Query 015325
Match_columns 409
No_of_seqs 170 out of 1973
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 05:15:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015325.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015325hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 6.1E-56 1.3E-60 422.1 36.1 343 59-408 34-398 (537)
2 KOG1177 Long chain fatty acid 100.0 1E-56 2.2E-61 400.5 26.0 364 38-408 50-451 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 5.4E-55 1.2E-59 428.7 36.4 365 37-408 10-391 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 1.7E-55 3.6E-60 416.9 30.7 360 38-408 8-387 (528)
5 PLN02574 4-coumarate--CoA liga 100.0 5.6E-54 1.2E-58 425.8 42.5 392 9-408 12-420 (560)
6 PLN02614 long-chain acyl-CoA s 100.0 5.7E-54 1.2E-58 431.4 35.1 362 38-408 45-487 (666)
7 PRK06334 long chain fatty acid 100.0 1.8E-53 3.8E-58 419.8 35.4 360 38-408 19-399 (539)
8 PTZ00342 acyl-CoA synthetase; 100.0 2.6E-53 5.6E-58 426.3 35.5 363 37-408 60-560 (746)
9 PRK07788 acyl-CoA synthetase; 100.0 5E-53 1.1E-57 418.6 33.8 355 39-408 50-421 (549)
10 PLN02246 4-coumarate--CoA liga 100.0 6.2E-52 1.4E-56 409.6 40.5 376 22-408 10-402 (537)
11 PLN02861 long-chain-fatty-acid 100.0 1.3E-52 2.8E-57 421.9 35.3 361 38-408 43-484 (660)
12 PLN02736 long-chain acyl-CoA s 100.0 8.6E-52 1.9E-56 416.5 37.4 363 35-408 41-477 (651)
13 PLN02654 acetate-CoA ligase 100.0 7.6E-52 1.6E-56 416.7 35.2 365 35-408 84-501 (666)
14 PLN02860 o-succinylbenzoate-Co 100.0 1.2E-51 2.7E-56 409.4 34.9 360 35-408 4-404 (563)
15 PRK08314 long-chain-fatty-acid 100.0 3E-51 6.6E-56 405.9 37.1 357 38-408 10-403 (546)
16 PF00501 AMP-binding: AMP-bind 100.0 7.2E-53 1.6E-57 403.8 24.1 352 45-407 2-377 (417)
17 PRK13295 cyclohexanecarboxylat 100.0 4.8E-51 1E-55 404.1 37.9 363 38-408 24-411 (547)
18 COG1022 FAA1 Long-chain acyl-C 100.0 5.6E-52 1.2E-56 398.1 30.1 350 38-409 16-440 (613)
19 PLN02330 4-coumarate--CoA liga 100.0 1.3E-50 2.8E-55 400.9 40.4 367 37-408 27-407 (546)
20 TIGR02316 propion_prpE propion 100.0 7.5E-51 1.6E-55 408.2 38.3 366 35-408 48-459 (628)
21 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.2E-50 2.5E-55 407.2 38.7 365 35-408 53-463 (625)
22 PTZ00237 acetyl-CoA synthetase 100.0 2.6E-51 5.6E-56 411.6 33.8 372 30-408 51-481 (647)
23 PRK07529 AMP-binding domain pr 100.0 9.1E-51 2E-55 407.4 37.4 367 31-408 18-436 (632)
24 PLN02387 long-chain-fatty-acid 100.0 7.7E-51 1.7E-55 410.7 33.4 362 38-408 58-521 (696)
25 PRK07638 acyl-CoA synthetase; 100.0 2.7E-50 5.8E-55 393.5 35.6 351 38-407 1-351 (487)
26 PRK00174 acetyl-CoA synthetase 100.0 3.7E-50 8E-55 404.3 36.8 365 35-408 63-471 (637)
27 PRK13382 acyl-CoA synthetase; 100.0 3.1E-50 6.7E-55 397.1 35.2 352 38-404 43-406 (537)
28 PRK06060 acyl-CoA synthetase; 100.0 1.6E-50 3.5E-55 411.0 33.5 350 38-408 4-358 (705)
29 PRK06839 acyl-CoA synthetase; 100.0 3.2E-50 7E-55 394.1 34.1 354 39-408 3-362 (496)
30 PRK07656 long-chain-fatty-acid 100.0 5.4E-50 1.2E-54 394.1 34.6 359 38-408 5-382 (513)
31 PRK06145 acyl-CoA synthetase; 100.0 1.2E-49 2.6E-54 390.0 36.7 359 38-408 2-364 (497)
32 PRK03640 O-succinylbenzoic aci 100.0 1.3E-49 2.9E-54 388.4 35.7 350 38-408 2-351 (483)
33 PRK05677 long-chain-fatty-acid 100.0 2E-49 4.3E-54 393.7 37.5 361 37-408 23-423 (562)
34 PRK09274 peptide synthase; Pro 100.0 5.9E-50 1.3E-54 397.0 33.0 357 38-408 6-406 (552)
35 PRK08180 feruloyl-CoA synthase 100.0 1.3E-49 2.8E-54 398.3 35.6 356 37-408 38-430 (614)
36 PRK04319 acetyl-CoA synthetase 100.0 1.7E-49 3.7E-54 394.7 36.1 361 37-408 41-423 (570)
37 KOG1256 Long-chain acyl-CoA sy 100.0 6.8E-50 1.5E-54 378.4 30.0 365 35-408 72-517 (691)
38 PRK07786 long-chain-fatty-acid 100.0 4.8E-49 1E-53 389.4 37.3 360 37-408 16-390 (542)
39 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.8E-49 8.3E-54 388.3 36.3 355 40-408 2-373 (515)
40 PTZ00216 acyl-CoA synthetase; 100.0 6E-50 1.3E-54 405.1 31.4 360 37-408 68-526 (700)
41 PRK10524 prpE propionyl-CoA sy 100.0 4.5E-49 9.7E-54 396.1 37.0 366 35-408 49-460 (629)
42 PLN03052 acetate--CoA ligase; 100.0 5.5E-49 1.2E-53 397.3 37.4 364 35-406 171-572 (728)
43 PRK07769 long-chain-fatty-acid 100.0 2.4E-49 5.3E-54 397.9 34.1 357 38-408 21-437 (631)
44 PRK08315 AMP-binding domain pr 100.0 5.4E-49 1.2E-53 390.9 36.2 365 38-408 16-417 (559)
45 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 8.3E-49 1.8E-53 387.4 36.8 364 37-408 21-409 (538)
46 PRK12467 peptide synthase; Pro 100.0 1.1E-49 2.5E-54 459.3 35.3 354 38-408 3095-3454(3956)
47 PRK12582 acyl-CoA synthetase; 100.0 3.9E-49 8.4E-54 395.6 34.7 365 28-408 39-442 (624)
48 PRK05605 long-chain-fatty-acid 100.0 7.5E-49 1.6E-53 390.7 36.4 362 38-408 32-436 (573)
49 PRK05857 acyl-CoA synthetase; 100.0 5E-49 1.1E-53 388.8 34.2 361 38-408 14-393 (540)
50 PRK08316 acyl-CoA synthetase; 100.0 8.2E-49 1.8E-53 386.6 35.4 360 38-408 11-386 (523)
51 PRK07514 malonyl-CoA synthase; 100.0 1.4E-48 3.1E-53 383.1 36.5 356 38-408 3-367 (504)
52 PRK10252 entF enterobactin syn 100.0 5.6E-49 1.2E-53 425.5 35.9 353 38-408 458-821 (1296)
53 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2.1E-48 4.6E-53 383.6 36.6 361 35-408 20-398 (527)
54 PRK06087 short chain acyl-CoA 100.0 2.8E-48 6E-53 384.6 37.3 359 38-408 23-400 (547)
55 PLN02430 long-chain-fatty-acid 100.0 5.4E-49 1.2E-53 395.0 32.5 362 38-408 42-484 (660)
56 PRK03584 acetoacetyl-CoA synth 100.0 2.9E-48 6.2E-53 391.6 37.5 365 30-408 79-484 (655)
57 PRK13383 acyl-CoA synthetase; 100.0 2E-48 4.3E-53 382.8 35.3 352 37-407 34-389 (516)
58 PRK06155 crotonobetaine/carnit 100.0 4.8E-48 1E-52 381.8 38.1 355 38-408 21-391 (542)
59 PRK06187 long-chain-fatty-acid 100.0 2.3E-48 4.9E-53 383.3 34.9 359 37-407 5-385 (521)
60 PRK05852 acyl-CoA synthetase; 100.0 3.4E-48 7.4E-53 382.7 35.3 363 38-408 16-399 (534)
61 PRK12316 peptide synthase; Pro 100.0 1.1E-48 2.3E-53 457.8 36.3 356 38-408 511-870 (5163)
62 PRK12492 long-chain-fatty-acid 100.0 5.7E-48 1.2E-52 383.2 35.9 360 38-408 24-431 (562)
63 PRK12467 peptide synthase; Pro 100.0 1E-48 2.3E-53 451.4 35.3 357 38-408 1574-1937(3956)
64 PRK12476 putative fatty-acid-- 100.0 2.7E-48 5.9E-53 388.8 33.8 356 38-408 34-448 (612)
65 PRK05851 long-chain-fatty-acid 100.0 1.3E-48 2.7E-53 384.6 30.9 357 38-408 1-391 (525)
66 TIGR01734 D-ala-DACP-lig D-ala 100.0 4.6E-48 9.9E-53 379.4 34.4 355 39-408 1-361 (502)
67 PRK08633 2-acyl-glycerophospho 100.0 3.1E-48 6.8E-53 415.5 35.9 363 37-408 614-1006(1146)
68 PRK08043 bifunctional acyl-[ac 100.0 3.1E-48 6.6E-53 394.6 32.5 352 37-406 203-570 (718)
69 PRK07470 acyl-CoA synthetase; 100.0 9.7E-48 2.1E-52 379.2 34.7 362 36-408 5-385 (528)
70 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.7E-47 3.7E-52 384.6 37.1 360 35-408 84-485 (652)
71 PRK12583 acyl-CoA synthetase; 100.0 1.7E-47 3.7E-52 380.1 36.6 364 38-408 18-418 (558)
72 PRK13388 acyl-CoA synthetase; 100.0 2E-47 4.4E-52 377.2 36.5 351 38-408 3-371 (540)
73 PRK07059 Long-chain-fatty-acid 100.0 1.6E-47 3.6E-52 379.8 35.9 363 35-408 20-425 (557)
74 PRK09088 acyl-CoA synthetase; 100.0 1.6E-47 3.5E-52 374.1 34.5 339 56-408 9-351 (488)
75 PRK06178 acyl-CoA synthetase; 100.0 3.1E-47 6.8E-52 378.6 37.1 382 18-408 14-433 (567)
76 COG1021 EntE Peptide arylation 100.0 4.4E-49 9.6E-54 344.2 20.7 361 35-408 25-404 (542)
77 PRK12316 peptide synthase; Pro 100.0 4.9E-48 1.1E-52 452.3 35.7 356 38-408 2003-2364(5163)
78 PRK06188 acyl-CoA synthetase; 100.0 2.6E-47 5.5E-52 375.9 35.5 359 38-407 12-383 (524)
79 TIGR03443 alpha_am_amid L-amin 100.0 7.4E-48 1.6E-52 418.3 34.7 362 38-408 236-640 (1389)
80 PRK10946 entE enterobactin syn 100.0 3.4E-47 7.4E-52 375.5 36.1 359 35-408 22-399 (536)
81 PRK08751 putative long-chain f 100.0 5.7E-47 1.2E-51 376.3 37.2 379 19-408 4-427 (560)
82 PRK05691 peptide synthase; Val 100.0 1.2E-47 2.7E-52 446.0 36.7 354 38-408 1131-1488(4334)
83 PRK07867 acyl-CoA synthetase; 100.0 1.2E-46 2.6E-51 370.6 37.0 351 38-408 5-372 (529)
84 PRK08008 caiC putative crotono 100.0 7.6E-47 1.7E-51 371.9 35.7 360 38-408 7-388 (517)
85 TIGR02262 benz_CoA_lig benzoat 100.0 1.6E-46 3.4E-51 368.9 37.5 356 38-407 3-374 (508)
86 PRK05691 peptide synthase; Val 100.0 1.3E-47 2.8E-52 445.8 34.7 353 38-408 3720-4085(4334)
87 PRK06164 acyl-CoA synthetase; 100.0 4.5E-47 9.8E-52 375.5 33.1 360 38-408 10-396 (540)
88 PRK04813 D-alanine--poly(phosp 100.0 8.3E-47 1.8E-51 370.6 34.3 356 38-408 2-363 (503)
89 PRK06710 long-chain-fatty-acid 100.0 2.2E-46 4.8E-51 372.2 37.7 360 38-408 24-422 (563)
90 PRK07008 long-chain-fatty-acid 100.0 8.1E-47 1.7E-51 373.1 34.3 360 38-407 10-402 (539)
91 PLN03102 acyl-activating enzym 100.0 1.4E-46 2.9E-51 374.0 35.6 359 38-408 14-411 (579)
92 TIGR03205 pimA dicarboxylate-- 100.0 1.1E-45 2.3E-50 365.5 38.5 360 38-408 21-412 (541)
93 PRK13390 acyl-CoA synthetase; 100.0 1.9E-46 4.1E-51 367.6 32.9 341 56-408 11-367 (501)
94 PRK06018 putative acyl-CoA syn 100.0 4.9E-46 1.1E-50 367.9 35.0 359 37-406 9-401 (542)
95 PRK05620 long-chain-fatty-acid 100.0 6.6E-46 1.4E-50 369.5 35.4 362 37-408 9-404 (576)
96 PRK07787 acyl-CoA synthetase; 100.0 8.3E-46 1.8E-50 360.2 33.1 324 56-408 14-340 (471)
97 PLN02479 acetate-CoA ligase 100.0 1.8E-45 3.9E-50 365.5 35.7 360 37-408 19-421 (567)
98 PRK08279 long-chain-acyl-CoA s 100.0 1.1E-45 2.5E-50 369.6 33.7 356 35-407 34-422 (600)
99 PRK08974 long-chain-fatty-acid 100.0 7.7E-45 1.7E-49 360.9 36.8 360 38-407 23-422 (560)
100 TIGR01733 AA-adenyl-dom amino 100.0 2.7E-45 5.9E-50 350.4 32.0 331 71-408 1-337 (408)
101 PRK09192 acyl-CoA synthetase; 100.0 4.8E-45 1E-49 363.4 32.6 358 38-407 21-429 (579)
102 PRK05850 acyl-CoA synthetase; 100.0 4E-45 8.8E-50 364.3 32.0 356 38-408 1-416 (578)
103 PRK13391 acyl-CoA synthetase; 100.0 3.4E-44 7.5E-49 352.4 35.0 341 56-408 11-371 (511)
104 PRK06814 acylglycerophosphoeth 100.0 2.9E-44 6.2E-49 383.9 36.1 355 37-408 630-1000(1140)
105 PRK07798 acyl-CoA synthetase; 100.0 7.3E-44 1.6E-48 352.3 36.3 355 38-408 3-395 (533)
106 PRK08162 acyl-CoA synthetase; 100.0 8.7E-44 1.9E-48 352.4 34.9 360 38-408 18-407 (545)
107 PRK08276 long-chain-fatty-acid 100.0 7.6E-44 1.7E-48 349.4 33.6 332 66-408 8-359 (502)
108 PRK12406 long-chain-fatty-acid 100.0 1E-43 2.2E-48 349.0 34.1 338 59-408 3-370 (509)
109 KOG1179 Very long-chain acyl-C 100.0 1.4E-43 3.1E-48 322.9 31.7 357 38-407 77-471 (649)
110 KOG1180 Acyl-CoA synthetase [L 100.0 7.8E-45 1.7E-49 329.8 22.7 372 29-409 32-503 (678)
111 PRK07768 long-chain-fatty-acid 100.0 1.4E-43 3E-48 350.9 33.4 353 39-407 3-404 (545)
112 PRK07868 acyl-CoA synthetase; 100.0 4.9E-43 1.1E-47 365.1 35.0 345 35-398 444-818 (994)
113 PRK09029 O-succinylbenzoic aci 100.0 5.8E-43 1.3E-47 339.1 31.3 320 39-408 3-323 (458)
114 PRK07445 O-succinylbenzoic aci 100.0 2.6E-43 5.6E-48 339.5 27.3 301 68-407 18-319 (452)
115 PLN03051 acyl-activating enzym 100.0 2.1E-42 4.6E-47 338.2 28.5 303 102-407 1-339 (499)
116 TIGR01923 menE O-succinylbenzo 100.0 2E-41 4.2E-46 326.6 30.7 310 71-407 1-310 (436)
117 KOG1175 Acyl-CoA synthetase [L 100.0 2.5E-40 5.4E-45 314.4 28.1 373 27-408 53-463 (626)
118 PRK08308 acyl-CoA synthetase; 100.0 8.8E-40 1.9E-44 312.6 31.5 287 61-397 2-289 (414)
119 PTZ00297 pantothenate kinase; 100.0 3.3E-37 7.2E-42 322.2 30.7 333 37-396 426-832 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 4.7E-36 1E-40 302.7 32.1 354 38-408 227-586 (642)
121 TIGR03089 conserved hypothetic 100.0 6.3E-27 1.4E-31 203.2 20.9 205 44-283 2-227 (227)
122 PRK07824 O-succinylbenzoic aci 99.9 3.9E-26 8.4E-31 214.2 20.7 191 188-408 31-226 (358)
123 TIGR02155 PA_CoA_ligase phenyl 99.9 5.9E-24 1.3E-28 203.6 17.2 201 190-397 73-281 (422)
124 KOG3628 Predicted AMP-binding 99.9 1.3E-22 2.8E-27 197.7 26.2 364 38-406 770-1197(1363)
125 TIGR03335 F390_ftsA coenzyme F 99.9 1.8E-22 4E-27 193.6 16.5 197 190-397 84-286 (445)
126 TIGR02372 4_coum_CoA_lig 4-cou 99.9 4.5E-22 9.7E-27 186.4 15.2 168 192-375 95-265 (386)
127 COG1541 PaaK Coenzyme F390 syn 99.8 6.2E-19 1.3E-23 161.6 15.8 202 189-396 87-293 (438)
128 KOG1178 Non-ribosomal peptide 99.6 3.3E-15 7.2E-20 150.4 16.3 302 39-351 37-371 (1032)
129 KOG3628 Predicted AMP-binding 99.6 9E-14 1.9E-18 136.8 17.1 355 39-405 95-546 (1363)
130 TIGR02304 aden_form_hyp probab 99.2 4E-10 8.7E-15 106.4 13.7 145 194-348 101-251 (430)
131 PF04443 LuxE: Acyl-protein sy 98.9 5.9E-08 1.3E-12 89.7 15.5 197 190-398 87-312 (365)
132 COG1541 PaaK Coenzyme F390 syn 96.2 0.057 1.2E-06 50.9 11.1 87 69-157 109-197 (438)
133 PLN02247 indole-3-acetic acid- 95.4 1.4 2.9E-05 43.9 17.3 41 306-346 292-333 (606)
134 PF03321 GH3: GH3 auxin-respon 94.9 0.17 3.6E-06 50.1 9.5 88 306-400 266-368 (528)
135 PLN02620 indole-3-acetic acid- 94.4 0.75 1.6E-05 45.6 12.4 41 306-346 303-344 (612)
136 TIGR02155 PA_CoA_ligase phenyl 88.7 3.3 7.2E-05 39.7 9.7 86 69-156 94-181 (422)
137 TIGR03335 F390_ftsA coenzyme F 87.8 5 0.00011 38.8 10.3 81 68-152 104-186 (445)
138 TIGR03089 conserved hypothetic 75.9 18 0.00039 31.3 8.2 54 87-143 171-226 (227)
139 PLN02736 long-chain acyl-CoA s 74.3 42 0.00091 34.3 11.8 100 211-315 78-180 (651)
140 PF00501 AMP-binding: AMP-bind 73.3 26 0.00057 33.2 9.5 90 189-287 7-99 (417)
141 PRK06187 long-chain-fatty-acid 72.3 44 0.00095 32.7 11.1 97 56-157 166-270 (521)
142 KOG1177 Long chain fatty acid 70.9 27 0.0006 33.6 8.4 107 209-316 75-198 (596)
143 COG0399 WecE Predicted pyridox 68.3 26 0.00057 32.9 7.8 65 79-148 59-128 (374)
144 PTZ00342 acyl-CoA synthetase; 68.3 37 0.00081 35.4 9.8 118 190-316 74-208 (746)
145 PRK07656 long-chain-fatty-acid 68.2 46 0.001 32.6 10.2 97 56-157 165-270 (513)
146 PRK11761 cysM cysteine synthas 65.4 57 0.0012 29.6 9.4 89 58-150 28-117 (296)
147 TIGR03590 PseG pseudaminic aci 65.1 69 0.0015 28.7 9.8 85 77-168 18-111 (279)
148 TIGR02370 pyl_corrinoid methyl 64.9 85 0.0018 26.5 11.0 88 236-325 86-183 (197)
149 PRK09274 peptide synthase; Pro 64.6 55 0.0012 32.5 10.0 99 190-289 19-121 (552)
150 PLN03013 cysteine synthase 64.4 58 0.0013 31.3 9.4 91 58-151 139-230 (429)
151 COG1663 LpxK Tetraacyldisaccha 63.6 1.2E+02 0.0026 28.0 10.7 164 123-295 122-298 (336)
152 PRK06334 long chain fatty acid 63.6 74 0.0016 31.6 10.7 83 211-295 45-128 (539)
153 PRK08315 AMP-binding domain pr 62.8 83 0.0018 31.3 11.0 83 68-154 217-301 (559)
154 cd01445 TST_Repeats Thiosulfat 62.2 20 0.00043 28.3 5.1 41 80-121 81-124 (138)
155 PRK08316 acyl-CoA synthetase; 62.0 74 0.0016 31.2 10.4 86 210-296 35-123 (523)
156 PLN02387 long-chain-fatty-acid 61.8 64 0.0014 33.4 10.1 102 211-317 106-210 (696)
157 PRK06839 acyl-CoA synthetase; 60.0 1.1E+02 0.0024 29.7 11.1 96 190-295 15-114 (496)
158 PLN03052 acetate--CoA ligase; 59.9 84 0.0018 32.8 10.5 99 190-290 188-289 (728)
159 TIGR01733 AA-adenyl-dom amino 58.9 1.3E+02 0.0027 28.3 11.1 98 56-157 119-226 (408)
160 PRK07788 acyl-CoA synthetase; 58.8 61 0.0013 32.2 9.2 85 211-296 74-161 (549)
161 PLN02565 cysteine synthase 58.7 70 0.0015 29.4 8.8 90 58-150 31-121 (322)
162 PRK08008 caiC putative crotono 57.7 1.1E+02 0.0024 29.9 10.8 101 189-294 19-122 (517)
163 PLN02249 indole-3-acetic acid- 57.7 4 8.7E-05 40.9 0.5 28 190-217 98-126 (597)
164 PRK07529 AMP-binding domain pr 57.4 70 0.0015 32.6 9.5 98 190-289 38-137 (632)
165 PRK13388 acyl-CoA synthetase; 56.8 1E+02 0.0022 30.6 10.3 84 211-295 26-113 (540)
166 PRK05857 acyl-CoA synthetase; 56.0 78 0.0017 31.4 9.4 95 189-291 26-123 (540)
167 KOG1176 Acyl-CoA synthetase [L 55.7 44 0.00096 33.2 7.3 90 209-299 43-137 (537)
168 PRK06155 crotonobetaine/carnit 55.4 89 0.0019 31.0 9.7 86 211-297 46-134 (542)
169 TIGR02379 ECA_wecE TDP-4-keto- 55.2 54 0.0012 30.9 7.6 59 85-148 62-125 (376)
170 PF01041 DegT_DnrJ_EryC1: DegT 54.9 41 0.00089 31.5 6.8 65 80-149 51-120 (363)
171 cd07050 BMC_EutL_repeat2 ethan 54.6 17 0.00038 25.2 3.0 39 83-121 3-41 (87)
172 PRK13295 cyclohexanecarboxylat 54.6 99 0.0021 30.7 9.9 97 190-290 37-136 (547)
173 PRK00174 acetyl-CoA synthetase 54.1 1E+02 0.0022 31.5 10.0 96 190-289 80-178 (637)
174 PRK12583 acyl-CoA synthetase; 54.1 1.7E+02 0.0037 29.0 11.5 82 68-153 219-302 (558)
175 TIGR01136 cysKM cysteine synth 54.1 1.1E+02 0.0024 27.7 9.3 90 58-151 23-113 (299)
176 PRK04319 acetyl-CoA synthetase 53.8 1.2E+02 0.0027 30.2 10.4 98 56-157 204-310 (570)
177 PRK03584 acetoacetyl-CoA synth 53.8 1.1E+02 0.0024 31.2 10.3 94 191-289 98-194 (655)
178 TIGR02188 Ac_CoA_lig_AcsA acet 53.4 96 0.0021 31.5 9.7 97 190-290 70-169 (625)
179 PTZ00237 acetyl-CoA synthetase 53.2 63 0.0014 33.1 8.3 79 210-289 91-172 (647)
180 PLN03051 acyl-activating enzym 53.1 1.4E+02 0.0029 29.3 10.4 97 56-156 118-222 (499)
181 PLN02246 4-coumarate--CoA liga 52.9 1.1E+02 0.0025 30.2 10.0 98 190-295 36-136 (537)
182 PRK11706 TDP-4-oxo-6-deoxy-D-g 52.8 68 0.0015 30.2 7.9 59 86-149 63-126 (375)
183 TIGR03098 ligase_PEP_1 acyl-Co 52.7 71 0.0015 31.3 8.4 84 211-295 25-111 (515)
184 PLN02330 4-coumarate--CoA liga 52.4 1.1E+02 0.0023 30.5 9.7 97 190-294 41-140 (546)
185 PLN02860 o-succinylbenzoate-Co 52.2 1.9E+02 0.0041 28.8 11.5 96 56-156 171-274 (563)
186 PLN02654 acetate-CoA ligase 51.9 66 0.0014 33.1 8.2 79 211-290 120-201 (666)
187 PRK08279 long-chain-acyl-CoA s 51.3 1.6E+02 0.0034 29.7 10.8 96 190-295 50-148 (600)
188 PRK07798 acyl-CoA synthetase; 50.4 1.6E+02 0.0034 28.9 10.5 85 211-296 28-115 (533)
189 TIGR01139 cysK cysteine syntha 50.3 1.2E+02 0.0026 27.5 8.8 91 57-151 21-112 (298)
190 PLN02574 4-coumarate--CoA liga 50.2 1.6E+02 0.0035 29.3 10.6 99 190-296 52-154 (560)
191 PRK13383 acyl-CoA synthetase; 49.6 97 0.0021 30.4 8.9 85 211-296 60-147 (516)
192 PLN03102 acyl-activating enzym 49.3 91 0.002 31.3 8.7 82 211-293 39-123 (579)
193 PF06543 Lac_bphage_repr: Lact 49.1 15 0.00032 22.6 1.7 23 309-331 21-43 (49)
194 PRK05605 long-chain-fatty-acid 48.9 98 0.0021 30.9 8.9 84 211-295 57-143 (573)
195 KOG1250 Threonine/serine dehyd 48.9 1.6E+02 0.0035 27.8 9.0 87 58-152 82-170 (457)
196 cd06448 L-Ser-dehyd Serine deh 48.8 1.5E+02 0.0033 27.1 9.3 90 58-151 17-106 (316)
197 COG1064 AdhP Zn-dependent alco 48.5 37 0.00081 31.3 5.1 62 84-150 157-218 (339)
198 PLN02861 long-chain-fatty-acid 48.3 1.2E+02 0.0026 31.1 9.5 86 211-297 77-165 (660)
199 TIGR01217 ac_ac_CoA_syn acetoa 48.1 82 0.0018 32.3 8.2 78 211-289 114-194 (652)
200 PLN02556 cysteine synthase/L-3 47.4 1.1E+02 0.0024 28.8 8.2 91 58-150 75-165 (368)
201 COG0365 Acs Acyl-coenzyme A sy 47.3 95 0.0021 30.8 8.0 99 192-296 25-127 (528)
202 PRK05850 acyl-CoA synthetase; 47.0 1.8E+02 0.0039 29.1 10.4 84 210-295 34-123 (578)
203 PLN02430 long-chain-fatty-acid 47.0 1.8E+02 0.0039 29.9 10.5 100 212-315 77-179 (660)
204 PRK05677 long-chain-fatty-acid 47.0 1.6E+02 0.0035 29.3 10.1 94 190-293 37-134 (562)
205 COG0031 CysK Cysteine synthase 47.0 1.4E+02 0.0031 27.1 8.4 58 92-150 59-116 (300)
206 PRK09088 acyl-CoA synthetase; 46.9 1.6E+02 0.0035 28.5 9.9 92 190-289 8-102 (488)
207 PLN02614 long-chain acyl-CoA s 46.8 1.3E+02 0.0028 30.9 9.5 86 211-297 79-167 (666)
208 PRK07514 malonyl-CoA synthase; 46.8 1.1E+02 0.0024 29.8 8.8 85 210-295 27-114 (504)
209 PRK08314 long-chain-fatty-acid 46.7 1.1E+02 0.0023 30.3 8.7 85 211-296 35-123 (546)
210 PRK13391 acyl-CoA synthetase; 46.6 2E+02 0.0043 28.2 10.5 97 190-294 10-109 (511)
211 TIGR03443 alpha_am_amid L-amin 46.4 1.2E+02 0.0026 34.3 9.9 99 189-288 248-349 (1389)
212 PRK10696 tRNA 2-thiocytidine b 46.3 1.7E+02 0.0037 25.8 9.0 78 71-149 4-94 (258)
213 cd03466 Nitrogenase_NifN_2 Nit 45.7 1.6E+02 0.0034 28.5 9.2 56 94-150 299-358 (429)
214 TIGR02316 propion_prpE propion 45.6 2.2E+02 0.0048 28.9 10.9 96 190-289 65-163 (628)
215 PRK06087 short chain acyl-CoA 45.0 1.5E+02 0.0032 29.4 9.4 90 190-288 36-128 (547)
216 PRK07008 long-chain-fatty-acid 44.8 1.7E+02 0.0036 29.0 9.7 87 68-156 194-281 (539)
217 COG1167 ARO8 Transcriptional r 44.7 1E+02 0.0022 30.1 7.8 57 231-291 176-236 (459)
218 PRK11070 ssDNA exonuclease Rec 44.6 2.1E+02 0.0045 28.9 10.0 94 69-169 49-160 (575)
219 PRK08162 acyl-CoA synthetase; 44.5 1.1E+02 0.0024 30.3 8.4 84 211-295 43-129 (545)
220 PRK08751 putative long-chain f 44.3 1.2E+02 0.0027 30.1 8.7 95 190-294 38-136 (560)
221 PRK07470 acyl-CoA synthetase; 43.6 2.4E+02 0.0052 27.7 10.6 100 56-157 162-269 (528)
222 PRK08308 acyl-CoA synthetase; 43.6 2.4E+02 0.0053 26.6 10.4 97 56-157 100-205 (414)
223 cd01449 TST_Repeat_2 Thiosulfa 42.8 44 0.00096 25.1 4.2 40 80-120 64-103 (118)
224 PRK02261 methylaspartate mutas 42.7 1.3E+02 0.0028 23.7 6.8 85 243-330 14-111 (137)
225 PRK08276 long-chain-fatty-acid 42.7 1.5E+02 0.0032 29.0 8.9 83 212-295 12-97 (502)
226 PRK06188 acyl-CoA synthetase; 42.4 1.6E+02 0.0035 29.0 9.1 84 68-156 186-269 (524)
227 PRK10717 cysteine synthase A; 41.1 2.3E+02 0.0051 26.0 9.4 90 58-151 29-119 (330)
228 PRK13390 acyl-CoA synthetase; 41.0 2.6E+02 0.0055 27.3 10.3 93 190-290 10-105 (501)
229 PRK11658 UDP-4-amino-4-deoxy-L 40.6 1.2E+02 0.0025 28.7 7.4 62 81-147 60-126 (379)
230 PF02606 LpxK: Tetraacyldisacc 40.4 94 0.002 28.7 6.5 52 115-168 103-154 (326)
231 PRK10524 prpE propionyl-CoA sy 40.3 1.3E+02 0.0029 30.5 8.3 96 190-289 66-164 (629)
232 PF02350 Epimerase_2: UDP-N-ac 40.1 3.1E+02 0.0068 25.5 14.1 202 73-292 50-270 (346)
233 PRK06164 acyl-CoA synthetase; 39.9 2.8E+02 0.0061 27.3 10.5 96 56-156 180-283 (540)
234 cd01519 RHOD_HSP67B2 Member of 39.7 66 0.0014 23.5 4.6 52 69-121 37-92 (106)
235 PF00818 Ice_nucleation: Ice n 39.7 14 0.00031 16.9 0.5 10 339-348 1-10 (16)
236 PRK07059 Long-chain-fatty-acid 39.1 1.6E+02 0.0035 29.3 8.6 83 211-294 48-133 (557)
237 PRK06178 acyl-CoA synthetase; 39.1 1.7E+02 0.0037 29.1 8.9 85 211-296 58-145 (567)
238 PRK15407 lipopolysaccharide bi 38.9 1.4E+02 0.003 28.9 7.8 55 91-149 107-166 (438)
239 PRK05620 long-chain-fatty-acid 38.8 3.1E+02 0.0068 27.4 10.7 97 56-154 180-284 (576)
240 PRK13237 tyrosine phenol-lyase 38.8 2.2E+02 0.0047 27.8 8.8 70 68-142 76-174 (460)
241 PLN00011 cysteine synthase 38.7 2.2E+02 0.0047 26.2 8.7 91 58-151 33-124 (323)
242 cd01974 Nitrogenase_MoFe_beta 38.5 2.3E+02 0.005 27.4 9.2 30 94-124 302-331 (435)
243 PRK12406 long-chain-fatty-acid 38.3 1.7E+02 0.0036 28.7 8.5 84 211-295 11-97 (509)
244 COG0318 CaiC Acyl-CoA syntheta 37.8 2.9E+02 0.0064 27.4 10.2 93 190-290 24-119 (534)
245 TIGR03588 PseC UDP-4-keto-6-de 37.7 1.5E+02 0.0033 27.8 7.8 65 80-148 55-127 (380)
246 KOG1179 Very long-chain acyl-C 37.7 2.9E+02 0.0063 27.6 9.3 128 69-201 261-402 (649)
247 KOG0025 Zn2+-binding dehydroge 37.7 1.1E+02 0.0023 27.7 5.9 63 91-153 157-220 (354)
248 PF11974 MG1: Alpha-2-macroglo 37.7 22 0.00049 26.0 1.7 35 362-396 22-59 (97)
249 TIGR01138 cysM cysteine syntha 36.8 2.5E+02 0.0054 25.3 8.7 90 57-150 23-113 (290)
250 TIGR01285 nifN nitrogenase mol 36.8 2.6E+02 0.0056 27.0 9.2 73 94-167 310-398 (432)
251 PF03808 Glyco_tran_WecB: Glyc 36.8 51 0.0011 27.1 3.8 78 257-340 3-81 (172)
252 PF04122 CW_binding_2: Putativ 36.7 1.6E+02 0.0034 21.0 6.5 67 74-144 7-74 (92)
253 PF00464 SHMT: Serine hydroxym 36.3 3.8E+02 0.0083 25.6 9.9 135 72-214 64-245 (399)
254 cd02070 corrinoid_protein_B12- 36.2 2.6E+02 0.0057 23.5 11.2 87 235-323 84-179 (201)
255 PRK07769 long-chain-fatty-acid 36.1 4.1E+02 0.009 26.9 11.2 83 211-294 55-142 (631)
256 PRK05852 acyl-CoA synthetase; 36.0 2.9E+02 0.0062 27.3 9.8 76 211-287 43-121 (534)
257 PRK10946 entE enterobactin syn 35.9 4.1E+02 0.0089 26.2 10.9 96 56-156 181-286 (536)
258 PLN02723 3-mercaptopyruvate su 35.9 57 0.0012 30.0 4.4 52 69-121 238-295 (320)
259 PRK07638 acyl-CoA synthetase; 35.9 2.5E+02 0.0055 27.2 9.3 85 68-157 161-246 (487)
260 PRK06381 threonine synthase; V 35.8 3.3E+02 0.007 24.9 9.4 89 57-152 31-119 (319)
261 PLN02479 acetate-CoA ligase 35.3 2.5E+02 0.0054 28.0 9.3 82 211-293 45-129 (567)
262 TIGR02262 benz_CoA_lig benzoat 35.2 2.6E+02 0.0057 27.2 9.4 84 211-295 30-116 (508)
263 PRK13382 acyl-CoA synthetase; 35.2 2.5E+02 0.0055 27.7 9.3 82 211-293 68-152 (537)
264 COG2236 Predicted phosphoribos 35.2 66 0.0014 27.0 4.2 32 68-100 5-36 (192)
265 PRK09162 hypoxanthine-guanine 35.1 1.1E+02 0.0023 25.5 5.5 47 67-115 14-60 (181)
266 KOG0023 Alcohol dehydrogenase, 34.8 1.9E+02 0.0041 26.6 7.1 66 84-153 172-237 (360)
267 TIGR01923 menE O-succinylbenzo 34.6 2E+02 0.0044 27.3 8.3 60 230-290 20-80 (436)
268 PRK08043 bifunctional acyl-[ac 34.5 3.9E+02 0.0085 27.7 10.8 94 56-153 364-466 (718)
269 PRK08633 2-acyl-glycerophospho 34.2 2.8E+02 0.0062 30.5 10.3 99 189-296 627-727 (1146)
270 cd04910 ACT_AK-Ectoine_1 ACT d 33.6 1E+02 0.0022 21.2 4.2 51 271-336 19-69 (71)
271 PF09269 DUF1967: Domain of un 33.6 41 0.00089 22.8 2.3 22 78-100 41-62 (69)
272 PF00455 DeoRC: DeoR C termina 33.6 2.3E+02 0.0051 22.9 7.2 86 254-347 15-108 (161)
273 PRK07867 acyl-CoA synthetase; 33.5 2.4E+02 0.0051 27.9 8.7 83 211-294 28-114 (529)
274 TIGR03595 Obg_CgtA_exten Obg f 33.2 52 0.0011 22.3 2.8 19 82-101 45-63 (69)
275 PRK03640 O-succinylbenzoic aci 33.0 2.7E+02 0.0058 26.9 9.0 94 190-293 15-111 (483)
276 PRK12582 acyl-CoA synthetase; 33.0 1.7E+02 0.0037 29.7 7.7 78 211-289 80-165 (624)
277 TIGR01137 cysta_beta cystathio 32.9 2.4E+02 0.0052 27.3 8.4 89 58-150 27-116 (454)
278 PTZ00216 acyl-CoA synthetase; 32.9 2.5E+02 0.0055 29.0 9.1 88 209-297 119-209 (700)
279 PRK11493 sseA 3-mercaptopyruva 32.6 67 0.0015 28.8 4.3 53 68-121 200-257 (281)
280 cd02069 methionine_synthase_B1 32.6 3.2E+02 0.0069 23.4 9.2 91 232-326 87-186 (213)
281 PRK07786 long-chain-fatty-acid 32.4 2.7E+02 0.0058 27.6 9.0 83 211-294 42-127 (542)
282 PRK12476 putative fatty-acid-- 32.4 2.6E+02 0.0057 28.3 9.0 102 190-294 47-155 (612)
283 PRK12492 long-chain-fatty-acid 32.3 1.6E+02 0.0035 29.3 7.4 80 211-291 49-132 (562)
284 cd00615 Orn_deC_like Ornithine 32.0 2E+02 0.0044 25.8 7.4 55 92-149 96-161 (294)
285 TIGR02275 DHB_AMP_lig 2,3-dihy 31.9 4.7E+02 0.01 25.6 10.6 96 56-156 182-287 (527)
286 PRK09192 acyl-CoA synthetase; 31.9 2.9E+02 0.0064 27.6 9.2 86 210-296 48-143 (579)
287 TIGR03208 cyc_hxne_CoA_lg cycl 31.8 3.6E+02 0.0078 26.6 9.8 79 210-289 52-133 (538)
288 TIGR02618 tyr_phenol_ly tyrosi 31.6 3.3E+02 0.0072 26.4 8.7 69 68-142 69-167 (450)
289 COG1611 Predicted Rossmann fol 31.2 1.5E+02 0.0032 25.3 5.8 69 57-133 15-84 (205)
290 PRK05939 hypothetical protein; 30.4 2.4E+02 0.0051 26.9 7.7 56 92-149 83-138 (397)
291 PRK06702 O-acetylhomoserine am 30.4 2E+02 0.0044 27.8 7.2 57 92-150 97-155 (432)
292 COG4821 Uncharacterized protei 30.4 1E+02 0.0022 26.0 4.4 55 75-150 85-139 (243)
293 PRK06060 acyl-CoA synthetase; 30.2 2.7E+02 0.0059 28.8 8.8 82 211-293 30-114 (705)
294 cd01561 CBS_like CBS_like: Thi 30.0 3.4E+02 0.0074 24.3 8.5 92 57-152 17-109 (291)
295 PRK06018 putative acyl-CoA syn 29.5 2.1E+02 0.0046 28.3 7.7 82 211-293 39-123 (542)
296 cd01967 Nitrogenase_MoFe_alpha 29.5 4.7E+02 0.01 24.8 9.7 34 93-127 284-317 (406)
297 PRK14057 epimerase; Provisiona 29.2 4.1E+02 0.0088 23.6 8.5 64 82-149 90-163 (254)
298 TIGR00936 ahcY adenosylhomocys 29.0 2.6E+02 0.0055 26.8 7.5 64 83-147 21-86 (406)
299 PRK10252 entF enterobactin syn 28.9 5.4E+02 0.012 28.9 11.4 95 56-154 597-701 (1296)
300 PLN02409 serine--glyoxylate am 28.7 2.4E+02 0.0052 26.8 7.6 20 322-342 321-340 (401)
301 PRK07476 eutB threonine dehydr 28.7 3.1E+02 0.0068 25.1 8.1 89 58-152 35-123 (322)
302 PTZ00297 pantothenate kinase; 28.7 4.5E+02 0.0098 30.0 10.3 98 211-316 457-556 (1452)
303 PRK15400 lysine decarboxylase 28.4 1.6E+02 0.0034 30.5 6.4 57 92-151 232-307 (714)
304 PRK06710 long-chain-fatty-acid 28.3 2.2E+02 0.0049 28.3 7.7 82 211-293 49-133 (563)
305 PF06277 EutA: Ethanolamine ut 28.3 2.5E+02 0.0055 27.3 7.3 71 38-111 353-424 (473)
306 cd01448 TST_Repeat_1 Thiosulfa 28.2 1.9E+02 0.0041 21.7 5.6 40 81-121 66-106 (122)
307 TIGR01734 D-ala-DACP-lig D-ala 28.1 2.2E+02 0.0048 27.7 7.4 79 211-290 25-106 (502)
308 PRK08974 long-chain-fatty-acid 28.1 2.8E+02 0.0062 27.5 8.3 81 211-292 48-132 (560)
309 PLN02550 threonine dehydratase 27.9 5.4E+02 0.012 26.1 9.8 89 58-152 125-213 (591)
310 PF13580 SIS_2: SIS domain; PD 27.9 1.1E+02 0.0024 23.9 4.3 55 71-125 80-136 (138)
311 PRK09029 O-succinylbenzoic aci 27.9 2.9E+02 0.0063 26.5 8.2 78 211-289 28-108 (458)
312 PRK02261 methylaspartate mutas 27.8 3E+02 0.0065 21.6 7.5 41 110-150 22-62 (137)
313 cd01971 Nitrogenase_VnfN_like 27.8 4.6E+02 0.01 25.2 9.3 31 95-125 293-323 (427)
314 PRK07239 bifunctional uroporph 27.5 2.2E+02 0.0047 26.9 7.0 48 95-148 98-148 (381)
315 TIGR01286 nifK nitrogenase mol 27.4 4.6E+02 0.01 26.1 9.3 46 94-140 362-411 (515)
316 TIGR00715 precor6x_red precorr 27.2 3.1E+02 0.0067 24.3 7.4 72 95-169 150-232 (256)
317 COG1205 Distinct helicase fami 27.2 7.1E+02 0.015 26.7 11.0 83 232-314 113-201 (851)
318 COG1167 ARO8 Transcriptional r 27.2 4.1E+02 0.0089 25.9 8.9 58 93-153 177-237 (459)
319 cd00640 Trp-synth-beta_II Tryp 27.0 4.2E+02 0.009 22.9 9.2 91 57-151 15-105 (244)
320 PLN02356 phosphateglycerate ki 26.8 3.3E+02 0.0071 26.3 7.9 88 58-149 69-157 (423)
321 PRK08180 feruloyl-CoA synthase 26.6 2.4E+02 0.0053 28.5 7.6 95 190-289 52-154 (614)
322 cd07100 ALDH_SSADH1_GabD1 Myco 26.6 4.6E+02 0.01 25.2 9.1 48 233-280 96-149 (429)
323 PRK09331 Sep-tRNA:Cys-tRNA syn 26.5 3.3E+02 0.0071 25.7 8.0 55 92-149 99-165 (387)
324 cd04863 MtLigD_Pol_like MtLigD 26.1 2.9E+02 0.0063 24.0 6.7 68 54-138 100-167 (231)
325 cd06451 AGAT_like Alanine-glyo 25.9 2.5E+02 0.0054 25.9 7.0 11 209-219 195-205 (356)
326 PRK10595 SOS cell division inh 25.9 2.1E+02 0.0045 23.4 5.4 65 83-148 70-140 (164)
327 PRK09224 threonine dehydratase 25.7 4E+02 0.0088 26.4 8.6 90 58-153 36-125 (504)
328 cd02067 B12-binding B12 bindin 24.9 3E+02 0.0065 20.6 6.8 37 114-150 22-58 (119)
329 PRK05638 threonine synthase; V 24.9 6E+02 0.013 24.6 9.6 91 58-155 81-171 (442)
330 PRK09177 xanthine-guanine phos 24.8 2.1E+02 0.0045 23.1 5.4 36 68-106 8-43 (156)
331 TIGR01127 ilvA_1Cterm threonin 24.8 5.1E+02 0.011 24.4 8.9 89 58-152 16-104 (380)
332 PF07722 Peptidase_C26: Peptid 24.7 81 0.0017 27.1 3.2 30 113-142 31-60 (217)
333 smart00450 RHOD Rhodanese Homo 24.7 2.2E+02 0.0048 19.8 5.3 40 81-121 43-82 (100)
334 TIGR01278 DPOR_BchB light-inde 24.5 3E+02 0.0065 27.3 7.5 34 94-127 294-327 (511)
335 TIGR02822 adh_fam_2 zinc-bindi 24.5 2.4E+02 0.0051 25.9 6.5 58 86-148 158-215 (329)
336 cd04861 LigD_Pol_like LigD_Pol 24.3 3.4E+02 0.0073 23.6 6.7 68 54-138 96-163 (227)
337 PRK10411 DNA-binding transcrip 24.1 2.9E+02 0.0063 24.1 6.6 82 259-348 94-182 (240)
338 PRK06814 acylglycerophosphoeth 24.1 7.1E+02 0.015 27.5 11.1 97 56-156 792-897 (1140)
339 PRK04813 D-alanine--poly(phosp 23.7 3E+02 0.0066 26.6 7.5 78 211-289 27-107 (503)
340 COG4822 CbiK Cobalamin biosynt 23.3 3.5E+02 0.0075 23.3 6.3 101 210-331 113-225 (265)
341 PRK07787 acyl-CoA synthetase; 23.1 3.9E+02 0.0084 25.8 8.0 75 211-289 25-100 (471)
342 COG1022 FAA1 Long-chain acyl-C 22.9 6.3E+02 0.014 25.8 9.3 97 56-157 190-294 (613)
343 PLN02238 hypoxanthine phosphor 22.9 2.2E+02 0.0047 23.9 5.3 21 68-88 10-30 (189)
344 COG5012 Predicted cobalamin bi 22.9 4.4E+02 0.0094 22.8 7.0 83 243-327 115-205 (227)
345 PRK07591 threonine synthase; V 22.9 4.6E+02 0.0099 25.2 8.2 88 58-152 106-193 (421)
346 COG0436 Aspartate/tyrosine/aro 22.7 5.2E+02 0.011 24.6 8.5 54 92-149 110-170 (393)
347 PRK08329 threonine synthase; V 22.6 6.3E+02 0.014 23.5 10.4 87 58-151 73-159 (347)
348 cd01965 Nitrogenase_MoFe_beta_ 22.6 5.9E+02 0.013 24.5 9.0 73 94-167 298-396 (428)
349 PRK06382 threonine dehydratase 22.6 4.4E+02 0.0096 25.1 8.1 89 58-152 41-129 (406)
350 PRK10287 thiosulfate:cyanide s 22.4 2.7E+02 0.0059 20.6 5.3 49 68-124 41-89 (104)
351 TIGR03201 dearomat_had 6-hydro 22.2 2.7E+02 0.0058 25.7 6.5 58 86-148 159-216 (349)
352 PRK05851 long-chain-fatty-acid 22.2 5E+02 0.011 25.6 8.7 99 190-294 15-121 (525)
353 PLN02419 methylmalonate-semial 22.1 4.8E+02 0.01 26.6 8.4 67 232-298 248-325 (604)
354 cd01979 Pchlide_reductase_N Pc 22.1 6.4E+02 0.014 23.9 9.0 56 94-150 275-331 (396)
355 PRK12483 threonine dehydratase 22.1 7E+02 0.015 24.9 9.4 90 58-153 53-142 (521)
356 cd02070 corrinoid_protein_B12- 21.9 4.8E+02 0.01 21.9 9.6 84 67-150 48-141 (201)
357 PRK08574 cystathionine gamma-s 21.8 3.5E+02 0.0075 25.6 7.1 56 92-149 89-144 (385)
358 TIGR01796 CM_mono_aroH monofun 21.8 1.3E+02 0.0027 23.0 3.2 55 71-125 14-71 (117)
359 TIGR01284 alt_nitrog_alph nitr 21.7 6.3E+02 0.014 24.6 9.0 74 94-167 324-402 (457)
360 cd04865 LigD_Pol_like_2 LigD_P 21.5 4.1E+02 0.0088 23.1 6.7 67 54-137 97-163 (228)
361 TIGR02778 ligD_pol DNA polymer 21.4 4E+02 0.0087 23.4 6.7 67 54-137 112-178 (245)
362 PRK15399 lysine decarboxylase 21.2 2.7E+02 0.0059 28.9 6.5 47 92-141 232-292 (713)
363 TIGR00682 lpxK tetraacyldisacc 21.0 2.3E+02 0.0051 25.9 5.5 47 121-168 101-147 (311)
364 cd02071 MM_CoA_mut_B12_BD meth 20.9 2.9E+02 0.0064 21.0 5.4 38 113-150 21-58 (122)
365 PLN02723 3-mercaptopyruvate su 20.9 2.2E+02 0.0049 26.1 5.5 49 80-129 89-139 (320)
366 TIGR02080 O_succ_thio_ly O-suc 20.7 3.8E+02 0.0083 25.3 7.2 57 92-149 87-143 (382)
367 PF02729 OTCace_N: Aspartate/o 20.7 4.3E+02 0.0094 20.9 8.3 79 73-152 15-104 (142)
368 TIGR00260 thrC threonine synth 20.6 5.1E+02 0.011 23.7 7.9 87 58-151 40-127 (328)
369 PRK12723 flagellar biosynthesi 20.5 4.6E+02 0.0099 25.0 7.5 35 231-266 312-346 (388)
370 PRK10719 eutA reactivating fac 20.3 3.7E+02 0.008 26.2 6.8 71 38-111 354-425 (475)
371 TIGR03205 pimA dicarboxylate-- 20.2 4.5E+02 0.0097 25.9 8.0 78 211-289 46-126 (541)
372 PF05221 AdoHcyase: S-adenosyl 20.2 3.9E+02 0.0084 23.8 6.4 58 90-147 38-97 (268)
373 PF14552 Tautomerase_2: Tautom 20.1 1.5E+02 0.0033 20.9 3.3 39 69-107 39-77 (82)
374 CHL00076 chlB photochlorophyll 20.0 5.6E+02 0.012 25.5 8.3 56 94-149 304-361 (513)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.1e-56 Score=422.14 Aligned_cols=343 Identities=34% Similarity=0.524 Sum_probs=294.6
Q ss_pred cEEEeCCC-CceeeHHHHHHHHHHHHHHhHhccC--CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 59 VALINSVT-GLRVSFSEFTRRTNSLASYLQNVTR--LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 59 ~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~~g--v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
+.+++... +..+||+|+.+++.++|.+|.+ .| +++||+|++++||+++++++++||..+|+++.++||.+.+.++.
T Consensus 34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~ 112 (537)
T KOG1176|consen 34 TSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIA 112 (537)
T ss_pred ceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHH
Confidence 66666532 5899999999999999999997 66 89999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCchHHHHhhc----CCeEEEeCCC----cchh----------hhcccCCcccccccccCCCCEEEE
Q 015325 136 RQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSP----EFDS----------MTMSWNSKHELDRAKVCQSDVAAI 197 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~----~~~~----------~~~~~~~~~~~~~~~~~~~~~a~i 197 (409)
..++.++++++|++.+....+.+. ..+++++... .... +...... .. .....++|++.+
T Consensus 113 ~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~dd~~~i 189 (537)
T KOG1176|consen 113 KQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP--DG-IRPVSEDDTAAI 189 (537)
T ss_pred HHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC--cc-cccCCCCCeEEE
Confidence 999999999999999888777533 2445554432 1111 1111110 11 345566999999
Q ss_pred EcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHH-HHHhCCeEEEecCCCHHHHHHH
Q 015325 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR-AAALMETAVVMQRFDLKMMLKA 276 (409)
Q Consensus 198 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~-~l~~G~~~v~~~~~~~~~~~~~ 276 (409)
+|||||||.||||++||++++.......... .....|+.++.+|++|.+|++.++. ++..|+++++.+.++++.+++.
T Consensus 190 l~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~ 268 (537)
T KOG1176|consen 190 LYSSGTTGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDL 268 (537)
T ss_pred ecCCCCCCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHH
Confidence 9999999999999999999998877666655 5777999999999999999966665 5555666666677899999999
Q ss_pred HHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCC
Q 015325 277 VEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPD 356 (409)
Q Consensus 277 i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~ 356 (409)
|++|++|+++++|+++..|++.+.....+++++|.+.+||+++++++.+++++++|...+.+.||+||+++.++.....+
T Consensus 269 i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~ 348 (537)
T KOG1176|consen 269 IEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGP 348 (537)
T ss_pred HHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCc
Confidence 99999999999999999999998777889999999999999999999999999997799999999999998777755444
Q ss_pred CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 357 ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 357 ~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
. .+++++|.++++++++|.+ ++|+.+++++.||||++|+++|+|||+||+
T Consensus 349 e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~Npe 398 (537)
T KOG1176|consen 349 E-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPE 398 (537)
T ss_pred c-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChH
Confidence 4 6899999999999999888 999999999999999999999999999986
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-56 Score=400.54 Aligned_cols=364 Identities=25% Similarity=0.310 Sum_probs=315.0
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
-|+.+.|....++. ||+.|.+....+.++||+||.+.+..+|++|.+ +|+++||||++..||+.+|+..++||.+
T Consensus 50 ~Tigq~l~~~t~~v----~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 50 ETIGQLLETTTERV----PDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-LGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred ccHHHHHHHHhhcc----CcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-hcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 89999999999999 999999998778899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH-----HHHhhc------------------CCeEEEeCC------
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------------------KHRTILIDS------ 168 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------------------~~~~~~~~~------ 168 (409)
+|.+.+++||++...+++..|++.+++++|+.+.+. +.+.++ ..+.+++.+
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~ 204 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLP 204 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCC
Confidence 999999999999999999999999999999876432 111111 111122211
Q ss_pred --CcchhhhcccCCcc----cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCc
Q 015325 169 --PEFDSMTMSWNSKH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (409)
Q Consensus 169 --~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p 242 (409)
..+.+++...+... ........|+|++.|.|||||||.|||+.+||.+++++.......+ ++.+++++++..|
T Consensus 205 Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~-g~~e~~~i~~~~P 283 (596)
T KOG1177|consen 205 GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA-GYNEKHRICIPNP 283 (596)
T ss_pred CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh-CcCcceEEEecCc
Confidence 11445554443321 1222345679999999999999999999999999999999999988 7888999999999
Q ss_pred hhhHHhH-HHHHHHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCC
Q 015325 243 YFHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (409)
Q Consensus 243 ~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~ 320 (409)
++|++|. ..+++++..|++++++ +.|++...+..|.++++|.++++|+++..|++.+..+..++++||.++.||++++
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s 363 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVS 363 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCC
Confidence 9999997 8999999999999997 5699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCceecccCcccccceecccC-CCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCcc
Q 015325 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV-GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (409)
Q Consensus 321 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~-~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v 399 (409)
+++++...+...-..+...||+||++...+... .++......++|+.+++.+.+|+| +.|..++-|..|||++||+++
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~t 442 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYST 442 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechh
Confidence 999999999773334777899999997666532 334445668999999999999999 999999999999999999999
Q ss_pred ccccCCCCC
Q 015325 400 MKGIFLPHF 408 (409)
Q Consensus 400 ~~gY~~~~~ 408 (409)
|.|||++++
T Consensus 443 Ml~Ywg~~~ 451 (596)
T KOG1177|consen 443 MLGYWGEEE 451 (596)
T ss_pred heeecCCcc
Confidence 999999775
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.4e-55 Score=428.66 Aligned_cols=365 Identities=30% Similarity=0.434 Sum_probs=304.7
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
..++.+.|.+.+..+ |+++|+++.+...++||+||.++++++|+.|++ .|+++||+|+|+++|++++++++|||+
T Consensus 10 ~~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~~v~~gdrVail~~N~~e~~~~~~a~~ 84 (534)
T COG0318 10 ELTLASLLERAARRN----PDRPALIFLGRGGRLTYRELDRRANRLAAALQA-LGVKPGDRVAILLPNSPEFLIAFLAAL 84 (534)
T ss_pred cccHHHHHHHHHHhC----CCceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 489999999999999 999999997332349999999999999999999 899999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC----C-e-EEEeCCC------cchhhhcccCCcccc
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK----H-R-TILIDSP------EFDSMTMSWNSKHEL 184 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~-~-~~~~~~~------~~~~~~~~~~~~~~~ 184 (409)
++|++++|++|.+...++.++++.+++++++++.+......... . . +...... .++......... ..
T Consensus 85 ~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 163 (534)
T COG0318 85 RAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGP-DA 163 (534)
T ss_pred hcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCc-cc
Confidence 99999999999999999999999999999999987433333221 1 1 1111111 122322111110 11
Q ss_pred cccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC-CCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeE
Q 015325 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (409)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~ 262 (409)
.....+++++++++|||||||.||||++||++++.+.......+.. ++..|++++++|++|.+|+ ..++..+..|+++
T Consensus 164 ~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~ 243 (534)
T COG0318 164 DARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTL 243 (534)
T ss_pred ccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEE
Confidence 1122578999999999999999999999999999988888887722 8899999999999999999 4566669999999
Q ss_pred EEec--CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCC-cceeeecCCCCCHHHHHHHHHhCCCCceecc
Q 015325 263 VVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS-LETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (409)
Q Consensus 263 v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~-Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 339 (409)
++.+ .+++..++..+.++++|++.++|+++..++........++++ ||.++.||++++++++++|++.|+..++++.
T Consensus 244 v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~ 323 (534)
T COG0318 244 VLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEG 323 (534)
T ss_pred EeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEe
Confidence 9998 599999999999999999999999999999998777666665 9999999999999999999999965789999
Q ss_pred cCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
||+||++..++...........+++|+|+||++++|+|++++.++| |+.|||+|+||+++.||||+|.
T Consensus 324 YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe 391 (534)
T COG0318 324 YGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPE 391 (534)
T ss_pred ecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChH
Confidence 9999998766653322202467788999999999999976666667 9999999999999999999864
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.7e-55 Score=416.93 Aligned_cols=360 Identities=22% Similarity=0.305 Sum_probs=298.5
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCC---CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
+|+...+.++..+... ++++|++++.+ .+++||+||.+.++++|+.|++..|+ +||||++++|+.+|.++++||
T Consensus 8 lN~~~n~~dr~~~~~~--~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA 84 (528)
T COG0365 8 LNLALNALDRHLEADR--PDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLA 84 (528)
T ss_pred eechhhhhhhhhhccC--CCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHH
Confidence 6776665555543211 68899998633 27899999999999999999863567 999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCC---------eEEEeCC--CcchhhhcccCCccc
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKH---------RTILIDS--PEFDSMTMSWNSKHE 183 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~ 183 (409)
|+++||+++++.+.++.+.+...+++++++++|+++......+.... .+++... ..|.+.....+. .
T Consensus 85 ~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~--~ 162 (528)
T COG0365 85 TARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASE--K 162 (528)
T ss_pred HHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCC--C
Confidence 99999999999999999999999999999999998765544332111 0222221 344554444332 2
Q ss_pred ccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeE
Q 015325 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (409)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~ 262 (409)
........+|+++++|||||||+||||+++|..+.............+.++|++.+..+..|+.|. ..++.+|..|+++
T Consensus 163 ~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~ 242 (528)
T COG0365 163 FEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATT 242 (528)
T ss_pred CCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeE
Confidence 333447889999999999999999999999998887776666544367799999999999999999 6699999999999
Q ss_pred EEecC--C-CHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecc
Q 015325 263 VVMQR--F-DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (409)
Q Consensus 263 v~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 339 (409)
++.+. + +++.+++.|+++++|+++..|+.++.|.+....+++++++||.+.+.|||++++.++++.+.+ |++|.+.
T Consensus 243 ~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~d~ 321 (528)
T COG0365 243 VLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWILDI 321 (528)
T ss_pred EEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEecc
Confidence 99864 2 499999999999999999999999999998766778899999999999999999999999999 8999999
Q ss_pred cCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecC--ccccccCCCCC
Q 015325 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP--TIMKGIFLPHF 408 (409)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~--~v~~gY~~~~~ 408 (409)
||+||+++.... ... ..++++.|+|+||+++.|+| ++|+++++|+ |+|+++.| +++.|||++|+
T Consensus 322 ~gqTEtg~~~~~--~~~-~~~~g~~g~p~pG~~~~vvd-d~g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~e 387 (528)
T COG0365 322 YGQTETGMGFIA--GRP-PVKNGSSGLPLPGYAVRRVD-DEGNPVPPGV-GELVVRLPWPGMALTYWNDPE 387 (528)
T ss_pred ccccccCccccC--CCC-CcCCCCCCCCCCCceeEEEC-CCCCcCCCCc-eEEEEeCCCchhhhhhhCCHH
Confidence 999999854433 222 44566669999999999999 5699999999 99999987 99999999973
No 5
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=5.6e-54 Score=425.83 Aligned_cols=392 Identities=38% Similarity=0.565 Sum_probs=317.3
Q ss_pred cCCCCCCCCCCeeeecCCCCCCCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHh
Q 015325 9 FDTKSGFNSATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQN 88 (409)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~ 88 (409)
.+.-+.|++..+.+.+..|..+.|. +..+++.+.+.+. +.. |+++|+++...+.++||+||.++++++|+.|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~ 85 (560)
T PLN02574 12 NNPPFWYSPETGIYSSKHPPVPLPS-DPNLDAVSFIFSH-HNH----NGDTALIDSSTGFSISYSELQPLVKSMAAGLYH 85 (560)
T ss_pred CCCccccCcCCeeecCCCCCCCCCC-CCCCCHHHHHhcC-ccc----CCCCEEEECCCCCcccHHHHHHHHHHHHHHHHH
Confidence 4445556667778887665544433 2346777777776 455 999999987555689999999999999999995
Q ss_pred ccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCC
Q 015325 89 VTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS 168 (409)
Q Consensus 89 ~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 168 (409)
+.|+++||+|+++++|+.++++++|||+++|+++++++|..+.+++.++++.+++++++++.+....+......++.+..
T Consensus 86 ~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (560)
T PLN02574 86 VMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPE 165 (560)
T ss_pred HhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCc
Confidence 47999999999999999999999999999999999999999999999999999999999998776666544444443321
Q ss_pred -----------CcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc----cCCCCCC
Q 015325 169 -----------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA----SSPKRVS 233 (409)
Q Consensus 169 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~ 233 (409)
..+..+...... ........++++++++|||||||.||+|++||+++...+..... .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~ 243 (560)
T PLN02574 166 NYDFDSKRIEFPKFYELIKEDFD--FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGS 243 (560)
T ss_pred ccccccCccCcccHHHHhhcCCc--ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCC
Confidence 112222211111 11122345688999999999999999999999999887765543 1212345
Q ss_pred CCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCC-CCCCCCCcce
Q 015325 234 PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST-DGYDLSSLET 311 (409)
Q Consensus 234 ~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~-~~~~l~~Lr~ 311 (409)
.++++..+|++|.+++ ..++.++..|+++++.+.+++..++..|+++++|++.++|+++..|.+.... ...++++||.
T Consensus 244 ~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~ 323 (560)
T PLN02574 244 DNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQ 323 (560)
T ss_pred CcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceE
Confidence 6889999999999998 5677888899999999999999999999999999999999999999987543 3456889999
Q ss_pred eeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcce
Q 015325 312 VACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (409)
Q Consensus 312 v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Ge 391 (409)
+++||++++++++++|.+.++++.+++.||+||++...+...........+++|+|+++++++|+|+++|++++.|+.||
T Consensus 324 ~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Ge 403 (560)
T PLN02574 324 VSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGE 403 (560)
T ss_pred EEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeE
Confidence 99999999999999999999889999999999998655432233333456899999999999999988999999999999
Q ss_pred EEEecCccccccCCCCC
Q 015325 392 LSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 392 i~v~g~~v~~gY~~~~~ 408 (409)
|+|+|++++.|||+++.
T Consensus 404 i~v~g~~~~~GY~~~~~ 420 (560)
T PLN02574 404 LWIQGPGVMKGYLNNPK 420 (560)
T ss_pred EEEECcchhhhhcCChh
Confidence 99999999999999874
No 6
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.7e-54 Score=431.44 Aligned_cols=362 Identities=22% Similarity=0.272 Sum_probs=285.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeC----C-CC--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINS----V-TG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~----~-~~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
.|+.++|.+.++++ |+++|++.. . .+ .++||+||.++++++|++|++ +|+++||+|+|+++|+++|++
T Consensus 45 ~t~~~~l~~~a~~~----pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~n~~e~~~ 119 (666)
T PLN02614 45 DSCWDVFRMSVEKY----PNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-VGVKDEAKCGIYGANSPEWII 119 (666)
T ss_pred CcHHHHHHHHHHhC----CCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 58999999999998 999999842 1 12 358999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc------CCe-EEEeCCC--------------
Q 015325 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHR-TILIDSP-------------- 169 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~~~~~~~-------------- 169 (409)
+++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+ ++.++..
T Consensus 120 ~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~ 199 (666)
T PLN02614 120 SMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLV 199 (666)
T ss_pred HHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcE
Confidence 9999999999999999999999999999999999999987655443211 012 3333211
Q ss_pred --cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC----CCCCCCCEEEEeCch
Q 015325 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS----PKRVSPAVMLFTMPY 243 (409)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~~d~~l~~~p~ 243 (409)
.++++....... ........++|+++|+|||||||.||||++||+++...+......+ ..+..+|++++.+|+
T Consensus 200 ~~~~~~~~~~~~~~-~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 200 IYAWDEFLKLGEGK-QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEHHHHHhhcccC-CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 122222211110 1111234578999999999999999999999999988776554432 136788999999999
Q ss_pred hhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCC----------------------
Q 015325 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST---------------------- 301 (409)
Q Consensus 244 ~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~---------------------- 301 (409)
+|.++....+.++..|+++++.+ +++..+++.|+++++|+++++|++++.+......
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999865667788999998875 5899999999999999999999999987642100
Q ss_pred ---------CCC-------------CC-CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCC
Q 015325 302 ---------DGY-------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (409)
Q Consensus 302 ---------~~~-------------~l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 358 (409)
... .+ ++||.+++||+++++.+ ++|.+.++++++++.||+||+++..+.. .....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~-~~~~~ 435 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVS-LPDEL 435 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeee-ccccC
Confidence 000 01 58999999999999875 6777777568999999999987654432 22222
Q ss_pred CCCCccccccCCceEEEecC-C-CCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 359 RRWGSTGRLSAGLEAKIVDP-E-TGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 359 ~~~~s~G~p~~~~~v~i~d~-~-~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
...+++|+|+||++++|+|+ + .++++++|+.|||+|+||+++.|||++|+
T Consensus 436 ~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe 487 (666)
T PLN02614 436 DMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKRED 487 (666)
T ss_pred CcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHH
Confidence 35689999999999999983 3 34789999999999999999999999875
No 7
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.8e-53 Score=419.78 Aligned_cols=360 Identities=21% Similarity=0.229 Sum_probs=299.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.++++ |+++|+++.. ..++||+||.++++++|+.|.+ .+||+|+++++|+++++++++||++
T Consensus 19 ~~~~~~~~~~~~~~----p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~----~~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 19 KTVLESFLKLCSEM----TTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK----YPDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh----ccCCeEEEEcCCchHHHHHHHHHHh
Confidence 67999999999999 9999998762 3689999999999999999997 3899999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-------CeEEEeCCC----cchhhhcccC----Ccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-------HRTILIDSP----EFDSMTMSWN----SKH 182 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~~----~~~ 182 (409)
+|++++|+++..+.+++.++++.+++++++++.+....+.+.. ..++..+.. .+.+...... ...
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFE 169 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCch
Confidence 9999999999999999999999999999999877655543221 123322210 0001000000 000
Q ss_pred ----cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHH
Q 015325 183 ----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAA 257 (409)
Q Consensus 183 ----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~ 257 (409)
........++++++|+|||||||.||+|++||+++..........+ ....+|++++.+|++|.+++ ..++.++.
T Consensus 170 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 248 (539)
T PRK06334 170 WLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-SPKEDDVMMSFLPPFHAYGFNSCTLFPLL 248 (539)
T ss_pred hhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-CCCCCceEEEecchHhhhhhHHHHHHHHH
Confidence 0011234678999999999999999999999999998877776666 67889999999999999998 56789999
Q ss_pred hCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCce
Q 015325 258 LMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (409)
Q Consensus 258 ~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i 336 (409)
.|+++++.. .+++..+++.|+++++|++.++|+++..|++........+++||.+++||+++++++.++|++.|+++.+
T Consensus 249 ~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 328 (539)
T PRK06334 249 SGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQL 328 (539)
T ss_pred cCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeE
Confidence 999999875 5799999999999999999999999999988765555678899999999999999999999999988999
Q ss_pred ecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++.||+||++..++... .......+++|+|++|++++|+|+++++++++|+.|||+|+|++++.|||+++.
T Consensus 329 ~~~YG~TE~~~~~~~~~-~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~ 399 (539)
T PRK06334 329 RQGYGTTECSPVITINT-VNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDF 399 (539)
T ss_pred EecccccccCceEEecc-CCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcc
Confidence 99999999987665422 222234567999999999999997789999999999999999999999999874
No 8
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-53 Score=426.29 Aligned_cols=363 Identities=19% Similarity=0.218 Sum_probs=291.3
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCC---ceeeHHHHHHHHHHHHHHhHhcc---CCCCC-----------CEEE
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTG---LRVSFSEFTRRTNSLASYLQNVT---RLSKN-----------DTAF 99 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~~~---gv~~g-----------~~V~ 99 (409)
.-|+.++|.+.++++ |+++|+++...+ +++||+|+.+++.++|++|.+ . |+++| |+|+
T Consensus 60 ~~~l~~~l~~~~~~~----p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~-~~~~Gv~~g~~~~~~~~g~~d~V~ 134 (746)
T PTZ00342 60 YKHIMKLLLEKYKLN----NNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNT-YEGKGIPEKKYNEEQNNGKFKLLG 134 (746)
T ss_pred cchHHHHHHHHHhhc----CCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHH-HhhcCCCcCccccccccccccEEE
Confidence 479999999999999 999999874222 689999999999999999997 5 99999 9999
Q ss_pred EEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CC-eEEEeCCCcch-
Q 015325 100 VLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPEFD- 172 (409)
Q Consensus 100 i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~~~~- 172 (409)
|+++|+++|+++.+||+++|++.||+++.++.+++.+++++++++++|++.+..+.+.+. .+ .++.++.....
T Consensus 135 i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~ 214 (746)
T PTZ00342 135 LYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSK 214 (746)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccc
Confidence 999999999999999999999999999999999999999999999999987665554321 11 23344321000
Q ss_pred -------------------------------------------------------hhhcccCC---------------cc
Q 015325 173 -------------------------------------------------------SMTMSWNS---------------KH 182 (409)
Q Consensus 173 -------------------------------------------------------~~~~~~~~---------------~~ 182 (409)
++...... ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 294 (746)
T PTZ00342 215 EININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT 294 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc
Confidence 00000000 00
Q ss_pred cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC-CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCe
Q 015325 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRVSPAVMLFTMPYFHIYGLFFCFRAAALMET 261 (409)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~ 261 (409)
........++|+++|+|||||||.||||++||++++..+........ .....+++++.+|++|++++...+.++..|++
T Consensus 295 ~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~ 374 (746)
T PTZ00342 295 NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGT 374 (746)
T ss_pred CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCE
Confidence 00112345789999999999999999999999999988766543320 12356899999999999999777888999999
Q ss_pred EEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhC--------CCCCC------------------------------
Q 015325 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKG--------GSTDG------------------------------ 303 (409)
Q Consensus 262 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~--------~~~~~------------------------------ 303 (409)
+++.+. ++..+++.|+++++|+++++|.+++++... +..+.
T Consensus 375 i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 453 (746)
T PTZ00342 375 INIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISS 453 (746)
T ss_pred EEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 999875 899999999999999999999999988752 10000
Q ss_pred ----CCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCcccccc-CCceEEEecC
Q 015325 304 ----YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDP 378 (409)
Q Consensus 304 ----~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~-~~~~v~i~d~ 378 (409)
.-.++||.+++||+++++++.++|+..+ ++++++.||+||+++.++.. .......+++|+|+ |+++++|+|.
T Consensus 454 kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~--~~~~~~~gsvG~p~~pg~e~ki~d~ 530 (746)
T PTZ00342 454 KIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQ--HADDNNTESIGGPISPNTKYKVRTW 530 (746)
T ss_pred HHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeec--cCCCCCcccccCcCCCcEEEEEecc
Confidence 0025899999999999999999999988 89999999999998766542 23345678999998 9999999996
Q ss_pred CCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 379 ETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 379 ~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+++...+.+..|||+++||++|.|||++|+
T Consensus 531 ~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe 560 (746)
T PTZ00342 531 ETYKATDTLPKGELLIKSDSIFSGYFLEKE 560 (746)
T ss_pred cccccCCCCCceEEEEecCcccccccCChh
Confidence 666666666789999999999999999875
No 9
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-53 Score=418.55 Aligned_cols=355 Identities=21% Similarity=0.240 Sum_probs=302.7
Q ss_pred CHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHh
Q 015325 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (409)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~ 118 (409)
++.+++.+.++++ ||++|++++ ++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++
T Consensus 50 ~~~~~~~~~a~~~----pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 122 (549)
T PRK07788 50 PFAGLVAHAARRA----PDRAALIDE--RGTLTYAELDEQSNALARGLLA-LGVRAGDGVAVLARNHRGFVLALYAAGKV 122 (549)
T ss_pred hHHHHHHHHHHHC----CCceEEEEC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 7899999999988 999999987 7899999999999999999999 99999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-----CeEEEeCC----------CcchhhhcccCCccc
Q 015325 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTILIDS----------PEFDSMTMSWNSKHE 183 (409)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~----------~~~~~~~~~~~~~~~ 183 (409)
|++++|+++.++.+++.+++++++++++|++++....+.... ...+.... ..++++.....
T Consensus 123 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 198 (549)
T PRK07788 123 GARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSS---- 198 (549)
T ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCC----
Confidence 999999999999999999999999999999987766554321 12221111 12222222211
Q ss_pred ccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEE
Q 015325 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAV 263 (409)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v 263 (409)
........++.++++|||||||.||+|.++|+++...+......+ .....++++...|++|.+++..++.++..|++++
T Consensus 199 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v 277 (549)
T PRK07788 199 TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-PFRAGETTLLPAPMFHATGWAHLTLAMALGSTVV 277 (549)
T ss_pred CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-CCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEE
Confidence 111123356789999999999999999999999998877777777 6788999999999999999977888999999999
Q ss_pred EecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCC--CCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccC
Q 015325 264 VMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (409)
Q Consensus 264 ~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 341 (409)
+...+++..+++.++++++|++.++|+++..+++.... ...++++||.+++||+++++++.++|++.| +..+++.||
T Consensus 278 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 356 (549)
T PRK07788 278 LRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYG 356 (549)
T ss_pred ECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccC
Confidence 99889999999999999999999999999999987654 455688999999999999999999999999 788999999
Q ss_pred cccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+||++...+.. .......++++|+|+++++++|+| ++|++++.|+.|||+|+|+.++.||++++.
T Consensus 357 ~TE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~ 421 (549)
T PRK07788 357 STEVAFATIAT-PEDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRD 421 (549)
T ss_pred cchhchhhccC-hhhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCc
Confidence 99987644332 122234567899999999999999 899999999999999999999999998764
No 10
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.2e-52 Score=409.63 Aligned_cols=376 Identities=34% Similarity=0.514 Sum_probs=312.9
Q ss_pred eecCCCCCCCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEE
Q 015325 22 FHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVL 101 (409)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~ 101 (409)
+.+..+..+++. .+|+.+++.+++.++ |+++|+++..+++++||.||.++++++|+.|++ .|+++||+|+++
T Consensus 10 ~~~~~~~~~~~~---~~~~~~~l~~~~~~~----~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-~g~~~gd~V~i~ 81 (537)
T PLN02246 10 FRSKLPDIYIPN---HLPLHDYCFERLSEF----SDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-LGIRQGDVVMLL 81 (537)
T ss_pred ecCCCCCCCCCC---CCcHHHHHHHHHHhC----CCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEE
Confidence 344444444443 479999999999988 999999986556789999999999999999999 999999999999
Q ss_pred cCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCeEEEeCCCc-----ch
Q 015325 102 STNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSPE-----FD 172 (409)
Q Consensus 102 ~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~~-----~~ 172 (409)
++|+.+++++++||+++|++++|+++..+.+++..+++.+++++++++......+.+. ...++.++... +.
T Consensus 82 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 161 (537)
T PLN02246 82 LPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFS 161 (537)
T ss_pred CCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHH
Confidence 9999999999999999999999999999999999999999999999988766554332 23344443211 12
Q ss_pred hhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc----cCCCCCCCCEEEEeCchhhHHh
Q 015325 173 SMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA----SSPKRVSPAVMLFTMPYFHIYG 248 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~d~~l~~~p~~~~~g 248 (409)
++..... .........++++++++|||||||.||+|+++|+++......... .+ .+..+|++++..|++|.++
T Consensus 162 ~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 162 ELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL-YFHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcccccc-CCCCCcEEEEeechHHHHH
Confidence 2221111 012223345789999999999999999999999999877665433 34 5788999999999999999
Q ss_pred H-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHH
Q 015325 249 L-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAF 327 (409)
Q Consensus 249 ~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~ 327 (409)
+ ..++.++..|+++++.+.+++..++..|+++++|++.++|+++..|.+........++++|.+++||+++++++.+.|
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~ 318 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAF 318 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHH
Confidence 8 667889999999999999999999999999999999999999999988766555678899999999999999999999
Q ss_pred HHhCCCCceecccCcccccceecccCC---CCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccC
Q 015325 328 ASKFPKVVLVQAYGLTESTAGVFRTVG---PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIF 404 (409)
Q Consensus 328 ~~~~~~~~i~~~yG~tE~~~~~~~~~~---~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~ 404 (409)
++.|++..+++.||+||++..++.... ......++++|+|+++++++|+|++++++++.|+.|||+++|+.++.|||
T Consensus 319 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~ 398 (537)
T PLN02246 319 RAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYL 398 (537)
T ss_pred HHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhcccc
Confidence 999989999999999999765443111 11223457899999999999999889999999999999999999999999
Q ss_pred CCCC
Q 015325 405 LPHF 408 (409)
Q Consensus 405 ~~~~ 408 (409)
+++.
T Consensus 399 ~~~~ 402 (537)
T PLN02246 399 NDPE 402 (537)
T ss_pred CCch
Confidence 9864
No 11
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-52 Score=421.92 Aligned_cols=361 Identities=22% Similarity=0.292 Sum_probs=283.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeC-----CCC--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINS-----VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
.|+.++|.+.++++ |+++|+... ..+ +++||+||.++++++|++|.+ +|+++||+|+|+++|+++|++
T Consensus 43 ~t~~~~l~~~~~~~----p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~ 117 (660)
T PLN02861 43 DSPWQFFSDAVKKY----PNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-RGVNPGDRCGIYGSNCPEWII 117 (660)
T ss_pred CCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 58899999999999 999999641 112 479999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc------CCe-EEEeCCC--------------
Q 015325 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHR-TILIDSP-------------- 169 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~~~~~~~-------------- 169 (409)
+++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+ ++..+..
T Consensus 118 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 197 (660)
T PLN02861 118 AMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVS 197 (660)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcE
Confidence 9999999999999999999999999999999999999987655443221 122 2222211
Q ss_pred --cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC----CCCCCCEEEEeCch
Q 015325 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPY 243 (409)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~----~~~~~d~~l~~~p~ 243 (409)
.+.++...... ........++|+++|+|||||||.||||++||++++..+......+. ....+|++++.+|+
T Consensus 198 ~~~~~~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 275 (660)
T PLN02861 198 CFSWEEFSLMGSL--DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPL 275 (660)
T ss_pred EEEHHHHHHhCcc--cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcH
Confidence 12222221110 11112345789999999999999999999999999988766555431 14678999999999
Q ss_pred hhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCC------------------------
Q 015325 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG------------------------ 299 (409)
Q Consensus 244 ~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~------------------------ 299 (409)
+|.++....+.++..|+++++.. +++..+++.|+++++|+++++|.+++.+....
T Consensus 276 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 354 (660)
T PLN02861 276 AHVYDQVIETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLG 354 (660)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999855666899999998874 58999999999999999999999999886410
Q ss_pred -------------CCCCC-------CC-CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCC
Q 015325 300 -------------STDGY-------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (409)
Q Consensus 300 -------------~~~~~-------~l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 358 (409)
..... .+ .+||.+++||+++++++. +|.+.++...+++.||+||+++.++... ....
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~-~~~~ 432 (660)
T PLN02861 355 NLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSI-ANVF 432 (660)
T ss_pred HHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeecc-cccC
Confidence 00000 01 479999999999999975 5667764457999999999976554422 1222
Q ss_pred CCCCccccccCCceEEEec-CCCC-CCCCCCCcceEEEecCccccccCCCCC
Q 015325 359 RRWGSTGRLSAGLEAKIVD-PETG-DSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 359 ~~~~s~G~p~~~~~v~i~d-~~~g-~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
...+++|+|+|+++++|+| +++| ..+++++.|||+|+||+++.|||++|+
T Consensus 433 ~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe 484 (660)
T PLN02861 433 SMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQD 484 (660)
T ss_pred CCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHH
Confidence 3568999999999999998 3445 455667789999999999999999875
No 12
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.6e-52 Score=416.45 Aligned_cols=363 Identities=21% Similarity=0.227 Sum_probs=292.1
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEe---CCC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALIN---SVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~---~~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~ 107 (409)
....++.++|...++++ |+++|+.. .+. -+.+||+||.++++++|++|++ .|+++||+|+|+++|+++
T Consensus 41 ~~~~tl~~~l~~~a~~~----p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e 115 (651)
T PLN02736 41 PEIGTLHDNFVYAVETF----RDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-HGIPKGACVGLYFINRPE 115 (651)
T ss_pred CCCCCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHH
Confidence 33468999999999988 99999942 111 1469999999999999999999 999999999999999999
Q ss_pred hHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCe-EEEeCCC------------
Q 015325 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP------------ 169 (409)
Q Consensus 108 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~------------ 169 (409)
|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+ ++..+..
T Consensus 116 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~ 195 (651)
T PLN02736 116 WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTG 195 (651)
T ss_pred HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCC
Confidence 9999999999999999999999999999999999999999987765544321 112 2222210
Q ss_pred ----cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhh
Q 015325 170 ----EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFH 245 (409)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 245 (409)
.++++....... ........++++++|+|||||||.||||++||++++..+......+ ...+.|++++.+|++|
T Consensus 196 ~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-~~~~~d~~l~~lPl~h 273 (651)
T PLN02736 196 VEIVTYSKLLAQGRSS-PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-KFYPSDVHISYLPLAH 273 (651)
T ss_pred cEEEEHHHHHHhcccC-CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-CCCCCCEEEEeCCHHH
Confidence 122222221110 1112234678999999999999999999999999999888887777 6888999999999999
Q ss_pred HHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCC-------------------------
Q 015325 246 IYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS------------------------- 300 (409)
Q Consensus 246 ~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~------------------------- 300 (409)
.+++..++.++..|+++++.+. ++..+++.|+++++|+++++|.++..+.+...
T Consensus 274 ~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (651)
T PLN02736 274 IYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQAL 352 (651)
T ss_pred HHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999888889999999988875 78999999999999999999999988765310
Q ss_pred ---CC-C------------CCC-CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCc
Q 015325 301 ---TD-G------------YDL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (409)
Q Consensus 301 ---~~-~------------~~l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s 363 (409)
.. . ..+ ++||.+++||+++++++.+++++.+ ++++++.||+||+++.++.. .......++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~--~~~~~~~~~ 429 (651)
T PLN02736 353 ENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGM--DEGDNLSGH 429 (651)
T ss_pred HcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheecc--CCCCCCCCc
Confidence 00 0 001 4799999999999999999999988 88999999999998766542 223356789
Q ss_pred cccccCCceEEEecCCCCC---CCCCCCcceEEEecCccccccCCCCC
Q 015325 364 TGRLSAGLEAKIVDPETGD---SLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 364 ~G~p~~~~~v~i~d~~~g~---~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+|+|+||++++|+|.+++. ...++..|||+|+||++|.|||++|+
T Consensus 430 vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~ 477 (651)
T PLN02736 430 VGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEV 477 (651)
T ss_pred cCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHH
Confidence 9999999999999944433 22344579999999999999999874
No 13
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=7.6e-52 Score=416.74 Aligned_cols=365 Identities=17% Similarity=0.205 Sum_probs=292.6
Q ss_pred CCCCCHHHHHhhccC--CCCCCCCCCcEEEeCC----CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCch
Q 015325 35 DAPISAVDYVSSLRA--TLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~--~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~ 108 (409)
+..+|++..+.++.. .+ |+++|+++.. ..+++||+||.++++++|+.|++ .|+++||+|+++++|++++
T Consensus 84 g~~~N~~~~~l~~~~~~~~----~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~pn~~e~ 158 (666)
T PLN02654 84 GGKTNICYNCLDRNVEAGN----GDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-VGVKKGDAVVIYLPMLMEL 158 (666)
T ss_pred CCEeeHHHHHHHHhhccCC----CCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHH
Confidence 556899887776543 35 9999998742 13689999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHH---------H----hhc-----CCe-EEEeCCC
Q 015325 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHK---------L----AKL-----KHR-TILIDSP 169 (409)
Q Consensus 109 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~----~~~-----~~~-~~~~~~~ 169 (409)
++++|||+++|++++|+++.++.+++..++++++++++|+++..... + ... ... ++.....
T Consensus 159 v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
T PLN02654 159 PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQ 238 (666)
T ss_pred HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccc
Confidence 99999999999999999999999999999999999999998753211 1 000 000 1111110
Q ss_pred ----------------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHH-HHhhccCCCCC
Q 015325 170 ----------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV-ASSFASSPKRV 232 (409)
Q Consensus 170 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~ 232 (409)
.|+++..... ..........+++++|+|||||||.||||+++|++++... ......+ .++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-~~~ 315 (666)
T PLN02654 239 LAMKREDTKWQEGRDVWWQDVVPNYP--TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-DYK 315 (666)
T ss_pred ccccccccccccCCcccHHHHhhcCC--CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-CCC
Confidence 0111111100 0111122467899999999999999999999999986443 4444555 688
Q ss_pred CCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCC
Q 015325 233 SPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYD 305 (409)
Q Consensus 233 ~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~ 305 (409)
++|++++..|++|.++. +.++.+++.|+++++.++ +++..+++.|+++++|++.++|+++..|.+... ....+
T Consensus 316 ~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 395 (666)
T PLN02654 316 PTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHS 395 (666)
T ss_pred CCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCC
Confidence 99999999999999987 678899999999999864 589999999999999999999999999998653 23456
Q ss_pred CCCcceeeecCCCCCHHHHHHHHHhCCC--CceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCC
Q 015325 306 LSSLETVACGAAPLGKDTIMAFASKFPK--VVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDS 383 (409)
Q Consensus 306 l~~Lr~v~~~G~~~~~~~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~ 383 (409)
+++||.++++|+++++++++++.+.++. +++.+.||+||+++..+..........++++|+|++|++++|+| ++|++
T Consensus 396 l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~ 474 (666)
T PLN02654 396 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKE 474 (666)
T ss_pred hhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCC
Confidence 8899999999999999999999999842 78999999999987655422111235678999999999999999 89999
Q ss_pred CCCCCcceEEEec--CccccccCCCCC
Q 015325 384 LPPGKEGELSIRG--PTIMKGIFLPHF 408 (409)
Q Consensus 384 ~~~g~~Gei~v~g--~~v~~gY~~~~~ 408 (409)
++.|+.|||++++ |+++.|||++++
T Consensus 475 ~~~~~~Gel~v~~~~p~~~~gy~~~~~ 501 (666)
T PLN02654 475 IEGECSGYLCVKKSWPGAFRTLYGDHE 501 (666)
T ss_pred CCCCCceEEEEcCCCchhhhhhcCChH
Confidence 9999999999999 799999999874
No 14
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.2e-51 Score=409.36 Aligned_cols=360 Identities=22% Similarity=0.255 Sum_probs=293.5
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
+.+.|+.+.|.+.+.++ |+++|++++ ++++||+||.++++++|++|.+ .|+++||+|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~Gv~~gd~V~v~~~n~~~~~~~~la 76 (563)
T PLN02860 4 HSQAHICQCLTRLATLR----GNAVVTISG--NRRRTGHEFVDGVLSLAAGLLR-LGLRNGDVVAIAALNSDLYLEWLLA 76 (563)
T ss_pred hhhhHHHHHHHHHHHhc----CCceEEecC--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 44589999999999999 999999986 7899999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc------CCe-EEEeCCCc------chhhhcccC--
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHR-TILIDSPE------FDSMTMSWN-- 179 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~~~~~~~~------~~~~~~~~~-- 179 (409)
|+++|++++|+++.++.+++.++++++++++++++++........ ... .+..+... +........
T Consensus 77 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (563)
T PLN02860 77 VACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLK 156 (563)
T ss_pred HhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhc
Confidence 999999999999999999999999999999999987542222111 111 11111110 111110000
Q ss_pred ---CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHH
Q 015325 180 ---SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAA 256 (409)
Q Consensus 180 ---~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l 256 (409)
...........++++++++|||||||.||+|.++|+++..........+ +..+.|+++...|++|.+++..++.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l 235 (563)
T PLN02860 157 QRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-GYGEDDVYLHTAPLCHIGGLSSALAML 235 (563)
T ss_pred cCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-CCCCCCEEEEecCchhhccHHHHHHHH
Confidence 0000111234568899999999999999999999999987776665556 678899999999999999998889999
Q ss_pred HhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCC--CCCCCCCcceeeecCCCCCHHHHHHHHHhCCCC
Q 015325 257 ALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKV 334 (409)
Q Consensus 257 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~ 334 (409)
..|+++++.+.+++..+++.|+++++|++.++|+++..|++.... ....+++||.+++||+++++++.++|++.|+++
T Consensus 236 ~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~ 315 (563)
T PLN02860 236 MVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNA 315 (563)
T ss_pred HcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999876432 234578999999999999999999999999889
Q ss_pred ceecccCcccccceecccCCCC---------------------CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEE
Q 015325 335 VLVQAYGLTESTAGVFRTVGPD---------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELS 393 (409)
Q Consensus 335 ~i~~~yG~tE~~~~~~~~~~~~---------------------~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~ 393 (409)
++++.||+||+++.++...... ......++|+|+++++++|+|+ + +|+.|||+
T Consensus 316 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~-~-----~g~~Gel~ 389 (563)
T PLN02860 316 KLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLD-E-----SSRVGRIL 389 (563)
T ss_pred ceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecC-C-----CCceeEEE
Confidence 9999999999976544321111 0111236899999999999994 3 68999999
Q ss_pred EecCccccccCCCCC
Q 015325 394 IRGPTIMKGIFLPHF 408 (409)
Q Consensus 394 v~g~~v~~gY~~~~~ 408 (409)
++|++++.|||++|.
T Consensus 390 v~g~~~~~GY~~~~~ 404 (563)
T PLN02860 390 TRGPHVMLGYWGQNS 404 (563)
T ss_pred EecCcccccccCCcc
Confidence 999999999999875
No 15
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-51 Score=405.85 Aligned_cols=357 Identities=28% Similarity=0.422 Sum_probs=305.5
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhcc-CCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT-RLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~-gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
.++.+.|.+.+.++ |+++|+++. ++++||+||.+++.++|+.|.+ . |+++|++|+++++|+.+++++++||+
T Consensus 10 ~tl~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 10 TSLFHNLEVSARRY----PDKTAIVFY--GRAISYRELLEEAERLAGYLQQ-ECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCHHHHHHHHHHHc----CCCcceeec--CceecHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 78999999999888 999999987 7899999999999999999999 8 99999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCe-EEEeCCC----------------------
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSP---------------------- 169 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~---------------------- 169 (409)
++|++++|+++..+.+++.++++++++++++++......+... ..+ ++.....
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQ 162 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccc
Confidence 9999999999999999999999999999999988766554422 111 1111100
Q ss_pred --------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeC
Q 015325 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (409)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 241 (409)
.+++...... ........++++++++|||||||.||+|.++|++++..+......+ .....|++++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~ 238 (546)
T PRK08314 163 ALAPGGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-NSTPESVVLAVL 238 (546)
T ss_pred cccccccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCceEEEEc
Confidence 0111111000 1112234568999999999999999999999999999888877777 688999999999
Q ss_pred chhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCC
Q 015325 242 PYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (409)
Q Consensus 242 p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~ 320 (409)
|++|.+|+ ..++.++..|+++++.+.+++..++..++++++|++.++|+++..++........++++||.+++||++++
T Consensus 239 p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 239 PLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 99999998 77889999999999999999999999999999999999999999998876555667789999999999999
Q ss_pred HHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccc
Q 015325 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (409)
Q Consensus 321 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~ 400 (409)
+++.++|.+.| +.++++.||+||++..... ........+++|+|++|++++|+|++++++++.|+.|||+|+|++++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~--~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHS--NPPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceec--CCCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 99999999999 8999999999999876544 22223345789999999999999988999999999999999999999
Q ss_pred cccCCCCC
Q 015325 401 KGIFLPHF 408 (409)
Q Consensus 401 ~gY~~~~~ 408 (409)
.||++++.
T Consensus 396 ~gY~~~~~ 403 (546)
T PRK08314 396 KGYWNRPE 403 (546)
T ss_pred ccccCChh
Confidence 99999763
No 16
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=7.2e-53 Score=403.80 Aligned_cols=352 Identities=30% Similarity=0.444 Sum_probs=284.0
Q ss_pred hhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEcc
Q 015325 45 SSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISP 124 (409)
Q Consensus 45 ~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~ 124 (409)
.++++++ ||++|+++ ..++++||+||+++++++|..|++ +|+++|++|+++++|+.+++++++||+++|++++|
T Consensus 2 ~~~a~~~----pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~-~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 2 ERQAQRY----PDRIALID-DEGRSLTYKQLYERVRKLAAALRK-LGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHHHS----TTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHH-TTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred hhHHhhC----CCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHH-hCCCccccccccCCccceeeeeecccccccccccc
Confidence 4566667 99999999 338999999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhcCCeEEEE----cCchHHHHhh----c--CCeEEEeCCCcchh---hhcccCCcccccccc-cC
Q 015325 125 ANPVNTESEISRQIQLSNPVIAFA----TSSVVHKLAK----L--KHRTILIDSPEFDS---MTMSWNSKHELDRAK-VC 190 (409)
Q Consensus 125 l~~~~~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~----~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~ 190 (409)
++|.++.+++.+++++++++++|+ +......+.. . ...+..++...+.. +...... ...... ..
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 153 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLS--DEPQSPEDS 153 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHC--HCSHSTTHT
T ss_pred cccccccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccccccc--cccccCCCC
Confidence 999999999999999999999997 2222221211 1 11244444322211 1111000 000000 05
Q ss_pred CCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhh--ccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecC
Q 015325 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSF--ASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR 267 (409)
Q Consensus 191 ~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~ 267 (409)
++++++++|||||||.||+|.++|++++..+..+. ... ..+ |++++.+|++|.+++ ..++.++..|+++++.+.
T Consensus 154 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 230 (417)
T PF00501_consen 154 PDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF-GLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSP 230 (417)
T ss_dssp TTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT-TTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESS
T ss_pred ccceeEeecccccccccccccccccccccccccccccccc-ccC--ceEEeecccccccccccccccccccccccccccc
Confidence 68999999999999999999999999998877754 222 223 699999999999999 999999999999999987
Q ss_pred CC---HHHHHHHHHHhcceeEeechHHHHHHHhCCCC----CCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceeccc
Q 015325 268 FD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (409)
Q Consensus 268 ~~---~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~----~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 340 (409)
.. ++.+++.++++++|++.++|+++..+++.... ...++++||.++++|+++++++.+++++.++.+++++.|
T Consensus 231 ~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 310 (417)
T PF00501_consen 231 FDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLY 310 (417)
T ss_dssp HHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEE
T ss_pred ccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecc
Confidence 54 47789999999999999999999999984322 235788899999999999999999999999556999999
Q ss_pred CcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCC
Q 015325 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~ 407 (409)
|+||++..++...........+++|+|+|+++++|+|+++++++++|+.|||+|+||+++.||+++|
T Consensus 311 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~ 377 (417)
T PF00501_consen 311 GSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDP 377 (417)
T ss_dssp EEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBH
T ss_pred cccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCccceeeeccc
Confidence 9999999887533234445678899999999999999777999999999999999999999999974
No 17
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.8e-51 Score=404.05 Aligned_cols=363 Identities=22% Similarity=0.325 Sum_probs=303.6
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~ 113 (409)
.++.+.|.+.++.+ |+++|+++... .+.+||.||.++++++|++|++ .|+++|++|+++++|++++++++|
T Consensus 24 ~~l~~~l~~~a~~~----p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 24 RTINDDLDACVASC----PDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-LGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHH
Confidence 78999999999988 99999998631 1789999999999999999999 999999999999999999999999
Q ss_pred HHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH-----HHHhh----c-CC-eEEEeCC---CcchhhhcccC
Q 015325 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAK----L-KH-RTILIDS---PEFDSMTMSWN 179 (409)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~----~-~~-~~~~~~~---~~~~~~~~~~~ 179 (409)
|++++|++++|+++..+.+++.++++.++++++++++... ..+.+ . .. .++.++. ..+.++.....
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPA 178 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCc
Confidence 9999999999999999999999999999999999987531 11111 1 11 2223322 12333322110
Q ss_pred --C---c-ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHH
Q 015325 180 --S---K-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (409)
Q Consensus 180 --~---~-~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~ 252 (409)
. . .........++++++++|||||||.||+|+++|+++...+......+ .+.+.+++++..|++|.+++ ..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~ 257 (547)
T PRK13295 179 WEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-GLGADDVILMASPMAHQTGFMYGL 257 (547)
T ss_pred cccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-CCCCCCeEEEecCchhhhhHHHHH
Confidence 0 0 01111234568899999999999999999999999998888777777 68889999999999999987 778
Q ss_pred HHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCC
Q 015325 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (409)
Q Consensus 253 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~ 332 (409)
+.++..|+++++.+.+++..+++.++++++|.+.++|+++..+..........+++||.+++||+++++++.+++++.+
T Consensus 258 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~- 336 (547)
T PRK13295 258 MMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL- 336 (547)
T ss_pred HHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-
Confidence 9999999999999988999999999999999999999999999987665566788999999999999999999999999
Q ss_pred CCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++++++.||+||++...+............++|+|+++++++|+| +++++++.|+.|||+|+|++++.||+++|.
T Consensus 337 ~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~ 411 (547)
T PRK13295 337 GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQ 411 (547)
T ss_pred CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCcc
Confidence 999999999999987655432222223356899999999999999 789999999999999999999999999864
No 18
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=5.6e-52 Score=398.09 Aligned_cols=350 Identities=27% Similarity=0.333 Sum_probs=280.0
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCC--CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
.++...+.++++.+ |+.+|+..... -+.+||+|+.+++.++|++|++ .|+.+||+|+|++.|+++|+++.+||
T Consensus 16 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-lg~~~gdrvai~a~nr~eW~i~d~a~ 90 (613)
T COG1022 16 HTLPKRLAERVKDR----PDGVALMYKELGGWEAITYRELYERVRALASGLLS-LGIPAGDRVAIFAANRPEWAIADLAI 90 (613)
T ss_pred ccHHHHHHHHhhcC----CcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 67889999999999 88889986533 3789999999999999999999 99988999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHh-hcCC---eEEEe----C---------CCcchhhhccc
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA-KLKH---RTILI----D---------SPEFDSMTMSW 178 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-~~~~---~~~~~----~---------~~~~~~~~~~~ 178 (409)
+.+|++.||+.+....+++.++|++++++++|++........ .... .+..+ + ...++......
T Consensus 91 ~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (613)
T COG1022 91 LALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEG 170 (613)
T ss_pred HHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhcccccccccc
Confidence 999999999999999999999999999999999985433322 1110 00000 0 00011100000
Q ss_pred -------CCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHH
Q 015325 179 -------NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF 251 (409)
Q Consensus 179 -------~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~ 251 (409)
.........+..++|+|.|+|||||||.||||++||+|+++++..+....+...++|+.++.+|+.|++....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~ 250 (613)
T COG1022 171 ISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAF 250 (613)
T ss_pred chhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHH
Confidence 0000111235678999999999999999999999999999999999998833889999999999999999854
Q ss_pred -HHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--------CC--------------------
Q 015325 252 -CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--------TD-------------------- 302 (409)
Q Consensus 252 -~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--------~~-------------------- 302 (409)
....+..| .......++..++..+.+++||.++++|.+++.+-+... .+
T Consensus 251 ~~~~~~~~g--~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~ 328 (613)
T COG1022 251 EGGLALYGG--VTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALL 328 (613)
T ss_pred HHHHHhhcc--eEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 33333333 333334589999999999999999999998875543211 00
Q ss_pred -------------------CCCC-CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCC
Q 015325 303 -------------------GYDL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWG 362 (409)
Q Consensus 303 -------------------~~~l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~ 362 (409)
...+ .++|++++||+++++++...|+.. |+++.++||+||+++.++. +.+.....+
T Consensus 329 ~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v--~~~~~~~~g 404 (613)
T COG1022 329 GGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSV--NPPDRFVLG 404 (613)
T ss_pred ccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEE--ccccCcccC
Confidence 0001 379999999999999999999998 8999999999999988877 566778899
Q ss_pred ccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCCC
Q 015325 363 STGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHFE 409 (409)
Q Consensus 363 s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~~ 409 (409)
++|+|+|+++++|+| + |||+||||.||+|||++|++
T Consensus 405 tvG~p~p~~evKI~d-~----------GEilVRG~~Vm~GYyk~pe~ 440 (613)
T COG1022 405 TVGKPLPGIEVKIAD-D----------GEILVRGPNVMKGYYKNPEA 440 (613)
T ss_pred CcCCcCCCceEEEcc-C----------ceEEEecchhcchhcCChHH
Confidence 999999999999999 4 99999999999999999964
No 19
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.3e-50 Score=400.90 Aligned_cols=367 Identities=33% Similarity=0.519 Sum_probs=304.8
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
..|+.+.+.+.+..+ |+++|+++..+++.+||.||.+++.++|+.|++ .|+++|++|+++++|+++++++++||+
T Consensus 27 ~~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~ 101 (546)
T PLN02330 27 KLTLPDFVLQDAELY----ADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-LGLRKGQVVVVVLPNVAEYGIVALGIM 101 (546)
T ss_pred CCcHHHHHhhhhhcC----CCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 488999999999988 999999976456899999999999999999999 999999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCC------CcchhhhcccCCcc-ccccccc
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS------PEFDSMTMSWNSKH-ELDRAKV 189 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~ 189 (409)
++|++++|+++..+.+++.+++++++++++++++.....+......++.++. ..|.++........ .......
T Consensus 102 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (546)
T PLN02330 102 AAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLEAADRAGDTSDNEEI 181 (546)
T ss_pred HhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHhhccccCcccccccC
Confidence 9999999999999999999999999999999999887777665555554432 23444443321110 1112234
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC-CCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR 267 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~ 267 (409)
.++++++++|||||||.||+|.++|+++...+....... ......++.+...|++|.+++ ..++.++..|+++++.+.
T Consensus 182 ~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~ 261 (546)
T PLN02330 182 LQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSR 261 (546)
T ss_pred CcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecc
Confidence 568899999999999999999999999887654322222 122345689999999999998 567889999999999999
Q ss_pred CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCC--CcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccc
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS--SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~--~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 345 (409)
+++..+++.++++++|.+.++|+++..+++.......++. ++|.+++||+++++++.++|.+.|+++++++.||+||+
T Consensus 262 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 341 (546)
T PLN02330 262 FELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEH 341 (546)
T ss_pred cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEeccccccc
Confidence 9999999999999999999999999999987554444444 47999999999999999999999999999999999999
Q ss_pred cceecccCCCC---CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 346 TAGVFRTVGPD---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 346 ~~~~~~~~~~~---~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+.......... ......++|.|+++++++|+|+++++++++|+.|||+++|++++.||++++.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~ 407 (546)
T PLN02330 342 SCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKE 407 (546)
T ss_pred ccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCcc
Confidence 76543321111 1234568999999999999998899999999999999999999999999874
No 20
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=7.5e-51 Score=408.24 Aligned_cols=366 Identities=17% Similarity=0.216 Sum_probs=291.1
Q ss_pred CCCCCHHHHHh-hccCCCCCCCCCCcEEEeCC----CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchH
Q 015325 35 DAPISAVDYVS-SLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (409)
Q Consensus 35 ~~~~~~~~~l~-~~~~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~ 109 (409)
+..+|+...+. +.+..+ |+++|+++.. ..+++||+||.++++++|++|++ .|+++||+|+++++|+++++
T Consensus 48 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~n~~e~v 122 (628)
T TIGR02316 48 GGRTNLCHNALDRHLDER----GEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-LGVGRGDRVLIYMPMIAEAV 122 (628)
T ss_pred CCEeeHHHHHHHHHhCcC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 55588876544 445556 9999999731 24689999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH---------HHH----hh---cCCeEEEeCCC----
Q 015325 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AK---LKHRTILIDSP---- 169 (409)
Q Consensus 110 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~---~~~~~~~~~~~---- 169 (409)
++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+ .. ....++..+..
T Consensus 123 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 202 (628)
T TIGR02316 123 FAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM 202 (628)
T ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 99999999999999999999999999999999999999976421 111 11 11223333311
Q ss_pred --------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHH-HHhhccCCCCCCCCEEEEe
Q 015325 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV-ASSFASSPKRVSPAVMLFT 240 (409)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~-~~~~~~~~~~~~~d~~l~~ 240 (409)
.+.++...... .........++++++|+|||||||.||||+++|++++... ......+ +++++|++++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~ 280 (628)
T TIGR02316 203 RLIPGRDVDYAALRTQHED-AQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-GIRAGQVMFSA 280 (628)
T ss_pred CcccCccccHHHHhhcccc-CCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-CCCCCcEEEEc
Confidence 12222111100 0111122456899999999999999999999999976443 3344445 67889999999
Q ss_pred CchhhHHhH-HHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceee
Q 015325 241 MPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVA 313 (409)
Q Consensus 241 ~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~ 313 (409)
.|++|..+. ..++.++..|+++++.++ +++..+++.|+++++|++.++|++++.|.+... ....++++||.++
T Consensus 281 ~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~ 360 (628)
T TIGR02316 281 SDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLF 360 (628)
T ss_pred CCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEE
Confidence 999999887 678999999999999863 578999999999999999999999999987643 2345689999999
Q ss_pred ecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC--CCCCCCCCccccccCCceEEEecCCCCCCCCCCCcce
Q 015325 314 CGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG--PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (409)
Q Consensus 314 ~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~--~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Ge 391 (409)
+||+++++++.+++++.+ +..+++.||+||++..++.... .......+++|+|++|++++|+|+++|++++.|+.||
T Consensus 361 ~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Ge 439 (628)
T TIGR02316 361 LAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGV 439 (628)
T ss_pred EecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEE
Confidence 999999999999999988 7899999999999854433211 1123456889999999999999965899999999999
Q ss_pred EEEecC---ccccccCCCCC
Q 015325 392 LSIRGP---TIMKGIFLPHF 408 (409)
Q Consensus 392 i~v~g~---~v~~gY~~~~~ 408 (409)
|+++|| +.+.|||+++.
T Consensus 440 l~v~gp~~~g~~~~~~~~~~ 459 (628)
T TIGR02316 440 LTVVPPLPPGCLSTVWGDDA 459 (628)
T ss_pred EEEecCCCccccccccCChH
Confidence 999998 57899998763
No 21
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.2e-50 Score=407.22 Aligned_cols=365 Identities=19% Similarity=0.224 Sum_probs=293.6
Q ss_pred CCCCCHHHHHhhc-cCCCCCCCCCCcEEEeCCC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchH
Q 015325 35 DAPISAVDYVSSL-RATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (409)
Q Consensus 35 ~~~~~~~~~l~~~-~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~ 109 (409)
+..+|+...+.++ ++.+ |+++|+++..+ .+++||+||.+++.++|+.|++ +|+++||+|+++++|+++++
T Consensus 53 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 127 (625)
T TIGR02188 53 GGELNVSYNCVDRHLEAR----PDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-LGVKKGDRVAIYMPMIPEAA 127 (625)
T ss_pred CCEEEHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHH
Confidence 4557887766654 4445 99999987522 3589999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH---------HH----HhhcC--Ce-EEEeCCC----
Q 015325 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HK----LAKLK--HR-TILIDSP---- 169 (409)
Q Consensus 110 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~----~~~~~--~~-~~~~~~~---- 169 (409)
++++||+++|++++++++.++.+++.+++++++++++|+++... .. +.... .+ ++..+..
T Consensus 128 ~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (625)
T TIGR02188 128 IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPV 207 (625)
T ss_pred HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCc
Confidence 99999999999999999999999999999999999999986532 11 11111 11 2222210
Q ss_pred --------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHh-hccCCCCCCCCEEEEe
Q 015325 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS-FASSPKRVSPAVMLFT 240 (409)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~-~~~~~~~~~~d~~l~~ 240 (409)
.++++...... ........++++++|+|||||||.||||+++|++++...... ...+ .+.++|++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-~~~~~d~~~~~ 284 (625)
T TIGR02188 208 PWVEGRDVWWHDLMAKASA--YCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF-DIKDGDIFWCT 284 (625)
T ss_pred CccccccccHHHHHhhcCC--CCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc-CCCCCcEEEEC
Confidence 12222221110 112234567899999999999999999999999987554433 3344 67889999999
Q ss_pred CchhhHHhH-HHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCC--CCCCCCCcceee
Q 015325 241 MPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVA 313 (409)
Q Consensus 241 ~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~Lr~v~ 313 (409)
.|++|..+. +.++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|.+.... ...++++||.++
T Consensus 285 ~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~ 364 (625)
T TIGR02188 285 ADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLG 364 (625)
T ss_pred CCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEE
Confidence 999999887 678999999999999853 4799999999999999999999999999886532 345688999999
Q ss_pred ecCCCCCHHHHHHHHHhCC--CCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCC-CCCcc
Q 015325 314 CGAAPLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLP-PGKEG 390 (409)
Q Consensus 314 ~~G~~~~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~-~g~~G 390 (409)
++|+++++++++++.+.++ ++++++.||+||+++.++.........+++++|+|++|++++|+| ++|++++ +|+.|
T Consensus 365 ~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~G 443 (625)
T TIGR02188 365 SVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGG 443 (625)
T ss_pred EecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeE
Confidence 9999999999999999884 478999999999987655422212234678899999999999999 8999999 99999
Q ss_pred eEEEec--CccccccCCCCC
Q 015325 391 ELSIRG--PTIMKGIFLPHF 408 (409)
Q Consensus 391 ei~v~g--~~v~~gY~~~~~ 408 (409)
||+|+| |+++.|||++++
T Consensus 444 eL~v~~p~p~~~~gy~~~~~ 463 (625)
T TIGR02188 444 YLVIKQPWPGMLRTIYGDHE 463 (625)
T ss_pred EEEEccCCCcccccccCChH
Confidence 999999 689999999874
No 22
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-51 Score=411.58 Aligned_cols=372 Identities=19% Similarity=0.216 Sum_probs=288.2
Q ss_pred CCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCC
Q 015325 30 DLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS 105 (409)
Q Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~ 105 (409)
.|.+ +..+|+...+.++..+. ..+|+++|+++... .+++||+||.++++++|+.|++ +|+++||+|+++++|+
T Consensus 51 ~wf~-~~~~n~~~~~l~~~~~~-~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GDrV~i~~~n~ 127 (647)
T PTZ00237 51 DWFK-GGELNTCYNVLDIHVKN-PLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-LNISKNDNVLIYMANT 127 (647)
T ss_pred hhCC-CCeeeHHHHHHHHhhcc-cCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCC
Confidence 3443 56689988777665421 00289999987421 3589999999999999999999 9999999999999999
Q ss_pred CchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCc---------hHHHHh---hc---C-CeEEEeC-C
Q 015325 106 IEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS---------VVHKLA---KL---K-HRTILID-S 168 (409)
Q Consensus 106 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~---~~---~-~~~~~~~-~ 168 (409)
+++++++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+. .. . ..++... .
T Consensus 128 ~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 207 (647)
T PTZ00237 128 LEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRN 207 (647)
T ss_pred HHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcC
Confidence 9999999999999999999999999999999999999999999752 111111 10 1 1222211 0
Q ss_pred --------------------Ccchhhhccc---CCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHH-HHHHHHh
Q 015325 169 --------------------PEFDSMTMSW---NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNL-TAAVASS 224 (409)
Q Consensus 169 --------------------~~~~~~~~~~---~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l-~~~~~~~ 224 (409)
..|++++... ............++++++|+|||||||.||||+++|++. .......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~ 287 (647)
T PTZ00237 208 DITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYW 287 (647)
T ss_pred CcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHH
Confidence 0122222110 000011123346789999999999999999999999984 4333322
Q ss_pred hccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC--CC----HHHHHHHHHHhcceeEeechHHHHHHHhC
Q 015325 225 FASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FD----LKMMLKAVEEFRVTHAAVTPPIVVAMSKG 298 (409)
Q Consensus 225 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~--~~----~~~~~~~i~~~~~t~l~~~p~~l~~l~~~ 298 (409)
.... .....+++++..|++|+.+...++.++..|+++++.++ +. +..+++.|+++++|++.++|++++.|.+.
T Consensus 288 ~~~~-~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 366 (647)
T PTZ00237 288 RSII-EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKT 366 (647)
T ss_pred HHhc-CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhh
Confidence 3333 46678999999999998766678999999999999864 12 68899999999999999999999999875
Q ss_pred CC-----CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceE
Q 015325 299 GS-----TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEA 373 (409)
Q Consensus 299 ~~-----~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v 373 (409)
.. ....++++||.+++||+++++++.+++++.+ ++++++.||+||+++.++.. ........+++|+|+||+++
T Consensus 367 ~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~-~~~~~~~~~s~G~p~~g~~~ 444 (647)
T PTZ00237 367 DPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYC-YGHINIPYNATGVPSIFIKP 444 (647)
T ss_pred CccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhcc-CCCCCCCCCCCccCcCCceE
Confidence 32 2345688999999999999999999999998 89999999999998654431 12222334789999999999
Q ss_pred EEecCCCCCCCCCCCcceEEEecC---ccccccCCCCC
Q 015325 374 KIVDPETGDSLPPGKEGELSIRGP---TIMKGIFLPHF 408 (409)
Q Consensus 374 ~i~d~~~g~~~~~g~~Gei~v~g~---~v~~gY~~~~~ 408 (409)
+|+| ++|++++.|+.|||+++|| +++.|||+++.
T Consensus 445 ~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~ 481 (647)
T PTZ00237 445 SILS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDE 481 (647)
T ss_pred EEEC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHH
Confidence 9999 7999999999999999986 78999999863
No 23
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=9.1e-51 Score=407.41 Aligned_cols=367 Identities=25% Similarity=0.309 Sum_probs=296.6
Q ss_pred CCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeC------CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCC
Q 015325 31 LPPEDAPISAVDYVSSLRATLPWRDDDTVALINS------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN 104 (409)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~ 104 (409)
+...+-+.++.++|.+.++++ |+++|+++. ...+++||+||.+++.++|+.|++ .|+++||+|+++++|
T Consensus 18 ~~~~~~~~t~~~~l~~~a~~~----p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gi~~gd~V~i~~~n 92 (632)
T PRK07529 18 LAARDLPASTYELLSRAAARH----PDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-LGVGPGDVVAFLLPN 92 (632)
T ss_pred chhhcCCCCHHHHHHHHHHHC----CCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCC
Confidence 333344579999999999998 999999863 125789999999999999999999 999999999999999
Q ss_pred CCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH-----HHHh----hc-CCe-EEEeCCC----
Q 015325 105 SIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA----KL-KHR-TILIDSP---- 169 (409)
Q Consensus 105 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~----~~-~~~-~~~~~~~---- 169 (409)
++++++++|||+++| +++|+++.++.+++.++++.++++++|++.... ..+. .. ..+ ++..+..
T Consensus 93 ~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 171 (632)
T PRK07529 93 LPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLP 171 (632)
T ss_pred CHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccc
Confidence 999999999999999 569999999999999999999999999975431 1111 11 111 2222211
Q ss_pred -------------------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC
Q 015325 170 -------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (409)
Q Consensus 170 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~ 230 (409)
++.+.+...............++++++++|||||||.||+|.+||++++.........+ .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~ 250 (632)
T PRK07529 172 GPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-G 250 (632)
T ss_pred ccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-C
Confidence 12222222111101111234568999999999999999999999999998877777666 5
Q ss_pred CCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecC--C-C---HHHHHHHHHHhcceeEeechHHHHHHHhCCCCCC
Q 015325 231 RVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR--F-D---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG 303 (409)
Q Consensus 231 ~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~--~-~---~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~ 303 (409)
..++|++++..|++|.++. ..++.++..|+++++.+. + + ...+++.++++++|++.++|+++..|++.+.. .
T Consensus 251 ~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~ 329 (632)
T PRK07529 251 LGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-G 329 (632)
T ss_pred CCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-C
Confidence 7899999999999999988 678999999999999853 2 2 36889999999999999999999999987532 3
Q ss_pred CCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEe--cCCCC
Q 015325 304 YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIV--DPETG 381 (409)
Q Consensus 304 ~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~--d~~~g 381 (409)
.++++||.+++||+++++++.++|++.+ ++++++.||+||+++.++.. ........+++|+|+|+++++|+ | ++|
T Consensus 330 ~~~~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~-~~~~~~~~~svG~~~p~~~v~i~~~d-~~g 406 (632)
T PRK07529 330 HDISSLRYALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVN-PPDGERRIGSVGLRLPYQRVRVVILD-DAG 406 (632)
T ss_pred CCccceEEEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccC-CccccccCCCcccccCCceEEEEEcC-CCC
Confidence 4678999999999999999999999998 89999999999998765542 22233467899999999999985 5 566
Q ss_pred ---CCCCCCCcceEEEecCccccccCCCCC
Q 015325 382 ---DSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 382 ---~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+++++|+.|||+|+||+++.||++++.
T Consensus 407 ~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~ 436 (632)
T PRK07529 407 RYLRDCAVDEVGVLCIAGPNVFSGYLEAAH 436 (632)
T ss_pred cccccCCCCCceEEEEECCCccccccCCcc
Confidence 889999999999999999999998763
No 24
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=7.7e-51 Score=410.74 Aligned_cols=362 Identities=23% Similarity=0.252 Sum_probs=283.2
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeC----------CCC-----------ceeeHHHHHHHHHHHHHHhHhccCCCCCC
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLSKND 96 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~~gv~~g~ 96 (409)
.|+.++|.+.++.+ ||++|+... .++ ..+||+|+.++++++|++|.+ +|+++||
T Consensus 58 ~t~~~l~~~~~~~~----pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-lG~~~gd 132 (696)
T PLN02387 58 TTLAALFEQSCKKY----SDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA-LGHNKEE 132 (696)
T ss_pred CCHHHHHHHHHHHC----CCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 68999999999999 999999421 012 238999999999999999999 9999999
Q ss_pred EEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CC-eEEEeCCCc
Q 015325 97 TAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPE 170 (409)
Q Consensus 97 ~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~~~~~~~~ 170 (409)
+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+... .. .++.++...
T Consensus 133 ~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~ 212 (696)
T PLN02387 133 RVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEG 212 (696)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999987766554432 11 233333211
Q ss_pred -----------------chhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCC
Q 015325 171 -----------------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (409)
Q Consensus 171 -----------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 233 (409)
+.++...+... ........++|+++|+|||||||.||||++||++++..+.........+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~ 291 (696)
T PLN02387 213 VDSDSSLSGSSNWTVSSFSEVEKLGKEN-PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK 291 (696)
T ss_pred chhhhhhhccCCcEEEEHHHHHHhhccC-CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC
Confidence 22222211111 111223457899999999999999999999999999888776655435788
Q ss_pred CCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCC--------HHHHHHHHHHhcceeEeechHHHHHHHhCCCCC---
Q 015325 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD--------LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--- 302 (409)
Q Consensus 234 ~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~--- 302 (409)
+|++++.+|++|.+++...+.++..|+++.+..... +..++..++++++|++.++|.+++.+.+....+
T Consensus 292 ~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~ 371 (696)
T PLN02387 292 NDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDA 371 (696)
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhc
Confidence 999999999999999966666778888877653311 234567899999999999999999886531100
Q ss_pred ------------------------------CC-------------CC-CCcceeeecCCCCCHHHHHHHHHhCCCCceec
Q 015325 303 ------------------------------GY-------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (409)
Q Consensus 303 ------------------------------~~-------------~l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 338 (409)
.. .+ ++||.+++||+++++++.+.++..+ ++.+++
T Consensus 372 ~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~ 450 (696)
T PLN02387 372 KGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQ 450 (696)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeE
Confidence 00 01 5899999999999999988888788 899999
Q ss_pred ccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCC-CC--CCCCcceEEEecCccccccCCCCC
Q 015325 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGD-SL--PPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~-~~--~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.||+||+++.++... ......+++|+|+|+++++|+|++++. .+ .++..|||+|+||++|.|||++|+
T Consensus 451 ~YG~TEt~~~~~~~~--~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe 521 (696)
T PLN02387 451 GYGLTETCAGATFSE--WDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQE 521 (696)
T ss_pred eechhhcccceeecC--cccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHH
Confidence 999999987665522 233456899999999999999954443 22 345579999999999999999875
No 25
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-50 Score=393.50 Aligned_cols=351 Identities=17% Similarity=0.238 Sum_probs=297.4
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
|++.+.|.+.+.++ |+++|++++ +.++||.||.++++++|+.|.+ .|. +|++|+|+++|+.++++++|||++
T Consensus 1 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~~-~~~~v~i~~~~~~~~~~~~la~~~ 72 (487)
T PRK07638 1 MGITKEYKKHASLQ----PNKIAIKEN--DRVLTYKDWFESVCKVANWLNE-KES-KNKTIAILLENRIEFLQLFAGAAM 72 (487)
T ss_pred CChHHHHHHHHHhC----CCCeEEecC--CcEeeHHHHHHHHHHHHHHHHH-hCC-CCCEEEEEcCCCHHHHHHHHHHHH
Confidence 56888899998888 999999987 7899999999999999999999 884 799999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (409)
+|++++|+++.++.+++.++++.+++++++++......+......++..+ .+......... .........+++++|
T Consensus 73 ~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~a~i 148 (487)
T PRK07638 73 AGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEID--EWKRMIEKYLP--TYAPIENVQNAPFYM 148 (487)
T ss_pred cCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEeh--hhhhhhhhccc--cccccccCCCCcEEE
Confidence 99999999999999999999999999999999865554443233333222 22222221110 111112234678999
Q ss_pred EcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHH
Q 015325 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (409)
Q Consensus 198 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i 277 (409)
+|||||||.||+|+++|++++..+......+ ...++|+++...|++|..++..++.++..|+++++.+.+++..++..+
T Consensus 149 ~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i 227 (487)
T PRK07638 149 GFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-HMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKL 227 (487)
T ss_pred EeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHH
Confidence 9999999999999999999988888777766 688999999999999998888889999999999999999999999999
Q ss_pred HHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCC
Q 015325 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (409)
Q Consensus 278 ~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 357 (409)
+++++|++.++|+++..|.+... . ..+.+.++++|++++.++.+++.+.||++++++.||+||++..+... ....
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~-~~~~ 302 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALV-DEES 302 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEec-cccc
Confidence 99999999999999999998732 1 34566678899999999999999999999999999999998765542 2233
Q ss_pred CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCC
Q 015325 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 358 ~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~ 407 (409)
.....++|+|+++++++|+| ++|+++++|+.|||+++|+.++.|||+++
T Consensus 303 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~ 351 (487)
T PRK07638 303 ERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGG 351 (487)
T ss_pred CCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCH
Confidence 44567899999999999999 88999999999999999999999999886
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-50 Score=404.30 Aligned_cols=365 Identities=19% Similarity=0.242 Sum_probs=291.4
Q ss_pred CCCCCHHHHHh-hccCCCCCCCCCCcEEEeCC----CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchH
Q 015325 35 DAPISAVDYVS-SLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (409)
Q Consensus 35 ~~~~~~~~~l~-~~~~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~ 109 (409)
+..+|+...+. +.++++ |+++|+++.. +.+++||+||.++++++|+.|++ .|+++||+|+++++|+++++
T Consensus 63 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 137 (637)
T PRK00174 63 DGELNVSYNCLDRHLKTR----GDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-LGVKKGDRVAIYMPMIPEAA 137 (637)
T ss_pred CCEeEHHHHHHHHhhccC----CCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 55577766544 445556 9999999742 23589999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH---------HHHh----hc-CCe-EEEeCCC-----
Q 015325 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA----KL-KHR-TILIDSP----- 169 (409)
Q Consensus 110 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~-~~~-~~~~~~~----- 169 (409)
++++||+++|++++++++.++.+++.+++++++++++|+++... ..+. .. ..+ ++..+..
T Consensus 138 ~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (637)
T PRK00174 138 VAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD 217 (637)
T ss_pred HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC
Confidence 99999999999999999999999999999999999999976532 1111 11 111 2222210
Q ss_pred -------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHH-hhccCCCCCCCCEEEEeC
Q 015325 170 -------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVMLFTM 241 (409)
Q Consensus 170 -------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~d~~l~~~ 241 (409)
.++++...... ........++++++|+|||||||.||||+++|++++..... ....+ ...++|++++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-~~~~~d~~~~~~ 294 (637)
T PRK00174 218 WVEGRDLWWHELVAGASD--ECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF-DYKDGDVYWCTA 294 (637)
T ss_pred cCCCCcccHHHHHhhcCC--CCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-CCCCCcEEEEcC
Confidence 12222221110 11222345688999999999999999999999998755443 33334 577889999999
Q ss_pred chhhHHhH-HHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCC--CCCCCCCcceeee
Q 015325 242 PYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVAC 314 (409)
Q Consensus 242 p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~Lr~v~~ 314 (409)
|++|..+. +.++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+.... ...++++||.+++
T Consensus 295 ~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~ 374 (637)
T PRK00174 295 DVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGS 374 (637)
T ss_pred CchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEE
Confidence 99999887 678999999999999753 4799999999999999999999999999886432 3446789999999
Q ss_pred cCCCCCHHHHHHHHHhCC--CCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceE
Q 015325 315 GAAPLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGEL 392 (409)
Q Consensus 315 ~G~~~~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei 392 (409)
+|+++++++.+++.+.++ ++++++.||+||+++.++..........++++|+|++|++++|+| ++|++++.|+.|||
T Consensus 375 ~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel 453 (637)
T PRK00174 375 VGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNL 453 (637)
T ss_pred eCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEE
Confidence 999999999999999884 378999999999987654322111233567899999999999999 89999999999999
Q ss_pred EEec--CccccccCCCCC
Q 015325 393 SIRG--PTIMKGIFLPHF 408 (409)
Q Consensus 393 ~v~g--~~v~~gY~~~~~ 408 (409)
+|+| |+++.|||++++
T Consensus 454 ~v~g~~p~~~~gy~~~~~ 471 (637)
T PRK00174 454 VIKDPWPGMMRTIYGDHE 471 (637)
T ss_pred EEcCCCCcccccccCCHH
Confidence 9999 699999999873
No 27
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-50 Score=397.10 Aligned_cols=352 Identities=19% Similarity=0.232 Sum_probs=296.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.++++ ||++|++++ ++++||+||.++++++|++|.+ .|+++|++|+++++|+++++++++||++
T Consensus 43 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 115 (537)
T PRK13382 43 MGPTSGFAIAAQRC----PDRPGLIDE--LGTLTWRELDERSDALAAALQA-LPIGEPRVVGIMCRNHRGFVEALLAANR 115 (537)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEeC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEecCcHHHHHHHHHHHH
Confidence 68999999999999 999999987 7799999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc------CCeEEEeCCC----cchhhhcccCCccccccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDSP----EFDSMTMSWNSKHELDRA 187 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 187 (409)
+|++++|+++.++.+++.+++++++++++|++.+....+... ....+..... .++.+..... ....
T Consensus 116 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 191 (537)
T PRK13382 116 IGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHA----GQRP 191 (537)
T ss_pred cCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccC----cCCC
Confidence 999999999999999999999999999999987765444321 1111222111 1222221111 0011
Q ss_pred ccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC
Q 015325 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (409)
Q Consensus 188 ~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~ 267 (409)
...+++.++++|||||||.||||+++|++++.........+ .....++++...|++|.+++..++.++..|+++++...
T Consensus 192 ~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 270 (537)
T PRK13382 192 EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-PWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRR 270 (537)
T ss_pred CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-CCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCC
Confidence 23457889999999999999999999998887777766666 57788999999999999999888999999999999988
Q ss_pred CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccc
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 345 (409)
+++..+++.|+++++|++.++|+++..|++... ....++++||.+++||++++++++++|.+.+ +..+++.||+||+
T Consensus 271 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~ 349 (537)
T PRK13382 271 FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEA 349 (537)
T ss_pred cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeccccccc
Confidence 999999999999999999999999999987643 2234467899999999999999999999999 7789999999999
Q ss_pred cceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccC
Q 015325 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIF 404 (409)
Q Consensus 346 ~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~ 404 (409)
+..++... ......++++|+|+++++++|+| +++++++.|+.|||+++|++++.||+
T Consensus 350 ~~~~~~~~-~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~ 406 (537)
T PRK13382 350 GMIATATP-ADLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYT 406 (537)
T ss_pred CcceecCh-hHhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCcc
Confidence 87655322 12234567899999999999999 78999999999999999999999998
No 28
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-50 Score=411.00 Aligned_cols=350 Identities=19% Similarity=0.211 Sum_probs=290.7
Q ss_pred CCHHHHHhhccCC--CCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 38 ISAVDYVSSLRAT--LPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 38 ~~~~~~l~~~~~~--~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
-|+.++|.+.+.. + ||++|++++ ..+||+||.++++++|+.|.+ .|+++|++|+++++|+++++++++||
T Consensus 4 ~~~~~~~~~~a~~~~~----pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~ 75 (705)
T PRK06060 4 GNLAGLLAEQASEAGW----YDRPAFYAA---DVVTHGQIHDGAARLGEVLRN-RGLSSGDRVLLCLPDSPDLVQLLLAC 75 (705)
T ss_pred cCHHHHHHHHHhhccC----CCceEEEec---CceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3788888887765 5 899999874 479999999999999999999 99999999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEE
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVA 195 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 195 (409)
+++|++++|++|.++.+++.+++++++++++|++.+....+... .+. . ....................+++++
T Consensus 76 ~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~a 148 (705)
T PRK06060 76 LARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS--RVA--E---AAELMSEAARVAPGGYEPMGGDALA 148 (705)
T ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc--ccc--h---hhhhhhhccccCCCCCCCCCCCCeE
Confidence 99999999999999999999999999999999987655433211 111 0 1111111100001111234568899
Q ss_pred EEEcCCCCCCCcchhhhccHHHHHHHHHhh-ccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEec-CCCHHH
Q 015325 196 AIMYSSGTTGRVKGVMLTHRNLTAAVASSF-ASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKM 272 (409)
Q Consensus 196 ~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~ 272 (409)
+++|||||||.||||+++|+++...+.... ..+ .+...|++++..|++|.+++ ..++.++..|+++++.+ .+++..
T Consensus 149 ~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~ 227 (705)
T PRK06060 149 YATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-RLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEA 227 (705)
T ss_pred EEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-CCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHH
Confidence 999999999999999999999988776554 334 57888999999999999887 67888999999999986 478899
Q ss_pred HHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceeccc
Q 015325 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (409)
Q Consensus 273 ~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (409)
+...++++++|+++++|+++..+.+... ...+++||.+++||+++++++.++|.+.|+++++++.||+||++..+...
T Consensus 228 ~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 305 (705)
T PRK06060 228 AAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSN 305 (705)
T ss_pred HHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEec
Confidence 9999999999999999999999987643 23568999999999999999999999999889999999999997654431
Q ss_pred CCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 353 ~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.......+++|+|+++++++|+| ++|+++++|+.|||+|+|++++.||||+++
T Consensus 306 --~~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~ 358 (705)
T PRK06060 306 --RVDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPD 358 (705)
T ss_pred --cCCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCc
Confidence 12233467899999999999999 789999999999999999999999999875
No 29
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-50 Score=394.06 Aligned_cols=354 Identities=24% Similarity=0.338 Sum_probs=300.9
Q ss_pred CHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHh
Q 015325 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (409)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~ 118 (409)
.+.+.|.+.++.+ ||++|++++ ++.+||.||.++++++|+.|++..|+++|++|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 3 GIAYWIEKRAYLH----PDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred cHHHHHHHHHHHC----CCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 5778889999888 999999987 8999999999999999999975379999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-----CeEEEeCCCcchhhhcccCCcccccccccCCCC
Q 015325 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (409)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
|++++|+++..+.+++..+++.+++++++++++....+.+.. ..++.+. ++.+..... ........+++
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~ 150 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT--SLKEIEDRK----IDNFVEKNESA 150 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec--chHhhhccC----CCCCCCCCCCC
Confidence 999999999999999999999999999999987665544321 1222222 222222211 11122345688
Q ss_pred EEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHH
Q 015325 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKM 272 (409)
Q Consensus 194 ~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~ 272 (409)
+++++|||||||.||+|.++|.++..........+ ....+|++++..|++|.+++ ..++.++..|+++++.+.+++..
T Consensus 151 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 229 (496)
T PRK06839 151 SFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229 (496)
T ss_pred cEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHH
Confidence 99999999999999999999999877666555556 57889999999999999998 56788999999999998899999
Q ss_pred HHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceeccc
Q 015325 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (409)
Q Consensus 273 ~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (409)
+++.++++++|.+.++|+++..+.........+++++|.+++||+++++++.+.|++. ++++++.||+||++..++..
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~ 307 (496)
T PRK06839 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFML 307 (496)
T ss_pred HHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEec
Confidence 9999999999999999999999998876666678899999999999999999999986 89999999999998755443
Q ss_pred CCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 353 ~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.........+++|+|+++++++|+| ++++.++.|+.|||+|+|++++.|||+++.
T Consensus 308 ~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 362 (496)
T PRK06839 308 SEEDARRKVGSIGKPVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEYWNRPD 362 (496)
T ss_pred ccccccccCCCCcccCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhhcCChH
Confidence 3323335568899999999999999 778889999999999999999999998864
No 30
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.4e-50 Score=394.09 Aligned_cols=359 Identities=25% Similarity=0.343 Sum_probs=306.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.+..+ |+++|++++ ++++||+||.+++.++|+.|++ .|+++||+|+++++|+.+++++++||++
T Consensus 5 ~~i~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~g~~V~l~~~~~~~~~~~~la~~~ 77 (513)
T PRK07656 5 MTLPELLARAARRF----GDKEAYVFG--DQRLTYAELNARVRRAAAALAA-LGIGKGDRVAIWAPNSPHWVIAALGALK 77 (513)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEeC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 67999999999888 999999998 8899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCe-EEEeCC----------CcchhhhcccCCc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS----------PEFDSMTMSWNSK 181 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~----------~~~~~~~~~~~~~ 181 (409)
+|++++++++..+.+++.+++++++++++++++......... ... ++.... ..|.++......
T Consensus 78 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 78 AGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCC-
Confidence 999999999999999999999999999999988765544321 111 111111 122333222111
Q ss_pred ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCC
Q 015325 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (409)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~ 260 (409)
........++++++++|||||||.||+|.++|+++...+......+ ...+.+++++..|++|.+++ ..++.++..|+
T Consensus 157 -~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (513)
T PRK07656 157 -AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGA 234 (513)
T ss_pred -CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-CCCCCCeEEEccchHHHHHHHHHHHHHHHcCc
Confidence 1122345678899999999999999999999999998887777777 68899999999999999998 66899999999
Q ss_pred eEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCC-ceecc
Q 015325 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV-VLVQA 339 (409)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~-~i~~~ 339 (409)
++++.+.+++..+++.|+++++|++.++|+++..+.+........+++||.+++||+++++++.++|++.+ +. .+++.
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~ 313 (513)
T PRK07656 235 TILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESEL-GVDIVLTG 313 (513)
T ss_pred eEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHc-CCCceEeE
Confidence 99998888999999999999999999999999999998776666789999999999999999999999999 66 89999
Q ss_pred cCcccccceecccCCCCC-CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 340 YGLTESTAGVFRTVGPDE-CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 340 yG~tE~~~~~~~~~~~~~-~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
||+||++++++....... ....+++|.|+++++++|+| +++++++.|+.|||+++|++++.||++++.
T Consensus 314 YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 382 (513)
T PRK07656 314 YGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPE 382 (513)
T ss_pred EccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHH
Confidence 999999876665322111 12267899999999999999 789999999999999999999999998753
No 31
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-49 Score=390.04 Aligned_cols=359 Identities=25% Similarity=0.334 Sum_probs=302.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
+|+.+.+...++.+ |+++|++++ ++.+||.||.+++.++|.+|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 2 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (497)
T PRK06145 2 FNLSASIAFHARRT----PDRAALVYR--DQEISYAEFHQRILQAAGMLHA-RGIGQGDVVALLMKNSAAFLELAFAASY 74 (497)
T ss_pred ccHHHHHHHHHHHC----CCceEEEEC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 67889999999888 999999998 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCc---chhhhcccCCcccccccccCCCCE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE---FDSMTMSWNSKHELDRAKVCQSDV 194 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 194 (409)
+|++++|+++..+.+++.++++.+++++++++.+....... ....+.++... +..+..... . ........++++
T Consensus 75 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ 151 (497)
T PRK06145 75 LGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-ETPKIVIDAAAQADSRRLAQGGL-E-IPPQAAVAPTDL 151 (497)
T ss_pred cCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-ccceEEecCcccchhHHHhccCC-C-CCCCCCCCccce
Confidence 99999999999999999999999999999998766543321 11222222111 111111000 0 111123456899
Q ss_pred EEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHH
Q 015325 195 AAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMM 273 (409)
Q Consensus 195 a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~ 273 (409)
++++|||||||.||+|.+||+++..........+ +...+++++...|++|.+++ ...+.++..|+++++.+.+++..+
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 230 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAV 230 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHH
Confidence 9999999999999999999999987666555556 68899999999999999988 566888999999999998999999
Q ss_pred HHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccC
Q 015325 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (409)
Q Consensus 274 ~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (409)
++.++++++|.+.++|+++..++.........+++||.+++||+++++++.++|++.|++.++++.||+||+++..+...
T Consensus 231 ~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 310 (497)
T PRK06145 231 LAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLME 310 (497)
T ss_pred HHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceecc
Confidence 99999999999999999999999876655667789999999999999999999999998899999999999987555433
Q ss_pred CCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 354 ~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
........+++|+|+++++++++| ++++++++|+.|||+++|++++.|||+++.
T Consensus 311 ~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~ 364 (497)
T PRK06145 311 AGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPE 364 (497)
T ss_pred CccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChH
Confidence 222334567899999999999999 789999999999999999999999998763
No 32
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-49 Score=388.40 Aligned_cols=350 Identities=23% Similarity=0.283 Sum_probs=298.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
+|+.++|.+.+..+ ||++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+.+++++++|+++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (483)
T PRK03640 2 ETMPNWLKQRAFLT----PDRTAIEFE--EKKVTFMELHEAVVSVAGKLAA-LGVKKGDRVALLMKNGMEMILVIHALQQ 74 (483)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeC--CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999999 999999988 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (409)
+|++++++++..+.+++..++++++++++++++.......... ...++++....... ........+++++++
T Consensus 75 ~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i 146 (483)
T PRK03640 75 LGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI-------SVKFAELMNGPKEE-AEIQEEFDLDEVATI 146 (483)
T ss_pred CCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc-------cccHHHHhhccccc-CCCCCCCCCCCeEEE
Confidence 9999999999999999999999999999999876554433211 01133322221111 112223456899999
Q ss_pred EcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHH
Q 015325 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (409)
Q Consensus 198 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i 277 (409)
+|||||||.||+|.+||+++...+......+ +.+++|++++.+|++|.+++..++.++..|+++++.+..++..+++.+
T Consensus 147 ~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 225 (483)
T PRK03640 147 MYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLL 225 (483)
T ss_pred EeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHH
Confidence 9999999999999999999988776666666 688999999999999999997789999999999999999999999999
Q ss_pred HHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCC
Q 015325 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (409)
Q Consensus 278 ~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 357 (409)
+++++|++.++|+++..|....... ....+||.+++||+++++.+++.+++. ++++++.||+||++..++.......
T Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~ 302 (483)
T PRK03640 226 QTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDA 302 (483)
T ss_pred HHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccc
Confidence 9999999999999999998764332 234689999999999999999998874 8999999999998765444333333
Q ss_pred CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 358 ~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
....+++|+|+++++++|+| + +++++.|+.|||+++||+++.||++++.
T Consensus 303 ~~~~~~vG~p~~~~~~~i~~-~-~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 351 (483)
T PRK03640 303 LTKLGSAGKPLFPCELKIEK-D-GVVVPPFEEGEIVVKGPNVTKGYLNRED 351 (483)
T ss_pred cccCCCcccccCCcEEEEec-C-CCcCCCCCceEEEEECcchhhhhcCCHH
Confidence 45678999999999999998 4 4899999999999999999999998863
No 33
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-49 Score=393.65 Aligned_cols=361 Identities=24% Similarity=0.394 Sum_probs=293.4
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
..|+.+.|...++++ |+++|++++ ++.+||+||.++++++|+.|.+..|+++||+|+++++|++++++++|||+
T Consensus 23 ~~~~~~~l~~~a~~~----p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~ 96 (562)
T PRK05677 23 YPNIQAVLKQSCQRF----ADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAM 96 (562)
T ss_pred cCcHHHHHHHHHHhC----CCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 358999999999888 999999987 78999999999999999999862499999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhh----cCCeEEEeCC-Cc---------------------
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHRTILIDS-PE--------------------- 170 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~~~~~~-~~--------------------- 170 (409)
++|++++|+++..+.+++.+++++++++++|++.+....+.+ ...+.+.... .+
T Consensus 97 ~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK05677 97 RAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMV 176 (562)
T ss_pred HcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccc
Confidence 999999999999999999999999999999998765443321 1222221110 00
Q ss_pred ----------chhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC-CCC-CCCEEE
Q 015325 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRV-SPAVML 238 (409)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~-~~d~~l 238 (409)
+.+........ ........++++++++|||||||.||+|+++|+++...+......+. ... ..++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 177 PAYHLPQAVKFNDALAKGAGQ-PVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred cccCCcccccHHHHHhcCCCC-CCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 01111111000 11122345689999999999999999999999999876655544331 122 457889
Q ss_pred EeCchhhHHhH-HHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecC
Q 015325 239 FTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (409)
Q Consensus 239 ~~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G 316 (409)
+.+|++|.+++ ..++.++..|++.++.+ ..++..+++.|+++++|.+.++|+++..+..........+++||.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 99999999998 67788888898877765 46899999999999999999999999999886554455678999999999
Q ss_pred CCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEec
Q 015325 317 APLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (409)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g 396 (409)
+++++++.++|++.+ ++++++.||+||++..++.. ......++++|+|+++++++|+| +++++++.|+.|||+++|
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~--~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVN--PSQAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeec--CccCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEec
Confidence 999999999999988 89999999999998766542 22334567899999999999999 789999999999999999
Q ss_pred CccccccCCCCC
Q 015325 397 PTIMKGIFLPHF 408 (409)
Q Consensus 397 ~~v~~gY~~~~~ 408 (409)
+.++.|||+++.
T Consensus 412 ~~~~~gY~~~~~ 423 (562)
T PRK05677 412 PQVMKGYWQRPE 423 (562)
T ss_pred CccchhhcCCch
Confidence 999999999874
No 34
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=5.9e-50 Score=396.99 Aligned_cols=357 Identities=21% Similarity=0.310 Sum_probs=287.5
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCC--------ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTG--------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~ 109 (409)
+|+.+.|.+.++++ |+++|+++.+.+ +++||+||.++++++|++|.+ .|+++||+|+++++|+++++
T Consensus 6 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-~g~~~gd~V~~~~~n~~~~~ 80 (552)
T PRK09274 6 ANIARHLPRAAQER----PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-AGIGRGMRAVLMVTPSLEFF 80 (552)
T ss_pred hhHHHHHHHHHHhC----CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCcHHHH
Confidence 78899999999888 999999986322 289999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCc--hHHHHhhc---CC-eEEEeCC------Ccchhhhcc
Q 015325 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS--VVHKLAKL---KH-RTILIDS------PEFDSMTMS 177 (409)
Q Consensus 110 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~--~~~~~~~~---~~-~~~~~~~------~~~~~~~~~ 177 (409)
++++||+++|++++|+++.++.+++.+++++++++++|++++ ....+... .. .++.++. ..+.++...
T Consensus 81 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 160 (552)
T PRK09274 81 ALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRD 160 (552)
T ss_pred HHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhccc
Confidence 999999999999999999999999999999999999998752 22222111 01 1222211 122222211
Q ss_pred cCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHH
Q 015325 178 WNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAA 257 (409)
Q Consensus 178 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~ 257 (409)
.... ........++++++++|||||||.||+|.+||+++...+......+ ++.+.++.++..|++|.+++ .
T Consensus 161 ~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~pl~~~~~~-------~ 231 (552)
T PRK09274 161 GAAA-PFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-GIEPGEIDLPTFPLFALFGP-------A 231 (552)
T ss_pred Cccc-cCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-CCCCCceeeeccCHHHhhhh-------h
Confidence 1100 1122334568999999999999999999999999998888777777 68889999999999876543 4
Q ss_pred hCCeEEEec-------CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHh
Q 015325 258 LMETAVVMQ-------RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASK 330 (409)
Q Consensus 258 ~G~~~v~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~ 330 (409)
.|+++++.+ .+++..+++.|+++++|+++++|+++..|.+.......++++||.+++||+++++++.++|++.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~ 311 (552)
T PRK09274 232 LGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAM 311 (552)
T ss_pred hCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHH
Confidence 588887764 4689999999999999999999999999998765556678999999999999999999999999
Q ss_pred CC-CCceecccCcccccceecccCCC------C--CCCCCCccccccCCceEEEecCC--------CCCCCCCCCcceEE
Q 015325 331 FP-KVVLVQAYGLTESTAGVFRTVGP------D--ECRRWGSTGRLSAGLEAKIVDPE--------TGDSLPPGKEGELS 393 (409)
Q Consensus 331 ~~-~~~i~~~yG~tE~~~~~~~~~~~------~--~~~~~~s~G~p~~~~~v~i~d~~--------~g~~~~~g~~Gei~ 393 (409)
|+ ++++++.||+||+++.++..... . ......++|+|+|+++++|+|++ ++++++.|+.|||+
T Consensus 312 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~ 391 (552)
T PRK09274 312 LPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIV 391 (552)
T ss_pred cCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEE
Confidence 96 48999999999998655432111 0 11122478999999999999952 57889999999999
Q ss_pred EecCccccccCCCCC
Q 015325 394 IRGPTIMKGIFLPHF 408 (409)
Q Consensus 394 v~g~~v~~gY~~~~~ 408 (409)
|+|++++.|||++|.
T Consensus 392 v~g~~~~~GY~~~~~ 406 (552)
T PRK09274 392 VAGPMVTRSYYNRPE 406 (552)
T ss_pred EecCcccccccCChH
Confidence 999999999999863
No 35
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.3e-49 Score=398.30 Aligned_cols=356 Identities=21% Similarity=0.246 Sum_probs=282.8
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCC---CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSV---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~ 113 (409)
+.++.+.|.+.+.++ |+++|+++.+ ..+++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|
T Consensus 38 ~~~l~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~Gv~~gd~Vai~~~n~~e~~~~~l 112 (614)
T PRK08180 38 PRRLTDRLVHWAQEA----PDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-RGLSAERPLMILSGNSIEHALLAL 112 (614)
T ss_pred CccHHHHHHHHHHHC----CCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHH
Confidence 378999999999988 9999998742 12689999999999999999999 999999999999999999999999
Q ss_pred HHHHhCCeEccCCCCCC-----HHHHHHHHhhcCCeEEEEcCch--HHHHhh---cCCeEEEeCC-------Ccchhhhc
Q 015325 114 SLLSLGVIISPANPVNT-----ESEISRQIQLSNPVIAFATSSV--VHKLAK---LKHRTILIDS-------PEFDSMTM 176 (409)
Q Consensus 114 A~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~--~~~~~~---~~~~~~~~~~-------~~~~~~~~ 176 (409)
||+++|++++|+++.++ .+++.+++++++++++|+++.. ...+.. ....++..+. ..+.++..
T Consensus 113 A~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 192 (614)
T PRK08180 113 AAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALLA 192 (614)
T ss_pred HHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHhc
Confidence 99999999999999988 7999999999999999998642 222221 1223333221 12333332
Q ss_pred ccCCcc-cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCC--CCCEEEEeCchhhHHhH-HHH
Q 015325 177 SWNSKH-ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV--SPAVMLFTMPYFHIYGL-FFC 252 (409)
Q Consensus 177 ~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~-~~~ 252 (409)
...... ........++++++|+|||||||.||||++||+++...+......+ ... ..+++++.+|++|.+++ ..+
T Consensus 193 ~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~lPl~h~~g~~~~~ 271 (614)
T PRK08180 193 TPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF-PFLAEEPPVLVDWLPWNHTFGGNHNL 271 (614)
T ss_pred cccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc-cccCCCCcEEEEecchHHHhhHHHHH
Confidence 211000 0111234568999999999999999999999999998887766655 332 56899999999999998 677
Q ss_pred HHHHHhCCeEEEecC-CCH---HHHHHHHHHhcceeEeechHHHHHHHhCCC----CCCCCCCCcceeeecCCCCCHHHH
Q 015325 253 FRAAALMETAVVMQR-FDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TDGYDLSSLETVACGAAPLGKDTI 324 (409)
Q Consensus 253 ~~~l~~G~~~v~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~~~~l~~Lr~v~~~G~~~~~~~~ 324 (409)
+.++..|+++++.+. +++ ..+++.++++++|+++++|.++..|++... .....+++||.+++||+++++++.
T Consensus 272 ~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~ 351 (614)
T PRK08180 272 GIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVW 351 (614)
T ss_pred HHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHH
Confidence 889999999999763 443 467888999999999999999998886432 123346899999999999999999
Q ss_pred HHHHHh----C-CCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCcc
Q 015325 325 MAFASK----F-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (409)
Q Consensus 325 ~~~~~~----~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v 399 (409)
++|++. + .++++++.||+||++..++... .....++++|+|++|++++|+| + |..|||+|+|+++
T Consensus 352 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~--~~~~~~~svG~p~pg~~v~i~d-~-------~~~GEi~vrg~~v 421 (614)
T PRK08180 352 DRLDRVAEATCGERIRMMTGLGMTETAPSATFTT--GPLSRAGNIGLPAPGCEVKLVP-V-------GGKLEVRVKGPNV 421 (614)
T ss_pred HHHHHHHHhhcCCCceeeeeecccccCCceEecc--cccCCCCcccCccCCcEEEEec-C-------CCCcEEEEecCcc
Confidence 999875 3 2478999999999986665422 2234678999999999999998 3 4469999999999
Q ss_pred ccccCCCCC
Q 015325 400 MKGIFLPHF 408 (409)
Q Consensus 400 ~~gY~~~~~ 408 (409)
+.|||++|.
T Consensus 422 ~~GY~~~p~ 430 (614)
T PRK08180 422 TPGYWRAPE 430 (614)
T ss_pred chhhcCChh
Confidence 999999864
No 36
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-49 Score=394.73 Aligned_cols=361 Identities=22% Similarity=0.311 Sum_probs=296.5
Q ss_pred CCCHHHHHhhcc-C-CCCCCCCCCcEEEeCC--CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHH
Q 015325 37 PISAVDYVSSLR-A-TLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (409)
Q Consensus 37 ~~~~~~~l~~~~-~-~~~~~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~ 112 (409)
.+|+...+.++. . .. |+++|+++.+ ..+++||+||.++++++|++|.+ .|+++||+|+++++|++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~ 115 (570)
T PRK04319 41 KVNIAYEAIDRHADGGR----KDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-LGVEKGDRVFIFMPRIPELYFAL 115 (570)
T ss_pred ceeHHHHHHHHhhccCC----CCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHH
Confidence 478886544443 3 34 8999998742 24689999999999999999999 99999999999999999999999
Q ss_pred HHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhh--c-CC-eEEEeCCC--------cchhhhcccCC
Q 015325 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK--L-KH-RTILIDSP--------EFDSMTMSWNS 180 (409)
Q Consensus 113 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~-~~-~~~~~~~~--------~~~~~~~~~~~ 180 (409)
+||+++|++++|+++.++.+++.++++++++++++++......... . .. .++.++.. ++.++......
T Consensus 116 la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (570)
T PRK04319 116 LGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASD 195 (570)
T ss_pred HHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCC
Confidence 9999999999999999999999999999999999998765443221 1 11 12222211 12222222111
Q ss_pred cccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhC
Q 015325 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALM 259 (409)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G 259 (409)
........++++++++|||||||.||+|+++|++++.........+ .+.++|++++..|++|.++. ..++.++..|
T Consensus 196 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 272 (570)
T PRK04319 196 --EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-DLHEDDVYWCTADPGWVTGTSYGIFAPWLNG 272 (570)
T ss_pred --cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-CCCCCceEEecCChHHhhCchHHHHHHHhcC
Confidence 1122234568899999999999999999999999988877777766 68889999999999999887 7789999999
Q ss_pred CeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCce
Q 015325 260 ETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (409)
Q Consensus 260 ~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i 336 (409)
+++++.. .+++..+++.|+++++|++.++|++++.|.+... ....++++||.+++||+++++++.+++++.+ +.++
T Consensus 273 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i 351 (570)
T PRK04319 273 ATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPI 351 (570)
T ss_pred ceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCe
Confidence 9999875 5899999999999999999999999999987643 2345678999999999999999999999988 8999
Q ss_pred ecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEec--CccccccCCCCC
Q 015325 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG--PTIMKGIFLPHF 408 (409)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g--~~v~~gY~~~~~ 408 (409)
++.||+||+++.++.. .......++++|+|+||++++|+| ++|+++++|+.|||+++| ++++.||||++.
T Consensus 352 ~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~ 423 (570)
T PRK04319 352 HDNWWMTETGGIMIAN-YPAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPE 423 (570)
T ss_pred EeceeecccCCEEEec-CCCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHH
Confidence 9999999998765432 222234568999999999999999 889999999999999997 899999999864
No 37
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=6.8e-50 Score=378.39 Aligned_cols=365 Identities=23% Similarity=0.328 Sum_probs=298.9
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCC----CC--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCch
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSV----TG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~----~~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~ 108 (409)
+...|+.+.+...+..+ |+.+++-... .+ +.+||.|.++++.+++..|++ +|+++++.|+|+..|++||
T Consensus 72 ~~~~T~~~~f~~~~~~~----~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-lG~~~~~~VGIy~~N~pEW 146 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKS----GNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-LGVKEDSKVGIYAFNRPEW 146 (691)
T ss_pred CCcccHHHHhhcchhcc----CCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCceEEEeccCChhh
Confidence 56699999999999999 9999996542 12 689999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC-chHHHHhhc-------CCe-EEEeCCC----------
Q 015325 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS-SVVHKLAKL-------KHR-TILIDSP---------- 169 (409)
Q Consensus 109 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~-~~~~~~~~~-------~~~-~~~~~~~---------- 169 (409)
+++.+||...|++.|||...++++.+.+|++++...++|++. +....+.+. .++ ++.++..
T Consensus 147 iis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~ 226 (691)
T KOG1256|consen 147 IISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAEN 226 (691)
T ss_pred HHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhc
Confidence 999999999999999999999999999999999999999994 444433321 122 2333322
Q ss_pred ------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHh---hccC--CCCCCCCEEE
Q 015325 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS---FASS--PKRVSPAVML 238 (409)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~---~~~~--~~~~~~d~~l 238 (409)
+|+++.+.+............++|.+.|+|||||||.||||++||+|+++.+... .... ......|+.+
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 3677777665332222246788999999999999999999999999999865432 1111 1233479999
Q ss_pred EeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCC----CC------------
Q 015325 239 FTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TD------------ 302 (409)
Q Consensus 239 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----~~------------ 302 (409)
+.+|++|++....-...+..|+.+.+.++ |+..+...|+..+||.+.++|-+|+++-.... ..
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 99999999999666667799999999985 89999999999999999999998876543211 00
Q ss_pred ----------CCC-----C--------------CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccC
Q 015325 303 ----------GYD-----L--------------SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (409)
Q Consensus 303 ----------~~~-----l--------------~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (409)
... + .++|.+++|++|+++++.+.++..+ +++|+++||+||+++.++...
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~ 464 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTL 464 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEecc
Confidence 000 0 4789999999999999999999998 999999999999996555532
Q ss_pred CCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 354 ~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
. .+...+++|.|+|+++++++|+++-+.-+.|..|||+|||++||+|||++|.
T Consensus 465 ~--~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~ 517 (691)
T KOG1256|consen 465 P--GDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPE 517 (691)
T ss_pred C--CCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChH
Confidence 2 2337899999999999999998888888888999999999999999999986
No 38
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-49 Score=389.36 Aligned_cols=360 Identities=24% Similarity=0.340 Sum_probs=303.9
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
.+|+.+.+...+..+ |+++|+++. ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++||+
T Consensus 16 ~~n~~~~~~~~a~~~----~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~~a~~ 88 (542)
T PRK07786 16 RQNWVNQLARHALMQ----PDAPALRFL--GNTTTWRELDDRVAALAGALSR-RGVGFGDRVLILMLNRTEFVESVLAAN 88 (542)
T ss_pred ccCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 389999999999988 999999988 7899999999999999999999 999999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCe-EEEeCC------CcchhhhcccCCcccc
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS------PEFDSMTMSWNSKHEL 184 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~------~~~~~~~~~~~~~~~~ 184 (409)
++|++++|+++..+.+++.++++++++++++++......+... ... ++..+. ..++++...... ..
T Consensus 89 ~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 166 (542)
T PRK07786 89 MLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGP--AH 166 (542)
T ss_pred HcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCC--CC
Confidence 9999999999999999999999999999999998766544321 111 222211 123333222111 11
Q ss_pred cccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCC-CCCCEEEEeCchhhHHhHHHHHHHHHhCCeEE
Q 015325 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKR-VSPAVMLFTMPYFHIYGLFFCFRAAALMETAV 263 (409)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~-~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v 263 (409)
.......+++++++|||||||.||+|.+||+++...+......+ +. ...+++++..|++|.+|+..++.++..|++++
T Consensus 167 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v 245 (542)
T PRK07786 167 APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-GADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTV 245 (542)
T ss_pred CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-CCCCCCceEEEecchHHHHHHHHHHHHHHccCEEE
Confidence 22234557899999999999999999999999998887777666 34 67899999999999999988999999999999
Q ss_pred Eec--CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccC
Q 015325 264 VMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (409)
Q Consensus 264 ~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 341 (409)
+.+ .+++..+++.++++++|.+.++|+++..+.......... .+||.+++||+++++++++++++.|++.++++.||
T Consensus 246 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG 324 (542)
T PRK07786 246 IYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFG 324 (542)
T ss_pred EccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeec
Confidence 875 579999999999999999999999999999875543333 36999999999999999999999999999999999
Q ss_pred cccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+||++...+...........+++|+|++++.++|+| ++++++++|+.|||+++|+.++.||++++.
T Consensus 325 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 390 (542)
T PRK07786 325 QTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPE 390 (542)
T ss_pred ccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHH
Confidence 999987655433333334568899999999999999 889999999999999999999999998863
No 39
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.8e-49 Score=388.25 Aligned_cols=355 Identities=25% Similarity=0.323 Sum_probs=300.2
Q ss_pred HHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhC
Q 015325 40 AVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (409)
Q Consensus 40 ~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G 119 (409)
+.+.|...+.++ |+++|+.+. ++++||+||.+++.++|+.|++ .|+++|++|+++++|+.+++++++||+++|
T Consensus 2 ~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 2 LHHLLEDAAARL----PDATALVHH--DRTLTYAALSERVLALASGLRG-LGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 567787888878 999999987 7899999999999999999999 999999999999999999999999999999
Q ss_pred CeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC------CeEEEeCCC-----------cchhhhcccCCcc
Q 015325 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK------HRTILIDSP-----------EFDSMTMSWNSKH 182 (409)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------~~~~~~~~~-----------~~~~~~~~~~~~~ 182 (409)
++++|+++..+.+++..+++++++++++++.+....+.... ..++.++.. .|+++.....
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 151 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGD--- 151 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcccc---
Confidence 99999999999999999999999999999876654433211 122223321 2333222111
Q ss_pred cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeE
Q 015325 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (409)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~ 262 (409)
.........+++++++|||||||.||+|.+||+++...+......+ ....+|++++.+|++|.+++..++.++..|+++
T Consensus 152 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~ 230 (515)
T TIGR03098 152 ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATV 230 (515)
T ss_pred ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-CCCcccEEEEECchhhHhHHHHHHHHHHcCCEE
Confidence 1112233457899999999999999999999999998888777766 678899999999999999998889999999999
Q ss_pred EEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCc
Q 015325 263 VVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (409)
Q Consensus 263 v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (409)
++.+.++++.+++.++++++|++.++|+++..|.+... ....++++|.++++|+++++++.+++++.+++..+++.||+
T Consensus 231 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~ 309 (515)
T TIGR03098 231 VLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGL 309 (515)
T ss_pred EEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecc
Confidence 99988999999999999999999999999999987532 22356889999999999999999999999988999999999
Q ss_pred ccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
||++..... ........++++|+|+++++++|+| ++|++++.|+.|||+++|+.++.|||+++.
T Consensus 310 tE~~~~~~~-~~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~ 373 (515)
T TIGR03098 310 TEAFRSTYL-PPEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPE 373 (515)
T ss_pred ccccceEec-ccccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCch
Confidence 998754433 2222345678999999999999999 789999999999999999999999998763
No 40
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-50 Score=405.13 Aligned_cols=360 Identities=21% Similarity=0.238 Sum_probs=281.0
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCC-------------------------CCceeeHHHHHHHHHHHHHHhHhccC
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSV-------------------------TGLRVSFSEFTRRTNSLASYLQNVTR 91 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~~g 91 (409)
..|+.+.|...++++ |+++|+.... ..+++||+||.++++++|+.|++ +|
T Consensus 68 ~~t~~~~~~~~~~~~----p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~-~G 142 (700)
T PTZ00216 68 GPNFLQRLERICKER----GDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE-LG 142 (700)
T ss_pred CCCHHHHHHHHHHhC----CCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH-hC
Confidence 368999999999999 9999998731 24789999999999999999999 99
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhh------c-CCeEE
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L-KHRTI 164 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------~-~~~~~ 164 (409)
+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++......+.. . ...++
T Consensus 143 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii 222 (700)
T PTZ00216 143 LTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTII 222 (700)
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEE
Confidence 9999999999999999999999999999999999999999999999999999999998765443321 1 12344
Q ss_pred EeCCC------------cchhhhcccC--CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--
Q 015325 165 LIDSP------------EFDSMTMSWN--SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-- 228 (409)
Q Consensus 165 ~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-- 228 (409)
.++.. .|+++...+. ...........++++++|+|||||||.||||++||+++++.+......+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~ 302 (700)
T PTZ00216 223 YLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLND 302 (700)
T ss_pred EECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhccc
Confidence 43321 1333322221 0001112234678999999999999999999999999998877665433
Q ss_pred --CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHH-------HHHHhcceeEeechHHHHHHHhCC
Q 015325 229 --PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLK-------AVEEFRVTHAAVTPPIVVAMSKGG 299 (409)
Q Consensus 229 --~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~l~~l~~~~ 299 (409)
....+.|++++.+|++|.++.......+..|+++.+. ++..+.+ .++++++|++.++|.+++.+.+..
T Consensus 303 ~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~ 379 (700)
T PTZ00216 303 LIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAV 379 (700)
T ss_pred ccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHH
Confidence 1236789999999999999985556667788877663 4555554 688999999999999998876421
Q ss_pred CC-------------------------CCCC---------------C-CCcceeeecCCCCCHHHHHHHHHhCCCCceec
Q 015325 300 ST-------------------------DGYD---------------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (409)
Q Consensus 300 ~~-------------------------~~~~---------------l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 338 (409)
.. .... + ++||.+++||+++++++.++++..+ + ++++
T Consensus 380 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~ 457 (700)
T PTZ00216 380 EAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQ 457 (700)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhh
Confidence 00 0000 1 5799999999999999998888777 6 9999
Q ss_pred ccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCC-CCCCCCCCcceEEEecCccccccCCCCC
Q 015325 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPET-GDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~-g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.||+||+++..+.. .......+++|+|++|++++|+|.+. +...+++..|||+|+||+++.|||++|.
T Consensus 458 ~YG~TEt~~~~~~~--~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe 526 (700)
T PTZ00216 458 GWGLTETVCCGGIQ--RTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEE 526 (700)
T ss_pred ccCccccccccccc--CCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChh
Confidence 99999997665542 22344578999999999999999432 2334567789999999999999999875
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-49 Score=396.07 Aligned_cols=366 Identities=18% Similarity=0.244 Sum_probs=288.6
Q ss_pred CCCCCHHHHHhh-ccCCCCCCCCCCcEEEeC----CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchH
Q 015325 35 DAPISAVDYVSS-LRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (409)
Q Consensus 35 ~~~~~~~~~l~~-~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~ 109 (409)
+..+|++..+.+ .+..+ |+++|+++. +..+++||+||.++++++|+.|++ .|+++||+|+++++|+++++
T Consensus 49 ~~~~n~~~~~l~~~~~~~----p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 123 (629)
T PRK10524 49 GGRTNLCHNAVDRHLAKR----PEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-LGVQRGDRVLIYMPMIAEAA 123 (629)
T ss_pred CcEeeHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHH
Confidence 455888666554 44555 999999863 124689999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH---------HHHh---h----cCCeEEEeCCC----
Q 015325 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA---K----LKHRTILIDSP---- 169 (409)
Q Consensus 110 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~---~----~~~~~~~~~~~---- 169 (409)
++++||+++|++++|+++.++.+++.+++++++++++|+++... +.+. . ....++..+..
T Consensus 124 ~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 203 (629)
T PRK10524 124 FAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM 203 (629)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 99999999999999999999999999999999999999976321 1111 1 11123333211
Q ss_pred --------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHH-hhccCCCCCCCCEEEEe
Q 015325 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVMLFT 240 (409)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~d~~l~~ 240 (409)
.+.++....... ........++++++++|||||||.||||+++|++++..... ....+ +..++|++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~ 281 (629)
T PRK10524 204 ARVAGRDVDYATLRAQHLGA-RVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF-GGKAGETFFCA 281 (629)
T ss_pred CcccCCcccHHHHHhcCCCC-CCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc-CCCCCCEEEEc
Confidence 111111111100 11112245688999999999999999999999987654433 33344 67889999999
Q ss_pred CchhhHHhH-HHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceee
Q 015325 241 MPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVA 313 (409)
Q Consensus 241 ~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~ 313 (409)
.|++|..+. +.++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+... ....++++||.++
T Consensus 282 ~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~ 361 (629)
T PRK10524 282 SDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALF 361 (629)
T ss_pred CCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEE
Confidence 999998886 678999999999999863 578999999999999999999999999887643 2345678999999
Q ss_pred ecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC--CCCCCCCCccccccCCceEEEecCCCCCCCCCCCcce
Q 015325 314 CGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG--PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (409)
Q Consensus 314 ~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~--~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Ge 391 (409)
+||+++++++.+++.+.+ ++++++.||+||++..+..... .......+++|+|++|++++|+|+++|++++.|+.||
T Consensus 362 ~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Ge 440 (629)
T PRK10524 362 LAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGV 440 (629)
T ss_pred EeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEE
Confidence 999999999999999998 8899999999999753322111 1123456889999999999999954999999999999
Q ss_pred EEEecC---ccccccCCCCC
Q 015325 392 LSIRGP---TIMKGIFLPHF 408 (409)
Q Consensus 392 i~v~g~---~v~~gY~~~~~ 408 (409)
|+++|| +++.|||+++.
T Consensus 441 l~i~gp~~~~~~~~~~~~~~ 460 (629)
T PRK10524 441 LVIEGPLPPGCMQTVWGDDD 460 (629)
T ss_pred EEEcCCCChhhcCCccCChH
Confidence 999998 57889998763
No 42
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=5.5e-49 Score=397.26 Aligned_cols=364 Identities=18% Similarity=0.244 Sum_probs=288.0
Q ss_pred CCCCCHHHHHhhcc-CCCCCCCCCCcEEEeCCCC------ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc
Q 015325 35 DAPISAVDYVSSLR-ATLPWRDDDTVALINSVTG------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (409)
Q Consensus 35 ~~~~~~~~~l~~~~-~~~~~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~ 107 (409)
+..+|+.+.+.++. .+. |+++|++..+++ +++||+||.++++++|+.|++ +|+++||+|+++++|+++
T Consensus 171 g~~ln~~~~~l~~~~~~~----pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrVai~~pn~~e 245 (728)
T PLN03052 171 GAVLNVAECCLTPKPSKT----DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-LGFEKGDAIAIDMPMNVH 245 (728)
T ss_pred CCEeEHHHHHHHHHhccC----CCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHH
Confidence 55689988777654 345 999999976332 479999999999999999999 999999999999999999
Q ss_pred hHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHH---------HHhh-cCCeEEEeC----------
Q 015325 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---------KLAK-LKHRTILID---------- 167 (409)
Q Consensus 108 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~---------- 167 (409)
++++++||+++|++++|+++.++.+++.+++++++++++|+++.... .+.+ ....++.+.
T Consensus 246 ~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~ 325 (728)
T PLN03052 246 AVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKL 325 (728)
T ss_pred HHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcccccc
Confidence 99999999999999999999999999999999999999999875321 1111 111122221
Q ss_pred ---CCcchhhhcccCC---cccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeC
Q 015325 168 ---SPEFDSMTMSWNS---KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (409)
Q Consensus 168 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 241 (409)
...|++++..... ...........+++++|+|||||||.||||+++|.+++.........+ .+.++|++++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-~l~~~d~~~~~~ 404 (728)
T PLN03052 326 REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-DIRKGDIVCWPT 404 (728)
T ss_pred ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-CCCCCcEEEECC
Confidence 1123333322110 001111123458899999999999999999999999877665555555 678899999999
Q ss_pred chhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCC
Q 015325 242 PYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (409)
Q Consensus 242 p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~ 320 (409)
|++|+++.+.++.+|..|+++++.++ +++..++++++++++|++.++|+++..|.+.......++++||.++++|++++
T Consensus 405 ~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~ 484 (728)
T PLN03052 405 NLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASS 484 (728)
T ss_pred CcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCC
Confidence 99999998888899999999999975 46678999999999999999999999998876556678899999999999999
Q ss_pred HHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCC--cceEEEecCc
Q 015325 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPT 398 (409)
Q Consensus 321 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~--~Gei~v~g~~ 398 (409)
++...++.+.++..++.+.||+||+++.+.... ......++++|.|++|++++|+| ++|++++.|+ .|||+++++.
T Consensus 485 ~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~-~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~ 562 (728)
T PLN03052 485 VDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGS-LLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLM 562 (728)
T ss_pred HHHHHHHHHhcCCCCeEeeccChhhCcccccCC-CCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCC
Confidence 999888888774468999999999976543321 22234568899999999999999 8999999985 5999998652
Q ss_pred --cccccCCC
Q 015325 399 --IMKGIFLP 406 (409)
Q Consensus 399 --v~~gY~~~ 406 (409)
...+|+|+
T Consensus 563 ~~~~~~~~~~ 572 (728)
T PLN03052 563 FGASSTLLNA 572 (728)
T ss_pred CCCCccccCc
Confidence 23345543
No 43
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-49 Score=397.93 Aligned_cols=357 Identities=22% Similarity=0.291 Sum_probs=286.0
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCC-------CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
.|+.+.|.+.++.+ |+++|+++.+ ..+.+||+||.++++++|+.|++ . +++||+|+++++|++++++
T Consensus 21 ~~l~~~l~~~a~~~----~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~-~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 21 TNLVRHVERWAKVR----GDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-V-TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEEcCCChHHHH
Confidence 78999999988888 9999998631 12579999999999999999998 6 8999999999999999999
Q ss_pred HHHHHHHhCCeEccC-CCCCC--HHHHHHHHhhcCCeEEEEcCchHHHHhhc----C----CeEEEeCCCcchhhhcccC
Q 015325 111 LYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAKL----K----HRTILIDSPEFDSMTMSWN 179 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~ 179 (409)
++|||+++|++++|+ ++..+ .+++.+++++++++++|++.+....+.+. . ..++.++. +.... ..
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~ 170 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDA--VPDEV--GA 170 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccc--ccccc--cc
Confidence 999999999999999 55554 68899999999999999988665443221 1 12222221 10000 00
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhC
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALM 259 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G 259 (409)
........++++++|+|||||||.||||++||+++...+......+ +...+++++..+|++|.+|+..++.+++.|
T Consensus 171 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G 246 (631)
T PRK07769 171 ---TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-EGQEGDRGVSWLPFFHDMGLITVLLPALLG 246 (631)
T ss_pred ---ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-CCCCcceEEEeCCCcCchhhHHHHHHHhhC
Confidence 1111234568999999999999999999999999998877776666 678899999999999999997777788899
Q ss_pred CeEEEecC--C--CHHHHHHHHHHhcc---eeEeechHHHHHHHhCC---C--CCCCCCCCcceeeecCCCCCHHHHHHH
Q 015325 260 ETAVVMQR--F--DLKMMLKAVEEFRV---THAAVTPPIVVAMSKGG---S--TDGYDLSSLETVACGAAPLGKDTIMAF 327 (409)
Q Consensus 260 ~~~v~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~l~~l~~~~---~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~ 327 (409)
+++++... + ++..+++.++++++ +.+.++|+++..+.... . ....++++||.+++||+++++++.++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~ 326 (631)
T PRK07769 247 HYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKF 326 (631)
T ss_pred CeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHH
Confidence 99988853 4 89999999999986 78999999887766531 1 114568899999999999999999999
Q ss_pred HHhCC-----CCceecccCcccccceecccCCCCC-------------------------CCCCCccccccCCceEEEec
Q 015325 328 ASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-------------------------CRRWGSTGRLSAGLEAKIVD 377 (409)
Q Consensus 328 ~~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~~-------------------------~~~~~s~G~p~~~~~v~i~d 377 (409)
.+.|+ ...+++.||+||++..++....... .....++|+|+++++++|+|
T Consensus 327 ~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd 406 (631)
T PRK07769 327 NEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVD 406 (631)
T ss_pred HHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEc
Confidence 99872 3469999999998765554221110 00124789999999999999
Q ss_pred CCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 378 PETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 378 ~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+++|++++.|+.|||+|+||+++.||||+++
T Consensus 407 ~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~ 437 (631)
T PRK07769 407 PETASELPDGQIGEIWLHGNNIGTGYWGKPE 437 (631)
T ss_pred CCCCcCCCCCCEEEEEecCCCccccccCChh
Confidence 8899999999999999999999999999874
No 44
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.4e-49 Score=390.85 Aligned_cols=365 Identities=28% Similarity=0.334 Sum_probs=303.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.+.++ |+++|+++.+.+.++||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||++
T Consensus 16 ~~l~~~l~~~~~~~----~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 16 QTIGQLLDRTAARY----PDREALVYRDQGLRWTYREFNEEVDALAKGLLA-LGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 78999999999988 999999986557899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHH-----HHh----hc---------------CCeEEEeCC-----
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-----KLA----KL---------------KHRTILIDS----- 168 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~----~~---------------~~~~~~~~~----- 168 (409)
+|++++|+++..+.+++.++++.+++++++++..... .+. ++ ...++..+.
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPG 170 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcc
Confidence 9999999999999999999999999999999865321 111 00 001222221
Q ss_pred -CcchhhhcccCCc----ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCch
Q 015325 169 -PEFDSMTMSWNSK----HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (409)
Q Consensus 169 -~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~ 243 (409)
..+.++....... .........++++++++|||||||.||+|.+||++++..+......+ ++..+|+++...|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 249 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM-KLTEEDRLCIPVPL 249 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc-CCCCCceEEEecCc
Confidence 1222222111000 00111234568899999999999999999999999998888877777 78899999999999
Q ss_pred hhHHhH-HHHHHHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCH
Q 015325 244 FHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (409)
Q Consensus 244 ~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~ 321 (409)
+|.+++ ..++.++..|+++++. ..+++..+++.++++++|.+.++|+++..++.........+++||.+++||++++.
T Consensus 250 ~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~ 329 (559)
T PRK08315 250 YHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPI 329 (559)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCH
Confidence 999998 6789999999999854 46899999999999999999999999999988766666678999999999999999
Q ss_pred HHHHHHHHhCCCCceecccCcccccceecccCCC-CCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccc
Q 015325 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (409)
Q Consensus 322 ~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~ 400 (409)
++.+++.+.++..++++.||+||++..++..... .......++|+|+++++++|+|+++|++++.|+.|||+|+|++++
T Consensus 330 ~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~ 409 (559)
T PRK08315 330 EVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVM 409 (559)
T ss_pred HHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhh
Confidence 9999999999666799999999998765543221 122356789999999999999977799999999999999999999
Q ss_pred cccCCCCC
Q 015325 401 KGIFLPHF 408 (409)
Q Consensus 401 ~gY~~~~~ 408 (409)
.|||+++.
T Consensus 410 ~gy~~~~~ 417 (559)
T PRK08315 410 KGYWNDPE 417 (559)
T ss_pred hhhcCChh
Confidence 99998863
No 45
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=8.3e-49 Score=387.44 Aligned_cols=364 Identities=23% Similarity=0.316 Sum_probs=300.4
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCC----CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~ 112 (409)
..++.+.+...+..+ |+++|++... ....+||+||+++++++|.+|++ .|+++|++|+++++|+.++++++
T Consensus 21 ~~~~~~~~~~~~~~~----p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~ 95 (538)
T TIGR03208 21 DRTINDHFDAAVANC----PDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-LGVGRGDVVSFQLPNRWEFTALY 95 (538)
T ss_pred cCcHHHHHHHHHHHC----CCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHH
Confidence 368999999999888 9999998521 24689999999999999999999 99999999999999999999999
Q ss_pred HHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH-----HHHhh----c-C-CeEEEeCCC---cchhhhccc
Q 015325 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAK----L-K-HRTILIDSP---EFDSMTMSW 178 (409)
Q Consensus 113 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~----~-~-~~~~~~~~~---~~~~~~~~~ 178 (409)
+||+++|++++|+++..+.+++.++++.++++++++++... ..... . . ..++..+.. .++..+...
T Consensus 96 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (538)
T TIGR03208 96 LACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTP 175 (538)
T ss_pred HHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhcc
Confidence 99999999999999999999999999999999999987532 11111 1 1 123333221 222222111
Q ss_pred CCc--cc----ccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HH
Q 015325 179 NSK--HE----LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FF 251 (409)
Q Consensus 179 ~~~--~~----~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~ 251 (409)
... .. .......++++++++|||||||.||+|+++|+++...+......+ +...+|++++.+|++|..++ ..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~ 254 (538)
T TIGR03208 176 ERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-ELGGGDVILMASPMAHQTGFMYG 254 (538)
T ss_pred ccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-CCCCCCeEEEeCCchhHHHHHHH
Confidence 000 00 111234568999999999999999999999999998888877777 67889999999999999887 67
Q ss_pred HHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhC
Q 015325 252 CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKF 331 (409)
Q Consensus 252 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~ 331 (409)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.........+++++|.+++||+++++++.++|.+.+
T Consensus 255 ~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 334 (538)
T TIGR03208 255 LMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL 334 (538)
T ss_pred HHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc
Confidence 89999999999999889999999999999999999999999998876544445678999999999999999999999998
Q ss_pred CCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 332 PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 332 ~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++++++.||+||++...+............++|+|+++++++|+| ++|++++.|+.|||+++|+.++.|||++|.
T Consensus 335 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 409 (538)
T TIGR03208 335 -GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPH 409 (538)
T ss_pred -CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCcc
Confidence 899999999999977655422221122346789999999999999 789999999999999999999999999864
No 46
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-49 Score=459.30 Aligned_cols=354 Identities=19% Similarity=0.250 Sum_probs=306.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.++|.++++++ |+++|++++ ++++||+||.++++++|+.|++ .|+++|++|+|+++|++++++++|||++
T Consensus 3095 ~~~~~l~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~vv~~lavl~ 3167 (3956)
T PRK12467 3095 RLVHQLIEAQVART----PEAPALVFG--DQQLSYAELNRRANRLAHRLIA-IGVGPDVLVGVAVERSVEMIVALLAVLK 3167 (3956)
T ss_pred ccHHHHHHHHHHhC----CCcceEeeC--CcccCHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEeCCCHHHHHHHHHHHh
Confidence 68999999999999 999999998 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-CCeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
+|++++|++|.++.+++.++++.+++++++++......+... ....+.++...... . ..........+++++|
T Consensus 3168 aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~a~ 3241 (3956)
T PRK12467 3168 AGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLNG---Y---SENNPSTRVMGENLAY 3241 (3956)
T ss_pred hCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhcc---c---CCCCCcccCCCCceEE
Confidence 999999999999999999999999999999998765544321 22233333211110 0 0112223456789999
Q ss_pred EEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC--CCHHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~ 274 (409)
|+|||||||.||||+++|+++.+.+......+ ++.++|+++...|++|..+.+.++.++..|+++++.+. +++..++
T Consensus 3242 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~ 3320 (3956)
T PRK12467 3242 VIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-ELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELW 3320 (3956)
T ss_pred EEEccCCCCCcceeeehhHHHHHHHHHHHHhc-CCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHH
Confidence 99999999999999999999999998888888 78999999999999999999999999999999999875 7899999
Q ss_pred HHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC
Q 015325 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (409)
Q Consensus 275 ~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (409)
+.|.++++|++.++|+++..+.+... ..++++||.+++|||++++++.++|.+.++++.++|.||+||++..++....
T Consensus 3321 ~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 3398 (3956)
T PRK12467 3321 QAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKC 3398 (3956)
T ss_pred HHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEec
Confidence 99999999999999999999987532 3357889999999999999999999999988999999999999876654322
Q ss_pred CCC---CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 355 PDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 355 ~~~---~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
... .....++|+|++|++++|+| ++++++|.|+.|||+|+|+++++||||+|.
T Consensus 3399 ~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~ 3454 (3956)
T PRK12467 3399 GGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPS 3454 (3956)
T ss_pred ccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcc
Confidence 111 12346899999999999999 899999999999999999999999999874
No 47
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-49 Score=395.55 Aligned_cols=365 Identities=22% Similarity=0.264 Sum_probs=284.3
Q ss_pred CCCCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCC--C--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcC
Q 015325 28 PIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT--G--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLST 103 (409)
Q Consensus 28 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~ 103 (409)
..++|+.....++.+.|.+.++++ |+++|+++.+. + +++||+||.++++++|++|++ .|+++||+|+++++
T Consensus 39 ~~~~~~~~~~~~l~~~l~~~a~~~----pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~ 113 (624)
T PRK12582 39 KSRHPLGPYPRSIPHLLAKWAAEA----PDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-LGLDPGRPVMILSG 113 (624)
T ss_pred ecCCCCCCcccCHHHHHHHHHHHC----CCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecC
Confidence 345666666789999999999998 99999987521 1 689999999999999999999 99999999999999
Q ss_pred CCCchHHHHHHHHHhCCeEccCCCCCCH-----HHHHHHHhhcCCeEEEEcCch--HHHHh---hcCCeEEEeCCC----
Q 015325 104 NSIEIPILYFSLLSLGVIISPANPVNTE-----SEISRQIQLSNPVIAFATSSV--VHKLA---KLKHRTILIDSP---- 169 (409)
Q Consensus 104 ~~~~~~~~~~A~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~--~~~~~---~~~~~~~~~~~~---- 169 (409)
|+++++++++||+++|++++|+++.++. +++.+++++++++++|+++.. ...+. ....+++..+..
T Consensus 114 n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 193 (624)
T PRK12582 114 NSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGI 193 (624)
T ss_pred CCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCccc
Confidence 9999999999999999999999998874 899999999999999998642 11111 123334443321
Q ss_pred ---cchhhhcccCCc-ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCC---CCCEEEEeCc
Q 015325 170 ---EFDSMTMSWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV---SPAVMLFTMP 242 (409)
Q Consensus 170 ---~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~---~~d~~l~~~p 242 (409)
.+.++....... .........++++++|+|||||||.||||++||+++........... ... ..++++..+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~~~~~~~l~~lP 272 (624)
T PRK12582 194 ASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-PREPDPPPPVSLDWMP 272 (624)
T ss_pred ccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-cccCCCCCceEEEech
Confidence 123322211100 00011234568999999999999999999999999987776654443 222 2579999999
Q ss_pred hhhHHhH-HHHHHHHHhCCeEEEecC-CCH---HHHHHHHHHhcceeEeechHHHHHHHhCCCCC----CCCCCCcceee
Q 015325 243 YFHIYGL-FFCFRAAALMETAVVMQR-FDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD----GYDLSSLETVA 313 (409)
Q Consensus 243 ~~~~~g~-~~~~~~l~~G~~~v~~~~-~~~---~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~----~~~l~~Lr~v~ 313 (409)
++|.+++ ..++.++..|+++++.+. +++ ..+++.++++++|++.++|.++..|.+..... ...+++||.++
T Consensus 273 l~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~ 352 (624)
T PRK12582 273 WNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMA 352 (624)
T ss_pred HHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEE
Confidence 9999998 566788999999998753 333 45677788999999999999999887643211 22467899999
Q ss_pred ecCCCCCHHHHHHHHHhC-----CCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCC
Q 015325 314 CGAAPLGKDTIMAFASKF-----PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK 388 (409)
Q Consensus 314 ~~G~~~~~~~~~~~~~~~-----~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~ 388 (409)
+||+++++++.++|.+.+ .++++++.||+||++..++.. .......+++|+|+||++++|++ .|+
T Consensus 353 ~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~--~~~~~~~~svG~p~pg~~v~i~~--------~G~ 422 (624)
T PRK12582 353 YGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGT--HWDTERVGLIGLPLPGVELKLAP--------VGD 422 (624)
T ss_pred ecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecc--cCCCCCCCCCCcCCCCcEEEEcc--------CCC
Confidence 999999999999999863 146899999999997765531 12235578999999999999964 478
Q ss_pred cceEEEecCccccccCCCCC
Q 015325 389 EGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 389 ~Gei~v~g~~v~~gY~~~~~ 408 (409)
.|||+|+|++++.|||++|.
T Consensus 423 ~GEl~vrg~~v~~GY~~~p~ 442 (624)
T PRK12582 423 KYEVRVKGPNVTPGYHKDPE 442 (624)
T ss_pred ceEEEEECCcccccccCCcc
Confidence 89999999999999999875
No 48
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-49 Score=390.66 Aligned_cols=362 Identities=27% Similarity=0.410 Sum_probs=299.2
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.+.+.+.++ |+++|+++. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 32 ~~l~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 104 (573)
T PRK05605 32 TTLVDLYDNAVARF----GDRPALDFF--GATTTYAELGKQVRRAAAGLRA-LGVRPGDRVAIVLPNCPQHIVAFYAVLR 104 (573)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999988 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCe-EEEeCC------------------------
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDS------------------------ 168 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~------------------------ 168 (409)
+|++++|+++.++.+++.+++++++++++|+++.....+..+ ... ++..+.
T Consensus 105 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
T PRK05605 105 LGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARA 184 (573)
T ss_pred cCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccc
Confidence 999999999999999999999999999999987655443221 111 111110
Q ss_pred ---------CcchhhhcccCCc--ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC-CCCCCE
Q 015325 169 ---------PEFDSMTMSWNSK--HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAV 236 (409)
Q Consensus 169 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~~d~ 236 (409)
..|.++....... ..........+++++++|||||||.||+|.+||+++...+......+.+ ....++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 264 (573)
T PRK05605 185 ALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPER 264 (573)
T ss_pred ccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcE
Confidence 0111111110000 0011123456889999999999999999999999998776654444322 235789
Q ss_pred EEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeec
Q 015325 237 MLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG 315 (409)
Q Consensus 237 ~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~ 315 (409)
+++..|++|.+|+ ..++.++..|+++++.+.++++.+++.++++++|.+.++|++++.|.+........+++||.+++|
T Consensus 265 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 344 (573)
T PRK05605 265 VLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSG 344 (573)
T ss_pred EEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEEC
Confidence 9999999999998 667788999999999988999999999999999999999999999998776666678999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCC-CCCCCCCCcceEEE
Q 015325 316 AAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPET-GDSLPPGKEGELSI 394 (409)
Q Consensus 316 G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~-g~~~~~g~~Gei~v 394 (409)
|+++++++.++|.+.+ +.++++.||+||+++.++... ......++++|+|++++.++|+|+++ +++++.|+.|||++
T Consensus 345 g~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v 422 (573)
T PRK05605 345 AMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNP-MSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLV 422 (573)
T ss_pred CCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCC-cccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEE
Confidence 9999999999999988 889999999999987655422 22234467899999999999999666 69999999999999
Q ss_pred ecCccccccCCCCC
Q 015325 395 RGPTIMKGIFLPHF 408 (409)
Q Consensus 395 ~g~~v~~gY~~~~~ 408 (409)
+|+.++.||++++.
T Consensus 423 ~~~~~~~gy~~~~~ 436 (573)
T PRK05605 423 RGPQVFKGYWNRPE 436 (573)
T ss_pred ecCchhhhhcCChh
Confidence 99999999998764
No 49
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-49 Score=388.76 Aligned_cols=361 Identities=20% Similarity=0.229 Sum_probs=285.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.++++ |+++|+++.+.+..+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||++
T Consensus 14 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~e~~~~~lA~~~ 88 (540)
T PRK05857 14 STVLDRVFEQARQQ----PEAIALRRCDGTSALRYRELVAEVGGLAADLRA-QSVSRGSRVLVISDNGPETYLSVLACAK 88 (540)
T ss_pred cchHHHHHHHHhhC----CCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-hCcCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 68999999999998 999999875445789999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCeEEEeCCCcchh-hhcccCCcccccccccCC
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDSPEFDS-MTMSWNSKHELDRAKVCQ 191 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 191 (409)
+|++++|+++..+.+++.++++.++++++|+++........+ ....+.++...... .................+
T Consensus 89 ~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (540)
T PRK05857 89 LGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQGS 168 (540)
T ss_pred cCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCCC
Confidence 999999999999999999999999999999987643221111 11222222111000 000000000111223456
Q ss_pred CCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc----cCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC
Q 015325 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA----SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (409)
Q Consensus 192 ~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~ 267 (409)
+++++++|||||||.||||.+||+++......... .+ ....+++.+..+|++|.++++..+.++..|+++++ ..
T Consensus 169 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~-~~ 246 (540)
T PRK05857 169 EDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWV-TWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVT-GG 246 (540)
T ss_pred CCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcccccc-ccccCceeeecCCccccchHHHHHHHhhcceeEEe-cC
Confidence 88999999999999999999999999876543321 12 35567899999999999999878899999998876 45
Q ss_pred CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccc
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTA 347 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 347 (409)
.++..+++.|+++++|+++++|+++..+.+.......+++++|.+++||++++....+ |.+.+ ++++++.||+||++.
T Consensus 247 ~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~ 324 (540)
T PRK05857 247 ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGC 324 (540)
T ss_pred CChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCc
Confidence 6889999999999999999999999999987665566789999999999999988775 55566 899999999999976
Q ss_pred eecccCCCCC---CCCCCccccccCCceEEEecCCCCC-CC-----CCCCcceEEEecCccccccCCCCC
Q 015325 348 GVFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGD-SL-----PPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 348 ~~~~~~~~~~---~~~~~s~G~p~~~~~v~i~d~~~g~-~~-----~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.......... ....+++|+|++|++++|+| ++++ ++ +.|+.|||+|+|++++.|||+++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~ 393 (540)
T PRK05857 325 TALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPE 393 (540)
T ss_pred eeeecccccccccccccCCcCcccCCcEEEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhCCcc
Confidence 4433221111 12457899999999999999 5554 33 457899999999999999999874
No 50
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.2e-49 Score=386.64 Aligned_cols=360 Identities=23% Similarity=0.323 Sum_probs=307.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.++|...+.++ |+++|+++. +..+||+||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 11 ~~l~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gi~~~~~V~l~~~~~~~~~~~~~a~~~ 83 (523)
T PRK08316 11 QTIGDILRRSARRY----PDKTALVFG--DRSWTYAELDAAVNRVAAALLD-LGLKKGDRVAALGHNSDAYALLWLACAR 83 (523)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 67999999999988 999999988 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCeEEEe-C----------CCcchhhhcccCCcc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILI-D----------SPEFDSMTMSWNSKH 182 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~-~----------~~~~~~~~~~~~~~~ 182 (409)
+|++++|+++..+.+++.++++.+++++++++.+....+... ....... . ...+.........
T Consensus 84 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 161 (523)
T PRK08316 84 AGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGSV-- 161 (523)
T ss_pred cCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCCC--
Confidence 999999999999999999999999999999998776555421 1111110 0 0111111111110
Q ss_pred cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCe
Q 015325 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (409)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~ 261 (409)
.........+++++++|||||||.||+|.+||+++..........+ ++.++++++..+|++|.+++ ..++.++..|++
T Consensus 162 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~ 240 (523)
T PRK08316 162 AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-DMSADDIPLHALPLYHCAQLDVFLGPYLYVGAT 240 (523)
T ss_pred ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCCceEEEccCCchhhhHHHHHHHHHhcCce
Confidence 1122345678899999999999999999999999998887777777 68899999999999999998 556778999999
Q ss_pred EEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccC
Q 015325 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (409)
Q Consensus 262 ~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 341 (409)
+++.+..++..++..++++++|++.++|+++..+.+....+..++++||.+++||++++.++.+.+++.+++.++++.||
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 241 NVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred EEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 99998889999999999999999999999999999887666677889999999999999999999999998999999999
Q ss_pred cccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+||++...+...........+++|+|+++++++|+| ++|++++.|+.|||+++|++++.||++++.
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~ 386 (523)
T PRK08316 321 QTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPE 386 (523)
T ss_pred ccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHH
Confidence 999987665533323334568899999999999999 789999999999999999999999998753
No 51
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.4e-48 Score=383.10 Aligned_cols=356 Identities=24% Similarity=0.350 Sum_probs=300.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
-++.+.+.+++ .+ |+++|+.+. +++.+||.||.++++++|+.|++ .|+++||+|+++++|+.+++++++||++
T Consensus 3 ~~l~~~~~~~~-~~----~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~v~i~~~~~~e~~v~~la~~~ 75 (504)
T PRK07514 3 NNLFDALRAAF-AD----RDAPFIETP-DGLRYTYGDLDAASARLANLLVA-LGVKPGDRVAVQVEKSPEALALYLATLR 75 (504)
T ss_pred ccHHHHHHHHh-hC----CCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57889999999 77 999999874 36799999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCe-EEEeCCCc---chhhhcccCCccccccccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPE---FDSMTMSWNSKHELDRAKV 189 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 189 (409)
+|++++|+++..+.+++..+++.++++++++++.....+... ... ++.++... +.+...... ........
T Consensus 76 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 153 (504)
T PRK07514 76 AGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAP--DDFETVPR 153 (504)
T ss_pred cCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcC--cccCcccC
Confidence 999999999999999999999999999999998766554322 222 33333211 111111111 01122344
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF 268 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~ 268 (409)
.++++++++|||||||.||+|.+||+++...+......+ +..++|++++..|++|..++ ..++.++..|+++++.+..
T Consensus 154 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 232 (504)
T PRK07514 154 GADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-RFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKF 232 (504)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCC
Confidence 678999999999999999999999999998887777666 67889999999999999998 6788999999999999989
Q ss_pred CHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccce
Q 015325 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (409)
Q Consensus 269 ~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (409)
++..+++.+ +++|.+.++|+++..++.........++++|.+++||+++++++.+.|++.+ +.++++.||+||++..
T Consensus 233 ~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 309 (504)
T PRK07514 233 DPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMN 309 (504)
T ss_pred CHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeeccccccccc
Confidence 999999999 4799999999999999987665566688999999999999999999999998 7899999999998754
Q ss_pred ecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 349 VFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 349 ~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.+. .........++|.|+++++++|+||+++++++.|+.|||+|+|++++.||++++.
T Consensus 310 ~~~--~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~ 367 (504)
T PRK07514 310 TSN--PYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPE 367 (504)
T ss_pred ccC--CccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCch
Confidence 432 2222334578999999999999999999999999999999999999999999874
No 52
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.6e-49 Score=425.48 Aligned_cols=353 Identities=18% Similarity=0.217 Sum_probs=301.4
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.+..+ |+++|++++ +..+||+||.++++++|+.|.+ .|+++|++|+++++++.+++++++||++
T Consensus 458 ~~l~~~~~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~g~~V~l~~~~~~~~i~~~la~~~ 530 (1296)
T PRK10252 458 TTLSALVAQQAAKT----PDAPALADA--RYQFSYREMREQVVALANLLRE-RGVKPGDSVAVALPRSVFLTLALHAIVE 530 (1296)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 68999999999988 999999998 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-CeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
+|++++|++++.+.+++.++++.+++++++++.+....+.... ......+. ...... ........++++++
T Consensus 531 ~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~a~ 602 (1296)
T PRK10252 531 AGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYNA-----PLAPQG---AAPLQLSQPHHTAY 602 (1296)
T ss_pred hCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeeccc-----cccccc---CCCCCCCCCCCeEE
Confidence 9999999999999999999999999999999987655543321 11111111 110000 01111235788999
Q ss_pred EEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec---CCCHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~~~~~ 273 (409)
|+|||||||.||||+++|+++.+.+.+....+ ++.+.|++++..|++|..+++.++.++..|+++++.+ ..++..+
T Consensus 603 i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~ 681 (1296)
T PRK10252 603 IIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-PLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAM 681 (1296)
T ss_pred EEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHH
Confidence 99999999999999999999999998888888 7899999999999999999999999999999999986 3689999
Q ss_pred HHHHHHhcceeEeechHHHHHHHhCCCCC--CCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecc
Q 015325 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFR 351 (409)
Q Consensus 274 ~~~i~~~~~t~l~~~p~~l~~l~~~~~~~--~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~ 351 (409)
++.++++++|++.++|+++..+++..... ...+++||.+++||+++++++.++|.+.+ ++++++.||+||++..++.
T Consensus 682 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~ 760 (1296)
T PRK10252 682 QQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSW 760 (1296)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeee
Confidence 99999999999999999999988764322 23467899999999999999999999987 8999999999999876654
Q ss_pred cCCCCC-----CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 352 TVGPDE-----CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 352 ~~~~~~-----~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
...... .....++|+|+++++++|+| +++++++.|+.|||+|+|++++.||++++.
T Consensus 761 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~ 821 (1296)
T PRK10252 761 YPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPD 821 (1296)
T ss_pred eecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcc
Confidence 322111 23356799999999999999 899999999999999999999999999874
No 53
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2.1e-48 Score=383.58 Aligned_cols=361 Identities=24% Similarity=0.291 Sum_probs=299.4
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
++..++.+++.+.+..+ |+++|++++ ++++||+||.++++++|..|.+ .|+++|++|+++++|+.+++++++|
T Consensus 20 ~~~~~l~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la 92 (527)
T TIGR02275 20 WQDKPLTDILRDQAARY----PDAIAIICG--NRQWSYRELDQRADNLAAGLTK-LGIGQGDTAVVQLPNIAEFYIVFFA 92 (527)
T ss_pred ccCCcHHHHHHHHHHHC----CCceEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHH
Confidence 34478999999999888 999999987 7899999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH--------HHHhh-c-CCeE-EEeCCC----cchhhhcccC
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV--------HKLAK-L-KHRT-ILIDSP----EFDSMTMSWN 179 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--------~~~~~-~-~~~~-~~~~~~----~~~~~~~~~~ 179 (409)
|+++|++++++++..+.+++.++++.+++++++++.... ..+.. . .... +..... ..........
T Consensus 93 ~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (527)
T TIGR02275 93 LLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPA 172 (527)
T ss_pred HHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcC
Confidence 999999999999999999999999999999999986531 11111 1 1111 111111 0111111110
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHH--HHHHHHH
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAA 257 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~--~~~~~l~ 257 (409)
. ........++++++++|||||||.||+|.+||+++...+......+ ....+|++++.+|++|.+++. .++.++.
T Consensus 173 ~--~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~ 249 (527)
T TIGR02275 173 E--PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-WLTQQTRYLCALPAAHNYPLSSPGALGVFY 249 (527)
T ss_pred c--cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCCEEEECCChHhhhhhhHHHHHHHHh
Confidence 0 1112244678999999999999999999999999998888777766 688899999999999999984 5788999
Q ss_pred hCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCcee
Q 015325 258 LMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLV 337 (409)
Q Consensus 258 ~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~ 337 (409)
.|+++++.+.+++..++..++++++|++.++|+++..+.+........+++||.+++||+++++++.+++++.+ +++++
T Consensus 250 ~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~ 328 (527)
T TIGR02275 250 AGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQ 328 (527)
T ss_pred cCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEE
Confidence 99999998888999999999999999999999999999887666666788999999999999999999999998 89999
Q ss_pred cccCcccccceecccCCCCCCCCCCcccccc-CCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 338 QAYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 338 ~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~-~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+.||+||++..... ..........++|+|+ ++.+++|+| ++|+++++|+.|||+++|+.++.|||+++.
T Consensus 329 ~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~ 398 (527)
T TIGR02275 329 QVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPE 398 (527)
T ss_pred eeeccCccCccccC-CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChh
Confidence 99999996543322 1112223456899999 588999999 889999999999999999999999999864
No 54
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.8e-48 Score=384.58 Aligned_cols=359 Identities=24% Similarity=0.353 Sum_probs=297.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.++|...++++ ||++|++++ +++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||++
T Consensus 23 ~~l~~~~~~~~~~~----pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~-~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 23 ASLADYWQQTARAM----PDKIAVVDN-HGASYTYSALDHAASRLANWLLA-KGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 67999999999988 999999976 34799999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCch-----HHHHh----hc-CC-eEEEeCCC-------cchhhhcccC
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDSP-------EFDSMTMSWN 179 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~~~~~~~-------~~~~~~~~~~ 179 (409)
+|++++|+++..+.+++.++++.++++++++++.. ...+. .. .. .++.++.. .+.++.....
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYE 176 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCC
Confidence 99999999999999999999999999999997632 11111 11 11 23332211 1112221111
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHh
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~ 258 (409)
. .........+++++|+|||||||.||+|.++|++++.........+ +..+.|++++..|++|.+++ ..++.++..
T Consensus 177 ~--~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 177 P--LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-NLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred c--ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 1 1112234568899999999999999999999999988877766666 68899999999999999998 678889999
Q ss_pred CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceec
Q 015325 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (409)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 338 (409)
|+++++.+.+++..++..++++++|++.++|+.+..+++.......++++||.+++||+++++++.+++.+. ++++++
T Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 254 GARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 999999999999999999999999999998888777777655555677899999999999999999988764 899999
Q ss_pred ccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.||+||++...+............++|+|++++.++++| ++++++++|+.|||+++|++++.|||++++
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 400 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPE 400 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHH
Confidence 999999987655422211122346789999999999999 899999999999999999999999999864
No 55
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.4e-49 Score=395.03 Aligned_cols=362 Identities=20% Similarity=0.219 Sum_probs=281.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCC-----CC--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSV-----TG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
.|+.+.|.+.++++ |+++|+.... .+ ..+||+|+.++++++|+.|.+ .|+++||+|+|+++|+++|++
T Consensus 42 ~t~~~~~~~~~~~~----p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ew~~ 116 (660)
T PLN02430 42 TTAWDIFSKSVEKY----PDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-SGAEPGSRVGIYGSNCPQWIV 116 (660)
T ss_pred CCHHHHHHHHHHhC----CCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 68999999999998 9999996421 11 347999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHH-HHhh----c-CCe-EEEeCCC--------------
Q 015325 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-KLAK----L-KHR-TILIDSP-------------- 169 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~----~-~~~-~~~~~~~-------------- 169 (409)
+++||+++|++++|+++.++.+++.+++++++++++|++..... .+.. . ..+ ++.++..
T Consensus 117 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 196 (660)
T PLN02430 117 AMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVK 196 (660)
T ss_pred HHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcE
Confidence 99999999999999999999999999999999999999875332 2211 1 122 3333211
Q ss_pred --cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhcc---C-CCCCCCCEEEEeCch
Q 015325 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS---S-PKRVSPAVMLFTMPY 243 (409)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~---~-~~~~~~d~~l~~~p~ 243 (409)
.|+++...+... ........++++++|+|||||||.||||++||+++...+...... + ..+...|++++.+|+
T Consensus 197 ~~~~~~~~~~~~~~-~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl 275 (660)
T PLN02430 197 TYSWIDFLHMGKEN-PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPL 275 (660)
T ss_pred EEEHHHHHHhhccC-CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcH
Confidence 122322222111 111223357899999999999999999999999998877655322 1 135788999999999
Q ss_pred hhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCC-----------------------
Q 015325 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----------------------- 300 (409)
Q Consensus 244 ~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~----------------------- 300 (409)
+|.++....+.++..|+++++... ++..+++.|+++++|++.++|.+++.+.+...
T Consensus 276 ~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 354 (660)
T PLN02430 276 AHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLA 354 (660)
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 999998656677899999988754 78899999999999999999999987764210
Q ss_pred --------CCCCC-------------C-CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCC
Q 015325 301 --------TDGYD-------------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (409)
Q Consensus 301 --------~~~~~-------------l-~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 358 (409)
..... + ++||.+++||+++++++.+.+ +.+.++.+++.||+||+++.++... ....
T Consensus 355 ~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~-~~~~~~~i~~~YG~TE~~~~~~~~~-~~~~ 432 (660)
T PLN02430 355 WMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL-RVTSCAFVVQGYGLTETLGPTTLGF-PDEM 432 (660)
T ss_pred HHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH-HHhcCCCeeeecchhhhhhceEeec-cccC
Confidence 00000 1 579999999999999986655 4553678999999999987665422 2223
Q ss_pred CCCCccccccCCceEEEec-CCCC-CCCCCCCcceEEEecCccccccCCCCC
Q 015325 359 RRWGSTGRLSAGLEAKIVD-PETG-DSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 359 ~~~~s~G~p~~~~~v~i~d-~~~g-~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
..++++|+|+++++++|+| ++.| .+++.+..|||+|+||+++.|||++|.
T Consensus 433 ~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e 484 (660)
T PLN02430 433 CMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPE 484 (660)
T ss_pred CCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChH
Confidence 4568999999999999987 3444 566777889999999999999999874
No 56
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-48 Score=391.59 Aligned_cols=365 Identities=19% Similarity=0.176 Sum_probs=289.6
Q ss_pred CCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCC---CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCC
Q 015325 30 DLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI 106 (409)
Q Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~ 106 (409)
.|.+ +..+|+.+.+.++ .+ |+++|+++.+. .+++||+||.+++.++|+.|++ .|+++||+|+++++|++
T Consensus 79 ~wf~-~~~~n~~~~~~~~--~~----~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ 150 (655)
T PRK03584 79 RWFP-GARLNYAENLLRH--RR----DDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-LGVGPGDRVAAYLPNIP 150 (655)
T ss_pred eeCC-CCEeeHHHHhhcc--CC----CCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCH
Confidence 4443 5568999988874 45 89999997522 2689999999999999999999 99999999999999999
Q ss_pred chHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH---------HHHh----hcC-C-eEEEeCC---
Q 015325 107 EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA----KLK-H-RTILIDS--- 168 (409)
Q Consensus 107 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~~-~-~~~~~~~--- 168 (409)
++++++|||+++|++++++++.++.+++.+++++++++++|+++... ..+. ... . .++.++.
T Consensus 151 e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 230 (655)
T PRK03584 151 ETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGP 230 (655)
T ss_pred HHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCC
Confidence 99999999999999999999999999999999999999999976431 1111 111 1 2222221
Q ss_pred ----------CcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHH-HHHhhccCCCCCCCCEE
Q 015325 169 ----------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA-VASSFASSPKRVSPAVM 237 (409)
Q Consensus 169 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~~d~~ 237 (409)
..|.++...... ..........+++++|+|||||||.||||++||++++.. .......+ .+.++|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~ 308 (655)
T PRK03584 231 AAAAAALPGALLWEDFLAPAEA-AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-DLGPGDRF 308 (655)
T ss_pred cccccccCCcccHHHHhhcccc-CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-CCCCCCEE
Confidence 112333221110 011223445689999999999999999999999987644 44444455 67889999
Q ss_pred EEeCchhhHHhHHHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcce
Q 015325 238 LFTMPYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLET 311 (409)
Q Consensus 238 l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~ 311 (409)
++..++.|..+. .++.++..|+++++.++ +++..+++.++++++|++.++|+++..+.+... ....++++||.
T Consensus 309 ~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~ 387 (655)
T PRK03584 309 FWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRT 387 (655)
T ss_pred EEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEE
Confidence 999999887543 46789999999999853 589999999999999999999999999987532 23456889999
Q ss_pred eeecCCCCCHHHHHHHHHhC-CCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcc
Q 015325 312 VACGAAPLGKDTIMAFASKF-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (409)
Q Consensus 312 v~~~G~~~~~~~~~~~~~~~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~G 390 (409)
+++||+++++++.++|.+.+ +++.+.+.||+||+++..... .......++++|.|++|++++|+| ++|+++ .|+.|
T Consensus 388 i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~G 464 (655)
T PRK03584 388 IGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGG-NPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVG 464 (655)
T ss_pred EEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccC-CCCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCce
Confidence 99999999999999999998 468899999999986544321 222334568899999999999999 889999 89999
Q ss_pred eEEEecC--ccccccCCCCC
Q 015325 391 ELSIRGP--TIMKGIFLPHF 408 (409)
Q Consensus 391 ei~v~g~--~v~~gY~~~~~ 408 (409)
||+|+|| +++.|||+++.
T Consensus 465 eL~v~gp~p~~~~gy~~~~~ 484 (655)
T PRK03584 465 ELVCTKPFPSMPLGFWNDPD 484 (655)
T ss_pred EEEEccCCCCCcceeeCCCc
Confidence 9999996 79999999874
No 57
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-48 Score=382.83 Aligned_cols=352 Identities=18% Similarity=0.211 Sum_probs=292.3
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
+.|+.+.|.+.+..+ |+++|++++ +..+||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+
T Consensus 34 ~~~~~~~~~~~a~~~----p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~ 106 (516)
T PRK13383 34 GTNPYTLLAVTAARW----PGRTAIIDD--DGALSYRELQRATESLARRLTR-DGVAPGRAVGVMCRNGRGFVTAVFAVG 106 (516)
T ss_pred CCcHHHHHHHHHHHC----CCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 488999999888888 999999987 6799999999999999999999 999999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
++|++++|+++.++.+++.++++++++++++++++....+......+..++..... . ... . ......++.++
T Consensus 107 ~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~--~~p~~~~~~~~ 178 (516)
T PRK13383 107 LLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAG-A-EES----G--GRPAVAAPGRI 178 (516)
T ss_pred HhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhh-h-hcC----C--CCCCCCCCCcE
Confidence 99999999999999999999999999999999987766555433333333321110 0 000 0 01112355678
Q ss_pred EEcCCCCCCCcchhhhccHHHHHH--HHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAA--VASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMML 274 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~--~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~ 274 (409)
++|||||||.||+|.++|...... ........ +...+|+++...|++|.+++..++.++..|+++++...+++..++
T Consensus 179 il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~ 257 (516)
T PRK13383 179 VLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-RLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAAL 257 (516)
T ss_pred EEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-ccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHH
Confidence 999999999999999999743211 11222334 577889999999999999997788899999999998889999999
Q ss_pred HHHHHhcceeEeechHHHHHHHhCCCC--CCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceeccc
Q 015325 275 KAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (409)
Q Consensus 275 ~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (409)
+.++++++|.+.++|+++..+...... ....++++|.+++||+++++++.++|++.| +..+++.||+||++......
T Consensus 258 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~ 336 (516)
T PRK13383 258 AQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALAT 336 (516)
T ss_pred HHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceecc
Confidence 999999999999999999999875432 233578999999999999999999999999 88999999999997655432
Q ss_pred CCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCC
Q 015325 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 353 ~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~ 407 (409)
........+++|+|+++++++|+| ++|+++++|+.|||+++|+.++.||++++
T Consensus 337 -~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~ 389 (516)
T PRK13383 337 -PADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGG 389 (516)
T ss_pred -ccccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCc
Confidence 222234567899999999999999 78999999999999999999999999765
No 58
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=4.8e-48 Score=381.75 Aligned_cols=355 Identities=24% Similarity=0.303 Sum_probs=300.4
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.++|.+.++.+ |+++|++++ ++++||.||.+++.++|..|.+ .|+++|++|+++++|+++++++++||++
T Consensus 21 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~-~gi~~g~~V~v~~~n~~~~~~~~lA~~~ 93 (542)
T PRK06155 21 RTLPAMLARQAERY----PDRPLLVFG--GTRWTYAEAARAAAAAAHALAA-AGVKRGDRVALMCGNRIEFLDVFLGCAW 93 (542)
T ss_pred cCHHHHHHHHHHHC----CCCeEEEeC--CccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 78999999999999 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-----C-eEEEeCCCc-------chhhhcccCCcccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----H-RTILIDSPE-------FDSMTMSWNSKHEL 184 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~~-------~~~~~~~~~~~~~~ 184 (409)
+|++++|+++.++.+++.++++++++++++++.+....+.... . .++.++... +........ ....
T Consensus 94 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 172 (542)
T PRK06155 94 LGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPL-DAPA 172 (542)
T ss_pred hCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhccc-CCCC
Confidence 9999999999999999999999999999999987766554321 1 222333211 000000000 0011
Q ss_pred cccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEE
Q 015325 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVV 264 (409)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 264 (409)
......++++++++|||||||.||+|+++|+++..........+ .+.+.+++++..|++|..++..++.++..|+++++
T Consensus 173 ~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~ 251 (542)
T PRK06155 173 PAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-EIGADDVLYTTLPLFHTNALNAFFQALLAGATYVL 251 (542)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-CCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEe
Confidence 12234568899999999999999999999999988777666666 68899999999999999999778999999999999
Q ss_pred ecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCccc
Q 015325 265 MQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (409)
Q Consensus 265 ~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 344 (409)
.+.+++..++..|+++++|.+.++|+++..|.+.........+++|.++.|| +++++.++|++.+ ++++++.||+||
T Consensus 252 ~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE 328 (542)
T PRK06155 252 EPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGSTE 328 (542)
T ss_pred eCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecccc
Confidence 9989999999999999999999999999999988766666677899887666 5789999999998 899999999999
Q ss_pred ccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecC---ccccccCCCCC
Q 015325 345 STAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP---TIMKGIFLPHF 408 (409)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~---~v~~gY~~~~~ 408 (409)
++..+... ......+++|.|+++++++|+| +++++++.|+.|||+++|+ +++.||++++.
T Consensus 329 ~~~~~~~~---~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~ 391 (542)
T PRK06155 329 TNFVIAVT---HGSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPE 391 (542)
T ss_pred cCccccCC---CCCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHH
Confidence 98765542 1234567899999999999999 7899999999999999998 79999998763
No 59
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-48 Score=383.31 Aligned_cols=359 Identities=31% Similarity=0.417 Sum_probs=308.5
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
+.++.+.|.+.++.+ |+++|+.+. +..+||+||+++++++|+.|.+ .|+++|++|+++++|+.+++++++||+
T Consensus 5 ~~~l~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~g~~~~~~V~l~~~~~~~~~~~~la~~ 77 (521)
T PRK06187 5 PLTIGRILRHGARKH----PDKEAVYFD--GRRTTYAELDERVNRLANALRA-LGVKKGDRVAVFDWNSHEYLEAYFAVP 77 (521)
T ss_pred cCCHHHHHHHHHHHC----CCceEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 389999999999999 999999998 7789999999999999999999 999999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-----C-eEEEeCC----------CcchhhhcccCC
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----H-RTILIDS----------PEFDSMTMSWNS 180 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~----------~~~~~~~~~~~~ 180 (409)
++|++++++++..+.+++..+++.+++++++++.+..+.+.... . .++..+. .++.++......
T Consensus 78 ~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 78 KIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASD 157 (521)
T ss_pred HcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCc
Confidence 99999999999999999999999999999999987766554321 1 2222221 122333222111
Q ss_pred cccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCC
Q 015325 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALME 260 (409)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~ 260 (409)
.........+++++++|||||||.||+|.+||+++..........+ +..++|++++..|++|.+++...+.++..|+
T Consensus 158 --~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (521)
T PRK06187 158 --TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-KLSRDDVYLVIVPMFHVHAWGLPYLALMAGA 234 (521)
T ss_pred --cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-CCCCCCEEEEeCCchHHhhHHHHHHHHHhCC
Confidence 1222345668899999999999999999999999998888777777 7899999999999999999866666999999
Q ss_pred eEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceeccc
Q 015325 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (409)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 340 (409)
++++.+.+++..+++.++++++|.+.++|+++..+..........+++||.+++||++++.++.+.|.+.| ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 99999888999999999999999999999999999998776667789999999999999999999999999 99999999
Q ss_pred CcccccceecccCCCCC----CCCCCccccccCCceEEEecCCCCCCCCC--CCcceEEEecCccccccCCCC
Q 015325 341 GLTESTAGVFRTVGPDE----CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 341 G~tE~~~~~~~~~~~~~----~~~~~s~G~p~~~~~v~i~d~~~g~~~~~--g~~Gei~v~g~~v~~gY~~~~ 407 (409)
|+||+++.+........ .....++|+|++++.++|+| +++++++. |+.|||+++|++++.||++++
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~ 385 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRP 385 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCH
Confidence 99999876655322111 13568899999999999999 77899999 999999999999999999874
No 60
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-48 Score=382.72 Aligned_cols=363 Identities=22% Similarity=0.285 Sum_probs=290.6
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
-++.+.|...+.++ |+++|+++.++.+++||+||.++++++|+.|.+ .|+++||+|+++++|+.+++++++||++
T Consensus 16 ~~l~~~l~~~a~~~----p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 90 (534)
T PRK05852 16 PRIADLVEVAATRL----PEAPALVVTADRIAISYRDLARLVDDLAGQLTR-SGLLPGDRVALRMGSNAEFVVALLAASR 90 (534)
T ss_pred ccHHHHHHHHHHhC----CCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 67999999999888 999999986545689999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC---Ce-EEEeCCCc------chhhhcc-cCCcccccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK---HR-TILIDSPE------FDSMTMS-WNSKHELDR 186 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---~~-~~~~~~~~------~~~~~~~-~~~~~~~~~ 186 (409)
+|++++++++.++.+++.++++.++++++|++........... .. .+.+.... +...... .........
T Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (534)
T PRK05852 91 ADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATST 170 (534)
T ss_pred cCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCccccc
Confidence 9999999999999999999999999999998764332111100 00 11111000 0000000 000000011
Q ss_pred cccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEe
Q 015325 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVM 265 (409)
Q Consensus 187 ~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~ 265 (409)
.....++.++++|||||||.||+|.++|+++...+......+ .+...|++++..|++|.+++ ..++.++..|+++++.
T Consensus 171 ~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 249 (534)
T PRK05852 171 PEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLP 249 (534)
T ss_pred cCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeC
Confidence 112246789999999999999999999999998888877777 68899999999999999998 6688889999998886
Q ss_pred c--CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCC--CCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccC
Q 015325 266 Q--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (409)
Q Consensus 266 ~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~--~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 341 (409)
. .+++..+++.|+++++|.+.++|+++..+.+..... ...++++|.+.++|++++++++++|++.| +.++++.||
T Consensus 250 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG 328 (534)
T PRK05852 250 ARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFG 328 (534)
T ss_pred CCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccC
Confidence 4 478999999999999999999999999998865432 33467899999999999999999999999 899999999
Q ss_pred cccccceecccCCCC---CCCCCCccccc--cCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 342 LTESTAGVFRTVGPD---ECRRWGSTGRL--SAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 342 ~tE~~~~~~~~~~~~---~~~~~~s~G~p--~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+||++..++...... ......++|.+ .+|++++|+| ++|+++++|+.|||+|+|+.++.|||+++.
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~ 399 (534)
T PRK05852 329 MTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPT 399 (534)
T ss_pred ccccchhhhcCCccccccccCcccccccCCCCCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcc
Confidence 999987655422110 01111234444 7999999999 789999999999999999999999999875
No 61
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-48 Score=457.84 Aligned_cols=356 Identities=20% Similarity=0.232 Sum_probs=307.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.++|.+.++++ |+++|++++ ++++||+||.++++++|+.|++ .|+++|++|+++++|+.+++++++||++
T Consensus 511 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~-~gv~~g~~V~l~~~~s~~~i~~~la~~~ 583 (5163)
T PRK12316 511 RGVHRLFEEQVERT----PEAPALAFG--EETLDYAELNRRANRLAHALIE-RGVGPDVLVGVAMERSIEMVVALLAILK 583 (5163)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 67999999999999 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-CCeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
+|++++|++|.++.+++.++++.+++++++++......+... ...++.++... ........ ........++++++
T Consensus 584 aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~a~ 659 (5163)
T PRK12316 584 AGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPA--AWLEGYSE--ENPGTELNPENLAY 659 (5163)
T ss_pred cCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcc--hhhccCCC--CCCCCCCCCCCeEE
Confidence 999999999999999999999999999999988665544322 23344333211 11111110 12223456789999
Q ss_pred EEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec---CCCHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~~~~~ 273 (409)
|+|||||||.||||+++|+++.+.+.+....+ ++..+++++...|++|..+++.++.++..|+++++.+ .+++..+
T Consensus 660 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~ 738 (5163)
T PRK12316 660 VIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKL 738 (5163)
T ss_pred EEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHH
Confidence 99999999999999999999999999888888 7889999999999999999999999999999999985 3789999
Q ss_pred HHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccC
Q 015325 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (409)
Q Consensus 274 ~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (409)
++.++++++|++.++|++++.|++... ...+++||.+++|||++++++.++|.+.+++++++|.||+||++..++...
T Consensus 739 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 816 (5163)
T PRK12316 739 VELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWT 816 (5163)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEe
Confidence 999999999999999999999987543 235789999999999999999999999888999999999999986544332
Q ss_pred CCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 354 ~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.........++|+|++|++++|+| ++++++|.|+.|||+|+|++++.||+|+|.
T Consensus 817 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~ 870 (5163)
T PRK12316 817 CVEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPG 870 (5163)
T ss_pred cccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChh
Confidence 223334557899999999999999 789999999999999999999999999874
No 62
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5.7e-48 Score=383.21 Aligned_cols=360 Identities=26% Similarity=0.387 Sum_probs=290.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhcc-CCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT-RLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~-gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
.++.+.|...+.++ |+++|+++. ++.+||.||.++++++|+.|.+ . |+++||+|+++++|+++++++++||+
T Consensus 24 ~~~~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~gi~~gd~V~i~~~n~~e~~~~~la~~ 96 (562)
T PRK12492 24 KSVVEVFERSCKKF----ADRPAFSNL--GVTLSYAELERHSAAFAAYLQQ-HTDLVPGDRIAVQMPNVLQYPIAVFGAL 96 (562)
T ss_pred CcHHHHHHHHHHhC----CCCeeEecC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 58999999999888 999999987 7899999999999999999997 5 99999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCeEEEe-C------------------------
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILI-D------------------------ 167 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~-~------------------------ 167 (409)
++|++++++++..+.+++.+++++++++++++++.....+... ....... .
T Consensus 97 ~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK12492 97 RAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMV 176 (562)
T ss_pred HcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccc
Confidence 9999999999999999999999999999999976543322210 0010000 0
Q ss_pred -------CCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC--------CC
Q 015325 168 -------SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK--------RV 232 (409)
Q Consensus 168 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~--------~~ 232 (409)
...|++....... ..........+++++|+|||||||.||+|+++|+++...+......+.. ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 177 PAYHLPQAVPFKQALRQGRG-LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred cccCCcccccHHHHHhccCC-CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 0001111111000 0111123456789999999999999999999999997766554443310 12
Q ss_pred C-CCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCc
Q 015325 233 S-PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSL 309 (409)
Q Consensus 233 ~-~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~L 309 (409)
. .++++..+|++|.+++ ..++..+..|+++++.. ..++..++..++++++|++.++|+++..+.+.......+++++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 335 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSAL 335 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccce
Confidence 2 3577899999999998 66777788888877664 4689999999999999999999999999998776566678899
Q ss_pred ceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCc
Q 015325 310 ETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (409)
Q Consensus 310 r~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~ 389 (409)
|.+++||+++++.+.++|++.+ ++++++.||+||++..++... .......+++|+|+++++++|+| ++++++++|+.
T Consensus 336 r~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~ 412 (562)
T PRK12492 336 KLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNP-YGELARLGTVGIPVPGTALKVID-DDGNELPLGER 412 (562)
T ss_pred eEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecC-CcccccCCccceecCCCEEEEEC-CCCCCCCCCCc
Confidence 9999999999999999999988 899999999999987665422 12233457899999999999999 78999999999
Q ss_pred ceEEEecCccccccCCCCC
Q 015325 390 GELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 390 Gei~v~g~~v~~gY~~~~~ 408 (409)
|||+|+|+.++.|||+++.
T Consensus 413 Gel~v~g~~~~~gY~~~~~ 431 (562)
T PRK12492 413 GELCIKGPQVMKGYWQQPE 431 (562)
T ss_pred eEEEEeCCccccccccCch
Confidence 9999999999999999874
No 63
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1e-48 Score=451.41 Aligned_cols=357 Identities=20% Similarity=0.266 Sum_probs=305.4
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.++++ |+++|++++ ++.+||+||.++++++|+.|++ .|+++|++|+++++++++++++++||++
T Consensus 1574 ~~~~~~~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~~~~V~l~~~~s~~~vv~~lavlk 1646 (3956)
T PRK12467 1574 RLVHQLIEDQAAAT----PEAVALVFG--EQELTYGELNRRANRLAHRLIA-LGVGPEVLVGIAVERSLEMVVGLLAILK 1646 (3956)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEccCCHHHHHHHHHhhc
Confidence 57999999999999 999999998 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-CCeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
+|++++|++|.++.+++.++++++++++++++......+... ...++.++... ........ ........+++++|
T Consensus 1647 aG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~ay 1722 (3956)
T PRK12467 1647 AGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQED--DWLEGYSD--SNPAVNLAPQNLAY 1722 (3956)
T ss_pred cCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEecccc--chhccCCC--CCCCCCCCCcCcEE
Confidence 999999999999999999999999999999987765544321 22333333211 11111110 11223456789999
Q ss_pred EEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC---CCHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMM 273 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~~~~ 273 (409)
|+|||||||.||||+++|+++.+.+.+....+ ++...|+++...|++|..+++.++.++..|+++++.+. .++..+
T Consensus 1723 iiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l 1801 (3956)
T PRK12467 1723 VIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-QLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQL 1801 (3956)
T ss_pred EEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-CCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHH
Confidence 99999999999999999999999998888888 68899999999999999999999999999999999863 579999
Q ss_pred HHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccC
Q 015325 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (409)
Q Consensus 274 ~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (409)
++.|+++++|++.++|+++..|..... ....+++||.+++|||++++++.++|.+.+++.+++|.||+||++..++...
T Consensus 1802 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~ 1880 (3956)
T PRK12467 1802 IQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWT 1880 (3956)
T ss_pred HHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEe
Confidence 999999999999999999999987422 2345789999999999999999999999998889999999999987665432
Q ss_pred CC---CCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 354 GP---DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 354 ~~---~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.. .......++|+|+++++++|+| ++++++|.|..|||+|+|+++++||+|+|.
T Consensus 1881 ~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~ 1937 (3956)
T PRK12467 1881 CRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPA 1937 (3956)
T ss_pred ccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChh
Confidence 21 1122356899999999999999 899999999999999999999999999874
No 64
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-48 Score=388.79 Aligned_cols=356 Identities=21% Similarity=0.310 Sum_probs=280.2
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCC-------CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
+|+.+++.++++++ |+++|+++.+ ....+||+||.++++++|++|.+ . +++||+|+++++|++++++
T Consensus 34 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 34 TTLISLIERNIANV----GDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred CcHHHHHHHHHHhC----CCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChhHHH
Confidence 78999998888888 9999998631 12489999999999999999998 5 9999999999999999999
Q ss_pred HHHHHHHhCCeEccC-CCCCC--HHHHHHHHhhcCCeEEEEcCchHHHHhhc----C----CeEEEeCCCcchhhhcccC
Q 015325 111 LYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAKL----K----HRTILIDSPEFDSMTMSWN 179 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~ 179 (409)
+++||+++|++++|+ ++..+ .+++.+++++++++++|++.+....+... . ..++.++. +. ....
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~---~~~~ 182 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDA--IP---DSAG 182 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecc--cc---cccc
Confidence 999999999999999 57766 78999999999999999987665543221 1 12222221 10 0000
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC-CCCCCEEEEeCchhhHHhHHHHHHHHHh
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGLFFCFRAAAL 258 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~l~~ 258 (409)
. ........++++++|+|||||||.||||++||+++...+......+ . +.++++.++.+|++|.+|+...+.++..
T Consensus 183 ~--~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~ 259 (612)
T PRK12476 183 E--SFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-DLLDRNTHGVSWLPLYHDMGLSMIGFPAVY 259 (612)
T ss_pred c--cccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-ccCCCCceEEEeCCcccccchHHHHHHHhc
Confidence 0 1111234568999999999999999999999999987766655555 4 6788999999999999999655666666
Q ss_pred CCeEEEecC--C--CHHHHHHHHH--HhcceeEeechHHHHHHHhCCC----CCCCCCCCcceeeecCCCCCHHHHHHHH
Q 015325 259 METAVVMQR--F--DLKMMLKAVE--EFRVTHAAVTPPIVVAMSKGGS----TDGYDLSSLETVACGAAPLGKDTIMAFA 328 (409)
Q Consensus 259 G~~~v~~~~--~--~~~~~~~~i~--~~~~t~l~~~p~~l~~l~~~~~----~~~~~l~~Lr~v~~~G~~~~~~~~~~~~ 328 (409)
|+++++... + ++..+++.++ ++++|.+.++|+++..++.... ....++++|| +++||+++++++.++|+
T Consensus 260 gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~ 338 (612)
T PRK12476 260 GGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFN 338 (612)
T ss_pred CCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHH
Confidence 666666542 3 8899999995 5899999999999887776421 1344678999 99999999999999999
Q ss_pred HhCC-----CCceecccCcccccceecccCCCC-------------------------CCCCCCccccccCCceEEEecC
Q 015325 329 SKFP-----KVVLVQAYGLTESTAGVFRTVGPD-------------------------ECRRWGSTGRLSAGLEAKIVDP 378 (409)
Q Consensus 329 ~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~-------------------------~~~~~~s~G~p~~~~~v~i~d~ 378 (409)
+.|+ ...+++.||+||++..++...... .....+++|+|++|++++|+|+
T Consensus 339 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~ 418 (612)
T PRK12476 339 KAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDP 418 (612)
T ss_pred HHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeC
Confidence 9872 345999999999876544321110 0012357899999999999995
Q ss_pred CCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 379 ETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 379 ~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++|++++.|+.|||+++|++++.||||+|.
T Consensus 419 ~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~ 448 (612)
T PRK12476 419 DTGAELPDGEVGEIWLHGDNIGRGYWGRPE 448 (612)
T ss_pred CCCcCCCCCCEEEEEEcCCcccccccCChH
Confidence 559999999999999999999999999874
No 65
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.3e-48 Score=384.60 Aligned_cols=357 Identities=17% Similarity=0.194 Sum_probs=274.6
Q ss_pred CC-HHHHHhhccCCCCCCCCCCcEEEeCCCC--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 38 IS-AVDYVSSLRATLPWRDDDTVALINSVTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 38 ~~-~~~~l~~~~~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
|| +.+.|.+.+.++ |+++|+++.+.+ +++||+||.++++++|+.|++ . ++|++|+++++|+++++++++|
T Consensus 1 ~~~~~~~l~~~~~~~----~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-~--~~g~~V~l~~~~~~e~~~~~la 73 (525)
T PRK05851 1 MNELAAALSDAMTAS----GRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-R--DRPGAVGLVGEPTVELVAAIQG 73 (525)
T ss_pred CchHHHHHHHHhcCC----CCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-c--CCCCeEEEEcCCCHHHHHHHHH
Confidence 45 788898998888 999999987433 789999999999999999998 6 8999999999999999999999
Q ss_pred HHHhCCeEccCCCC-------CCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCccccccc
Q 015325 115 LLSLGVIISPANPV-------NTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRA 187 (409)
Q Consensus 115 ~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (409)
|+++|+++++++.. ...+++.++++.++++++|++.+....+......+. +. ++........ .....
T Consensus 74 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~---~~~~~ 147 (525)
T PRK05851 74 AWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSVT-VH--DLATAAHTNR---SASLT 147 (525)
T ss_pred HHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcccc-cc--cccccccccc---cccCC
Confidence 99999986544321 123455677899999999998776554432211111 11 1111100000 00111
Q ss_pred ccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCC-CCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV-SPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 188 ~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~-~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
...++++++|+|||||||.||||++||+++...+......+ +.. .+|++++..|++|.+++..++.++..|+++++.+
T Consensus 148 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 148 PPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 24568999999999999999999999999998888877777 566 8999999999999999988899999999999986
Q ss_pred C--C--CHHHHHHHHHHhcceeEeechHHHHHHHhCCC-CCCCCCCCcceeeecCCCCCHHHHHHHHHh---C--CCCce
Q 015325 267 R--F--DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS-TDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PKVVL 336 (409)
Q Consensus 267 ~--~--~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~-~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~---~--~~~~i 336 (409)
. + ++..+++.++++++|++...|.++..+.+... ....++++||.+++||+++++++.++|.+. + +...+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~ 306 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAA 306 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhc
Confidence 2 3 67889999999999988655554555443221 223457899999999999999999999875 3 22459
Q ss_pred ecccCcccccceecccCCCC-------------CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCcccccc
Q 015325 337 VQAYGLTESTAGVFRTVGPD-------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGI 403 (409)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~-------------~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY 403 (409)
++.||+||++..++...... .....+++|+|++|++++|+|++.+.+++.|+.|||+++|++++.||
T Consensus 307 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY 386 (525)
T PRK05851 307 APSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGY 386 (525)
T ss_pred ccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhcc
Confidence 99999999976554321100 11234689999999999999955556799999999999999999999
Q ss_pred CCCCC
Q 015325 404 FLPHF 408 (409)
Q Consensus 404 ~~~~~ 408 (409)
|+++.
T Consensus 387 ~~~~~ 391 (525)
T PRK05851 387 LGQAP 391 (525)
T ss_pred ccCCc
Confidence 99863
No 66
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=4.6e-48 Score=379.36 Aligned_cols=355 Identities=19% Similarity=0.267 Sum_probs=299.1
Q ss_pred CHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHh
Q 015325 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (409)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~ 118 (409)
|+.+.|...+..+ |+++|+.+. +.++||+||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||+++
T Consensus 1 ~~~~~l~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 73 (502)
T TIGR01734 1 KLIEAIQAFAETY----PQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQK-RILPKKSPIIVYGHMEPHMLVAFLGSIKS 73 (502)
T ss_pred CHHHHHHHHHHHC----CCceEEEcC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHh
Confidence 4678888888888 999999887 7899999999999999999999 99999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEE
Q 015325 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIM 198 (409)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 198 (409)
|++++|+++.++.+++.++++..++++++++.+....... ...+.++. .......... ........+++.++++
T Consensus 74 G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~il 147 (502)
T TIGR01734 74 GHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--TQIITLSA--LEQAETSGGP--VSFDHAVKGDDNYYII 147 (502)
T ss_pred CCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--CceEEchH--hhhhhhhcCC--ccccccCCCCCeEEEE
Confidence 9999999999999999999999999999998765433321 12222211 1111111110 1112234578899999
Q ss_pred cCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC---CCHHHHHH
Q 015325 199 YSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMMLK 275 (409)
Q Consensus 199 ~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~~ 275 (409)
|||||||.||+|.++|+++..........+ .....++++...|++|..++..++.++..|+++++.+. .++..+++
T Consensus 148 ~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 226 (502)
T TIGR01734 148 YTSGSTGNPKGVQISHDNLVSFTNWMLADF-PLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFE 226 (502)
T ss_pred ECCCCCCCCCEEEEecHHHHHHHHHHHHhC-CCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHH
Confidence 999999999999999999998888877777 68889999999999999999889999999999999865 58899999
Q ss_pred HHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCC
Q 015325 276 AVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP 355 (409)
Q Consensus 276 ~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~ 355 (409)
.+.++++|.+.++|++++.++.........++++|.++++|++++.++.+++.+.++++++++.||+||+++.++.....
T Consensus 227 ~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 306 (502)
T TIGR01734 227 ELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKIT 306 (502)
T ss_pred HHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEcc
Confidence 99999999999999999888766544555678999999999999999999999999999999999999987655432211
Q ss_pred ---CCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 356 ---DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 356 ---~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.......++|+|+++++++|+| ++++++++|+.|||+++|++++.||++++.
T Consensus 307 ~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~ 361 (502)
T TIGR01734 307 QEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPE 361 (502)
T ss_pred ccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcc
Confidence 1123345799999999999999 789999999999999999999999998764
No 67
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.1e-48 Score=415.54 Aligned_cols=363 Identities=24% Similarity=0.308 Sum_probs=302.4
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
..++.+.+.+.++++ |+++|+++. .++++||+||.++++++|+.|++ ++++||+|+++++|+++++++++||+
T Consensus 614 ~~~l~~~~~~~a~~~----p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~la~~ 686 (1146)
T PRK08633 614 LPPLAEAWIDTAKRN----WSRLAVADS-TGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANLALL 686 (1146)
T ss_pred CCCHHHHHHHHHHhc----CCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHHHHH
Confidence 367888888888888 999999974 35799999999999999999987 48999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhh------c--CCeEEEeCCC-----c---chhhhcccCC
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L--KHRTILIDSP-----E---FDSMTMSWNS 180 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------~--~~~~~~~~~~-----~---~~~~~~~~~~ 180 (409)
++|++++|+++..+.+++.++++++++++++++++....+.+ . ..+++..+.. . +.........
T Consensus 687 ~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1146)
T PRK08633 687 LAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLL 766 (1146)
T ss_pred HcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccC
Confidence 999999999999999999999999999999998876665542 1 1122222210 0 1100000000
Q ss_pred cc----cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHH
Q 015325 181 KH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRA 255 (409)
Q Consensus 181 ~~----~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~ 255 (409)
.. ........++|+++++|||||||.||+|.+||+++..........+ ...++|++++.+|++|.+++ ..++.+
T Consensus 767 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~ 845 (1146)
T PRK08633 767 PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-NLRNDDVILSSLPFFHSFGLTVTLWLP 845 (1146)
T ss_pred CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-CCCCCCEEEEcCcHHHHHhHHHHHHHH
Confidence 00 0001344678999999999999999999999999998888877777 68889999999999999999 558899
Q ss_pred HHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCC
Q 015325 256 AALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV 334 (409)
Q Consensus 256 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~ 334 (409)
+..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++||+++++++.++|++.+ ++
T Consensus 846 l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~ 924 (1146)
T PRK08633 846 LLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GI 924 (1146)
T ss_pred HHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CC
Confidence 99999999876 47899999999999999999999999999987655566789999999999999999999999999 89
Q ss_pred ceecccCcccccceecccCCCC--------CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCC
Q 015325 335 VLVQAYGLTESTAGVFRTVGPD--------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLP 406 (409)
Q Consensus 335 ~i~~~yG~tE~~~~~~~~~~~~--------~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~ 406 (409)
++++.||+||+++.++...... ...+.+++|+|+||++++|+|+++++++++|+.|||+++|++++.|||++
T Consensus 925 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 925 RILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred CeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCC
Confidence 9999999999987665422111 12346789999999999999988999999999999999999999999998
Q ss_pred CC
Q 015325 407 HF 408 (409)
Q Consensus 407 ~~ 408 (409)
|.
T Consensus 1005 ~~ 1006 (1146)
T PRK08633 1005 PE 1006 (1146)
T ss_pred cc
Confidence 75
No 68
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.1e-48 Score=394.62 Aligned_cols=352 Identities=18% Similarity=0.249 Sum_probs=284.7
Q ss_pred CCCHHHHHhhccCCCCCCCCC-CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDD-TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
..|+.+.|.+.++++ |+ ++|+.+. ..+.+||+||.++++++|++|++ . +++||+|+++++|++++++++|||
T Consensus 203 ~~t~~~~l~~~~~~~----p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~Val~~~n~~e~~~~~lA~ 275 (718)
T PRK08043 203 RETLYEALLSAQYRY----GAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEK-Y-SVEGERIGLMLPNATISAAVIFGA 275 (718)
T ss_pred CCCHHHHHHHHHHHh----CCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHH-h-cCCCceEEEEcCCcHHHHHHHHHH
Confidence 478899999999888 87 5788753 23789999999999999999998 6 599999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHh--hc-----CCeEEEeCCC-c---chhh-hc-ccCCcc
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA--KL-----KHRTILIDSP-E---FDSM-TM-SWNSKH 182 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~-----~~~~~~~~~~-~---~~~~-~~-~~~~~~ 182 (409)
+++|++++|+++.++.+++.+++++++++++|++.+...... .. ....+.++.. . +... .. ......
T Consensus 276 ~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 355 (718)
T PRK08043 276 SLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMP 355 (718)
T ss_pred HHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCC
Confidence 999999999999999999999999999999999876543211 00 1122222210 0 0000 00 000000
Q ss_pred cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCe
Q 015325 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (409)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~ 261 (409)
........++|+++++|||||||.||||++||+++...+......+ ++..+|++++.+|++|.+++ ..++.++..|++
T Consensus 356 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~ 434 (718)
T PRK08043 356 RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAE 434 (718)
T ss_pred ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCE
Confidence 0011234568999999999999999999999999998887777766 68899999999999999998 668899999999
Q ss_pred EEEecC-CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceeccc
Q 015325 262 AVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (409)
Q Consensus 262 ~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 340 (409)
+++.+. +++..+++.++++++|++.++|+++..+.+.. ...++++||.+++||+++++++.++|++.| ++++++.|
T Consensus 435 vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~Y 511 (718)
T PRK08043 435 VFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGY 511 (718)
T ss_pred EEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeeccc
Confidence 998874 57788899999999999999999998887642 234678999999999999999999999998 89999999
Q ss_pred CcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCC
Q 015325 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLP 406 (409)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~ 406 (409)
|+||++..++.. .......+++|+|+||++++|+| ++|. ++.|||+++|++++.|||++
T Consensus 512 G~TE~~~~~~~~--~~~~~~~~svG~p~pg~~~~i~d-~~~~----~~~Gel~v~g~~v~~GY~~~ 570 (718)
T PRK08043 512 GVTECAPVVSIN--VPMAAKPGTVGRILPGMDARLLS-VPGI----EQGGRLQLKGPNIMNGYLRV 570 (718)
T ss_pred CcccccceEEec--CCcccCCCCCCCcCCCCeeEEec-CCCC----CCceEEEEecCCccccccCC
Confidence 999998766542 22334678999999999999999 5543 56799999999999999984
No 69
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-48 Score=379.21 Aligned_cols=362 Identities=25% Similarity=0.355 Sum_probs=296.1
Q ss_pred CCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
.++|+.++|...+.++ |+++|++++ +..+||.||.++++++|+.|++ .|+++|++|+++++|+.+++++++||
T Consensus 5 ~~~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~ 77 (528)
T PRK07470 5 RVMNLAHFLRQAARRF----PDRIALVWG--DRSWTWREIDARVDALAAALAA-RGVRKGDRILVHSRNCNQMFESMFAA 77 (528)
T ss_pred cCCCHHHHHHHHHHHC----CCceEEEEC--CccccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3489999999999988 999999987 7899999999999999999999 99999999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----C-CeEEEeCC----CcchhhhcccCCccccc
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDS----PEFDSMTMSWNSKHELD 185 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~-~~~~~~~~----~~~~~~~~~~~~~~~~~ 185 (409)
+++|++++++++..+.+++.++++.+++++++++++........ . ...+.+.. ..+.++....... ...
T Consensus 78 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (528)
T PRK07470 78 FRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGA-RVA 156 (528)
T ss_pred HhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCC-CCC
Confidence 99999999999999999999999999999999998765443321 1 12222221 1233332221110 112
Q ss_pred ccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc-cCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEE
Q 015325 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVV 264 (409)
Q Consensus 186 ~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 264 (409)
.....++++++++|||||||.||+|.++|+++...+..... ...+....|+++...|++|.+++..++ .+..|++.++
T Consensus 157 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~ 235 (528)
T PRK07470 157 NAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVL 235 (528)
T ss_pred cccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEE
Confidence 23346688999999999999999999999998765443222 222457889999999999999986544 5777888777
Q ss_pred ec--CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCc
Q 015325 265 MQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (409)
Q Consensus 265 ~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (409)
.+ .+++..+++.|+++++|++.++|++++.+.+.+......++++|.+++||+++++.+.+++.+.+ +..+++.||+
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~ 314 (528)
T PRK07470 236 LPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGL 314 (528)
T ss_pred ecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCC
Confidence 64 47899999999999999999999999999987765566788999999999999999999999988 7889999999
Q ss_pred ccccceecccCCC------CCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 343 TESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 343 tE~~~~~~~~~~~------~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
||+++.++..... ......+++|+|+++++++|+| ++|++++.|+.|||+++|+.++.|||+++.
T Consensus 315 TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~ 385 (528)
T PRK07470 315 GEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPE 385 (528)
T ss_pred cccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHH
Confidence 9998765432110 0123457899999999999999 789999999999999999999999998753
No 70
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.7e-47 Score=384.59 Aligned_cols=360 Identities=19% Similarity=0.167 Sum_probs=279.9
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCC---CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~ 111 (409)
+..+|+++.+.++ . ++++|++..+. .+++||+||.+++.++|+.|++ .|+++||+|+++++|+++++++
T Consensus 84 ~~~~n~~~~~~~~---~----~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~~n~~e~~~~ 155 (652)
T TIGR01217 84 GARLNYAENLLRA---A----GTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-LGVRPGDRVSGYLPNIPQAVVA 155 (652)
T ss_pred CCeeeHHHHHhcc---C----CCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 5568999988874 3 57788876422 2589999999999999999999 9999999999999999999999
Q ss_pred HHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH---------HHHh----hcC-C-eEEEeCC--------
Q 015325 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA----KLK-H-RTILIDS-------- 168 (409)
Q Consensus 112 ~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~~-~-~~~~~~~-------- 168 (409)
++||+++|++++|+++.++.+++.+++++++++++|+++... ..+. .+. . .++.++.
T Consensus 156 ~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (652)
T TIGR01217 156 MLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEA 235 (652)
T ss_pred HHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccc
Confidence 999999999999999999999999999999999999976431 1111 111 1 1222211
Q ss_pred ------CcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHH-HHHhhccCCCCCCCCEEEEeC
Q 015325 169 ------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA-VASSFASSPKRVSPAVMLFTM 241 (409)
Q Consensus 169 ------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~~d~~l~~~ 241 (409)
..++++....... .........+++++|+|||||||.||||+++|++++.. .......+ .+.++|++++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~ 313 (652)
T TIGR01217 236 PKIDGALDLEDFTAAAQAA-ELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-DLGPGDRLFYYT 313 (652)
T ss_pred ccccCcccHHHHHhcccCC-CCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-CCCCCcEEEEeC
Confidence 1123332221100 11122345689999999999999999999999986543 33444445 678899999999
Q ss_pred chhhHHhHHHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceeeec
Q 015325 242 PYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACG 315 (409)
Q Consensus 242 p~~~~~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~ 315 (409)
|+.|..+. .++.++..|+++++.++ .++..++++++++++|++..+|.++..+.+... ....++++||.+++|
T Consensus 314 ~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~g 392 (652)
T TIGR01217 314 TTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVAST 392 (652)
T ss_pred CcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEee
Confidence 99997543 45689999999999853 378999999999999999888888777765421 234578999999999
Q ss_pred CCCCCHHHHHHHHHhCC-CCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEE
Q 015325 316 AAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSI 394 (409)
Q Consensus 316 G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v 394 (409)
|+++++++.+++.+.++ +..+.+.||+||+++.... .........+++|.|.+|++++|+| ++|+++ +|+.|||++
T Consensus 393 Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~-~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v 469 (652)
T TIGR01217 393 GSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAG-ANPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVC 469 (652)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccC-CCCCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEE
Confidence 99999999999999883 4567889999997543332 1222234467899999999999999 889998 599999999
Q ss_pred ecC--ccccccCCCCC
Q 015325 395 RGP--TIMKGIFLPHF 408 (409)
Q Consensus 395 ~g~--~v~~gY~~~~~ 408 (409)
+|| +++.|||+++.
T Consensus 470 ~gp~p~~~~gy~~~~~ 485 (652)
T TIGR01217 470 TNPMPSMPIRFWNDPD 485 (652)
T ss_pred ecCCCccccceeCCCc
Confidence 996 68999999875
No 71
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-47 Score=380.11 Aligned_cols=364 Identities=24% Similarity=0.307 Sum_probs=299.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.++++ |+++|+++.+.++.+||+||.++++++|++|.+ .|+++|++|+++++|++++++++|||++
T Consensus 18 ~~l~~~l~~~~~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 18 QTIGDAFDATVARF----PDREALVVRHQALRYTWRQLADAVDRLARGLLA-LGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred CcHHHHHHHHHHHC----CCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999998 999999986557899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH-----HHHh----hc--------------CC-eEEEeCC-----
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA----KL--------------KH-RTILIDS----- 168 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~----~~--------------~~-~~~~~~~----- 168 (409)
+|++++++++..+.+++.+++++++++++++++... ..+. .+ .. ..+....
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPG 172 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCcc
Confidence 999999999999999999999999999999876421 1111 00 00 0111111
Q ss_pred -CcchhhhcccCCc----ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCch
Q 015325 169 -PEFDSMTMSWNSK----HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (409)
Q Consensus 169 -~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~ 243 (409)
..|++........ .........++++++++|||||||.||+|.++|+++...+......+ +...+|++++..|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 251 (558)
T PRK12583 173 FLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-GLTEHDRLCVPVPL 251 (558)
T ss_pred ccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh-CCCCCCeEEEecCc
Confidence 0122221111100 00011233568899999999999999999999999988888777777 68889999999999
Q ss_pred hhHHhH-HHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCH
Q 015325 244 FHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (409)
Q Consensus 244 ~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~ 321 (409)
+|.+|. ..++.++..|+++++.. .+++..++..++++++|++.++|+++..++........++++||.+++||+++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~ 331 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPI 331 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCH
Confidence 999998 77888999999998754 5789999999999999999999999998887766556678999999999999999
Q ss_pred HHHHHHHHhCCCCceecccCcccccceecccCC-CCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccc
Q 015325 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG-PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (409)
Q Consensus 322 ~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~ 400 (409)
++.+++.+.+++..+++.||+||++...+.... ........++|+|++++.++|+|+ ++++++.|+.|||+++|+.++
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDP-DGATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECC-CCCCCCCCCeeEEEEEeCccc
Confidence 999999999977789999999999876654221 112234678999999999999995 599999999999999999999
Q ss_pred cccCCCCC
Q 015325 401 KGIFLPHF 408 (409)
Q Consensus 401 ~gY~~~~~ 408 (409)
.||++++.
T Consensus 411 ~gy~~~~~ 418 (558)
T PRK12583 411 KGYWNNPE 418 (558)
T ss_pred hhhcCChH
Confidence 99998863
No 72
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-47 Score=377.16 Aligned_cols=351 Identities=18% Similarity=0.167 Sum_probs=285.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
-++.+.|.+++ . |+++|+++. +..+||.||.++++++|..|.+ .|+ ++|++|+++++|+++++++++||+
T Consensus 3 ~~~~~~l~~~~--~----p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~-~g~~~~~~~V~i~~~n~~~~v~~~lA~~ 73 (540)
T PRK13388 3 DTIAQLLRDRA--G----DDTIAVRYG--DRTWTWREVLAEAAARAAALIA-LADPDRPLHVGVLLGNTPEMLFWLAAAA 73 (540)
T ss_pred hhHHHHHHhhc--c----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCcHHHHHHHHHH
Confidence 46777887654 4 899999987 7899999999999999999999 999 799999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc---CCeEEEeCCCcchhhhcccCCcccccccccCCCC
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (409)
++|++++|++|..+.+++.++++++++++++++++....+.+. ..+++..+...+.++...... ........+++
T Consensus 74 ~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 151 (540)
T PRK13388 74 LGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAAGA--LTPHREVDAMD 151 (540)
T ss_pred hCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccccC--cCCCCCCCCCC
Confidence 9999999999999999999999999999999988766555433 234444443334443322111 11112346789
Q ss_pred EEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHH
Q 015325 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKM 272 (409)
Q Consensus 194 ~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~ 272 (409)
+++++|||||||.||+|.++|+++..........+ +...+|+++..+|++|.+++ ..++.++..|+++++.+.+++..
T Consensus 152 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 230 (540)
T PRK13388 152 PFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-GLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASG 230 (540)
T ss_pred eEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-CCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHH
Confidence 99999999999999999999999988887777777 68899999999999999988 45567899999999988889999
Q ss_pred HHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceeccc
Q 015325 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (409)
Q Consensus 273 ~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (409)
+++.++++++|++..+|..+..++..+........++|.+ + |+++++...++|.+.+ +.++++.||+||++..++..
T Consensus 231 ~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~ 307 (540)
T PRK13388 231 FLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVRE 307 (540)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceecccccccccceeecC
Confidence 9999999999999999999999987654332233466643 3 6667888999999998 89999999999998665431
Q ss_pred CCCCCCCCCCccccccCCceEE-----------EecCCCCCCC-CCCCcceEEEe-cCccccccCCCCC
Q 015325 353 VGPDECRRWGSTGRLSAGLEAK-----------IVDPETGDSL-PPGKEGELSIR-GPTIMKGIFLPHF 408 (409)
Q Consensus 353 ~~~~~~~~~~s~G~p~~~~~v~-----------i~d~~~g~~~-~~g~~Gei~v~-g~~v~~gY~~~~~ 408 (409)
.....+++|+|++|+++. ++| ++|+++ ++|+.|||+++ |++++.|||++|.
T Consensus 308 ----~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~ 371 (540)
T PRK13388 308 ----PGTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPE 371 (540)
T ss_pred ----CCCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChH
Confidence 123467899999997753 455 566666 45679999998 9999999999864
No 73
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-47 Score=379.78 Aligned_cols=363 Identities=21% Similarity=0.330 Sum_probs=293.9
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
..+.++.+.|...++++ |+++|+++. +..+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++|
T Consensus 20 ~~~~~i~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la 92 (557)
T PRK07059 20 SQYPSLADLLEESFRQY----ADRPAFICM--GKAITYGELDELSRALAAWLQS-RGLAKGARVAIMMPNVLQYPVAIAA 92 (557)
T ss_pred CCCCCHHHHHHHHHHHc----CCCceEEEc--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHH
Confidence 33468999999999988 999999987 7899999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCeEE-EeCC---------------------
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTI-LIDS--------------------- 168 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~-~~~~--------------------- 168 (409)
|+++|++++|+++..+.+++.+++++++++++++++.....+.+. ....+ ....
T Consensus 93 ~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (557)
T PRK07059 93 VLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKM 172 (557)
T ss_pred HHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccccccccc
Confidence 999999999999999999999999999999999987655443321 11111 1000
Q ss_pred ---------CcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC---C---CCC
Q 015325 169 ---------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP---K---RVS 233 (409)
Q Consensus 169 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~---~---~~~ 233 (409)
..+++....... .........++++++++|||||||.||+|+++|++++..+......+. . ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (557)
T PRK07059 173 VPAWSLPGHVRFNDALAEGAR-QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPD 251 (557)
T ss_pred ccccCCCCcccHHHHhhccCC-CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCC
Confidence 001111111110 011123345789999999999999999999999999876544332220 1 123
Q ss_pred CCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcce
Q 015325 234 PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLET 311 (409)
Q Consensus 234 ~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~ 311 (409)
...+++..|++|.+++ ...+.++..|++.++.+. .++..+++.++++++|.+.++|.++..+.........+++++|.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 4578889999999887 567788888988777754 58899999999999999999999999999886655667889999
Q ss_pred eeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcce
Q 015325 312 VACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (409)
Q Consensus 312 v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Ge 391 (409)
++.||+++++.+.++|.+.+ ++++++.||+||++..++... ......++++|+|+++++++|+| ++|++++.|+.||
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Ge 408 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNP-VDATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGE 408 (557)
T ss_pred EEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCC-CCCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceE
Confidence 99999999999999999988 899999999999987655432 22234467899999999999999 8899999999999
Q ss_pred EEEecCccccccCCCCC
Q 015325 392 LSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 392 i~v~g~~v~~gY~~~~~ 408 (409)
|+++|++++.|||+++.
T Consensus 409 l~v~g~~~~~gY~~~~~ 425 (557)
T PRK07059 409 ICIRGPQVMAGYWNRPD 425 (557)
T ss_pred EEEeCCccchhhhcCHH
Confidence 99999999999998763
No 74
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-47 Score=374.06 Aligned_cols=339 Identities=23% Similarity=0.347 Sum_probs=281.0
Q ss_pred CCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
||++|+.+..++..+||.||.++++++|+.|++ .|+++|++|+++++|++++++++|||+++|++++|+++..+.+++.
T Consensus 9 p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~ 87 (488)
T PRK09088 9 PQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-RGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELD 87 (488)
T ss_pred CCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHH
Confidence 999999874447899999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccH
Q 015325 136 RQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHR 215 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~ 215 (409)
+++++++++++++++...... ...+ .++.+.................+++++++|||||||.||+|.+||+
T Consensus 88 ~~~~~~~~~~ii~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~ 158 (488)
T PRK09088 88 ALLQDAEPRLLLGDDAVAAGR----TDVE-----DLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSER 158 (488)
T ss_pred HHHHhCCCCEEEEcchhhccc----cccc-----chhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehH
Confidence 999999999999987543211 1111 1111111111000111223456789999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHH--HhcceeEeechHHH
Q 015325 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVE--EFRVTHAAVTPPIV 292 (409)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~--~~~~t~l~~~p~~l 292 (409)
++...+....... .....|++++.+|++|.+++ ..++.++..|+++++.+.+++..++..+. ++++|++.++|+++
T Consensus 159 ~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~ 237 (488)
T PRK09088 159 NLQQTAHNFGVLG-RVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMA 237 (488)
T ss_pred HHHHHHHHHHHhh-CCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHH
Confidence 9987777666555 57789999999999999998 66788899999999998889999999886 48999999999999
Q ss_pred HHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC-CCCCCCCCccccccCCc
Q 015325 293 VAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG-PDECRRWGSTGRLSAGL 371 (409)
Q Consensus 293 ~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~~~~s~G~p~~~~ 371 (409)
..+.+........+++||.+++||++++....+++.+. ++++++.||+||++........ .......+++|.|+|++
T Consensus 238 ~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 315 (488)
T PRK09088 238 QAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTV 315 (488)
T ss_pred HHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCCCCc
Confidence 99988765555567899999999999999999888865 8899999999999865432111 11123567899999999
Q ss_pred eEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 372 EAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 372 ~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+++|+| +++++++.|+.|||+|+|++++.||++++.
T Consensus 316 ~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~ 351 (488)
T PRK09088 316 QTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQ 351 (488)
T ss_pred EEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChh
Confidence 999999 789999999999999999999999999864
No 75
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-47 Score=378.58 Aligned_cols=382 Identities=24% Similarity=0.305 Sum_probs=303.4
Q ss_pred CCeeeecCCCCCCCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCE
Q 015325 18 ATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDT 97 (409)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~ 97 (409)
+.+.|....|...+. +....++.+.|.+.+..+ |+++|+.+. ++.+||.||.+++.++|+.|.+ .|+++|++
T Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~a~~~----p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~ 85 (567)
T PRK06178 14 QQAAWPAGIPREPEY-PHGERPLTEYLRAWARER----PQRPAIIFY--GHVITYAELDELSDRFAALLRQ-RGVGAGDR 85 (567)
T ss_pred HHhhCCcCCCCCCCC-CcCcccHHHHHHHHHHHC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCE
Confidence 344566445544332 244489999999999888 999999987 7899999999999999999999 99999999
Q ss_pred EEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCeE-EEeCCCc--
Q 015325 98 AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRT-ILIDSPE-- 170 (409)
Q Consensus 98 V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~-~~~~~~~-- 170 (409)
|+++++|+.+++++++||+++|++++|++|..+.+++.+++++++++++++++...+.+.+. .... +.....+
T Consensus 86 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~ 165 (567)
T PRK06178 86 VAVFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVL 165 (567)
T ss_pred EEEECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999998776554432 1111 1111000
Q ss_pred ---------------------chhhhcccCC-cccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC
Q 015325 171 ---------------------FDSMTMSWNS-KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS 228 (409)
Q Consensus 171 ---------------------~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~ 228 (409)
+.++...... ..........++++++++|||||||.||+|++||++++..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~ 245 (567)
T PRK06178 166 PAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA 245 (567)
T ss_pred ccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh
Confidence 0011110000 001111234568899999999999999999999999887655443332
Q ss_pred CCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCC
Q 015325 229 PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (409)
Q Consensus 229 ~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~ 307 (409)
......|++++.+|++|.+|+ ..++.++..|+++++.+++++..++..++++++|.+.++|..+..+.+.......+++
T Consensus 246 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~ 325 (567)
T PRK06178 246 VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLS 325 (567)
T ss_pred ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcc
Confidence 257889999999999999998 6788899999999999999999999999999999999999999999887655556677
Q ss_pred Ccceeee--cCCCCCHHHHHHHHHhCCCCcee-cccCcccccceecccCCCC-----CCCCCCccccccCCceEEEecCC
Q 015325 308 SLETVAC--GAAPLGKDTIMAFASKFPKVVLV-QAYGLTESTAGVFRTVGPD-----ECRRWGSTGRLSAGLEAKIVDPE 379 (409)
Q Consensus 308 ~Lr~v~~--~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~~~~~~~~~~~~-----~~~~~~s~G~p~~~~~v~i~d~~ 379 (409)
++|.+.. .|+.+++++.+.|++.+ +..++ +.||+||++...+...... ....++++|+|+||++++|+|++
T Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~ 404 (567)
T PRK06178 326 SLRQVRVVSFVKKLNPDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFE 404 (567)
T ss_pred hheeeeeccccccCCHHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCC
Confidence 8888654 45899999999999998 55555 4799999876543321111 12345679999999999999988
Q ss_pred CCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 380 TGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 380 ~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++++++.|+.|||+++|++++.|||+++.
T Consensus 405 ~~~~~~~g~~Gel~v~g~~v~~gY~~~~~ 433 (567)
T PRK06178 405 TGELLPLGAEGEIVVRTPSLLKGYWNKPE 433 (567)
T ss_pred CCCcCCCCCceEEEEECCcccccccCChh
Confidence 99999999999999999999999999863
No 76
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.4e-49 Score=344.16 Aligned_cols=361 Identities=23% Similarity=0.276 Sum_probs=307.5
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
++..++.+.|.++++++ ||++|++++ ++++||+||.++++++|..|++ .|+++||+|.+.+||..++++++||
T Consensus 25 W~d~~l~d~L~~~A~~~----pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~-lGi~~Gd~vlvQLpN~~ef~~~~FA 97 (542)
T COG1021 25 WQDRTLTDILTDHAARY----PDRIAVIDG--ERRLSYAELDQRADRLAAGLRR-LGIKPGDTVLVQLPNVAEFYITFFA 97 (542)
T ss_pred ccCCcHHHHHHHHHhhc----CCceEEecC--cccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCchHHHHHHHHH
Confidence 45589999999999999 999999998 7889999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH--------HHHh--hcCCeEEEeC-CCc-----chhhhccc
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV--------HKLA--KLKHRTILID-SPE-----FDSMTMSW 178 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--------~~~~--~~~~~~~~~~-~~~-----~~~~~~~~ 178 (409)
++++|+++|..=|.-...++.++.+...++.+|.+.... ..+. ...++.+.+. ..+ +..+....
T Consensus 98 LlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a 177 (542)
T COG1021 98 LLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPA 177 (542)
T ss_pred HHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCcc
Confidence 999999999999999999999999999999999875321 1111 1123444333 211 11111111
Q ss_pred CCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH--HHHHHHH
Q 015325 179 NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL--FFCFRAA 256 (409)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~--~~~~~~l 256 (409)
. ......+.++++++++..+.||||.||.|..+|+.+..+...-.+.+ ++++.++.++.+|..|-+-+ -+.+..+
T Consensus 178 ~--~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-~~~~~tvyL~~LP~AHNfplssPG~LGv~ 254 (542)
T COG1021 178 G--LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-GFDQQTVYLCALPAAHNFPLSSPGALGVF 254 (542)
T ss_pred c--cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-CcCccceEEEecccccCCCCCCcchhhee
Confidence 1 01223455678899999999999999999999999988888888888 79999999999999998888 4789999
Q ss_pred HhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCce
Q 015325 257 ALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (409)
Q Consensus 257 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i 336 (409)
++|+++|+.+..+|+....+|+++++|+..++|.+...|+...+....+++|||++=+||+.+++.+.+++...+ ++.+
T Consensus 255 ~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~L 333 (542)
T COG1021 255 LAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQL 333 (542)
T ss_pred eeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchH
Confidence 999999999999999999999999999999999999999999888888999999999999999999999999999 9999
Q ss_pred ecccCcccccceecccCCCCCCCCCCcccccc-CCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~-~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
-+.|||.|.-...+. ..++......+-|+|+ |.=+++|+| ++|++|++||+|+|..+||-.++|||+.|+
T Consensus 334 QQVFGMAEGLvnyTR-LDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~ 404 (542)
T COG1021 334 QQVFGMAEGLVNYTR-LDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPE 404 (542)
T ss_pred HHHhhhhhhhhcccc-cCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCch
Confidence 999999995433333 2223333446789997 666899999 999999999999999999999999998775
No 77
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.9e-48 Score=452.29 Aligned_cols=356 Identities=17% Similarity=0.229 Sum_probs=302.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.++++++ |+++|+++. ++.+||+||.++++++|+.|++ .|+++|++|+++++++++++++++||++
T Consensus 2003 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~~~~~lAil~ 2075 (5163)
T PRK12316 2003 PGVHQRIAEQAARA----PEAIAVVFG--DQHLSYAELDSRANRLAHRLRA-RGVGPEVRVAIAAERSFELVVALLAVLK 2075 (5163)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-CCeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
+|++++|++|.++.+++.++++++++++++++.+....+... ....+.++.. ... ..... ........+++++|
T Consensus 2076 aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~--~~~~~~~~~~~~a~ 2150 (5163)
T PRK12316 2076 AGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD--AEW-ADYPD--TAPAVQLAGENLAY 2150 (5163)
T ss_pred hceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccch--hhh-hccCc--cCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998765544321 2222222211 111 11000 11223456899999
Q ss_pred EEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC--CCHHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~ 274 (409)
|+|||||||.||||+++|+++.+.+......+ ++.+.|+++...|++|..+++.++.++..|+++++.+. +++..++
T Consensus 2151 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~ 2229 (5163)
T PRK12316 2151 VIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-ELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLY 2229 (5163)
T ss_pred EEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-CCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHH
Confidence 99999999999999999999999998888888 68999999999999999888999999999999977753 6899999
Q ss_pred HHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC
Q 015325 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (409)
Q Consensus 275 ~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (409)
+.|+++++|++.++|+++..+.+...... ...+||.+++|||+++++++++|.+.+++.++++.||+||++..++....
T Consensus 2230 ~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 2308 (5163)
T PRK12316 2230 DEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKC 2308 (5163)
T ss_pred HHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeec
Confidence 99999999999999999999987643322 23589999999999999999999999888999999999999876554222
Q ss_pred CCCC---CCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 355 PDEC---RRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 355 ~~~~---~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.... ....++|+|+++++++|+| ++++++|.|+.|||+|+|+++++||||+|.
T Consensus 2309 ~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~ 2364 (5163)
T PRK12316 2309 RPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPG 2364 (5163)
T ss_pred ccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChh
Confidence 1111 1235799999999999999 889999999999999999999999999874
No 78
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-47 Score=375.86 Aligned_cols=359 Identities=23% Similarity=0.325 Sum_probs=299.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.|+.+.|.+.++++ |+++|++++ ++.+||.||.++++++|+.|.+ .|+++|++|+++++|+++++++++||++
T Consensus 12 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~~~~V~i~~~~~~~~~~~~la~~~ 84 (524)
T PRK06188 12 ATYGHLLVSALKRY----PDRPALVLG--DTRLTYGQLADRISRYIQAFEA-LGLGTGDAVALLSLNRPEVLMAIGAAQL 84 (524)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 68999999999998 999999998 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCc-hHHHHhhc-----CC-eEEEeCCC-cchhhhcccCCc-ccccccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSS-VVHKLAKL-----KH-RTILIDSP-EFDSMTMSWNSK-HELDRAK 188 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~-----~~-~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ 188 (409)
+|++++++++..+.+++.++++.++++.+++++. ......+. .. .++.++.. ....+....... .......
T Consensus 85 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (524)
T PRK06188 85 AGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAKFGPAPLVAA 164 (524)
T ss_pred hCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhccCccccccc
Confidence 9999999999999999999999999999999876 22222211 11 12222211 111111110000 0111122
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCC
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF 268 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~ 268 (409)
..++++++++|||||||.||+|.++|+++..........+ ....++++++..|++|.+++ .++.++..|+++++.+.+
T Consensus 165 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~g~-~~~~~l~~G~~~~~~~~~ 242 (524)
T PRK06188 165 ALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-EWPADPRFLMCTPLSHAGGA-FFLPTLLRGGTVIVLAKF 242 (524)
T ss_pred CCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCcEEEEecCchhhhhH-HHHHHHHcCCEEEEcCCC
Confidence 3456699999999999999999999999998888877777 68899999999999998887 467889999999999999
Q ss_pred CHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccce
Q 015325 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (409)
Q Consensus 269 ~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (409)
++..+++.++++++|++.++|+++..+++........++++|.+++||++++++..+.+.+.+ +..+++.||+||++..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 321 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMV 321 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCc
Confidence 999999999999999999999999999988766666789999999999999999999999988 7889999999999765
Q ss_pred ecccCCCC----CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCC
Q 015325 349 VFRTVGPD----ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 349 ~~~~~~~~----~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~ 407 (409)
++...... ......++|+|++|++++|+| +++++++.|+.|||+++|+.++.||++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 383 (524)
T PRK06188 322 ITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRP 383 (524)
T ss_pred eeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCCh
Confidence 54422111 223557899999999999999 77999999999999999999999999876
No 79
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=7.4e-48 Score=418.32 Aligned_cols=362 Identities=14% Similarity=0.154 Sum_probs=292.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeC-------CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINS-------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
.++.+.|.++++++ |+++|+++. ..++++||+||.++++++|++|++ .|+++|++|+|+++|++++++
T Consensus 236 ~~l~~~~~~~a~~~----pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~~~~~i~ 310 (1389)
T TIGR03443 236 GAIHDIFADNAEKH----PDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-TGIKRGDVVMIYAYRGVDLVV 310 (1389)
T ss_pred CcHHHHHHHHHHhC----CCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEecCCHHHHH
Confidence 57999999999998 999999863 135789999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCch---HHHHhh-----c----CCeEEEeCCC-cc------
Q 015325 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---VHKLAK-----L----KHRTILIDSP-EF------ 171 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---~~~~~~-----~----~~~~~~~~~~-~~------ 171 (409)
+++||+++|++++|++|.++.+++.++++.++++++++.... ...+.. . ....+.+... ..
T Consensus 311 ~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1389)
T TIGR03443 311 AVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLE 390 (1389)
T ss_pred HHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccc
Confidence 999999999999999999999999999999999999987542 111110 0 0111111100 00
Q ss_pred ---hhhhcccCCcc-cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHH
Q 015325 172 ---DSMTMSWNSKH-ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (409)
Q Consensus 172 ---~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 247 (409)
.+......... ........++++++|+|||||||.||||+++|+++.+.+.+....+ ++.+.|+++...|++|..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~d~ 469 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-GLSENDKFTMLSGIAHDP 469 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEecCceecc
Confidence 00000000000 0111224578999999999999999999999999999888888777 688999999999999998
Q ss_pred hHHHHHHHHHhCCeEEEecC---CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHH
Q 015325 248 GLFFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTI 324 (409)
Q Consensus 248 g~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~ 324 (409)
+++.++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.... ...+++||.+++||+++++.+.
T Consensus 470 ~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 470 IQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred hHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHH
Confidence 88899999999999999864 36889999999999999999999999987643 2347899999999999999999
Q ss_pred HHHHHhCCCCceecccCcccccceecccCCCCC---------CCCCCccccccCCceEEEecCC-CCCCCCCCCcceEEE
Q 015325 325 MAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPE-TGDSLPPGKEGELSI 394 (409)
Q Consensus 325 ~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~---------~~~~~s~G~p~~~~~v~i~d~~-~g~~~~~g~~Gei~v 394 (409)
+++++.++++++++.||+||++..++....... .....++|+|+++++++|+|++ .+++++.|+.|||+|
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i 626 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYV 626 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEe
Confidence 999998889999999999999876554221111 1124678999999999999943 358899999999999
Q ss_pred ecCccccccCCCCC
Q 015325 395 RGPTIMKGIFLPHF 408 (409)
Q Consensus 395 ~g~~v~~gY~~~~~ 408 (409)
+||++++||||+|+
T Consensus 627 ~G~~v~~GY~~~p~ 640 (1389)
T TIGR03443 627 RAGGLAEGYLGLPE 640 (1389)
T ss_pred cccccchhcCCChh
Confidence 99999999999874
No 80
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=3.4e-47 Score=375.52 Aligned_cols=359 Identities=23% Similarity=0.290 Sum_probs=294.9
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
++..++.+.|.+.+. |+++|+++. ++.+||.||.++++++|+.|.+ .|+++|++|+++++|+.+++++++|
T Consensus 22 ~~~~~~~~~~~~~a~------p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 22 WQDLPLTDILTRHAA------SDAIAVICG--ERQFSYRELNQASDNLACSLRR-QGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred ecCccHHHHHHHhhC------CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCChHHHHHHHHH
Confidence 334789999977665 799999997 7899999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCch--------HHHHhhc--CCeEEEeCC----CcchhhhcccCC
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--------VHKLAKL--KHRTILIDS----PEFDSMTMSWNS 180 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~ 180 (409)
|+++|++++++.+.....++.++++.++++++++++.. ...+... ....+.... ..+.........
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPAE 172 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCccc
Confidence 99999998887777788899999999999999997642 1222111 122222221 122222222211
Q ss_pred cccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHH--HHHHHHHh
Q 015325 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAAL 258 (409)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~--~~~~~l~~ 258 (409)
........++++++++|||||||.||+|++||+++...+......+ +..++|++++.+|++|.+++. .++.++..
T Consensus 173 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~ 249 (536)
T PRK10946 173 --DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-GFTPQTRYLCALPAAHNYPMSSPGALGVFLA 249 (536)
T ss_pred --ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCceEEEecCccccccchhhhHHHHhhc
Confidence 1112234568899999999999999999999999999888877777 688899999999999988873 57889999
Q ss_pred CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCC--CCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCce
Q 015325 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG--STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (409)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~--~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i 336 (409)
|+++++.+.+++..++..++++++|++.++|.++..+++.. ......+++||.+++||+++++.+.++|.+.+ ++++
T Consensus 250 g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~ 328 (536)
T PRK10946 250 GGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQL 328 (536)
T ss_pred CcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeE
Confidence 99999998889999999999999999999999999998752 22334568999999999999999999999998 8999
Q ss_pred ecccCcccccceecccCCCCCCCCCCcccccc-CCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~-~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++.||+||+...... ..........++|+|+ |++.++|+| ++|+++++|+.|||+++|+.++.|||+++.
T Consensus 329 ~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~ 399 (536)
T PRK10946 329 QQVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQ 399 (536)
T ss_pred EEeecccccceeeec-CCCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcc
Confidence 999999997543332 1222234567899999 899999999 889999999999999999999999999874
No 81
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=5.7e-47 Score=376.27 Aligned_cols=379 Identities=23% Similarity=0.307 Sum_probs=300.7
Q ss_pred CeeeecCCCCCCCC--CCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhH-hccCCCCC
Q 015325 19 TKTFHSLRPPIDLP--PEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQ-NVTRLSKN 95 (409)
Q Consensus 19 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~~gv~~g 95 (409)
.+.|++++|+-..- +.++..++.+.|...+.++ |+++|+++. ++.+||+||.+++.++|+.|+ + .|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~-~g~~~g 76 (560)
T PRK08751 4 ARPWLQSYPAGVAAEIDLEQFRTVAEVFATSVAKF----ADRPAYHSF--GKTITYREADQLVEQFAAYLLGE-LQLKKG 76 (560)
T ss_pred ccchhhhcCCCCCCccCCcCCCcHHHHHHHHHHhC----CCCceEEEC--CceeeHHHHHHHHHHHHHHHHHH-hCCCCC
Confidence 45566666553222 2244468999999999888 999999987 789999999999999999996 5 899999
Q ss_pred CEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhh----cCCe-EEEeCCC-
Q 015325 96 DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHR-TILIDSP- 169 (409)
Q Consensus 96 ~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~-~~~~~~~- 169 (409)
++|+++++|+.+++++++||+++|+++++++|..+.+++.+++++++++++++++.....+.+ .... ++..+..
T Consensus 77 ~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (560)
T PRK08751 77 DRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGD 156 (560)
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhh
Confidence 999999999999999999999999999999999999999999999999999998766544332 1111 1111100
Q ss_pred ------------------------------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHH
Q 015325 170 ------------------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTA 219 (409)
Q Consensus 170 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~ 219 (409)
.+.+....... .........++++++++|||||||.||+|.+||+++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~ 235 (560)
T PRK08751 157 MLGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGRK-HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVA 235 (560)
T ss_pred hcccccchhhhhhhhhhhccccccCCCccccHHHHHhccCC-CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHH
Confidence 00111110000 01112234568899999999999999999999999987
Q ss_pred HHHHhhccCC---CCCC-CCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHH
Q 015325 220 AVASSFASSP---KRVS-PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVV 293 (409)
Q Consensus 220 ~~~~~~~~~~---~~~~-~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~ 293 (409)
.+......+. .... .+++++..|++|.+++ ...+.++..|++.++.. .+++..++..++++++|.+.++|.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 315 (560)
T PRK08751 236 NMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFN 315 (560)
T ss_pred HHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHH
Confidence 7766554431 1223 4677888999999988 45566777787776654 578999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceE
Q 015325 294 AMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEA 373 (409)
Q Consensus 294 ~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v 373 (409)
.+.+.......++++||.+++||+++++++.++|++.+ ++.+++.||+||++..++... .......+++|.|++++++
T Consensus 316 ~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~~~~v 393 (560)
T PRK08751 316 GLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINP-LTLKEYNGSIGLPIPSTDA 393 (560)
T ss_pred HHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceeccc-ccccccCCCcCccCCCceE
Confidence 99987655566788999999999999999999999988 889999999999987655422 2223445789999999999
Q ss_pred EEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 374 KIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 374 ~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+|+| ++|++++.|+.|||+++|+.++.|||+++.
T Consensus 394 ~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 427 (560)
T PRK08751 394 CIKD-DAGTVLAIGEIGELCIKGPQVMKGYWKRPE 427 (560)
T ss_pred EEEC-CCCCCCCCCCceEEEEecCccchhhcCChh
Confidence 9999 899999999999999999999999999864
No 82
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-47 Score=446.00 Aligned_cols=354 Identities=21% Similarity=0.299 Sum_probs=304.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.++++++ |+++|++++ +.++||+||.++++++|+.|++ .|+++|++|+++++++.+++++++|+++
T Consensus 1131 ~~l~~~~~~~a~~~----p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~s~~~iv~~lailk 1203 (4334)
T PRK05691 1131 AWLPELLNEQARQT----PERIALVWD--GGSLDYAELHAQANRLAHYLRD-KGVGPDVCVAIAAERSPQLLVGLLAILK 1203 (4334)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEEC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 57999999999999 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-CCeEEEeCCCcchhhhcccCCcccccccccCCCCEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (409)
+|++++|+++..+.+++.++++++++++++++......+... ....+..+...... ... ........+++++|
T Consensus 1204 aG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~a~ 1277 (4334)
T PRK05691 1204 AGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLHLDS----WPS--QAPGLHLHGDNLAY 1277 (4334)
T ss_pred hCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeeccccccc----cCC--CCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998765544332 11222222111110 000 11122345789999
Q ss_pred EEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec---CCCHHHH
Q 015325 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (409)
Q Consensus 197 i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~~~~~ 273 (409)
++|||||||.||||+++|+++.+.+.+....+ .+.+++++++..|++|..+++.++.++..|+++++.+ ..++..+
T Consensus 1278 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l 1356 (4334)
T PRK05691 1278 VIYTSGSTGQPKGVGNTHAALAERLQWMQATY-ALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRI 1356 (4334)
T ss_pred EEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-CCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHH
Confidence 99999999999999999999999988888877 6899999999999999999999999999999999985 3689999
Q ss_pred HHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccC
Q 015325 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (409)
Q Consensus 274 ~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (409)
++.++++++|++.++|++++.+.+... ...+++||.+++|||++++++.++|.+.+|+++++|.||+||++..++...
T Consensus 1357 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 1434 (4334)
T PRK05691 1357 AELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQ 1434 (4334)
T ss_pred HHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeee
Confidence 999999999999999999999987543 235789999999999999999999999999999999999999987665432
Q ss_pred CCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 354 ~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.........++|+|+++++++|+| +++++++.|+.|||+|+|+++++||+|+|.
T Consensus 1435 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~ 1488 (4334)
T PRK05691 1435 CQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPA 1488 (4334)
T ss_pred cccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCcc
Confidence 222334457899999999999999 889999999999999999999999999875
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-46 Score=370.63 Aligned_cols=351 Identities=24% Similarity=0.273 Sum_probs=290.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhcc-CCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT-RLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~-gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
.++.+.|...+. ++++|++++ ++.+||.||.++++++|++|++ . |++++++|+++++|+++++++++||+
T Consensus 5 ~~~~~~l~~~a~------~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~-~~~~~~~~~V~i~~~n~~~~~~~~lA~~ 75 (529)
T PRK07867 5 PTVAELLLPLAE------DDDRGLYFE--DSFTSWREHIRGSAARAAALRA-RLDPTRPPHVGVLLDNTPEFSLLLGAAA 75 (529)
T ss_pred ccHHHHHHHhcc------cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 678888877664 678999987 7899999999999999999998 6 89999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc--CCeEEEeCCCcchhhhcccCCcccccccccCCCCE
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDV 194 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (409)
++|++++|+++..+.+++.++++++++++++++++....+... ...++.++...+.+.+...... ........++++
T Consensus 76 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~ 154 (529)
T PRK07867 76 LSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRDA-EPPFRVADPDDL 154 (529)
T ss_pred hcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCCC-CCCcccCCccce
Confidence 9999999999999999999999999999999998776655432 2334444433344433321111 112233567899
Q ss_pred EEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHH
Q 015325 195 AAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMM 273 (409)
Q Consensus 195 a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~ 273 (409)
++++|||||||.||+|++||+++..........+ +....|++++..|++|.+++ ..++.++..|+++++.+.+++..+
T Consensus 155 ~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 233 (529)
T PRK07867 155 FMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGF 233 (529)
T ss_pred EEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHH
Confidence 9999999999999999999999988888777777 67889999999999999998 557778999999999988999999
Q ss_pred HHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccC
Q 015325 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (409)
Q Consensus 274 ~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (409)
+..++++++|++.++|+.+..++..........+++|. ++||+.+++. .++|.+.+ ++++++.||+||++..++..
T Consensus 234 ~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~-~~~~~~~~-g~~l~~~YG~TE~~~~~~~~- 309 (529)
T PRK07867 234 LPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGD-IARFARRF-GCVVVDGFGSTEGGVAITRT- 309 (529)
T ss_pred HHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHH-HHHHHHHh-CCcEEEeecccccccccccC-
Confidence 99999999999999999999988765433333467885 5688888776 46778888 89999999999997654431
Q ss_pred CCCCCCCCCccccccCCceEEEecCCCCCCCCCCC------------cceEEE-ecCccccccCCCCC
Q 015325 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK------------EGELSI-RGPTIMKGIFLPHF 408 (409)
Q Consensus 354 ~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~------------~Gei~v-~g~~v~~gY~~~~~ 408 (409)
.....+++|.|+++ ++++|++++++++.|+ .|||++ +|++++.|||+++.
T Consensus 310 ---~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~ 372 (529)
T PRK07867 310 ---PDTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPE 372 (529)
T ss_pred ---CCCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChH
Confidence 12345689999999 7888878899999998 999999 99999999999873
No 84
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=7.6e-47 Score=371.94 Aligned_cols=360 Identities=25% Similarity=0.325 Sum_probs=293.4
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCC---CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
.++.+++.+.++++ |+++|+++.+. .+.+||.||.++++++|+.|.+ +|+++||+|+++++|+.+++++++|
T Consensus 7 ~~l~~~~~~~a~~~----p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 7 QHLRQMWDDLADVY----GHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-LGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred ccHHHHHHHHHHHC----CCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 57999999999998 99999997531 2689999999999999999998 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc------CC-eEEEeCC--------CcchhhhcccC
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KH-RTILIDS--------PEFDSMTMSWN 179 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~-~~~~~~~--------~~~~~~~~~~~ 179 (409)
|+++|++++++++..+.+++.++++++++++++++.+....+.+. .. .++..+. ..+++......
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQP 161 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCC
Confidence 999999999999999999999999999999999998766554432 11 1222221 11222211111
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHh
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~ 258 (409)
.. ........++++++++|||||||.||+|+++|+++........... ....++++++.+|++|..+. ..++.++..
T Consensus 162 ~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 239 (517)
T PRK08008 162 AT-LCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-ALRDDDVYLTVMPAFHIDCQCTAAMAAFSA 239 (517)
T ss_pred cc-ccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-CCCCCCeEEEecCcHHHHHHHHHHHHHHhc
Confidence 00 1112234568899999999999999999999999986543333233 46788999999999998766 778999999
Q ss_pred CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceec
Q 015325 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (409)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 338 (409)
|+++++.+++++..+++.++++++|++.++|+++..+.............+|.+.+++ +++++...+|.+.+ ++++++
T Consensus 240 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 317 (517)
T PRK08008 240 GATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRLLT 317 (517)
T ss_pred CcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeEEe
Confidence 9999999999999999999999999999999999999876554434456788877754 78999999999988 899999
Q ss_pred ccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEec---CccccccCCCCC
Q 015325 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG---PTIMKGIFLPHF 408 (409)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g---~~v~~gY~~~~~ 408 (409)
.||+||+++.++... ........++|+|+++++++|+| ++|++++.|+.|||+++| ++++.|||++++
T Consensus 318 ~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~ 388 (517)
T PRK08008 318 SYGMTETIVGIIGDR-PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPK 388 (517)
T ss_pred eccccccccccccCC-ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChH
Confidence 999999986554422 23334567899999999999999 889999999999999998 689999999874
No 85
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.6e-46 Score=368.89 Aligned_cols=356 Identities=18% Similarity=0.269 Sum_probs=292.3
Q ss_pred CCHHHHHhhc--cCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 38 ISAVDYVSSL--RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 38 ~~~~~~l~~~--~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
+|.+.-+... ++.+ ||++|++++ +..+||.||.++++++|++|.+ .|+++|++|+++++|+.+++++++||
T Consensus 3 ~~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~v~l~~~~~~~~~~~~~a~ 75 (508)
T TIGR02262 3 YNAAEDLLDRNVVEGR----GGKTAFIDD--ISSLSYGELEAQVRRLGAALRR-LGVKREERVLLLMLDGVDFPIAFLGA 75 (508)
T ss_pred chHHHHHHHHHHhccc----CCceEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 4555444443 3456 999999987 7899999999999999999998 99999999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----C-CeEEEeCCC-----cchhhhcccCCcccc
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDSP-----EFDSMTMSWNSKHEL 184 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~-~~~~~~~~~-----~~~~~~~~~~~~~~~ 184 (409)
+++|++++|+++..+.+++.++++.+++++++++......+.+. . ..++..+.. .+.+....... ..
T Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 153 (508)
T TIGR02262 76 IRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATESE--QF 153 (508)
T ss_pred HHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCCC--cc
Confidence 99999999999999999999999999999999998765544321 1 112222211 12222111110 11
Q ss_pred cccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHH-hhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeE
Q 015325 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (409)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~ 262 (409)
......++++++++|||||||.||+|.++|+++...+.. ....+ +.+.+|+++...|++|.+++ ..++.++..|+++
T Consensus 154 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~ 232 (508)
T TIGR02262 154 KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-GIREDDVVFSAAKLFFAYGLGNALTFPMSVGATT 232 (508)
T ss_pred CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-CCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceE
Confidence 122345688999999999999999999999999877655 33444 67889999999999999988 6678889999999
Q ss_pred EEecC-CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccC
Q 015325 263 VVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (409)
Q Consensus 263 v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 341 (409)
++.+. +++..+++.|+++++|.+.++|+++..+++....+.....++|.+++||+++++++.+.|++.| ++++++.||
T Consensus 233 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG 311 (508)
T TIGR02262 233 VLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIG 311 (508)
T ss_pred EEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCcc
Confidence 88764 6899999999999999999999999988876544444567899999999999999999999999 899999999
Q ss_pred cccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCC
Q 015325 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~ 407 (409)
+||++...+. ........+++|+|++|++++|+| ++++++++|+.|||+++|++++.||++++
T Consensus 312 ~tE~~~~~~~--~~~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~ 374 (508)
T TIGR02262 312 STEMLHIFLS--NLPGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNR 374 (508)
T ss_pred ccccCceeec--CCccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCH
Confidence 9999875543 222233467899999999999999 89999999999999999999999999876
No 86
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.3e-47 Score=445.84 Aligned_cols=353 Identities=17% Similarity=0.209 Sum_probs=301.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.+.++++++ |+++|+++. +..+||+||.++++++|+.|++ .|+++|++|+|+++++.+++++++|+++
T Consensus 3720 ~~~~~~~~~~~~~~----p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~-~gv~~~~~V~v~~~~s~~~~v~~lavlk 3792 (4334)
T PRK05691 3720 QSYVRLFEAQVAAH----PQRIAASCL--DQQWSYAELNRAANRLGHALRA-AGVGVDQPVALLAERGLDLLGMIVGSFK 3792 (4334)
T ss_pred cCHHHHHHHHHHhC----CCceEEEcC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58899999999999 999999998 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-------C-eEEEeCCCcchhhhcccCCccccccccc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-------H-RTILIDSPEFDSMTMSWNSKHELDRAKV 189 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (409)
+|++++||+|..+.+++.++++++++++++++........... . .++..+ +........ .......
T Consensus 3793 aG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~ 3866 (4334)
T PRK05691 3793 AGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWE-----EVQAGEVAS-HNPGIYS 3866 (4334)
T ss_pred hCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeec-----ccccccccc-cCCCCCC
Confidence 9999999999999999999999999999999886543322110 0 111111 111100000 1122335
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC--
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-- 267 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-- 267 (409)
.+++++||+|||||||+||||+++|+++.+.+.+....+ ++++.|+++...+++|..+++.++.++..|+++++.+.
T Consensus 3867 ~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~ 3945 (4334)
T PRK05691 3867 GPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAI 3945 (4334)
T ss_pred CCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-CCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccc
Confidence 678999999999999999999999999999998888888 79999999999999999999999999999999999864
Q ss_pred -CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCccccc
Q 015325 268 -FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTEST 346 (409)
Q Consensus 268 -~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~ 346 (409)
.++..+++.++++++|++.++|+++..++... ...+++||.+++|||++++++.++|.+.+|+++++|.||+||++
T Consensus 3946 ~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t 4022 (4334)
T PRK05691 3946 AHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECS 4022 (4334)
T ss_pred cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccce
Confidence 57899999999999999999999999988643 23467899999999999999999999999999999999999998
Q ss_pred ceecccCCCCC--CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 347 AGVFRTVGPDE--CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 347 ~~~~~~~~~~~--~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
..++....... .....++|+|+++++++|+| +.++++|.|..|||+|+|+++++||||+|.
T Consensus 4023 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~ 4085 (4334)
T PRK05691 4023 DDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPL 4085 (4334)
T ss_pred eEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcc
Confidence 76654322111 22345799999999999999 999999999999999999999999999874
No 87
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-47 Score=375.45 Aligned_cols=360 Identities=21% Similarity=0.226 Sum_probs=292.1
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|.+.+..+ |+++|+++. ++++||+||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 10 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~la~~~ 82 (540)
T PRK06164 10 DTLASLLDAHARAR----PDAVALIDE--DRPLSRAELRALVDRLAAWLAA-QGVRRGDRVAVWLPNCIEWVVLFLACAR 82 (540)
T ss_pred CCHHHHHHHHHHhC----CCCeEEecC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 68999999999999 999999976 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH-----HHHhhc------CC-eEEEeCCCc--c--------hhhh
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------KH-RTILIDSPE--F--------DSMT 175 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------~~-~~~~~~~~~--~--------~~~~ 175 (409)
+|++++|+++..+.+++.++++++++++++++++.. ..+... .. .++.++... . ....
T Consensus 83 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (540)
T PRK06164 83 LGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLF 162 (540)
T ss_pred hCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCcccccccc
Confidence 999999999999999999999999999999976532 111110 11 122222000 0 0000
Q ss_pred cccCCc--ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHH
Q 015325 176 MSWNSK--HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCF 253 (409)
Q Consensus 176 ~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~ 253 (409)
...... .........++++++++|||||||.||+|.+||+++..........+ ++..++++++.+|++|.+|+..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~ 241 (540)
T PRK06164 163 ALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-GYDPGAVLLAALPFCGVFGFSTLL 241 (540)
T ss_pred cccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCCEEEEcCCchhHHHHHHHH
Confidence 000000 00001123457899999999999999999999999998888888777 688999999999999999998899
Q ss_pred HHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecC-CCCCHHHHHHHHHhCC
Q 015325 254 RAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA-APLGKDTIMAFASKFP 332 (409)
Q Consensus 254 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G-~~~~~~~~~~~~~~~~ 332 (409)
.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+.. .....++++|.+..+| .+...++.+++.+.
T Consensus 242 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-- 318 (540)
T PRK06164 242 GALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR-- 318 (540)
T ss_pred HHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--
Confidence 9999999999999899999999999999999999999999998872 3445688999887766 55556676766655
Q ss_pred CCceecccCcccccceecccCCCC-CCCCCCcccccc-CCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 333 KVVLVQAYGLTESTAGVFRTVGPD-ECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~s~G~p~-~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++++++.||+||++..++...... ......+.|.|+ +++.++|+|+++++++++|+.|||+|+|++++.|||+++.
T Consensus 319 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~ 396 (540)
T PRK06164 319 GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPD 396 (540)
T ss_pred CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCch
Confidence 889999999999987665432211 122335678875 8999999999999999999999999999999999999874
No 88
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=8.3e-47 Score=370.59 Aligned_cols=356 Identities=21% Similarity=0.281 Sum_probs=298.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
+|+.+.|.+.+..+ |++++++++ +.++||.||.++++++|..|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~-~g~~~~~~v~~~~~~~~~~~~~~~a~~~ 74 (503)
T PRK04813 2 MDIIETIEEFAQTQ----PDFPAYDYL--GEKLTYGQLKEDSDALAAFIDS-LKLPDKSPIIVFGHMSPEMLATFLGAVK 74 (503)
T ss_pred chHHHHHHHHHHhC----CCceEEEeC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 67889999999888 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (409)
+|++++++++..+.+++.++++..++++++++.+... .......+.. .++........ .........+++++++
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~i 148 (503)
T PRK04813 75 AGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL--EILGIPVITL--DELKDIFATGN--PYDFDHAVKGDDNYYI 148 (503)
T ss_pred cCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc--cccCCcEEeh--HHhhhhhhccc--cccccccCCCCCcEEE
Confidence 9999999999999999999999999999999876421 1111112111 11111111000 0111223456889999
Q ss_pred EcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC---CCHHHHH
Q 015325 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (409)
Q Consensus 198 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~ 274 (409)
+|||||||.||+|.++|+++..........+ .+...++++...|++|..++..++.++..|+++++.+. .++..++
T Consensus 149 ~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~ 227 (503)
T PRK04813 149 IFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-ALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLF 227 (503)
T ss_pred EECCCCCCCCcEEEeehHHHHHHHHHHHHHc-CCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHH
Confidence 9999999999999999999998888777777 68889999999999999998888999999999999875 5889999
Q ss_pred HHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC
Q 015325 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (409)
Q Consensus 275 ~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (409)
..+.++++|++.++|+++..+..........++++|.++++|+++++.+.++|.+.|+++.+++.||+||++..++....
T Consensus 228 ~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 307 (503)
T PRK04813 228 ETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEI 307 (503)
T ss_pred HHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEe
Confidence 99999999999999999988776654445567899999999999999999999999989999999999999765543221
Q ss_pred CC---CCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 355 PD---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 355 ~~---~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.. ......++|+|.++++++|+| ++|.+++.|+.|||+++|++++.|||+++.
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 363 (503)
T PRK04813 308 TDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPE 363 (503)
T ss_pred cccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChh
Confidence 11 123445799999999999999 899999999999999999999999999864
No 89
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-46 Score=372.18 Aligned_cols=360 Identities=29% Similarity=0.423 Sum_probs=291.2
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.+...+..+ |+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+.++++++|||++
T Consensus 24 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 96 (563)
T PRK06710 24 QPLHKYVEQMASRY----PEKKALHFL--GKDITFSVFHDKVKRFANYLQK-LGVEKGDRVAIMLPNCPQAVIGYYGTLL 96 (563)
T ss_pred ccHHHHHHHHHHHC----CCceEEEec--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 57889998888888 999999997 7899999999999999999998 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCe-EEEeCCCc----------------------
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPE---------------------- 170 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~~~~~~~~---------------------- 170 (409)
+|++++|++|..+.+++.++++.++++++++++.....+... ... ++......
T Consensus 97 ~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 97 AGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred cCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccc
Confidence 999999999999999999999999999999987654433211 011 11100000
Q ss_pred ----------chhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhcc-CCCCCCCCEEEE
Q 015325 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS-SPKRVSPAVMLF 239 (409)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~-~~~~~~~d~~l~ 239 (409)
+..+..... ..........+++++++|||||||.||+|.++|+++.......... +.....++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 177 KVSESETIHLWNSVEKEVN--TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred cccccchhhhhhhhhhccc--cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 000000000 0000111234789999999999999999999999987554333222 212344568899
Q ss_pred eCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCC
Q 015325 240 TMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAP 318 (409)
Q Consensus 240 ~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~ 318 (409)
..|++|.+++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+++........+++||.+++||++
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~ 334 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAP 334 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCc
Confidence 9999999988 556778999999999988999999999999999999999999999998765555567899999999999
Q ss_pred CCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCc
Q 015325 319 LGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPT 398 (409)
Q Consensus 319 ~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~ 398 (409)
+++++.+++++.+ +.++++.||+||++...... .......++++|+|++++.++++|+++++++++|+.|||+++|+.
T Consensus 335 ~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~ 412 (563)
T PRK06710 335 LPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSN-FLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQ 412 (563)
T ss_pred CCHHHHHHHHHhh-CCCEecccccccCccccccC-cccccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCc
Confidence 9999999999988 89999999999998654331 112233457899999999999999889999999999999999999
Q ss_pred cccccCCCCC
Q 015325 399 IMKGIFLPHF 408 (409)
Q Consensus 399 v~~gY~~~~~ 408 (409)
++.||++++.
T Consensus 413 ~~~gY~~~~~ 422 (563)
T PRK06710 413 IMKGYWNKPE 422 (563)
T ss_pred cchhhhCChH
Confidence 9999998764
No 90
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.1e-47 Score=373.12 Aligned_cols=360 Identities=19% Similarity=0.266 Sum_probs=290.5
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCC--CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
.++.++|...+..+ |+++++.+..+ .+.+||.||.++++++|++|.+ .|+++||+|+++++|+++++++++||
T Consensus 10 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 10 LLISSLIAHAARHA----GDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-LGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred CCHHHHHHHHHhhC----CCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 67888988888888 88888875322 2689999999999999999999 99999999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCe-EEEeCC-----------Ccchhhhccc
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDS-----------PEFDSMTMSW 178 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~-----------~~~~~~~~~~ 178 (409)
+++|++++++++..+.+++..+++.+++++++++.+..+.+.+. ... ++.... ..++++....
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQ 164 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhccc
Confidence 99999999999999999999999999999999998765544321 111 111111 0122221111
Q ss_pred CCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHH--HhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHH
Q 015325 179 NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA--SSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAA 256 (409)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~--~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l 256 (409)
.. ........++++++++|||||||.||+|++||+++..... .....+ +...+|++++..|++|.+++...+.++
T Consensus 165 ~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~~~~~~~~~l 241 (539)
T PRK07008 165 DG--DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-GLSARDAVLPVVPMFHVNAWGLPYSAP 241 (539)
T ss_pred CC--CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-CCCCCceEEecCchHHhhhHHHHHHHH
Confidence 11 1112234567899999999999999999999999865432 233344 578899999999999988876668889
Q ss_pred HhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCc
Q 015325 257 ALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVV 335 (409)
Q Consensus 257 ~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~ 335 (409)
..|+++++.+ .+++..+++.++++++|++.++|+++..+++.......++++||.++++|+++++++.++|.+.+ +++
T Consensus 242 ~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 320 (539)
T PRK07008 242 LTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVE 320 (539)
T ss_pred hcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCc
Confidence 9999999874 57899999999999999999999999999987766666788999999999999999999999998 899
Q ss_pred eecccCcccccceecccCCCC---------CCCCCCccccccCCceEEEecCCCCCCCCCC--CcceEEEecCccccccC
Q 015325 336 LVQAYGLTESTAGVFRTVGPD---------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMKGIF 404 (409)
Q Consensus 336 i~~~yG~tE~~~~~~~~~~~~---------~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g--~~Gei~v~g~~v~~gY~ 404 (409)
+++.||+||++..++...... ......++|+|+||++++|+| +++++++.+ +.|||+++|+.++.|||
T Consensus 321 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~ 399 (539)
T PRK07008 321 VIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYF 399 (539)
T ss_pred eecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhc
Confidence 999999999986544321100 011246789999999999999 788888754 57999999999999999
Q ss_pred CCC
Q 015325 405 LPH 407 (409)
Q Consensus 405 ~~~ 407 (409)
+++
T Consensus 400 ~~~ 402 (539)
T PRK07008 400 RGD 402 (539)
T ss_pred CCh
Confidence 986
No 91
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.4e-46 Score=373.97 Aligned_cols=359 Identities=25% Similarity=0.330 Sum_probs=280.5
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.|+.++|.+.++.+ |+++|++.+ +.++||+||.++++++|+.|.+ +|+++||+|+|+++|++++++++|||++
T Consensus 14 ~~~~~~l~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~-~Gl~~gd~Vai~~~n~~e~~~~~la~~~ 86 (579)
T PLN03102 14 LTPITFLKRASECY----PNRTSIIYG--KTRFTWPQTYDRCCRLAASLIS-LNITKNDVVSVLAPNTPAMYEMHFAVPM 86 (579)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 67888888888888 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----------CCeEEEeCCC-----------cchhhh
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----------KHRTILIDSP-----------EFDSMT 175 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----------~~~~~~~~~~-----------~~~~~~ 175 (409)
+|++++|+++..+.+++.++++.++++++|++++....+.+. ..+++.++.. ++.++.
T Consensus 87 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (579)
T PLN03102 87 AGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLI 166 (579)
T ss_pred cCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHH
Confidence 999999999999999999999999999999987765444321 1234333321 111121
Q ss_pred cccCCcccc---cccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHH
Q 015325 176 MSWNSKHEL---DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (409)
Q Consensus 176 ~~~~~~~~~---~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~ 252 (409)
......... ......++++++|+|||||||.||+|+++|+++........... .....+++++.+|++|..++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~ 245 (579)
T PLN03102 167 QRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-EMGTCPVYLWTLPMFHCNGWTFT 245 (579)
T ss_pred hccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-CCCCCCeEEecCChhhhcchhHH
Confidence 111100000 00123468899999999999999999999999755444333333 45677899999999999998777
Q ss_pred HHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCC
Q 015325 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (409)
Q Consensus 253 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~ 332 (409)
+.++..|+++++...+++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++++ +
T Consensus 246 ~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~- 323 (579)
T PLN03102 246 WGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L- 323 (579)
T ss_pred HHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-
Confidence 88899999999998889999999999999999999999999999875444444567888999999999999999876 5
Q ss_pred CCceecccCcccccceecccCCCC------C------CCCCCccccccCCceEEEecCCCCCCCCC--CCcceEEEecCc
Q 015325 333 KVVLVQAYGLTESTAGVFRTVGPD------E------CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPT 398 (409)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~~------~------~~~~~s~G~p~~~~~v~i~d~~~g~~~~~--g~~Gei~v~g~~ 398 (409)
++++++.||+||+++.++...... . ....+..+.+++ .++++|.+++++++. ++.|||+|+|++
T Consensus 324 g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~ 401 (579)
T PLN03102 324 GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSS 401 (579)
T ss_pred CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcc
Confidence 889999999999986543311100 0 011223333333 456777667788875 368999999999
Q ss_pred cccccCCCCC
Q 015325 399 IMKGIFLPHF 408 (409)
Q Consensus 399 v~~gY~~~~~ 408 (409)
++.|||++|.
T Consensus 402 ~~~GY~~~~~ 411 (579)
T PLN03102 402 IMKGYLKNPK 411 (579)
T ss_pred hhhhhcCChh
Confidence 9999999864
No 92
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.1e-45 Score=365.51 Aligned_cols=360 Identities=27% Similarity=0.384 Sum_probs=288.8
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
-++.+.|.+.+..+ |+++|++++ ++.+||.||.++++++|++|.+ .|+++|++|+++++|+.+++++++||++
T Consensus 21 ~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 93 (541)
T TIGR03205 21 GTLPDLLSKAAADY----GPRPALEFR--DRPITYTELEAMAETAAAALLR-AGYGKDASVALYLGNTPDHPINFFGALK 93 (541)
T ss_pred CCHHHHHHHHHHHc----CCCceEEEC--CcEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 58999999988888 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCch--HHHHhh---cC-C-eEEEeCCCc-------------------c
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--VHKLAK---LK-H-RTILIDSPE-------------------F 171 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~---~~-~-~~~~~~~~~-------------------~ 171 (409)
+|++++|+++..+.+++.++++.++++++++++.. .....+ .. . .++...... +
T Consensus 94 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 94 AGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred cCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccH
Confidence 99999999999999999999999999999998632 111111 00 1 122222111 1
Q ss_pred hhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC----CCCCCCCEEEEeCchhhHH
Q 015325 172 DSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS----PKRVSPAVMLFTMPYFHIY 247 (409)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~ 247 (409)
+++...... ........++++++++|||||||.||+|+++|+++........... ......+++++..|++|.+
T Consensus 174 ~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 174 ADFVKGAAA--PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIY 251 (541)
T ss_pred HHHHhcCCC--CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHH
Confidence 111111000 1111234568899999999999999999999999876543221110 0123457899999999998
Q ss_pred hH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHH
Q 015325 248 GL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMA 326 (409)
Q Consensus 248 g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~ 326 (409)
++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+........+++||.++.||+++++++.++
T Consensus 252 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~ 331 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANF 331 (541)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHH
Confidence 88 66788999999999988889999999999999999999999999998765444556789999999999999999999
Q ss_pred HHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEec-CCCCCCCCCCCcceEEEecCccccccCC
Q 015325 327 FASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVD-PETGDSLPPGKEGELSIRGPTIMKGIFL 405 (409)
Q Consensus 327 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d-~~~g~~~~~g~~Gei~v~g~~v~~gY~~ 405 (409)
+++.+ +.++++.||+||++..++... ......++++|.|++++.++|++ .+++++++.|+.|||+++|++++.|||+
T Consensus 332 ~~~~~-~~~~~~~YG~TE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 332 FERKT-GLKLKSGWGMTETCSPGTGHP-PEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHHh-CCCeecccccccCCcccccCC-CCCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccC
Confidence 99888 899999999999987655422 22233457899999999988763 2778999999999999999999999999
Q ss_pred CCC
Q 015325 406 PHF 408 (409)
Q Consensus 406 ~~~ 408 (409)
++.
T Consensus 410 ~~~ 412 (541)
T TIGR03205 410 RPE 412 (541)
T ss_pred Chh
Confidence 864
No 93
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-46 Score=367.64 Aligned_cols=341 Identities=26% Similarity=0.320 Sum_probs=271.4
Q ss_pred CCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
|+++|+++.++++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++++++.++.+++.
T Consensus 11 p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~~~~~~ 89 (501)
T PRK13390 11 PDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-AGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLTAPEAD 89 (501)
T ss_pred CCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCCHHHHH
Confidence 999999976557899999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCchHHHHhhcC--CeE-EEeCC--C---cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCc
Q 015325 136 RQIQLSNPVIAFATSSVVHKLAKLK--HRT-ILIDS--P---EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRV 207 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~~--~~~-~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~p 207 (409)
++++.++++++++++.......... ... +.... . .+++.... . .......++.++|+|||||||.|
T Consensus 90 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~a~i~~TSGTTG~P 163 (501)
T PRK13390 90 YIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAG-----A-GPRLTEQPCGAVMLYSSGTTGFP 163 (501)
T ss_pred HHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhcc-----c-CCCCCCCcccEEEEeCCCCCCCC
Confidence 9999999999999875443322211 111 11110 0 11111110 0 00111223579999999999999
Q ss_pred chhhh--ccHHHHHHHH---H-hhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhc
Q 015325 208 KGVML--THRNLTAAVA---S-SFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFR 281 (409)
Q Consensus 208 K~v~~--s~~~l~~~~~---~-~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~ 281 (409)
|+|++ +|+++..... . ....+ .+...+++++..|++|.+++...+..+..|+++++.+.+++..++..|++++
T Consensus 164 KgV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 242 (501)
T PRK13390 164 KGIQPDLPGRDVDAPGDPIVAIARAFY-DISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQATLGHVERYR 242 (501)
T ss_pred CEEEeeccccccccchhhhHhhHHHHh-CCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHHHHHHHHHcC
Confidence 99995 4555443211 1 12223 5778899999999999998855555677899999998899999999999999
Q ss_pred ceeEeechHHHHHHHhCCC--CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCC
Q 015325 282 VTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECR 359 (409)
Q Consensus 282 ~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~ 359 (409)
+|++.++|+++..+.+... .....++++|.++.||+++++++.+.+++.+ +..+++.||+||+++++.. .......
T Consensus 243 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~-~~~~~~~ 320 (501)
T PRK13390 243 ITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFI-DSPDWLA 320 (501)
T ss_pred CeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEe-cchhhcc
Confidence 9999999999999887542 2344578999999999999999999999988 7899999999999765443 2222234
Q ss_pred CCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 360 RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 360 ~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
..+++|+|+++ +++|+| ++|+++++|+.|||+++|++++.|||++|.
T Consensus 321 ~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 367 (501)
T PRK13390 321 HPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPE 367 (501)
T ss_pred CCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChh
Confidence 56789999999 799999 899999999999999999999999999874
No 94
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.9e-46 Score=367.91 Aligned_cols=359 Identities=20% Similarity=0.305 Sum_probs=289.5
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeC--CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINS--VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~--~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
++++.++|...++++ |++++++.. +..+++||+||.++++++|++|++ .|+++||+|+++++|+.+++++++|
T Consensus 9 ~~~~~~~~~~~a~~~----~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 9 PLLCHRIIDHAARIH----GNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-DGIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred CCCHHHHHHHHHHhC----CCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHH
Confidence 389999999999998 999999853 223789999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCe-EEEeCCC------------cchhhhc
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP------------EFDSMTM 176 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~------------~~~~~~~ 176 (409)
|+++|++++++++..+.+++..+++.+++++++++.+..+.+.+. ... ++.+... .+.++..
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIA 163 (542)
T ss_pred HHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhc
Confidence 999999999999999999999999999999999998765554321 111 2222110 1122211
Q ss_pred ccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHH-HH-HHhhccCCCCCCCCEEEEeCchhhHHhHHHHHH
Q 015325 177 SWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTA-AV-ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR 254 (409)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~-~~-~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 254 (409)
... .........++++++++|||||||.||+|.+||++++. .. ......+ ++..+|+++...|++|.+++...+.
T Consensus 164 ~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~h~~~~~~~~~ 240 (542)
T PRK06018 164 EAD--GDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-GTSAADTMLPVVPLFHANSWGIAFS 240 (542)
T ss_pred cCC--cccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-CCCCCCEEEEecCHHHHhhhHHHHh
Confidence 111 01111234567899999999999999999999997532 22 2223344 5788999999999999998866678
Q ss_pred HHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCC
Q 015325 255 AAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPK 333 (409)
Q Consensus 255 ~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~ 333 (409)
++..|+++++.. .+++..+++.++++++|++.++|+.+..+.+.......++++||.++++|+++++++.++|++ + +
T Consensus 241 ~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~ 318 (542)
T PRK06018 241 APSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-G 318 (542)
T ss_pred hhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-C
Confidence 899999998874 578999999999999999999999999998876555566789999999999999999999999 7 9
Q ss_pred CceecccCcccccceecccCCCCC---------CCCCCccccccCCceEEEecCCCCCCCCCC--CcceEEEecCccccc
Q 015325 334 VVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMKG 402 (409)
Q Consensus 334 ~~i~~~yG~tE~~~~~~~~~~~~~---------~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g--~~Gei~v~g~~v~~g 402 (409)
+++++.||+||++..++....... .....++|+|.+|++++|+| +++++++.+ ..|||+++|++++.|
T Consensus 319 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~g 397 (542)
T PRK06018 319 VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAA 397 (542)
T ss_pred CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchh
Confidence 999999999999876543211111 01235789999999999999 788888754 679999999999999
Q ss_pred cCCC
Q 015325 403 IFLP 406 (409)
Q Consensus 403 Y~~~ 406 (409)
||++
T Consensus 398 y~~~ 401 (542)
T PRK06018 398 YYRV 401 (542)
T ss_pred hhcC
Confidence 9984
No 95
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-46 Score=369.52 Aligned_cols=362 Identities=20% Similarity=0.261 Sum_probs=291.3
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCC-CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSV-TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
++|+.++|.+.+..+ |+++|++++. ..+.+||+||.+++.++|++|++..|+++||+|+++++|+.+++++++||
T Consensus 9 ~~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 9 PLSLTRILEYGSTVH----GDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred CCcHHHHHHHHHHhC----CCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 389999999999888 9999998753 24789999999999999999985369999999999999999999999999
Q ss_pred HHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CCe-EEEeCCC----------------cchh
Q 015325 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP----------------EFDS 173 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~----------------~~~~ 173 (409)
+++|++++++++..+.+++.++++.++++++|+++.....+.+. ..+ ++..+.. .|.+
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEA 164 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHH
Confidence 99999999999999999999999999999999998765544321 111 2222211 1222
Q ss_pred hhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHh--hccCCCCCCCCEEEEeCchhhHHhHHH
Q 015325 174 MTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS--FASSPKRVSPAVMLFTMPYFHIYGLFF 251 (409)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~g~~~ 251 (409)
+...... ........++++++++|||||||.||+|.++|+++....... ...+ .....+++++.+|++|.+++..
T Consensus 165 l~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~ 241 (576)
T PRK05620 165 LLDGRST--VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-AVTHGESFLCCVPIYHVLSWGV 241 (576)
T ss_pred HhhcCCC--cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-CCCCCCeEEEeCChHHhhhhHH
Confidence 2221111 111233456889999999999999999999999986554432 2234 5788999999999999999977
Q ss_pred HHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHh
Q 015325 252 CFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASK 330 (409)
Q Consensus 252 ~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~ 330 (409)
.+.++..|+++++.. .+++..+++.|+++++|.+.++|+++..++...........+||.+++||+++++.+.++|++.
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~ 321 (576)
T PRK05620 242 PLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEER 321 (576)
T ss_pred HHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHH
Confidence 889999999998875 4789999999999999999999999998876543333344689999999999999999999999
Q ss_pred CCCCceecccCcccccceecccCCCCC------CCCCCccccccCCceEEEecCCCCCCCC--CCCcceEEEecCccccc
Q 015325 331 FPKVVLVQAYGLTESTAGVFRTVGPDE------CRRWGSTGRLSAGLEAKIVDPETGDSLP--PGKEGELSIRGPTIMKG 402 (409)
Q Consensus 331 ~~~~~i~~~yG~tE~~~~~~~~~~~~~------~~~~~s~G~p~~~~~v~i~d~~~g~~~~--~g~~Gei~v~g~~v~~g 402 (409)
+ ++++++.||+||++...+....... .....++|++.++++++|+| + |++++ +|+.|||+++|+.++.|
T Consensus 322 ~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~g 398 (576)
T PRK05620 322 Y-GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTAS 398 (576)
T ss_pred h-CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCccccc
Confidence 8 8999999999999875543221110 11234789999999999999 5 77664 57899999999999999
Q ss_pred cCCCCC
Q 015325 403 IFLPHF 408 (409)
Q Consensus 403 Y~~~~~ 408 (409)
||+++.
T Consensus 399 Y~~~~~ 404 (576)
T PRK05620 399 YYHSPT 404 (576)
T ss_pred ccCCcc
Confidence 999874
No 96
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-46 Score=360.16 Aligned_cols=324 Identities=23% Similarity=0.277 Sum_probs=273.0
Q ss_pred CCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
++++|++++ ++++||+||.++++++|..|+. +|+|+++++|+.+++++++||+++|++++|+++..+.+++.
T Consensus 14 ~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~------~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 14 DIADAVRIG--GRVLSRSDLAGAATAVAERVAG------ARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred CCceEEEeC--CcEEEHHHHHHHHHHHHHHhcc------CCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 899999997 8999999999999999999874 58999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccH
Q 015325 136 RQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHR 215 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~ 215 (409)
++++++++++++++.+... . .......... ...+ .......++++++++|||||||.||+|.++|+
T Consensus 86 ~~l~~~~~~~il~~~~~~~--~--~~~~~~~~~~-----~~~~-----~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~ 151 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP--A--GLPHVPVRLH-----ARSW-----HRYPEPDPDAPALIVYTSGTTGPPKGVVLSRR 151 (471)
T ss_pred HHHHhcCCCEEEecCCccc--c--cccceeeecc-----cccc-----ccCCCCCCCceEEEEECCCCCCCCCEEEEeHH
Confidence 9999999999999763110 0 1111110000 0000 01112456899999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHH
Q 015325 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
++...+......+ .....+++++.+|++|.+|+ ..++.++..|+++++.+.+++..+++.++ +++|.+.++|+++..
T Consensus 152 ~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~ 229 (471)
T PRK07787 152 AIAADLDALAEAW-QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSR 229 (471)
T ss_pred HHHHHHHHHHHhc-CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHH
Confidence 9999888777777 68889999999999999998 67899999999999998899999999999 999999999999999
Q ss_pred HHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEE
Q 015325 295 MSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAK 374 (409)
Q Consensus 295 l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~ 374 (409)
+.+.... ...++++|.+++||+++++.+.++|++.+ +.++++.||+||++...+.. ......++++|+|++|++++
T Consensus 230 l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~vG~~~~g~~~~ 305 (471)
T PRK07787 230 IAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR--ADGERRPGWVGLPLAGVETR 305 (471)
T ss_pred HHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC--CCCcccCCcccccCCCcEEE
Confidence 9875432 33578899999999999999999999988 88999999999997654432 22334567899999999999
Q ss_pred EecCCCCCCCC-CCC-cceEEEecCccccccCCCCC
Q 015325 375 IVDPETGDSLP-PGK-EGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 375 i~d~~~g~~~~-~g~-~Gei~v~g~~v~~gY~~~~~ 408 (409)
|+| ++|++++ +|+ .|||+++|++++.||++++.
T Consensus 306 i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~ 340 (471)
T PRK07787 306 LVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPD 340 (471)
T ss_pred EEC-CCCCCCCCCCCCceEEEEECcccchhhcCChh
Confidence 999 6788887 454 89999999999999998864
No 97
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.8e-45 Score=365.52 Aligned_cols=360 Identities=21% Similarity=0.296 Sum_probs=279.2
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
.+|....+...+..+ |+++|++++ +.++||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||+
T Consensus 19 ~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~la~~ 91 (567)
T PLN02479 19 ALTPLWFLERAAVVH----PTRKSVVHG--SVRYTWAQTYQRCRRLASALAK-RSIGPGSTVAVIAPNIPAMYEAHFGVP 91 (567)
T ss_pred ccCHHHHHHHHHhhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 477888888888888 999999987 6899999999999999999999 999999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc------------CC-eEEEeCCC--------------
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------------KH-RTILIDSP-------------- 169 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------------~~-~~~~~~~~-------------- 169 (409)
++|++++|+++..+.+++.++++++++++++++++..+...+. .. .++.....
T Consensus 92 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
T PLN02479 92 MAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKG 171 (567)
T ss_pred hCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccC
Confidence 9999999999999999999999999999999988754432210 01 12222110
Q ss_pred --cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHH
Q 015325 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (409)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 247 (409)
.+.++....... .........++.++++|||||||.||+|++||+++..........+ .+..++++++..|++|.+
T Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~ 249 (567)
T PLN02479 172 AIEYEKFLETGDPE-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-GMNEGAVYLWTLPMFHCN 249 (567)
T ss_pred cccHHHHHhccccc-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-CCCCCCEEEEecchhhhh
Confidence 112221111100 0001122234677899999999999999999999876655554455 578889999999999999
Q ss_pred hHHHHHH-HHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCC-CCCCCcceeeecCCCCCHHHHH
Q 015325 248 GLFFCFR-AAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG-YDLSSLETVACGAAPLGKDTIM 325 (409)
Q Consensus 248 g~~~~~~-~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~-~~l~~Lr~v~~~G~~~~~~~~~ 325 (409)
++...+. .+..|. .++...+++..+++.++++++|++.++|+++..|.+...... ..++++|.++++|+++++.+.+
T Consensus 250 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~ 328 (567)
T PLN02479 250 GWCFTWTLAALCGT-NICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLF 328 (567)
T ss_pred hHHHHHHHHhhcCc-eEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHH
Confidence 8844443 445554 455567899999999999999999999999999987643322 2568899999999999999999
Q ss_pred HHHHhCCCCceecccCcccccceecccCC-C-------CC-CCCCCccccccCCce-EEEecCCCCCCCCCC--CcceEE
Q 015325 326 AFASKFPKVVLVQAYGLTESTAGVFRTVG-P-------DE-CRRWGSTGRLSAGLE-AKIVDPETGDSLPPG--KEGELS 393 (409)
Q Consensus 326 ~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~-------~~-~~~~~s~G~p~~~~~-v~i~d~~~g~~~~~g--~~Gei~ 393 (409)
+|++. +.++++.||+||+++.++.... . .. .....+.|.+.+|++ ++|+|++++++++.+ +.|||+
T Consensus 329 ~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~ 406 (567)
T PLN02479 329 AMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIV 406 (567)
T ss_pred HHHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEE
Confidence 99875 7899999999998654332110 0 00 011245788888886 899997788988764 679999
Q ss_pred EecCccccccCCCCC
Q 015325 394 IRGPTIMKGIFLPHF 408 (409)
Q Consensus 394 v~g~~v~~gY~~~~~ 408 (409)
++|++++.|||+++.
T Consensus 407 v~g~~~~~GY~~~~~ 421 (567)
T PLN02479 407 MRGNMVMKGYLKNPK 421 (567)
T ss_pred EeccchhhhhhcCcc
Confidence 999999999999875
No 98
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-45 Score=369.55 Aligned_cols=356 Identities=19% Similarity=0.231 Sum_probs=285.1
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
....|+.+.|.+.+.++ |+++|++++ ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+.+++++++|
T Consensus 34 ~~~~tl~~~l~~~a~~~----p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~V~i~~~n~~~~v~~~lA 106 (600)
T PRK08279 34 DSKRSLGDVFEEAAARH----PDRPALLFE--DQSISYAELNARANRYAHWAAA-RGVGKGDVVALLMENRPEYLAAWLG 106 (600)
T ss_pred CCcccHHHHHHHHHHhC----CCCcEEEeC--CCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHH
Confidence 44589999999999999 999999998 7899999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-----C-eEEEeCC------CcchhhhcccCCcc
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----H-RTILIDS------PEFDSMTMSWNSKH 182 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~------~~~~~~~~~~~~~~ 182 (409)
|+++|++++++++..+.+++.++++.++++++|++.+....+.... . .++..+. ..+.++........
T Consensus 107 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 107 LAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAP 186 (600)
T ss_pred HHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCC
Confidence 9999999999999999999999999999999999987665544221 1 1222211 11222221111100
Q ss_pred ---cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHh
Q 015325 183 ---ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (409)
Q Consensus 183 ---~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~ 258 (409)
.........+++++|+|||||||.||+|++||+++...+......+ .+.+.|++++.+|++|.+++ ..++.++..
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 265 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-RLTPDDVLYCCLPLYHNTGGTVAWSSVLAA 265 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-CCCCCcEEEEecCchhhhhHHHHHHHHHhc
Confidence 1112234568899999999999999999999999999988877777 78999999999999999999 566778889
Q ss_pred CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceec
Q 015325 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (409)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 338 (409)
|+++++.+.+++..+++.++++++|++.++|+++..+............++|.+ +|+.++++++++|.+.|+...+++
T Consensus 266 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 266 GATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 999999999999999999999999999999999999988654444345667754 478899999999999996667999
Q ss_pred ccCcccccceecccCCCCCCCCCCccccccC----CceEE---------EecCCCC--CCCCCCCcceEE--EecCcccc
Q 015325 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSA----GLEAK---------IVDPETG--DSLPPGKEGELS--IRGPTIMK 401 (409)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~----~~~v~---------i~d~~~g--~~~~~g~~Gei~--v~g~~v~~ 401 (409)
.||+||++...+. .....+++|.+.+ +..+. +.+ .++ .++++|+.|||+ ++|++++.
T Consensus 344 ~YG~tE~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 FYAASEGNVGFIN-----VFNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDRGPFD 417 (600)
T ss_pred eecccccceeecc-----cCCCCcccccccccccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCccccc
Confidence 9999998754332 1234567777665 33332 333 222 357899999998 78999999
Q ss_pred ccCCCC
Q 015325 402 GIFLPH 407 (409)
Q Consensus 402 gY~~~~ 407 (409)
|| +++
T Consensus 418 GY-~~~ 422 (600)
T PRK08279 418 GY-TDP 422 (600)
T ss_pred cc-CCc
Confidence 99 654
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.7e-45 Score=360.92 Aligned_cols=360 Identities=27% Similarity=0.409 Sum_probs=290.2
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.|...++++ |+++|+++. ++.+||.||.++++++|..|+++.|+++|++|+++++|++++++++|||++
T Consensus 23 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 23 QSLVDMFEQAVARY----ADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred ccHHHHHHHHHHhC----CCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57899999888888 999999987 789999999999999999998327999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----CCeEEEeCC--Cc---------------------
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDS--PE--------------------- 170 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~--~~--------------------- 170 (409)
+|++++|+++..+.+++.++++++++++++++++....+.+. ....+.... ..
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVP 176 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccc
Confidence 999999999999999999999999999999987644433221 111111100 00
Q ss_pred ---------chhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC--CCCCCCEEEE
Q 015325 171 ---------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLF 239 (409)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~ 239 (409)
+.+...... ..........++++++++|||||||.||+|.++|+++..........+. .....+.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 177 KYHLPDAISFRSALHKGR-RMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred cccCCCcccHHHHhhccC-CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 000000000 0001112245689999999999999999999999999876654433221 2345678889
Q ss_pred eCchhhHHhH-HHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCC
Q 015325 240 TMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (409)
Q Consensus 240 ~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~ 317 (409)
.+|++|.+++ ...+..+..|+++++.. ..++..++..++++++|.+.++|+++..+..........+++||.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 9999999887 55777888999877764 467899999999999999999999999998876555566789999999999
Q ss_pred CCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecC
Q 015325 318 PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (409)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~ 397 (409)
++++.+.++|++.+ ++++++.||+||++..++... .......+++|.|+|+++++|+| +++++++.|+.|||+++|+
T Consensus 336 ~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~ 412 (560)
T PRK08974 336 AVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNP-YDLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGP 412 (560)
T ss_pred cCCHHHHHHHHHHh-CCcEEeeecccccCceeeccC-CCCcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecC
Confidence 99999999999988 899999999999987665432 22234467899999999999999 6899999999999999999
Q ss_pred ccccccCCCC
Q 015325 398 TIMKGIFLPH 407 (409)
Q Consensus 398 ~v~~gY~~~~ 407 (409)
.++.||++++
T Consensus 413 ~~~~gy~~~~ 422 (560)
T PRK08974 413 QVMLGYWQRP 422 (560)
T ss_pred CcchhhcCCh
Confidence 9999999875
No 100
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.7e-45 Score=350.36 Aligned_cols=331 Identities=24% Similarity=0.271 Sum_probs=278.0
Q ss_pred eHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
||.||.+.++++|+.|.++.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999999657999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC
Q 015325 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (409)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~ 230 (409)
+....+................ ...... ...........+++++++|||||||.||+|.+||+++..........+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~-~ 157 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELA-ALDDAP-APPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRY-G 157 (408)
T ss_pred chhhhccccCCceEEechhhhh-hccccc-ccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhc-C
Confidence 8777665443333333211111 111110 001111113468899999999999999999999999999888888777 6
Q ss_pred CCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCC
Q 015325 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (409)
Q Consensus 231 ~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~---~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~ 307 (409)
..+.|++++..|++|.+++..++.++..|+++++.+... +..+...++++++|.+.++|.+++.+.+... ..++
T Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~ 234 (408)
T TIGR01733 158 LDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALA 234 (408)
T ss_pred CCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hccc
Confidence 888999999999999999999999999999999987643 6899999999999999999999999998754 4578
Q ss_pred CcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCC-CCCCC--CCCccccccCCceEEEecCCCCCCC
Q 015325 308 SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG-PDECR--RWGSTGRLSAGLEAKIVDPETGDSL 384 (409)
Q Consensus 308 ~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~-~~~~~--~~~s~G~p~~~~~v~i~d~~~g~~~ 384 (409)
+||.+++||+++++++.++|++.++++.+++.||+||++..+..... ..... ++.++|+|+++++++|+| ++++++
T Consensus 235 ~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~ 313 (408)
T TIGR01733 235 SLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD-DDLRPV 313 (408)
T ss_pred CceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-CCCCCC
Confidence 99999999999999999999999966999999999999876643221 11111 267899999999999999 559999
Q ss_pred CCCCcceEEEecCccccccCCCCC
Q 015325 385 PPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 385 ~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++|+.|||+++|++++.||++++.
T Consensus 314 ~~g~~Gel~v~~~~~~~gy~~~~~ 337 (408)
T TIGR01733 314 PVGVVGELYIGGPGVARGYLNRPE 337 (408)
T ss_pred CCCCceEEEecCccccccccCChh
Confidence 999999999999999999998753
No 101
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-45 Score=363.36 Aligned_cols=358 Identities=18% Similarity=0.227 Sum_probs=280.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCC--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
.++.+.|...++++ |+.+ +++...+ +.+||.||++++.++|++|++ .|+++||+|+++++|+++++++++||
T Consensus 21 ~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~ 94 (579)
T PRK09192 21 PTLVEALDYAALGE----AGMN-FYDRRGQLEEALPYQTLRARAEAGARRLLA-LGLKPGDRVALIAETDGDFVEAFFAC 94 (579)
T ss_pred hhHHHHHHHhhccC----CceE-EEecCCCEEEEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCchhHHHHHHHH
Confidence 58999999999887 7555 4453222 679999999999999999999 99999999999999999999999999
Q ss_pred HHhCCeEccCCCCCC-------HHHHHHHHhhcCCeEEEEcCchHHHHhhc--CCeEEEeCCCcchhhhcccCCcccccc
Q 015325 116 LSLGVIISPANPVNT-------ESEISRQIQLSNPVIAFATSSVVHKLAKL--KHRTILIDSPEFDSMTMSWNSKHELDR 186 (409)
Q Consensus 116 ~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
+++|++++++++..+ .+++.++++.+++++++++....+.+... ......+ ..+..+...... ....
T Consensus 95 ~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 170 (579)
T PRK09192 95 QYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHV--LSHAWFKALPEA--DVAL 170 (579)
T ss_pred HHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccce--eehhhhcccCCC--cccc
Confidence 999999999986433 68999999999999999998766554432 1111111 112222211111 1112
Q ss_pred cccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc-cCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEE
Q 015325 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVV 264 (409)
Q Consensus 187 ~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~ 264 (409)
....++++++++|||||||.||+|.++|+++...+..... .+ +..+.|+++..+|++|.+++ ..++.++..|+++++
T Consensus 171 ~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~ 249 (579)
T PRK09192 171 PRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDY 249 (579)
T ss_pred CCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEe
Confidence 2345688999999999999999999999999988877776 55 68889999999999999998 456778899999977
Q ss_pred ecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC---CCCCCCCCcceeeecCCCCCHHHHHHHHHhCC--C--
Q 015325 265 MQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS---TDGYDLSSLETVACGAAPLGKDTIMAFASKFP--K-- 333 (409)
Q Consensus 265 ~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~---~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~--~-- 333 (409)
.+. .++..++..+.+++++++...|..+..+..... ....++++||.+++||+++++.+.++|.+.++ +
T Consensus 250 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~ 329 (579)
T PRK09192 250 LPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFD 329 (579)
T ss_pred eCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCC
Confidence 752 368899999999999987776655555543321 23356789999999999999999999999873 1
Q ss_pred -CceecccCcccccceecccCCCCC--------------------------CCCCCccccccCCceEEEecCCCCCCCCC
Q 015325 334 -VVLVQAYGLTESTAGVFRTVGPDE--------------------------CRRWGSTGRLSAGLEAKIVDPETGDSLPP 386 (409)
Q Consensus 334 -~~i~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~s~G~p~~~~~v~i~d~~~g~~~~~ 386 (409)
..+++.||+||+++.++....... .....++|+|+|+++++|+| +++++++.
T Consensus 330 ~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~ 408 (579)
T PRK09192 330 DKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPE 408 (579)
T ss_pred hhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCC
Confidence 358999999999765554221110 01125789999999999999 78999999
Q ss_pred CCcceEEEecCccccccCCCC
Q 015325 387 GKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 387 g~~Gei~v~g~~v~~gY~~~~ 407 (409)
|+.|||+++|++++.|||+++
T Consensus 409 g~~Gel~i~g~~~~~gY~~~~ 429 (579)
T PRK09192 409 RVVGHICVRGPSLMSGYFRDE 429 (579)
T ss_pred CCEEEEEecCCchhhhhcCCc
Confidence 999999999999999999984
No 102
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-45 Score=364.26 Aligned_cols=356 Identities=21% Similarity=0.281 Sum_probs=272.6
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCC-------CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~ 110 (409)
+++.+.|.+.+..+ |+++|+++.+ ..+++||.||.++++++|++|++ .| ++||+|+++++|++++++
T Consensus 1 ~s~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-~g-~~gd~V~l~~~n~~~~~~ 74 (578)
T PRK05850 1 SSVPSLLRERASLQ----PDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-HG-STGDRAVILAPQGLEYIV 74 (578)
T ss_pred CcHHHHHHHHHhcC----CCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCcccHHH
Confidence 46778888888888 9999998632 12689999999999999999999 89 689999999999999999
Q ss_pred HHHHHHHhCCeEccCCC---CCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-------CC-eEEEeCCCcchhhhcccC
Q 015325 111 LYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KH-RTILIDSPEFDSMTMSWN 179 (409)
Q Consensus 111 ~~~A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 179 (409)
+++||+++|++++|+++ ..+.+++.++++++++++++++++....+... .. .++..+...+. ..
T Consensus 75 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 149 (578)
T PRK05850 75 AFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDLD---SP-- 149 (578)
T ss_pred HHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccccc---cC--
Confidence 99999999999999997 55789999999999999999998766655421 01 11111111100 00
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC-C----CCCCCCEEEEeCchhhHHhH-HHHH
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-P----KRVSPAVMLFTMPYFHIYGL-FFCF 253 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-~----~~~~~d~~l~~~p~~~~~g~-~~~~ 253 (409)
. ........++++++++|||||||.||||.+||++++..+....... . .....+++++..|++|.+|+ ..++
T Consensus 150 -~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 227 (578)
T PRK05850 150 -R-GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVC 227 (578)
T ss_pred -C-ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHH
Confidence 0 1111234568999999999999999999999999987765543322 0 13567899999999999998 6789
Q ss_pred HHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHH-HHHHhCC---CCCCCCCCCcceeeecCCCCCHHHHH
Q 015325 254 RAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIV-VAMSKGG---STDGYDLSSLETVACGAAPLGKDTIM 325 (409)
Q Consensus 254 ~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l-~~l~~~~---~~~~~~l~~Lr~v~~~G~~~~~~~~~ 325 (409)
.++..|+++++.+. .++..++..+++++++.. .+|..+ ..+.... .....+++++|.+++||+++++++.+
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~ 306 (578)
T PRK05850 228 APILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLK 306 (578)
T ss_pred HHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHH
Confidence 99999999999864 278999999999999865 556544 3333221 11234578899999999999999999
Q ss_pred HHHHhCC-----CCceecccCcccccceecccCCCCC-----------------------CCCCCccccccCCceEEEec
Q 015325 326 AFASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-----------------------CRRWGSTGRLSAGLEAKIVD 377 (409)
Q Consensus 326 ~~~~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~~-----------------------~~~~~s~G~p~~~~~v~i~d 377 (409)
+|.+.|+ +..+++.||+||++..+........ .....++|.|. +.+++|+|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd 385 (578)
T PRK05850 307 RFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVD 385 (578)
T ss_pred HHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEc
Confidence 9998872 3579999999998754432111000 00012345554 57899999
Q ss_pred CCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 378 PETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 378 ~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
++++++++.|+.|||+|+|+.++.|||+++.
T Consensus 386 ~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~ 416 (578)
T PRK05850 386 PDTCIECPAGTVGEIWVHGDNVAAGYWQKPE 416 (578)
T ss_pred CCCCcCCCCCCEEEEEEecCcccccccCChh
Confidence 8889999999999999999999999999874
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-44 Score=352.44 Aligned_cols=341 Identities=23% Similarity=0.267 Sum_probs=275.5
Q ss_pred CCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 56 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
|+++|+++..+++.+||.||.++++++|+.|++ .|+++|++|+++++|+++++++++||+++|++++++++..+.+++.
T Consensus 11 p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~~~~~l~ 89 (511)
T PRK13391 11 PDKPAVIMASTGEVVTYRELDERSNRLAHLFRS-LGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHLTPAEAA 89 (511)
T ss_pred CCceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccccCHHHHH
Confidence 999999985557889999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCchHHHHhhc----C-C-eEEEeCC-C---c---chhhhcccCCcccccccccCCCCEEEEEcCCC
Q 015325 136 RQIQLSNPVIAFATSSVVHKLAKL----K-H-RTILIDS-P---E---FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSG 202 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~~~~~~~~----~-~-~~~~~~~-~---~---~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 202 (409)
++++.+++++++++........+. . . ..+.... . . +.+.... .........++.++++||||
T Consensus 90 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~il~TSG 164 (511)
T PRK13391 90 YIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-----LPATPIADESLGTDMLYSSG 164 (511)
T ss_pred HHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC-----CCCCCCCCcccccEEEECCC
Confidence 999999999999998665443321 1 1 1122211 0 0 1111110 00111123345789999999
Q ss_pred CCCCcchhhh--ccHHHHH---HHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHH
Q 015325 203 TTGRVKGVML--THRNLTA---AVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (409)
Q Consensus 203 TTG~pK~v~~--s~~~l~~---~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i 277 (409)
|||.||+|.+ +|.++.. ........+ ...+.+++++..|++|.+++...+.++..|+++++.+.+++..+++.+
T Consensus 165 tTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i 243 (511)
T PRK13391 165 TTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-GFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYLALI 243 (511)
T ss_pred CCCCCCEEEEccccchhhhhhHHHHHHHHhc-CCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHHHHH
Confidence 9999999995 4555432 223333444 567889999999999999987778899999999999989999999999
Q ss_pred HHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCC
Q 015325 278 EEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP 355 (409)
Q Consensus 278 ~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~ 355 (409)
+++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+++++.+ +..+++.||+||++..... ...
T Consensus 244 ~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~-~~~ 321 (511)
T PRK13391 244 EEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTAC-DSE 321 (511)
T ss_pred HHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEEe-cCc
Confidence 99999999999999998887543 2344578999999999999999999999988 7889999999999875543 222
Q ss_pred CCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 356 DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 356 ~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.....++++|+|+++ +++|+| ++|++++.|+.|||+++|+ ++.|||+++.
T Consensus 322 ~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~ 371 (511)
T PRK13391 322 EWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPA 371 (511)
T ss_pred cccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChh
Confidence 223456789999999 699999 8999999999999999999 8999999764
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.9e-44 Score=383.90 Aligned_cols=355 Identities=19% Similarity=0.246 Sum_probs=286.7
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~ 116 (409)
..++.+.+.+.+++++ |++.++.+. +++++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+
T Consensus 630 ~~~~~~~l~~~~~~~~---~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~--g~~~gd~V~i~~~n~~~~~~~~la~~ 703 (1140)
T PRK06814 630 DRTLFEALIEAAKIHG---FKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK--NTPPGENVGVMLPNANGAAVTFFALQ 703 (1140)
T ss_pred cCCHHHHHHHHHHHcC---CCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH
Confidence 4667788888888772 456777653 36789999999999999999964 99999999999999999999999999
Q ss_pred HhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHH------hhc--CCeEEEeCCCc-----chhhhcccC-Ccc
Q 015325 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL------AKL--KHRTILIDSPE-----FDSMTMSWN-SKH 182 (409)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~------~~~--~~~~~~~~~~~-----~~~~~~~~~-~~~ 182 (409)
++|++++++++..+.+++.++++++++++++++++..... .+. ..+++.++... ++.+..... ...
T Consensus 704 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1140)
T PRK06814 704 SAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFP 783 (1140)
T ss_pred HCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCC
Confidence 9999999999999999999999999999999987644321 111 22333333110 000000000 000
Q ss_pred cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCe
Q 015325 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (409)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~ 261 (409)
........++|+++++|||||||.||+|.+||+++..........+ ...++|++++.+|++|.+++ ..++.++..|++
T Consensus 784 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 862 (1140)
T PRK06814 784 LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVK 862 (1140)
T ss_pred ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCE
Confidence 1111134678999999999999999999999999998888877777 68899999999999999998 788999999999
Q ss_pred EEEecC-CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceeccc
Q 015325 262 AVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (409)
Q Consensus 262 ~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 340 (409)
+++.+. .+...+.+.++++++|++.++|++++.+.+.. ...+++++|.+++||+++++++.++|++.+ +.++++.|
T Consensus 863 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~Y 939 (1140)
T PRK06814 863 VFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGY 939 (1140)
T ss_pred EEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEecc
Confidence 998864 56788899999999999999999999988753 345678999999999999999999999998 89999999
Q ss_pred CcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
|+||++..++.. .......+++|+|+|++++++++ ..+ .|+.|||+++|++++.|||+++.
T Consensus 940 G~TE~~~~~~~~--~~~~~~~~~vG~p~~g~~~~~~~-~~~----~~~~Gel~v~g~~~~~gY~~~~~ 1000 (1140)
T PRK06814 940 GVTETAPVIALN--TPMHNKAGTVGRLLPGIEYRLEP-VPG----IDEGGRLFVRGPNVMLGYLRAEN 1000 (1140)
T ss_pred ccccccceEEec--CCCCCCCCcCCccCCCCeEEEee-cCC----CCCceEEEEeCCCcchhhcCCCC
Confidence 999998766542 22334567999999999999987 433 36789999999999999998753
No 105
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.3e-44 Score=352.25 Aligned_cols=355 Identities=22% Similarity=0.289 Sum_probs=282.5
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
+|+.++|.+.++++ |+++|++++ ++.+||.||.++++++|+.|.+ .|+++||+|+++++|++++++++|||++
T Consensus 3 ~~l~~~~~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~-~g~~~~~~v~v~~~n~~~~~~~~~a~~~ 75 (533)
T PRK07798 3 WNIADLFEAVADAV----PDRVALVCG--DRRLTYAELEERANRLAHYLIA-QGLGPGDHVGIYARNRIEYVEAMLGAFK 75 (533)
T ss_pred ccHHHHHHHHHHhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 68999999999999 999999997 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcC-----C-eEEEeCCC----------cchhhhcccCCc
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----H-RTILIDSP----------EFDSMTMSWNSK 181 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~----------~~~~~~~~~~~~ 181 (409)
+|++++++++.++.+++.++++++++++++++.+....+.+.. . .++.++.. .++++......
T Consensus 76 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 76 ARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCC-
Confidence 9999999999999999999999999999999987655554321 1 12222211 22232222111
Q ss_pred ccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC--------------CCCCCCEEEEeCchhhHH
Q 015325 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--------------KRVSPAVMLFTMPYFHIY 247 (409)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--------------~~~~~d~~l~~~p~~~~~ 247 (409)
. ........+.++++|||||||.||+|+++|+++..........+. ....+++++...|++|..
T Consensus 155 -~-~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 155 -E-RDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred -c-CCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 1 111122344579999999999999999999998765443222110 115678999999999999
Q ss_pred hHHHHHHHHHhCCeEEEec--CCCHHHHHHHHHHhcceeEeechHHHH-HHHhCCC-CCCCCCCCcceeeecCCCCCHHH
Q 015325 248 GLFFCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVV-AMSKGGS-TDGYDLSSLETVACGAAPLGKDT 323 (409)
Q Consensus 248 g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~p~~l~-~l~~~~~-~~~~~l~~Lr~v~~~G~~~~~~~ 323 (409)
+++.++.++..|+++++.+ .+++..++..++++++|.+.++|..+. .+.+... ....+++++|.+++||+++++++
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 233 GQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred hHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9988999999999999998 789999999999999999999986553 3333322 23446789999999999999999
Q ss_pred HHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccc--cccCCceEEEecCCCCCCCCCCCc--ceEEEecCcc
Q 015325 324 IMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG--RLSAGLEAKIVDPETGDSLPPGKE--GELSIRGPTI 399 (409)
Q Consensus 324 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G--~p~~~~~v~i~d~~~g~~~~~g~~--Gei~v~g~~v 399 (409)
.++|++.+++..+++.||+||++...+.. ... .....| .+.++..++|+| ++|+++++|+. |+|+ +++.+
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~-~~~---~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~ 386 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGT-VAK---GAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHI 386 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccC-CCC---CCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCc
Confidence 99999999889999999999986544431 111 122334 788999999999 78889999988 6665 66789
Q ss_pred ccccCCCCC
Q 015325 400 MKGIFLPHF 408 (409)
Q Consensus 400 ~~gY~~~~~ 408 (409)
+.|||+++.
T Consensus 387 ~~gy~~~~~ 395 (533)
T PRK07798 387 PLGYYKDPE 395 (533)
T ss_pred cccccCChh
Confidence 999999863
No 106
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-44 Score=352.40 Aligned_cols=360 Identities=22% Similarity=0.283 Sum_probs=281.9
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
++..+.|.+.++.+ |+++|++++ +..+||+||.+++.++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 18 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~ 90 (545)
T PRK08162 18 LTPLSFLERAAEVY----PDRPAVIHG--DRRRTWAETYARCRRLASALAR-RGIGRGDTVAVLLPNIPAMVEAHFGVPM 90 (545)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 78889999999888 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc----C-CeEEEeCC--C-----------cchhhhcccC
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K-HRTILIDS--P-----------EFDSMTMSWN 179 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~-~~~~~~~~--~-----------~~~~~~~~~~ 179 (409)
+|++++|+++..+.+++.++++.+++++++++.+....+.+. . .+.+.++. . .+.++.....
T Consensus 91 ~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (545)
T PRK08162 91 AGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGD 170 (545)
T ss_pred hCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCC
Confidence 999999999999999999999999999999998776554321 1 11222211 1 1222221111
Q ss_pred CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhC
Q 015325 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALM 259 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G 259 (409)
.. .......+..++++++|||||||.||+|+++|+++........... .+...+++++.+|++|.+++...+.....|
T Consensus 171 ~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~ 248 (545)
T PRK08162 171 PD-FAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-GMPKHPVYLWTLPMFHCNGWCFPWTVAARA 248 (545)
T ss_pred cc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeeEeccCcHhhhhHHHHHHHHHHc
Confidence 00 0011122345789999999999999999999998876665554444 567888999999999999884444455567
Q ss_pred CeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecc
Q 015325 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (409)
Q Consensus 260 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 339 (409)
++.++...+++..+++.++++++|++.++|+++..|++........+.+++.++++|+.+++++.+.+++. ++++++.
T Consensus 249 g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 326 (545)
T PRK08162 249 GTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHV 326 (545)
T ss_pred cEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeec
Confidence 77777777899999999999999999999999999998755433445567778899999999999998874 8999999
Q ss_pred cCcccccceecccCCCCC---------CCCCCccccccCCc-eEEEecCCCCCCCCCC--CcceEEEecCccccccCCCC
Q 015325 340 YGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGL-EAKIVDPETGDSLPPG--KEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 340 yG~tE~~~~~~~~~~~~~---------~~~~~s~G~p~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~g~~v~~gY~~~~ 407 (409)
||+||+++.++....... .....++|.+.+.. .++|+|++++++++.+ +.|||+++|+.++.|||+++
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCCh
Confidence 999998654443211110 11234567776543 6889997789999763 46999999999999999986
Q ss_pred C
Q 015325 408 F 408 (409)
Q Consensus 408 ~ 408 (409)
.
T Consensus 407 ~ 407 (545)
T PRK08162 407 K 407 (545)
T ss_pred h
Confidence 4
No 107
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.6e-44 Score=349.39 Aligned_cols=332 Identities=27% Similarity=0.310 Sum_probs=271.2
Q ss_pred CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 015325 66 TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (409)
Q Consensus 66 ~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (409)
.++.+||.||.++++++|++|++ .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++.++++++++++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRA-LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 38999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCchHHHHhhc------CCeEEEeCCC------cchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhc
Q 015325 146 AFATSSVVHKLAKL------KHRTILIDSP------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLT 213 (409)
Q Consensus 146 ii~~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s 213 (409)
+++++.......+. ..+.+..... .+.+..... ........++.++++|||||||.||+|.++
T Consensus 87 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~ 161 (502)
T PRK08276 87 LIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQ-----PDTPIADETAGADMLYSSGTTGRPKGIKRP 161 (502)
T ss_pred EEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcC-----CCCCCCCCCcceEEEECCCCCCCCceEEEc
Confidence 99988766554322 2222222211 122211111 111123456789999999999999999988
Q ss_pred cHHHHHHH------HHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEee
Q 015325 214 HRNLTAAV------ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 214 ~~~l~~~~------~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~ 287 (409)
|.++.... ....... ....++++++..|++|.+++...+.++..|+++++.+.+++..+++.++++++|++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 240 (502)
T PRK08276 162 LPGLDPDEAPGMMLALLGFGM-YGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQL 240 (502)
T ss_pred cCCcchhhhhHHhhhhhhhcc-cCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEe
Confidence 87654322 1122222 2357789999999999999877778999999999999899999999999999999999
Q ss_pred chHHHHHHHhCCC--CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccc
Q 015325 288 TPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG 365 (409)
Q Consensus 288 ~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G 365 (409)
+|+++..+.+... ....+++++|.+++||++++.++.+++.+.+ +..+++.||+||++..++.. ........+++|
T Consensus 241 ~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~-~~~~~~~~~~~G 318 (502)
T PRK08276 241 VPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVIT-SEDWLAHPGSVG 318 (502)
T ss_pred hHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEec-CccccccCCCcc
Confidence 9999999988654 2345678999999999999999999999988 88899999999998755442 222234567899
Q ss_pred cccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 366 RLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 366 ~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
+|+ +++++|+| +++++++.|+.|||+++|+.++.|||+++.
T Consensus 319 ~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 359 (502)
T PRK08276 319 KAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPE 359 (502)
T ss_pred eec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHH
Confidence 999 88999999 789999999999999999999999999863
No 108
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-43 Score=348.99 Aligned_cols=338 Identities=26% Similarity=0.308 Sum_probs=274.3
Q ss_pred cEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHH
Q 015325 59 VALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQI 138 (409)
Q Consensus 59 ~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l 138 (409)
.|++++ ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++++++++|++++|++++++++..+.+++.+++
T Consensus 3 ~~~~~~--~~~~Ty~el~~~~~~la~~l~~-~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 79 (509)
T PRK12406 3 ATIISG--DRRRSFDELAQRAARAAGGLAA-LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYIL 79 (509)
T ss_pred eEEEEC--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHH
Confidence 366666 7899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEcCchHHHHhhc---CCeEEEeCCC---------------------cchhhhcccCCcccccccccCCCCE
Q 015325 139 QLSNPVIAFATSSVVHKLAKL---KHRTILIDSP---------------------EFDSMTMSWNSKHELDRAKVCQSDV 194 (409)
Q Consensus 139 ~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (409)
+.+++++++++......+.+. ....+..... ++++.... .........+++
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 154 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQ-----QEPYDGPPVPQP 154 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcc-----cCccCCCCCCCc
Confidence 999999999988766544321 1122211110 01111100 001122346889
Q ss_pred EEEEcCCCCCCCcchhhhccHHH---HHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHH
Q 015325 195 AAIMYSSGTTGRVKGVMLTHRNL---TAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLK 271 (409)
Q Consensus 195 a~i~~TSGTTG~pK~v~~s~~~l---~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~ 271 (409)
++++|||||||.||+|.++|... ..........+ +...++++++..|++|..+....+.++..|+++++.+.+++.
T Consensus 155 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (509)
T PRK12406 155 QSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIY-GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPE 233 (509)
T ss_pred eEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhc-CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHH
Confidence 99999999999999999876543 33333344455 578899999999999988875666678899999998888999
Q ss_pred HHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCccccccee
Q 015325 272 MMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (409)
Q Consensus 272 ~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 349 (409)
.+++.++++++|.+.++|+++..+++... ....++++||.+++||+++++++.+++.+.+ ++.+++.||+||++..+
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceE
Confidence 99999999999999999999999987543 2345678999999999999999999999988 78999999999998755
Q ss_pred cccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCcccc-ccCCCCC
Q 015325 350 FRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMK-GIFLPHF 408 (409)
Q Consensus 350 ~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~-gY~~~~~ 408 (409)
+.. .......++++|+|+++++++|+| +++++++.|+.|||+++|+.++. ||++++.
T Consensus 313 ~~~-~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~ 370 (509)
T PRK12406 313 FAT-SEDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPE 370 (509)
T ss_pred ecC-cccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCch
Confidence 432 222334567899999999999999 78999999999999999998875 9998764
No 109
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=322.89 Aligned_cols=357 Identities=20% Similarity=0.238 Sum_probs=292.4
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.+.++++++ |+++|+++.+...++||+|+.++++++|+.|.. .|++.||+|++.|+|.++++.+++++++
T Consensus 77 ~ti~~~F~~~vrr~----p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-~~l~~GD~VAL~men~pefv~lWlGLaK 151 (649)
T KOG1179|consen 77 RTIAELFLSQVRRQ----PDKPAIIYEGPFQSLTFAELDARSNRVANYLHA-EGLKAGDVVALLMENRPEFVALWLGLAK 151 (649)
T ss_pred CcHHHHHHHHHHhC----CCccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-hhcccCCEEEEecCCChhHHHHHHhHHh
Confidence 89999999999999 999999999666899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-------CCeEEEeCC----Ccchhhhcc---cCCcc-
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHRTILIDS----PEFDSMTMS---WNSKH- 182 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~---~~~~~- 182 (409)
+|++...||+++..+.+.|.++.++++.+|++.+..+.+.+. ++..+..+. ...+++... ....+
T Consensus 152 lGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~v 231 (649)
T KOG1179|consen 152 LGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPV 231 (649)
T ss_pred hCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCC
Confidence 999999999999999999999999999999999887666543 233333321 122232222 11111
Q ss_pred -cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCC
Q 015325 183 -ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (409)
Q Consensus 183 -~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~ 260 (409)
.......+-.++++.+|||||||.||+.++||..+..........+ +++++|+++..+|++|..+. .++..++..|+
T Consensus 232 p~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~Ga 310 (649)
T KOG1179|consen 232 PVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-GMTADDVVYTTLPLYHSAAGILGIGGCLLHGA 310 (649)
T ss_pred CcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEcchhHHHHHHHHHHHHHHhcCc
Confidence 1222344557899999999999999999999999988887777888 89999999999999999888 89999999999
Q ss_pred eEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceeccc
Q 015325 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (409)
Q Consensus 261 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 340 (409)
|+|+-.+|+..++|+.+.+|+||++.-...+++.|++.+......-..+|..+ |..+.++++++|.++|.-.+|.+.|
T Consensus 311 T~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~Y 388 (649)
T KOG1179|consen 311 TVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFY 388 (649)
T ss_pred eEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEe
Confidence 99999999999999999999999999999999999999887766677888887 7779999999999999555699999
Q ss_pred CcccccceecccCCCCCCCCCCcccc------ccCCceEEEecCCCCCC----------CCCCCcceEEEe--cCcc---
Q 015325 341 GLTESTAGVFRTVGPDECRRWGSTGR------LSAGLEAKIVDPETGDS----------LPPGKEGELSIR--GPTI--- 399 (409)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~s~G~------p~~~~~v~i~d~~~g~~----------~~~g~~Gei~v~--g~~v--- 399 (409)
|+||.........+ ..+.+|+ -+--+++--+|+++|++ |++||+|.++-+ -..-
T Consensus 389 gaTEgn~~~~N~d~-----~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~ 463 (649)
T KOG1179|consen 389 GATEGNSNLVNYDG-----RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRS 463 (649)
T ss_pred ccccCcceeeeecC-----ccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhh
Confidence 99998776655322 2333333 22233444446566655 589999977543 2233
Q ss_pred ccccCCCC
Q 015325 400 MKGIFLPH 407 (409)
Q Consensus 400 ~~gY~~~~ 407 (409)
|.||.+++
T Consensus 464 F~GY~g~~ 471 (649)
T KOG1179|consen 464 FLGYAGPK 471 (649)
T ss_pred hccccCch
Confidence 88999854
No 110
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.8e-45 Score=329.80 Aligned_cols=372 Identities=24% Similarity=0.268 Sum_probs=300.9
Q ss_pred CCCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeC----------CCC-----------ceeeHHHHHHHHHHHHHHhH
Q 015325 29 IDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQ 87 (409)
Q Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~ 87 (409)
+-.++-+..-|+.+++.+...++ .++.++-.. .+| ..+||.|+++++..+|++|.
T Consensus 32 L~~~~~~g~~Tl~~~~~~~~~k~----g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~ 107 (678)
T KOG1180|consen 32 LVSPPNPGASTLYELFEECVKKF----GKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLV 107 (678)
T ss_pred ccCCCCCCcccHHHHHHHHHHhc----CCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHH
Confidence 33333344589999999999988 777777321 011 57899999999999999999
Q ss_pred hccCCCCCCE-EEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc-----CC
Q 015325 88 NVTRLSKNDT-AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH 161 (409)
Q Consensus 88 ~~~gv~~g~~-V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~ 161 (409)
+ .|++++++ ++|+++.+.+|+.+++||.+.+...|.+...+..+.+.+-|+++++..+|++.+.++.+... ..
T Consensus 108 ~-lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~v 186 (678)
T KOG1180|consen 108 K-LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTV 186 (678)
T ss_pred H-hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCce
Confidence 9 99997777 99999999999999999999999999999999999999999999999999999888766521 22
Q ss_pred e-EEEeCC--------------------CcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHH
Q 015325 162 R-TILIDS--------------------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA 220 (409)
Q Consensus 162 ~-~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~ 220 (409)
+ ++..+. .+++++...+.... .+..+..++|+|+|||||||||.||||+++|.|+++.
T Consensus 187 k~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~ 265 (678)
T KOG1180|consen 187 KHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAG 265 (678)
T ss_pred eEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhh
Confidence 2 223331 11444444444432 2333447799999999999999999999999999999
Q ss_pred HHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHH--------HHHHHHHhcceeEeechHHH
Q 015325 221 VASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKM--------MLKAVEEFRVTHAAVTPPIV 292 (409)
Q Consensus 221 ~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~--------~~~~i~~~~~t~l~~~p~~l 292 (409)
+..+....+.+.+.|+++..+|+.|++.+..-+.++.-|+.+-..+..+..+ --..+...|+|++.++|+.+
T Consensus 266 ~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~ 345 (678)
T KOG1180|consen 266 VTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVM 345 (678)
T ss_pred hhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHH
Confidence 9999888878999999999999999999988899999999998775422211 22335678999999999999
Q ss_pred HHHHhCCCCC-----------------------C---CC----------------CCCcceeeecCCCCCHHHHHHHHHh
Q 015325 293 VAMSKGGSTD-----------------------G---YD----------------LSSLETVACGAAPLGKDTIMAFASK 330 (409)
Q Consensus 293 ~~l~~~~~~~-----------------------~---~~----------------l~~Lr~v~~~G~~~~~~~~~~~~~~ 330 (409)
+++.+.-..+ . .. =.+||++++||++++++..+++.-+
T Consensus 346 drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic 425 (678)
T KOG1180|consen 346 DRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNIC 425 (678)
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHh
Confidence 8765532111 0 00 0479999999999999999999999
Q ss_pred CCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCC--cceEEEecCccccccCCCCC
Q 015325 331 FPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 331 ~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~--~Gei~v~g~~v~~gY~~~~~ 408 (409)
+ .+++.++||.||+++..+. ....+...+.+|.|++-++++++|-++|.-.+.+. .|||+|+|+++..|||+||.
T Consensus 426 ~-C~Pv~qGYGLTEtca~~tv--~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~e 502 (678)
T KOG1180|consen 426 F-CCPVLQGYGLTETCAAATV--LEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEE 502 (678)
T ss_pred c-cccccccccccchhcccEe--cChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChh
Confidence 9 8899999999999988776 34455667899999999999999988887777666 89999999999999999986
Q ss_pred C
Q 015325 409 E 409 (409)
Q Consensus 409 ~ 409 (409)
+
T Consensus 503 k 503 (678)
T KOG1180|consen 503 K 503 (678)
T ss_pred h
Confidence 4
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-43 Score=350.88 Aligned_cols=353 Identities=22% Similarity=0.284 Sum_probs=281.8
Q ss_pred CHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHh
Q 015325 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (409)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~ 118 (409)
++.+.|...+..+ |+++++.+.+....+||.||+++++++|++|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~la~~~~ 77 (545)
T PRK07768 3 RFTEKMYANARTS----PRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-AGVGPGDAVAVLAGAPVEIAPTAQGLWMR 77 (545)
T ss_pred hHHHHHHHHhhCC----CcceEEecCCCceEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHc
Confidence 4778888888888 999999887667889999999999999999999 99999999999999999999999999999
Q ss_pred CCeEccCCCCCCHHHH-------HHHHhhcCCeEEEEcCchHHHHhhc---CCeEEEeCCCcchhhhcccCCcccccccc
Q 015325 119 GVIISPANPVNTESEI-------SRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAK 188 (409)
Q Consensus 119 G~~~v~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (409)
|++++++++..+.+++ ..+++.++++.+++++......... ...++ .++++..... .....
T Consensus 78 g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~----~~~~~ 148 (545)
T PRK07768 78 GASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVL-----TVADLLAADP----IDPVE 148 (545)
T ss_pred CccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCcee-----ehhhhcccCC----CCcCC
Confidence 9999999988775544 4567788999999987654433221 11221 2223322111 11223
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCC-CEEEEeCchhhHHhH-HHHHHHHHhCCeEEEec
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSP-AVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~-d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~ 266 (409)
..++++++++|||||||.||+|+++|+++...+......+ ++... |++++.+|++|.+++ ..++.++..|+++++..
T Consensus 149 ~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 149 TGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-EFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-CCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 4578999999999999999999999999998887777766 56655 899999999999998 56778899999998885
Q ss_pred C----CCHHHHHHHHHHhcceeEeechHHHHHHHhCC----CCCCCCCCCcceeeecCCCCCHHHHHHHHHh---C--CC
Q 015325 267 R----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG----STDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PK 333 (409)
Q Consensus 267 ~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~----~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~---~--~~ 333 (409)
. .++..+...+++++++++...|..+..+.+.. .....++++||.++++|+++++.+.++|.+. + +.
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 307 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRP 307 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCc
Confidence 4 26788999999999999988787776655422 1224567899999999999999999999874 4 22
Q ss_pred CceecccCcccccceecccCCCC------------------------CCCCCCccccccCCceEEEecCCCCCCCCCCCc
Q 015325 334 VVLVQAYGLTESTAGVFRTVGPD------------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (409)
Q Consensus 334 ~~i~~~yG~tE~~~~~~~~~~~~------------------------~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~ 389 (409)
..+++.||+||++..++...... ......++|+|+++++++|+| ++|+++++|+.
T Consensus 308 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~ 386 (545)
T PRK07768 308 EAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGV 386 (545)
T ss_pred ccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCE
Confidence 35999999999987554322110 012346899999999999999 88999999999
Q ss_pred ceEEEecCccccccCCCC
Q 015325 390 GELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 390 Gei~v~g~~v~~gY~~~~ 407 (409)
|||+++|+.++.|||+++
T Consensus 387 Gel~v~~~~~~~gy~~~~ 404 (545)
T PRK07768 387 GVIELRGESVTPGYLTMD 404 (545)
T ss_pred EEEEEccCcccccccCCC
Confidence 999999999999999764
No 112
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-43 Score=365.06 Aligned_cols=345 Identities=15% Similarity=0.141 Sum_probs=269.8
Q ss_pred CCCCCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHH
Q 015325 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (409)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A 114 (409)
...+++.++|.+.++++ ||++|++++ ++++||+||.++++++|+.|++ .|+++||+|+|+++|+++++++++|
T Consensus 444 ~~~~sl~~ll~~~a~~~----pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~-~Gv~~Gd~VaI~~~n~~e~v~a~lA 516 (994)
T PRK07868 444 HTRISLGRIIAEQARDA----PKGEFLLFD--GRVHTYEAVNRRINNVVRGLIA-VGVRQGDRVGVLMETRPSALVAIAA 516 (994)
T ss_pred CCCccHHHHHHHHHHHC----CCCeEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34589999999999998 999999987 7899999999999999999999 9999999999999999999999999
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCc--------chhhhcc---cCCccc
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE--------FDSMTMS---WNSKHE 183 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~ 183 (409)
|+++|++++|++|. .++.++++.++++++|++.+....+......++.++... ....... ......
T Consensus 517 ~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (994)
T PRK07868 517 LSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVE 593 (994)
T ss_pred HHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCccccc
Confidence 99999999999985 689999999999999999877665554444455443210 0000000 000000
Q ss_pred c----cccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHH-HHHHHHh
Q 015325 184 L----DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF-CFRAAAL 258 (409)
Q Consensus 184 ~----~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~ 258 (409)
. ......++++++|+|| ||||.||++.++|.+...........+ .+.++|++++..|++|.+++.. ++.++..
T Consensus 594 ~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~g 671 (994)
T PRK07868 594 LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-ALDRRDTVYCLTPLHHESGLLVSLGGAVVG 671 (994)
T ss_pred CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-CCCCCCeEEEecChHHHhHHHHHHHHHhcc
Confidence 0 0011235789999998 577777777778776655444444455 5788999999999999999954 4555666
Q ss_pred CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceec
Q 015325 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (409)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 338 (409)
|+++++.+.++++.+++.|+++++|+++++|+++..|++.......++++||.++ |+.+++++.++|++.|+++++++
T Consensus 672 G~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~ 749 (994)
T PRK07868 672 GSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVE 749 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheee
Confidence 6666677789999999999999999999999999999987544445678899876 34499999999999997789999
Q ss_pred ccCcccccceecccCCCCCCCCCCccccccCCc-eEEEe-----------cCCCC--CCCCCCCcceEEEecCc
Q 015325 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIV-----------DPETG--DSLPPGKEGELSIRGPT 398 (409)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~-~v~i~-----------d~~~g--~~~~~g~~Gei~v~g~~ 398 (409)
.||+||++..... . ....++++|+|+||+ +++|. | ++| ++++.|+.|||+++|++
T Consensus 750 ~YG~TE~~~~~~~---~-~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d-~~G~~~~~~~ge~Gel~~~~~~ 818 (994)
T PRK07868 750 FFATTDGQAVLAN---V-SGAKIGSKGRPLPGAGRVELAAYDPEHDLILED-DRGFVRRAEVNEVGVLLARARG 818 (994)
T ss_pred eeecccccccccc---c-CCCCCcccCCccCCCCceeEEEecCcCCceeec-CCceEEEcCCCCceEEEEecCC
Confidence 9999998654332 1 124568999999998 67664 4 566 67889999999999984
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.8e-43 Score=339.07 Aligned_cols=320 Identities=20% Similarity=0.236 Sum_probs=264.6
Q ss_pred CHHHHHhhc-cCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 39 SAVDYVSSL-RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 39 ~~~~~l~~~-~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
++.+++... +.++ |+++|++++ ++.+||.||.++++++|+.|.+ .|+++|++|+++++|+++++++++||++
T Consensus 3 ~~~~~~~~~~a~~~----~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~v~l~~~~~~~~~~~~la~~~ 75 (458)
T PRK09029 3 IFSDWPWRHWAQVR----PQAIALRLN--DEVLTWQQLCARIDQLAAGFAQ-QGVVEGSGVALRGKNSPETLLAYLALLQ 75 (458)
T ss_pred hhhcChHHHHHHhC----CCceeeecC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 344445444 4556 999999987 7899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (409)
+|++++++++..+.+++.++++++++++++++.+... .... ... .+. ... ........+++++++
T Consensus 76 ~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~--~~~-----~~~---~~~----~~~~~~~~~~~~a~i 140 (458)
T PRK09029 76 CGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL--TSL-----HLQ---LVE----GAHAVAWQPQRLATM 140 (458)
T ss_pred cCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc--ccc-----ccc---ccc----ccCcccCCCCCeEEE
Confidence 9999999999999999999999999999999875432 1110 000 000 000 111234467889999
Q ss_pred EcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHH
Q 015325 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (409)
Q Consensus 198 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i 277 (409)
+|||||||.||+|.+||++++..+......+ ...++++++...|++|.+++..++.++..|+++++.+. ..++..+
T Consensus 141 ~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~~~~i 216 (458)
T PRK09029 141 TLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-PFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPLEQAL 216 (458)
T ss_pred EECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-CCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh---HHHHHHH
Confidence 9999999999999999999999888887777 68889999999999999998777888999999998864 4566666
Q ss_pred HHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCC
Q 015325 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (409)
Q Consensus 278 ~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 357 (409)
.++|.+.++|+++..++..... ..+||.+++||+++++.+.+++.+. +.++++.||+||++...+...
T Consensus 217 --~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~---- 284 (458)
T PRK09029 217 --AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKR---- 284 (458)
T ss_pred --hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccC----
Confidence 4899999999999999876432 3479999999999999999999864 899999999999986554321
Q ss_pred CCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 358 ~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
.....++|+|+++++++|+| |||+++|+.++.|||+++.
T Consensus 285 ~~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~ 323 (458)
T PRK09029 285 ADGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQ 323 (458)
T ss_pred CCCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCcc
Confidence 12235699999999999987 8999999999999998764
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.6e-43 Score=339.50 Aligned_cols=301 Identities=15% Similarity=0.168 Sum_probs=244.7
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (409)
.-+.|+||.++++++|+.|++ .|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~-~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~ 96 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQ-LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQI 96 (452)
T ss_pred eecChHHHHHHHHHHHHHHHH-hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEE
Confidence 357899999999999999999 988 579999999999999999999999999999999999999999999999999999
Q ss_pred EEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc
Q 015325 147 FATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA 226 (409)
Q Consensus 147 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~ 226 (409)
+++.+..... .. .. ........++++++++|||||||.||+|++||+++.........
T Consensus 97 i~~~~~~~~~---------~~-----~~--------~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~ 154 (452)
T PRK07445 97 WGLDQLKLSH---------PP-----PL--------PSQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQR 154 (452)
T ss_pred EecCcccccc---------CC-----CC--------CccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHH
Confidence 9876532110 00 00 00011234688999999999999999999999999888777766
Q ss_pred cCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCC
Q 015325 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDL 306 (409)
Q Consensus 227 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l 306 (409)
.+ ...+ ++.++.+|++|.+|+..++.++..|+++++.+..+.........++++|++.++|+++..+++.. ...+
T Consensus 155 ~~-~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l 229 (452)
T PRK07445 155 YF-QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWL 229 (452)
T ss_pred Hh-cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhh
Confidence 65 4444 46788999999999988889999999999986432233334455789999999999999998732 2346
Q ss_pred CCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCC
Q 015325 307 SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPP 386 (409)
Q Consensus 307 ~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~ 386 (409)
++||.+++||+++++++.+++++ + ++++++.||+||++..++............++|+|+|+++++|+ .
T Consensus 230 ~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~ 298 (452)
T PRK07445 230 AQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------A 298 (452)
T ss_pred hcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------C
Confidence 89999999999999999999876 4 88999999999997654432221112345789999999999997 3
Q ss_pred CCcceEEEecCccccccCCCC
Q 015325 387 GKEGELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 387 g~~Gei~v~g~~v~~gY~~~~ 407 (409)
|+.|||+|+|++++.|||+++
T Consensus 299 g~~Gel~v~g~~~~~gY~~~~ 319 (452)
T PRK07445 299 NQTGNITIQAQSLALGYYPQI 319 (452)
T ss_pred CCcceEEEeCCccchhhcCCc
Confidence 678999999999999999865
No 115
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.1e-42 Score=338.16 Aligned_cols=303 Identities=18% Similarity=0.217 Sum_probs=235.7
Q ss_pred cCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCch------HHHHh----hcCCeEEEeC--C-
Q 015325 102 STNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV------VHKLA----KLKHRTILID--S- 168 (409)
Q Consensus 102 ~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~----~~~~~~~~~~--~- 168 (409)
++|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. ...+. ......+.+. .
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 11111 1111222221 0
Q ss_pred ----------CcchhhhcccCCc----c-cccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCC
Q 015325 169 ----------PEFDSMTMSWNSK----H-ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (409)
Q Consensus 169 ----------~~~~~~~~~~~~~----~-~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 233 (409)
..+.++....... . ........++++++|+|||||||.||||++||++++.........+ ++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~ 159 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM-DIQP 159 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc-CCCC
Confidence 1223322111000 0 0011123468999999999999999999999999877665555555 5788
Q ss_pred CCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcc
Q 015325 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLE 310 (409)
Q Consensus 234 ~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr 310 (409)
+|++++..|++|.+++..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++... ....++++||
T Consensus 160 ~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr 239 (499)
T PLN03051 160 GDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLR 239 (499)
T ss_pred CCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhhe
Confidence 9999999999999998778899999999999874 788999999999999999999999999987643 3345678999
Q ss_pred eeeecCCCCCHHHHHHHHHhCC-CCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCC--
Q 015325 311 TVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-- 387 (409)
Q Consensus 311 ~v~~~G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g-- 387 (409)
.+++||+++++++.+++++.++ ++++++.||+||+++.++... .......+++|+|+++++++|+| ++|++++.|
T Consensus 240 ~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~-~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~ 317 (499)
T PLN03051 240 VFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISST-LLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQP 317 (499)
T ss_pred EEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccc-ccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCC
Confidence 9999999999999988877431 478999999999865443211 11233567899999999999999 899999998
Q ss_pred CcceEEEecCcc--ccccCCCC
Q 015325 388 KEGELSIRGPTI--MKGIFLPH 407 (409)
Q Consensus 388 ~~Gei~v~g~~v--~~gY~~~~ 407 (409)
+.|||+++||.+ +.||||++
T Consensus 318 ~~Gel~v~g~~~~~~~gy~~~~ 339 (499)
T PLN03051 318 CVGEVALAPPMLGASDRLLNAD 339 (499)
T ss_pred cceEEEEecCcCCCCccccCCc
Confidence 489999999976 58999865
No 116
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2e-41 Score=326.57 Aligned_cols=310 Identities=24% Similarity=0.316 Sum_probs=255.8
Q ss_pred eHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++++++..+.+++..++++.+++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 79 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDS 79 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999999 9999999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCC
Q 015325 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (409)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~ 230 (409)
...... +. ...+..+....... .........+++++++|||||||.||+|.++|+++...+......+ +
T Consensus 80 ~~~~~~-------~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~ 148 (436)
T TIGR01923 80 LLEEKD-------FQ--ADSLDRIEAAGRYE-TSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENL-G 148 (436)
T ss_pred cccccc-------ee--ecchHhhhhccccc-ccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhc-C
Confidence 632110 00 00111111111100 1112234567899999999999999999999999999888888887 7
Q ss_pred CCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcc
Q 015325 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (409)
Q Consensus 231 ~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr 310 (409)
.++.|++++..|++|.+++..++.++..|+++++.+.++ .++..++++++|++.++|+++..+.+..... +++|
T Consensus 149 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~----~~l~ 222 (436)
T TIGR01923 149 FTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEGGHN----ENLR 222 (436)
T ss_pred CCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC----CceE
Confidence 889999999999999999988899999999999997653 9999999999999999999999999875322 6899
Q ss_pred eeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcc
Q 015325 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (409)
Q Consensus 311 ~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~G 390 (409)
.++++|+++++++.+.+++. ++.+++.||+||+++..+...... .....++|.|+++++++|.+.+. ++.|
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~~~~~------~~~G 293 (436)
T TIGR01923 223 KILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEM-LHARPDVGRPLAGREIKIKVDNK------EGHG 293 (436)
T ss_pred EEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccc-cccccCCCccCCCcEEEEEeCCC------CCce
Confidence 99999999999999988764 899999999999987655432222 22223599999999999944132 2779
Q ss_pred eEEEecCccccccCCCC
Q 015325 391 ELSIRGPTIMKGIFLPH 407 (409)
Q Consensus 391 ei~v~g~~v~~gY~~~~ 407 (409)
||+++|+.++.|||+++
T Consensus 294 el~v~~~~~~~gy~~~~ 310 (436)
T TIGR01923 294 EIMVKGANLMKGYLYQG 310 (436)
T ss_pred EEEEECCccchhhCCCh
Confidence 99999999999999965
No 117
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-40 Score=314.38 Aligned_cols=373 Identities=21% Similarity=0.237 Sum_probs=300.1
Q ss_pred CCCCCCCCCCCCCHHHHHhhccCCCCCCCCCCcEEEeCCC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEc
Q 015325 27 PPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLS 102 (409)
Q Consensus 27 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~ 102 (409)
+...|.+ +.-.|+++.+.++..... .+++++++.... ...+||.|+.+++.++|..|.+ +|+++||+|++++
T Consensus 53 ~~~~w~~-g~~ln~~~n~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-~g~~kGD~V~~~m 128 (626)
T KOG1175|consen 53 PFTKWFP-GAFLNACYNCLDRHIKEK--GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-CGLKKGDTVAIYM 128 (626)
T ss_pred CCccccc-cchhhhhHhhhhhhhhhc--CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-cCCCCCcEEEEec
Confidence 4444444 455899988888875443 278888886522 2458999999999999999997 9999999999999
Q ss_pred CCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCC-------------------eE
Q 015325 103 TNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKH-------------------RT 163 (409)
Q Consensus 103 ~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-------------------~~ 163 (409)
|+.++++++++||.++|++.+++-...++.++...++.++++++++.+......+.... ..
T Consensus 129 Pm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~ 208 (626)
T KOG1175|consen 129 PMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLD 208 (626)
T ss_pred cCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhccccccccccee
Confidence 99999999999999999999999999999999999999999999998754332221100 00
Q ss_pred -EEe--C-CCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHH-hhccCCCCCCCCEEE
Q 015325 164 -ILI--D-SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVML 238 (409)
Q Consensus 164 -~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~d~~l 238 (409)
+.. . ...|+.++..... .......+.+|+.+|+|||||||.||++.+++......... ...++ ..++.|++.
T Consensus 209 ~~~~~~~~d~~~~~~~~~a~~--~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~-d~q~~dv~~ 285 (626)
T KOG1175|consen 209 LIVSRRNRDLFWSLELKKASP--EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF-DLQPSDVLW 285 (626)
T ss_pred eEEecccccccHHHHhhhcCC--CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec-cCCCcceEE
Confidence 000 0 1123333233222 22345567789999999999999999999998876554444 44455 799999999
Q ss_pred EeCchhhHHhH-HHHHHHHHhCCeEEEecC--CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC--CCCCCCCCcceee
Q 015325 239 FTMPYFHIYGL-FFCFRAAALMETAVVMQR--FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVA 313 (409)
Q Consensus 239 ~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~--~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~--~~~~~l~~Lr~v~ 313 (409)
+.....++.+. +.++.+|..|+++++.+. +++..+++.+.++++|.++..|+.++.|.+... ...+++++||.+.
T Consensus 286 ~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~ 365 (626)
T KOG1175|consen 286 CASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCG 365 (626)
T ss_pred EecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEe
Confidence 99999999999 567889999999999963 599999999999999999999999998877655 3445567899999
Q ss_pred ecCCCCCHHHHHHHHHhCCCC-ceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCC-Ccce
Q 015325 314 CGAAPLGKDTIMAFASKFPKV-VLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-KEGE 391 (409)
Q Consensus 314 ~~G~~~~~~~~~~~~~~~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g-~~Ge 391 (409)
+.||++.++..+.+.+.+ +. +|.+.||.||+|+.++.........++++.++|.+|+.+.|.| ++|++++.+ +.|+
T Consensus 366 S~Gepi~~~~~ew~~~~~-~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~ 443 (626)
T KOG1175|consen 366 SVGEPINPEAWEWWKRVT-GLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGE 443 (626)
T ss_pred ecCccCCcchHHHHHHhc-CccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCCceeE
Confidence 999999999999999999 66 6999999999998776533222257889999999999999999 799999987 8999
Q ss_pred EEEecC---ccccccCCCCC
Q 015325 392 LSIRGP---TIMKGIFLPHF 408 (409)
Q Consensus 392 i~v~g~---~v~~gY~~~~~ 408 (409)
|+++.+ +.+++||+|++
T Consensus 444 l~~~~~~P~~~~r~~~~n~e 463 (626)
T KOG1175|consen 444 LRLKPPWPPGMFRTLWGNHE 463 (626)
T ss_pred EEEeCCCCccccccccCCHH
Confidence 999983 77999999975
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.8e-40 Score=312.57 Aligned_cols=287 Identities=15% Similarity=0.142 Sum_probs=246.7
Q ss_pred EEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhh
Q 015325 61 LINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQL 140 (409)
Q Consensus 61 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~ 140 (409)
++++ ++++||.||.++++++|+.|. .|+++|++|+++++|+.+++++++|++++|++++|+++..+.+++..++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~--~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~ 77 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ--FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKR 77 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHh
Confidence 5566 789999999999999999985 589999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHH
Q 015325 141 SNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA 220 (409)
Q Consensus 141 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~ 220 (409)
++++.+++++.... .. . .....++++++++|||||||.||+|.+||+++...
T Consensus 78 ~~~~~~i~~~~~~~-----------~~-----~------------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~ 129 (414)
T PRK08308 78 AGCHGLLYGESDFT-----------KL-----E------------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDRE 129 (414)
T ss_pred CCCCEEEecCcccc-----------cc-----c------------CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHH
Confidence 99999998762110 00 0 01234678999999999999999999999999988
Q ss_pred HHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCC
Q 015325 221 VASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG 299 (409)
Q Consensus 221 ~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~ 299 (409)
+......+ ....+|+++...|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|.+.++|+.+..+.+..
T Consensus 130 ~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~ 208 (414)
T PRK08308 130 IEAYNEAL-NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLL 208 (414)
T ss_pred HHHHHHhh-CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcC
Confidence 88777777 57888999999999999998 77899999999999999899999999999999999999999999998764
Q ss_pred CCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCC
Q 015325 300 STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPE 379 (409)
Q Consensus 300 ~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~ 379 (409)
.. ..+++.++++|+++++++.++|++. +.++++.||+||+++.... .......++|+|+|++++++.+ +
T Consensus 209 ~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~----~~~~~~~~~G~p~~~~~~~~~~-~ 277 (414)
T PRK08308 209 PG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSIC----PDMKSHLDLGNPLPHVSVSAGS-D 277 (414)
T ss_pred Cc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeec----CCCCCCCccCccCCCeEEEEec-C
Confidence 32 1368899999999999999999987 5689999999999764432 1223457899999999999986 3
Q ss_pred CCCCCCCCCcceEEEecC
Q 015325 380 TGDSLPPGKEGELSIRGP 397 (409)
Q Consensus 380 ~g~~~~~g~~Gei~v~g~ 397 (409)
+|+.|||++++.
T Consensus 278 ------~~~~gel~v~~~ 289 (414)
T PRK08308 278 ------ENAPEEIVVKMG 289 (414)
T ss_pred ------CCCCceEEEEcC
Confidence 366799999864
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=3.3e-37 Score=322.17 Aligned_cols=333 Identities=15% Similarity=0.112 Sum_probs=249.9
Q ss_pred CCCHHHHHhhccCCCCCCCCCCcEEEeC---CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHH
Q 015325 37 PISAVDYVSSLRATLPWRDDDTVALINS---VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (409)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~a~~~~---~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~ 113 (409)
..|+.++|.+.++++ |+++|+... .+-+++||+|+.++++++|++|++ +|+++||+|+|+++|+++|+++.+
T Consensus 426 ~~Tl~dll~~~a~~~----pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-lGV~~GDrVaIls~N~~Ewvia~l 500 (1452)
T PTZ00297 426 VRSLGEMWERSVTRH----STFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-LGVRPGDVIGVDCEASRNIVILEV 500 (1452)
T ss_pred CCCHHHHHHHHHHHC----CCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHH
Confidence 368999999999998 999999632 112679999999999999999999 999999999999999999999999
Q ss_pred HHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhc---CCe-EEEeCCC-----------------cch
Q 015325 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KHR-TILIDSP-----------------EFD 172 (409)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~-~~~~~~~-----------------~~~ 172 (409)
||+++|++.+|+.+ +.+++.+++++++++++|++.+....+.+. .++ +++++.. .|+
T Consensus 501 A~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~ 578 (1452)
T PTZ00297 501 ACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYE 578 (1452)
T ss_pred HHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHH
Confidence 99999999999975 467999999999999999998776655432 222 3444310 134
Q ss_pred hhhcccCCcccccccccCCCCEEEEEc---CCCCCCCcchhhhccHHHHHHHHHhhcc--CCCCCCCCEEEEeCchhhHH
Q 015325 173 SMTMSWNSKHELDRAKVCQSDVAAIMY---SSGTTGRVKGVMLTHRNLTAAVASSFAS--SPKRVSPAVMLFTMPYFHIY 247 (409)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~a~i~~---TSGTTG~pK~v~~s~~~l~~~~~~~~~~--~~~~~~~d~~l~~~p~~~~~ 247 (409)
++...+............++|++.|+| ||||||.||||++||++++..+...... .+...++|++++.+|++|++
T Consensus 579 ~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~ 658 (1452)
T PTZ00297 579 FVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLF 658 (1452)
T ss_pred HHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHH
Confidence 444433211111122346788999985 9999999999999999999988876542 22346789999999999999
Q ss_pred hHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCC-------------------------
Q 015325 248 GLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD------------------------- 302 (409)
Q Consensus 248 g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~------------------------- 302 (409)
+....+.++..|+++.+ ++++.+++.|++++||+++++|.+++++......+
T Consensus 659 er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~ 735 (1452)
T PTZ00297 659 NRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINI 735 (1452)
T ss_pred HHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 98777888999999874 47899999999999999999999998665432100
Q ss_pred -CCCC----------------CCcceeeecCC--CCCHHHHHHHHHhCCCCceecccCcccccceecccCCCCCCCCCCc
Q 015325 303 -GYDL----------------SSLETVACGAA--PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (409)
Q Consensus 303 -~~~l----------------~~Lr~v~~~G~--~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~s 363 (409)
.... .++|.+++||+ +++ .+... ++++...||+||+. +. +...... .
T Consensus 736 g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~-----~~l~~--~i~i~~g~glTE~~---~~--~~~~~~~--~ 801 (1452)
T PTZ00297 736 HRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTS-----FSLLE--HISVCYVPCLREVF---FL--PSEGVFC--V 801 (1452)
T ss_pred CCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccC-----hHHhC--CceEEEecceEEee---ee--cCCCCcc--c
Confidence 0000 46888888873 444 33333 57788899999953 22 1122222 2
Q ss_pred cccccCCceEEEecC-CCCCCCCCCCcceEEEec
Q 015325 364 TGRLSAGLEAKIVDP-ETGDSLPPGKEGELSIRG 396 (409)
Q Consensus 364 ~G~p~~~~~v~i~d~-~~g~~~~~g~~Gei~v~g 396 (409)
.|.|+|++++||.|. +.+.. +..|||++++
T Consensus 802 ~G~PlpgvEvKI~~~~E~~~~---~~~GEIlvr~ 832 (1452)
T PTZ00297 802 DGTPAPSLQVDLEPFDEPSDG---AGIGQLVLAK 832 (1452)
T ss_pred CCeecCceEEEEcccccccCC---CCCCeEEEEE
Confidence 499999999999972 33332 3469999964
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-36 Score=302.70 Aligned_cols=354 Identities=21% Similarity=0.227 Sum_probs=292.7
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~ 117 (409)
.++.+.+...+... |+++|+++. +..+||+|+..+++++|+.|.+ .|++++++|+++++.+.++++.++|+++
T Consensus 227 ~~i~~~f~~~a~~~----p~~~a~~~~--~~~lty~el~~~a~~la~~l~~-~g~~~~~~V~i~~~rs~~~i~~~l~ilk 299 (642)
T COG1020 227 LTIHLLFEEQAATT----PDAVALVRG--GQQLTYAELDARANRLARLLIS-LGVGPGETVAILADRSLELVVALLAVLK 299 (642)
T ss_pred chHHHHHHHHHHhC----CCceeEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCCHHHHHHHHHHHh
Confidence 67999999999999 999999987 7899999999999999999999 9999999999999889999999999999
Q ss_pred hCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcccccccccCCCCEEEE
Q 015325 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (409)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (409)
+|+.++|+++..+.+++.++++..++..+++............. +..+..... .... ........+++.+|+
T Consensus 300 aG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~---~~~~~~~~~~~~ayi 371 (642)
T COG1020 300 AGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDDALSE---IPDT---DPIPQALLGDALAYI 371 (642)
T ss_pred cCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--ccccccccc---CCcc---CcccccCCCCCeEEE
Confidence 99999999999999999999999999999998433322111111 111111111 0000 111123455889999
Q ss_pred EcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC---CCHHHHH
Q 015325 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (409)
Q Consensus 198 ~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~ 274 (409)
+|||||||.||||.++|+++.+...+....+ .....|+++...++.+..+.+.++.++..|+++++.+. .++..+.
T Consensus 372 iytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~ 450 (642)
T COG1020 372 IYTSGSTGQPKGVRIEHRALANLLNDAGARF-GLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALL 450 (642)
T ss_pred EEccCCCCCCCCceecCHHHHHHHHHHHHhc-CCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHH
Confidence 9999999999999999999999777777777 78899999999999888888999999999999999964 6899999
Q ss_pred HHHHHhcceeEeechHHHHHHHhCCCC--CCCCCCCcceeeecCCCCCHHHHHHHHHhCC-CCceecccCcccccceecc
Q 015325 275 KAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFR 351 (409)
Q Consensus 275 ~~i~~~~~t~l~~~p~~l~~l~~~~~~--~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~ 351 (409)
..+.++++|++..+|+.+..++..... .......+|.+++||+.++..+..++....+ ...+.+.||+||+......
T Consensus 451 ~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~ 530 (642)
T COG1020 451 ELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPS 530 (642)
T ss_pred HHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheee
Confidence 999999999999999999999876222 1222335999999999999999999988764 5789999999996654443
Q ss_pred cCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 352 TVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 352 ~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
...........++|+|+++..+.|.| +.++++|.|..||+++.|.++..||++.+.
T Consensus 531 ~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~ 586 (642)
T COG1020 531 FPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPD 586 (642)
T ss_pred EEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChh
Confidence 22222222246899999999999999 999999999999999999999999999874
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=6.3e-27 Score=203.18 Aligned_cols=205 Identities=13% Similarity=0.055 Sum_probs=157.1
Q ss_pred HhhccCCCCCCCCCCcEEEeC-C---CCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhC
Q 015325 44 VSSLRATLPWRDDDTVALINS-V---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (409)
Q Consensus 44 l~~~~~~~~~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G 119 (409)
|...++++ |+++|++.. + ++.++||+|+.++++++|+.|++..|+++||+|+|+++|+++++++++|++++|
T Consensus 2 ~~~~~~~~----p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G 77 (227)
T TIGR03089 2 LSPLLAAD----PASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTG 77 (227)
T ss_pred hhhhhhhC----CCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 34556666 999999742 2 234799999999999999999961499999999999999999999999999999
Q ss_pred CeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeC-----C----------CcchhhhcccCCcccc
Q 015325 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILID-----S----------PEFDSMTMSWNSKHEL 184 (409)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~ 184 (409)
++++|++ .+++++++++++......... .++.+. . .++......... ..
T Consensus 78 ~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 141 (227)
T TIGR03089 78 VEVVLAG-------------DPDADVVVTGPDRLAAAAGSG-EVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD--QF 141 (227)
T ss_pred CEEEeCC-------------CCCCCEEEeCcchhhhcccCC-ceEEEeccccccCCCCCCCCcccchhhhhhccCC--CC
Confidence 9999995 578999999887766643221 222221 0 012221211111 11
Q ss_pred ccc-ccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeE
Q 015325 185 DRA-KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (409)
Q Consensus 185 ~~~-~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~ 262 (409)
... ...++|++.++||||+ +|++++... ... +++++|+++ .+|++|.+|+ ..++.++..|+++
T Consensus 142 ~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~ 206 (227)
T TIGR03089 142 APYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSL 206 (227)
T ss_pred CCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceE
Confidence 111 3456899999999985 666665544 334 578999999 9999999999 7899999999999
Q ss_pred EEecCCCHHHHHHHHHHhcce
Q 015325 263 VVMQRFDLKMMLKAVEEFRVT 283 (409)
Q Consensus 263 v~~~~~~~~~~~~~i~~~~~t 283 (409)
++.++|++..+++.|+++|||
T Consensus 207 v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 207 VLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999997
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=3.9e-26 Score=214.21 Aligned_cols=191 Identities=28% Similarity=0.413 Sum_probs=161.3
Q ss_pred ccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEe--
Q 015325 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-- 265 (409)
Q Consensus 188 ~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-- 265 (409)
...++++++++|||||||.||+|+++|+++..........+ ...++++...|++|.+++..++.++..|+++++.
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCc
Confidence 34468999999999999999999999999988877665544 3557899999999999998788899999998873
Q ss_pred -cCCCHHHHHHHHHHhc--ceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCc
Q 015325 266 -QRFDLKMMLKAVEEFR--VTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (409)
Q Consensus 266 -~~~~~~~~~~~i~~~~--~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (409)
..+++..+++.+++++ .++...+|..+..++..... ...++++|.+++||+++++++.+++.+. ++++++.||+
T Consensus 108 ~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~ 184 (358)
T PRK07824 108 SAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGM 184 (358)
T ss_pred CCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccC
Confidence 4578999999999998 56677889988887765432 3457899999999999999999998864 8999999999
Q ss_pred ccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCccccccCCCCC
Q 015325 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFLPHF 408 (409)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~~~ 408 (409)
||++..+. ..|.|++++++++.| |||+++|+.++.||+|++.
T Consensus 185 TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~ 226 (358)
T PRK07824 185 SETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVD 226 (358)
T ss_pred CccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcc
Confidence 99865321 258999999999955 9999999999999998764
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.92 E-value=5.9e-24 Score=203.56 Aligned_cols=201 Identities=22% Similarity=0.252 Sum_probs=154.0
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHh---hccCCCCCCCCEEEEeCchhhHHh-HHHHHHHHHhCCeEEEe
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS---FASSPKRVSPAVMLFTMPYFHIYG-LFFCFRAAALMETAVVM 265 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~g-~~~~~~~l~~G~~~v~~ 265 (409)
..++++++++||||||.||++.+||+++....... ...+ +..++|++++..+..+..+ +...+.+...|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA-GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc-CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 45678889999999999999999999986553322 2334 5778898887665543323 23456688899999888
Q ss_pred cCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCC--CCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcc
Q 015325 266 QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLT 343 (409)
Q Consensus 266 ~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 343 (409)
...+++.+++.|+++++|++.++|+.+..|++....... ...+||.++++||++++++.+.+++.| ++++++.||+|
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 777889999999999999999999999988765332222 235899999999999999999999999 89999999999
Q ss_pred cccceecccCCCCCCCCCCcccccc--CCceEEEecCCCCCCCCCCCcceEEEecC
Q 015325 344 ESTAGVFRTVGPDECRRWGSTGRLS--AGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (409)
Q Consensus 344 E~~~~~~~~~~~~~~~~~~s~G~p~--~~~~v~i~d~~~g~~~~~g~~Gei~v~g~ 397 (409)
|+++..+...... . ..|.++ +++.++|+|+++|+++++|+.|||++++.
T Consensus 231 E~~~~~~~~~~~~--~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~ 281 (422)
T TIGR02155 231 EVIGPGVAMECVE--T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL 281 (422)
T ss_pred hhcCCceeecccc--c---CCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC
Confidence 9853211111100 1 123333 46778999988999999999999999984
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.91 E-value=1.3e-22 Score=197.65 Aligned_cols=364 Identities=17% Similarity=0.220 Sum_probs=261.2
Q ss_pred CCHHHHHhhccCCCCCCCCCCcEEEeC----CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHH
Q 015325 38 ISAVDYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~ 113 (409)
.++.++|..+++.+ ||++|+..- ....++||++|..++.+++..|+.+.-+++||.|+++.++++|++++++
T Consensus 770 ~~ile~Lq~R~a~t----p~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~ 845 (1363)
T KOG3628|consen 770 LTILEILQWRAAKT----PDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIY 845 (1363)
T ss_pred HHHHHHHHHHhhcC----CCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHH
Confidence 68999999999999 999999863 2247899999999999999999997789999999999999999999999
Q ss_pred HHHHhCCeEccCCCCC------CHHHHHHHHhhcCCeEEEEcCchHHHHhhcCC------eEE--EeCCCcchhhhcccC
Q 015325 114 SLLSLGVIISPANPVN------TESEISRQIQLSNPVIAFATSSVVHKLAKLKH------RTI--LIDSPEFDSMTMSWN 179 (409)
Q Consensus 114 A~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~ 179 (409)
||+.+|.+++|++|.- .-..+..+++..++..|+++......+..... ..+ .++.+.+.+-.....
T Consensus 846 ~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~ 925 (1363)
T KOG3628|consen 846 ACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRK 925 (1363)
T ss_pred HHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhh
Confidence 9999999999999942 45568889999999999999877665542210 000 011111111101100
Q ss_pred -----CcccccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH-HHHH
Q 015325 180 -----SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCF 253 (409)
Q Consensus 180 -----~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~ 253 (409)
..........++..+|++-+.--++|.--++.+||.++++.+..+.+.. .+.+..-++...+.+-..|+ .+++
T Consensus 926 ~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~-~l~~~rpl~~~~~~~sGlgf~~wcL 1004 (1363)
T KOG3628|consen 926 KNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC-QLYKSRPLLGCSSPYSGLGFNHWCL 1004 (1363)
T ss_pred hhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH-ccccCCceEEEecCccchhHHHHHH
Confidence 0001122234567899999988899999999999999999999999888 45555545555555555566 8999
Q ss_pred HHHHhCCeEEEecC----CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCc------ceeeecCCCCCHHH
Q 015325 254 RAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSL------ETVACGAAPLGKDT 323 (409)
Q Consensus 254 ~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~L------r~v~~~G~~~~~~~ 323 (409)
..++.|.+.+++++ -+|..++..|++|++..++.+-..+..+.+....+..+++.. ..++..-+.....+
T Consensus 1005 lgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~al 1084 (1363)
T KOG3628|consen 1005 LGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIAL 1084 (1363)
T ss_pred HHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHH
Confidence 99999999888864 478999999999999999999999999988765544443322 22333345555677
Q ss_pred HHHHHHhCCCC-----ceecccCcccccceecccC---------CCC----------------CCCCCCccccccCCceE
Q 015325 324 IMAFASKFPKV-----VLVQAYGLTESTAGVFRTV---------GPD----------------ECRRWGSTGRLSAGLEA 373 (409)
Q Consensus 324 ~~~~~~~~~~~-----~i~~~yG~tE~~~~~~~~~---------~~~----------------~~~~~~s~G~p~~~~~v 373 (409)
++.|.+.|... .+-..|+.-=-...+.... .+. ........|+..+++++
T Consensus 1085 i~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i 1164 (1363)
T KOG3628|consen 1085 IASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDI 1164 (1363)
T ss_pred HHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCccccccee
Confidence 77777766211 1222222221111111100 000 00011224888899999
Q ss_pred EEecCCCCCCCCCCCcceEEEecCccccccCCC
Q 015325 374 KIVDPETGDSLPPGKEGELSIRGPTIMKGIFLP 406 (409)
Q Consensus 374 ~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~~ 406 (409)
.|++||+..+|.+|+.||||+.|.+-+.+|++.
T Consensus 1165 ~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~ 1197 (1363)
T KOG3628|consen 1165 AIVNPETKGPCRDGELGEIWVNSAHNASCSFTI 1197 (1363)
T ss_pred EEeCCccccccccCCcceEEecccccccccccc
Confidence 999999999999999999999999999998864
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.89 E-value=1.8e-22 Score=193.59 Aligned_cols=197 Identities=16% Similarity=0.175 Sum_probs=150.5
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhc---cCCCCCCCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEe
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA---SSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVM 265 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~ 265 (409)
..++++.+.+||||||.||+|.+||+++......... .. ++.++|+++...+..+..+. ...+++...|++++..
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~-G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQ-GFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 4567889999999999999999999998765544332 23 67888999999888776555 4446677888887644
Q ss_pred cCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCC--CCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcc
Q 015325 266 QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLT 343 (409)
Q Consensus 266 ~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~--~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 343 (409)
.. ....++.|+++++|.+.++|+.+..|......... ...+||.+++|||++++++.+.+++.| ++++++.||+|
T Consensus 163 ~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~T 239 (445)
T TIGR03335 163 GK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGST 239 (445)
T ss_pred Cc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChh
Confidence 33 35678999999999999999988877654322221 236899999999999999999999999 89999999999
Q ss_pred cccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecC
Q 015325 344 ESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (409)
Q Consensus 344 E~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~ 397 (409)
|++....+ ........+-+++.++|+|++++.++++|+.|||++++-
T Consensus 240 E~~~~~~c-------~~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L 286 (445)
T TIGR03335 240 EGTMCGEC-------QAVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTL 286 (445)
T ss_pred hhhheEEe-------cCCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEec
Confidence 98532111 111112233356789999988889999999999999975
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.88 E-value=4.5e-22 Score=186.44 Aligned_cols=168 Identities=18% Similarity=0.163 Sum_probs=136.4
Q ss_pred CCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCC--CCCEEEEeCchhhHHhH-HHHHHHHHhCCeEEEecCC
Q 015325 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV--SPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF 268 (409)
Q Consensus 192 ~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~ 268 (409)
+..++++|||||||.||+|.+||+++...+......+ +.. ..+++++.+|++|.+++ +.++.++..|+++++.+.+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 5578999999999999999999999988877766655 343 34689999999999998 6788899999999999888
Q ss_pred CHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccce
Q 015325 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (409)
Q Consensus 269 ~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (409)
++..+++.++.+ |++.++|+++..+.+.. ..++++|. ++||+++++++++++++. +...+++.||+||+++.
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 888888888654 89999999999998753 34677886 678999999999999886 23479999999999875
Q ss_pred ecccCCCCCCCCCCccccccCCceEEE
Q 015325 349 VFRTVGPDECRRWGSTGRLSAGLEAKI 375 (409)
Q Consensus 349 ~~~~~~~~~~~~~~s~G~p~~~~~v~i 375 (409)
.+.. .+...|.|+|++++++
T Consensus 246 ~~~~-------~~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 246 GLRE-------APDDPFRLLPDLACFA 265 (386)
T ss_pred cccc-------CCCCCcccCCCccccC
Confidence 4431 1234678889887765
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.81 E-value=6.2e-19 Score=161.58 Aligned_cols=202 Identities=25% Similarity=0.293 Sum_probs=157.4
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhh-HHhHHHHHHHHHhCCeEEEe
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFH-IYGLFFCFRAAALMETAVVM 265 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~-~~g~~~~~~~l~~G~~~v~~ 265 (409)
...++...|--||||||+|+-+.+++..+......+.+.+ .+...+|++....-..- ..|+..-+++-..|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 4456677789999999999999999998876666655554 36777887766554211 22234455666688887777
Q ss_pred cCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCC--CCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcc
Q 015325 266 QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLT 343 (409)
Q Consensus 266 ~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~--~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 343 (409)
.+-+.+.-+.+++++++|++.++|+.+..|.+...... ..-.+||.+++|+|++++++.+.+.++| |++.++.||+|
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGlt 245 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGLT 245 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccccc
Confidence 66688999999999999999999999999988765442 3346899999999999999999999999 99999999999
Q ss_pred cccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEec
Q 015325 344 ESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (409)
Q Consensus 344 E~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g 396 (409)
|..+.... .|....-....-+++-++|+||++|+.+++|+.|||++..
T Consensus 246 E~~g~g~~-----eC~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~ 293 (438)
T COG1541 246 EGFGPGAG-----ECTERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITT 293 (438)
T ss_pred cccCCccc-----ccccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEe
Confidence 98766311 1211112334457788999999999999999999999985
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.65 E-value=3.3e-15 Score=150.41 Aligned_cols=302 Identities=16% Similarity=0.102 Sum_probs=198.4
Q ss_pred CHHHHHhhccCCCCCCCCCCcEEEeC----CC--CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHH
Q 015325 39 SAVDYVSSLRATLPWRDDDTVALINS----VT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (409)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~a~~~~----~~--~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~ 112 (409)
++...+.+.+.+. |+..+..+- .. -..+||.+....++.+++.|.+ .|...|+.|++++..+.++++..
T Consensus 37 ~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-~~~~~~~~v~i~~~~~~d~~v~v 111 (1032)
T KOG1178|consen 37 TLEDSFRRELAEA----PENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-LGSLRGTTVAIYMLPSVDLVVSV 111 (1032)
T ss_pred chhhHHHHHHhhc----ccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-cccccCceEEEeccCcCCeeeee
Confidence 3444555666666 666655431 11 2679999999999999999999 99999999999999999999999
Q ss_pred HHHHHhCCeEccCCCCCC----HHHHHHHHhhc-CCeEEEEcCch-HHHHhhc---CCeEEEeCCCcchhhhcccCCccc
Q 015325 113 FSLLSLGVIISPANPVNT----ESEISRQIQLS-NPVIAFATSSV-VHKLAKL---KHRTILIDSPEFDSMTMSWNSKHE 183 (409)
Q Consensus 113 ~A~~~~G~~~v~l~~~~~----~~~l~~~l~~~-~~~~ii~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 183 (409)
++.+++|..+++++|+++ .+++.++.... ....-+..... ....... ...+..+ ...+..+..... .
T Consensus 112 ~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~~~~~~---~ 187 (1032)
T KOG1178|consen 112 FAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMVLHNED---T 187 (1032)
T ss_pred eehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhc-cchhhhhhccCC---C
Confidence 999999999999999999 33332222111 11111111110 0100000 0001111 111111111111 1
Q ss_pred ccccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCc-h-hhHHhHHHHHHHHHhCCe
Q 015325 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP-Y-FHIYGLFFCFRAAALMET 261 (409)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p-~-~~~~g~~~~~~~l~~G~~ 261 (409)
....-..+++.+++.||||+||.||+|.-+|..+...-.+....+ ..+.++.+ ...+ . ++..-...+.+.+..|+.
T Consensus 188 r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-~~t~s~~~-~~~~~~~~~d~i~~~~~~~L~~~~~ 265 (1032)
T KOG1178|consen 188 REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-PPTGSDRF-TFKTSVYFDDTIQKFIGALLFNGNN 265 (1032)
T ss_pred cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-CcCccchh-hhhheeecccchHHHHhhHhhcCce
Confidence 222334567789999999999999999999999999999888887 56666664 2222 2 222222345555556665
Q ss_pred EEEecC---CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCC-------------CCCCCCcceeeecCCCCCHHHHH
Q 015325 262 AVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD-------------GYDLSSLETVACGAAPLGKDTIM 325 (409)
Q Consensus 262 ~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~-------------~~~l~~Lr~v~~~G~~~~~~~~~ 325 (409)
+..+.. -++..+.+.+++++++....+|++.+.++...... ....+.||....+|++..-++..
T Consensus 266 l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~ 345 (1032)
T KOG1178|consen 266 LLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYT 345 (1032)
T ss_pred eecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhh
Confidence 655533 24799999999999999999999988777654321 11234799999999999999999
Q ss_pred HHHHhCCCCceecccCcccccceecc
Q 015325 326 AFASKFPKVVLVQAYGLTESTAGVFR 351 (409)
Q Consensus 326 ~~~~~~~~~~i~~~yG~tE~~~~~~~ 351 (409)
.+...+.-.-...-|+.++..+..+.
T Consensus 346 s~~~~~~~~~~~~~y~s~~~~~~~s~ 371 (1032)
T KOG1178|consen 346 STFDLLAEIFFGLPYLSTDPTGLVSY 371 (1032)
T ss_pred hhhhcccceeeeecccCCCCccceeH
Confidence 77766532223333888888776655
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.57 E-value=9e-14 Score=136.81 Aligned_cols=355 Identities=14% Similarity=0.161 Sum_probs=241.1
Q ss_pred CHHHHHhhccCCCCCCCCCCcEEEeCCC-C--ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCC--CchHHHHH
Q 015325 39 SAVDYVSSLRATLPWRDDDTVALINSVT-G--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYF 113 (409)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~--~~~~~~~~ 113 (409)
++...++.+-..+ +-..|.+.-+. + ..+||..+..++.++|+.-+.+-|++++|+|.++...+ .++++..+
T Consensus 95 d~~avl~~~~nhs----~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~ 170 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHS----ATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLF 170 (1363)
T ss_pred chHHHHHhhccCC----CCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhc
Confidence 3444454444444 56667665322 2 57999999999999999444448999999999987766 79999999
Q ss_pred HHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCCCcchhhhcccCCcc--------ccc
Q 015325 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKH--------ELD 185 (409)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 185 (409)
+|...|.+.+|+.+..+.+++..+++....+++++............ -..++...+..|..+. ...
T Consensus 171 gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~------~~~s~~k~v~~w~t~~~k~~~~~~k~~ 244 (1363)
T KOG3628|consen 171 GCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDN------SPVSLAKAVAWWKTNDFKGNYTKDKIK 244 (1363)
T ss_pred cccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc------CcccHHHHHHhhhcccccceeehhhcc
Confidence 99999999999999999999999999999999998765444333211 1112222222222110 111
Q ss_pred ccccCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC-------------------CCCCCCCEEEEeCchhhH
Q 015325 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-------------------PKRVSPAVMLFTMPYFHI 246 (409)
Q Consensus 186 ~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~-------------------~~~~~~d~~l~~~p~~~~ 246 (409)
.+...-. .++|-||++++|.--|++.+|+ ++.+.+...... ......+.++........
T Consensus 245 ~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~ 322 (1363)
T KOG3628|consen 245 KPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQ 322 (1363)
T ss_pred CCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccc
Confidence 1112223 7899999999999999999888 433332222111 134566777777777777
Q ss_pred HhH-HHHHHHHHhCCeEEEecC---CCHHHHHHHHHHhcceeEeechHHHHHHHhCCC-----------CCCCCCCCcce
Q 015325 247 YGL-FFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS-----------TDGYDLSSLET 311 (409)
Q Consensus 247 ~g~-~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~-----------~~~~~l~~Lr~ 311 (409)
.|+ .+++.++.+|.+.+.+++ ..|..+..++-+++++++..--..++....... .+..++++||.
T Consensus 323 lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~ 402 (1363)
T KOG3628|consen 323 LGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKG 402 (1363)
T ss_pred cchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceee
Confidence 777 789999999999999986 678899999999999998877666654443322 11245889999
Q ss_pred eeecCCCCCHHHHHHHHHhC--C-------------------CCceecccCcccccceecccCCCCC-------------
Q 015325 312 VACGAAPLGKDTIMAFASKF--P-------------------KVVLVQAYGLTESTAGVFRTVGPDE------------- 357 (409)
Q Consensus 312 v~~~G~~~~~~~~~~~~~~~--~-------------------~~~i~~~yG~tE~~~~~~~~~~~~~------------- 357 (409)
+++.-..++.+..+....+| | |.-....-+++|.+......+....
T Consensus 403 C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~ 482 (1363)
T KOG3628|consen 403 CMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEA 482 (1363)
T ss_pred eEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccc
Confidence 99999999998876655554 1 1111122233444433322211000
Q ss_pred ---------------CCCCCccccccCC-ceEEEecCCCCCCCCCCCcceEEEecCccccccCC
Q 015325 358 ---------------CRRWGSTGRLSAG-LEAKIVDPETGDSLPPGKEGELSIRGPTIMKGIFL 405 (409)
Q Consensus 358 ---------------~~~~~s~G~p~~~-~~v~i~d~~~g~~~~~g~~Gei~v~g~~v~~gY~~ 405 (409)
......+|...|| +.+.+++|++.+.|..+++|||||.++++..+||.
T Consensus 483 L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~a 546 (1363)
T KOG3628|consen 483 LKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYA 546 (1363)
T ss_pred cccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceee
Confidence 0011224555555 46788898999999999999999999999999994
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.17 E-value=4e-10 Score=106.38 Aligned_cols=145 Identities=14% Similarity=0.072 Sum_probs=99.2
Q ss_pred EEEEEcCCCCCCCcchhhhccHHHHHHHHHh-hccCC-CCCCCCEEEEe--CchhhHHhHHHHHHHHHhCCe-EEEec-C
Q 015325 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASS-FASSP-KRVSPAVMLFT--MPYFHIYGLFFCFRAAALMET-AVVMQ-R 267 (409)
Q Consensus 194 ~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~-~~~~~-~~~~~d~~l~~--~p~~~~~g~~~~~~~l~~G~~-~v~~~-~ 267 (409)
-..+..||||||.|-.+..+.+......... ..... +...++++... .+. + ++.++..... +...+ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~------ly~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-N------LYQSVNNRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-h------HHHHHHhccceeeecCCC
Confidence 3456779999999999999888654333222 22221 33343433332 222 1 1122222111 22222 1
Q ss_pred CCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCceecccCcccccc
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTA 347 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 347 (409)
.+.+..++.|++++++++.+.|+.+..|++.......+ ..+|.++++||.+++...+.+++.| |+++++.||+|| +.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 46789999999999999999999999998864433333 4689999999999999999999999 899999999999 44
Q ss_pred e
Q 015325 348 G 348 (409)
Q Consensus 348 ~ 348 (409)
.
T Consensus 251 l 251 (430)
T TIGR02304 251 L 251 (430)
T ss_pred e
Confidence 3
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.89 E-value=5.9e-08 Score=89.72 Aligned_cols=197 Identities=16% Similarity=0.179 Sum_probs=118.0
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHH---HHhhccCCCCCCCC-EEEEeCchhh---HHhH--HHHHHHHHhCC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV---ASSFASSPKRVSPA-VMLFTMPYFH---IYGL--FFCFRAAALME 260 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~---~~~~~~~~~~~~~d-~~l~~~p~~~---~~g~--~~~~~~l~~G~ 260 (409)
.++++..++.||||||.|--+.+.+..+.... ....+.+.+..... .++...|... .++. ...+.....+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 34667788999999999866666555554433 22333232222222 2333333211 1111 22333334444
Q ss_pred eEEEec--CCCHHHHHHHHH----HhcceeEeechHHHHHHHhCCCCCC--CCCC-CcceeeecC------CCCC-HHHH
Q 015325 261 TAVVMQ--RFDLKMMLKAVE----EFRVTHAAVTPPIVVAMSKGGSTDG--YDLS-SLETVACGA------APLG-KDTI 324 (409)
Q Consensus 261 ~~v~~~--~~~~~~~~~~i~----~~~~t~l~~~p~~l~~l~~~~~~~~--~~l~-~Lr~v~~~G------~~~~-~~~~ 324 (409)
. .+.. .+|.+.++..+. +.++..+++.|.++-.++....... ..|+ ..+.+..|| +.++ .++.
T Consensus 167 ~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 167 R-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred e-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 4 4443 367777666664 5678889998887666654433222 2333 456666666 5676 5778
Q ss_pred HHHHHhCCCC----ceecccCcccccceecccCCCCCCCCCCccccccCCceEEEecCCCCCCCCCCCcceEEEecCc
Q 015325 325 MAFASKFPKV----VLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPT 398 (409)
Q Consensus 325 ~~~~~~~~~~----~i~~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~ 398 (409)
+.+++.| |+ .+++.|||||.....+. . . .-.+++|-. +.|.||+|.++++.|+.|-|.+-.+.
T Consensus 246 ~~l~~~~-Gv~~~~~i~~~ygmtEl~s~~~~--~--~-----~~~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~ 312 (365)
T PF04443_consen 246 ARLQEVF-GVIPIENIYDMYGMTELNSQAYE--C--G-----HGHFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLA 312 (365)
T ss_pred HHHHHHH-CCCCHHHeeeeeeccccchhhee--C--C-----CCcccCCCe-EEEECCCCCcCCCCCCeeEEEEEccc
Confidence 8888888 65 79999999997654332 1 1 111123333 77889999999999999999888753
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.24 E-value=0.057 Score=50.86 Aligned_cols=87 Identities=17% Similarity=0.101 Sum_probs=72.3
Q ss_pred eeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCC--CchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 015325 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (409)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~--~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (409)
-+|+.|....+..+|+.|.. .|+.+||+|.+...-+ ..-+-..+|+.++|+..+|+.+. ..+.-..++++.++.+|
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 49999999999999999999 9999999998876511 12267888999999999999985 56667788999999999
Q ss_pred EEcCchHHHHh
Q 015325 147 FATSSVVHKLA 157 (409)
Q Consensus 147 i~~~~~~~~~~ 157 (409)
.+.......+.
T Consensus 187 ~~tps~~l~la 197 (438)
T COG1541 187 AATPSYLLYLA 197 (438)
T ss_pred EEChHHHHHHH
Confidence 99887654443
No 133
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=95.44 E-value=1.4 Score=43.94 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=31.1
Q ss_pred CCCcceeeecCCCCCHHHHHHHHHhCCCCceec-ccCccccc
Q 015325 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTEST 346 (409)
Q Consensus 306 l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~-~yG~tE~~ 346 (409)
.+++|+|.+.-..-...-+..++..+++.+++. .|++||+-
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~ 333 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECY 333 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceE
Confidence 467888777655556777788887778887776 69999963
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=94.92 E-value=0.17 Score=50.05 Aligned_cols=88 Identities=19% Similarity=0.177 Sum_probs=44.3
Q ss_pred CCCcceeeecCCCCCHHHHHHHHHhCCCCcee-cccCcccccceecccCCCCCCCCCCccccccCCc-eEEEecCCC---
Q 015325 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLV-QAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIVDPET--- 380 (409)
Q Consensus 306 l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~~~~~~~~~~~~~~~~~~s~G~p~~~~-~v~i~d~~~--- 380 (409)
.++|++|.+.+..-...-..++++.++++.++ ..|++||+-..+-. . .. ...+.+.++. -++-++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~----~-~~--~~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPL----D-PE--DPGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES------CC--C--EEE-TTSSEEEEEE-STT--
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEec----C-CC--CCceEeecCCeEEEEEeccCCcc
Confidence 47889777666555667788888888776544 57999996322211 1 11 1122233332 233333221
Q ss_pred -----C-----CCCCCCCcceEEEecCccc
Q 015325 381 -----G-----DSLPPGKEGELSIRGPTIM 400 (409)
Q Consensus 381 -----g-----~~~~~g~~Gei~v~g~~v~ 400 (409)
+ ..|..|+.-||+|+..+-.
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~~GL 368 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTNSGL 368 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEESTTS-
T ss_pred cccCCCceecHHHhcCCCeEEEEEecccce
Confidence 2 3457899999999986533
No 135
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=94.39 E-value=0.75 Score=45.64 Aligned_cols=41 Identities=15% Similarity=-0.002 Sum_probs=30.5
Q ss_pred CCCcceeeecCCCCCHHHHHHHHHhCCCCceec-ccCccccc
Q 015325 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTEST 346 (409)
Q Consensus 306 l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i~~-~yG~tE~~ 346 (409)
.+++|+|.+....-...-+..++..+++.+++. .|++||+-
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~ 344 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECY 344 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceE
Confidence 467888777665556777777877778887666 59999963
No 136
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=88.71 E-value=3.3 Score=39.70 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=65.4
Q ss_pred eeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCC--chHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 015325 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (409)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~--~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (409)
.+|..++......++..+.. .|+++||++......+. ......++....|+..++++... .+.+...+++.++.++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 46888887777777888887 89999999887655443 22334677889999999888764 5778889999999999
Q ss_pred EEcCchHHHH
Q 015325 147 FATSSVVHKL 156 (409)
Q Consensus 147 i~~~~~~~~~ 156 (409)
+........+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9887665443
No 137
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.78 E-value=5 Score=38.85 Aligned_cols=81 Identities=12% Similarity=0.183 Sum_probs=61.2
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc--hHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~--~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (409)
..+|..++...+..++..+.. .|+.+||++.+..+-+.. .....+++...|+..++... ......++++.++..
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~-~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~ 179 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVS-QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTG 179 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCE
Confidence 358999999888888888887 899999999998765543 23445788899998776553 234567788899998
Q ss_pred EEEcCch
Q 015325 146 AFATSSV 152 (409)
Q Consensus 146 ii~~~~~ 152 (409)
++.....
T Consensus 180 l~~~ps~ 186 (445)
T TIGR03335 180 IVASVFK 186 (445)
T ss_pred EEECHHH
Confidence 8775543
No 138
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=75.89 E-value=18 Score=31.33 Aligned_cols=54 Identities=7% Similarity=0.033 Sum_probs=43.2
Q ss_pred HhccCCCCCCEEEEEcCCCCc--hHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCC
Q 015325 87 QNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNP 143 (409)
Q Consensus 87 ~~~~gv~~g~~V~i~~~~~~~--~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 143 (409)
.. .|+.++|++. .+|-..- +...+++.+..|+..+.+ +..+.+++.+.+++.++
T Consensus 171 ~~-~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RA-AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hh-cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 55 7899999999 8876553 334688999999998887 58899999888888765
No 139
>PLN02736 long-chain acyl-CoA synthetase
Probab=74.31 E-value=42 Score=34.32 Aligned_cols=100 Identities=10% Similarity=-0.037 Sum_probs=72.4
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+ .+..++|++...++-..-+. ...++++..|+.++.+. ...++.+...+++.+++.++.
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~ 156 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFC 156 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEE
Confidence 368888776666554443 16888999988888754432 46788999999988774 578999999999999999999
Q ss_pred chHHHHHHHhCCCCCCCCCCCcceeeec
Q 015325 288 TPPIVVAMSKGGSTDGYDLSSLETVACG 315 (409)
Q Consensus 288 ~p~~l~~l~~~~~~~~~~l~~Lr~v~~~ 315 (409)
.+..+..+..... .++.++.+++.
T Consensus 157 ~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 157 VPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred CHHHHHHHHHHhh----cCCCceEEEEE
Confidence 9887776654321 23456665554
No 140
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=73.26 E-value=26 Score=33.18 Aligned_cols=90 Identities=11% Similarity=-0.030 Sum_probs=64.7
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
..++.+|++. -..-.+|..++...+..+...+ -+.++++++....+-... .+...++++..|+..+.++
T Consensus 7 ~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~-~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 7 RYPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIE-FVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp HSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHH-HHHHHHHHHHTT-EEEEEE
T ss_pred hCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccce-eeeeecccccccccccccc
Confidence 3567787766 1223467777766555544433 167888888887777533 3467899999999999986
Q ss_pred -CCCHHHHHHHHHHhcceeEee
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~ 287 (409)
....+.+...+++.++++++.
T Consensus 78 ~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccceeEEEE
Confidence 468899999999999999996
No 141
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=72.35 E-value=44 Score=32.73 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=68.9
Q ss_pred CCCcEEEeCC---CC----ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCch-HHHHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~~---~~----~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~-~~~~~A~~~~G~~~v~l~~ 127 (409)
++.++++..- +| ..+|+..+...+..... . .++++++++...++-...+ +...++++..|+..+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---W-LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---h-hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 4556666421 12 35889888876665555 4 6889999988887754322 3334558889988877766
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
. +.+.+...+++.++..+++.......+.
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 270 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLL 270 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHH
Confidence 5 8899999999999999998876665553
No 142
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=70.89 E-value=27 Score=33.61 Aligned_cols=107 Identities=12% Similarity=0.005 Sum_probs=76.4
Q ss_pred hhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeE
Q 015325 209 GVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHA 285 (409)
Q Consensus 209 ~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 285 (409)
++..|.+.+...+..++.-+ -++.++|++..+.|-+.-.- .+.+++..+|..++... .+....+.-.+++.++..+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~-l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWV-LCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHH-HHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 45678888877766654433 17999999999999875433 46677888888877774 4667888889999999999
Q ss_pred eechHHH-----HHHHhCC---------CCCCCCCCCcceeeecC
Q 015325 286 AVTPPIV-----VAMSKGG---------STDGYDLSSLETVACGA 316 (409)
Q Consensus 286 ~~~p~~l-----~~l~~~~---------~~~~~~l~~Lr~v~~~G 316 (409)
+..|.+. +.+.... ..+...|+.|+.++..+
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 9888532 2233211 13455688899998887
No 143
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=68.31 E-value=26 Score=32.86 Aligned_cols=65 Identities=15% Similarity=0.036 Sum_probs=49.3
Q ss_pred HHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 015325 79 TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (409)
Q Consensus 79 ~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (409)
+..+.-.|+. +++++||-|++ .+.-|++..=+++..|+.+|.+|-+ .+.+.+...+... .++|+.
T Consensus 59 T~AL~laL~a-l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLA-LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHh-cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 3444555676 79999995544 4778999999999999988887764 6888898888774 566664
No 144
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=68.30 E-value=37 Score=35.39 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC-----CCCCC-----------CEEEEeCchhhHHhHHHHH
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-----KRVSP-----------AVMLFTMPYFHIYGLFFCF 253 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-----~~~~~-----------d~~l~~~p~~~~~g~~~~~ 253 (409)
.++.+|++....| .+ ...+|.+.+...+..+...+. +..++ |++...++-..- .+...+
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e-w~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN-WLVADL 148 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH-HHHHHH
Confidence 4566776533222 11 124688877666655544442 46665 777777775432 235778
Q ss_pred HHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecC
Q 015325 254 RAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (409)
Q Consensus 254 ~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G 316 (409)
+++..|+..+.+ +.+.++.+...+++-++.+++..+..+..+.... ..++.|+.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 999999998887 4688999999999999999999888887776542 1245676665543
No 145
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.22 E-value=46 Score=32.56 Aligned_cols=97 Identities=20% Similarity=0.153 Sum_probs=68.3
Q ss_pred CCCcEEEeC---CCC----ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCC--chHHHHHHHHHhCCeEccCC
Q 015325 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (409)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~--~~~~~~~A~~~~G~~~v~l~ 126 (409)
++.++++.- .+| ..+|+..+...+..+. .. .++++++++...++-.. .+...+++++..|+..++.
T Consensus 165 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 165 PDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWA---EY-LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---Hh-hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 566776642 112 3588988876555443 33 67889999888776543 2344578889999887765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
+..+.+.+.+.+++.++.+++........+.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 270 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLL 270 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHH
Confidence 4568889999999999999988776665543
No 146
>PRK11761 cysM cysteine synthase B; Provisional
Probab=65.38 E-value=57 Score=29.59 Aligned_cols=89 Identities=13% Similarity=0.036 Sum_probs=61.1
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccC-CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+..-||++ +-+..+...+.+ .| +.+|+.|+. ...+-.-..+.++|...|..+..+-|.........
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~-~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEK-RGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 56777765556667776 333333333444 45 467776655 45566777778888899986666666555567788
Q ss_pred HHhhcCCeEEEEcC
Q 015325 137 QIQLSNPVIAFATS 150 (409)
Q Consensus 137 ~l~~~~~~~ii~~~ 150 (409)
.++..++++++++.
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 89999999999986
No 147
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=65.12 E-value=69 Score=28.74 Aligned_cols=85 Identities=15% Similarity=0.060 Sum_probs=56.0
Q ss_pred HHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC----CHHHHHHHHhhcCCeEEEEcCc-
Q 015325 77 RRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----TESEISRQIQLSNPVIAFATSS- 151 (409)
Q Consensus 77 ~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~ii~~~~- 151 (409)
-|.-.+|..|++ .| -.|..++.+....... .+...|.....++... ..+++..++++.+++++|+|.-
T Consensus 18 ~Rcl~LA~~l~~-~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~ 90 (279)
T TIGR03590 18 MRCLTLARALHA-QG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYG 90 (279)
T ss_pred HHHHHHHHHHHH-CC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCC
Confidence 356788999976 44 3577766665554332 3467887776665432 3557888999999999999863
Q ss_pred ----hHHHHhhcCCeEEEeCC
Q 015325 152 ----VVHKLAKLKHRTILIDS 168 (409)
Q Consensus 152 ----~~~~~~~~~~~~~~~~~ 168 (409)
....+.....+++.+++
T Consensus 91 ~~~~~~~~~k~~~~~l~~iDD 111 (279)
T TIGR03590 91 LDADWEKLIKEFGRKILVIDD 111 (279)
T ss_pred CCHHHHHHHHHhCCeEEEEec
Confidence 23334444556777764
No 148
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=64.88 E-value=85 Score=26.47 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=52.3
Q ss_pred EEEEeCch--hhHHhH-HHHHHHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeEeechH------HHHHHHhCCCCCCCC
Q 015325 236 VMLFTMPY--FHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPP------IVVAMSKGGSTDGYD 305 (409)
Q Consensus 236 ~~l~~~p~--~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~------~l~~l~~~~~~~~~~ 305 (409)
+++...+. .|..|. ......-..|..++.. ....++.+.+.++++++.++.++-+ .+..+.+.......
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 44444443 677777 3334444567777755 4567899999999999999877642 22333332222111
Q ss_pred CCCcceeeecCCCCCHHHHH
Q 015325 306 LSSLETVACGAAPLGKDTIM 325 (409)
Q Consensus 306 l~~Lr~v~~~G~~~~~~~~~ 325 (409)
.+.+ .+++||.++++++.+
T Consensus 165 ~~~v-~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 165 RDSV-KFMVGGAPVTQDWAD 183 (197)
T ss_pred CCCC-EEEEEChhcCHHHHH
Confidence 1223 378899888865433
No 149
>PRK09274 peptide synthase; Provisional
Probab=64.56 E-value=55 Score=32.54 Aligned_cols=99 Identities=10% Similarity=0.039 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCC-CCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 190 CQSDVAAIMYSSGT-TGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGT-TG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
.++.++++....++ ....+...+|.+++...+..+...+ .+..++|++....+-+..+ ...+++++..|+..+.++
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEcC
Confidence 34566655432222 1222333688888877666655544 1578889998888765432 357889999999988875
Q ss_pred -CCCHHHHHHHHHHhcceeEeech
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
....+.+...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 46788899999999999888754
No 150
>PLN03013 cysteine synthase
Probab=64.41 E-value=58 Score=31.30 Aligned_cols=91 Identities=13% Similarity=0.048 Sum_probs=61.5
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccC-CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+-.-|+++= -+..+-....+ .| +++|...+|....+-.-+.+.+++...|..++.+=|.....+...
T Consensus 139 ~Iy~KlE~lNPtGSfKdR--~A~~~l~~a~~-~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~ 215 (429)
T PLN03013 139 NIAAKLEIMEPCCSVKDR--IGYSMVTDAEQ-KGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRV 215 (429)
T ss_pred eEEEEeccCCCccccHHH--HHHHHHHHHHH-cCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHH
Confidence 345555544556677772 23223333344 45 578855556666777777888888899987766666667778888
Q ss_pred HHhhcCCeEEEEcCc
Q 015325 137 QIQLSNPVIAFATSS 151 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (409)
.++..++++++++..
T Consensus 216 ~ira~GAeVi~v~~~ 230 (429)
T PLN03013 216 LLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCEEEEECCC
Confidence 899999999999754
No 151
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=63.58 E-value=1.2e+02 Score=27.98 Aligned_cols=164 Identities=10% Similarity=0.019 Sum_probs=76.5
Q ss_pred ccCCCCCCHHHHHHHHhh-cCCeEEEEcCchHHHHhhcCCeEEEeCCCcc---hhhhcccCCcccccccccCCCCEEEEE
Q 015325 123 SPANPVNTESEISRQIQL-SNPVIAFATSSVVHKLAKLKHRTILIDSPEF---DSMTMSWNSKHELDRAKVCQSDVAAIM 198 (409)
Q Consensus 123 v~l~~~~~~~~l~~~l~~-~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~i~ 198 (409)
+.+.++ ..+.+..+++. .++++||+|+-....-...+..+++++...- ..++..+.-- ++. ..-++.-+|+
T Consensus 122 v~v~~~-R~~~~~~l~~~~~~~diIi~DDG~Qh~rL~rD~eIvvvd~~r~fGng~~lPaGpLR---ep~-~rl~~ad~ii 196 (336)
T COG1663 122 VAVSPD-RKDAAKALLAAHLGCDIIVLDDGLQHYRLHRDFEIVVVDGQRGFGNGFLLPAGPLR---EPP-KRLKSADAII 196 (336)
T ss_pred EEEehh-HHHHHHHHHhhCCCCCEEEEcCcchhhHhhcceeEEEEeccccCCCcccccCCccc---CCh-hhhhcCcEEE
Confidence 344443 44455555553 7999999999877766666667777765332 2222222210 111 1122222334
Q ss_pred cCC-CCCCCcchhhhccHHHHHHHH-HhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHH-hCCeEE----Eec--CCC
Q 015325 199 YSS-GTTGRVKGVMLTHRNLTAAVA-SSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAA-LMETAV----VMQ--RFD 269 (409)
Q Consensus 199 ~TS-GTTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~-~G~~~v----~~~--~~~ 269 (409)
.-+ ++...|....+.......... ...... ...+...++.+.-..|...+ +.++- .|..++ +.+ .++
T Consensus 197 ~~g~~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~v~afaGIg~P~rF---f~tL~~~g~~~~~~~~FpDH~~f~ 272 (336)
T COG1663 197 TNGGGSRADPIPMRLAPGHAPNLVAPGERSDV-ADLKGKRVVAFAGIGNPQRF---FATLRNLGIQVVETLAFPDHYDFS 272 (336)
T ss_pred ecCCCccccchhhhhcccccceeeccceecch-hhcCCceEEEEEecCChHHH---HHHHHHcCcceeeeecCCchhhcc
Confidence 333 344444222222111111111 011111 12223556666666665544 33343 443333 333 366
Q ss_pred HHHHHHHHHHhcceeEeechHHHHHH
Q 015325 270 LKMMLKAVEEFRVTHAAVTPPIVVAM 295 (409)
Q Consensus 270 ~~~~~~~i~~~~~t~l~~~p~~l~~l 295 (409)
.+++..+..+.+...+.+|.--+-.+
T Consensus 273 ~~~l~~l~~~~~~~~Ll~TeKDaVKl 298 (336)
T COG1663 273 AADLEDLAKKAQADGLLTTEKDAVKL 298 (336)
T ss_pred HHHHHHHHhhhccceEEeeccceeec
Confidence 77777777777776666665433333
No 152
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=63.55 E-value=74 Score=31.60 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=65.2
Q ss_pred hhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeech
Q 015325 211 MLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
.+|.+.+...+..+...+ ...++|++...+|-..-+ ...+++++..|+..+.++ ....+.+...+++.+++.++...
T Consensus 45 ~~Ty~el~~~~~~lA~~L-~~~~gd~Val~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~ 122 (539)
T PRK06334 45 KLSYNQVRKAVIALATKV-SKYPDQHIGIMMPASAGA-YIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSK 122 (539)
T ss_pred cccHHHHHHHHHHHHHHH-hhccCCeEEEEcCCchHH-HHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehH
Confidence 379999988888887777 345788888888875442 357899999999988885 45778999999999999998877
Q ss_pred HHHHHH
Q 015325 290 PIVVAM 295 (409)
Q Consensus 290 ~~l~~l 295 (409)
..+..+
T Consensus 123 ~~~~~~ 128 (539)
T PRK06334 123 QLMQHL 128 (539)
T ss_pred HHHHHH
Confidence 665544
No 153
>PRK08315 AMP-binding domain protein; Validated
Probab=62.82 E-value=83 Score=31.27 Aligned_cols=83 Identities=4% Similarity=0.034 Sum_probs=60.1
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCC--CCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~--~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (409)
..+|+..+...+..+.. ..+++++|++....+- ...++..+++.+..|+..+..........+...+++.++.+
T Consensus 217 v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~ 292 (559)
T PRK08315 217 ATLTHRNILNNGYFIGE----AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTA 292 (559)
T ss_pred EEeeHHHHHHHHHHHHH----hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeE
Confidence 45888887655554433 2688999998877764 23344556888889988875566677888899999999999
Q ss_pred EEEcCchHH
Q 015325 146 AFATSSVVH 154 (409)
Q Consensus 146 ii~~~~~~~ 154 (409)
++.......
T Consensus 293 ~~~~P~~~~ 301 (559)
T PRK08315 293 LYGVPTMFI 301 (559)
T ss_pred EecchHHHH
Confidence 887765443
No 154
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=62.19 E-value=20 Score=28.29 Aligned_cols=41 Identities=5% Similarity=0.046 Sum_probs=32.5
Q ss_pred HHHHHHhHhccCCCCCCEEEEEcCC---CCchHHHHHHHHHhCCe
Q 015325 80 NSLASYLQNVTRLSKNDTAFVLSTN---SIEIPILYFSLLSLGVI 121 (409)
Q Consensus 80 ~~la~~L~~~~gv~~g~~V~i~~~~---~~~~~~~~~A~~~~G~~ 121 (409)
.++++.|.+ +|+.+++.|++++.. +.....++|++..+|..
T Consensus 81 ~~~~~~~~~-~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEA-KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 467888888 999999999999965 45566667788888854
No 155
>PRK08316 acyl-CoA synthetase; Validated
Probab=62.01 E-value=74 Score=31.16 Aligned_cols=86 Identities=12% Similarity=-0.053 Sum_probs=64.5
Q ss_pred hhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
..+|...+...+..+...+ .+..+++++....+-... .+..+++++..|+..+..+ ....+.+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 4578888776665554443 157788888888776553 3467889999999988886 46788999999999999998
Q ss_pred echHHHHHHH
Q 015325 287 VTPPIVVAMS 296 (409)
Q Consensus 287 ~~p~~l~~l~ 296 (409)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 156
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=61.85 E-value=64 Score=33.35 Aligned_cols=102 Identities=11% Similarity=-0.004 Sum_probs=73.0
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+ -+..++|++....+-..-+ +...++++..|+..+.+. ...++.+...+++.++..++.
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~ 184 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVIC 184 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEE
Confidence 367787776666554433 1678899888888765432 256788999999988774 578999999999999999999
Q ss_pred chHHHHHHHhCCCCCCCCCCCcceeeecCC
Q 015325 288 TPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (409)
Q Consensus 288 ~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~ 317 (409)
....+..+..... .+..++.+++-++
T Consensus 185 ~~~~~~~l~~~~~----~~~~l~~ii~~~~ 210 (696)
T PLN02387 185 DSKQLKKLIDISS----QLETVKRVIYMDD 210 (696)
T ss_pred CHHHHHHHHHHhh----ccCCceEEEEECC
Confidence 8888777765321 2345666655443
No 157
>PRK06839 acyl-CoA synthetase; Validated
Probab=59.96 E-value=1.1e+02 Score=29.72 Aligned_cols=96 Identities=14% Similarity=0.016 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC---CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
.++.++++. + ...+|+..+...+..+...+ .+..+++++....+-... ....+++++..|+..+..+
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecC
Confidence 456676653 1 34688888877776666544 157788988888877644 3357889999999988886
Q ss_pred -CCCHHHHHHHHHHhcceeEeechHHHHHH
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVVAM 295 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p~~l~~l 295 (409)
..+++.+...+++.+++.++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 46788999999999999999887765544
No 158
>PLN03052 acetate--CoA ligase; Provisional
Probab=59.91 E-value=84 Score=32.76 Aligned_cols=99 Identities=10% Similarity=0.025 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.+|++....+..|.+ ...+|.+.+...+..+...+ .+..++|++...+|..-- .+..+++++..|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEeeCC
Confidence 356677654332221211 23478888876666555443 168899999999997543 3367899999999988874
Q ss_pred CCCHHHHHHHHHHhcceeEeechH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~ 290 (409)
.+.++.+...+++.++..++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 588999999999999999988654
No 159
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=58.90 E-value=1.3e+02 Score=28.30 Aligned_cols=98 Identities=17% Similarity=0.154 Sum_probs=69.7
Q ss_pred CCCcEEEeCCC-------CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc-hHHHHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINSVT-------GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~-~~~~~~A~~~~G~~~v~l~~ 127 (409)
++.++++.--. ...+|+..+...+..+.. . .+++++|++....+-... .+..+++.+..|+..+..+.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---R-YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---h-cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 46667763211 145788888776666655 3 577889999888776654 34456788888988887776
Q ss_pred CCC--HHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 128 VNT--ESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 128 ~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
... ...+..++++.++..++........+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 554 678889999999999998887666554
No 160
>PRK07788 acyl-CoA synthetase; Validated
Probab=58.82 E-value=61 Score=32.21 Aligned_cols=85 Identities=8% Similarity=-0.036 Sum_probs=64.7
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+. +..++|++....+-.-. .+..+++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRG-FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4788888766655554441 57788998888776432 23678999999999998864 67899999999999999998
Q ss_pred chHHHHHHH
Q 015325 288 TPPIVVAMS 296 (409)
Q Consensus 288 ~p~~l~~l~ 296 (409)
.+.....+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 887666553
No 161
>PLN02565 cysteine synthase
Probab=58.74 E-value=70 Score=29.44 Aligned_cols=90 Identities=11% Similarity=0.015 Sum_probs=64.0
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+..-||++= -+..+-..+.+ .|. .+|....+....+-.-+.+.+++...|..++.+-|.........
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~-~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 107 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEE-KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRI 107 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHH-cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHH
Confidence 577766655566677764 23333333444 464 77866556666677777888899999998777777667788888
Q ss_pred HHhhcCCeEEEEcC
Q 015325 137 QIQLSNPVIAFATS 150 (409)
Q Consensus 137 ~l~~~~~~~ii~~~ 150 (409)
.++..++++++++.
T Consensus 108 ~i~~~GA~V~~~~~ 121 (322)
T PLN02565 108 ILLAFGAELVLTDP 121 (322)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999875
No 162
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=57.69 E-value=1.1e+02 Score=29.94 Aligned_cols=101 Identities=13% Similarity=0.031 Sum_probs=69.7
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
..++.++++.... .+.. -.+|..++...+..+...+ -+..++|++....+-+..+- ..+++++..|+..+..+
T Consensus 19 ~~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 19 VYGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPIN 93 (517)
T ss_pred HCCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcC
Confidence 3466677654321 1111 2367777766655554432 16788899988888765433 57789999999988775
Q ss_pred -CCCHHHHHHHHHHhcceeEeechHHHHH
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
...++.+...+++.+++.++..+.....
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 5788999999999999999888765443
No 163
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=57.67 E-value=4 Score=40.88 Aligned_cols=28 Identities=21% Similarity=0.322 Sum_probs=23.3
Q ss_pred CCCCEEEEEcCCCCC-CCcchhhhccHHH
Q 015325 190 CQSDVAAIMYSSGTT-GRVKGVMLTHRNL 217 (409)
Q Consensus 190 ~~~~~a~i~~TSGTT-G~pK~v~~s~~~l 217 (409)
.++.+.+...||||| |.+|-|++|.+.+
T Consensus 98 ~~~pi~~f~~SSGTT~g~~K~IP~T~~~l 126 (597)
T PLN02249 98 SSHPITEFLTSSGTSAGERKLMPTIEEDI 126 (597)
T ss_pred CCCchhhhcccCCCCCCceeEEeccHHHH
Confidence 345677889999999 8999999999654
No 164
>PRK07529 AMP-binding domain protein; Validated
Probab=57.40 E-value=70 Score=32.56 Aligned_cols=98 Identities=10% Similarity=-0.022 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~ 267 (409)
.++.+|++.+..+.. ..+...+|.+.+...+..+...+. +..++|++...+|-..-+ +..+++++..|..+.+.+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~~pi~~~ 115 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGIANPINPL 115 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCEEEeCCCc
Confidence 456677665433211 123456888888766665544441 678899999999876543 3567777788854333345
Q ss_pred CCHHHHHHHHHHhcceeEeech
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p 289 (409)
..++.+...+++.++..++...
T Consensus 116 ~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 116 LEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CCHHHHHHHHHhcCCcEEEEeC
Confidence 7899999999999999998853
No 165
>PRK13388 acyl-CoA synthetase; Provisional
Probab=56.80 E-value=1e+02 Score=30.64 Aligned_cols=84 Identities=13% Similarity=-0.037 Sum_probs=62.4
Q ss_pred hhccHHHHHHHHHhhccCC--CC-CCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 211 MLTHRNLTAAVASSFASSP--KR-VSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~-~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
.+|...+...+..+...+. +. .+++++...++-...+ +...++++..|+..+.++ ....+.+...+++.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 5788888776666655441 45 5778888888765442 357889999999998875 46788999999999999998
Q ss_pred echHHHHHH
Q 015325 287 VTPPIVVAM 295 (409)
Q Consensus 287 ~~p~~l~~l 295 (409)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876655443
No 166
>PRK05857 acyl-CoA synthetase; Validated
Probab=56.03 E-value=78 Score=31.41 Aligned_cols=95 Identities=17% Similarity=0.064 Sum_probs=68.3
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
..++.++++.. .| ...+|.+.+...+..+...+ .+..+++++....+-... .+...++++..|+..+.++
T Consensus 26 ~~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 26 QQPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMAD 97 (540)
T ss_pred hCCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecC
Confidence 34666766432 22 13478888877666665544 157788999888877544 3467899999999999886
Q ss_pred -CCCHHHHHHHHHHhcceeEeechHH
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTPPI 291 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p~~ 291 (409)
...++.+...++..++..++..+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 4678899999999999888877643
No 167
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=55.66 E-value=44 Score=33.19 Aligned_cols=90 Identities=11% Similarity=0.019 Sum_probs=72.1
Q ss_pred hhhhccHHHHHHHHHhhccCC----CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcce
Q 015325 209 GVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVT 283 (409)
Q Consensus 209 ~v~~s~~~l~~~~~~~~~~~~----~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t 283 (409)
+..+|+.++...+..++..+- +.+++|++....|-...+. ...+++...|+.+.-.. .++...+...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 677898888777776666652 2688999999999875443 46788899999887774 57999999999999999
Q ss_pred eEeechHHHHHHHhCC
Q 015325 284 HAAVTPPIVVAMSKGG 299 (409)
Q Consensus 284 ~l~~~p~~l~~l~~~~ 299 (409)
+++.....+..+....
T Consensus 122 iif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEAT 137 (537)
T ss_pred EEEEcCchHHHHHHHH
Confidence 9999988888776543
No 168
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=55.43 E-value=89 Score=31.03 Aligned_cols=86 Identities=12% Similarity=-0.008 Sum_probs=66.2
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+..+++++....|-...+ +..+++++..|+..+..+ ....+.+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 478888876666655544 1577888888888776543 467899999999998885 468899999999999999999
Q ss_pred chHHHHHHHh
Q 015325 288 TPPIVVAMSK 297 (409)
Q Consensus 288 ~p~~l~~l~~ 297 (409)
.......+..
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877665543
No 169
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=55.25 E-value=54 Score=30.94 Aligned_cols=59 Identities=12% Similarity=-0.023 Sum_probs=39.7
Q ss_pred HhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEE
Q 015325 85 YLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (409)
Q Consensus 85 ~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 148 (409)
.++. +++++||.|++-. ..+.....++...|+.++.++.+ .+.+.+...++. +.++|+.
T Consensus 62 ~l~a-l~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 62 AALL-LDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHH-cCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3455 6789999887744 45666667778889887777643 356667776653 5666664
No 170
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=54.91 E-value=41 Score=31.51 Aligned_cols=65 Identities=14% Similarity=0.089 Sum_probs=45.3
Q ss_pred HHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 015325 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 80 ~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 149 (409)
..+--.|.. +|+++||.|++- ...+....-|+..+|+.++.++-+ .+.+.+.+.++.-. ++|+..
T Consensus 51 ~Al~~al~~-l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRA-LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHH-TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHHh-cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 345556777 899999988875 556777888999999988888764 57888888876533 566553
No 171
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=54.63 E-value=17 Score=25.22 Aligned_cols=39 Identities=15% Similarity=0.162 Sum_probs=33.9
Q ss_pred HHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCe
Q 015325 83 ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (409)
Q Consensus 83 a~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~ 121 (409)
..+|++..|+++|+.++.+.....|.+..+=|++++.-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV 41 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADV 41 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhce
Confidence 567888789999999999988899999999999988754
No 172
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=54.60 E-value=99 Score=30.71 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.+|++..-. +.++...+|...+...+..+...+ .+..+++++...++-...+ ....++++..|+..+..+
T Consensus 37 ~p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecccc
Confidence 356677654322 223334678888876666655543 1678899998888865543 357889999999988775
Q ss_pred CCCHHHHHHHHHHhcceeEeechH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~ 290 (409)
....+.+...+++.+++.++....
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 467889999999999998887553
No 173
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=54.13 E-value=1e+02 Score=31.45 Aligned_cols=96 Identities=13% Similarity=0.025 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.+|++.... .. .....+|.+.+...+..+...+ .+..++|++...+|-.--+ +..+++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~-~~--~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-DP--GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-CC--CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCC
Confidence 467777654221 10 1234578888877666655544 1578899999988875443 357889999999988875
Q ss_pred CCCHHHHHHHHHHhcceeEeech
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
.+.++.+...+++.++..++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcC
Confidence 57889999999999999998754
No 174
>PRK12583 acyl-CoA synthetase; Provisional
Probab=54.09 E-value=1.7e+02 Score=28.99 Aligned_cols=82 Identities=9% Similarity=0.090 Sum_probs=58.9
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCC--CCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~--~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (409)
..+|+..+...+..+... .+++++|++....+- ....+..+++++..|+..+..........+.+.+++.++..
T Consensus 219 v~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~ 294 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES----LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTA 294 (558)
T ss_pred EEeeHHHHHHHHHHHHHH----hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeE
Confidence 468888886555544332 578889998877653 24455667788888988775455567888889999999999
Q ss_pred EEEcCchH
Q 015325 146 AFATSSVV 153 (409)
Q Consensus 146 ii~~~~~~ 153 (409)
++.....+
T Consensus 295 l~~~P~~~ 302 (558)
T PRK12583 295 LYGVPTMF 302 (558)
T ss_pred EeccHHHH
Confidence 88776554
No 175
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=54.07 E-value=1.1e+02 Score=27.70 Aligned_cols=90 Identities=11% Similarity=0.027 Sum_probs=58.8
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+..-||+. +-....+.. +.+ .|. .+|+.| +....+-.-..+-+++...|..+..+-|.........
T Consensus 23 ~i~~K~E~~~ptGS~K~-R~a~~~~~~-a~~-~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD-RIALSMIED-AEK-RGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred eEEEEEcccCCCCCccH-HHHHHHHHH-HHH-cCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 56666664455567775 222333444 444 453 677766 4555666777777888889986666666555566677
Q ss_pred HHhhcCCeEEEEcCc
Q 015325 137 QIQLSNPVIAFATSS 151 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (409)
.++..++++++++.+
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999998764
No 176
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=53.81 E-value=1.2e+02 Score=30.24 Aligned_cols=98 Identities=9% Similarity=0.039 Sum_probs=66.8
Q ss_pred CCCcEEEeC---CCC----ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc--hHHHHHHHHHhCCeEccCC
Q 015325 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (409)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~--~~~~~~A~~~~G~~~v~l~ 126 (409)
++.++++.- .+| ..+|+..+...+. ..... .+++++|++....+-... ....+++.+..|+..+...
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~---~~~~~-~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQ---TGKYV-LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHH---HHHHh-cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 456666632 112 3578887755433 33344 678889987665544322 2445778889999888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
.....+.+...+++.++.+++........+.
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7778999999999999999988876665543
No 177
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=53.77 E-value=1.1e+02 Score=31.23 Aligned_cols=94 Identities=14% Similarity=0.048 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-C
Q 015325 191 QSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-R 267 (409)
Q Consensus 191 ~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~ 267 (409)
++.+|++.... .|. ...+|.+.+...+..+...+ .+..++|++...+|..-- .+..+++++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE-TVVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCcEEEeeCCC
Confidence 46676654321 221 23478888776665554443 167889999999987543 3367899999999988775 5
Q ss_pred CCHHHHHHHHHHhcceeEeech
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p 289 (409)
+.++.+...+++.++..++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEcc
Confidence 7889999999999999888754
No 178
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=53.38 E-value=96 Score=31.46 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.+|++.... .+|. ...+|.+.+...+..+...+ .+..++|++...+|..-- .+..+++++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEeccCC
Confidence 456777654321 1222 23578888866665554443 167899999999887543 3367889999999988774
Q ss_pred CCCHHHHHHHHHHhcceeEeechH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~ 290 (409)
.+.++.+...+++.+++.++....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578899999999999999987653
No 179
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=53.16 E-value=63 Score=33.06 Aligned_cols=79 Identities=16% Similarity=0.083 Sum_probs=62.0
Q ss_pred hhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
..+|.+.+...+..+...+ .+..++|++...+|..--+ +..+++++..|+..+.+. .+.++.+...+++.+++.++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 3578888876665555443 1689999999999986443 357899999999987774 68899999999999999998
Q ss_pred ech
Q 015325 287 VTP 289 (409)
Q Consensus 287 ~~p 289 (409)
...
T Consensus 170 ~~~ 172 (647)
T PTZ00237 170 TTN 172 (647)
T ss_pred Ecc
Confidence 764
No 180
>PLN03051 acyl-activating enzyme; Provisional
Probab=53.05 E-value=1.4e+02 Score=29.34 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=64.4
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc-hHHHHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~-~~~~~~A~~~~G~~~v~l~~ 127 (409)
++.+|++-- -+ +..+|+..+...+... ... .++.++|++...++-... ....+++++..|+..+..+.
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~ 193 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAH-MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGG 193 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHh-cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCC
Confidence 466666532 11 2457887765543222 234 678889988776654432 23356788899998887765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHHHH
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (409)
....+.+...+++.++.++.........+
T Consensus 194 ~~~~~~~~~~i~~~~vt~~~~vP~~~~~l 222 (499)
T PLN03051 194 APLGRGFGKFVQDAGVTVLGLVPSIVKAW 222 (499)
T ss_pred CCCcHHHHHHHHHhCCcEEEeCHHHHHHH
Confidence 45667889999999999999877665544
No 181
>PLN02246 4-coumarate--CoA ligase
Probab=52.93 E-value=1.1e+02 Score=30.17 Aligned_cols=98 Identities=10% Similarity=-0.019 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++++... + +-.+|+..+...+..+...+ .+..++|++....+-+.. .+..+++++..|++.+.++
T Consensus 36 ~~~~~a~~~~~---~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDGA---T----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPE-FVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEecC---C----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHHcCEEEecCCC
Confidence 45667765321 1 23478888876665554433 267888998888776532 2356788899999988875
Q ss_pred CCCHHHHHHHHHHhcceeEeechHHHHHH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVAM 295 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~~l~~l 295 (409)
......+...+++.++..++........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 46788999999999999888776554433
No 182
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=52.84 E-value=68 Score=30.20 Aligned_cols=59 Identities=12% Similarity=-0.021 Sum_probs=39.9
Q ss_pred hHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 015325 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 86 L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 149 (409)
+.. .++++||.|++-.+ .+.....++...|+.++.++.+ .+.+++.+.++. ++++|+..
T Consensus 63 l~~-~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 63 ALL-LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHH-hCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 444 57889998877543 4555566778889987777642 457788877754 56666643
No 183
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=52.67 E-value=71 Score=31.28 Aligned_cols=84 Identities=11% Similarity=-0.021 Sum_probs=62.1
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+++...+..+...+. +..+++++....+-...+ +..+++++..|+..+..+ ...++.+...+++.+++.++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLET-VTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 4788887665555444431 567888888888775433 357889999999988775 468899999999999999988
Q ss_pred chHHHHHH
Q 015325 288 TPPIVVAM 295 (409)
Q Consensus 288 ~p~~l~~l 295 (409)
.+..+..+
T Consensus 104 ~~~~~~~~ 111 (515)
T TIGR03098 104 SSERLDLL 111 (515)
T ss_pred ccchhhhh
Confidence 77655443
No 184
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=52.40 E-value=1.1e+02 Score=30.49 Aligned_cols=97 Identities=10% Similarity=-0.054 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++++.... | ..+|++++...+..+...+ .+..+++++...++-...+ +..+++++..|+..+.++
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCc
Confidence 356666553221 2 3578888877766665544 1577889888887775543 257899999999988775
Q ss_pred CCCHHHHHHHHHHhcceeEeechHHHHH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
......+...+++.++..+......+..
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhhh
Confidence 4567889999999999988876655443
No 185
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=52.20 E-value=1.9e+02 Score=28.85 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=65.7
Q ss_pred CCCcEEEeC---CCC----ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCC-chHHHHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~-~~~~~~~A~~~~G~~~v~l~~ 127 (409)
++.++++.- .+| ..+|...+...+.... .. .++.++|++....|-.. ..+...++.+..|+..+.. +
T Consensus 171 ~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 171 PDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AI-VGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hh-cCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 567776632 112 4678887765444332 33 67889998888776433 2334567788889877665 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHHHH
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (409)
......+...+++.++.++.........+
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 274 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADL 274 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHH
Confidence 56888999999999999998887765544
No 186
>PLN02654 acetate-CoA ligase
Probab=51.92 E-value=66 Score=33.05 Aligned_cols=79 Identities=10% Similarity=0.027 Sum_probs=61.9
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+ .+.+++|++...+|..-- .+..+++++..|+..+.+. .+.++.+...+++.++..++.
T Consensus 120 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~ 198 (666)
T PLN02654 120 SLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVIT 198 (666)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Confidence 478888876666655543 168899999999987543 2357899999999988774 588999999999999999987
Q ss_pred chH
Q 015325 288 TPP 290 (409)
Q Consensus 288 ~p~ 290 (409)
...
T Consensus 199 ~~~ 201 (666)
T PLN02654 199 CNA 201 (666)
T ss_pred cCc
Confidence 654
No 187
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=51.28 E-value=1.6e+02 Score=29.70 Aligned_cols=96 Identities=14% Similarity=0.055 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++++.- .-.+|++.+...+..+...+ .+..+++++....+-...+ +..+++++..|+..+..+
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCC
Confidence 3566766541 13478888877666555443 1577889988888776443 367899999999988875
Q ss_pred CCCHHHHHHHHHHhcceeEeechHHHHHH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVAM 295 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~~l~~l 295 (409)
....+.+...+++.++..++........+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 46778899999999999998877655443
No 188
>PRK07798 acyl-CoA synthetase; Validated
Probab=50.44 E-value=1.6e+02 Score=28.92 Aligned_cols=85 Identities=7% Similarity=-0.144 Sum_probs=61.9
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+. +..++|++....+-.-. .+...++++..|+..+..+ ....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 106 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVY 106 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEE
Confidence 4788887666655544431 57778888887765432 2357788999999988775 467899999999999999988
Q ss_pred chHHHHHHH
Q 015325 288 TPPIVVAMS 296 (409)
Q Consensus 288 ~p~~l~~l~ 296 (409)
.......+.
T Consensus 107 ~~~~~~~~~ 115 (533)
T PRK07798 107 EREFAPRVA 115 (533)
T ss_pred chhhHHHHH
Confidence 876655544
No 189
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=50.26 E-value=1.2e+02 Score=27.50 Aligned_cols=91 Identities=12% Similarity=0.012 Sum_probs=59.0
Q ss_pred CCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccC-CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 57 DTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 57 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
.++.+..+..+..-||++=... ..+.. ..+ .| +.+|++| +....+-.-..+-+++.+.|..+..+-|........
T Consensus 21 ~~i~~K~E~~nptGS~K~R~a~-~~l~~-a~~-~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~ 96 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKDRIAL-NMIWD-AEK-RGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERR 96 (298)
T ss_pred ceEEEEEcccCCCCcchHHHHH-HHHHH-HHH-cCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHH
Confidence 3566666654555566653222 23333 333 46 4677766 555556677777778888998666665654445567
Q ss_pred HHHhhcCCeEEEEcCc
Q 015325 136 RQIQLSNPVIAFATSS 151 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~ 151 (409)
..++..++++++++..
T Consensus 97 ~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 97 KLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHcCCEEEEECCC
Confidence 8889999999999864
No 190
>PLN02574 4-coumarate--CoA ligase-like
Probab=50.20 E-value=1.6e+02 Score=29.32 Aligned_cols=99 Identities=22% Similarity=0.142 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC---CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
.++.++++.. .+| ..+|.+.+...+..+...+ .+..++|++....+-... .+..+++++..|+..+..+
T Consensus 52 ~~~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALIDS---STG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY-FPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEEC---CCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch-HHHHHHHHHHhCeEEeCcC
Confidence 3566666542 222 1368888766665555443 157889999988876533 2356789999999988875
Q ss_pred -CCCHHHHHHHHHHhcceeEeechHHHHHHH
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVVAMS 296 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~ 296 (409)
....+.+...+++.++..++..+..+..+.
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 467889999999999999988877665543
No 191
>PRK13383 acyl-CoA synthetase; Provisional
Probab=49.63 E-value=97 Score=30.44 Aligned_cols=85 Identities=12% Similarity=0.034 Sum_probs=62.9
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+. +..++|++....+-.-. .+..+++++..|+..+..+ ....+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4677777666555554441 57788988888875432 3357789999999999876 467899999999999999998
Q ss_pred chHHHHHHH
Q 015325 288 TPPIVVAMS 296 (409)
Q Consensus 288 ~p~~l~~l~ 296 (409)
.+...+.+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 877665543
No 192
>PLN03102 acyl-activating enzyme; Provisional
Probab=49.31 E-value=91 Score=31.31 Aligned_cols=82 Identities=11% Similarity=-0.034 Sum_probs=62.5
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+. ++.++|++...+|-.-. ....+++++..|+.++.++ ..+++.+...+++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 4788888766666555441 57889999888886432 2357889999999988875 478999999999999999998
Q ss_pred chHHHH
Q 015325 288 TPPIVV 293 (409)
Q Consensus 288 ~p~~l~ 293 (409)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 765543
No 193
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=49.07 E-value=15 Score=22.60 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=20.7
Q ss_pred cceeeecCCCCCHHHHHHHHHhC
Q 015325 309 LETVACGAAPLGKDTIMAFASKF 331 (409)
Q Consensus 309 Lr~v~~~G~~~~~~~~~~~~~~~ 331 (409)
=+++.++|.|++.++.+.++..|
T Consensus 21 d~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 21 DKWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HHheeeCCeeCCHHHHHHHHHHH
Confidence 37899999999999999998887
No 194
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.95 E-value=98 Score=30.92 Aligned_cols=84 Identities=12% Similarity=0.046 Sum_probs=64.2
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|+.++...+..+...+. +..++|++....+-... .+...++++..|+..+..+ ....+.+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 4788888766666555441 57788999888887544 2357889999999988775 578999999999999999998
Q ss_pred chHHHHHH
Q 015325 288 TPPIVVAM 295 (409)
Q Consensus 288 ~p~~l~~l 295 (409)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 195
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=48.87 E-value=1.6e+02 Score=27.84 Aligned_cols=87 Identities=14% Similarity=0.058 Sum_probs=58.2
Q ss_pred CcEEEeCCCCceeeHHH--HHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 58 TVALINSVTGLRVSFSE--FTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~e--l~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
.+++-.++-.-+-||++ ......+++...+. .| + +++..+-....+.+++.++|..+..+=|...+....
T Consensus 82 ~vyLK~E~lQpsgSFK~RGa~~~~~kla~~~~~-~g-----V--iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~ki 153 (457)
T KOG1250|consen 82 PVYLKREDLQPSGSFKIRGAGNALQKLAKQQKK-AG-----V--IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKI 153 (457)
T ss_pred ceEEEehhcccccceehhhHHHHHHHHHHhhhc-Cc-----e--EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHH
Confidence 34554443334555554 34444444443333 22 2 344455677888999999999888888888888888
Q ss_pred HHHhhcCCeEEEEcCch
Q 015325 136 RQIQLSNPVIAFATSSV 152 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~ 152 (409)
+.++..++.+++...+.
T Consensus 154 q~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 154 QRCRNLGATVILSGEDW 170 (457)
T ss_pred HHHhccCCEEEEecccH
Confidence 99999999999987654
No 196
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=48.77 E-value=1.5e+02 Score=27.12 Aligned_cols=90 Identities=12% Similarity=0.003 Sum_probs=60.3
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+..+..+..-|+++-. ....+.....+ |..+++.|+... .+-.-..+.++|...|..++.+-|..........
T Consensus 17 ~i~~K~E~~nptGS~K~R~-a~~~l~~a~~~--g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 17 NVFLKLENLQPSGSFKIRG-IGHLCQKSAKQ--GLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred eEEEEeccCCCcCChHHHH-HHHHHHHHHHh--hcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 5666666555566777532 23334443333 444466665554 4666677778899999877776666666777888
Q ss_pred HhhcCCeEEEEcCc
Q 015325 138 IQLSNPVIAFATSS 151 (409)
Q Consensus 138 l~~~~~~~ii~~~~ 151 (409)
++..++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999998765
No 197
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=48.46 E-value=37 Score=31.34 Aligned_cols=62 Identities=6% Similarity=-0.026 Sum_probs=46.2
Q ss_pred HHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 84 SYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 84 ~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
+.|+. .+++||++|+|..--+.-+++.++|-..- +-.+.++.+. +..+..++.+++.++...
T Consensus 157 ~alk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 157 RALKK-ANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred eehhh-cCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 34776 89999999999987788888888876544 8777777653 334456778888887754
No 198
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=48.34 E-value=1.2e+02 Score=31.10 Aligned_cols=86 Identities=9% Similarity=-0.079 Sum_probs=65.6
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+ .+..++|++...++-..-+ +...++++..|+..+.+. ...++.+...+++.+++.++.
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~ 155 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEE
Confidence 478888877766655544 1678899998888875443 356789999999988775 578899999999999999998
Q ss_pred chHHHHHHHh
Q 015325 288 TPPIVVAMSK 297 (409)
Q Consensus 288 ~p~~l~~l~~ 297 (409)
....+..+..
T Consensus 156 ~~~~~~~~~~ 165 (660)
T PLN02861 156 QESKISSILS 165 (660)
T ss_pred CHHHHHHHHH
Confidence 7776655543
No 199
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=48.15 E-value=82 Score=32.27 Aligned_cols=78 Identities=13% Similarity=0.008 Sum_probs=60.8
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|.+.+...+..+...+ .+..++|++...+|..-- ....+++++..|+..+... .+.++.+...+++.++..++.
T Consensus 114 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e-~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~ 192 (652)
T TIGR01217 114 PVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQ-AVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFT 192 (652)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 478888876666555544 168899999999988643 3357889999999988775 578899999999999999987
Q ss_pred ch
Q 015325 288 TP 289 (409)
Q Consensus 288 ~p 289 (409)
..
T Consensus 193 ~~ 194 (652)
T TIGR01217 193 VD 194 (652)
T ss_pred cc
Confidence 54
No 200
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=47.43 E-value=1.1e+02 Score=28.82 Aligned_cols=91 Identities=11% Similarity=0.021 Sum_probs=60.8
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+..+..+..-|+++=-.. ..+...+.+ --+++|....|....+-.-+.+.++|...|..+..+-|.....+....
T Consensus 75 ~I~~KlE~~nPtGS~KdR~A~-~~l~~a~~~-G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 152 (368)
T PLN02556 75 YIAAKQEMFQPTSSIKDRPAL-AMIEDAEKK-NLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVT 152 (368)
T ss_pred EEEEEecccCCccchHHHHHH-HHHHHHHHc-CCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 455555544444566652222 234444443 236778544555667777788888999999877777676677777889
Q ss_pred HhhcCCeEEEEcC
Q 015325 138 IQLSNPVIAFATS 150 (409)
Q Consensus 138 l~~~~~~~ii~~~ 150 (409)
++..++++++++.
T Consensus 153 lr~~GA~Vi~~~~ 165 (368)
T PLN02556 153 MRAFGAELVLTDP 165 (368)
T ss_pred HHHcCCEEEEECC
Confidence 9999999999874
No 201
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=47.27 E-value=95 Score=30.83 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=70.8
Q ss_pred CCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC---CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEe-cC
Q 015325 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QR 267 (409)
Q Consensus 192 ~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~ 267 (409)
+..+ ++|-+-.++. -.+|.+.+......+...+ .+. ++|++...+|..--. ...++++...|+..... ..
T Consensus 25 ~~~a-ii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~ 98 (528)
T COG0365 25 DDTA-IIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPG 98 (528)
T ss_pred CceE-EEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccC
Confidence 3444 4554433333 4578888776665555544 245 999999999996543 35788899999876555 57
Q ss_pred CCHHHHHHHHHHhcceeEeechHHHHHHH
Q 015325 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMS 296 (409)
Q Consensus 268 ~~~~~~~~~i~~~~~t~l~~~p~~l~~l~ 296 (409)
+.++.+...+.+-++.+++.....++..-
T Consensus 99 f~~~al~~Ri~d~~~k~vit~d~~~~~gk 127 (528)
T COG0365 99 LSAEAVADRIADLGPKVLIADDGTFRNGK 127 (528)
T ss_pred CCHHHHHHHHHccCCCEEEEecccccccc
Confidence 89999999999999999998777666443
No 202
>PRK05850 acyl-CoA synthetase; Validated
Probab=47.04 E-value=1.8e+02 Score=29.06 Aligned_cols=84 Identities=11% Similarity=-0.058 Sum_probs=61.7
Q ss_pred hhhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC----CCHHHHHHHHHHhcce
Q 015325 210 VMLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVT 283 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t 283 (409)
..+|+..+...+..+...+. + .++|++....+-... .+..+++++..|+..+.++. ...+.+...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~-~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLE-YIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCccc-HHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 35788888766655544441 3 467888888886532 33678999999999998863 3567899999999999
Q ss_pred eEeechHHHHHH
Q 015325 284 HAAVTPPIVVAM 295 (409)
Q Consensus 284 ~l~~~p~~l~~l 295 (409)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766554
No 203
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=47.03 E-value=1.8e+02 Score=29.86 Aligned_cols=100 Identities=8% Similarity=-0.058 Sum_probs=69.0
Q ss_pred hccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeec
Q 015325 212 LTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVT 288 (409)
Q Consensus 212 ~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~ 288 (409)
+|.+.+...+..+...+ .+..++|++...++-..-. +...++++..|+..+.+. ...++.+...+++.+++.++..
T Consensus 77 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~ 155 (660)
T PLN02430 77 KTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQ 155 (660)
T ss_pred EEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEEC
Confidence 57887776665555443 1678899988888875442 246788999999888774 5788999999999999999988
Q ss_pred hHHHHHHHhCCCCCCCCCCCcceeeec
Q 015325 289 PPIVVAMSKGGSTDGYDLSSLETVACG 315 (409)
Q Consensus 289 p~~l~~l~~~~~~~~~~l~~Lr~v~~~ 315 (409)
...+..++.... ...+.++.++.-
T Consensus 156 ~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 156 DKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred HHHHHHHHhhhc---ccCCCceEEEEE
Confidence 765544443211 112346665543
No 204
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.01 E-value=1.6e+02 Score=29.29 Aligned_cols=94 Identities=13% Similarity=-0.003 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC---CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
.++.+|++. . + ..+|+..+...+..+...+ .+..++|++...++-...+ +..+++++..|+..+..+
T Consensus 37 ~p~~~al~~--~---~----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L---G----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C---C----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecC
Confidence 456676653 1 1 3478888877777666544 1578889999988875432 357889999999998875
Q ss_pred -CCCHHHHHHHHHHhcceeEeechHHHH
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVV 293 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p~~l~ 293 (409)
.+..+.+...+++.++..++.......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhh
Confidence 467899999999999999987655443
No 205
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=47.00 E-value=1.4e+02 Score=27.08 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
+++|+ .+|=...+---+.+.+.|...|..++.+=|..-..+...+|+..++.+++++.
T Consensus 59 l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 88898 44545556667777788888898888877777778889999999999999987
No 206
>PRK09088 acyl-CoA synthetase; Validated
Probab=46.87 E-value=1.6e+02 Score=28.54 Aligned_cols=92 Identities=14% Similarity=0.007 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++++....| ..+|..++...+..+...+ .+..+++++....+-...+ +...++++..|+..+.++
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCc
Confidence 3566665433223 2478888866665544433 1577889988888876543 356799999999988875
Q ss_pred CCCHHHHHHHHHHhcceeEeech
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
...++.+...+++.+++.++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 46789999999999999987755
No 207
>PLN02614 long-chain acyl-CoA synthetase
Probab=46.82 E-value=1.3e+02 Score=30.92 Aligned_cols=86 Identities=10% Similarity=-0.125 Sum_probs=64.9
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ -+..++|++...++-..-+ +...++++..|+..+.+. ...++.+...+++.+++.++.
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~ 157 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFV 157 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEE
Confidence 357887766665554443 1678899998888875432 357889999999988875 578899999999999999999
Q ss_pred chHHHHHHHh
Q 015325 288 TPPIVVAMSK 297 (409)
Q Consensus 288 ~p~~l~~l~~ 297 (409)
....+..+..
T Consensus 158 ~~~~~~~~~~ 167 (666)
T PLN02614 158 EEKKISELFK 167 (666)
T ss_pred CHHHHHHHHH
Confidence 8776665543
No 208
>PRK07514 malonyl-CoA synthase; Validated
Probab=46.79 E-value=1.1e+02 Score=29.79 Aligned_cols=85 Identities=9% Similarity=-0.034 Sum_probs=62.6
Q ss_pred hhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
..+|...+...+..+...+ .+..++|++....+-... ....+++++..|+..+..+ ......+...+++.+++.+.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e-~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPE-ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 3577777765555544433 157888998888887533 3367889999999988775 46789999999999999998
Q ss_pred echHHHHHH
Q 015325 287 VTPPIVVAM 295 (409)
Q Consensus 287 ~~p~~l~~l 295 (409)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887665543
No 209
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.70 E-value=1.1e+02 Score=30.34 Aligned_cols=85 Identities=9% Similarity=-0.033 Sum_probs=63.9
Q ss_pred hhccHHHHHHHHHhhccC--C-CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 211 MLTHRNLTAAVASSFASS--P-KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
.+|...+...+..+...+ . +..+++++....+-.- -.+..+++++..|+..+.++ ...+..+...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 378888766665555443 1 5778898888887653 33467899999999988875 46789999999999999999
Q ss_pred echHHHHHHH
Q 015325 287 VTPPIVVAMS 296 (409)
Q Consensus 287 ~~p~~l~~l~ 296 (409)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877665554
No 210
>PRK13391 acyl-CoA synthetase; Provisional
Probab=46.63 E-value=2e+02 Score=28.16 Aligned_cols=97 Identities=14% Similarity=0.034 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++.+...+| -.+|...+...+..+...+. +..+++++....+-...+ +..+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 4566776654432 23788887666655554431 577788888887775443 356889999999998875
Q ss_pred CCCHHHHHHHHHHhcceeEeechHHHHH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
..+...+...+++.++..+...+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 4678999999999999999888765543
No 211
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=46.38 E-value=1.2e+02 Score=34.32 Aligned_cols=99 Identities=8% Similarity=-0.125 Sum_probs=68.2
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
..++.+|++...+...+......+|++.+...+..+...+ .+..+++++...++-...+ +..+++++..|+..+.++
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpld 326 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVID 326 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccC
Confidence 3567777764322111111234589998877776665554 1578889988888876443 367899999999998886
Q ss_pred C-CCHHHHHHHHHHhcceeEeec
Q 015325 267 R-FDLKMMLKAVEEFRVTHAAVT 288 (409)
Q Consensus 267 ~-~~~~~~~~~i~~~~~t~l~~~ 288 (409)
. ..++.+...+++.++..++..
T Consensus 327 p~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 327 PAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCCcHHHHHHHHHhcCCCEEEEe
Confidence 4 567888888898888877764
No 212
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=46.30 E-value=1.7e+02 Score=25.82 Aligned_cols=78 Identities=10% Similarity=0.157 Sum_probs=48.2
Q ss_pred eHHHHHH-HHHHHHHHhHhccC-CCCCCEEEEEcCCCCchHHHHHHHHHh------C--CeEccCCCCC---CHHHHHHH
Q 015325 71 SFSEFTR-RTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSL------G--VIISPANPVN---TESEISRQ 137 (409)
Q Consensus 71 Ty~el~~-~~~~la~~L~~~~g-v~~g~~V~i~~~~~~~~~~~~~A~~~~------G--~~~v~l~~~~---~~~~l~~~ 137 (409)
++..+.+ ..+++.+.+.+ .+ +.+|++|+|...-+.++++++..+... | ..++.++... ..+.+..+
T Consensus 4 ~~~~~~~~~~~~v~~~i~~-~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~ 82 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIAD-FNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEY 82 (258)
T ss_pred chhHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHH
Confidence 3444444 23555666776 44 578999999999999999887766443 1 3555566532 33445556
Q ss_pred HhhcCCeEEEEc
Q 015325 138 IQLSNPVIAFAT 149 (409)
Q Consensus 138 l~~~~~~~ii~~ 149 (409)
.++.+..+.+.+
T Consensus 83 ~~~lgI~~~v~~ 94 (258)
T PRK10696 83 LESLGVPYHIEE 94 (258)
T ss_pred HHHhCCCEEEEE
Confidence 666665555443
No 213
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=45.70 E-value=1.6e+02 Score=28.46 Aligned_cols=56 Identities=9% Similarity=0.094 Sum_probs=28.3
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHH----HHHHHhhcCCeEEEEcC
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESE----ISRQIQLSNPVIAFATS 150 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~----l~~~l~~~~~~~ii~~~ 150 (409)
.|.+|+|+++....+-++-+ +..+|..++.+-....... ++..+.....+.++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~-L~elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRF-VLENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHH-HHHCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 47788888764332222222 2367877644444433333 33334554555655543
No 214
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=45.63 E-value=2.2e+02 Score=28.88 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.+|++.. +..+|.- -.+|.+.+...+..+...+ .+..++|++...+|..-- .+..+++++..|+..+...
T Consensus 65 ~p~~~Al~~~-~~~~~~~--~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQE--RTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEEE-cCCCCce--EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEEecCC
Confidence 3566765542 2222321 2478888876665554443 168899999999988643 3357889999999987774
Q ss_pred CCCHHHHHHHHHHhcceeEeech
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
.+.++.+...+++.++..++...
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 57889999999999999888754
No 215
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=45.00 E-value=1.5e+02 Score=29.38 Aligned_cols=90 Identities=9% Similarity=0.030 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++++. . +| ..+|.+.+...+..+...+ .+..++|++....|-.-. .+..+++++..|+..+..+
T Consensus 36 ~pd~~a~~~-~---~~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVVD-N---HG----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE-FTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEEc-C---CC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccch
Confidence 456676543 2 22 3478888876665554443 267889999888876543 2367899999999888775
Q ss_pred CCCHHHHHHHHHHhcceeEeec
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVT 288 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~ 288 (409)
....+.+...+++.++..++..
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 4678889999999999888764
No 216
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.80 E-value=1.7e+02 Score=29.04 Aligned_cols=87 Identities=14% Similarity=0.024 Sum_probs=58.5
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc-hHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~-~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (409)
..+|...+...+ .+..+....++.++|++..+.+-... .....++++..|+..+...+....+.+..++++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 457776664322 22233222688899988877664322 223346778899888777777788999999999999998
Q ss_pred EEcCchHHHH
Q 015325 147 FATSSVVHKL 156 (409)
Q Consensus 147 i~~~~~~~~~ 156 (409)
.........+
T Consensus 272 ~~~P~~~~~l 281 (539)
T PRK07008 272 AGVPTVWLGL 281 (539)
T ss_pred EechHHHHHH
Confidence 8776655444
No 217
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=44.70 E-value=1e+02 Score=30.11 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=43.5
Q ss_pred CCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec----CCCHHHHHHHHHHhcceeEeechHH
Q 015325 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ----RFDLKMMLKAVEEFRVTHAAVTPPI 291 (409)
Q Consensus 231 ~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~p~~ 291 (409)
..++|++++--|-++.. .-..-..|..++-++ +.+++.+...++++++..++.+|++
T Consensus 176 ~~pGd~v~vE~PtY~~~----~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDPTYPGA----LQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCCCcHHH----HHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 56899999999987642 222334567776663 4789999999999999999999863
No 218
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=44.56 E-value=2.1e+02 Score=28.88 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=66.2
Q ss_pred eeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHH----HHHHHHhCC--eEccCCC------CCCHHHHHH
Q 015325 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL----YFSLLSLGV--IISPANP------VNTESEISR 136 (409)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~----~~A~~~~G~--~~v~l~~------~~~~~~l~~ 136 (409)
.....++.+.+.+++..+.+ +++|.|+..-..+-+.+ ..++-+.|+ +...++. .++.+.+..
T Consensus 49 P~~l~~m~~a~~ri~~ai~~------~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~ 122 (575)
T PRK11070 49 WQQLSGIEKAVELLYNALRE------GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQ 122 (575)
T ss_pred hHHhhCHHHHHHHHHHHHHC------CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHH
Confidence 35678888888888888876 67899998877765544 456677887 3334443 577788887
Q ss_pred HHhhcCCeEEEEcCc------hHHHHhhcCCeEEEeCCC
Q 015325 137 QIQLSNPVIAFATSS------VVHKLAKLKHRTILIDSP 169 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~------~~~~~~~~~~~~~~~~~~ 169 (409)
+.+ .+++++|+.+. ....+.+.++.++++|..
T Consensus 123 ~~~-~~~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 123 AHA-RGAQLIVTVDNGISSHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred HHh-cCCCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCC
Confidence 665 47888887653 334446778888888754
No 219
>PRK08162 acyl-CoA synthetase; Validated
Probab=44.52 E-value=1.1e+02 Score=30.32 Aligned_cols=84 Identities=8% Similarity=-0.054 Sum_probs=64.1
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+...+|++....+-...+ +..+++++..|+..+..+ ......+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 478888876666655544 1578889998888876533 357889999999888775 467899999999999999998
Q ss_pred chHHHHHH
Q 015325 288 TPPIVVAM 295 (409)
Q Consensus 288 ~p~~l~~l 295 (409)
.+..+..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87665543
No 220
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=44.34 E-value=1.2e+02 Score=30.07 Aligned_cols=95 Identities=14% Similarity=0.040 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC---CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
.++.++++.. | -.+|+..+...+..+...+ .+..+++++....|-...+ +..+++++..|+..+.++
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccC
Confidence 3566776532 2 2478888876666655432 1678889988888775432 357899999999999775
Q ss_pred -CCCHHHHHHHHHHhcceeEeechHHHHH
Q 015325 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
.+.+..+...+.+.+++.++........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 5678999999999999999887655443
No 221
>PRK07470 acyl-CoA synthetase; Validated
Probab=43.63 E-value=2.4e+02 Score=27.74 Aligned_cols=100 Identities=10% Similarity=0.070 Sum_probs=62.6
Q ss_pred CCCcEEEeCCC-------CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCC-C
Q 015325 56 DDTVALINSVT-------GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN-P 127 (409)
Q Consensus 56 p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~-~ 127 (409)
++.++++.--+ +..+|...+...+......+. .+..++|++..+++-...+-...+..+..|+..+.++ .
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 46677764211 245888887544332222222 2567888888888765443333344455666555443 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
..+.+++...+++.++.++.........+.
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 567888999999999999998877665553
No 222
>PRK08308 acyl-CoA synthetase; Validated
Probab=43.59 E-value=2.4e+02 Score=26.62 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=66.1
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCC--chHHHHHHHHHhCCeEccCC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~--~~~~~~~A~~~~G~~~v~l~ 126 (409)
++.++++.- .+ +..+|++.+...+..+.. . .++..+|++...++-.. .++..++..+..|+..+..+
T Consensus 100 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~---~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 100 AEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNE---A-LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHH---h-hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 556666542 11 246899888765554443 3 56678898877776543 33456788889998877665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
. .....+...+++.++.+++..+.....+.
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 205 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPLMLHILG 205 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHHHHHHHH
Confidence 4 46778888899999998888776655443
No 223
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=42.84 E-value=44 Score=25.07 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=31.3
Q ss_pred HHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCC
Q 015325 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGV 120 (409)
Q Consensus 80 ~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~ 120 (409)
..+...+.. .|+.+++.|++++..+.....+.+.+..+|.
T Consensus 64 ~~~~~~~~~-~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAA-LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 345566776 8888999999999888777777777778886
No 224
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=42.73 E-value=1.3e+02 Score=23.69 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=50.4
Q ss_pred hhhHHhH-HHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeech------HHHHHHHhCCCCCCCCCCCcceeee
Q 015325 243 YFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTP------PIVVAMSKGGSTDGYDLSSLETVAC 314 (409)
Q Consensus 243 ~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p------~~l~~l~~~~~~~~~~l~~Lr~v~~ 314 (409)
-.|..|. ......-..|..++... ...++++.+.+.++++.++..+- ..+..+....... .++.+ .+++
T Consensus 14 D~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~--~~~~~-~i~v 90 (137)
T PRK02261 14 DCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA--GLGDI-LLYV 90 (137)
T ss_pred ChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc--CCCCC-eEEE
Confidence 3567777 33444446777777775 46789999999999999987763 2333333332222 23344 4666
Q ss_pred cCCCC-C----HHHHHHHHHh
Q 015325 315 GAAPL-G----KDTIMAFASK 330 (409)
Q Consensus 315 ~G~~~-~----~~~~~~~~~~ 330 (409)
||... + .+..+++++.
T Consensus 91 GG~~~~~~~~~~~~~~~l~~~ 111 (137)
T PRK02261 91 GGNLVVGKHDFEEVEKKFKEM 111 (137)
T ss_pred ECCCCCCccChHHHHHHHHHc
Confidence 66553 3 3444556554
No 225
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.70 E-value=1.5e+02 Score=28.95 Aligned_cols=83 Identities=8% Similarity=-0.089 Sum_probs=61.2
Q ss_pred hccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeec
Q 015325 212 LTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVT 288 (409)
Q Consensus 212 ~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~ 288 (409)
+|..++...+..+...+ .+..++|++....+-... .+..+++++..|+..+..+ ......+...+++.+++.++..
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 67777755555544443 157888998888887643 3457899999999988875 4677889999999999999887
Q ss_pred hHHHHHH
Q 015325 289 PPIVVAM 295 (409)
Q Consensus 289 p~~l~~l 295 (409)
......+
T Consensus 91 ~~~~~~~ 97 (502)
T PRK08276 91 AALADTA 97 (502)
T ss_pred cchhhHH
Confidence 7665544
No 226
>PRK06188 acyl-CoA synthetase; Validated
Probab=42.36 E-value=1.6e+02 Score=28.95 Aligned_cols=84 Identities=11% Similarity=0.075 Sum_probs=62.6
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAF 147 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 147 (409)
..+|+..+...+.. .... .++..++++...++-...+...+++.+..|+..+..+. .....+...+++.++.+++
T Consensus 186 v~~s~~~l~~~~~~---~~~~-~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 260 (524)
T PRK06188 186 VMGTHRSIATMAQI---QLAE-WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATF 260 (524)
T ss_pred eeeehHHHHHHHHH---HHhh-cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEE
Confidence 45788877765543 3344 67888999988888776666667788888988777764 5678889999999999998
Q ss_pred EcCchHHHH
Q 015325 148 ATSSVVHKL 156 (409)
Q Consensus 148 ~~~~~~~~~ 156 (409)
........+
T Consensus 261 ~~P~~l~~l 269 (524)
T PRK06188 261 LVPTMIYAL 269 (524)
T ss_pred ehHHHHHHH
Confidence 877655444
No 227
>PRK10717 cysteine synthase A; Provisional
Probab=41.10 E-value=2.3e+02 Score=26.04 Aligned_cols=90 Identities=10% Similarity=-0.043 Sum_probs=57.6
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccC-CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+..-||+.-- ....+...+. .| +++|+.|+. ...+-.-..+.+++...|..+..+=|.........
T Consensus 29 ~i~~K~E~~nptGS~K~Rg-a~~~v~~a~~--~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~ 104 (330)
T PRK10717 29 EILGKAEFLNPGGSVKDRA-ALNIIWDAEK--RGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKD 104 (330)
T ss_pred eEEEEeeccCCCCCchHHH-HHHHHHHHHH--cCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH
Confidence 5666666444555565422 2223333333 35 466776544 55666777777888889986655555555566788
Q ss_pred HHhhcCCeEEEEcCc
Q 015325 137 QIQLSNPVIAFATSS 151 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (409)
.++..++++++++..
T Consensus 105 ~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 105 LLRALGAELVLVPAA 119 (330)
T ss_pred HHHHcCCEEEEeCCc
Confidence 899999999998853
No 228
>PRK13390 acyl-CoA synthetase; Provisional
Probab=40.96 E-value=2.6e+02 Score=27.28 Aligned_cols=93 Identities=12% Similarity=-0.037 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.++++... +| -.+|...+...+..+...+. +..++|++....+-+..+ +..+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEecccc
Confidence 45666654422 22 24788888776666555441 578889988887775432 357899999999888775
Q ss_pred CCCHHHHHHHHHHhcceeEeechH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~ 290 (409)
...+..+...+++.++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 467888999999988888876543
No 229
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=40.56 E-value=1.2e+02 Score=28.71 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=40.8
Q ss_pred HHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC-----CCHHHHHHHHhhcCCeEEE
Q 015325 81 SLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAF 147 (409)
Q Consensus 81 ~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 147 (409)
.+...|.. +++++||.|++-.+ .+.....++...|+.++.++.+ .+.+.+...++. +.++|+
T Consensus 60 al~lal~a-l~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMA-LGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHH-cCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445566 77899998776543 4555556777889888776542 466778777754 556665
No 230
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=40.36 E-value=94 Score=28.69 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=37.5
Q ss_pred HHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCC
Q 015325 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS 168 (409)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 168 (409)
+.+.+ +.|.+.++ ..+....++++..+++||.|+.+....-..+..++.++.
T Consensus 103 a~~~~-~~V~V~~d-R~~~~~~~~~~~~~dviilDDGfQh~~L~rDl~Ivl~D~ 154 (326)
T PF02606_consen 103 ARKLP-VPVIVGPD-RVAAARAALKEFPADVIILDDGFQHRRLKRDLDIVLVDA 154 (326)
T ss_pred HHhcC-CcEEEeCc-HHHHHHHHHHHCCCCEEEEcCCcccccccCCcEEEEEeC
Confidence 33455 66666665 667778888888899999999877666555677777763
No 231
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=40.28 E-value=1.3e+02 Score=30.48 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
.++.+|++. .+..+|. .-.+|.+.+...+..+...+ .+..++|++...+|..-- .+..+++++..|+..+...
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCC
Confidence 356666543 2222222 23468888766655544433 168899999999887543 2357899999999887774
Q ss_pred CCCHHHHHHHHHHhcceeEeech
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
.+.++.+...+++.++..++...
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 57889999999999999988754
No 232
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=40.07 E-value=3.1e+02 Score=25.49 Aligned_cols=202 Identities=10% Similarity=0.065 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC---------CCHHHHHHHHhhcCC
Q 015325 73 SEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV---------NTESEISRQIQLSNP 143 (409)
Q Consensus 73 ~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~---------~~~~~l~~~l~~~~~ 143 (409)
.++......++..|.+ . +-|.|.+++ +..+.+++.+|+...+...+-+... .+.+..++++.+.--
T Consensus 50 ~~~~~~~~~~~~~~~~-~---~Pd~Vlv~G-D~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 50 KSTGLAIIELADVLER-E---KPDAVLVLG-DRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHHH-H---T-SEEEEET-TSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHHHh-c---CCCEEEEEc-CCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhhh
Confidence 5566777888888887 3 347666555 7899999999999999999998877 677888888887764
Q ss_pred eEEEEcCchHHHHhhcC---CeEEEeCCCcchhhhcccCCccccc---cc-ccCCCCEEEEEcCCCCCCC-cchhhhccH
Q 015325 144 VIAFATSSVVHKLAKLK---HRTILIDSPEFDSMTMSWNSKHELD---RA-KVCQSDVAAIMYSSGTTGR-VKGVMLTHR 215 (409)
Q Consensus 144 ~~ii~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~a~i~~TSGTTG~-pK~v~~s~~ 215 (409)
-+....+.....+.+.+ -+++..+.+.++.+........... .. ...++..+++.+-.-|... |. ..+
T Consensus 125 lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~----~~~ 200 (346)
T PF02350_consen 125 LHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPE----RLE 200 (346)
T ss_dssp EEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH------HH
T ss_pred hhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChH----HHH
Confidence 44444444455555443 3677888777666644322111111 11 1134445555554444332 22 112
Q ss_pred HHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhH--HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHH
Q 015325 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL--FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIV 292 (409)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l 292 (409)
.+...+..+.+. .+-.+++..|......- ...+..+ ..+.+.+......++.+++...+-+.-.. .+.
T Consensus 201 ~i~~~l~~L~~~-----~~~~vi~~~hn~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdSs-GI~ 270 (346)
T PF02350_consen 201 QILEALKALAER-----QNVPVIFPLHNNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDSS-GIQ 270 (346)
T ss_dssp HHHHHHHHHHHH-----TTEEEEEE--S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESSH-HHH
T ss_pred HHHHHHHHHHhc-----CCCcEEEEecCCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcCc-cHH
Confidence 333333333222 22234444442222111 2233333 27777777778899999986555433333 444
No 233
>PRK06164 acyl-CoA synthetase; Validated
Probab=39.89 E-value=2.8e+02 Score=27.32 Aligned_cols=96 Identities=11% Similarity=0.072 Sum_probs=66.3
Q ss_pred CCCcEEEeC---CCC----ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc-hHHHHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~-~~~~~~A~~~~G~~~v~l~~ 127 (409)
++.++++.- .+| ..+|...+...+..++.. .++.+++++...+|-... .+..+++++..|+..+..+
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 254 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARA----YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEP- 254 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecC-
Confidence 456676652 112 457888887666554443 567889998888775432 3345678888888877654
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHHHH
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (409)
......+...+++.++.+++........+
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l 283 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRI 283 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHH
Confidence 56778889999999999998877665544
No 234
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=39.75 E-value=66 Score=23.48 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=36.3
Q ss_pred eeeHHHHHHH----HHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCe
Q 015325 69 RVSFSEFTRR----TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (409)
Q Consensus 69 ~~Ty~el~~~----~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~ 121 (409)
.+.+.++... ...+...+.. .++.+++.|++++.++.....+.+.+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGF-PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcc-cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 3455555432 2356666666 78888899999999888777777777888863
No 235
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=39.70 E-value=14 Score=16.91 Aligned_cols=10 Identities=30% Similarity=0.627 Sum_probs=7.4
Q ss_pred ccCcccccce
Q 015325 339 AYGLTESTAG 348 (409)
Q Consensus 339 ~yG~tE~~~~ 348 (409)
+||+|++.+.
T Consensus 1 GYGSTqTA~~ 10 (16)
T PF00818_consen 1 GYGSTQTAGE 10 (16)
T ss_pred CCCcccccCC
Confidence 5899988653
No 236
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=39.13 E-value=1.6e+02 Score=29.26 Aligned_cols=83 Identities=11% Similarity=-0.006 Sum_probs=62.6
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|+.++...+..+...+ .+..++|++....+-...+ +...++++..|+..+..+ ....+.+...+++.+++.++.
T Consensus 48 ~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~ 126 (557)
T PRK07059 48 AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVV 126 (557)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEE
Confidence 578888877666655543 1577889988887775433 356799999999998775 467899999999999999988
Q ss_pred chHHHHH
Q 015325 288 TPPIVVA 294 (409)
Q Consensus 288 ~p~~l~~ 294 (409)
.......
T Consensus 127 ~~~~~~~ 133 (557)
T PRK07059 127 LENFATT 133 (557)
T ss_pred chhhHHH
Confidence 7665443
No 237
>PRK06178 acyl-CoA synthetase; Validated
Probab=39.10 E-value=1.7e+02 Score=29.12 Aligned_cols=85 Identities=9% Similarity=0.004 Sum_probs=64.0
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|..++...+..+...+ .+..+++++....+-...+ +...++++..|+..+..+ ......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF-HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH-HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 478888876666554433 1567888888887776542 357888999999888775 467889999999999999999
Q ss_pred chHHHHHHH
Q 015325 288 TPPIVVAMS 296 (409)
Q Consensus 288 ~p~~l~~l~ 296 (409)
.+..+..+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887766554
No 238
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=38.87 E-value=1.4e+02 Score=28.89 Aligned_cols=55 Identities=9% Similarity=0.117 Sum_probs=37.6
Q ss_pred CCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 015325 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 91 gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 149 (409)
++++||.|++-.+ .+.....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~---t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAA---GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 8899998876543 4556667777889987766543 466777776643 56666654
No 239
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.85 E-value=3.1e+02 Score=27.35 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=64.4
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCch-HHHHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~-~~~~~A~~~~G~~~v~l~~ 127 (409)
|+.++++.- .+ +..+|+..+...+..+. .... .++.+++++...+|-...+ ....++++..|+..+...+
T Consensus 180 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 180 ETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDS-LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred ccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhh-cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 566666542 11 24678888765443332 1233 6788899988877654332 2344677778887776666
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHH
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVH 154 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (409)
....+.+.+.+++.++..++.......
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~ 284 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWI 284 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHH
Confidence 778889999999999999887765543
No 240
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=38.81 E-value=2.2e+02 Score=27.75 Aligned_cols=70 Identities=9% Similarity=-0.090 Sum_probs=46.0
Q ss_pred ceeeHHHHHHHHHHH--------------HHHhHhccCCCCCCEEEEEcCCCCchHHHHHH-HHHhCCeEccC-------
Q 015325 68 LRVSFSEFTRRTNSL--------------ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIISPA------- 125 (409)
Q Consensus 68 ~~~Ty~el~~~~~~l--------------a~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A-~~~~G~~~v~l------- 125 (409)
..-||.+|.+.+..+ |..+....++++||.| + +..++...-| +...|++++-+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccc
Confidence 445888888887544 3333322689999964 3 3444555444 78889887744
Q ss_pred -------CCCCCHHHHHHHHhhcC
Q 015325 126 -------NPVNTESEISRQIQLSN 142 (409)
Q Consensus 126 -------~~~~~~~~l~~~l~~~~ 142 (409)
.-+++.+.+...++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33578899999887643
No 241
>PLN00011 cysteine synthase
Probab=38.72 E-value=2.2e+02 Score=26.24 Aligned_cols=91 Identities=10% Similarity=-0.060 Sum_probs=58.0
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCC-CEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKN-DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g-~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+..-|+++=. .-..+...+.+ -.+.+| +.|+ ....+-.-..+.+++...|..+..+=|.........
T Consensus 33 ~i~~K~E~~nPtGS~K~R~-a~~~l~~a~~~-g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 109 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKDRI-AYSMIKDAEDK-GLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRI 109 (323)
T ss_pred eEEEEecccCCccccchHH-HHHHHHHHHHc-CCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHH
Confidence 5666666444445555421 12223343443 236677 5554 456677777788899999986665555545567788
Q ss_pred HHhhcCCeEEEEcCc
Q 015325 137 QIQLSNPVIAFATSS 151 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (409)
.++..++++++++..
T Consensus 110 ~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 110 ILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCEEEEECCC
Confidence 899999999998853
No 242
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=38.47 E-value=2.3e+02 Score=27.37 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=17.9
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEcc
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISP 124 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~ 124 (409)
.|.+|+|.......+-.+-+- ..+|..++.
T Consensus 302 ~gkrv~i~g~~~~~~~la~~L-~elGm~v~~ 331 (435)
T cd01974 302 HGKKFALYGDPDFLIGLTSFL-LELGMEPVH 331 (435)
T ss_pred CCCEEEEEcChHHHHHHHHHH-HHCCCEEEE
Confidence 478898887654433333333 378876644
No 243
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=38.27 E-value=1.7e+02 Score=28.69 Aligned_cols=84 Identities=11% Similarity=0.007 Sum_probs=62.0
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+..+++++....|-... .+...++++..|+..+.++ ....+.+...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 356777765555554443 157888999888887543 2367889999999988875 467899999999999999998
Q ss_pred chHHHHHH
Q 015325 288 TPPIVVAM 295 (409)
Q Consensus 288 ~p~~l~~l 295 (409)
.....+.+
T Consensus 90 ~~~~~~~~ 97 (509)
T PRK12406 90 HADLLHGL 97 (509)
T ss_pred ccchhhhh
Confidence 77666544
No 244
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=37.80 E-value=2.9e+02 Score=27.39 Aligned_cols=93 Identities=14% Similarity=0.074 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~ 267 (409)
.++.++.+...-+. .+|++.+...+..+...+. +..++|++....+-..-+ +..+++++..|+..+.+..
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCc
Confidence 45666665543322 7899988877777666552 356889988888876443 3578889999999998865
Q ss_pred -CCHHHHHHHHHHhcceeEeechH
Q 015325 268 -FDLKMMLKAVEEFRVTHAAVTPP 290 (409)
Q Consensus 268 -~~~~~~~~~i~~~~~t~l~~~p~ 290 (409)
..+..+...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 47889999999999999988876
No 245
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=37.72 E-value=1.5e+02 Score=27.78 Aligned_cols=65 Identities=9% Similarity=0.052 Sum_probs=42.1
Q ss_pred HHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC-----CCCHHHHHHHHhh---cCCeEEEE
Q 015325 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQL---SNPVIAFA 148 (409)
Q Consensus 80 ~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii~ 148 (409)
..+...++. +++++||.|++-.+. +....-++...|+.++.++. ..+.+.+...+++ -++++|+.
T Consensus 55 ~al~~~l~a-l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLA-LGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHH-cCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 334445555 678899987776543 45555667788987766554 2467888888763 35566663
No 246
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=37.71 E-value=2.9e+02 Score=27.65 Aligned_cols=128 Identities=9% Similarity=0.006 Sum_probs=78.2
Q ss_pred eeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcC--CCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 015325 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (409)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~--~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (409)
.+|..... +.+..+-..+|+++.|+|-+.+| ++...++-+-+|+..|+.+| |....++...-.-..+.++.++
T Consensus 261 vith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 46655444 44553333389999999999887 45666777889999998755 6778889888888889998877
Q ss_pred EEcCchHHHHh-------hcC--CeEEEe---CCCcchhhhcccCCcccccccccCCCCEEEEEcCC
Q 015325 147 FATSSVVHKLA-------KLK--HRTILI---DSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSS 201 (409)
Q Consensus 147 i~~~~~~~~~~-------~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 201 (409)
-.-.+...-+. +.. .+...- ....|.++........-.+.....+.+..++-|++
T Consensus 336 QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~ 402 (649)
T KOG1179|consen 336 QYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDG 402 (649)
T ss_pred ehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecC
Confidence 65444333332 112 222221 23457777766442212222233455566666644
No 247
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=37.69 E-value=1.1e+02 Score=27.72 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=50.9
Q ss_pred CCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccC-CCCCCHHHHHHHHhhcCCeEEEEcCchH
Q 015325 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA-NPVNTESEISRQIQLSNPVIAFATSSVV 153 (409)
Q Consensus 91 gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (409)
.+.+||.|+=-..|+.---+.+.-|-..|.-.+-+ ...-..+++...|+..+++.+|++++..
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 57889988888888888888888888888755544 3355789999999999999999988654
No 248
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=37.68 E-value=22 Score=26.03 Aligned_cols=35 Identities=34% Similarity=0.492 Sum_probs=24.3
Q ss_pred CccccccCCceEEEecCCCCCCCCCC---CcceEEEec
Q 015325 362 GSTGRLSAGLEAKIVDPETGDSLPPG---KEGELSIRG 396 (409)
Q Consensus 362 ~s~G~p~~~~~v~i~d~~~g~~~~~g---~~Gei~v~g 396 (409)
-+.|+|++|+++++.|...|+++..| ..|...+..
T Consensus 22 L~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~ 59 (97)
T PF11974_consen 22 LSTGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDS 59 (97)
T ss_pred CCCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecC
Confidence 35699999999999984566666543 445555544
No 249
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=36.85 E-value=2.5e+02 Score=25.32 Aligned_cols=90 Identities=12% Similarity=-0.004 Sum_probs=58.4
Q ss_pred CCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccC-CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 57 DTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 57 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g-v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
.++.+..+..+..-||++--. ...+...+. .| +.+|+.|+. ...+-.-..+.++|...|..+..+-|........
T Consensus 23 ~~i~~K~E~~nptGS~K~R~a-~~~v~~a~~--~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~ 98 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRPA-LSMIVEAEK--RGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERK 98 (290)
T ss_pred CeEEEEEccCCCCccHHHHHH-HHHHHHHHH--cCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHH
Confidence 356666664455556654221 223334333 35 367776655 5566677777888889998666666655556677
Q ss_pred HHHhhcCCeEEEEcC
Q 015325 136 RQIQLSNPVIAFATS 150 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~ 150 (409)
..++..++++++++.
T Consensus 99 ~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 99 AAMRAYGAELILVTK 113 (290)
T ss_pred HHHHHcCCEEEEeCC
Confidence 789999999999875
No 250
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=36.78 E-value=2.6e+02 Score=27.05 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC----------------CHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----------------TESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~----------------~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
.|.+|+|......-+-.+-+ +..+|..++.+-... +..++...+++.+++++|..........
T Consensus 310 ~Gkrvai~~~~~~~~~l~~~-l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~i~~~~~dliig~s~~k~~A~ 388 (432)
T TIGR01285 310 GGKKVAIAAEPDLLAAWATF-FTSMGAQIVAAVTTTGSPLLQKLPVETVVIGDLEDLEDLACAAGADLLITNSHGRALAQ 388 (432)
T ss_pred CCCEEEEEcCHHHHHHHHHH-HHHCCCEEEEEEeCCCCHHHHhCCcCcEEeCCHHHHHHHHhhcCCCEEEECcchHHHHH
Confidence 47889999866544444444 568888765444321 3356677777777777777665544444
Q ss_pred hcCCeEEEeC
Q 015325 158 KLKHRTILID 167 (409)
Q Consensus 158 ~~~~~~~~~~ 167 (409)
+++.+.+..+
T Consensus 389 ~l~ip~ir~g 398 (432)
T TIGR01285 389 RLALPLVRAG 398 (432)
T ss_pred HcCCCEEEec
Confidence 5555555444
No 251
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=36.76 E-value=51 Score=27.11 Aligned_cols=78 Identities=5% Similarity=0.050 Sum_probs=42.4
Q ss_pred HhCCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCC-HHHHHHHHHhCCCCc
Q 015325 257 ALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG-KDTIMAFASKFPKVV 335 (409)
Q Consensus 257 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~-~~~~~~~~~~~~~~~ 335 (409)
+..+.++++++.....+.+.+ ..++..-...+.++..+++..... ..|..++||.+-. ....+.+++.+|+..
T Consensus 3 ~~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 3 LNSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HHhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 345566666654444444444 444434444455556665543322 2477777775432 344557777777777
Q ss_pred eeccc
Q 015325 336 LVQAY 340 (409)
Q Consensus 336 i~~~y 340 (409)
+.-.|
T Consensus 77 ivg~~ 81 (172)
T PF03808_consen 77 IVGYH 81 (172)
T ss_pred EEEec
Confidence 66443
No 252
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=36.67 E-value=1.6e+02 Score=21.04 Aligned_cols=67 Identities=10% Similarity=-0.014 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhHhccCCCCCCEEEEE-cCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCe
Q 015325 74 EFTRRTNSLASYLQNVTRLSKNDTAFVL-STNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPV 144 (409)
Q Consensus 74 el~~~~~~la~~L~~~~gv~~g~~V~i~-~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 144 (409)
+-++-+..++..+.. .. . -+.|.|. ..+-++.+.+.--+.+.++..++++..++ +.....|+..+++
T Consensus 7 dRyeTs~~va~~~~~-~~-~-~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~~~l~-~~~~~~l~~~~~~ 74 (92)
T PF04122_consen 7 DRYETSAKVAKKFYP-DN-K-SDKVYIASGDNFADALSASPLAAKNNAPILLVNNSLP-SSVKAFLKSLNIK 74 (92)
T ss_pred CHHHHHHHHHHHhcc-cC-C-CCEEEEEeCcchhhhhhhHHHHHhcCCeEEEECCCCC-HHHHHHHHHcCCC
Confidence 345666677777654 22 3 3444444 44434444443344445888888884445 6666666665443
No 253
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=36.26 E-value=3.8e+02 Score=25.58 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHhHhccC------------------------CCCCCEEEEEcCCCCchHHH----HH-----HHHHh
Q 015325 72 FSEFTRRTNSLASYLQNVTR------------------------LSKNDTAFVLSTNSIEIPIL----YF-----SLLSL 118 (409)
Q Consensus 72 y~el~~~~~~la~~L~~~~g------------------------v~~g~~V~i~~~~~~~~~~~----~~-----A~~~~ 118 (409)
..++.+.+...+..|.. +. +++||+|+.+-...--++.. -. .-..-
T Consensus 64 id~iE~la~~ra~~lF~-~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~ 142 (399)
T PF00464_consen 64 IDEIEELAIERAKELFG-AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF 142 (399)
T ss_dssp HHHHHHHHHHHHHHHHT--STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS
T ss_pred hhHHHHHHHHHHHHHhC-CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceE
Confidence 44566666666666665 44 46889888775443222211 11 22223
Q ss_pred CCeEccCCC---CCCHHHHHHHHhhcCCeEEEEcCchH------HHHhh---cCCeEEEeCCCcchhhhcccCCcccccc
Q 015325 119 GVIISPANP---VNTESEISRQIQLSNPVIAFATSSVV------HKLAK---LKHRTILIDSPEFDSMTMSWNSKHELDR 186 (409)
Q Consensus 119 G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (409)
-.+..++++ ..+-+++..++++.+|++|++..... ..+.+ ...-++..|...+.-++..+.-. .+
T Consensus 143 ~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~---~P 219 (399)
T PF00464_consen 143 ESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFP---NP 219 (399)
T ss_dssp EEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-----G
T ss_pred EEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheec---Cc
Confidence 345556663 56889999999999999999986422 11211 12245556666666666655421 11
Q ss_pred cccCCCCEEEEEcCCCCC--CCcchhhhcc
Q 015325 187 AKVCQSDVAAIMYSSGTT--GRVKGVMLTH 214 (409)
Q Consensus 187 ~~~~~~~~a~i~~TSGTT--G~pK~v~~s~ 214 (409)
...-| .+..|..-| |..+|++++.
T Consensus 220 --~~~AD--vvt~sThKtl~GPrggiI~~~ 245 (399)
T PF00464_consen 220 --FPYAD--VVTGSTHKTLRGPRGGIILTN 245 (399)
T ss_dssp --CCTSS--EEEEESSGGG-SSS-EEEEES
T ss_pred --cccce--EEEeeccccccccCceEEEEc
Confidence 12233 234333333 6667777777
No 254
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=36.16 E-value=2.6e+02 Score=23.52 Aligned_cols=87 Identities=15% Similarity=0.118 Sum_probs=50.7
Q ss_pred CEEEEeCc-hhhHHhHHH-HHHHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeEeechH------HHHHHHhCCCCCCCC
Q 015325 235 AVMLFTMP-YFHIYGLFF-CFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPP------IVVAMSKGGSTDGYD 305 (409)
Q Consensus 235 d~~l~~~p-~~~~~g~~~-~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~------~l~~l~~~~~~~~~~ 305 (409)
.+++...+ -.|..|... ....-..|..++.. ....++.+.+.+.++++.++.++-. .+..+.+...... .
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~ 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-L 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-C
Confidence 34444444 467777733 33334577777655 3567899999999999998876542 2222222221111 0
Q ss_pred CCCcceeeecCCCCCHHH
Q 015325 306 LSSLETVACGAAPLGKDT 323 (409)
Q Consensus 306 l~~Lr~v~~~G~~~~~~~ 323 (409)
...+ .+++||.+++.+.
T Consensus 163 ~~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 163 RDKV-KVMVGGAPVNQEF 179 (201)
T ss_pred CcCC-eEEEECCcCCHHH
Confidence 1122 3777888888764
No 255
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.07 E-value=4.1e+02 Score=26.92 Aligned_cols=83 Identities=14% Similarity=0.026 Sum_probs=58.4
Q ss_pred hhccHHHHHHHHHhhccCC-CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEe-cCCC---HHHHHHHHHHhcceeE
Q 015325 211 MLTHRNLTAAVASSFASSP-KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFD---LKMMLKAVEEFRVTHA 285 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~---~~~~~~~i~~~~~t~l 285 (409)
.+|.+.+...+..+...+. ...++|++...++-..-+ +..+++++..|+..+.+ +... .+.+...+++.++..+
T Consensus 55 ~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~v 133 (631)
T PRK07769 55 DLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY-LIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAI 133 (631)
T ss_pred EeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH-HHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEE
Confidence 4788888766666554441 247788888888776432 35778999999988766 3222 4678889999999999
Q ss_pred eechHHHHH
Q 015325 286 AVTPPIVVA 294 (409)
Q Consensus 286 ~~~p~~l~~ 294 (409)
+........
T Consensus 134 i~~~~~~~~ 142 (631)
T PRK07769 134 LTTTDSAEG 142 (631)
T ss_pred EEChHHHHH
Confidence 887765443
No 256
>PRK05852 acyl-CoA synthetase; Validated
Probab=36.00 E-value=2.9e+02 Score=27.26 Aligned_cols=76 Identities=8% Similarity=-0.046 Sum_probs=57.1
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+. +..++|++....+-.-. .+..+++++..|+..+..+ ...+..+...+++.++..++.
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAE-FVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHH-HHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 4687877666555544431 57888998888776543 3367899999999988775 467889999999999998874
No 257
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=35.91 E-value=4.1e+02 Score=26.19 Aligned_cols=96 Identities=9% Similarity=0.018 Sum_probs=65.8
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchH---HHHHHHHHhCCeEccC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP---ILYFSLLSLGVIISPA 125 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~---~~~~A~~~~G~~~v~l 125 (409)
++.+|++-- .+ +..+|...+...+..... . .++.++|++...+|-...+- ...++++..|+..+..
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~-~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---h-cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 566776532 11 246899988876665433 3 67889999888877654332 2467888899887765
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCchHHHH
Q 015325 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (409)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (409)
. ..........+++.++.++.........+
T Consensus 257 ~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 286 (536)
T PRK10946 257 P-DPSATLCFPLIEKHQVNVTALVPPAVSLW 286 (536)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeChHHHHHH
Confidence 4 44667778889999999888877655444
No 258
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=35.90 E-value=57 Score=30.01 Aligned_cols=52 Identities=17% Similarity=0.244 Sum_probs=40.8
Q ss_pred eeeHHHHHHH------HHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCe
Q 015325 69 RVSFSEFTRR------TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (409)
Q Consensus 69 ~~Ty~el~~~------~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~ 121 (409)
.+.|.++... ...+...+.+ .|+.+++.|+++|..+.....+++++..+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~-~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQ-EGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4566665432 4667777887 89999999999999988888888888888864
No 259
>PRK07638 acyl-CoA synthetase; Validated
Probab=35.87 E-value=2.5e+02 Score=27.19 Aligned_cols=85 Identities=8% Similarity=0.130 Sum_probs=60.7
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc-hHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~-~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 146 (409)
..+|...+...+... ... .+++++|++....+-... ++...+..+..|+..+.. +.....++...+++.++.++
T Consensus 161 v~~s~~~~~~~~~~~---~~~-~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 161 FLRAQQSWLHSFDCN---VHD-FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEecHHHHHHHHHH---HHh-cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 457887776655433 334 678899998876654432 344566677889887765 45678889999999999999
Q ss_pred EEcCchHHHHh
Q 015325 147 FATSSVVHKLA 157 (409)
Q Consensus 147 i~~~~~~~~~~ 157 (409)
.........+.
T Consensus 236 ~~~P~~~~~l~ 246 (487)
T PRK07638 236 YTVPTMLESLY 246 (487)
T ss_pred EeCcHHHHHHH
Confidence 99887766554
No 260
>PRK06381 threonine synthase; Validated
Probab=35.75 E-value=3.3e+02 Score=24.92 Aligned_cols=89 Identities=6% Similarity=-0.070 Sum_probs=58.0
Q ss_pred CCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 57 DTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 57 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
.++.+-.+..+..=||++- .+..+.....+ .|. +.| +....+-.-+.+-++|...|..+..+-|.........
T Consensus 31 ~~i~~K~E~~nptGS~K~R--~a~~~l~~a~~-~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~ 103 (319)
T PRK06381 31 RKIYLKFEGANPTGTQKDR--IAEAHVRRAMR-LGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVK 103 (319)
T ss_pred ceEEEEecCCCCccCcHHH--HHHHHHHHHHH-cCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 3677777755666677762 22233333444 453 344 4455677777778889999986666555545556667
Q ss_pred HHhhcCCeEEEEcCch
Q 015325 137 QIQLSNPVIAFATSSV 152 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~~ 152 (409)
.++..++++++++.+.
T Consensus 104 ~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 104 EMEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHHcCCEEEEcCCCH
Confidence 8999999999998653
No 261
>PLN02479 acetate-CoA ligase
Probab=35.30 E-value=2.5e+02 Score=28.03 Aligned_cols=82 Identities=7% Similarity=-0.040 Sum_probs=62.1
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+. +..++|++....+-.-. .+...++++..|+..+.++ ....+.+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA-MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 4688887766666555542 67889998888886433 2357889999999988875 467899999999999999998
Q ss_pred chHHHH
Q 015325 288 TPPIVV 293 (409)
Q Consensus 288 ~p~~l~ 293 (409)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776543
No 262
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=35.23 E-value=2.6e+02 Score=27.25 Aligned_cols=84 Identities=14% Similarity=-0.047 Sum_probs=59.9
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|..++...+..+...+ .+...++++....+-... .+..+++++..|+..+..+ ..++..+...+++.+++.++.
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~ 108 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVD-FPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFV 108 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEE
Confidence 467777765554444333 156788888777665432 2367888999999988875 468899999999999999988
Q ss_pred chHHHHHH
Q 015325 288 TPPIVVAM 295 (409)
Q Consensus 288 ~p~~l~~l 295 (409)
.......+
T Consensus 109 ~~~~~~~~ 116 (508)
T TIGR02262 109 SGELLPVI 116 (508)
T ss_pred chhhHHHH
Confidence 77655443
No 263
>PRK13382 acyl-CoA synthetase; Provisional
Probab=35.22 E-value=2.5e+02 Score=27.72 Aligned_cols=82 Identities=13% Similarity=0.017 Sum_probs=60.6
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+..+++++....+-.-. .+..+++++..|+..+..+. .....+...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 477777766655555443 157788888888876543 34678999999999998864 57789999999999999887
Q ss_pred chHHHH
Q 015325 288 TPPIVV 293 (409)
Q Consensus 288 ~p~~l~ 293 (409)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 655443
No 264
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=35.21 E-value=66 Score=27.03 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=26.9
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEE
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV 100 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i 100 (409)
.-+||.++.+.+.++|..+.+ -|.+|.-.|++
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~-s~~~PDvIiai 36 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRA-SGFKPDVIVAI 36 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHH-cCCCCCEEEEE
Confidence 568999999999999999998 89887644444
No 265
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=35.11 E-value=1.1e+02 Score=25.50 Aligned_cols=47 Identities=9% Similarity=-0.098 Sum_probs=33.2
Q ss_pred CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHH
Q 015325 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (409)
Q Consensus 67 ~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~ 115 (409)
+.-+||.|+.+.+.++|..+.+.++. .+.+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~~--~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLAD--ENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcCC--CCeEEEEECCCcHHHHHHHHH
Confidence 46789999999999999999983232 233555566666666666653
No 266
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.76 E-value=1.9e+02 Score=26.62 Aligned_cols=66 Identities=8% Similarity=0.058 Sum_probs=48.7
Q ss_pred HHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcCchH
Q 015325 84 SYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV 153 (409)
Q Consensus 84 ~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (409)
+-|.. .|++||++|+|..--+.-++...+|-+. |.-...++... ...+..++..+++..+...+..
T Consensus 172 spLk~-~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 172 SPLKR-SGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred ehhHH-cCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCH
Confidence 34777 8999999999999888999999988765 55666666543 2344567888888877665333
No 267
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=34.64 E-value=2e+02 Score=27.26 Aligned_cols=60 Identities=7% Similarity=-0.057 Sum_probs=48.4
Q ss_pred CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEeechH
Q 015325 230 KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPP 290 (409)
Q Consensus 230 ~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~p~ 290 (409)
+...+|++....+-.-. ....+++++..|+..+..+. ...+.+...+++.++..+...+.
T Consensus 20 g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 20 GIRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CCCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 67889999988887643 34678999999999888864 67888999999999998876654
No 268
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=34.52 E-value=3.9e+02 Score=27.72 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=63.0
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCC--CchHHHHHHHHHhCCeEccCC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~--~~~~~~~~A~~~~G~~~v~l~ 126 (409)
++.+|++-- .+ +..+|+..+...+..+.. . .++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---I-ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 566766532 11 246899888766655443 3 6788999988887743 334455778888999888766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCchH
Q 015325 127 PVNTESEISRQIQLSNPVIAFATSSVV 153 (409)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (409)
.......+...+++.++..+.......
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~ 466 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFL 466 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHH
Confidence 544556667778888888877665443
No 269
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=34.24 E-value=2.8e+02 Score=30.50 Aligned_cols=99 Identities=8% Similarity=-0.048 Sum_probs=71.7
Q ss_pred cCCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCC-CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-
Q 015325 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (409)
Q Consensus 189 ~~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 266 (409)
..++.++.+.. .| -.+|.+.+...+..+...+. ...++|++....|-...+ ....++++..|+..+..+
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAG-ALANLALLLAGKVPVNLNY 697 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHH-HHHHHHHHHcCCEEEEeCC
Confidence 35677776532 12 14788888776666555442 247788888888876443 357899999999988775
Q ss_pred CCCHHHHHHHHHHhcceeEeechHHHHHHH
Q 015325 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVAMS 296 (409)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~ 296 (409)
...++.+...+++.+++.+...+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 467899999999999999999887776664
No 270
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=33.64 E-value=1e+02 Score=21.16 Aligned_cols=51 Identities=16% Similarity=0.274 Sum_probs=39.1
Q ss_pred HHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHHHHHHHhCCCCce
Q 015325 271 KMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (409)
Q Consensus 271 ~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~~~~~~~~~~~~i 336 (409)
..+++.+.+++++++.- ..+-.++-+.+.+.....+.+.+.++++||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 67888888999988764 2233567788888877778999999999987655
No 271
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=33.63 E-value=41 Score=22.84 Aligned_cols=22 Identities=14% Similarity=0.219 Sum_probs=14.0
Q ss_pred HHHHHHHHhHhccCCCCCCEEEE
Q 015325 78 RTNSLASYLQNVTRLSKNDTAFV 100 (409)
Q Consensus 78 ~~~~la~~L~~~~gv~~g~~V~i 100 (409)
+..-+-..|++ +|++.||.|.|
T Consensus 41 ~~~Gv~~~L~~-~G~~~GD~V~I 62 (69)
T PF09269_consen 41 KKMGVEKALRK-AGAKEGDTVRI 62 (69)
T ss_dssp HHTTHHHHHHT-TT--TT-EEEE
T ss_pred HHCCHHHHHHH-cCCCCCCEEEE
Confidence 34445667888 99999999876
No 272
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=33.55 E-value=2.3e+02 Score=22.87 Aligned_cols=86 Identities=14% Similarity=0.084 Sum_probs=59.0
Q ss_pred HHHHhCCeEEEecCCCHHHHHHHHHHh-cceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCC-------HHHHH
Q 015325 254 RAAALMETAVVMQRFDLKMMLKAVEEF-RVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG-------KDTIM 325 (409)
Q Consensus 254 ~~l~~G~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~-------~~~~~ 325 (409)
.-+-.|.++++-.+.....+.+.|.+. ++|++.-.......|.+. +..+.++.||..-+ +...+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~ 86 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALE 86 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHH
Confidence 334455555555666778888888887 889888888888888765 35788999995443 34556
Q ss_pred HHHHhCCCCceecccCcccccc
Q 015325 326 AFASKFPKVVLVQAYGLTESTA 347 (409)
Q Consensus 326 ~~~~~~~~~~i~~~yG~tE~~~ 347 (409)
.+++.....-++-.-|.++-.+
T Consensus 87 ~l~~~~~d~afi~~~gi~~~~G 108 (161)
T PF00455_consen 87 ALRQFRFDKAFIGADGISEEGG 108 (161)
T ss_pred HHHhhccceEEecccEecCCCc
Confidence 6666544556666667776433
No 273
>PRK07867 acyl-CoA synthetase; Validated
Probab=33.50 E-value=2.4e+02 Score=27.92 Aligned_cols=83 Identities=8% Similarity=-0.089 Sum_probs=60.9
Q ss_pred hhccHHHHHHHHHhhccCC---CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 211 MLTHRNLTAAVASSFASSP---KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
.+|...+...+..+...+. +..+.+++....+-.-- .+..+++++..|+.++.++ ...++.+...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPE-FSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 4788887776666655542 34566777777775432 2357889999999998775 46789999999999999999
Q ss_pred echHHHHH
Q 015325 287 VTPPIVVA 294 (409)
Q Consensus 287 ~~p~~l~~ 294 (409)
........
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 98766553
No 274
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=33.23 E-value=52 Score=22.34 Aligned_cols=19 Identities=16% Similarity=0.153 Sum_probs=15.3
Q ss_pred HHHHhHhccCCCCCCEEEEE
Q 015325 82 LASYLQNVTRLSKNDTAFVL 101 (409)
Q Consensus 82 la~~L~~~~gv~~g~~V~i~ 101 (409)
+-..|++ +|+++||.|.|.
T Consensus 45 v~~~L~~-~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRK-AGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHH-cCCCCCCEEEEc
Confidence 4556787 899999999875
No 275
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=32.96 E-value=2.7e+02 Score=26.89 Aligned_cols=94 Identities=13% Similarity=0.023 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~ 267 (409)
.|+.+|++.. + -.+|+..+...+..+...+ .+..+++++....|-...+ +..+++++..|+..+.++.
T Consensus 15 ~p~~~a~~~~--~-------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE--E-------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC--C-------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCc
Confidence 4566775532 1 2478887766665554433 1577889888888876543 4678999999999998864
Q ss_pred -CCHHHHHHHHHHhcceeEeechHHHH
Q 015325 268 -FDLKMMLKAVEEFRVTHAAVTPPIVV 293 (409)
Q Consensus 268 -~~~~~~~~~i~~~~~t~l~~~p~~l~ 293 (409)
..++.+...+++.++..++.......
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 111 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFEA 111 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhhH
Confidence 68899999999999988877654443
No 276
>PRK12582 acyl-CoA synthetase; Provisional
Probab=32.96 E-value=1.7e+02 Score=29.73 Aligned_cols=78 Identities=6% Similarity=-0.094 Sum_probs=57.0
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CC-----HHHHHHHHHHhcc
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FD-----LKMMLKAVEEFRV 282 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~-----~~~~~~~i~~~~~ 282 (409)
.+|...+...+..+...+ .+..++|++...++-.. -.+...++++..|+..+.++. +. .+.+...+++.++
T Consensus 80 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~ 158 (624)
T PRK12582 80 KVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKP 158 (624)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCC
Confidence 578888876666655443 16788999998888543 233678899999999888754 33 3788999999998
Q ss_pred eeEeech
Q 015325 283 THAAVTP 289 (409)
Q Consensus 283 t~l~~~p 289 (409)
..++...
T Consensus 159 ~~vi~~~ 165 (624)
T PRK12582 159 RVVFAQS 165 (624)
T ss_pred cEEEecC
Confidence 8887653
No 277
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=32.94 E-value=2.4e+02 Score=27.34 Aligned_cols=89 Identities=10% Similarity=-0.093 Sum_probs=58.9
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+..+..+..-|++.-- ....+...+. .|. .+|+.|+.. ..+-.-..+.++|.+.|..+..+=|.....+...
T Consensus 27 ~i~~K~E~~nptGS~K~R~-a~~~l~~a~~--~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 102 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDRI-ALRMIEDAEA--SGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVD 102 (454)
T ss_pred eEEEEEhhcCCCcchHHHH-HHHHHHHHHH--cCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHH
Confidence 5677666445555665532 2233444444 354 677765544 5677777788899999986666666555566777
Q ss_pred HHhhcCCeEEEEcC
Q 015325 137 QIQLSNPVIAFATS 150 (409)
Q Consensus 137 ~l~~~~~~~ii~~~ 150 (409)
.++..++++++++.
T Consensus 103 ~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 103 VLKALGAEIVRTPT 116 (454)
T ss_pred HHHHCCCEEEEcCC
Confidence 88999999999875
No 278
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=32.86 E-value=2.5e+02 Score=29.03 Aligned_cols=88 Identities=8% Similarity=-0.074 Sum_probs=65.4
Q ss_pred hhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeE
Q 015325 209 GVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHA 285 (409)
Q Consensus 209 ~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l 285 (409)
...+|.+.+...+..+...+ .+..++|++...++-..-+ +...++++..|+..+.. +...++.+...+++.++..+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 197 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECKAI 197 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEE
Confidence 45678888877666655444 1678899988888865332 25678889999887766 45788999999999999999
Q ss_pred eechHHHHHHHh
Q 015325 286 AVTPPIVVAMSK 297 (409)
Q Consensus 286 ~~~p~~l~~l~~ 297 (409)
+.....+..+..
T Consensus 198 v~~~~~~~~l~~ 209 (700)
T PTZ00216 198 VCNGKNVPNLLR 209 (700)
T ss_pred EECHHHHHHHHH
Confidence 988776665543
No 279
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=32.60 E-value=67 Score=28.85 Aligned_cols=53 Identities=19% Similarity=0.320 Sum_probs=42.3
Q ss_pred ceeeHHHHHH-----HHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCe
Q 015325 68 LRVSFSEFTR-----RTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (409)
Q Consensus 68 ~~~Ty~el~~-----~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~ 121 (409)
..+.|.++.. ....+...|.+ .|+.+++.|+++|.++...-.+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFG-RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3566777653 24567777777 89999999999999999998889999888874
No 280
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=32.56 E-value=3.2e+02 Score=23.39 Aligned_cols=91 Identities=12% Similarity=0.143 Sum_probs=0.0
Q ss_pred CCCCEEEEeCc-hhhHHhH-HHHHHHHHhCCeEEEe-cCCCHHHHHHHHHHhcceeEeech------HHHHHHHhCCCCC
Q 015325 232 VSPAVMLFTMP-YFHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTP------PIVVAMSKGGSTD 302 (409)
Q Consensus 232 ~~~d~~l~~~p-~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p------~~l~~l~~~~~~~ 302 (409)
....+++...+ -.|..|. .....--..|..++.. ....++.+.+.+.++++.++.++- ..+..+.+.....
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCCCCCcceeeecCCCCCHHHHHH
Q 015325 303 GYDLSSLETVACGAAPLGKDTIMA 326 (409)
Q Consensus 303 ~~~l~~Lr~v~~~G~~~~~~~~~~ 326 (409)
..+.+ +++||.+++++..+.
T Consensus 167 ~~~~~----i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 GIKIP----LLIGGAATSRKHTAV 186 (213)
T ss_pred CCCCe----EEEEChhcCHHHHhh
No 281
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.40 E-value=2.7e+02 Score=27.55 Aligned_cols=83 Identities=16% Similarity=-0.006 Sum_probs=60.5
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+..+++++....+-... .+..+++++..|+..+.++ ......+...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 578888876665544433 157778888877775443 2467899999999988875 457899999999999998888
Q ss_pred chHHHHH
Q 015325 288 TPPIVVA 294 (409)
Q Consensus 288 ~p~~l~~ 294 (409)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7665443
No 282
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=32.40 E-value=2.6e+02 Score=28.26 Aligned_cols=102 Identities=17% Similarity=0.002 Sum_probs=68.6
Q ss_pred CCCCEEEEEcC--CCCCCCcchhhhccHHHHHHHHHhhccCC-CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEe-
Q 015325 190 CQSDVAAIMYS--SGTTGRVKGVMLTHRNLTAAVASSFASSP-KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM- 265 (409)
Q Consensus 190 ~~~~~a~i~~T--SGTTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 265 (409)
.++.++++... .+++|. ...+|...+...+..+...+. ...++|++...++-... .+...++++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecC
Confidence 35667765421 112232 234788888766666555441 25788999888887643 235788999999998866
Q ss_pred cC-CC--HHHHHHHHHHhcceeEeechHHHHH
Q 015325 266 QR-FD--LKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 266 ~~-~~--~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
+. .. ++.+...+++.++..++.....+..
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 32 22 6789999999999999988766544
No 283
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=32.26 E-value=1.6e+02 Score=29.29 Aligned_cols=80 Identities=14% Similarity=-0.005 Sum_probs=60.7
Q ss_pred hhccHHHHHHHHHhhccCC---CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 211 MLTHRNLTAAVASSFASSP---KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
.+|...+...+..+...+. +..++|++....+-.-. ....+++++..|+..+... ....+.+...+++.++..+.
T Consensus 49 ~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i 127 (562)
T PRK12492 49 TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEE
Confidence 5788888777666665541 57888998888776543 3367889999999988775 46789999999999999888
Q ss_pred echHH
Q 015325 287 VTPPI 291 (409)
Q Consensus 287 ~~p~~ 291 (409)
..+..
T Consensus 128 ~~~~~ 132 (562)
T PRK12492 128 YLNMF 132 (562)
T ss_pred ecccc
Confidence 76543
No 284
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=31.95 E-value=2e+02 Score=25.81 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=36.5
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC----------CCCHHHHHHHHhh-cCCeEEEEc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP----------VNTESEISRQIQL-SNPVIAFAT 149 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~ii~~ 149 (409)
+++||+|.+.-+ .+...+-++...|+.++.+++ ..+.+++.+.+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~---~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRN---CHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCC---chHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 468998877643 334445567778987776654 3467888888865 467766554
No 285
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=31.92 E-value=4.7e+02 Score=25.64 Aligned_cols=96 Identities=10% Similarity=0.079 Sum_probs=65.1
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH---HHHHHHHhCCeEccC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI---LYFSLLSLGVIISPA 125 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~---~~~A~~~~G~~~v~l 125 (409)
++.+|++-- .+ +..+|...+...+.... .. .++.++|++...+|-...+-. ..++++..|+..+..
T Consensus 182 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 182 SDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EI-CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hh-cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 667777632 11 24688888776655433 34 678889998888775543322 357778888877654
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCchHHHH
Q 015325 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (409)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (409)
+ ......+...+++.++.++.........+
T Consensus 258 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 258 P-DPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 4 45677888899999999998887665443
No 286
>PRK09192 acyl-CoA synthetase; Validated
Probab=31.88 E-value=2.9e+02 Score=27.61 Aligned_cols=86 Identities=6% Similarity=-0.111 Sum_probs=61.4
Q ss_pred hhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CC-------HHHHHHHHHH
Q 015325 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FD-------LKMMLKAVEE 279 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~-------~~~~~~~i~~ 279 (409)
-.+|...+...+..+...+ .+..++|++....+..-. .+...++++..|+..+.++. +. .+.+...+++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGD-FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchh-HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 3467777765555544443 157889999998888543 33578899999999888842 11 5789999999
Q ss_pred hcceeEeechHHHHHHH
Q 015325 280 FRVTHAAVTPPIVVAMS 296 (409)
Q Consensus 280 ~~~t~l~~~p~~l~~l~ 296 (409)
.++..++........+.
T Consensus 127 ~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 127 AQPAAIITPDELLPWVN 143 (579)
T ss_pred cCCCEEEeChHHHHHHH
Confidence 99999988776554433
No 287
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=31.78 E-value=3.6e+02 Score=26.58 Aligned_cols=79 Identities=11% Similarity=-0.014 Sum_probs=57.4
Q ss_pred hhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
..+|...+...+..+...+ .+..+++++....+-..- .+...++++..|+.++..+ ...++.+...+++.+++.++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 130 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWE-FTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFV 130 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEE
Confidence 3578887766555554443 157788888888776433 3356789999999888775 46788999999999999888
Q ss_pred ech
Q 015325 287 VTP 289 (409)
Q Consensus 287 ~~p 289 (409)
..+
T Consensus 131 ~~~ 133 (538)
T TIGR03208 131 VPS 133 (538)
T ss_pred Ecc
Confidence 755
No 288
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=31.56 E-value=3.3e+02 Score=26.44 Aligned_cols=69 Identities=12% Similarity=0.018 Sum_probs=48.0
Q ss_pred ceeeHHHHHHHHHHH--------------H-HHhHhccCCCCCCEEEEEcCCCCchHHHHHH-HHHhCCeEccC--C---
Q 015325 68 LRVSFSEFTRRTNSL--------------A-SYLQNVTRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIISPA--N--- 126 (409)
Q Consensus 68 ~~~Ty~el~~~~~~l--------------a-~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A-~~~~G~~~v~l--~--- 126 (409)
..-||.+|.+.+..+ | +.+.. .++++||.| + +..++....+ +...|++++-+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~-l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~ 142 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQ-IAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAH 142 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHH-hCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeeccccc
Confidence 445899999886654 3 33555 799999976 3 3666666666 78888877777 2
Q ss_pred ---------CCCCHHHHHHHHhhcC
Q 015325 127 ---------PVNTESEISRQIQLSN 142 (409)
Q Consensus 127 ---------~~~~~~~l~~~l~~~~ 142 (409)
-+.+.+.+...++...
T Consensus 143 ~~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 143 DAQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred ccccCCCCCCCcCHHHHHHHhcccc
Confidence 2357888988887543
No 289
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=31.17 E-value=1.5e+02 Score=25.31 Aligned_cols=69 Identities=12% Similarity=0.099 Sum_probs=49.8
Q ss_pred CCcEEEeCCCCce-eeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHH
Q 015325 57 DTVALINSVTGLR-VSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESE 133 (409)
Q Consensus 57 ~~~a~~~~~~~~~-~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~ 133 (409)
.++++++. +.+ ..-.+.++.+.++++.|.+ .| .+.+.....=-+=++.=++...|...+-+.|.+..++
T Consensus 15 ~~i~V~~g--s~~~~~~~~~~~~a~~lg~~la~-~g-----~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~~~~~~ 84 (205)
T COG1611 15 RQIVVICG--SARGIEPEEYYELARELGRELAK-RG-----LLVITGGGPGVMEAVARGALEAGGLVVGILPGLLHEQ 84 (205)
T ss_pred ceEEEEEe--CCCCCCCHHHHHHHHHHHHHHHh-CC-----cEEEeCCchhhhhHHHHHHHHcCCeEEEecCCCchhh
Confidence 45667766 333 3333489999999999998 66 4555555555666777899999999999999766544
No 290
>PRK05939 hypothetical protein; Provisional
Probab=30.42 E-value=2.4e+02 Score=26.89 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (409)
+++||.|++.-..-......+.++.+.|+.+..++.. +.+++...++. +.++|++.
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 6788988775433223333334556778887777764 56677776643 56777664
No 291
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.38 E-value=2e+02 Score=27.78 Aligned_cols=57 Identities=25% Similarity=0.188 Sum_probs=36.5
Q ss_pred CCCCCEEEEEcCCCCchHHHH--HHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 92 LSKNDTAFVLSTNSIEIPILY--FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~--~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
+++||.|++.. +.......+ ..+.+.|+.+..++...+.+++...++. +.++|+...
T Consensus 97 l~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~ 155 (432)
T PRK06702 97 CSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAES 155 (432)
T ss_pred cCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEc
Confidence 68899876633 222212222 2357788888888877677788887765 567777643
No 292
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=30.36 E-value=1e+02 Score=26.03 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 75 FTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 75 l~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
..++.+-+++.+.+..++++||++.++... |--++|+ ++....+.-++++|...+
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEeh
Confidence 356777788887776899999987777654 4445554 556667778888877654
No 293
>PRK06060 acyl-CoA synthetase; Validated
Probab=30.22 E-value=2.7e+02 Score=28.75 Aligned_cols=82 Identities=11% Similarity=-0.010 Sum_probs=60.0
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|++.+...+..+...+ .+..+++++...++-+..+ +..+++++..|+..+.++ ......+...+++.++..++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 378888876665554443 1678899998888876543 357899999999888775 456788888889999988877
Q ss_pred chHHHH
Q 015325 288 TPPIVV 293 (409)
Q Consensus 288 ~p~~l~ 293 (409)
......
T Consensus 109 ~~~~~~ 114 (705)
T PRK06060 109 SDALRD 114 (705)
T ss_pred chHHhh
Confidence 654433
No 294
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=30.03 E-value=3.4e+02 Score=24.35 Aligned_cols=92 Identities=9% Similarity=-0.035 Sum_probs=57.4
Q ss_pred CCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHH
Q 015325 57 DTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (409)
Q Consensus 57 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~ 135 (409)
-++.+.++..+..-||+... ....+.. +.+ .|. ++|+.|+. ...+-.-..+.++|.+.|..+..+-|........
T Consensus 17 ~~i~~K~E~~~ptgS~K~R~-a~~~l~~-a~~-~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~ 92 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKDRI-ALYMIED-AEK-RGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKR 92 (291)
T ss_pred CeEEEEecccCCCCcchHHH-HHHHHHH-HHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHH
Confidence 35666666444444555432 2222333 343 353 35665544 5667777788889999998666665655556667
Q ss_pred HHHhhcCCeEEEEcCch
Q 015325 136 RQIQLSNPVIAFATSSV 152 (409)
Q Consensus 136 ~~l~~~~~~~ii~~~~~ 152 (409)
..++..++++++++...
T Consensus 93 ~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 93 KLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHHcCCEEEEeCCCC
Confidence 78899999999988653
No 295
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=29.54 E-value=2.1e+02 Score=28.28 Aligned_cols=82 Identities=5% Similarity=-0.169 Sum_probs=59.7
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+..++|++....+-..-+ ...+++++..|+..+..+ ...++.+...+++.++..++.
T Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~ 117 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVIT 117 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEE
Confidence 468888866665555543 1578888888887765433 246788889999988775 467899999999999999887
Q ss_pred chHHHH
Q 015325 288 TPPIVV 293 (409)
Q Consensus 288 ~p~~l~ 293 (409)
......
T Consensus 118 ~~~~~~ 123 (542)
T PRK06018 118 DLTFVP 123 (542)
T ss_pred ccccHH
Confidence 654433
No 296
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=29.49 E-value=4.7e+02 Score=24.84 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC
Q 015325 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP 127 (409)
Q Consensus 93 ~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~ 127 (409)
-.|.+|+|+......+..+ ..+..+|..++.+-.
T Consensus 284 l~gkrv~I~~~~~~~~~~~-~~l~elG~~v~~~~~ 317 (406)
T cd01967 284 LKGKKVIIYTGGARSWHVI-AALRELGMEVVAAGY 317 (406)
T ss_pred ccCCEEEEEccCcchHHHH-HHHHHcCCEEEEEEE
Confidence 4588999987766665555 677789988665543
No 297
>PRK14057 epimerase; Provisional
Probab=29.22 E-value=4.1e+02 Score=23.56 Aligned_cols=64 Identities=11% Similarity=-0.070 Sum_probs=47.9
Q ss_pred HHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCC----------eEccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 015325 82 LASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGV----------IISPANPVNTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 82 la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~----------~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (409)
....+.+ .| .|.|.+..+.+....-.+-.+-..|+ +-+.++|..+.+.+..++...+.-++.+-
T Consensus 90 ~i~~~~~-aG---ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV 163 (254)
T PRK14057 90 AAQACVK-AG---AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAV 163 (254)
T ss_pred HHHHHHH-hC---CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEE
Confidence 3344555 55 47899999877766666667777785 78899999999999999998876665553
No 298
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=29.02 E-value=2.6e+02 Score=26.81 Aligned_cols=64 Identities=13% Similarity=0.170 Sum_probs=49.6
Q ss_pred HHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccC--CCCCCHHHHHHHHhhcCCeEEE
Q 015325 83 ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA--NPVNTESEISRQIQLSNPVIAF 147 (409)
Q Consensus 83 a~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii 147 (409)
...+.+ -.--+|-+|++++.=..+..+.+..+..+||-.... ||....+++...|...+..+.-
T Consensus 21 ~~~~~~-~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 21 RERFSE-EKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred HHHHhc-cCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 334443 345568999999999999999999999999865544 7878888888888888877553
No 299
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=28.89 E-value=5.4e+02 Score=28.88 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=66.2
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHH-HHHHHHHhCCeEccCCC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI-LYFSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~-~~~A~~~~G~~~v~l~~ 127 (409)
|+.+|++-- .+ +..+|.+.+........ .. .++.++|++....+-+.+.-+ -+++.+..|+..+..++
T Consensus 597 ~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~-~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 597 PHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NH-YPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---Hh-cCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 667777632 11 24688887765544333 33 788999999988877655433 36778889998887765
Q ss_pred --CCCHHHHHHHHhhcCCeEEEEcCchHH
Q 015325 128 --VNTESEISRQIQLSNPVIAFATSSVVH 154 (409)
Q Consensus 128 --~~~~~~l~~~l~~~~~~~ii~~~~~~~ 154 (409)
..+.+.+...+++.++.++........
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~ 701 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLA 701 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHH
Confidence 346788899999999999887765543
No 300
>PLN02409 serine--glyoxylate aminotransaminase
Probab=28.73 E-value=2.4e+02 Score=26.78 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=13.0
Q ss_pred HHHHHHHHhCCCCceecccCc
Q 015325 322 DTIMAFASKFPKVVLVQAYGL 342 (409)
Q Consensus 322 ~~~~~~~~~~~~~~i~~~yG~ 342 (409)
++.+.+.+.+ ++.+..++|.
T Consensus 321 ~l~~~l~~~~-~i~i~~G~~~ 340 (401)
T PLN02409 321 EIVKNAWKKY-NLSLGLGLNK 340 (401)
T ss_pred HHHHHHHHhC-CEEEEcCCCc
Confidence 4555666666 7777777765
No 301
>PRK07476 eutB threonine dehydratase; Provisional
Probab=28.72 E-value=3.1e+02 Score=25.12 Aligned_cols=89 Identities=17% Similarity=0.073 Sum_probs=53.4
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+-.+..+..-||++-- ....+.. +.+ .|..+| | +....+-.-..+-+++.+.|..++.+-|..........
T Consensus 35 ~l~~K~E~~nptGS~K~R~-a~~~i~~-a~~-~~~~~g--v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~ 108 (322)
T PRK07476 35 PVWLKLETLQPTGSFKLRG-ATNALLS-LSA-QERARG--V-VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDA 108 (322)
T ss_pred eEEEEEccCCCCCCchHHH-HHHHHHh-hhh-hhhCCe--E-EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHH
Confidence 4666666444444554311 1122222 333 354433 3 33355666777788899999876665555555667778
Q ss_pred HhhcCCeEEEEcCch
Q 015325 138 IQLSNPVIAFATSSV 152 (409)
Q Consensus 138 l~~~~~~~ii~~~~~ 152 (409)
++..++++++++...
T Consensus 109 ~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 109 IRALGAEVRIVGRSQ 123 (322)
T ss_pred HHHcCCEEEEECCCH
Confidence 899999999998643
No 302
>PTZ00297 pantothenate kinase; Provisional
Probab=28.71 E-value=4.5e+02 Score=30.04 Aligned_cols=98 Identities=15% Similarity=-0.007 Sum_probs=70.8
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhcceeEeec
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVT 288 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~ 288 (409)
.+|.+.+...+..+...+ -++.++|++...++-..-. ....++++..|+..+.+. .+...+...+++.++++++..
T Consensus 457 ~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ew-via~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVfv~ 534 (1452)
T PTZ00297 457 WLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNI-VILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVFAD 534 (1452)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEEEc
Confidence 478888766665544443 1688999998888865332 246788899999888774 356789999999999999998
Q ss_pred hHHHHHHHhCCCCCCCCCCCcceeeecC
Q 015325 289 PPIVVAMSKGGSTDGYDLSSLETVACGA 316 (409)
Q Consensus 289 p~~l~~l~~~~~~~~~~l~~Lr~v~~~G 316 (409)
...+..+..... ..||.+++-.
T Consensus 535 ~~~l~kl~~i~~------~~Lr~IIv~d 556 (1452)
T PTZ00297 535 RNSVAAILTCRS------RKLETVVYTH 556 (1452)
T ss_pred hhHHHHHHhhcc------cCCcEEEEEC
Confidence 888887765321 2577777754
No 303
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=28.45 E-value=1.6e+02 Score=30.53 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=41.5
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC---------C-----HHHHHHHHhhc-CCe----EEEEcCc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN---------T-----ESEISRQIQLS-NPV----IAFATSS 151 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~ 151 (409)
+++||.| ++-+|+..++.. |+..+|+.++.+.|.. + .+.+++.+++. +++ ++|+.+.
T Consensus 232 ~~~Gd~V-LvdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT 307 (714)
T PRK15400 232 APAGSTV-LIDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST 307 (714)
T ss_pred cCCCCEE-EeecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC
Confidence 5789955 477788888665 9999999999998863 3 67788877654 233 6666553
No 304
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.35 E-value=2.2e+02 Score=28.26 Aligned_cols=82 Identities=5% Similarity=-0.098 Sum_probs=59.9
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+...+|++...++-..-+ +...++++..|+..+.++ .+..+.+...+++.+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 367777766665554443 1567888888888775443 357888999998888775 467889999999999999988
Q ss_pred chHHHH
Q 015325 288 TPPIVV 293 (409)
Q Consensus 288 ~p~~l~ 293 (409)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 765433
No 305
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=28.27 E-value=2.5e+02 Score=27.28 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=49.5
Q ss_pred CCHHHHHhhccCCCCCCC-CCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHH
Q 015325 38 ISAVDYVSSLRATLPWRD-DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~-p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~ 111 (409)
.++.+.+.+...++...+ -+..|+... .....+|+++.+.+..++..+.+ . +.++..+.|++.+...=+.-
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~-g~~~~~f~~iq~lA~~i~~~~~~-~-~~~~~Plivv~e~D~aKvLG 424 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALP-GKPNPSFAEIQELAEAIAEGMAE-L-INPDQPLIVVVEQDMAKVLG 424 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeC-CCCCCCHHHHHHHHHHHHHHHHh-h-ccCCCCEEEEECchHHHHHH
Confidence 466777777766543211 345566555 23579999999999999999998 4 57788888888876544443
No 306
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=28.17 E-value=1.9e+02 Score=21.72 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=29.4
Q ss_pred HHHHHhHhccCCCCCCEEEEEcCC-CCchHHHHHHHHHhCCe
Q 015325 81 SLASYLQNVTRLSKNDTAFVLSTN-SIEIPILYFSLLSLGVI 121 (409)
Q Consensus 81 ~la~~L~~~~gv~~g~~V~i~~~~-~~~~~~~~~A~~~~G~~ 121 (409)
.+.+.+.+ .|+.+++.|++++.. +.....+.+.+...|..
T Consensus 66 ~~~~~~~~-~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGS-LGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHH-cCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 34444566 788899999999988 46666667777788853
No 307
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=28.13 E-value=2.2e+02 Score=27.69 Aligned_cols=79 Identities=9% Similarity=-0.093 Sum_probs=58.1
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+. +...++++....+....+ ....++++..|+..+..+. ...+.+...+++.++..++.
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHM-LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHH-HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 4788888776666655441 466778887777765433 3578899999998887754 56788889999999998887
Q ss_pred chH
Q 015325 288 TPP 290 (409)
Q Consensus 288 ~p~ 290 (409)
...
T Consensus 104 ~~~ 106 (502)
T TIGR01734 104 TAE 106 (502)
T ss_pred ccc
Confidence 654
No 308
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.09 E-value=2.8e+02 Score=27.50 Aligned_cols=81 Identities=10% Similarity=0.019 Sum_probs=59.8
Q ss_pred hhccHHHHHHHHHhhccC---CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEe
Q 015325 211 MLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 286 (409)
.+|...+......+...+ .+...++++....+-... .+..+++++..|+..+.++ ...++.+...+++.+++.+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQ-YPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 468888766665555543 157788888888766432 2367789999999999875 46789999999999999998
Q ss_pred echHHH
Q 015325 287 VTPPIV 292 (409)
Q Consensus 287 ~~p~~l 292 (409)
..+...
T Consensus 127 ~~~~~~ 132 (560)
T PRK08974 127 IVSNFA 132 (560)
T ss_pred Eecccc
Confidence 766443
No 309
>PLN02550 threonine dehydratase
Probab=27.92 E-value=5.4e+02 Score=26.13 Aligned_cols=89 Identities=20% Similarity=0.122 Sum_probs=54.8
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+-.++.+..-||+. .-..+++.+ |.. ....+| +|. ...+-....+.++|.++|..+..+=|...+......
T Consensus 125 ~IylK~E~lqptGSFK~-RGA~n~I~~-L~~-e~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~ 198 (591)
T PLN02550 125 KVLLKREDLQPVFSFKL-RGAYNMMAK-LPK-EQLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQS 198 (591)
T ss_pred EEEEEEcCCCCCCcHHH-HHHHHHHHH-HHH-hcCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 45555564445557776 222233333 323 234555 333 455666667777899999866555555555666777
Q ss_pred HhhcCCeEEEEcCch
Q 015325 138 IQLSNPVIAFATSSV 152 (409)
Q Consensus 138 l~~~~~~~ii~~~~~ 152 (409)
++..+++++++....
T Consensus 199 ~r~~GAeVvl~g~~~ 213 (591)
T PLN02550 199 VERLGATVVLVGDSY 213 (591)
T ss_pred HHHcCCEEEEeCCCH
Confidence 899999999998653
No 310
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=27.90 E-value=1.1e+02 Score=23.93 Aligned_cols=55 Identities=16% Similarity=0.086 Sum_probs=33.2
Q ss_pred eHHHHHHHHHHHHHHhHhccCCCCCCEEEEEc--CCCCchHHHHHHHHHhCCeEccC
Q 015325 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLS--TNSIEIPILYFSLLSLGVIISPA 125 (409)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~--~~~~~~~~~~~A~~~~G~~~v~l 125 (409)
....-.+.-.-++..+.+...+++||.+.++. .+++..+-+...+.+.|+..+.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 34444444456666666635689999988874 55677777788888888876643
No 311
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=27.90 E-value=2.9e+02 Score=26.49 Aligned_cols=78 Identities=12% Similarity=0.047 Sum_probs=58.5
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|++.+...+..+...+ .+..+++++....+-... .+..+++++..|+..+..+ ...++.+...+++.++..+..
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPE-TLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 478888877776665544 157788888888776543 3357899999999999885 467788888999999988876
Q ss_pred ch
Q 015325 288 TP 289 (409)
Q Consensus 288 ~p 289 (409)
..
T Consensus 107 ~~ 108 (458)
T PRK09029 107 LE 108 (458)
T ss_pred cC
Confidence 54
No 312
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=27.82 E-value=3e+02 Score=21.59 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 110 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
.....+-..|.-++.+..+.+.+++...+.+.+|++|..+.
T Consensus 22 iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 22 ILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 33446667899999999999999999999999999998875
No 313
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=27.78 E-value=4.6e+02 Score=25.22 Aligned_cols=31 Identities=13% Similarity=0.181 Sum_probs=19.7
Q ss_pred CCEEEEEcCCCCchHHHHHHHHHhCCeEccC
Q 015325 95 NDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (409)
Q Consensus 95 g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l 125 (409)
|.+|+|+++....+-.+-+..-..|..++.+
T Consensus 293 ~k~vai~~~~~~~~~l~~~L~~elGm~~~~~ 323 (427)
T cd01971 293 PRRFAVIADSTYALGLARFLVNELGWVPAKQ 323 (427)
T ss_pred CceEEEECChHHHHHHHHHHHHhcCCceEEE
Confidence 6789999866544444444444689866544
No 314
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=27.46 E-value=2.2e+02 Score=26.87 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhh---cCCeEEEE
Q 015325 95 NDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQL---SNPVIAFA 148 (409)
Q Consensus 95 g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~---~~~~~ii~ 148 (409)
+-+|+.+++.+.+. +...|..+..++...+.+.+...+.. .+.++++.
T Consensus 98 ~~~i~aVG~~Ta~a------L~~~G~~~~~~p~~~~~e~L~~~l~~~~~~g~~vli~ 148 (381)
T PRK07239 98 SARLLARGPKATGA------IRAAGLREEWSPASESSAEVLEYLLEEGVAGKRIAVQ 148 (381)
T ss_pred CCeEEEECccHHHH------HHHcCCCCccCCCCCccHHHHHHHhcCCCCCCEEEEE
Confidence 45677777765443 34678776667677777777776654 23455553
No 315
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=27.36 E-value=4.6e+02 Score=26.07 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCC----HHHHHHHHhh
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNT----ESEISRQIQL 140 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~----~~~l~~~l~~ 140 (409)
.|.+|+|++.....+-.+-|- ..+|+.++.+-.... .+++..++..
T Consensus 362 ~GKrvaI~gdpd~~~~l~~fL-~ElGmepv~v~~~~~~~~~~~~l~~ll~~ 411 (515)
T TIGR01286 362 HGKRFAIYGDPDFVMGLVRFV-LELGCEPVHILCTNGTKRWKAEMKALLAA 411 (515)
T ss_pred cCceEEEECCHHHHHHHHHHH-HHCCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 478999998655444444444 479987665533322 3445555544
No 316
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=27.22 E-value=3.1e+02 Score=24.29 Aligned_cols=72 Identities=18% Similarity=0.074 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCCchHHHHHHHHHhCCe---EccCCCCCCHHHHHHHHhhcCCeEEEEcCc--------hHHHHhhcCCeE
Q 015325 95 NDTAFVLSTNSIEIPILYFSLLSLGVI---ISPANPVNTESEISRQIQLSNPVIAFATSS--------VVHKLAKLKHRT 163 (409)
Q Consensus 95 g~~V~i~~~~~~~~~~~~~A~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~--------~~~~~~~~~~~~ 163 (409)
+.++.+..-...+.+. .|..+|.. .+.+.+..+.+.=..++++.+++++++-.. ......++++++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~v 226 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINV 226 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcE
Confidence 4555554434444444 67777763 667777778888889999999999998653 223334678888
Q ss_pred EEeCCC
Q 015325 164 ILIDSP 169 (409)
Q Consensus 164 ~~~~~~ 169 (409)
+.+.-+
T Consensus 227 ivI~RP 232 (256)
T TIGR00715 227 IRIARP 232 (256)
T ss_pred EEEeCC
Confidence 887754
No 317
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
Probab=27.22 E-value=7.1e+02 Score=26.66 Aligned_cols=83 Identities=11% Similarity=-0.082 Sum_probs=51.6
Q ss_pred CCCCEEEEeCchhhHHhH-HHHHHHHHh----CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHH-HHhCCCCCCCC
Q 015325 232 VSPAVMLFTMPYFHIYGL-FFCFRAAAL----METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVA-MSKGGSTDGYD 305 (409)
Q Consensus 232 ~~~d~~l~~~p~~~~~g~-~~~~~~l~~----G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~-l~~~~~~~~~~ 305 (409)
.+..+.+...|+--..-- ..-+.-+.. +......++-.+..-...+.+.++.+++..|.+++. +++.-..-.+.
T Consensus 113 ~~~a~AL~lYPtnALa~DQ~~rl~~~~~~~~~~v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~ 192 (851)
T COG1205 113 DPSARALLLYPTNALANDQAERLRELISDLPGKVTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWL 192 (851)
T ss_pred CcCccEEEEechhhhHhhHHHHHHHHHHhCCCcceeeeecCCCChHHHHHHHhCCCCEEEeCHHHHHHHhccCcchHHHH
Confidence 344477777776433222 222222222 334555555555666668999999999999999999 44443333444
Q ss_pred CCCcceeee
Q 015325 306 LSSLETVAC 314 (409)
Q Consensus 306 l~~Lr~v~~ 314 (409)
++.||++++
T Consensus 193 ~~~Lk~lVv 201 (851)
T COG1205 193 LRNLKYLVV 201 (851)
T ss_pred HhcCcEEEE
Confidence 677999887
No 318
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=27.19 E-value=4.1e+02 Score=25.88 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=39.5
Q ss_pred CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC---CCCHHHHHHHHhhcCCeEEEEcCchH
Q 015325 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVV 153 (409)
Q Consensus 93 ~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~ 153 (409)
.+||+|++=-| -+.-+.-+.-..|+-+++++. ....+.+.+.+++.+++++++.+.+.
T Consensus 177 ~pGd~v~vE~P---tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 177 DPGDTVLVEDP---TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCEEEEcCC---CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 47887776443 344444455555655555544 57899999999998999999876543
No 319
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=27.03 E-value=4.2e+02 Score=22.95 Aligned_cols=91 Identities=12% Similarity=0.022 Sum_probs=56.3
Q ss_pred CCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 57 DTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 57 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
.++.+..++.+..-|+++.... .+...+.+ .|..+++.|+.. ..+-....+.++|...|..++.+-|........+
T Consensus 15 ~~l~~K~e~~~ptgS~K~R~a~--~~l~~a~~-~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~ 90 (244)
T cd00640 15 ANIYLKLEFLNPTGSFKDRGAL--NLILLAEE-EGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVA 90 (244)
T ss_pred CEEEEEecccCCcCCcHHHHHH--HHHHHHHH-cCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 4566666644445566543222 22223333 343245555444 3456667777788889986666666556677778
Q ss_pred HHhhcCCeEEEEcCc
Q 015325 137 QIQLSNPVIAFATSS 151 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (409)
.++..+++++.++..
T Consensus 91 ~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 91 QMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHCCCEEEEECCC
Confidence 889999999999876
No 320
>PLN02356 phosphateglycerate kinase
Probab=26.82 E-value=3.3e+02 Score=26.25 Aligned_cols=88 Identities=8% Similarity=-0.068 Sum_probs=56.4
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCC-CCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv-~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
++.+-.+.-+..=||++ +-+..+...+.+ .|. ++|..|+ ....+-.-+.+.++|...|..++.+=|.....+...
T Consensus 69 ~v~~KlE~~nPtGS~Kd--R~A~~~i~~a~~-~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~ 144 (423)
T PLN02356 69 EILGKCEFLNPGGSVKD--RVAVKIIEEALE-SGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQ 144 (423)
T ss_pred EEEEEeccCCCCCCHHH--HHHHHHHHHHHh-CCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHH
Confidence 46666664455566664 222222223333 344 3666554 334455577788889999987766666666667778
Q ss_pred HHhhcCCeEEEEc
Q 015325 137 QIQLSNPVIAFAT 149 (409)
Q Consensus 137 ~l~~~~~~~ii~~ 149 (409)
.++..++++++++
T Consensus 145 ~ir~~GAeVi~v~ 157 (423)
T PLN02356 145 ILEALGATVERVR 157 (423)
T ss_pred HHHHcCCEEEEEC
Confidence 9999999999985
No 321
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=26.61 E-value=2.4e+02 Score=28.49 Aligned_cols=95 Identities=7% Similarity=-0.079 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~ 267 (409)
.++.++++... ..|. ...+|.+.+...+..+...+ .+..++|++...++-..-+ +...++++..|+.++.++.
T Consensus 52 ~p~~~a~~~~~--~~~~--~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~ 126 (614)
T PRK08180 52 APDRVFLAERG--ADGG--WRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH-ALLALAAMYAGVPYAPVSP 126 (614)
T ss_pred CCCCceeeecc--CCCc--eeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeecc
Confidence 45667665431 1121 23578888877666665544 1578889988888776433 2578899999999998864
Q ss_pred -CC-----HHHHHHHHHHhcceeEeech
Q 015325 268 -FD-----LKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 268 -~~-----~~~~~~~i~~~~~t~l~~~p 289 (409)
.. +..+...+++.++..++...
T Consensus 127 ~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 127 AYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 33 68889999999999888754
No 322
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=26.56 E-value=4.6e+02 Score=25.18 Aligned_cols=48 Identities=15% Similarity=0.027 Sum_probs=33.6
Q ss_pred CCCEEEEeCchhhHHhH--HHHHHHHHhCCeEEEecCC----CHHHHHHHHHHh
Q 015325 233 SPAVMLFTMPYFHIYGL--FFCFRAAALMETAVVMQRF----DLKMMLKAVEEF 280 (409)
Q Consensus 233 ~~d~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~ 280 (409)
+--+++...|+.+...+ ..+..+|.+|.++++.+.. ....+.+++.+.
T Consensus 96 P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~a 149 (429)
T cd07100 96 PLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREA 149 (429)
T ss_pred eeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 34567777888776644 6788999999999988642 334566666663
No 323
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=26.52 E-value=3.3e+02 Score=25.68 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=37.3
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC--C----CCHHHHHHHHhhc------CCeEEEEc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP--V----NTESEISRQIQLS------NPVIAFAT 149 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~--~----~~~~~l~~~l~~~------~~~~ii~~ 149 (409)
+++||.|.+. ...+...+.++...|+.++.++. + .+.+.+...++.. ++++|+..
T Consensus 99 ~~~gd~Vlv~---~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLD---GLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEEC---CCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 4788987764 33445555677888988777765 2 5678888887653 57777754
No 324
>cd04863 MtLigD_Pol_like MtLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Mycobacterium tuberculosis (Mt)LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. MtLigD is monomeric and contains an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The MtLigD Pol domain is stimulated by manganese, is error-prone, and prefers adding rNTPs to dNTPs in vitro. The MtLigD Pol domain has been shown to prefer DNA gapped substrates
Probab=26.09 E-value=2.9e+02 Score=24.03 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=45.2
Q ss_pred CCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHH
Q 015325 54 RDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESE 133 (409)
Q Consensus 54 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~ 133 (409)
++||+..+- =+-+...+|.++.+.+..+-..|.+ +|+. ..+-.-+..+.+ ++|||.+..+-++
T Consensus 100 e~PD~~vfD-LDP~~~~~f~~v~~~A~~~r~~L~~-lgL~--s~~KTSG~kGlH-------------V~vPl~~~~~~~~ 162 (231)
T cd04863 100 GPPDRLVFD-LDPGEPAGLVECARVALWLRDRLAA-LGLA--SFPKTSGSKGLH-------------LYVPLDGPVSSDQ 162 (231)
T ss_pred CCCCEEEEE-CCCCCCCCHHHHHHHHHHHHHHHHH-cCCc--cceECCCCCeEE-------------EEEEcCCCCCHHH
Confidence 447765553 2225678999999999999999998 9985 223333333332 6788888887666
Q ss_pred HHHHH
Q 015325 134 ISRQI 138 (409)
Q Consensus 134 l~~~l 138 (409)
+..+.
T Consensus 163 vr~fa 167 (231)
T cd04863 163 TKEFA 167 (231)
T ss_pred HHHHH
Confidence 55443
No 325
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=25.93 E-value=2.5e+02 Score=25.92 Aligned_cols=11 Identities=9% Similarity=0.060 Sum_probs=4.7
Q ss_pred hhhhccHHHHH
Q 015325 209 GVMLTHRNLTA 219 (409)
Q Consensus 209 ~v~~s~~~l~~ 219 (409)
|+.+..+.++.
T Consensus 195 G~l~~~~~~~~ 205 (356)
T cd06451 195 GPIAFSERALE 205 (356)
T ss_pred ceeEECHHHHH
Confidence 34444444443
No 326
>PRK10595 SOS cell division inhibitor; Provisional
Probab=25.88 E-value=2.1e+02 Score=23.42 Aligned_cols=65 Identities=18% Similarity=0.085 Sum_probs=38.2
Q ss_pred HHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCe-EccC-CC-CCCHHHHHH---HHhhcCCeEEEE
Q 015325 83 ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI-ISPA-NP-VNTESEISR---QIQLSNPVIAFA 148 (409)
Q Consensus 83 a~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~-~v~l-~~-~~~~~~l~~---~l~~~~~~~ii~ 148 (409)
+.+|.+ .|+..+..+.|...+..+.+-++-=+++.|.. .|.. -+ ..+.+++++ ..+..++-.++.
T Consensus 70 ~~~L~~-~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQA-SGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHH-cCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 566777 89887776666666667777777777777752 2222 13 555555443 334444444443
No 327
>PRK09224 threonine dehydratase; Reviewed
Probab=25.70 E-value=4e+02 Score=26.35 Aligned_cols=90 Identities=16% Similarity=0.090 Sum_probs=55.8
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+..++.+..-||+. .-..+.+++ |.+..+ .+| .|....+-....+.+++...|..++.+=|...+......
T Consensus 36 ~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~-~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~ 109 (504)
T PRK09224 36 QVLLKREDLQPVFSFKL-RGAYNKMAQ-LTEEQL-ARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDA 109 (504)
T ss_pred EEEEEecCCCCCCCChH-HHHHHHHHh-hhHHhc-CCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 56676665555667776 222333333 332122 222 344456667777788999999866655555555566678
Q ss_pred HhhcCCeEEEEcCchH
Q 015325 138 IQLSNPVIAFATSSVV 153 (409)
Q Consensus 138 l~~~~~~~ii~~~~~~ 153 (409)
++..+++++++..+..
T Consensus 110 ~r~~GA~Vi~~g~~~~ 125 (504)
T PRK09224 110 VRAFGGEVVLHGDSFD 125 (504)
T ss_pred HHhCCCEEEEECCCHH
Confidence 8999999999976543
No 328
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=24.94 E-value=3e+02 Score=20.60 Aligned_cols=37 Identities=11% Similarity=-0.022 Sum_probs=31.4
Q ss_pred HHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 114 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
.+...|.-++.+.++.+.+++...+.+.++++|..+.
T Consensus 22 ~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 22 ALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 3445788888899999999999999999999988764
No 329
>PRK05638 threonine synthase; Validated
Probab=24.88 E-value=6e+02 Score=24.57 Aligned_cols=91 Identities=13% Similarity=-0.023 Sum_probs=55.5
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+-++..+.+-||++-.. ...+...+ + .| .+.|+. ...+-.-..+..++..+|..+..+-|..........
T Consensus 81 ~l~~K~E~~nPtGSfKdR~a-~~~i~~a~-~-~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~ 153 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRLA-TVAVSYGL-P-YA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQ 153 (442)
T ss_pred eEEEEeCCCCCCCChHHHHH-HHHHHHHH-H-cC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHH
Confidence 57777776567788887322 22233333 3 34 234444 445566666667777888755444444344555677
Q ss_pred HhhcCCeEEEEcCchHHH
Q 015325 138 IQLSNPVIAFATSSVVHK 155 (409)
Q Consensus 138 l~~~~~~~ii~~~~~~~~ 155 (409)
++..+++++.++.+....
T Consensus 154 ~~~~GA~vi~v~~~~~~~ 171 (442)
T PRK05638 154 MIAFGAKIIRYGESVDEA 171 (442)
T ss_pred HHhcCcEEEEECCCHHHH
Confidence 899999999998654433
No 330
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=24.84 E-value=2.1e+02 Score=23.09 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=26.3
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCC
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI 106 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~ 106 (409)
.-+||.|+.+.++++|..+.+ .| .-+.|+-++..+.
T Consensus 8 ~~is~~~i~~~i~~la~~I~~-~~--~~d~vvgv~~GG~ 43 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLP-AG--QWKGIIAVTRGGL 43 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHh-hC--CCCEEEEEecCCe
Confidence 358999999999999999998 54 2355555554443
No 331
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=24.82 E-value=5.1e+02 Score=24.40 Aligned_cols=89 Identities=11% Similarity=0.062 Sum_probs=56.5
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+-.+..+..-||++- -..+.+.. +.+ .|..+ -.+....+-.-..+.++|...|..+..+=|...+......
T Consensus 16 ~i~~K~E~~~ptgS~K~R-~a~~~i~~-~~~-~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 89 (380)
T TIGR01127 16 EVYLKLENLQKTGSFKIR-GALNKIAN-LSE-DQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKA 89 (380)
T ss_pred eEEEEecCCCCCCCcHHH-HHHHHHHh-cch-hccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHH
Confidence 566666644556677652 22223333 333 34322 2444455667777788899999866666666666677788
Q ss_pred HhhcCCeEEEEcCch
Q 015325 138 IQLSNPVIAFATSSV 152 (409)
Q Consensus 138 l~~~~~~~ii~~~~~ 152 (409)
++..+++++++....
T Consensus 90 ~~~~GA~V~~~~~~~ 104 (380)
T TIGR01127 90 TKSYGAEVILHGDDY 104 (380)
T ss_pred HHHCCCEEEEECCCH
Confidence 999999999987643
No 332
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=24.70 E-value=81 Score=27.10 Aligned_cols=30 Identities=10% Similarity=0.059 Sum_probs=23.2
Q ss_pred HHHHHhCCeEccCCCCCCHHHHHHHHhhcC
Q 015325 113 FSLLSLGVIISPANPVNTESEISRQIQLSN 142 (409)
Q Consensus 113 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 142 (409)
=++..+|+.+++|++..+.+++..+++.++
T Consensus 31 ~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 31 KAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 378899999999999999999999999876
No 333
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=24.69 E-value=2.2e+02 Score=19.81 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=29.3
Q ss_pred HHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCe
Q 015325 81 SLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (409)
Q Consensus 81 ~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~ 121 (409)
.+...+.. .++.+++.|++++.++.....+...+...|..
T Consensus 43 ~~~~~~~~-~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKR-LGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHH-cCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 44455555 68888999999998777777777777777754
No 334
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=24.52 E-value=3e+02 Score=27.29 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=21.0
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP 127 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~ 127 (409)
.|.+|+|+......+-++-+..-.+|..++....
T Consensus 294 ~Gkrv~I~gd~~~a~~l~~~L~~ElG~~vv~~gt 327 (511)
T TIGR01278 294 TGKRAFVFGDATHAVGMTKILARELGIHIVGAGT 327 (511)
T ss_pred cCCeEEEEcCcHHHHHHHHHHHHhCCCEEEecCC
Confidence 4778988886544444444444468887765543
No 335
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=24.49 E-value=2.4e+02 Score=25.89 Aligned_cols=58 Identities=10% Similarity=-0.029 Sum_probs=36.3
Q ss_pred hHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEE
Q 015325 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFA 148 (409)
Q Consensus 86 L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 148 (409)
+.. .++++|++|.|...-..- ..+...+...|+..+.+..+ .+. ..++++.+++.++.
T Consensus 158 ~~~-~~~~~g~~VlV~G~g~iG-~~a~~~a~~~G~~vi~~~~~--~~~-~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 158 LLR-ASLPPGGRLGLYGFGGSA-HLTAQVALAQGATVHVMTRG--AAA-RRLALALGAASAGG 215 (329)
T ss_pred HHh-cCCCCCCEEEEEcCCHHH-HHHHHHHHHCCCeEEEEeCC--hHH-HHHHHHhCCceecc
Confidence 444 789999999999864443 33444455568755444432 223 45678888876653
No 336
>cd04861 LigD_Pol_like LigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. PaeLigD is monomeric, containing an N-terminal phosphoesterase module, a central polymerase (Pol) domain, and a C-terminal ATP-dependent ligase domain. Mycobacterium tuberculosis (Mt)LigD, also found in this group, is monomeric and contains the same modules but these are arranged differently: an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase do
Probab=24.33 E-value=3.4e+02 Score=23.58 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=45.4
Q ss_pred CCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHH
Q 015325 54 RDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESE 133 (409)
Q Consensus 54 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~ 133 (409)
++||+..+ |=+-+...+|.++.+.+..+-..|.+ +|+. ..+-.-+..+.+ +++||.+..+-++
T Consensus 96 e~PD~lvf-DLDP~~~~~f~~v~~~A~~vr~~L~~-lgL~--~f~KTSG~kGlH-------------V~vPl~~~~~~~~ 158 (227)
T cd04861 96 ERPDRLVF-DLDPGPGVPFEDVVEAALLLRELLDE-LGLE--SFPKTSGGKGLH-------------VYVPLAPRYTWDE 158 (227)
T ss_pred CCCCEEEE-ECCCCCCCCHHHHHHHHHHHHHHHHH-cCCc--cceEccCCCeEE-------------EEEEcCCCCCHHH
Confidence 34765544 32236678999999999999999998 9985 233333333222 6788888877666
Q ss_pred HHHHH
Q 015325 134 ISRQI 138 (409)
Q Consensus 134 l~~~l 138 (409)
...+.
T Consensus 159 ~r~fa 163 (227)
T cd04861 159 VRAFA 163 (227)
T ss_pred HHHHH
Confidence 55443
No 337
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=24.13 E-value=2.9e+02 Score=24.12 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=49.7
Q ss_pred CCeEEEecCCCHHHHHHHHHHhcceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCC-------CHHHHHHHHHhC
Q 015325 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPL-------GKDTIMAFASKF 331 (409)
Q Consensus 259 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~-------~~~~~~~~~~~~ 331 (409)
|.++++-.+.....+.+.|.+..+|++.-.+..+..|... +.++.+++||+.- .+...+.+++..
T Consensus 94 gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l~~~~ 165 (240)
T PRK10411 94 GMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQLKSLE 165 (240)
T ss_pred CCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHHHhcC
Confidence 3333333333445566666555678777778778777543 3467888888533 344556666654
Q ss_pred CCCceecccCcccccce
Q 015325 332 PKVVLVQAYGLTESTAG 348 (409)
Q Consensus 332 ~~~~i~~~yG~tE~~~~ 348 (409)
...-++..-|.++.+++
T Consensus 166 ~d~afis~~gi~~~~G~ 182 (240)
T PRK10411 166 IDLFIFSCEGIDSSGAL 182 (240)
T ss_pred CCEEEEeceeECCCCCc
Confidence 46667777887754443
No 338
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=24.09 E-value=7.1e+02 Score=27.51 Aligned_cols=97 Identities=19% Similarity=0.102 Sum_probs=65.6
Q ss_pred CCCcEEEeC---CC----CceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc--hHHHHHHHHHhCCeEccCC
Q 015325 56 DDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (409)
Q Consensus 56 p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~--~~~~~~A~~~~G~~~v~l~ 126 (409)
|+.++++-- .+ +..+|.+.+...+..... . .++.++|++...+|-... +...++..+..|+..+..+
T Consensus 792 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 792 PDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---R-IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---h-hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 677777632 11 245888888766655543 3 677889998888774332 2244667778898887776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCchHHHH
Q 015325 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (409)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 156 (409)
.....+.+.+.+++.++..+.........+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555666777888999999988776555443
No 339
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.71 E-value=3e+02 Score=26.64 Aligned_cols=78 Identities=12% Similarity=-0.087 Sum_probs=56.1
Q ss_pred hhccHHHHHHHHHhhccCC--CCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecC-CCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|+..+...+..+...+. +..+.+++....+-... .+...++++..|+..+..+. ...+.+...++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 3788888766655544431 46678888877775433 33678899999998887754 56788888889888888887
Q ss_pred ch
Q 015325 288 TP 289 (409)
Q Consensus 288 ~p 289 (409)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 340
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=23.31 E-value=3.5e+02 Score=23.25 Aligned_cols=101 Identities=8% Similarity=0.088 Sum_probs=63.2
Q ss_pred hhhccHHHHHHHHHhhccCCCCCCCC--EEEEeCchhhHHhHHHHHHHHH--hCC-eEEEe--cC-CCHHHHHHHHHHhc
Q 015325 210 VMLTHRNLTAAVASSFASSPKRVSPA--VMLFTMPYFHIYGLFFCFRAAA--LME-TAVVM--QR-FDLKMMLKAVEEFR 281 (409)
Q Consensus 210 v~~s~~~l~~~~~~~~~~~~~~~~~d--~~l~~~p~~~~~g~~~~~~~l~--~G~-~~v~~--~~-~~~~~~~~~i~~~~ 281 (409)
+..++....-.+.++...++.++++. ++++....+|.+..+.++-.+. .|- .+++. .. +..+.+++.+++++
T Consensus 113 lLy~k~DYe~~v~aik~~~ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~~d~vi~~l~~~~ 192 (265)
T COG4822 113 LLYYKNDYEICVEAIKDQIPPLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPLVDTVIEYLRKNG 192 (265)
T ss_pred eeechhhHHHHHHHHHHhcCCcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCcHHHHHHHHHHcC
Confidence 34456777777777888775555554 4566667777766655554444 333 33333 22 46788888888888
Q ss_pred ceeEeechHHHHHHHhCCCCCCCCCCCcceeeecCCCCCHHHH----HHHHHhC
Q 015325 282 VTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTI----MAFASKF 331 (409)
Q Consensus 282 ~t~l~~~p~~l~~l~~~~~~~~~~l~~Lr~v~~~G~~~~~~~~----~~~~~~~ 331 (409)
++-+.+.| +++++|+-.-.++. +.|+..|
T Consensus 193 ~~~v~L~P---------------------lMlvAG~Ha~nDMasddedswk~il 225 (265)
T COG4822 193 IKEVHLIP---------------------LMLVAGDHAKNDMASDDEDSWKNIL 225 (265)
T ss_pred CceEEEee---------------------eEEeechhhhhhhcccchHHHHHHH
Confidence 87655443 45666666666665 6666665
No 341
>PRK07787 acyl-CoA synthetase; Validated
Probab=23.05 E-value=3.9e+02 Score=25.80 Aligned_cols=75 Identities=7% Similarity=-0.073 Sum_probs=57.5
Q ss_pred hhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEeech
Q 015325 211 MLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTP 289 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~p 289 (409)
.+|.+.+...+..+...+ .+.|++....+-.- ..+..+++++..|+..+.++ ....+.+...+++.+++.+...+
T Consensus 25 ~~Ty~el~~~~~~~a~~L---~~~~~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~ 100 (471)
T PRK07787 25 VLSRSDLAGAATAVAERV---AGARRVAVLATPTL-ATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPA 100 (471)
T ss_pred EEEHHHHHHHHHHHHHHh---ccCCEEEEECCCCH-HHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecC
Confidence 378889888888877766 24577777666542 22367899999999988876 46789999999999999888865
No 342
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=22.95 E-value=6.3e+02 Score=25.80 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=67.2
Q ss_pred CCCcEEEe--C-----CCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHH-HHHHHhCCeEccCCC
Q 015325 56 DDTVALIN--S-----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY-FSLLSLGVIISPANP 127 (409)
Q Consensus 56 p~~~a~~~--~-----~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~-~A~~~~G~~~v~l~~ 127 (409)
||.+|.+- . ..|.-+||.-+...+..+...+. -++++|++..++|-..-+--++ .++...|.+.+....
T Consensus 190 ~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~---~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~ 266 (613)
T COG1022 190 PDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP---PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKE 266 (613)
T ss_pred ccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC---CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecC
Confidence 78887763 1 12357999999998888777643 2688999999998654444443 445555544444333
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCchHHHHh
Q 015325 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (409)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 157 (409)
+...+..-+...+|.+++.-+...+.+.
T Consensus 267 --~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 267 --DPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred --CHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 5678888999999999998876655543
No 343
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=22.93 E-value=2.2e+02 Score=23.87 Aligned_cols=21 Identities=14% Similarity=0.238 Sum_probs=19.5
Q ss_pred ceeeHHHHHHHHHHHHHHhHh
Q 015325 68 LRVSFSEFTRRTNSLASYLQN 88 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~ 88 (409)
.-+||.|+.+++.++|..+.+
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~ 30 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIAS 30 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHH
Confidence 468999999999999999998
No 344
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=22.91 E-value=4.4e+02 Score=22.81 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=46.4
Q ss_pred hhhHHhHHHHHHHHHh-CCeEEEe-cCCCHHHHHHHHHHhcceeEeechHHHHHHH------hCCCCCCCCCCCcceeee
Q 015325 243 YFHIYGLFFCFRAAAL-METAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMS------KGGSTDGYDLSSLETVAC 314 (409)
Q Consensus 243 ~~~~~g~~~~~~~l~~-G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~p~~l~~l~------~~~~~~~~~l~~Lr~v~~ 314 (409)
-.|..|...+-..+.. |.-++-+ ....++.+....+++|+..+.++..+=..+. ....... ++.==.+.+
T Consensus 115 DvHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG--iRd~v~v~v 192 (227)
T COG5012 115 DVHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG--IRDKVIVMV 192 (227)
T ss_pred cHHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC--CccCeEEee
Confidence 3466666333333332 3333333 3456899999999999999988754322221 1111111 111224666
Q ss_pred cCCCCCHHHHHHH
Q 015325 315 GAAPLGKDTIMAF 327 (409)
Q Consensus 315 ~G~~~~~~~~~~~ 327 (409)
||+|++.+...++
T Consensus 193 GGApvtq~~a~~i 205 (227)
T COG5012 193 GGAPVTQDWADKI 205 (227)
T ss_pred cCccccHHHHHHh
Confidence 9999997766554
No 345
>PRK07591 threonine synthase; Validated
Probab=22.88 E-value=4.6e+02 Score=25.24 Aligned_cols=88 Identities=9% Similarity=0.038 Sum_probs=55.4
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+.++..+..-||++--. +..++. ..+ .|. +.| +....+-.-..+..++.++|..+..+=|..........
T Consensus 106 ~l~~K~E~~nPtGSfKdRga-~~~v~~-A~~-~g~---~~v-v~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~~k~~~ 178 (421)
T PRK07591 106 NLYIKDDSVNPTHSFKDRVV-SVALTA-ARE-LGF---TTV-ACASTGNLANSVAAHAARAGLDSCVFIPADLEAGKIVG 178 (421)
T ss_pred cEEEEeCCCCCccChHHHHH-HHHHHH-HHH-cCC---CEE-EEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHH
Confidence 67777775566778887422 223333 333 453 345 44556666777777888899755444443344445566
Q ss_pred HhhcCCeEEEEcCch
Q 015325 138 IQLSNPVIAFATSSV 152 (409)
Q Consensus 138 l~~~~~~~ii~~~~~ 152 (409)
++..++++++++.+.
T Consensus 179 ~~~~GA~Vi~v~g~~ 193 (421)
T PRK07591 179 TLVYGPTLVAVDGNY 193 (421)
T ss_pred HHHcCCEEEEECCCH
Confidence 789999999998754
No 346
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=22.73 E-value=5.2e+02 Score=24.55 Aligned_cols=54 Identities=9% Similarity=0.029 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC-------CCCHHHHHHHHhhcCCeEEEEc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-------VNTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~-------~~~~~~l~~~l~~~~~~~ii~~ 149 (409)
+.+||.|++-.|.=+.+. -.+..+|+.+++++. ....+++...+.. +.++++..
T Consensus 110 ~~pGDeVlip~P~Y~~y~---~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln 170 (393)
T COG0436 110 LNPGDEVLIPDPGYPSYE---AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILN 170 (393)
T ss_pred cCCCCEEEEeCCCCcCHH---HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEe
Confidence 467888777666433333 335666776655552 2357778777777 77777763
No 347
>PRK08329 threonine synthase; Validated
Probab=22.65 E-value=6.3e+02 Score=23.49 Aligned_cols=87 Identities=15% Similarity=0.068 Sum_probs=54.0
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+.++..+.+-||++- .+..+...+.+ .|. +.|+... .+-.-..+.+++.++|..+..+=|..........
T Consensus 73 ~l~~K~E~~nPtGSfKdR--ga~~~i~~a~~-~g~---~~vv~aS-sGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~ 145 (347)
T PRK08329 73 KVYFKLDYLQPTGSFKDR--GTYVTVAKLKE-EGI---NEVVIDS-SGNAALSLALYSLSEGIKVHVFVSYNASKEKISL 145 (347)
T ss_pred eEEEEeCCCCCCcCCHHH--HHHHHHHHHHH-cCC---CEEEEEC-CCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHH
Confidence 567777755677788873 22233333444 454 3454443 4555556666777888755444444455666677
Q ss_pred HhhcCCeEEEEcCc
Q 015325 138 IQLSNPVIAFATSS 151 (409)
Q Consensus 138 l~~~~~~~ii~~~~ 151 (409)
++..++++++++.+
T Consensus 146 ~~~~GA~v~~v~~~ 159 (347)
T PRK08329 146 LSRLGAELHFVEGD 159 (347)
T ss_pred HHHcCCEEEEECCC
Confidence 89999999999765
No 348
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=22.64 E-value=5.9e+02 Score=24.46 Aligned_cols=73 Identities=10% Similarity=-0.011 Sum_probs=36.6
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCC--CC------------------------CHHHHHHHHhhcCCeEEE
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP--VN------------------------TESEISRQIQLSNPVIAF 147 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~--~~------------------------~~~~l~~~l~~~~~~~ii 147 (409)
.|.+|+|.......+-++- .+...|.-++.+-. .. +..++.+.+++.+++++|
T Consensus 298 ~gk~v~i~~~~~~~~~l~~-~L~e~G~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~el~~~i~~~~pdlii 376 (428)
T cd01965 298 GGKRVAIAGDPDLLLGLSR-FLLEMGAEPVAAVTGTDNPPFEKRMELLASLEGIPAEVVFVGDLWDLESLAKEEPVDLLI 376 (428)
T ss_pred cCCEEEEEcChHHHHHHHH-HHHHcCCcceEEEEcCCCchhHHHHHHhhhhcCCCceEEECCCHHHHHHHhhccCCCEEE
Confidence 4778888876554433332 33356654432211 11 334555555666666666
Q ss_pred EcCchHHHHhhcCCeEEEeC
Q 015325 148 ATSSVVHKLAKLKHRTILID 167 (409)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~ 167 (409)
.+........+++...+.+.
T Consensus 377 g~~~~~~~a~~~~ip~i~~~ 396 (428)
T cd01965 377 GNSHGRYLARDLGIPLVRVG 396 (428)
T ss_pred ECchhHHHHHhcCCCEEEec
Confidence 66554444444444444333
No 349
>PRK06382 threonine dehydratase; Provisional
Probab=22.59 E-value=4.4e+02 Score=25.13 Aligned_cols=89 Identities=8% Similarity=0.017 Sum_probs=55.1
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+-.+..+..=||++--. .+.+.. +.+ .+.++| | +....+-.-..+.++|...|..+..+=|..........
T Consensus 41 ~v~~K~E~~nptGSfK~Rga-~~~i~~-~~~-~~~~~g--v-v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~ 114 (406)
T PRK06382 41 DIYFKLENFQKTGSFKSRGA-VFKFSK-LSE-DELRNG--V-ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNA 114 (406)
T ss_pred EEEEEecCCCCCCCCHHHHH-HHHHHh-cch-hccCCe--E-EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHH
Confidence 56666664455556654322 122222 333 343444 3 34444566666778899999866666665566666778
Q ss_pred HhhcCCeEEEEcCch
Q 015325 138 IQLSNPVIAFATSSV 152 (409)
Q Consensus 138 l~~~~~~~ii~~~~~ 152 (409)
++..+++++++....
T Consensus 115 ~~~~GA~Vv~~~~~~ 129 (406)
T PRK06382 115 VEAYGAHVILTGRDY 129 (406)
T ss_pred HHHcCCEEEEECCCH
Confidence 999999999988753
No 350
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=22.41 E-value=2.7e+02 Score=20.56 Aligned_cols=49 Identities=14% Similarity=0.121 Sum_probs=33.5
Q ss_pred ceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEcc
Q 015325 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISP 124 (409)
Q Consensus 68 ~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~ 124 (409)
..+.+.++. ..+.+ .+..+++.|++++.++.....+...+...|..-+-
T Consensus 41 iniP~~~l~-------~~l~~-l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~ 89 (104)
T PRK10287 41 INIPLKEVK-------ERIAT-AVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAE 89 (104)
T ss_pred EECCHHHHH-------HHHHh-cCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEE
Confidence 346666543 33555 56566778999998888877777777888875443
No 351
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=22.23 E-value=2.7e+02 Score=25.72 Aligned_cols=58 Identities=9% Similarity=0.089 Sum_probs=37.0
Q ss_pred hHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEE
Q 015325 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFA 148 (409)
Q Consensus 86 L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 148 (409)
+.. .++++|++|+|... +.--..+...+...|+..+.+.. +.+++. .+++.+++.++.
T Consensus 159 ~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~--~~~~~~-~~~~~Ga~~~i~ 216 (349)
T TIGR03201 159 AVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDI--DPEKLE-MMKGFGADLTLN 216 (349)
T ss_pred HHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcC--CHHHHH-HHHHhCCceEec
Confidence 445 68899999999987 55555555555566876554433 344444 456677776654
No 352
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=22.18 E-value=5e+02 Score=25.56 Aligned_cols=99 Identities=10% Similarity=-0.060 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCCCCCcchhhhccHHHHHHHHHhhccCCCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEecCC-
Q 015325 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF- 268 (409)
Q Consensus 190 ~~~~~a~i~~TSGTTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~- 268 (409)
.++.++++...+++ ...+|.+.+...+..+...+....++|++...++-+..+ +..+++++..|+.+++.+..
T Consensus 15 ~~~~~a~~~~~~~~-----~~~~ty~el~~~~~~lA~~L~~~~~g~~V~l~~~~~~e~-~~~~la~~~~G~~~~~~~~~~ 88 (525)
T PRK05851 15 SGRDLVVLDRESGL-----WRRHPWPEVHGRAENVAARLLDRDRPGAVGLVGEPTVEL-VAAIQGAWLAGAAVSILPGPV 88 (525)
T ss_pred CCCceEEeCCCCCc-----ceeecHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCCHHH-HHHHHHHHHcCCCCcCCCCCC
Confidence 35666665543332 245788888887777777662226788888877765432 35788899999876544321
Q ss_pred ---C----HHHHHHHHHHhcceeEeechHHHHH
Q 015325 269 ---D----LKMMLKAVEEFRVTHAAVTPPIVVA 294 (409)
Q Consensus 269 ---~----~~~~~~~i~~~~~t~l~~~p~~l~~ 294 (409)
+ .+.+...+.+.++..+...+..+..
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 121 (525)
T PRK05851 89 RGADDGRWADATLTRFAGIGVRTVLSHGSHLER 121 (525)
T ss_pred CccchhhHHHHHHHHHHhcCCCEEEeCHHHHHH
Confidence 1 2344556778888888877765543
No 353
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=22.13 E-value=4.8e+02 Score=26.58 Aligned_cols=67 Identities=13% Similarity=-0.031 Sum_probs=42.4
Q ss_pred CCCCEEEEeCchhhHHhH--HHHHHHHHhCCeEEEecC-CC---HHHHHHHHHHh--cce---eEeechHHHHHHHhC
Q 015325 232 VSPAVMLFTMPYFHIYGL--FFCFRAAALMETAVVMQR-FD---LKMMLKAVEEF--RVT---HAAVTPPIVVAMSKG 298 (409)
Q Consensus 232 ~~~d~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~~--~~t---~l~~~p~~l~~l~~~ 298 (409)
.+--+++...|+.+...+ +.+..+|..|.++++-+. .. ...+.+++.+. ... ++.+....-..|+.+
T Consensus 248 eP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~ 325 (604)
T PLN02419 248 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDD 325 (604)
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhC
Confidence 345678888898887666 567789999999999864 22 34456666664 333 333333344555544
No 354
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=22.07 E-value=6.4e+02 Score=23.95 Aligned_cols=56 Identities=20% Similarity=0.412 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC-CHHHHHHHHhhcCCeEEEEcC
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN-TESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~ 150 (409)
.|.+|+|+......+-.+-+ +..+|..++.+.... ..+.....++.......+.+.
T Consensus 275 ~Gkrv~i~g~~~~~~~la~~-L~elGm~vv~~~t~~~~~~~~~~~~~~l~~~~~v~~~ 331 (396)
T cd01979 275 RGKSIFFMGDNLLEIPLARF-LTRCGMIVVEVGTPYLDKRFQAAELELLPPMVRIVEK 331 (396)
T ss_pred cCCEEEEECCchHHHHHHHH-HHHCCCEEEeeCCCcCChHHHHHHHHhcCCCCeEEEC
Confidence 48899999875544444433 334999888776543 333334455555445555554
No 355
>PRK12483 threonine dehydratase; Reviewed
Probab=22.07 E-value=7e+02 Score=24.85 Aligned_cols=90 Identities=14% Similarity=0.075 Sum_probs=55.5
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~ 137 (409)
++.+-.+..+..-||+.= -..+.+.+...+ ..++| .|....+-....+.++|..+|..+..+=|...+......
T Consensus 53 ~IylK~E~lqptGSfK~R-GA~n~i~~l~~~--~~~~G---VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~ 126 (521)
T PRK12483 53 QVLLKREDLQPVFSFKIR-GAYNKMARLPAE--QLARG---VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDG 126 (521)
T ss_pred EEEEEEcCCCCCCchHHH-HHHHHHHHhHHH--HhcCc---EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHH
Confidence 456666644555577542 223344432222 22334 344555667777788999999866665555555666778
Q ss_pred HhhcCCeEEEEcCchH
Q 015325 138 IQLSNPVIAFATSSVV 153 (409)
Q Consensus 138 l~~~~~~~ii~~~~~~ 153 (409)
++..+++++++.....
T Consensus 127 ~r~~GAeVil~g~~~d 142 (521)
T PRK12483 127 VRAHGGEVVLHGESFP 142 (521)
T ss_pred HHHCCCEEEEECCCHH
Confidence 9999999999976543
No 356
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=21.91 E-value=4.8e+02 Score=21.91 Aligned_cols=84 Identities=11% Similarity=0.073 Sum_probs=52.7
Q ss_pred CceeeHHHHHHHHHHHHHHhHh---c---cCCCCCCEEEEEcCC-CCchH---HHHHHHHHhCCeEccCCCCCCHHHHHH
Q 015325 67 GLRVSFSEFTRRTNSLASYLQN---V---TRLSKNDTAFVLSTN-SIEIP---ILYFSLLSLGVIISPANPVNTESEISR 136 (409)
Q Consensus 67 ~~~~Ty~el~~~~~~la~~L~~---~---~gv~~g~~V~i~~~~-~~~~~---~~~~A~~~~G~~~v~l~~~~~~~~l~~ 136 (409)
..+++..|..-.+..+-..+.. . .+...+.+|.+.+.. ..+-+ .+...+-..|.-.+.+..+.+.+++..
T Consensus 48 ~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~ 127 (201)
T cd02070 48 EGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVE 127 (201)
T ss_pred cCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 4577777766655443332222 0 222223455554443 33322 223345568888899999999999999
Q ss_pred HHhhcCCeEEEEcC
Q 015325 137 QIQLSNPVIAFATS 150 (409)
Q Consensus 137 ~l~~~~~~~ii~~~ 150 (409)
.+.+.+|++|..+.
T Consensus 128 ~~~~~~~d~v~lS~ 141 (201)
T cd02070 128 AVKEHKPDILGLSA 141 (201)
T ss_pred HHHHcCCCEEEEec
Confidence 99999999988764
No 357
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=21.81 E-value=3.5e+02 Score=25.61 Aligned_cols=56 Identities=21% Similarity=0.194 Sum_probs=32.3
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (409)
+++||.|++..+........+-.+...|+.+...+++ .+++...++..+.++|+++
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie 144 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIE 144 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEE
Confidence 6788888776544333333332234567665555443 5667776665466777764
No 358
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=21.79 E-value=1.3e+02 Score=22.98 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=40.6
Q ss_pred eHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHH--HHHHHh-CCeEccC
Q 015325 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY--FSLLSL-GVIISPA 125 (409)
Q Consensus 71 Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~--~A~~~~-G~~~v~l 125 (409)
|-.++.+.+..+-..+.+..++.+.|.|-++..-+.+.-+.+ .|+-+. |...||+
T Consensus 14 t~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~aaR~~~Gw~~Vpl 71 (117)
T TIGR01796 14 EAEEIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPAAAARGLPGWTDVPV 71 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChHHHHHhccCCCCcce
Confidence 667889999888877766689999999999877766655554 555555 6655554
No 359
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=21.73 E-value=6.3e+02 Score=24.62 Aligned_cols=74 Identities=14% Similarity=0.056 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC-CHHHHHHHHhhcCCeEEEEcC-chH---HHHhhcCCeEEEeC
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN-TESEISRQIQLSNPVIAFATS-SVV---HKLAKLKHRTILID 167 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~-~~~---~~~~~~~~~~~~~~ 167 (409)
.|.+|+|+......+..+-+....+|..++.+.... ..+++..+++......++.++ +.. ..+.+.+..++..+
T Consensus 324 ~GkrvaI~~~~~~~~~l~~~l~~ElGmevv~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~~~e~~~~i~~~~pDllig~ 402 (457)
T TIGR01284 324 RGKKVWVWSGGPKLWHWPRPLEDELGMEVVAVSTKFGHEDDYEKIIARVREGTVIIDDPNELELEEIIEKYKPDIILTG 402 (457)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEEEEeCCHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHhcCCCEEEec
Confidence 488999988764443333333346999887765533 466777777776655444443 322 22334444454443
No 360
>cd04865 LigD_Pol_like_2 LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=21.50 E-value=4.1e+02 Score=23.11 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=44.7
Q ss_pred CCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHH
Q 015325 54 RDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESE 133 (409)
Q Consensus 54 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~ 133 (409)
++||+..+ |=+-+....|.++.+.+..+-..|.+ +|+. ..+-.-+..+.+ +++||.+..+-++
T Consensus 97 e~PD~lvf-DLDP~~~~~f~~v~~~A~~vr~~L~~-lgL~--sf~KTSG~kGlH-------------v~vPl~~~~~~~~ 159 (228)
T cd04865 97 DHPDELVI-DLDPQPGTSFEDVVEVALLVREVLDE-LGLR--GYPKTSGARGLH-------------IYVPIAPRYTFEE 159 (228)
T ss_pred CCCCEEEE-ECCCCCCCCHHHHHHHHHHHHHHHHH-cCCc--cceEccCCCeEE-------------EEEEcCCCCCHHH
Confidence 44776544 32236678999999999999999998 9985 233333333322 6788888877666
Q ss_pred HHHH
Q 015325 134 ISRQ 137 (409)
Q Consensus 134 l~~~ 137 (409)
+..+
T Consensus 160 ~r~f 163 (228)
T cd04865 160 VRRF 163 (228)
T ss_pred HHHH
Confidence 5443
No 361
>TIGR02778 ligD_pol DNA polymerase LigD, polymerase domain. DNA repair of double-stranded breaks by non-homologous end joining (NHEJ) is accomplished by a two-protein system that is present in a minority of prokaryotes. One component is the Ku protein (see TIGR02772), which binds DNA ends. The other is a DNA ligase, a protein that is a multidomain polypeptide in most of those bacteria that have NHEJ, a permuted polypeptide in Mycobacterium tuberculosis and a few other species, and the product of tandem genes in some other bacteria. This model represents the polymerase domain.
Probab=21.42 E-value=4e+02 Score=23.43 Aligned_cols=67 Identities=12% Similarity=0.180 Sum_probs=43.9
Q ss_pred CCCCCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHH
Q 015325 54 RDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESE 133 (409)
Q Consensus 54 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~ 133 (409)
++||++.+ |=+-+...+|.++.+.+..+-..|.+ +|+.. .+-.-+..+.+ +++||.+..+-++
T Consensus 112 ~~PD~lvf-DLDP~~~~~f~~v~~~A~~~r~~L~~-lgL~~--f~KTSG~kGlH-------------V~vPl~~~~~~~~ 174 (245)
T TIGR02778 112 EKPDRIVF-DLDPGPGVAWKLVVEAAQLIRELLDE-LGLES--FVKTSGGKGLH-------------VYVPLRPTLSWDE 174 (245)
T ss_pred CCCCEEEE-ECCCCCCCCHHHHHHHHHHHHHHHHH-cCCcc--ceEccCCCeEE-------------EEEECCCCCCHHH
Confidence 34776554 22225668999999999999999998 99852 23333333222 6788888877666
Q ss_pred HHHH
Q 015325 134 ISRQ 137 (409)
Q Consensus 134 l~~~ 137 (409)
+..+
T Consensus 175 ~r~f 178 (245)
T TIGR02778 175 VKDF 178 (245)
T ss_pred HHHH
Confidence 4443
No 362
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=21.20 E-value=2.7e+02 Score=28.89 Aligned_cols=47 Identities=13% Similarity=0.134 Sum_probs=36.3
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC---------CH-----HHHHHHHhhc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN---------TE-----SEISRQIQLS 141 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~---------~~-----~~l~~~l~~~ 141 (409)
+++||.|. +-+|+..++.. |+..+|+.+|.+.|.. +. +.+++.+++.
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~ 292 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAAT 292 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhC
Confidence 57899554 77788888665 9999999999998863 33 7788887664
No 363
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=21.01 E-value=2.3e+02 Score=25.91 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=31.8
Q ss_pred eEccCCCCCCHHHHHHHHhhcCCeEEEEcCchHHHHhhcCCeEEEeCC
Q 015325 121 IISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS 168 (409)
Q Consensus 121 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 168 (409)
+.|.+.++ ..+....++++.++++||.|+.+....-.....+++++.
T Consensus 101 ~~V~V~~d-R~~a~~~~~~~~~~dviilDDGfQh~~l~rD~~IvlvD~ 147 (311)
T TIGR00682 101 ATVVASKD-RKDAILLILEQLDPDVIILDDGLQHRKLHRDVEIVVVDG 147 (311)
T ss_pred CcEEEeCh-HHHHHHHHHhcCCCCEEEECCCCcCccccCCeEEEEECC
Confidence 45556655 444555566667899999999876655555677777764
No 364
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.93 E-value=2.9e+02 Score=20.95 Aligned_cols=38 Identities=16% Similarity=0.008 Sum_probs=32.5
Q ss_pred HHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 015325 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (409)
Q Consensus 113 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 150 (409)
...-..|.-++.+.+..+.+++...+.+.+|++|..+.
T Consensus 21 ~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 21 RALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 34566788999999999999999999999999998775
No 365
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=20.91 E-value=2.2e+02 Score=26.10 Aligned_cols=49 Identities=10% Similarity=0.106 Sum_probs=34.8
Q ss_pred HHHHHHhHhccCCCCCCEEEEEcCCCCch-HHHHHHHHHhCCe-EccCCCCC
Q 015325 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVI-ISPANPVN 129 (409)
Q Consensus 80 ~~la~~L~~~~gv~~g~~V~i~~~~~~~~-~~~~~A~~~~G~~-~v~l~~~~ 129 (409)
..++..|.+ +|+.+.++|++++.++..+ ..+++.+...|.. +..|+-.+
T Consensus 89 ~~~~~~l~~-~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~ 139 (320)
T PLN02723 89 EAFAAAVSA-LGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGL 139 (320)
T ss_pred HHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCH
Confidence 567888998 9999999999998776544 3445677778863 33455443
No 366
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=20.71 E-value=3.8e+02 Score=25.31 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCCCHHHHHHHHhhcCCeEEEEc
Q 015325 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 92 v~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 149 (409)
+++||.|++..+.-......+-.....+.+-+......+.+.+...++. ++++|+..
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~ 143 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIE 143 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEE
Confidence 5678877665543332333322333343333333223456667666643 46666653
No 367
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=20.67 E-value=4.3e+02 Score=20.87 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhHhc--cCCCCCCEEEE-EcCCCCchHHH-HHHHHHhCCeEccCCCCC-------CHHHHHHHHhhc
Q 015325 73 SEFTRRTNSLASYLQNV--TRLSKNDTAFV-LSTNSIEIPIL-YFSLLSLGVIISPANPVN-------TESEISRQIQLS 141 (409)
Q Consensus 73 ~el~~~~~~la~~L~~~--~gv~~g~~V~i-~~~~~~~~~~~-~~A~~~~G~~~v~l~~~~-------~~~~l~~~l~~~ 141 (409)
..|.+++..+-....+. ...-+|..|++ +..++...-.+ ..|+.++|+.++.+++.. +..+..+++...
T Consensus 15 ~~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~ 94 (142)
T PF02729_consen 15 EALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh
Confidence 34556666666666551 13445677666 46666666555 558999999999888642 667778888888
Q ss_pred CCeEEEEcCch
Q 015325 142 NPVIAFATSSV 152 (409)
Q Consensus 142 ~~~~ii~~~~~ 152 (409)
++++++-...
T Consensus 95 -~D~iv~R~~~ 104 (142)
T PF02729_consen 95 -VDAIVIRHPS 104 (142)
T ss_dssp -CSEEEEEESS
T ss_pred -hheEEEEecc
Confidence 7777765433
No 368
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=20.63 E-value=5.1e+02 Score=23.70 Aligned_cols=87 Identities=9% Similarity=-0.013 Sum_probs=52.4
Q ss_pred CcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCCC-CHHHHHH
Q 015325 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN-TESEISR 136 (409)
Q Consensus 58 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~~-~~~~l~~ 136 (409)
++.+..+..+.+-||++.- ....+.. +.+ .| ...++....+-.-..+.+++...|..++.+-|.. ...+...
T Consensus 40 ~i~~K~E~~nptGSfKdR~-a~~~l~~-a~~-~g----~~~vv~aSsGN~g~a~A~~a~~~g~~~~v~~p~~~~s~~k~~ 112 (328)
T TIGR00260 40 NLYVLELFHNPTLSFKDRG-MAVALTK-ALE-LG----NDTVLCASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLA 112 (328)
T ss_pred cEEehhhccCCchhhHhhh-HHHHHHH-HHH-cC----CCEEEEeCCcHHHHHHHHHhccCCCcEEEEECCCCCCHHHHH
Confidence 5666666556777888766 2222333 333 33 2233444445555555578888998665555543 3355566
Q ss_pred HHhhcCCeEEEEcCc
Q 015325 137 QIQLSNPVIAFATSS 151 (409)
Q Consensus 137 ~l~~~~~~~ii~~~~ 151 (409)
.++..++++++++.+
T Consensus 113 ~~~~~GA~Vi~~~~~ 127 (328)
T TIGR00260 113 QALGYNAEVVAIDGN 127 (328)
T ss_pred HHHhcCcEEEEecCC
Confidence 677899999999864
No 369
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=20.49 E-value=4.6e+02 Score=24.96 Aligned_cols=35 Identities=6% Similarity=-0.067 Sum_probs=19.8
Q ss_pred CCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec
Q 015325 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (409)
Q Consensus 231 ~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 266 (409)
.....+++.-+.-..-+|. .+-.....+..+.++.
T Consensus 312 ~~~~~~I~TKlDet~~~G~-~l~~~~~~~~Pi~yit 346 (388)
T PRK12723 312 FSYKTVIFTKLDETTCVGN-LISLIYEMRKEVSYVT 346 (388)
T ss_pred CCCCEEEEEeccCCCcchH-HHHHHHHHCCCEEEEe
Confidence 4456666766665544443 3344455667776663
No 370
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=20.26 E-value=3.7e+02 Score=26.23 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=49.1
Q ss_pred CCHHHHHhhccCCCCCCCC-CCcEEEeCCCCceeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCchHHH
Q 015325 38 ISAVDYVSSLRATLPWRDD-DTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (409)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p-~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~~~~~ 111 (409)
..+.+.+.++..++.-.+. +..|+-.. .....+|+++.+.++.++..+.. ..+++..+.|++.+...=+.-
T Consensus 354 ~~l~~~i~~~l~~f~~~~~~~~~alal~-g~~~~~y~~iq~la~~i~~~~~~--~~~~~~Pliiv~e~D~aK~LG 425 (475)
T PRK10719 354 EDLVAAIQQALAWFDLDPETDAYALALP-GSLPPSYAAIQTLAKALVDGVAR--FPNKPHPLIVVAEQDMGKALG 425 (475)
T ss_pred HhHHHHHHHHHHHhhccCCcCcEEEEcC-CCCCCCHHHHHHHHHHHHHHHHh--hccCCCCEEEEEcccHHHHHH
Confidence 4667777766665532222 34555544 24789999999999999999997 456677888888876654444
No 371
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=20.23 E-value=4.5e+02 Score=25.93 Aligned_cols=78 Identities=10% Similarity=-0.049 Sum_probs=56.9
Q ss_pred hhccHHHHHHHHHhhccC--CCCCCCCEEEEeCchhhHHhHHHHHHHHHhCCeEEEec-CCCHHHHHHHHHHhcceeEee
Q 015325 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (409)
Q Consensus 211 ~~s~~~l~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 287 (409)
.+|...+...+..+...+ .+..+++++....+-... .....++++..|+.++..+ ......+...+++.++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPD-HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 467777765555544433 157889999888886543 2356788899999988775 467889999999999998886
Q ss_pred ch
Q 015325 288 TP 289 (409)
Q Consensus 288 ~p 289 (409)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 372
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=20.16 E-value=3.9e+02 Score=23.83 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=43.3
Q ss_pred cCCCCCCEEEEEcCCCCchHHHHHHHHHhCCeE--ccCCCCCCHHHHHHHHhhcCCeEEE
Q 015325 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVII--SPANPVNTESEISRQIQLSNPVIAF 147 (409)
Q Consensus 90 ~gv~~g~~V~i~~~~~~~~~~~~~A~~~~G~~~--v~l~~~~~~~~l~~~l~~~~~~~ii 147 (409)
..--+|-+|+.++.=..+..+.+..+..+||-+ ...||....+++...|.+.+..+.-
T Consensus 38 ~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A 97 (268)
T PF05221_consen 38 EKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFA 97 (268)
T ss_dssp T-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE
T ss_pred cCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEE
Confidence 345579999999999999999999999999854 4667888899999999888875533
No 373
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=20.14 E-value=1.5e+02 Score=20.90 Aligned_cols=39 Identities=23% Similarity=0.152 Sum_probs=24.3
Q ss_pred eeeHHHHHHHHHHHHHHhHhccCCCCCCEEEEEcCCCCc
Q 015325 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (409)
Q Consensus 69 ~~Ty~el~~~~~~la~~L~~~~gv~~g~~V~i~~~~~~~ 107 (409)
.-|-++=.+.-..++..|.+..|+.+.|..+++..|..+
T Consensus 39 gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~e 77 (82)
T PF14552_consen 39 GRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPRE 77 (82)
T ss_dssp ---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-GG
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCcc
Confidence 345666666677888888766899999998888777643
No 374
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=20.03 E-value=5.6e+02 Score=25.46 Aligned_cols=56 Identities=14% Similarity=0.102 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCCCchHHHHHHHHHhCCeEccCCCC--CCHHHHHHHHhhcCCeEEEEc
Q 015325 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV--NTESEISRQIQLSNPVIAFAT 149 (409)
Q Consensus 94 ~g~~V~i~~~~~~~~~~~~~A~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ii~~ 149 (409)
.|.+|+|+...+..+-++-+..-.+|..++..... ...+.+...++.....+++.+
T Consensus 304 ~Gkrv~I~gd~~~a~~l~~~L~~ELGm~vv~~g~~~~~~~~~~~~~~~~~~~~~~i~~ 361 (513)
T CHL00076 304 TGKKAVVFGDATHAASMTKILAREMGIRVSCAGTYCKHDAEWFKEQVQGFCDEILITD 361 (513)
T ss_pred CCCEEEEEcCchHHHHHHHHHHHhCCCEEEEecCcccchhHHHHHHHHHhccCcEEec
Confidence 57889888866555555555666888887754321 122333334444444444543
Done!