BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015324
(409 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 217/449 (48%), Gaps = 77/449 (17%)
Query: 10 KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELG 69
K+ IDW + + D+VP EL + + PTP SDD +L + D++L
Sbjct: 16 KKDFVIDWSSAM-DKEDEVP-ELEIVNTTKPTPPPPPTFFSDDQTDSPKL---LTDRDLD 70
Query: 70 VRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGA----------------- 112
++ R K + + LPDKG+KI + LE+E +RR L G+
Sbjct: 71 EQLERKKAILT-LGPGLPDKGEKIRLKIADLEEEKQRRVLEGSKMEVDRSSKVVSSTSSG 129
Query: 113 ---VPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAF 169
+P + + S D Q + S+S+F++VF + D + AF
Sbjct: 130 SDVLPQGNAVSKDTSRGNADSKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAF 186
Query: 170 DKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--------------PFHKGDKSFN 215
KEL L C+RRK ++ GR+ V S W F G K
Sbjct: 187 GKELEDLG-CERRKHKA-------GRKPVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESK 238
Query: 216 SNGSQKDRASLTCPSHQSG---------------ENSSSCLPKKKESFEVLPSKNPRLRK 260
N K+ P S ++S ++ S+E PS++ R RK
Sbjct: 239 GNKKSKEPYGKKRPMESSTYSLIDDDDDDDDDDDNDTSGHETPREWSWEKSPSQSSRRRK 298
Query: 261 EQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICY 320
+ +++ DE EE++ S EQA E E + I YP+R DP V++C
Sbjct: 299 KSEDTVINVDE-------EEAQPST---VAEQAAELPEGL-QEDICYPTRDDPHFVQVCL 347
Query: 321 TDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDK 380
D+ LAP YLTSP+MNFY+R+LQ Q S +N+ DCHFFNTYFY KL +AV++KG DK
Sbjct: 348 KDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKLSDAVTYKGNDK 407
Query: 381 DSFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
D+FF++FRRWWKG+++F+K+Y+ IPIHE+
Sbjct: 408 DAFFVRFRRWWKGIDLFRKAYIFIPIHED 436
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 202/451 (44%), Gaps = 91/451 (20%)
Query: 10 KRKLNIDWEEVLPGRNDDVP-AELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQEL 68
K LNIDW++ L +++VP E+I PP S +P R + D EL
Sbjct: 14 KTMLNIDWDDALG--DEEVPELEIIATDKIPPREPTLS---GYEPAVSV---RSLRDNEL 65
Query: 69 GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQS 128
+ R + +++ L DKG+KI + LE E +RR + +GC L +
Sbjct: 66 DDHLKRQRSLLTRLGDKLADKGEKIRNRIGELEYEKQRRMFQQRTKMQDADNGCQILEKP 125
Query: 129 PSSDCFT-----------QRTPSPQIQSKSSFTSVFREKM-------------------- 157
SSD F Q T + S+S+F + F + +
Sbjct: 126 KSSDVFMRASTASKDTSGQGTSGSKDVSRSTFAAHFSDNLKMGPQPVKLVNDKLQDLGRG 185
Query: 158 ----EENRD-CREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDK 212
+ NRD E N + L L+ C + +N S S+ KGD+
Sbjct: 186 SWISKANRDSIIEKNNVWRSLPRLSKC------------KVSLKNFYSESKD---PKGDR 230
Query: 213 SFN-SNGSQKDRAS----LTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQN--LV 265
N + G K S L + + S + P ++ RK+ + ++
Sbjct: 231 RPNEAYGKGKPNESSPYLLVDDDDGDDDKVIGYETPRHWSLKASPLQSSSCRKKSDDKVI 290
Query: 266 LLDEDE--SP--VEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPES---VEI 318
LDEDE SP VE+A E EG + IYYPS + V++
Sbjct: 291 NLDEDEPLSPMVVEEACELPEG-----------------LPEDIYYPSSDQSDGRDLVQV 333
Query: 319 CYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGG 378
D+ L+P YLTSP++NFYIRY+Q ++ +CHFFNT+FY KL EAVS+KG
Sbjct: 334 SLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSYKGN 393
Query: 379 DKDSFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
D+D++F+KFRRWWKG ++F KSY+ IPIHE+
Sbjct: 394 DRDAYFVKFRRWWKGFDLFCKSYIFIPIHED 424
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAI-RDCHFFNTYFYSKLKEA- 372
S+ I TD+ L +L I++FY+RYL + N ++ D H FNT+FY++L
Sbjct: 346 SIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTSKD 405
Query: 373 -----VSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHE 408
+ H+G R+W + V++F K Y+++PI+E
Sbjct: 406 KDGKRLGHRG---------VRKWTQKVDLFHKKYIIVPINE 437
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKA-SDELVERSHIFSSF 794
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHE 408
FY L ++ D + RR W + +NIF K Y+ +P++E
Sbjct: 795 FYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNE 844
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 300 MIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCH 359
++ I YP + + D+ L +L I++FY++YL L+ + ++ + H
Sbjct: 744 LVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSH 802
Query: 360 FFNTYFYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHE 408
F+++FY L ++ D + + RR W + +NIF K Y+ +P++E
Sbjct: 803 IFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNE 857
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKA-SDELVERSHIFSSF 794
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHE 408
FY L ++ D + RR W + +NIF K Y+ +P++E
Sbjct: 795 FYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNE 844
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
+ YP + DP++V IC D+ L P ++ I++FYI YL+ Q + +
Sbjct: 384 VVYP-KGDPDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFF 442
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
+ D + F++ R+W + V++F K Y+ +P++
Sbjct: 443 RKLADLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVN 485
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L ++NFY+ L ++ + H F+T+FY KLK
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSK--KQGYPALHAFSTFFYPKLKS---- 447
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
GG + +RW KGVN+F++ VL+PIH
Sbjct: 448 -GG-----YQAVKRWTKGVNLFEQELVLVPIH 473
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
+ I DI L +L ++NFY+ L + Q P H F+T+FY KLK
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 448
Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
GG + +RW KGVN+F++ +L+PIH
Sbjct: 449 -----GG-----YQAVKRWTKGVNLFEQEIILVPIH 474
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
+ I DI L +L ++NFY+ L + Q P H F+T+FY KLK
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 448
Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
GG + +RW KGVN+F++ +L+PIH
Sbjct: 449 -----GG-----YQAVKRWTKGVNLFEQEIILVPIH 474
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 311 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIR--DCHFFNTYFYSK 368
VD S++IC D+ L+ +L I+NF YLQL +N + + FNT+FYS
Sbjct: 496 VDAFSIQICKKDLATLSGLHWLNDEIINF---YLQLICDRSNGDSKYPKIYAFNTFFYSN 552
Query: 369 LKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
+ KG + +RW + V+IF VL+P+H
Sbjct: 553 ----IVSKG------YASVKRWTRKVDIFAFDIVLVPVH 581
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 746 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSHIFSSF 804
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHE 408
FY L ++ D + + RR W + +NIF K Y+ +P++E
Sbjct: 805 FYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNE 854
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 250 VLPSKNPRLRKEQNLVLLD---------EDESPVEDASEESEGSLHIETTEQADEFAECM 300
L +N RL+++++ VL E E PV A E + S + T+ DEF E
Sbjct: 363 ALQLQNQRLQEQEHAVLDSVELHLRVPLEKEIPVTAAQETRKKSHQL--TDSEDEFPEIT 420
Query: 301 --IDAKIYYPSR------VDPESVEICYT--DINHLAPAAYLTSPIMNFYIRYLQLQASP 350
++ +I R V E+ + T DI L +L I+NFY+ L ++
Sbjct: 421 EEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK- 479
Query: 351 TNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
+ H FNT+F++KLK A + +RW K V++F +L+PIH
Sbjct: 480 -EKGFPSVHAFNTFFFTKLKTAG----------YQAVKRWTKKVDVFSVDILLVPIH 525
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 257 RLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESV 316
+LR +Q L D+DE E + + I E+ I YP +
Sbjct: 644 QLRSKQELQFFDDDEEAGESHT------IFIGPVEKL-----------IVYPPPPAKGGI 686
Query: 317 EICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHK 376
+ D++ L+ +L I++FY++YL L+ A R H F+++FY +L + +
Sbjct: 687 SVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADR-IHIFSSFFYKRLNQR-ERR 744
Query: 377 GGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHE 408
+ + I+ +R W + V+IF+K ++ +P++E
Sbjct: 745 NPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNE 782
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 301 IDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHF 360
++ I YP + + D++ L +L I++FY++YL L+ A R H
Sbjct: 651 VEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADR-IHI 709
Query: 361 FNTYFYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHE 408
F+++FY +L + + + + I+ +R W + V+IF+K ++ +P++E
Sbjct: 710 FSSFFYKRLNQR-ERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNE 762
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L ++NFY+ L ++ + H +T+FY KLK
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSK--KQGYPALHALSTFFYPKLKS---- 447
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
GG + +RW KGVN+F + VL+PIH
Sbjct: 448 -GG-----YQAVKRWTKGVNLFDQELVLVPIH 473
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L I+NFY+ L ++ + + H FNT+F++KLK A
Sbjct: 450 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK--EKGLPSVHAFNTFFFTKLKTAG-- 505
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
+ +RW K V++F +L+PIH
Sbjct: 506 --------YQAVKRWTKKVDVFSVDILLVPIH 529
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L I+NFY+ L ++ + + H FNT+F++KLK A
Sbjct: 451 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK--EKGLPSVHAFNTFFFTKLKTAG-- 506
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
+ +RW K V++F +L+PIH
Sbjct: 507 --------YQAVKRWTKKVDVFSVDILLVPIH 530
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 285 LHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYL 344
L T AD F + + YP + +P++V + DI L P ++ I++FYI+YL
Sbjct: 281 LGTSLTNLADSFED------LVYP-QGEPDAVVVRKQDIELLKPRRFINDTIIDFYIKYL 333
Query: 345 QLQASPTNRA-IRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVL 403
+ + SP R + F + L + G +++ + + ++W K V++F+K Y+
Sbjct: 334 KNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREA-YQRVQKWTKNVDLFEKDYIF 392
Query: 404 IPIH 407
IPI+
Sbjct: 393 IPIN 396
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 374
+++I + L P+A+L ++N Y+ L+ + + + CH+FNT+FY KL VS
Sbjct: 287 NIDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKL---VS 343
Query: 375 HKGGDKDSFFIKFRRWWK----GVNIFQKSYVLIPIH 407
G + F RRW G + + +PIH
Sbjct: 344 DSGYN----FKAVRRWTTQRKLGYALIDCDMIFVPIH 376
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 310 RVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKL 369
RV + + D+ L +L +MN Y L + P HFFN++FY KL
Sbjct: 374 RVSYKRHVLTMDDLGTLYGQNWLNDQVMNMYGD-LVMDTVPEK-----VHFFNSFFYDKL 427
Query: 370 KEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
+ KG D +RW K V+IF K +LIPIH E
Sbjct: 428 RT----KGYDG------VKRWTKNVDIFNKELLLIPIHLE 457
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L +MN Y L + P HFFN++FY KL+ KG D
Sbjct: 392 DLGTLYGQNWLNDQVMNMYGD-LVMDTVP-----EKVHFFNSFFYDKLRT----KGYDG- 440
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
+RW K V+IF K +LIPIH E
Sbjct: 441 -----VKRWTKNVDIFNKELLLIPIHLE 463
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 269 EDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAP 328
+DE PVE E+ L E E A A D+ I + +++I + L P
Sbjct: 256 QDEEPVEVVQREAFVPLSREE-ETAVRRAFSANDSNILVTHK--NSNIDITGKILRCLKP 312
Query: 329 AAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKL-KEAVSHKGGDKDSFFIKF 387
+L ++N Y+ L+ + + + CHFFNT+F++KL A + G
Sbjct: 313 GKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATGYNYG-------AV 365
Query: 388 RRWWK----GVNIFQKSYVLIPIH 407
RRW G ++ + IPIH
Sbjct: 366 RRWTSMKRLGYHLKDCDKIFIPIH 389
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L ++N Y L + A P HFFN++F+ +L KG
Sbjct: 573 DLATLDGQNWLNDQVINMYGE-LIMDAVPDK-----VHFFNSFFHRQLVT----KG---- 618
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
+ +RW K V++F+KS +LIPIH E
Sbjct: 619 --YNGVKRWTKKVDLFKKSLLLIPIHLE 644
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L ++N Y L + A P HFFN++F+ +L KG
Sbjct: 567 DLATLDGQNWLNDQVINMYGE-LIMDAVPDK-----VHFFNSFFHRQLVT----KG---- 612
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
+ +RW K V++F+KS +LIPIH E
Sbjct: 613 --YNGVKRWTKKVDLFKKSLLLIPIHLE 638
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L ++N Y L + A P HFFN++F+ +L KG
Sbjct: 573 DLATLDGQNWLNDQVINMYGE-LIMDAVPDK-----VHFFNSFFHRQLVT----KG---- 618
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEE 409
+ +RW K V++F+KS +LIPIH E
Sbjct: 619 --YNGVKRWTKKVDLFKKSLLLIPIHLE 644
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 374
++ I D++ L +L ++NFY+ + + S + ++ H FNT+FY+ L+
Sbjct: 376 NIPITLKDLHTLRNRQWLNDEVINFYMNLIS-ERSKIDSSLPRVHGFNTFFYTSLQR--- 431
Query: 375 HKGGDKDSFFIKFRRWWKG--VNIFQKSYVLIPIH 407
+G + RRW K VNI V IP+H
Sbjct: 432 -RG------YAGVRRWAKKARVNIADMDAVFIPVH 459
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 374
+++I + L P +L + N Y+ L+ + + + CHFFNT+FY KL VS
Sbjct: 138 NIDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKL---VS 194
Query: 375 HKGGDKDSFFIKFRRWWK----GVNIFQKSYVLIPIH 407
G + + RW G ++ + +PIH
Sbjct: 195 GSGYN----YKAVSRWTTKRKLGYDLIDCDIIFVPIH 227
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 312 DPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIR--DCHFFNTYFYSKL 369
D S I D L ++ I++F+ ++ +++S I+ H +++FY+KL
Sbjct: 438 DGSSYTITNQDFKCLFNKDWVNDSILDFFTKFY-IESSIEKSIIKREQVHLMSSFFYTKL 496
Query: 370 KEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
+S+ ++ ++W ++F K YV+IPI+
Sbjct: 497 ---ISNPAD----YYSNVKKWVNNTDLFSKKYVVIPIN 527
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 17/82 (20%)
Query: 311 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 370
++ +++EI D LAP +L I+ F+++Y++ +++P A FN++FY+ L
Sbjct: 428 MNRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIE-KSTPNTVA------FNSFFYTNLS 480
Query: 371 EAVSHKGGDKDSFFIKFRRWWK 392
E ++G RRW K
Sbjct: 481 ER-GYQG---------VRRWMK 492
>sp|Q9ZA21|HGPA_HAEIF Hemoglobin and hemoglobin-haptoglobin-binding protein A
OS=Haemophilus influenzae GN=hgpA PE=1 SV=1
Length = 1077
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 157 MEENRDCREANAFDKELSILAHCDRRKMRSDG---------DLSQRGRQNVRSSSRKWPF 207
++ NRD + A KELS+ H D + + DLS +GR++V S+ PF
Sbjct: 832 IQPNRDLQPETAKTKELSLTVHNDMGYITTSVFDTRYQNFIDLSYQGRRDVHGHSKLIPF 891
Query: 208 H 208
H
Sbjct: 892 H 892
>sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus
GN=Polr2b PE=2 SV=2
Length = 1174
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
+YYP + + + Y L PA + + Y Y Q + NR+ D FF +
Sbjct: 751 LYYPQKPLVTTRSMEYLRFREL-PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSV 809
Query: 365 FYSKLKEAVSHKGGDKDSFF 384
FY KE S KG D++ F
Sbjct: 810 FYRSYKEQESKKGFDQEEVF 829
>sp|P30876|RPB2_HUMAN DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens
GN=POLR2B PE=1 SV=1
Length = 1174
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
+YYP + + + Y L PA + + Y Y Q + NR+ D FF +
Sbjct: 751 LYYPQKPLVTTRSMEYLRFREL-PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSV 809
Query: 365 FYSKLKEAVSHKGGDKDSFF 384
FY KE S KG D++ F
Sbjct: 810 FYRSYKEQESKKGFDQEEVF 829
>sp|P27884|CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A
OS=Oryctolagus cuniculus GN=CACNA1A PE=1 SV=1
Length = 2424
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 76 KDTYSKVRHCLPDKGKKILATVTRLEKECERRR 108
+D YS HCLP +G+ A++ RL E +RRR
Sbjct: 2080 QDGYSDSEHCLPMEGQARAASMPRLPAENQRRR 2112
>sp|Q8C633|CABS1_MOUSE Calcium-binding and spermatid-specific protein 1 OS=Mus musculus
GN=Cabs1 PE=1 SV=1
Length = 391
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 60 DRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDI 119
D IP E I D + V C PD TV +L E+ +L DI
Sbjct: 31 DNTIPKSE--TTITSEGDHVTSVNDCTPDG--DFSTTVNKLTPTKEKLKLED------DI 80
Query: 120 DGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVF 153
+GC KLT P + T T +P + K S T F
Sbjct: 81 EGCLKLTTLPEKE-ITTPTETPNSKPKGSITENF 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,132,227
Number of Sequences: 539616
Number of extensions: 7175740
Number of successful extensions: 20057
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 19929
Number of HSP's gapped (non-prelim): 171
length of query: 409
length of database: 191,569,459
effective HSP length: 120
effective length of query: 289
effective length of database: 126,815,539
effective search space: 36649690771
effective search space used: 36649690771
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 62 (28.5 bits)