~~---~n~DGI~---l~~s~nV~I~n~~i~~gD- 334 (409)
.+|.+.+++||-|+.++|.....-.+++. .+++|+|+++.|...... ...|+-. ..+..+|+++++.+.+..
T Consensus 117 DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~ 196 (340)
T 3zsc_A 117 DYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQ 196 (340)
T ss_dssp CSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCB
T ss_pred CeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCC
Confidence 46777788888888888887755556665 478888888888764321 1112110 011236888888775421
Q ss_pred CeEEeCCCceeEEEEEEEEcC----------CCeeEEEecCCCCCCCcEEEEEEEeEEEecccc
Q 015319 335 DCVSIQTGCSNVYVHNVNCGP----------GHGISIGSLGKDNTKACVSNITVRDVMMHNTMN 388 (409)
Q Consensus 335 D~Iai~sg~~nV~I~n~~~~~----------g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~ 388 (409)
..=.++.| .++|-||.+.+ -.+.+|+.-. =..|.+|+|+|.+..+
T Consensus 197 R~Pr~r~G--~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~-------~a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 197 RMPRIRFG--MAHVFNNFYSMGLRTGVSGNVFPIYGVASAM-------GAKVHVEGNYFMGYGA 251 (340)
T ss_dssp CTTEEESS--EEEEESCEEECCCCCSCSSCCSCCEEEEEET-------TCEEEEESCEEECSCH
T ss_pred CCCcccCC--eEEEEccEEECCccccccccceeeeeEecCC-------CCEEEEECcEEECCCc
Confidence 11122222 56777777776 2223443320 1489999999998877
No 52
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.10 E-value=1.7e-05 Score=78.97 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=38.8
Q ss_pred EEEE-eeeeEEEeceEEecC------CCCeEEeecCccEEEEeEEEeCCCCCCCCCcee---ecCcccEEEEeeEEe
Q 015319 265 LRFY-GSFNVTVTGITIQNS------PQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIH---LQNSKDVLIHTSNLA 331 (409)
Q Consensus 265 i~~~-~~~nv~I~gvti~ns------~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~---l~~s~nV~I~n~~i~ 331 (409)
|.+. +++||.|++|+|.+. ...+|.+..+++|.|++|++... .|+.. ...+.+|||.+|.|.
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEE
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEec
Confidence 4555 667777777777752 12346677777777777777752 33333 345667777777775
No 53
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.08 E-value=4.4e-05 Score=75.25 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=56.5
Q ss_pred eEEEE-eeeeEEEeceEEecCC----CCeEEee-----cCccEEEEeEEEeCCCC------CCCCCc-eeec-CcccEEE
Q 015319 264 ALRFY-GSFNVTVTGITIQNSP----QCHLKFD-----NCIGVVVHDVSVSSPGD------SPNTDG-IHLQ-NSKDVLI 325 (409)
Q Consensus 264 ~i~~~-~~~nv~I~gvti~ns~----~~~i~~~-----~~~nV~I~n~~I~s~~~------~~n~DG-I~l~-~s~nV~I 325 (409)
.|.+. +++||.|++|+|.+.. ..+|.+. .+++|.|++|++....+ ....|| +++. .+.+|||
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57777 8999999999999774 4568888 59999999999975321 011254 4553 5889999
Q ss_pred EeeEEeeCCCeEEeCC
Q 015319 326 HTSNLACGDDCVSIQT 341 (409)
Q Consensus 326 ~n~~i~~gDD~Iai~s 341 (409)
.+|.|.+.+.++-++.
T Consensus 167 Snn~f~~h~k~~L~G~ 182 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGY 182 (330)
T ss_dssp ESCEEEEEEECCEESS
T ss_pred EcceeccCCeEEEECC
Confidence 9999986555554443
No 54
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.05 E-value=2.3e-05 Score=77.46 Aligned_cols=116 Identities=17% Similarity=0.170 Sum_probs=78.7
Q ss_pred eeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCC-------CCCCCceeecCcccEEEEeeEEeeC-CCeEEeCCC
Q 015319 271 FNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGD-------SPNTDGIHLQNSKDVLIHTSNLACG-DDCVSIQTG 342 (409)
Q Consensus 271 ~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~-------~~n~DGI~l~~s~nV~I~n~~i~~g-DD~Iai~sg 342 (409)
.|.+|.|..-.--...+|.+..++||.|+|++|+.... ....|+|.+..++||.|++|.|..+ |.++.+..+
T Consensus 68 snkTI~G~ga~~I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~ 147 (340)
T 3zsc_A 68 SDKTIVGINDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKY 147 (340)
T ss_dssp SSEEEEEEEEEEEEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETT
T ss_pred CCCEEEeccCcEEecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecC
Confidence 45566555432001235777788999999999987521 1278999999999999999999865 556888878
Q ss_pred ceeEEEEEEEEcCC-CeeEEEecCCCC--CCCcEEEEEEEeEEEecc
Q 015319 343 CSNVYVHNVNCGPG-HGISIGSLGKDN--TKACVSNITVRDVMMHNT 386 (409)
Q Consensus 343 ~~nV~I~n~~~~~g-~GisIGs~g~~~--~~~~v~nI~v~n~~~~~~ 386 (409)
+.+|+|.||.|... .++-+|+.-.+. ....-.+|+|.+|.+.++
T Consensus 148 s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 148 SNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp CEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred CceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 99999999999873 356666531100 000124677777777654
No 55
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.05 E-value=0.00018 Score=71.69 Aligned_cols=62 Identities=19% Similarity=0.176 Sum_probs=42.4
Q ss_pred EEEE-eeeeEEEeceEEecCC------CCeEEeecCccEEEEeEEEeCCCCCCCCCcee---ecCcccEEEEeeEEe
Q 015319 265 LRFY-GSFNVTVTGITIQNSP------QCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIH---LQNSKDVLIHTSNLA 331 (409)
Q Consensus 265 i~~~-~~~nv~I~gvti~ns~------~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~---l~~s~nV~I~n~~i~ 331 (409)
|.+. .++||.|++|+|++.. ..+|.+..+++|.|++|++.. ..|+.. ...+.+|||.+|.|.
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~-----~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTAR-----IGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEE-----ESSCSEEECSSCCEEEEEESCEEE
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeec-----cCcCceeecccccccEEEECcEec
Confidence 5555 6778888888887643 235777778888888888876 234432 235778888888886
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.03 E-value=1.5e-05 Score=79.32 Aligned_cols=112 Identities=18% Similarity=0.183 Sum_probs=82.6
Q ss_pred eeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCC-CCCCCCceeecCcccEEEEeeEEeeC--------------C
Q 015319 270 SFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG-DSPNTDGIHLQNSKDVLIHTSNLACG--------------D 334 (409)
Q Consensus 270 ~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~-~~~n~DGI~l~~s~nV~I~n~~i~~g--------------D 334 (409)
..|++|.|.+-. ....+|.+..++||.|+|++|+... .....|+|.+..++||.|++|.|..+ |
T Consensus 88 ~sn~TI~G~~~~-~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~D 166 (353)
T 1air_A 88 TKGITIIGANGS-SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFE 166 (353)
T ss_dssp CSCEEEEECTTC-CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSC
T ss_pred CCCEEEEeccCC-CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccc
Confidence 357788875321 1245788889999999999999642 23468999999999999999999643 4
Q ss_pred CeEEeCCCceeEEEEEEEEcCCC-eeEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 335 DCVSIQTGCSNVYVHNVNCGPGH-GISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 335 D~Iai~sg~~nV~I~n~~~~~g~-GisIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
..+.++-++.+|+|.||.|...+ +.-+|+... ..+ .+|+|.+|.+.++
T Consensus 167 Gl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~--~~g--~~vT~hhN~f~~~ 215 (353)
T 1air_A 167 SAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS--DTG--RNITYHHNYYNDV 215 (353)
T ss_dssp CSEEEESSCCEEEEESCEEEEEEECCEESSSTT--CCC--CEEEEESCEEEEE
T ss_pred cceeeecccCcEEEEeeEEcCCCceeEECCCcC--CCC--ceEEEEceEEcCC
Confidence 45777778899999999999733 355555321 112 6888888888764
No 57
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.03 E-value=9.9e-06 Score=81.79 Aligned_cols=98 Identities=13% Similarity=0.220 Sum_probs=61.0
Q ss_pred eEEeecCccEEEEeEEEeCCCC---------------CCCCCceeecCcccEEEEeeEEeeC------------------
Q 015319 287 HLKFDNCIGVVVHDVSVSSPGD---------------SPNTDGIHLQNSKDVLIHTSNLACG------------------ 333 (409)
Q Consensus 287 ~i~~~~~~nV~I~n~~I~s~~~---------------~~n~DGI~l~~s~nV~I~n~~i~~g------------------ 333 (409)
+|.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 566666 788888888875421 1246888888888888888888753
Q ss_pred CCeEEeCCCceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEec
Q 015319 334 DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHN 385 (409)
Q Consensus 334 DD~Iai~sg~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~ 385 (409)
|.++.++.++.+|+|.||.|.. ..++-||+...+.......+|+|.+|.+.+
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~ 275 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKN 275 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEE
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecC
Confidence 5566777777888888888876 234555553211111112355555555554
No 58
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.02 E-value=1.8e-05 Score=77.98 Aligned_cols=119 Identities=13% Similarity=0.209 Sum_probs=81.6
Q ss_pred EEEeeeeEEEeceEEecCCCCeEEee-cCccEEEEeEEEeCCCCCCCCCceeec-----CcccEEEEeeEEeeC------
Q 015319 266 RFYGSFNVTVTGITIQNSPQCHLKFD-NCIGVVVHDVSVSSPGDSPNTDGIHLQ-----NSKDVLIHTSNLACG------ 333 (409)
Q Consensus 266 ~~~~~~nv~I~gvti~ns~~~~i~~~-~~~nV~I~n~~I~s~~~~~n~DGI~l~-----~s~nV~I~n~~i~~g------ 333 (409)
.+.-..|.+|.|-+.. -...+|.+. .++||.|+|++|+........|+|.+. .++||.|++|.|..+
T Consensus 67 ~l~v~sn~TI~G~~a~-i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~ 145 (330)
T 2qy1_A 67 QIKNKSDVTIKGANGS-AANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSG 145 (330)
T ss_dssp EEESCCSEEEEECTTC-BBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTT
T ss_pred EEEcCCCeEEECCCcE-EeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEcccccccc
Confidence 3444566777542210 014568888 899999999999974322368999999 599999999999532
Q ss_pred ------CCeEEeCCCceeEEEEEEEEcC-CCeeEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 334 ------DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 334 ------DD~Iai~sg~~nV~I~n~~~~~-g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
|..+.++.++.+|+|.||.|.. ..++-+|+...+.. ....+|+|.+|.+.++
T Consensus 146 ~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~-~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 146 AGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTK-NSAARTTYHHNRFENV 204 (330)
T ss_dssp CTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGG-GGGCEEEEESCEEEEE
T ss_pred CCcceeecccccccCcceEEEEcceeccCCeEEEECCCCcccc-CCCceEEEECcEEcCC
Confidence 5567788789999999999986 23455665321111 1124788888877764
No 59
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.94 E-value=2.4e-05 Score=78.05 Aligned_cols=100 Identities=19% Similarity=0.317 Sum_probs=60.9
Q ss_pred CeEEe---ecCccEEEEeEEEeCCCCC-----------CCCCceeecC-cccEEEEeeEEeeC-----------------
Q 015319 286 CHLKF---DNCIGVVVHDVSVSSPGDS-----------PNTDGIHLQN-SKDVLIHTSNLACG----------------- 333 (409)
Q Consensus 286 ~~i~~---~~~~nV~I~n~~I~s~~~~-----------~n~DGI~l~~-s~nV~I~n~~i~~g----------------- 333 (409)
.+|.+ ..++||.|+|++|+...+. ...|+|.+.. ++||.|++|.|..+
T Consensus 103 ~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~ 182 (361)
T 1pe9_A 103 GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQ 182 (361)
T ss_dssp SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCC
T ss_pred CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceee
Confidence 35666 5677777777777754210 2467888887 88888888888743
Q ss_pred -CCeEEeCCCceeEEEEEEEEcC-CCeeEEEecCCCC-CCCcEEEEEEEeEEEec
Q 015319 334 -DDCVSIQTGCSNVYVHNVNCGP-GHGISIGSLGKDN-TKACVSNITVRDVMMHN 385 (409)
Q Consensus 334 -DD~Iai~sg~~nV~I~n~~~~~-g~GisIGs~g~~~-~~~~v~nI~v~n~~~~~ 385 (409)
|.++.++.++.+|+|.||.|.. ..++=||+...+. ....-.+|+|.+|.+.+
T Consensus 183 ~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~ 237 (361)
T 1pe9_A 183 HDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNR 237 (361)
T ss_dssp CCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEE
T ss_pred ccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcC
Confidence 5567777777888888888876 2244455421100 00012356666665554
No 60
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.87 E-value=0.00014 Score=72.48 Aligned_cols=121 Identities=13% Similarity=0.020 Sum_probs=74.1
Q ss_pred eeEEEEeeeeEEEeceEEecCCCCeEE--eecCccEEEEeEEEeCCCC-CCCCCcee-----e-cCcccEEEEeeEEeeC
Q 015319 263 TALRFYGSFNVTVTGITIQNSPQCHLK--FDNCIGVVVHDVSVSSPGD-SPNTDGIH-----L-QNSKDVLIHTSNLACG 333 (409)
Q Consensus 263 ~~i~~~~~~nv~I~gvti~ns~~~~i~--~~~~~nV~I~n~~I~s~~~-~~n~DGI~-----l-~~s~nV~I~n~~i~~g 333 (409)
.+|.+.+++||-|++++|.....-.+. ...+++|+|+++.|....+ +...+|.| | ..+.+|+++++.+.+.
T Consensus 154 DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~ 233 (359)
T 1qcx_A 154 DAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNL 233 (359)
T ss_dssp CSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESB
T ss_pred ceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecCCCCeehcccEeccC
Confidence 577888888888888888866443342 3468888888888875321 12233333 3 2356888888888643
Q ss_pred CC-eEEeCCCceeEEEEEEEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEE
Q 015319 334 DD-CVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVR 391 (409)
Q Consensus 334 DD-~Iai~sg~~nV~I~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~ 391 (409)
.. .=.+.. ...++|.|+.+..-.+.+|+.- .-..|.+++|+|.+..+.+.
T Consensus 234 ~~R~Pr~r~-~~~~hv~NN~~~n~~~~a~~~~-------~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 234 SGRMPKVQG-NTLLHAVNNLFHNFDGHAFEIG-------TGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp CSCTTEECS-SEEEEEESCEEEEEEEEEEEEC-------TTEEEEEESCEEEEEEEEEC
T ss_pred cccCceecC-CceEEEEccEEECccCeEEecC-------CCceEEEEeeEEECCCcccC
Confidence 21 111121 2467888887776333333321 12578888888888766654
No 61
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.79 E-value=0.00031 Score=69.54 Aligned_cols=106 Identities=10% Similarity=0.107 Sum_probs=72.8
Q ss_pred EeeeeEEEeceEEecCCC------------------C--eEE-eecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEE
Q 015319 268 YGSFNVTVTGITIQNSPQ------------------C--HLK-FDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIH 326 (409)
Q Consensus 268 ~~~~nv~I~gvti~ns~~------------------~--~i~-~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~ 326 (409)
..+++++++||+|+|+.. . ++. -..++++.+++|.|.. ..|.+..... ...++
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~g-r~~~~ 166 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSGG-RSFFS 166 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECSS-EEEEE
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECCC-CEEEE
Confidence 368899999999999751 1 242 2578999999999999 7888888754 68889
Q ss_pred eeEEeeCCCeEEeCCCceeEEEEEEEEcC-C-----C----e-eEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 327 TSNLACGDDCVSIQTGCSNVYVHNVNCGP-G-----H----G-ISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 327 n~~i~~gDD~Iai~sg~~nV~I~n~~~~~-g-----~----G-isIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
+|+|...-|=| ++. -...|+||++.. . + | |.--+ .. ...-.-+.|.||+|...
T Consensus 167 ~c~I~G~vDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~--~~--~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 167 DCRISGTVDFI-FGD--GTALFNNCDLVSRYRADVKSGNVSGYLTAPS--TN--INQKYGLVITNSRVIRE 230 (342)
T ss_dssp SCEEEESEEEE-EES--SEEEEESCEEEECCCTTSCTTSCCEEEEEEC--CB--TTCSCCEEEESCEEEES
T ss_pred cCEEEeceEEE-eCC--ceEEEecCEEEEecCcccccccCceEEEccC--CC--CCCCCEEEEEcCEEecC
Confidence 99998765544 333 348899998864 1 1 3 32222 11 11223478999999864
No 62
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=97.77 E-value=0.0006 Score=67.95 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=74.6
Q ss_pred EeeeeEEEeceEEecCCC--------------------CeEEee-cCccEEEEeEEEeCCCCCCCCCceeecCcccEEEE
Q 015319 268 YGSFNVTVTGITIQNSPQ--------------------CHLKFD-NCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIH 326 (409)
Q Consensus 268 ~~~~nv~I~gvti~ns~~--------------------~~i~~~-~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~ 326 (409)
..+++++++||+|+|+.. -++.+. ..+.+.+.+|.|.. ..|.+.........++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFS 193 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEE
Confidence 467899999999999842 125554 58999999999999 7899988755678999
Q ss_pred eeEEeeCCCeEEeCCCceeEEEEEEEEcC-C-------Ce-eEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 327 TSNLACGDDCVSIQTGCSNVYVHNVNCGP-G-------HG-ISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 327 n~~i~~gDD~Iai~sg~~nV~I~n~~~~~-g-------~G-isIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
+|+|...-|=|. +. -...|+||++.. . .| |.--+ .+ ...-.-+.|.||+|...
T Consensus 194 ~c~I~GtvDFIF-G~--a~a~f~~c~i~~~~~~~~~~~~g~ITA~~--~~--~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 194 DCEISGHVDFIF-GS--GITVFDNCNIVARDRSDIEPPYGYITAPS--TL--TTSPYGLIFINSRLTKE 255 (364)
T ss_dssp SCEEEESEEEEE-ES--SEEEEESCEEEECCCSSCSSCCEEEEEEC--CC--TTCSCCEEEESCEEEEC
T ss_pred cCEEEcCCCEEC-Cc--ceEEEEeeEEEEeccCcccCCccEEEeCC--cC--CCCCcEEEEEeeEEecC
Confidence 999987655443 33 457889998864 1 13 33322 21 11123478889988854
No 63
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.73 E-value=0.00014 Score=72.44 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=63.9
Q ss_pred eeEEEece----EEecCCCCeEEee-cCccEEEEeEEEeCC--CCCCCCCceeecCcccEEEEeeEEee-CCCeEEe-CC
Q 015319 271 FNVTVTGI----TIQNSPQCHLKFD-NCIGVVVHDVSVSSP--GDSPNTDGIHLQNSKDVLIHTSNLAC-GDDCVSI-QT 341 (409)
Q Consensus 271 ~nv~I~gv----ti~ns~~~~i~~~-~~~nV~I~n~~I~s~--~~~~n~DGI~l~~s~nV~I~n~~i~~-gDD~Iai-~s 341 (409)
.|.+|.|. .|.. .+|.+. .++||.|+|++|+.. ......|+|.+..++||.|++|.|.. +|..+.. ..
T Consensus 108 snkTI~G~G~~~~i~G---~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~ 184 (359)
T 1idk_A 108 SNKSLIGEGSSGAIKG---KGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTS 184 (359)
T ss_dssp SSEEEEECTTTCEEES---CCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCC
T ss_pred CCceEEEecCCeEEec---ceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEeccc
Confidence 56677654 4543 357777 899999999999973 22246799999999999999999975 5667765 44
Q ss_pred CceeEEEEEEEEcC
Q 015319 342 GCSNVYVHNVNCGP 355 (409)
Q Consensus 342 g~~nV~I~n~~~~~ 355 (409)
++.+|+|.||.|.+
T Consensus 185 ~s~~VTISnn~f~~ 198 (359)
T 1idk_A 185 ADNRVSLTNNYIDG 198 (359)
T ss_dssp TTCEEEEESCEEEC
T ss_pred CcceEEEECcEecC
Confidence 68999999999974
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.64 E-value=0.00031 Score=69.98 Aligned_cols=77 Identities=23% Similarity=0.251 Sum_probs=48.8
Q ss_pred eEEE---EeeeeEEEeceEEecCC---------------CCeEEeec-CccEEEEeEEEeCCCC------------CCCC
Q 015319 264 ALRF---YGSFNVTVTGITIQNSP---------------QCHLKFDN-CIGVVVHDVSVSSPGD------------SPNT 312 (409)
Q Consensus 264 ~i~~---~~~~nv~I~gvti~ns~---------------~~~i~~~~-~~nV~I~n~~I~s~~~------------~~n~ 312 (409)
.|.+ .+++||.|++|+|.+.. ..+|.+.. +++|.|+.|++....+ ....
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 4566 57788888888887531 23577777 8888888888875311 0113
Q ss_pred Cc-eeec-CcccEEEEeeEEeeCCCeEEeC
Q 015319 313 DG-IHLQ-NSKDVLIHTSNLACGDDCVSIQ 340 (409)
Q Consensus 313 DG-I~l~-~s~nV~I~n~~i~~gDD~Iai~ 340 (409)
|| |++. .+.+|||.+|.|...+.++-++
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG 213 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIG 213 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEES
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEec
Confidence 54 4453 5778888888887544444343
No 65
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.55 E-value=0.00042 Score=70.26 Aligned_cols=78 Identities=12% Similarity=0.162 Sum_probs=56.9
Q ss_pred eEEEEeeeeEEEeceEEecC-------------------CCCeEEeecCccEEEEeEEEeCCCC------------CCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNS-------------------PQCHLKFDNCIGVVVHDVSVSSPGD------------SPNT 312 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns-------------------~~~~i~~~~~~nV~I~n~~I~s~~~------------~~n~ 312 (409)
.|.+.+++||.|++|+|.+. ...+|.+..+++|.|++|++....+ ....
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 57778999999999999764 2345889999999999999986321 0124
Q ss_pred Cc-eeec-CcccEEEEeeEEeeCCCeEEeCC
Q 015319 313 DG-IHLQ-NSKDVLIHTSNLACGDDCVSIQT 341 (409)
Q Consensus 313 DG-I~l~-~s~nV~I~n~~i~~gDD~Iai~s 341 (409)
|| +++. .+.+|||.+|.|...+.++-++.
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~ 259 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGA 259 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECS
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCC
Confidence 65 3454 68899999999986554444443
No 66
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.47 E-value=0.0005 Score=68.99 Aligned_cols=111 Identities=6% Similarity=0.108 Sum_probs=83.7
Q ss_pred eeEEEeceEEecC-----C------CCeEEeec-CccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEE
Q 015319 271 FNVTVTGITIQNS-----P------QCHLKFDN-CIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVS 338 (409)
Q Consensus 271 ~nv~I~gvti~ns-----~------~~~i~~~~-~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Ia 338 (409)
.+|+|++++|++. . .-+|.+.. ++++.|+++.|.. +.-||.++.+++++|+++.|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6677777777766 3 22477775 8899999999999 7789999999999999999997678899
Q ss_pred eCCCceeEEEEEEEEcC---CCeeEEEecCCCCCCCcEEEEEEEeEEE-ecccceEEEEee
Q 015319 339 IQTGCSNVYVHNVNCGP---GHGISIGSLGKDNTKACVSNITVRDVMM-HNTMNGVRIKTW 395 (409)
Q Consensus 339 i~sg~~nV~I~n~~~~~---g~GisIGs~g~~~~~~~v~nI~v~n~~~-~~~~~Gi~Ikt~ 395 (409)
+...++...|+|+.+.. |+||.+.. ..+.+|++|++ .+...||.+..-
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~n---------s~~~~I~~N~i~~~~R~gIh~m~s 262 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAEN---------HEGLLVTGNNLFPRGRSLIEFTGC 262 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEES---------EESCEEESCEECSCSSEEEEEESC
T ss_pred eccccccceEecceeeecCCCCEEEEEe---------CCCCEEECCCcccCcceEEEEEcc
Confidence 98867888888988886 33455542 45666666655 446677776543
No 67
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.47 E-value=0.00027 Score=71.38 Aligned_cols=92 Identities=7% Similarity=0.009 Sum_probs=70.7
Q ss_pred eEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCc-ccEEEEeeEEeeC---------
Q 015319 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNS-KDVLIHTSNLACG--------- 333 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s-~nV~I~n~~i~~g--------- 333 (409)
.|.+ ...+++|+|++|.|....+|.+.. .+.+|++|+|... ...||.+... .+.+|++|++...
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3555 678999999999998877888886 7889999999982 3349999864 4899999998643
Q ss_pred CCeEEeCCC-ceeEEEEEEEEcC--CCeeEE
Q 015319 334 DDCVSIQTG-CSNVYVHNVNCGP--GHGISI 361 (409)
Q Consensus 334 DD~Iai~sg-~~nV~I~n~~~~~--g~GisI 361 (409)
.|+++++.. .++.+|++|+++. ..||.+
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl 213 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDL 213 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEEC
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEE
Confidence 267887643 3777889998875 345555
No 68
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.28 E-value=0.0011 Score=66.90 Aligned_cols=77 Identities=9% Similarity=0.135 Sum_probs=53.5
Q ss_pred eEEEEeeeeEEEeceEEecC-------------------CCCeEEeecCccEEEEeEEEeCCCC------------CCCC
Q 015319 264 ALRFYGSFNVTVTGITIQNS-------------------PQCHLKFDNCIGVVVHDVSVSSPGD------------SPNT 312 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns-------------------~~~~i~~~~~~nV~I~n~~I~s~~~------------~~n~ 312 (409)
.|.+.. +||.|++|+|.+. ...+|.+..+++|.|++|++....+ ....
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 466777 8999999999753 1245888899999999999986321 0124
Q ss_pred Cce-eec-CcccEEEEeeEEeeCCCeEEeCC
Q 015319 313 DGI-HLQ-NSKDVLIHTSNLACGDDCVSIQT 341 (409)
Q Consensus 313 DGI-~l~-~s~nV~I~n~~i~~gDD~Iai~s 341 (409)
||. ++. .+.+|||.+|.|...+.+.-++.
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~ 253 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGS 253 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESC
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCC
Confidence 653 554 67899999999986544444443
No 69
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.23 E-value=0.011 Score=58.01 Aligned_cols=108 Identities=13% Similarity=0.048 Sum_probs=71.0
Q ss_pred eeEEEEe-eeeEEEeceEEecCC------C--C-eEEee-cCccEEEEeEEEeCCCCCCCCCceeecC-------cccEE
Q 015319 263 TALRFYG-SFNVTVTGITIQNSP------Q--C-HLKFD-NCIGVVVHDVSVSSPGDSPNTDGIHLQN-------SKDVL 324 (409)
Q Consensus 263 ~~i~~~~-~~nv~I~gvti~ns~------~--~-~i~~~-~~~nV~I~n~~I~s~~~~~n~DGI~l~~-------s~nV~ 324 (409)
.+|.+.+ ++||-|+.++|..+. . . .+++. .+++|+|.++.|...+. +.-+.. -.+|+
T Consensus 121 DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k-----~~LiG~sd~~~~~~~~vT 195 (326)
T 3vmv_A 121 TAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWK-----TMLVGHTDNASLAPDKIT 195 (326)
T ss_dssp CSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEE-----CEEECSSSCGGGCCEEEE
T ss_pred CeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCce-----EEEECCCCCCcccCccEE
Confidence 4788886 999999999997542 1 1 24553 58999999999986421 121211 13799
Q ss_pred EEeeEEeeC-CCeEEeCCCceeEEEEEEEEcC--CCeeEEEecCCCCCCCcEEEEEEEeEEEecc
Q 015319 325 IHTSNLACG-DDCVSIQTGCSNVYVHNVNCGP--GHGISIGSLGKDNTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 325 I~n~~i~~g-DD~Iai~sg~~nV~I~n~~~~~--g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~ 386 (409)
++++.+.+. ...=.+.. -.++|-|+.+.+ .+++..+.. ..|.+|+|+|.+.
T Consensus 196 ~~~N~f~~~~~R~Pr~r~--G~~Hv~NN~~~n~~~~~~~~~~~---------a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 196 YHHNYFNNLNSRVPLIRY--ADVHMFNNYFKDINDTAINSRVG---------ARVFVENNYFDNV 249 (326)
T ss_dssp EESCEEEEEEECTTEEES--CEEEEESCEEEEESSCSEEEETT---------CEEEEESCEEEEE
T ss_pred EEeeEecCCcCcCCcccC--CcEEEEccEEECCCceEEeecCC---------cEEEEEceEEECC
Confidence 999998642 11112222 267888888876 466665421 4889999999977
No 70
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.33 E-value=0.014 Score=60.43 Aligned_cols=121 Identities=10% Similarity=0.062 Sum_probs=73.8
Q ss_pred EEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCC-------eE
Q 015319 265 LRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDD-------CV 337 (409)
Q Consensus 265 i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD-------~I 337 (409)
+....+.+.+|++-++.++. .++.+..+.+.+|++..|........+-||.+.++.+ +|+|+.|...+. +|
T Consensus 246 im~skS~~n~i~~N~~~~~~-ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~~~-~I~nN~f~~~~g~~~~~~~GI 323 (506)
T 1dbg_A 246 IITSKSQENVYYGNTYLNCQ-GTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSRH-VIACNYFELSETIKSRGNAAL 323 (506)
T ss_dssp EEEEESBSCEEESCEEESCS-SEEEEEECSSCEEESCEEEECSSSSCBCCEEECSBSC-EEESCEEEESSBCGGGTSEEE
T ss_pred EEEEecCCEEEECCEEEccc-CcEEEeecCccEEECCEEECCcCccCceEEEEECCCC-EEECCEEECCcCccccccccE
Confidence 33334445566766666663 3677777777777777776521101145777766655 788887776543 77
Q ss_pred EeCCCc--------eeEEEEEEEEcCC-C-eeEEEe---------cCCCCCCCcEEEEEEEeEEEeccc
Q 015319 338 SIQTGC--------SNVYVHNVNCGPG-H-GISIGS---------LGKDNTKACVSNITVRDVMMHNTM 387 (409)
Q Consensus 338 ai~sg~--------~nV~I~n~~~~~g-~-GisIGs---------~g~~~~~~~v~nI~v~n~~~~~~~ 387 (409)
.+..|+ +++.|.+++|.+. . ||.|+. .|++.....-.|++|.|+.|.+..
T Consensus 324 ~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 324 YLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETPHQLMLKGNLFFKDK 392 (506)
T ss_dssp EECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCCCSEEEESCEEECCS
T ss_pred EEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCCCcEEEEccEEEcCC
Confidence 777655 6888888877764 3 777770 122222244567888888777654
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.27 E-value=0.012 Score=59.42 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=52.5
Q ss_pred eEEEEeeeeEEEe-ceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecC------------cccEEEEeeEE
Q 015319 264 ALRFYGSFNVTVT-GITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQN------------SKDVLIHTSNL 330 (409)
Q Consensus 264 ~i~~~~~~nv~I~-gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~------------s~nV~I~n~~i 330 (409)
.+++..|+++++. +|.+. ++|+||+|.||.|+. .+|.|.+.+ |++|.
T Consensus 197 TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsV-----GDdciaiksGk~~~~~~~~~~se~~~------ 256 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSR-----GNYSADESFGIRIQPQTYAWSSEAVR------ 256 (514)
T ss_dssp EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEEC-----TTSCCTTCEEEEEECBCCTTTSSCBC------
T ss_pred EEeEeccCceecccCcccc---------CCCCeEEEeccEEec-----CcceeeeecCceecccccCCcchhcc------
Confidence 4677788888877 66664 389999999999999 677777753 45555
Q ss_pred eeCCCeEEeCC-----Ccee-EEEEEEEEcCCC
Q 015319 331 ACGDDCVSIQT-----GCSN-VYVHNVNCGPGH 357 (409)
Q Consensus 331 ~~gDD~Iai~s-----g~~n-V~I~n~~~~~g~ 357 (409)
..+|.+++ |.+| |+|++|.+....
T Consensus 257 ---hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ---SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ---CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred ---cccEEECchhhcccccccEEEEeeeccCCc
Confidence 34566665 3688 999999877643
No 72
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=95.93 E-value=0.09 Score=53.05 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=71.8
Q ss_pred EEEEeeeeEEEeceEEecCCCC----------eEEeecCccEEEEeEEEeCCCCCCCCCceeec-----------CcccE
Q 015319 265 LRFYGSFNVTVTGITIQNSPQC----------HLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQ-----------NSKDV 323 (409)
Q Consensus 265 i~~~~~~nv~I~gvti~ns~~~----------~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~-----------~s~nV 323 (409)
..+..++++.+++|+|+|.... .+. ...+.+.+.+|.|.. ..|=+... ....-
T Consensus 195 T~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~-v~gDr~~fy~C~f~G-----~QDTLy~~~~~~~~~~~~d~~gRq 268 (422)
T 3grh_A 195 VFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR-TDGDQVQINNVNILG-----RQNTFFVTNSGVQNRLETNRQPRT 268 (422)
T ss_dssp SEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE-ECCSSEEEEEEEEEC-----STTCEEECCCCTTCSCCSSCCCEE
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE-ecCCcEEEEeeEEEe-----ecceeeeccccccccccccccccE
Confidence 3445678999999999988432 133 467899999999998 45555442 23467
Q ss_pred EEEeeEEeeCCCeEEeCCCceeEEEEEEEEcC-C-----Ce-eEEEecCCCCCCCcEEEEEEEeEEEec
Q 015319 324 LIHTSNLACGDDCVSIQTGCSNVYVHNVNCGP-G-----HG-ISIGSLGKDNTKACVSNITVRDVMMHN 385 (409)
Q Consensus 324 ~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~-g-----~G-isIGs~g~~~~~~~v~nI~v~n~~~~~ 385 (409)
..++|+|...-|=|. +. -..+|++|++.. . .| |.-.+. ....-.-+.|.||+|..
T Consensus 269 yy~~CyIeGtVDFIF-G~--a~AvFe~C~I~s~~~~~~~~g~ITA~~t----~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 269 LVTNSYIEGDVDIVS-GR--GAVVFDNTEFRVVNSRTQQEAYVFAPAT----LSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EEESCEEEESEEEEE-ES--SEEEEESCEEEECCSSCSSCCEEEEECC----BTTCCCCEEEESCEEEE
T ss_pred EEEecEEeccccEEc-cC--ceEEEEeeEEEEecCCCCCceEEEecCC----CCCCCCEEEEECCEEEe
Confidence 889999987655443 32 467899998874 1 23 444322 12223568999999984
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=94.55 E-value=0.21 Score=48.74 Aligned_cols=84 Identities=10% Similarity=0.175 Sum_probs=64.8
Q ss_pred eecCccEEEEeEEEeCCCCC--CCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcCCCeeEEEecCCC
Q 015319 290 FDNCIGVVVHDVSVSSPGDS--PNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKD 367 (409)
Q Consensus 290 ~~~~~nV~I~n~~I~s~~~~--~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~g~GisIGs~g~~ 367 (409)
....++++++|++|.+.... ..+-+|.+ .+.++.++||.|....|.+..+.+ + .+++||.+.+.-.+=+|..
T Consensus 90 ~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~~--- 163 (319)
T 1gq8_A 90 AAVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN-R-QFFINCFIAGTVDFIFGNA--- 163 (319)
T ss_dssp EECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS-E-EEEESCEEEESSSCEEESC---
T ss_pred EEECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc-c-EEEEecEEEeeeeEEecCC---
Confidence 34689999999999986422 24456666 468899999999998899988874 3 5999999998766666642
Q ss_pred CCCCcEEEEEEEeEEEecc
Q 015319 368 NTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 368 ~~~~~v~nI~v~n~~~~~~ 386 (409)
..+|+||+++..
T Consensus 164 -------~a~f~~c~i~~~ 175 (319)
T 1gq8_A 164 -------AVVLQDCDIHAR 175 (319)
T ss_dssp -------EEEEESCEEEEC
T ss_pred -------cEEEEeeEEEEe
Confidence 488999998853
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=94.53 E-value=0.15 Score=49.66 Aligned_cols=84 Identities=6% Similarity=0.155 Sum_probs=65.0
Q ss_pred eecCccEEEEeEEEeCCCCC--CCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEcCCCeeEEEecCCC
Q 015319 290 FDNCIGVVVHDVSVSSPGDS--PNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKD 367 (409)
Q Consensus 290 ~~~~~nV~I~n~~I~s~~~~--~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~~g~GisIGs~g~~ 367 (409)
...+++++++|++|.+.... ..+-++.+ .+.++.++||.|....|.+..+.+ + .+++||.+++.-.+=+|..
T Consensus 86 ~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~~--- 159 (317)
T 1xg2_A 86 AAVGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ-R-QFYRDSYVTGTVDFIFGNA--- 159 (317)
T ss_dssp EECSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS-E-EEEESCEEEESSSCEEECC---
T ss_pred EEECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc-c-EEEEeeEEEeceeEEcCCc---
Confidence 34789999999999986432 24456666 468899999999998899988875 3 4999999998766666642
Q ss_pred CCCCcEEEEEEEeEEEecc
Q 015319 368 NTKACVSNITVRDVMMHNT 386 (409)
Q Consensus 368 ~~~~~v~nI~v~n~~~~~~ 386 (409)
..+|+||+++..
T Consensus 160 -------~avf~~c~i~~~ 171 (317)
T 1xg2_A 160 -------AVVFQKCQLVAR 171 (317)
T ss_dssp -------EEEEESCEEEEC
T ss_pred -------eEEEeeeEEEEe
Confidence 488999998853
No 75
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.01 E-value=0.33 Score=47.72 Aligned_cols=82 Identities=5% Similarity=0.099 Sum_probs=62.7
Q ss_pred cCccEEEEeEEEeCCCC----------------CCCCCceee-cCcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEEc
Q 015319 292 NCIGVVVHDVSVSSPGD----------------SPNTDGIHL-QNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCG 354 (409)
Q Consensus 292 ~~~nV~I~n~~I~s~~~----------------~~n~DGI~l-~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~~ 354 (409)
.+++++++|++|.+... ...+-++.+ ..+.++.++||.|...-|.+..+.+ ..+++||.++
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~g--r~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSGG--RSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECSS--EEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECCC--CEEEEcCEEE
Confidence 47899999999998641 112234521 3478999999999998899988864 7899999999
Q ss_pred CCCeeEEEecCCCCCCCcEEEEEEEeEEEec
Q 015319 355 PGHGISIGSLGKDNTKACVSNITVRDVMMHN 385 (409)
Q Consensus 355 ~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~ 385 (409)
+.-.+=+|.. ..+|+||+++-
T Consensus 172 G~vDFIFG~a----------~a~f~~c~i~~ 192 (342)
T 2nsp_A 172 GTVDFIFGDG----------TALFNNCDLVS 192 (342)
T ss_dssp ESEEEEEESS----------EEEEESCEEEE
T ss_pred eceEEEeCCc----------eEEEecCEEEE
Confidence 8877777752 57888888874
No 76
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=92.91 E-value=3.7 Score=36.80 Aligned_cols=126 Identities=14% Similarity=0.029 Sum_probs=77.8
Q ss_pred eeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEE
Q 015319 271 FNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHN 350 (409)
Q Consensus 271 ~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n 350 (409)
.+.+|+++.|-....-+||.. -+.+|+|+.... --.|.+.+.++..++|.+.-..+.+|=|.-..+.-.+.|+|
T Consensus 52 ~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwed----VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 125 (196)
T 3t9g_A 52 KGANLKNVIIGAPGCDGIHCY--GDNVVENVVWED----VGEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVKN 125 (196)
T ss_dssp TTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESS----CCSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEEE
T ss_pred CCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeee----eeceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEee
Confidence 355788888866666667764 356788887776 46777777766677888887777766665555667777877
Q ss_pred EEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEEEE
Q 015319 351 VNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQCY 406 (409)
Q Consensus 351 ~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~~~ 406 (409)
....+ .|--+-|.|. ..+=++|.++|+++.+....|.=.--.+......|+.
T Consensus 126 F~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l~rtdS~~~~~~~~n~~ 177 (196)
T 3t9g_A 126 FTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYHNLN 177 (196)
T ss_dssp EEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEEEECCCTTCEEEEEEEE
T ss_pred EEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEEEEcCCCCCEEEEecce
Confidence 76553 4433333331 1234788888888887644432222233434444443
No 77
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=91.34 E-value=1.1 Score=44.41 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=64.2
Q ss_pred ecCccEEEEeEEEeCCCC----------------CCCCCceeec-CcccEEEEeeEEeeCCCeEEeCCCceeEEEEEEEE
Q 015319 291 DNCIGVVVHDVSVSSPGD----------------SPNTDGIHLQ-NSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNC 353 (409)
Q Consensus 291 ~~~~nV~I~n~~I~s~~~----------------~~n~DGI~l~-~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n~~~ 353 (409)
...++++++|++|.+... ...+-++.+. .+.++.++||.|....|.+..+. ....++++|.+
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I 197 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEI 197 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEE
Confidence 356799999999998642 1223355554 47889999999999889998873 35889999999
Q ss_pred cCCCeeEEEecCCCCCCCcEEEEEEEeEEEec
Q 015319 354 GPGHGISIGSLGKDNTKACVSNITVRDVMMHN 385 (409)
Q Consensus 354 ~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~ 385 (409)
++.-.+=+|.. ..+|+||+++-
T Consensus 198 ~GtvDFIFG~a----------~a~f~~c~i~~ 219 (364)
T 3uw0_A 198 SGHVDFIFGSG----------ITVFDNCNIVA 219 (364)
T ss_dssp EESEEEEEESS----------EEEEESCEEEE
T ss_pred EcCCCEECCcc----------eEEEEeeEEEE
Confidence 99888877752 67888888874
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=89.14 E-value=5.5 Score=35.76 Aligned_cols=124 Identities=10% Similarity=0.071 Sum_probs=75.7
Q ss_pred eeEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCCCCCCCCceeecCcccEEEEeeEEeeCCCeEEeCCCceeEEEEE
Q 015319 271 FNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHN 350 (409)
Q Consensus 271 ~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~~~~n~DGI~l~~s~nV~I~n~~i~~gDD~Iai~sg~~nV~I~n 350 (409)
.+.+|+++.|-....-+||... +.+|+|+.... --.|.+.+.++..++|.+.-..+.+|=|.-..+.-.+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwed----VcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWED----VGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESS----CCSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeee----ccccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 3567888888666666777654 46777777776 46677777666667777777766666655555566677777
Q ss_pred EEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEeecCCCCeEEE
Q 015319 351 VNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQVMIPSGTQ 404 (409)
Q Consensus 351 ~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~~G~~g~v~~ 404 (409)
..... .|==.-|.|. ...-++|.++|+++.+....|.+....|....+.|
T Consensus 122 F~~~~-~GKl~RScGn---c~~~r~v~i~~v~~~~~k~~i~~~ds~gdtati~n 171 (197)
T 1ee6_A 122 FRADD-IGKLVRQNGG---TTYKVVMNVENCNISRVKDAILRTDSSTSTGRIVN 171 (197)
T ss_dssp CEEEE-EEEEEEECTT---CCSCEEEEEESCEEEEEEEEEEECCCTTCEEEEES
T ss_pred EEEcc-CCEEEEcCCC---CccceEEEEeceEEECceEEEEEecCCCCEEEEEe
Confidence 55432 3311222221 11237899999988886555544444555444443
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=88.23 E-value=20 Score=34.84 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=11.8
Q ss_pred CeeeeeceEEeCCCccc
Q 015319 200 GITIQGKGIIDGRGSVW 216 (409)
Q Consensus 200 nVtI~G~G~IdG~G~~~ 216 (409)
+.+|.| +++||.+..|
T Consensus 124 ~~~i~g-~t~Dgg~k~~ 139 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI 139 (344)
T ss_dssp TEEEES-SEEECTTCEE
T ss_pred ceeEec-ceEcCCCcEE
Confidence 456776 6889998775
No 80
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=88.01 E-value=2.9 Score=37.45 Aligned_cols=42 Identities=14% Similarity=0.137 Sum_probs=23.4
Q ss_pred eEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEeC
Q 015319 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSS 305 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s 305 (409)
++.|.+...++|.|--.+++..--+....+-.+.|.|+++..
T Consensus 89 A~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~nF~~~~ 130 (196)
T 3t9g_A 89 ALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVKNFTATN 130 (196)
T ss_dssp SEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEEEEEEEE
T ss_pred eeEEcCCCeEEEECCCccCCCceEEEECCCceEEEeeEEEcc
Confidence 444444445566666665554444555566666666666543
No 81
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=84.17 E-value=0.31 Score=48.97 Aligned_cols=40 Identities=28% Similarity=0.340 Sum_probs=28.9
Q ss_pred ccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCceEEEeCCc
Q 015319 115 FGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAESVFLVGPM 157 (409)
Q Consensus 115 ~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~~~~i 157 (409)
=||+|||++|||+|+.+|++++. ++.++=-.|.||.+..|
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~~---~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDTP---VGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHSC---TTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhccCC---CCeEEeCCCceEEeeeC
Confidence 48999999999999999997643 33444445556665543
No 82
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=63.03 E-value=24 Score=31.61 Aligned_cols=41 Identities=12% Similarity=0.134 Sum_probs=22.0
Q ss_pred eEEEEeeeeEEEeceEEecCCCCeEEeecCccEEEEeEEEe
Q 015319 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVS 304 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~ 304 (409)
++.|.+...++|.|--.+++..--+....+-.+.|.|+++.
T Consensus 85 A~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~nF~~~ 125 (197)
T 1ee6_A 85 ALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRNFRAD 125 (197)
T ss_dssp SEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEESCEEE
T ss_pred ccEEcCCCeEEEECCCccCCCccEEEecCCceEEEeeEEEc
Confidence 45555544555555555555444455555555666665553
No 83
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=61.73 E-value=7.7 Score=36.28 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=25.6
Q ss_pred EEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCc
Q 015319 110 FNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAE 149 (409)
Q Consensus 110 ~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G 149 (409)
+-+.++...........+.+.++++.|.+.+...|+||+-
T Consensus 23 va~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~ 62 (283)
T 3hkx_A 23 IALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPEL 62 (283)
T ss_dssp EEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTT
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCC
Confidence 3344444433223345666777888887777889999995
No 84
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=61.03 E-value=1.4e+02 Score=29.90 Aligned_cols=15 Identities=27% Similarity=0.324 Sum_probs=9.4
Q ss_pred eeEEEEeeeeEEEec
Q 015319 263 TALRFYGSFNVTVTG 277 (409)
Q Consensus 263 ~~i~~~~~~nv~I~g 277 (409)
..+.+..|.+|.|++
T Consensus 146 stL~I~~~~gv~v~~ 160 (543)
T 3riq_A 146 ATLRVNSANNIIFTH 160 (543)
T ss_dssp EEEEEESCEEEEEES
T ss_pred eEEEEeccCceEEec
Confidence 356667776666654
No 85
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=60.08 E-value=31 Score=33.83 Aligned_cols=23 Identities=26% Similarity=0.280 Sum_probs=12.6
Q ss_pred cCccEEEEeEEEeCCCCCCCCCceeec
Q 015319 292 NCIGVVVHDVSVSSPGDSPNTDGIHLQ 318 (409)
Q Consensus 292 ~~~nV~I~n~~I~s~~~~~n~DGI~l~ 318 (409)
.|-|+.+++.-..+ +--||+++.
T Consensus 268 RnYNLQFRdS~~l~----pVWDGFDLG 290 (559)
T 2vfm_A 268 RNYNLQFRDSVVIY----PVWDGFDLG 290 (559)
T ss_dssp CCBSCEEEEEEEES----CSSCSEEEC
T ss_pred cccceEeecceEEe----ecccccccc
Confidence 34455666655555 345666664
No 86
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=59.15 E-value=31 Score=33.82 Aligned_cols=22 Identities=27% Similarity=0.296 Sum_probs=12.0
Q ss_pred CccEEEEeEEEeCCCCCCCCCceeec
Q 015319 293 CIGVVVHDVSVSSPGDSPNTDGIHLQ 318 (409)
Q Consensus 293 ~~nV~I~n~~I~s~~~~~n~DGI~l~ 318 (409)
|-|+.+++.-..+ +--||+++.
T Consensus 272 nYNLQFRdS~~l~----pVWDGFDLG 293 (559)
T 2v5i_A 272 NYNLQFRDSVALS----PVWDGFDLG 293 (559)
T ss_dssp CBSCEEEEEEEES----CSSCSEECC
T ss_pred ccceEeecceEEe----ecccccccc
Confidence 4455566655555 345566654
No 87
>3zbd_A NSP1, P9, non-structural protein 1; viral protein, alphacoronavirus; 1.49A {Porcine transmissible gastroenteritiscoronavirus}
Probab=57.63 E-value=17 Score=29.38 Aligned_cols=82 Identities=11% Similarity=0.054 Sum_probs=44.7
Q ss_pred EeeccccCCCCCccHHHHHHHHHHHhhcC-CcEEEECCceEEEeCCcccCCCccccceEEEecc--eEEc-CCCCcccCC
Q 015319 112 VKDFGAKGNGVSDDTKAFEAAWAAACKVE-ASIMVVPAESVFLVGPMSFSGPYCQANIIFQLDG--TIIA-PTGSKDWGK 187 (409)
Q Consensus 112 V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~g-g~~v~vP~G~~y~~~~i~l~g~~~~s~~~l~l~G--tl~~-~~~~~~~~~ 187 (409)
+.|++...-|-. -++|.++ +..|..+| -+-+++|.|-.-++--+. .+..++-+.| ++.+ +.-+.+-+.
T Consensus 19 asDseIsa~G~~-~~dav~~-~s~~a~~GF~~crFV~~~lqD~v~G~~------~ddYV~~v~G~~~l~a~i~~f~~rp~ 90 (113)
T 3zbd_A 19 NEDYQVNVPSLP-IRDVLQE-IKYCYRNGFEGYVFVPEYCRDLVDCDR------KDHYVIGVLGNGVSDLKPVLLTEPSV 90 (113)
T ss_dssp CSSCCEECCCBC-HHHHHHH-HHHHHHHCCTTEEEEEGGGGGGEECSC------TTSBEEEEESSSSEEEEEECTTCCCT
T ss_pred ecccccccCCcC-HHHHHHH-HHHHHHcCCceEEEechhhhHHhcccC------cCCEEEEEecCceeEEEEEecCCCCc
Confidence 345555555555 5555554 45555555 578899988322222222 4566776665 3332 112222233
Q ss_pred CceeeEEEecccCe
Q 015319 188 GLLWWLDFTKLKGI 201 (409)
Q Consensus 188 g~~~~i~~~~~~nV 201 (409)
.+..||.+.+++.+
T Consensus 91 nL~Gwlv~SN~Nyv 104 (113)
T 3zbd_A 91 MLQGFIVRANCNGV 104 (113)
T ss_dssp TEEEEEEECCCCCE
T ss_pred ceeeEEEEeCCceE
Confidence 57789988886654
No 88
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=56.25 E-value=27 Score=34.86 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=12.7
Q ss_pred cCccEEEEeEEEeCCCCCCCCCceeec
Q 015319 292 NCIGVVVHDVSVSSPGDSPNTDGIHLQ 318 (409)
Q Consensus 292 ~~~nV~I~n~~I~s~~~~~n~DGI~l~ 318 (409)
.|-|+.++++.... +--|||++.
T Consensus 261 RnYnLqF~d~~~i~----~~~DG~Dl~ 283 (543)
T 3riq_A 261 RNYRLVFDNITTIQ----CYYDGIDVN 283 (543)
T ss_dssp CCBSCEEEEEEEES----CSSCSCEEC
T ss_pred ceeeEEEeccceEE----Eeecceecc
Confidence 34455666665555 345666664
No 89
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=53.47 E-value=43 Score=34.13 Aligned_cols=45 Identities=31% Similarity=0.358 Sum_probs=27.0
Q ss_pred eeEEEEEEEEcCCCeeEEEecCCCCCCCcEEEEEEEeEEEecccceEEEEee
Q 015319 344 SNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTW 395 (409)
Q Consensus 344 ~nV~I~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n~~~~~~~~Gi~Ikt~ 395 (409)
.|-.|.|..+.++-|+.+|--| .+..|+||+++|| ...|+.+-|+
T Consensus 424 ~nhlidn~~v~~slgvg~gmdg---~g~yvsnitv~dc----ag~g~~~~~~ 468 (666)
T 2xc1_A 424 LNHLIDNLLVRGALGVGFGMDG---KGMYVSNITVEDC----AGSGAYLLTH 468 (666)
T ss_dssp CCCEEEEEEEESCSSEEEEEEE---ESCEEEEEEEESC----SSEEEEEEEE
T ss_pred chhhhhhheeecccceeeeecC---CCceEeeeEehhc----cCcceEEeec
Confidence 4666777766666666666544 4556777777776 2344444444
No 90
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=48.34 E-value=83 Score=30.34 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=29.2
Q ss_pred ccccccCCCCCCCceeEEEEeeeeEEEeceEEecCCCCe
Q 015319 249 IRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCH 287 (409)
Q Consensus 249 ~~~~~~~~~~~~rp~~i~~~~~~nv~I~gvti~ns~~~~ 287 (409)
++.++.+-....+.-++.|..+.|..|+++.-+|-|+++
T Consensus 202 irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfg 240 (542)
T 2x3h_A 202 IRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFG 240 (542)
T ss_dssp EEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTE
T ss_pred cccceeccccccccceEEeccchhhhhhhhhhhcCCccc
Confidence 345554333333456889999999999999999999997
No 91
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=43.42 E-value=62 Score=31.39 Aligned_cols=107 Identities=10% Similarity=0.100 Sum_probs=50.7
Q ss_pred eEEEeceEEecCCCCeEEeecCccEEEEeEEEeCCC--CCCCCCceeec-CcccEEEEe-eE-E--------eeCCCeEE
Q 015319 272 NVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPG--DSPNTDGIHLQ-NSKDVLIHT-SN-L--------ACGDDCVS 338 (409)
Q Consensus 272 nv~I~gvti~ns~~~~i~~~~~~nV~I~n~~I~s~~--~~~n~DGI~l~-~s~nV~I~n-~~-i--------~~gDD~Ia 338 (409)
+.+|++|++.+.....+.+.. ..++|.+--..+.. ..-..|=|--. +.-.++|.+ .+ . +...+|-.
T Consensus 181 ~CtleNVwwedVcEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~gtv~I~~~~F~~~~~~GKl~RSCGnC~~ 259 (344)
T 3b4n_A 181 NCTIENVIWEDICEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSN 259 (344)
T ss_dssp EEEEEEEEESSCSSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCSSEEEEEETTEEEEEEEEEEEEECSSCTT
T ss_pred CeeEEEEeehhcccccceecC-ceEEEECchhccccccccCCCCcEEEeCCCccEEEecCceEEEccCCeEeEccCCccc
Confidence 578888888887777766663 34444444333320 00112333332 333466654 21 1 11212211
Q ss_pred eCCCceeEEEEEEEEcCCCeeEEEecCCCCCCCcEEEEEEEe
Q 015319 339 IQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRD 380 (409)
Q Consensus 339 i~sg~~nV~I~n~~~~~g~GisIGs~g~~~~~~~v~nI~v~n 380 (409)
+.+-++|+|+|+++.+..+--+|-...+++.+.|+|+.+.+
T Consensus 260 -~~~~R~v~i~nv~~~g~~~~lvGiN~NyGDtati~n~~i~~ 300 (344)
T 3b4n_A 260 -NGGPRFLTVTSATVNGTIDSIAGVNRNYGDVATISGLKIKN 300 (344)
T ss_dssp -CCCCEEEEESSEEEEEEEEEEEEEEGGGTCEEEECSEEETT
T ss_pred -CCcceEEEEeceEEeCCceEEEEEeCCCCCEEEEEEEEEec
Confidence 11357888888876432221123333345555566665553
No 92
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=42.97 E-value=26 Score=33.35 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=21.7
Q ss_pred CCCCCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEEC
Q 015319 103 PSHHSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVP 147 (409)
Q Consensus 103 ~~~~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP 147 (409)
.-...++|-|. | || |+-=.|-+.+=|..- ++.|-.+++|=
T Consensus 44 ~i~~aKVIAIa--G-KG-GVGKTTtavNLA~aL-A~~GkkVllID 83 (314)
T 3fwy_A 44 KITGAKVFAVY--G-KG-GIGKSTTSSNLSAAF-SILGKRVLQIG 83 (314)
T ss_dssp ---CCEEEEEE--C-ST-TSSHHHHHHHHHHHH-HHTTCCEEEEE
T ss_pred CCCCceEEEEE--C-CC-ccCHHHHHHHHHHHH-HHCCCeEEEEe
Confidence 34577888885 7 65 333456666655543 34455566653
No 93
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=38.07 E-value=26 Score=32.58 Aligned_cols=40 Identities=10% Similarity=0.163 Sum_probs=25.3
Q ss_pred EEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCc
Q 015319 110 FNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAE 149 (409)
Q Consensus 110 ~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G 149 (409)
+-+.++...........+.+.++++.|.+.+...|+||+-
T Consensus 23 va~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~ 62 (281)
T 3p8k_A 23 VQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEM 62 (281)
T ss_dssp EEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSS
T ss_pred EEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCC
Confidence 3344444432223345666777888777777789999994
No 94
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone, triacylglycerol hydrolase, all alpha helix protein, A/B hydrolase fold; 1.85A {Burkholderia glumae} SCOP: a.137.15.1
Probab=38.05 E-value=12 Score=36.33 Aligned_cols=19 Identities=16% Similarity=0.144 Sum_probs=8.0
Q ss_pred ccCCCCCccHHHHHHHHHH
Q 015319 117 AKGNGVSDDTKAFEAAWAA 135 (409)
Q Consensus 117 A~gdg~tDdT~Aiq~Ai~~ 135 (409)
.+.+|.---+.+++..+++
T Consensus 73 ~D~~G~Li~~~~lR~~FDY 91 (332)
T 2es4_D 73 LAAGGRLARTRAVREFFDY 91 (332)
T ss_dssp BCTTSSBCCSTHHHHHHHH
T ss_pred cCCCCCccccHHHHHHHHH
Confidence 3333333333345555544
No 95
>3dl8_E Protein-export membrane protein SECG; RECA-type ATPase membrane protein translocation protein- protein complex, ATP-binding, cell membrane; 7.50A {Aquifex aeolicus}
Probab=32.68 E-value=18 Score=29.27 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=11.6
Q ss_pred hhhHHHHHHHHHHHHhhcce
Q 015319 6 FRSLAFLFLIAFLVWSASFE 25 (409)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~ 25 (409)
|.++|..+.++|++++..+.
T Consensus 51 L~K~T~ilailF~v~sl~L~ 70 (107)
T 3dl8_E 51 LTKATYWLGALFLVLALLLS 70 (107)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56667666666655555443
No 96
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=29.73 E-value=1.7e+02 Score=29.30 Aligned_cols=113 Identities=13% Similarity=0.188 Sum_probs=64.6
Q ss_pred ceeEEEEeeeeEEEeceEEecCCCCeEEee-----------cCccEEEEeEEEeCCCCCCCCCceee-cCcccEEEEeeE
Q 015319 262 PTALRFYGSFNVTVTGITIQNSPQCHLKFD-----------NCIGVVVHDVSVSSPGDSPNTDGIHL-QNSKDVLIHTSN 329 (409)
Q Consensus 262 p~~i~~~~~~nv~I~gvti~ns~~~~i~~~-----------~~~nV~I~n~~I~s~~~~~n~DGI~l-~~s~nV~I~n~~ 329 (409)
..+|++ .++...+.++.|.- -+..+... ..-.--+++|.|... +|+ .+.-..++++|.
T Consensus 225 AVAL~v-~gDr~~fy~C~f~G-~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGt--------VDFIFG~a~AvFe~C~ 294 (422)
T 3grh_A 225 AVALRT-DGDQVQINNVNILG-RQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGD--------VDIVSGRGAVVFDNTE 294 (422)
T ss_dssp CCSEEE-CCSSEEEEEEEEEC-STTCEEECCCCTTCSCCSSCCCEEEEESCEEEES--------EEEEEESSEEEEESCE
T ss_pred eEEEEe-cCCcEEEEeeEEEe-ecceeeeccccccccccccccccEEEEecEEecc--------ccEEccCceEEEEeeE
Confidence 346665 45777888888873 35555542 344567888888873 333 123457888888
Q ss_pred EeeCC------CeEEeCC----CceeEEEEEEEEcC-CCe-eEEEecCCCCCC-CcEEEEEEEeEEEecc
Q 015319 330 LACGD------DCVSIQT----GCSNVYVHNVNCGP-GHG-ISIGSLGKDNTK-ACVSNITVRDVMMHNT 386 (409)
Q Consensus 330 i~~gD------D~Iai~s----g~~nV~I~n~~~~~-g~G-isIGs~g~~~~~-~~v~nI~v~n~~~~~~ 386 (409)
|..-. ..|+-.. .....+|.||++.. +.+ ..+|=- .... ...-.|+|.|++|...
T Consensus 295 I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~~~~~~yLGRP--W~~ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 295 FRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRS--LDVDANTNGQVVIRDSAINEG 362 (422)
T ss_dssp EEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEECSSSCBEEEEE--ECCSTTBCCEEEEESCEECTT
T ss_pred EEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeCCCCCEEcCCC--CCCcCCcCccEEEEeCcccCc
Confidence 86532 1233222 13457888888874 223 444421 0111 1234688888888864
No 97
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=24.43 E-value=16 Score=36.74 Aligned_cols=17 Identities=29% Similarity=0.768 Sum_probs=0.0
Q ss_pred cccCCCCCCCCCCCCCC
Q 015319 62 HNYHNGKPKPKPKPKPK 78 (409)
Q Consensus 62 ~~~~~~~~~~~~~~~~~ 78 (409)
+-||..++.|-|++++|
T Consensus 20 ~gy~~~~~~~~~~~~~~ 36 (422)
T 1pk8_A 20 NGYMTDLQRPQPPPPPP 36 (422)
T ss_dssp -----------------
T ss_pred cccccccCCCCCCCCCC
Confidence 45677777776554433
No 98
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=24.42 E-value=4.9e+02 Score=25.21 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=15.7
Q ss_pred eeEEEeceEEecCC---CCeEEeecCccEEEEeEEEeC
Q 015319 271 FNVTVTGITIQNSP---QCHLKFDNCIGVVVHDVSVSS 305 (409)
Q Consensus 271 ~nv~I~gvti~ns~---~~~i~~~~~~nV~I~n~~I~s 305 (409)
.+-+|+++++.... .++..--..+|+.|+++.|..
T Consensus 105 ~ghtI~nL~i~~~~~~GLFg~i~g~I~Nl~l~~~~i~g 142 (363)
T 3n6z_A 105 DSHVIKNFKCSAGDYPSFFGVLCGDCRNVGFVNASVSS 142 (363)
T ss_dssp EEEEEESCEECSSSSCSSSSEECEEEEEEEEEEEEEEC
T ss_pred CCeEEeeeEcCCCCceeEEEEeeEEEEEEEEEeeeEec
Confidence 34466666665321 222211234445555555544
No 99
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=23.73 E-value=17 Score=36.62 Aligned_cols=8 Identities=38% Similarity=0.704 Sum_probs=0.0
Q ss_pred CccccCCC
Q 015319 60 GHHNYHNG 67 (409)
Q Consensus 60 ~~~~~~~~ 67 (409)
||||||.+
T Consensus 5 ~~~~~~~~ 12 (433)
T 3v1v_A 5 HHHHHHSS 12 (433)
T ss_dssp --------
T ss_pred cccccccc
Confidence 34444433
No 100
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=23.10 E-value=49 Score=30.74 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=25.9
Q ss_pred ceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCc
Q 015319 108 SVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAE 149 (409)
Q Consensus 108 ~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G 149 (409)
.-+-+..-||-.| +.+.+.|++||+.+|.+||+|.|
T Consensus 85 ~dvv~~S~gaLad------~~l~~~L~~aA~~gg~~l~vpSG 120 (253)
T 1j5p_A 85 VNYIIISTSAFAD------EVFRERFFSELKNSPARVFFPSG 120 (253)
T ss_dssp SEEEECCGGGGGS------HHHHHHHHHHHHTCSCEEECCCT
T ss_pred CCEEEcChhhhcC------HHHHHHHHHHHHHCCCeEEecCC
Confidence 3343445555432 55677788999999999999999
No 101
>2lie_A CCL2 lectin; sugar binding protein; NMR {Coprinopsis cinerea} PDB: 2liq_A*
Probab=28.40 E-value=18 Score=30.40 Aligned_cols=43 Identities=12% Similarity=0.380 Sum_probs=26.6
Q ss_pred CCceEEEeeccccCC--CC-CccHHHHHHHHHHHhhcCCcEEEECCceEEE
Q 015319 106 HSSVFNVKDFGAKGN--GV-SDDTKAFEAAWAAACKVEASIMVVPAESVFL 153 (409)
Q Consensus 106 ~~~~~~V~d~GA~gd--g~-tDdT~Aiq~Ai~~a~~~gg~~v~vP~G~~y~ 153 (409)
.....-+.+|-+++. .. ..+.+-.|.||.. |...+++|++ -|.
T Consensus 59 a~q~Wil~~~D~n~q~~sIsp~~s~~sq~~wg~----gNv~~vlP~~-nyV 104 (153)
T 2lie_A 59 SEQAWILRSYDSNSNTWTISPVGSPNSQIGWGA----GNVPVVLPPN-NYV 104 (153)
Confidence 445667888877654 11 1245566777754 3467889998 454
No 102
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=21.96 E-value=78 Score=29.20 Aligned_cols=41 Identities=22% Similarity=0.260 Sum_probs=23.2
Q ss_pred CCCCceEEEeeccccCCCCCccHHHHHHHHHHHhhcCCcEEEECCc
Q 015319 104 SHHSSVFNVKDFGAKGNGVSDDTKAFEAAWAAACKVEASIMVVPAE 149 (409)
Q Consensus 104 ~~~~~~~~V~d~GA~gdg~tDdT~Aiq~Ai~~a~~~gg~~v~vP~G 149 (409)
....+++-|. |--|-|+| |-|++=|...| +.|-.+++|-..
T Consensus 38 ~~~~~vI~v~--~KGGvGKT--T~a~nLA~~La-~~G~~VlliD~D 78 (307)
T 3end_A 38 ITGAKVFAVY--GKGGIGKS--TTSSNLSAAFS-ILGKRVLQIGCD 78 (307)
T ss_dssp --CCEEEEEE--CSTTSSHH--HHHHHHHHHHH-HTTCCEEEEEES
T ss_pred cCCceEEEEE--CCCCccHH--HHHHHHHHHHH-HCCCeEEEEeCC
Confidence 3356788887 65556665 66666555433 345567666443
No 103
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=21.35 E-value=15 Score=23.63 Aligned_cols=18 Identities=28% Similarity=0.748 Sum_probs=10.0
Q ss_pred HHHHHHHhhcceeeeeccCCccccCC
Q 015319 14 LIAFLVWSASFETCNARRGRHWRHGR 39 (409)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (409)
.++|+++-+.|. +||..|
T Consensus 17 ~vif~~lg~tfl--------ywrgrr 34 (40)
T 2l9u_A 17 VVIFMMLGGTFL--------YWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHhCceeE--------EEcccc
Confidence 344555555665 676644
No 104
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=20.94 E-value=66 Score=28.20 Aligned_cols=15 Identities=0% Similarity=0.027 Sum_probs=7.6
Q ss_pred CcEEEEEEEeEEEec
Q 015319 371 ACVSNITVRDVMMHN 385 (409)
Q Consensus 371 ~~v~nI~v~n~~~~~ 385 (409)
...+++.++++.+.+
T Consensus 150 a~L~~a~f~~~~L~~ 164 (214)
T 2w7z_A 150 VTWXXLLLEACDLTE 164 (214)
T ss_dssp CEEEEEEEESCBCTT
T ss_pred CEEEEEEEEeccccc
Confidence 345555555555543
No 105
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=20.70 E-value=5.4e+02 Score=24.81 Aligned_cols=31 Identities=13% Similarity=0.315 Sum_probs=16.9
Q ss_pred eEEEEeeeeEEEeceEEecCCCCeEEeecCccEEE
Q 015319 264 ALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVV 298 (409)
Q Consensus 264 ~i~~~~~~nv~I~gvti~ns~~~~i~~~~~~nV~I 298 (409)
-+.+.+|+|.+| .|. .+.-.+.+.+|++.+|
T Consensus 63 ~v~I~nc~~c~I---~l~-~~~~sl~I~~c~nC~I 93 (352)
T 3bh7_B 63 QFLIQDCENCNI---YIF-DHSATVTIDDCTNCII 93 (352)
T ss_dssp CEEEESCBSCEE---EEC-SCBSCEEEESCBSCEE
T ss_pred cEEEecCcCCEE---EEe-cCCceEEEecCCCCEE
Confidence 356667776666 232 2344566666665543
Done!