Query 015327
Match_columns 409
No_of_seqs 393 out of 3091
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 05:16:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015327.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015327hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 6.2E-85 1.3E-89 651.2 25.7 399 1-409 365-942 (942)
2 COG0474 MgtA Cation transport 100.0 1.3E-65 2.9E-70 561.9 27.9 344 10-357 412-777 (917)
3 KOG0202 Ca2+ transporting ATPa 100.0 1E-63 2.2E-68 513.0 27.5 339 10-349 422-810 (972)
4 KOG0204 Calcium transporting A 100.0 1.2E-63 2.6E-68 512.0 24.4 338 11-349 507-871 (1034)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 9E-60 1.9E-64 521.0 32.1 319 30-349 523-883 (1053)
6 PRK10517 magnesium-transportin 100.0 3.9E-58 8.5E-63 501.9 31.1 329 10-344 417-763 (902)
7 PRK15122 magnesium-transportin 100.0 8.3E-58 1.8E-62 499.9 32.6 333 10-349 415-767 (903)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 9.8E-58 2.1E-62 503.4 31.8 334 10-346 444-798 (941)
9 TIGR01524 ATPase-IIIB_Mg magne 100.0 3.3E-57 7.1E-62 494.3 32.7 329 10-344 382-728 (867)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2.6E-57 5.7E-62 501.7 32.1 336 10-346 422-813 (997)
11 TIGR01647 ATPase-IIIA_H plasma 100.0 1.2E-56 2.7E-61 483.9 31.3 324 2-334 323-649 (755)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3.1E-56 6.7E-61 490.0 31.2 338 10-349 378-762 (917)
13 TIGR01657 P-ATPase-V P-type AT 100.0 6.5E-56 1.4E-60 493.3 27.0 331 10-344 511-924 (1054)
14 TIGR01652 ATPase-Plipid phosph 100.0 2.8E-55 6.1E-60 489.2 24.9 337 11-349 470-905 (1057)
15 PLN03190 aminophospholipid tra 100.0 2.9E-54 6.2E-59 479.1 28.5 344 11-356 566-1016(1178)
16 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.2E-53 2.6E-58 468.3 32.6 328 11-349 405-750 (884)
17 KOG0206 P-type ATPase [General 100.0 1.6E-52 3.4E-57 453.0 12.4 325 29-355 526-938 (1151)
18 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.4E-52 7.3E-57 427.4 13.3 339 8-347 442-836 (1019)
19 KOG0210 P-type ATPase [Inorgan 100.0 8.3E-49 1.8E-53 394.1 13.9 316 25-346 532-914 (1051)
20 PRK14010 potassium-transportin 100.0 1.9E-45 4.2E-50 387.2 25.5 236 6-290 337-573 (673)
21 KOG0208 Cation transport ATPas 100.0 1.1E-45 2.4E-50 384.5 18.9 281 31-316 600-946 (1140)
22 PRK01122 potassium-transportin 100.0 1.2E-42 2.7E-47 366.3 26.3 232 11-290 342-577 (679)
23 TIGR01497 kdpB K+-transporting 100.0 7.4E-39 1.6E-43 337.1 26.4 234 10-290 342-578 (675)
24 KOG0209 P-type ATPase [Inorgan 100.0 7.5E-37 1.6E-41 312.9 15.7 234 11-247 539-833 (1160)
25 TIGR01494 ATPase_P-type ATPase 100.0 2.7E-34 5.9E-39 298.4 26.9 222 9-299 259-481 (499)
26 COG2217 ZntA Cation transport 100.0 7.2E-34 1.6E-38 300.1 26.9 262 10-335 447-709 (713)
27 KOG0207 Cation transport ATPas 100.0 1.7E-33 3.7E-38 293.5 23.6 276 11-337 627-903 (951)
28 PRK11033 zntA zinc/cadmium/mer 100.0 5.7E-31 1.2E-35 283.9 24.7 225 10-297 479-706 (741)
29 COG2216 KdpB High-affinity K+ 100.0 6.7E-31 1.4E-35 258.8 17.5 197 35-278 370-567 (681)
30 PRK10671 copA copper exporting 100.0 2.2E-27 4.7E-32 260.2 27.0 265 10-333 560-827 (834)
31 TIGR01525 ATPase-IB_hvy heavy 100.0 3.3E-27 7.2E-32 248.1 26.8 236 9-300 290-528 (556)
32 TIGR01512 ATPase-IB2_Cd heavy 99.9 1.3E-26 2.7E-31 242.6 23.2 226 7-301 280-508 (536)
33 TIGR01511 ATPase-IB1_Cu copper 99.9 4E-26 8.7E-31 239.8 24.1 224 10-297 320-544 (562)
34 PF00702 Hydrolase: haloacid d 99.8 1.5E-18 3.2E-23 159.6 9.7 132 64-240 80-215 (215)
35 COG4087 Soluble P-type ATPase 99.6 1.2E-15 2.6E-20 126.1 10.8 124 117-271 19-145 (152)
36 PF13246 Hydrolase_like2: Puta 99.4 1.4E-12 3E-17 104.4 6.6 65 9-74 19-89 (91)
37 PRK01158 phosphoglycolate phos 99.2 3.1E-11 6.8E-16 112.7 9.1 145 129-273 21-226 (230)
38 PRK10513 sugar phosphate phosp 99.2 6.8E-11 1.5E-15 113.3 10.9 67 208-274 196-266 (270)
39 COG0561 Cof Predicted hydrolas 99.2 9.9E-11 2.1E-15 111.9 11.9 154 121-274 12-259 (264)
40 PRK11133 serB phosphoserine ph 99.2 7.3E-11 1.6E-15 115.9 10.6 131 128-273 181-316 (322)
41 TIGR01487 SPP-like sucrose-pho 99.2 7.8E-11 1.7E-15 109.2 8.9 145 128-272 18-215 (215)
42 PRK15126 thiamin pyrimidine py 99.2 1.1E-10 2.4E-15 112.1 9.7 66 208-273 188-259 (272)
43 PRK10976 putative hydrolase; P 99.1 2.9E-10 6.2E-15 108.7 11.8 66 208-273 190-261 (266)
44 TIGR02137 HSK-PSP phosphoserin 99.1 3.7E-10 8.1E-15 103.9 11.6 131 128-275 68-198 (203)
45 TIGR01482 SPP-subfamily Sucros 99.1 2.4E-10 5.3E-15 106.2 9.7 146 128-273 15-222 (225)
46 TIGR02726 phenyl_P_delta pheny 99.1 5.2E-10 1.1E-14 99.8 9.6 104 135-268 41-146 (169)
47 PF08282 Hydrolase_3: haloacid 99.1 5.8E-10 1.3E-14 104.3 9.5 66 207-272 185-254 (254)
48 TIGR01670 YrbI-phosphatas 3-de 99.0 7.6E-10 1.7E-14 97.4 9.1 105 136-272 36-145 (154)
49 PRK10530 pyridoxal phosphate ( 99.0 1.4E-09 3E-14 104.1 11.4 66 208-273 199-268 (272)
50 TIGR00338 serB phosphoserine p 99.0 1.2E-09 2.6E-14 101.3 10.2 128 128-271 85-218 (219)
51 PLN02887 hydrolase family prot 99.0 3E-09 6.5E-14 111.7 12.6 67 208-274 507-577 (580)
52 TIGR00099 Cof-subfamily Cof su 98.9 3.6E-09 7.8E-14 100.6 8.2 65 208-272 188-256 (256)
53 COG0560 SerB Phosphoserine pho 98.9 6.5E-09 1.4E-13 96.2 9.6 119 127-260 76-199 (212)
54 TIGR01486 HAD-SF-IIB-MPGP mann 98.9 1.2E-08 2.6E-13 97.1 11.3 66 208-273 176-253 (256)
55 PRK09484 3-deoxy-D-manno-octul 98.8 2.3E-08 4.9E-13 90.6 9.0 99 135-265 55-157 (183)
56 PRK13582 thrH phosphoserine ph 98.8 5.4E-08 1.2E-12 89.1 11.5 129 128-274 68-197 (205)
57 PRK03669 mannosyl-3-phosphogly 98.8 4.4E-08 9.5E-13 94.1 11.1 68 207-274 186-266 (271)
58 COG1778 Low specificity phosph 98.7 2.8E-08 6E-13 85.5 7.2 114 135-280 42-163 (170)
59 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.7 6.5E-08 1.4E-12 88.0 9.2 117 128-257 80-200 (201)
60 PRK00192 mannosyl-3-phosphogly 98.7 8.7E-08 1.9E-12 92.2 10.3 67 208-274 190-268 (273)
61 TIGR03333 salvage_mtnX 2-hydro 98.6 3.1E-07 6.6E-12 85.1 11.1 138 126-273 68-209 (214)
62 PF12710 HAD: haloacid dehalog 98.5 1.6E-07 3.4E-12 84.8 5.7 92 131-237 92-192 (192)
63 PLN02954 phosphoserine phospha 98.5 1.8E-06 3.9E-11 80.2 11.7 132 128-271 84-222 (224)
64 KOG1615 Phosphoserine phosphat 98.4 3.7E-07 8E-12 81.2 6.3 109 128-246 88-199 (227)
65 PRK09552 mtnX 2-hydroxy-3-keto 98.4 1.1E-06 2.5E-11 81.6 9.9 134 128-272 74-212 (219)
66 PRK13222 phosphoglycolate phos 98.4 3.3E-06 7.2E-11 78.3 11.8 127 127-274 92-223 (226)
67 TIGR01489 DKMTPPase-SF 2,3-dik 98.4 1.5E-06 3.2E-11 78.1 8.4 114 127-244 71-186 (188)
68 COG0546 Gph Predicted phosphat 98.3 4.2E-06 9.1E-11 77.9 10.9 126 126-272 87-217 (220)
69 TIGR01485 SPP_plant-cyano sucr 98.3 2.2E-06 4.7E-11 81.3 9.1 149 126-274 19-245 (249)
70 TIGR01488 HAD-SF-IB Haloacid D 98.3 1.5E-06 3.1E-11 77.5 7.0 101 128-239 73-177 (177)
71 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 2.7E-06 6E-11 77.6 8.2 109 126-247 85-198 (202)
72 TIGR01454 AHBA_synth_RP 3-amin 98.2 7.7E-06 1.7E-10 75.0 10.3 124 128-272 75-203 (205)
73 cd01427 HAD_like Haloacid deha 98.2 5.5E-06 1.2E-10 69.3 8.3 118 124-244 20-138 (139)
74 TIGR02471 sucr_syn_bact_C sucr 98.2 2.5E-06 5.3E-11 80.2 5.9 68 207-274 158-233 (236)
75 PLN02382 probable sucrose-phos 98.1 1.4E-05 3E-10 81.4 10.3 67 208-274 175-258 (413)
76 TIGR02461 osmo_MPG_phos mannos 98.1 9.6E-06 2.1E-10 75.9 7.6 43 126-168 13-55 (225)
77 PRK13288 pyrophosphatase PpaX; 98.0 2.5E-05 5.5E-10 72.0 9.8 124 128-272 82-210 (214)
78 PRK13223 phosphoglycolate phos 98.0 2.7E-05 5.9E-10 74.9 10.2 125 127-272 100-229 (272)
79 KOG4383 Uncharacterized conser 98.0 3.2E-05 7E-10 80.1 10.6 191 115-305 813-1110(1354)
80 TIGR01449 PGP_bact 2-phosphogl 98.0 2.9E-05 6.3E-10 71.3 9.3 122 128-270 85-211 (213)
81 TIGR02463 MPGP_rel mannosyl-3- 98.0 3.2E-05 7E-10 71.7 9.2 39 130-168 18-56 (221)
82 PRK10187 trehalose-6-phosphate 98.0 2.8E-05 6E-10 74.6 9.0 140 128-273 36-241 (266)
83 PRK13226 phosphoglycolate phos 98.0 4.8E-05 1E-09 71.2 10.3 125 128-273 95-225 (229)
84 TIGR03351 PhnX-like phosphonat 97.9 7.8E-05 1.7E-09 69.0 10.1 125 127-271 86-218 (220)
85 PRK12702 mannosyl-3-phosphogly 97.9 8.7E-05 1.9E-09 71.3 10.1 42 127-168 17-58 (302)
86 PRK08238 hypothetical protein; 97.9 0.00017 3.6E-09 74.8 12.8 98 128-250 72-169 (479)
87 PRK10826 2-deoxyglucose-6-phos 97.9 6.4E-05 1.4E-09 69.8 8.8 122 127-269 91-216 (222)
88 TIGR01422 phosphonatase phosph 97.8 0.00016 3.4E-09 68.6 11.2 97 128-242 99-196 (253)
89 PRK13478 phosphonoacetaldehyde 97.8 0.00027 5.9E-09 67.7 12.2 97 128-242 101-198 (267)
90 PRK13225 phosphoglycolate phos 97.7 0.0004 8.7E-09 66.9 12.0 121 128-272 142-267 (273)
91 PLN02770 haloacid dehalogenase 97.7 0.00032 6.9E-09 66.5 10.8 116 128-262 108-227 (248)
92 PLN03243 haloacid dehalogenase 97.7 0.00033 7.2E-09 67.0 10.3 121 128-269 109-231 (260)
93 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00066 1.4E-08 65.1 12.3 135 127-273 120-274 (277)
94 PRK11590 hypothetical protein; 97.6 0.00036 7.8E-09 64.5 9.4 107 128-248 95-204 (211)
95 TIGR01484 HAD-SF-IIB HAD-super 97.5 0.00018 3.8E-09 65.8 6.3 39 128-166 17-55 (204)
96 TIGR01545 YfhB_g-proteo haloac 97.5 0.00042 9E-09 64.1 8.6 107 128-247 94-202 (210)
97 PRK11587 putative phosphatase; 97.5 0.00067 1.5E-08 62.8 9.8 115 128-262 83-199 (218)
98 TIGR02253 CTE7 HAD superfamily 97.5 0.00045 9.8E-09 63.8 8.5 100 128-246 94-195 (221)
99 PRK14502 bifunctional mannosyl 97.5 0.00046 1E-08 73.3 9.1 40 129-168 434-473 (694)
100 TIGR01548 HAD-SF-IA-hyp1 haloa 97.4 0.00034 7.4E-09 63.7 6.8 94 126-239 104-197 (197)
101 PRK06698 bifunctional 5'-methy 97.4 0.00082 1.8E-08 69.6 10.3 123 128-274 330-455 (459)
102 PLN02779 haloacid dehalogenase 97.3 0.0009 1.9E-08 64.9 8.8 118 128-262 144-264 (286)
103 PF05116 S6PP: Sucrose-6F-phos 97.3 0.00063 1.4E-08 64.5 7.4 68 207-274 164-244 (247)
104 PRK14501 putative bifunctional 97.3 0.0014 3E-08 71.8 10.8 61 207-273 656-721 (726)
105 PHA02530 pseT polynucleotide k 97.3 0.0012 2.6E-08 64.2 9.1 108 124-242 183-291 (300)
106 TIGR01428 HAD_type_II 2-haloal 97.3 0.00099 2.1E-08 60.5 7.9 96 128-242 92-187 (198)
107 PLN02575 haloacid dehalogenase 97.3 0.0021 4.5E-08 64.6 10.8 121 127-268 215-337 (381)
108 PRK08942 D,D-heptose 1,7-bisph 97.2 0.0026 5.6E-08 57.2 9.8 128 128-273 29-177 (181)
109 PRK14988 GMP/IMP nucleotidase; 97.2 0.001 2.2E-08 62.1 7.2 102 127-247 92-195 (224)
110 PF13419 HAD_2: Haloacid dehal 97.2 0.00048 1E-08 60.2 4.5 98 126-242 75-172 (176)
111 TIGR02254 YjjG/YfnB HAD superf 97.1 0.0018 4E-08 59.6 8.1 121 128-270 97-222 (224)
112 TIGR01672 AphA HAD superfamily 97.1 0.001 2.3E-08 62.6 6.2 89 128-242 114-206 (237)
113 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.0019 4.1E-08 54.7 6.9 93 127-242 24-126 (132)
114 TIGR01990 bPGM beta-phosphoglu 97.0 0.0011 2.4E-08 59.2 5.6 94 128-242 87-180 (185)
115 PRK11009 aphA acid phosphatase 97.0 0.0017 3.6E-08 61.2 6.5 92 128-245 114-210 (237)
116 TIGR01509 HAD-SF-IA-v3 haloaci 97.0 0.003 6.5E-08 56.1 7.9 95 128-242 85-179 (183)
117 COG4030 Uncharacterized protei 97.0 0.014 3.1E-07 53.6 12.0 146 128-274 83-263 (315)
118 PRK06769 hypothetical protein; 97.0 0.0026 5.6E-08 56.9 7.3 96 129-242 29-132 (173)
119 PTZ00174 phosphomannomutase; P 96.9 0.00078 1.7E-08 63.8 3.7 58 203-260 181-245 (247)
120 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.0018 3.9E-08 57.8 5.8 94 128-242 88-181 (185)
121 PLN02940 riboflavin kinase 96.9 0.0032 6.9E-08 63.6 8.1 116 128-262 93-212 (382)
122 PRK09449 dUMP phosphatase; Pro 96.9 0.0045 9.7E-08 57.3 8.4 123 128-272 95-222 (224)
123 COG4359 Uncharacterized conser 96.7 0.0028 6E-08 56.4 5.3 112 128-245 73-184 (220)
124 smart00775 LNS2 LNS2 domain. T 96.6 0.018 4E-07 50.7 10.2 105 126-242 25-141 (157)
125 TIGR01261 hisB_Nterm histidino 96.6 0.0045 9.7E-08 54.8 5.7 97 128-244 29-144 (161)
126 PLN02811 hydrolase 96.5 0.0076 1.7E-07 55.8 7.4 98 128-242 78-179 (220)
127 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.012 2.6E-07 52.6 8.4 128 129-268 27-174 (176)
128 TIGR01656 Histidinol-ppas hist 96.5 0.0052 1.1E-07 53.3 5.8 99 128-242 27-140 (147)
129 TIGR02252 DREG-2 REG-2-like, H 96.5 0.0073 1.6E-07 55.0 6.8 95 128-242 105-200 (203)
130 TIGR01549 HAD-SF-IA-v1 haloaci 96.4 0.0064 1.4E-07 52.7 5.8 93 126-240 62-154 (154)
131 TIGR01685 MDP-1 magnesium-depe 96.4 0.014 3.1E-07 52.2 7.7 112 118-245 35-155 (174)
132 TIGR01668 YqeG_hyp_ppase HAD s 96.3 0.011 2.3E-07 52.7 6.7 88 127-242 42-131 (170)
133 PF06888 Put_Phosphatase: Puta 96.1 0.014 3E-07 54.8 6.6 105 128-236 71-186 (234)
134 smart00577 CPDc catalytic doma 96.0 0.0081 1.8E-07 52.2 4.1 97 126-244 43-139 (148)
135 PLN02919 haloacid dehalogenase 95.9 0.043 9.4E-07 62.5 10.5 130 128-275 161-294 (1057)
136 TIGR01533 lipo_e_P4 5'-nucleot 95.9 0.028 6.2E-07 53.8 7.6 87 126-237 116-205 (266)
137 PRK10563 6-phosphogluconate ph 95.9 0.0086 1.9E-07 55.3 4.0 97 127-244 87-183 (221)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.7 0.11 2.5E-06 48.8 11.0 48 121-168 17-66 (242)
139 TIGR00685 T6PP trehalose-phosp 95.6 0.016 3.6E-07 54.7 5.0 65 204-272 163-239 (244)
140 TIGR01681 HAD-SF-IIIC HAD-supe 95.6 0.046 1E-06 46.3 7.1 93 128-238 29-126 (128)
141 COG3769 Predicted hydrolase (H 95.6 0.1 2.2E-06 48.0 9.4 37 132-168 27-63 (274)
142 TIGR01691 enolase-ppase 2,3-di 95.5 0.043 9.4E-07 51.1 7.3 100 125-245 92-194 (220)
143 PRK05446 imidazole glycerol-ph 95.5 0.034 7.3E-07 55.5 6.8 101 127-243 29-144 (354)
144 TIGR01664 DNA-3'-Pase DNA 3'-p 95.4 0.054 1.2E-06 48.1 7.1 94 129-243 43-158 (166)
145 TIGR01675 plant-AP plant acid 95.2 0.064 1.4E-06 50.1 7.3 89 126-234 118-210 (229)
146 TIGR02247 HAD-1A3-hyp Epoxide 95.2 0.02 4.2E-07 52.5 3.8 97 127-242 93-191 (211)
147 PLN02205 alpha,alpha-trehalose 95.1 0.19 4.1E-06 56.0 11.9 37 128-164 616-653 (854)
148 COG2179 Predicted hydrolase of 95.1 0.15 3.2E-06 44.9 8.7 108 86-241 19-132 (175)
149 TIGR01686 FkbH FkbH-like domai 95.0 0.068 1.5E-06 52.6 7.1 95 128-246 31-129 (320)
150 PRK09456 ?-D-glucose-1-phospha 94.4 0.077 1.7E-06 48.2 5.6 96 128-242 84-180 (199)
151 PLN02580 trehalose-phosphatase 94.3 0.095 2.1E-06 52.8 6.2 68 203-274 293-375 (384)
152 PRK10725 fructose-1-P/6-phosph 93.9 0.14 3E-06 45.7 6.1 93 129-242 89-181 (188)
153 TIGR01993 Pyr-5-nucltdase pyri 93.8 0.099 2.2E-06 46.7 5.0 97 128-242 84-180 (184)
154 PLN03017 trehalose-phosphatase 93.8 0.4 8.7E-06 47.9 9.6 63 207-273 282-356 (366)
155 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.6 0.35 7.5E-06 45.8 8.6 48 121-168 10-60 (249)
156 KOG3120 Predicted haloacid deh 93.4 0.42 9.2E-06 44.0 8.2 111 128-246 84-209 (256)
157 PLN02645 phosphoglycolate phos 92.6 0.32 7E-06 47.6 7.0 47 121-167 37-86 (311)
158 PHA02597 30.2 hypothetical pro 91.5 0.45 9.8E-06 42.9 6.0 90 128-243 74-170 (197)
159 COG0637 Predicted phosphatase/ 91.4 0.64 1.4E-05 43.2 7.0 97 127-242 85-181 (221)
160 PF09419 PGP_phosphatase: Mito 91.0 0.87 1.9E-05 40.5 7.2 107 90-240 36-157 (168)
161 PLN02423 phosphomannomutase 90.9 0.37 8.1E-06 45.5 5.0 43 207-250 188-235 (245)
162 PRK10748 flavin mononucleotide 90.3 0.79 1.7E-05 42.9 6.6 92 128-244 113-205 (238)
163 PF13344 Hydrolase_6: Haloacid 90.1 0.16 3.4E-06 41.2 1.5 48 121-168 7-57 (101)
164 PF03767 Acid_phosphat_B: HAD 89.4 0.58 1.2E-05 43.9 4.9 90 127-235 114-207 (229)
165 PLN02177 glycerol-3-phosphate 87.8 5.9 0.00013 41.5 11.6 100 129-247 111-215 (497)
166 COG1011 Predicted hydrolase (H 87.3 2.3 5E-05 38.9 7.5 125 126-272 97-226 (229)
167 TIGR01493 HAD-SF-IA-v2 Haloaci 87.3 0.67 1.4E-05 40.8 3.7 85 128-238 90-174 (175)
168 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.8 0.99 2.1E-05 42.9 4.8 125 130-272 122-254 (257)
169 TIGR01680 Veg_Stor_Prot vegeta 86.2 3.5 7.6E-05 39.6 8.0 89 126-233 143-235 (275)
170 PRK10444 UMP phosphatase; Prov 86.0 0.81 1.7E-05 43.4 3.7 45 121-165 10-54 (248)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 85.7 1 2.2E-05 42.9 4.3 48 121-168 10-64 (257)
172 PF08235 LNS2: LNS2 (Lipin/Ned 84.7 9 0.00019 33.7 9.3 102 127-242 26-141 (157)
173 TIGR01684 viral_ppase viral ph 83.5 1.8 3.9E-05 41.9 4.9 41 129-169 146-187 (301)
174 TIGR01663 PNK-3'Pase polynucle 83.4 2.9 6.3E-05 44.0 6.8 39 129-167 198-248 (526)
175 COG0241 HisB Histidinol phosph 83.2 1.8 3.8E-05 39.0 4.4 103 129-242 32-144 (181)
176 PTZ00174 phosphomannomutase; P 80.4 2.4 5.1E-05 40.0 4.4 35 128-162 22-56 (247)
177 PHA03398 viral phosphatase sup 80.4 2.9 6.3E-05 40.6 5.0 41 129-169 148-189 (303)
178 KOG3040 Predicted sugar phosph 78.2 4.6 0.0001 37.1 5.3 50 118-167 13-65 (262)
179 TIGR02251 HIF-SF_euk Dullard-l 77.7 2.1 4.5E-05 37.7 2.9 44 124-168 38-81 (162)
180 COG3700 AphA Acid phosphatase 77.4 4 8.7E-05 36.5 4.5 91 129-246 115-211 (237)
181 TIGR02244 HAD-IG-Ncltidse HAD 76.9 10 0.00022 37.7 7.9 38 129-166 185-223 (343)
182 TIGR01689 EcbF-BcbF capsule bi 76.4 2.8 6.1E-05 35.5 3.2 33 127-159 23-55 (126)
183 PF00689 Cation_ATPase_C: Cati 75.6 0.83 1.8E-05 40.7 -0.2 42 308-349 2-44 (182)
184 PF13242 Hydrolase_like: HAD-h 73.5 6.8 0.00015 29.4 4.5 58 205-262 6-71 (75)
185 PF05822 UMPH-1: Pyrimidine 5' 72.2 22 0.00049 33.6 8.4 134 127-272 89-241 (246)
186 TIGR01452 PGP_euk phosphoglyco 72.1 4.1 8.9E-05 39.1 3.7 48 121-168 11-61 (279)
187 COG0647 NagD Predicted sugar p 71.4 4.8 0.0001 38.7 3.8 46 120-165 16-61 (269)
188 PRK14194 bifunctional 5,10-met 69.9 29 0.00064 33.9 9.0 65 200-264 137-211 (301)
189 TIGR01459 HAD-SF-IIA-hyp4 HAD- 62.5 6.2 0.00013 36.9 2.7 95 130-242 140-236 (242)
190 KOG2914 Predicted haloacid-hal 61.0 36 0.00077 31.7 7.4 116 129-260 93-212 (222)
191 PLN02151 trehalose-phosphatase 61.0 20 0.00044 35.8 6.1 62 208-273 269-342 (354)
192 COG1877 OtsB Trehalose-6-phosp 59.9 43 0.00094 32.1 7.9 52 116-167 28-80 (266)
193 TIGR01456 CECR5 HAD-superfamil 59.5 42 0.00092 32.9 8.1 48 121-168 9-64 (321)
194 PRK14179 bifunctional 5,10-met 58.2 74 0.0016 30.8 9.3 63 200-262 136-208 (284)
195 TIGR01460 HAD-SF-IIA Haloacid 56.0 22 0.00047 33.2 5.2 47 121-167 7-57 (236)
196 PF12689 Acid_PPase: Acid Phos 55.8 20 0.00043 31.9 4.6 41 128-168 45-86 (169)
197 PF13380 CoA_binding_2: CoA bi 55.5 13 0.00029 30.7 3.2 79 85-167 18-103 (116)
198 TIGR02250 FCP1_euk FCP1-like p 55.0 23 0.0005 30.9 4.8 45 124-169 54-98 (156)
199 PTZ00445 p36-lilke protein; Pr 54.7 29 0.00063 32.1 5.5 73 79-156 27-103 (219)
200 PF00389 2-Hacid_dh: D-isomer 52.8 1.3E+02 0.0029 24.9 10.9 36 210-246 52-89 (133)
201 KOG3085 Predicted hydrolase (H 51.7 40 0.00086 31.8 6.1 105 129-254 114-221 (237)
202 COG2503 Predicted secreted aci 51.2 70 0.0015 30.3 7.4 87 128-239 122-212 (274)
203 PF02358 Trehalose_PPase: Treh 50.0 20 0.00044 33.3 3.9 57 207-263 164-234 (235)
204 PRK14169 bifunctional 5,10-met 48.2 1.3E+02 0.0029 29.1 9.2 63 200-262 134-206 (282)
205 TIGR01452 PGP_euk phosphoglyco 46.2 68 0.0015 30.6 7.0 40 203-242 202-242 (279)
206 PRK14184 bifunctional 5,10-met 44.9 1.4E+02 0.003 29.0 8.8 63 200-262 135-211 (286)
207 COG0279 GmhA Phosphoheptose is 44.9 49 0.0011 29.4 5.1 59 76-158 92-150 (176)
208 TIGR02471 sucr_syn_bact_C sucr 44.3 16 0.00034 33.9 2.2 35 133-168 20-54 (236)
209 PRK14189 bifunctional 5,10-met 43.6 1.3E+02 0.0028 29.2 8.3 65 199-263 135-209 (285)
210 PRK14172 bifunctional 5,10-met 43.1 2E+02 0.0043 27.8 9.5 63 200-262 136-208 (278)
211 PRK14170 bifunctional 5,10-met 43.1 2E+02 0.0043 27.9 9.5 63 200-262 135-207 (284)
212 PLN02645 phosphoglycolate phos 42.9 49 0.0011 32.2 5.6 60 211-272 238-307 (311)
213 PRK14174 bifunctional 5,10-met 42.8 1.2E+02 0.0027 29.5 8.1 63 200-262 137-213 (295)
214 PRK14166 bifunctional 5,10-met 41.5 1.3E+02 0.0028 29.2 8.0 63 200-262 135-207 (282)
215 cd02067 B12-binding B12 bindin 40.5 31 0.00067 28.2 3.2 79 89-168 22-104 (119)
216 CHL00200 trpA tryptophan synth 39.4 2E+02 0.0044 27.4 9.0 46 122-167 96-145 (263)
217 KOG2882 p-Nitrophenyl phosphat 37.8 56 0.0012 31.8 4.8 48 121-168 31-81 (306)
218 PRK00208 thiG thiazole synthas 37.7 2.2E+02 0.0048 27.0 8.7 52 113-164 89-143 (250)
219 PLN02423 phosphomannomutase 37.4 47 0.001 31.2 4.3 31 128-159 24-54 (245)
220 KOG3109 Haloacid dehalogenase- 36.8 1.4E+02 0.003 27.9 6.9 108 119-242 90-200 (244)
221 PF06506 PrpR_N: Propionate ca 35.0 1.6E+02 0.0036 25.9 7.2 67 201-284 106-172 (176)
222 cd00860 ThrRS_anticodon ThrRS 34.4 94 0.002 23.5 5.0 46 122-167 6-52 (91)
223 COG4996 Predicted phosphatase 34.3 79 0.0017 27.1 4.5 57 112-168 19-81 (164)
224 PLN02591 tryptophan synthase 33.9 2E+02 0.0044 27.2 7.9 42 206-247 174-219 (250)
225 cd04728 ThiG Thiazole synthase 33.9 1.2E+02 0.0026 28.8 6.2 51 114-164 90-143 (248)
226 cd05017 SIS_PGI_PMI_1 The memb 33.9 65 0.0014 26.3 4.2 37 129-167 55-91 (119)
227 PRK13670 hypothetical protein; 33.7 1.9E+02 0.0041 29.4 8.1 98 117-238 1-112 (388)
228 cd02071 MM_CoA_mut_B12_BD meth 33.6 49 0.0011 27.4 3.4 79 89-168 22-104 (122)
229 TIGR03849 arch_ComA phosphosul 33.0 1.2E+02 0.0025 28.7 6.0 67 132-225 42-118 (237)
230 PF14336 DUF4392: Domain of un 31.7 1.1E+02 0.0023 29.8 5.8 37 131-167 63-100 (291)
231 TIGR01501 MthylAspMutase methy 31.0 1.3E+02 0.0027 25.7 5.5 80 89-168 24-112 (134)
232 PF08645 PNK3P: Polynucleotide 30.9 37 0.00079 29.7 2.2 24 129-152 30-53 (159)
233 cd04906 ACT_ThrD-I_1 First of 30.7 58 0.0013 25.0 3.1 35 121-155 42-77 (85)
234 PRK14178 bifunctional 5,10-met 30.6 2.4E+02 0.0052 27.3 7.9 64 199-262 129-202 (279)
235 COG1832 Predicted CoA-binding 30.0 95 0.0021 26.7 4.4 36 117-152 16-51 (140)
236 cd05014 SIS_Kpsf KpsF-like pro 29.6 49 0.0011 27.1 2.7 28 129-156 59-86 (128)
237 PF06941 NT5C: 5' nucleotidase 28.6 42 0.0009 30.0 2.3 28 128-155 73-100 (191)
238 PF03129 HGTP_anticodon: Antic 28.5 1E+02 0.0022 23.7 4.2 48 120-167 2-53 (94)
239 PLN02897 tetrahydrofolate dehy 27.5 5E+02 0.011 26.0 9.6 63 200-262 192-264 (345)
240 PRK11840 bifunctional sulfur c 26.8 1.6E+02 0.0035 29.1 6.0 52 113-164 163-217 (326)
241 cd04724 Tryptophan_synthase_al 26.5 1.5E+02 0.0032 27.8 5.7 24 210-233 176-199 (242)
242 TIGR00612 ispG_gcpE 1-hydroxy- 25.9 2.4E+02 0.0053 28.0 7.0 144 83-248 153-318 (346)
243 cd00859 HisRS_anticodon HisRS 25.8 1.4E+02 0.0029 22.1 4.5 46 122-167 6-52 (91)
244 PRK09529 bifunctional acetyl-C 25.2 2.3E+02 0.005 30.8 7.2 140 131-278 149-294 (711)
245 PF02679 ComA: (2R)-phospho-3- 25.1 1.6E+02 0.0034 27.9 5.4 110 130-268 53-173 (244)
246 COG4229 Predicted enolase-phos 24.9 1.9E+02 0.0041 26.3 5.6 93 125-241 100-198 (229)
247 cd05008 SIS_GlmS_GlmD_1 SIS (S 24.3 61 0.0013 26.4 2.3 27 130-156 59-85 (126)
248 PRK14167 bifunctional 5,10-met 23.6 1.8E+02 0.004 28.3 5.8 63 200-262 135-211 (297)
249 PF02401 LYTB: LytB protein; 23.6 2.3E+02 0.0049 27.5 6.4 164 55-249 63-266 (281)
250 PLN02616 tetrahydrofolate dehy 23.6 5.9E+02 0.013 25.6 9.4 64 199-262 208-281 (364)
251 PF12017 Tnp_P_element: Transp 23.3 1.1E+02 0.0024 28.8 4.1 48 122-169 186-234 (236)
252 cd06919 Asp_decarbox Aspartate 23.1 2.1E+02 0.0045 23.6 5.0 71 13-109 26-96 (111)
253 PF02219 MTHFR: Methylenetetra 23.0 90 0.002 30.0 3.6 42 115-156 69-111 (287)
254 PRK10444 UMP phosphatase; Prov 22.9 85 0.0018 29.6 3.3 40 203-242 174-214 (248)
255 cd01019 ZnuA Zinc binding prot 22.9 2.4E+02 0.0053 27.0 6.6 53 115-167 196-252 (286)
256 TIGR00262 trpA tryptophan synt 22.7 5.2E+02 0.011 24.4 8.7 24 209-232 186-209 (256)
257 PF05240 APOBEC_C: APOBEC-like 22.5 81 0.0018 22.6 2.3 24 131-154 2-25 (55)
258 cd05013 SIS_RpiR RpiR-like pro 22.4 1.7E+02 0.0036 23.7 4.8 26 131-156 74-99 (139)
259 cd04886 ACT_ThrD-II-like C-ter 21.7 2.8E+02 0.0062 19.3 5.4 62 82-148 11-72 (73)
260 PRK14175 bifunctional 5,10-met 21.5 1.9E+02 0.0041 28.0 5.4 63 200-262 136-208 (286)
261 PRK14190 bifunctional 5,10-met 21.4 2.1E+02 0.0046 27.7 5.7 64 199-262 135-208 (284)
262 PLN02389 biotin synthase 21.1 6.3E+02 0.014 25.5 9.3 121 80-232 118-241 (379)
263 KOG1504 Ornithine carbamoyltra 21.1 1E+02 0.0022 29.5 3.2 38 209-246 177-218 (346)
264 cd02070 corrinoid_protein_B12- 21.0 61 0.0013 29.4 1.8 78 89-168 105-186 (201)
265 PF12407 Abdominal-A: Homeobox 20.9 66 0.0014 18.5 1.2 14 362-375 4-17 (24)
266 PRK13671 hypothetical protein; 20.8 5.5E+02 0.012 25.0 8.4 97 119-238 2-111 (298)
267 PRK00652 lpxK tetraacyldisacch 20.7 2.6E+02 0.0056 27.6 6.3 58 210-267 69-154 (325)
268 TIGR00129 fdhD_narQ formate de 20.5 1.7E+02 0.0038 27.4 4.8 34 134-167 182-215 (237)
269 PF13541 ChlI: Subunit ChlI of 20.5 1.2E+02 0.0025 25.4 3.3 40 113-152 78-119 (121)
270 PRK02261 methylaspartate mutas 20.4 1.5E+02 0.0033 25.2 4.1 78 89-167 26-113 (137)
271 PRK00724 formate dehydrogenase 20.2 1.8E+02 0.0039 27.8 4.9 34 134-167 211-244 (263)
272 cd05710 SIS_1 A subgroup of th 20.2 76 0.0016 26.0 2.1 28 129-156 59-86 (120)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-85 Score=651.21 Aligned_cols=399 Identities=74% Similarity=1.087 Sum_probs=374.7
Q ss_pred CcccccCCcCCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhH
Q 015327 1 MAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG 80 (409)
Q Consensus 1 ~a~~a~~~~~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~ 80 (409)
+|||||+.||+|+||+|++++|.||+++|.+|+++|++||||.+||++.+|.+++|+++..+||||++|+++|+.+.+++
T Consensus 365 ~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~ 444 (942)
T KOG0205|consen 365 TAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIP 444 (942)
T ss_pred HHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcch
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHH
Q 015327 81 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE 160 (409)
Q Consensus 81 ~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ 160 (409)
+.+++.+++|+++|+|.|++|++.++++..+..+.+|+|+|++.+.||||+++.++|.+....|+.|.|+|||....+++
T Consensus 445 ~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~ke 524 (942)
T KOG0205|consen 445 ERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE 524 (942)
T ss_pred HHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCC
Q 015327 161 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 240 (409)
Q Consensus 161 ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad 240 (409)
+++++|+.+|+||+..+.|.+.++.+...+.++++++++.|+.+.|+||+++|+.||+++|+|+|+|||+||+|+||.||
T Consensus 525 Tgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAd 604 (942)
T KOG0205|consen 525 TGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKAD 604 (942)
T ss_pred hhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hh---------------------------
Q 015327 241 IGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DG--------------------------- 292 (409)
Q Consensus 241 vGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~--------------------------- 292 (409)
+||++.+++++|+.+||+|+++++++.|..+++.+|.+|+||++|.+|++ .+
T Consensus 605 igiava~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliia 684 (942)
T KOG0205|consen 605 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIA 684 (942)
T ss_pred cceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999985 11
Q ss_pred ------------------------------------------------------------------------hHHHHHHH
Q 015327 293 ------------------------------------------------------------------------LSSTEFIQ 300 (409)
Q Consensus 293 ------------------------------------------------------------------------i~~~~~~~ 300 (409)
+++.+|++
T Consensus 685 ilnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylq 764 (942)
T KOG0205|consen 685 ILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQ 764 (942)
T ss_pred HhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhh
Confidence 11122222
Q ss_pred Hhh----------------------------------------------------------------hhhhccHHHHHHH
Q 015327 301 VLE----------------------------------------------------------------LNFLFTLDTVIAI 316 (409)
Q Consensus 301 ~~~----------------------------------------------------------------~~~~~pl~~~~~l 316 (409)
+++ +..++|++.+.+.
T Consensus 765 vsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~ 844 (942)
T KOG0205|consen 765 VSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFI 844 (942)
T ss_pred heehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhhee
Confidence 222 3456788777774
Q ss_pred ---------------HHHhccccccchhhhHhhhHHHhhhhhccCCCCCCccccccccccccchhHHHHHhhhhHHhhhh
Q 015327 317 ---------------LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRE 381 (409)
Q Consensus 317 ---------------~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~r~~~~~l~~ 381 (409)
....|++..+||.++++++|...||++|++|++++ +|+|++++|+|||||+|||||
T Consensus 845 ~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~~lq~~~~---------~~~~~~a~~~~~~ae~~r~~e 915 (942)
T KOG0205|consen 845 IRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEG---------RELSEIAEEAKRRAEIARLRE 915 (942)
T ss_pred hhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhcccCCCcc---------chhhHHHHHHhhhhhhhhccc
Confidence 34468888999999999999999999999999951 699999999999999999999
Q ss_pred hhcccchhhhhhhhcCCChhhhhccccC
Q 015327 382 LHTLKGHVESLIRLKGLDIDAIQQSYSV 409 (409)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (409)
+||||||||||+||||+|+++| |||||
T Consensus 916 ~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 916 LHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999999999999999999 99997
No 2
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-65 Score=561.95 Aligned_cols=344 Identities=29% Similarity=0.448 Sum_probs=299.2
Q ss_pred CCChhHHHHHhhcc------CchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhcc-------C
Q 015327 10 NLDVIDAAIVGMLA------DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------K 76 (409)
Q Consensus 10 ~~~~~d~ai~~~~~------~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~-------~ 76 (409)
.+||+|.|++.... +....+..+++++.+||||++||||++++..+|++++++|||||+|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 58999999998775 3344566778899999999999999999977777999999999999999973 4
Q ss_pred chhHHHHHHHHHHHHHccCcceeeeeeccCCCCc----CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCC
Q 015327 77 SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 152 (409)
Q Consensus 77 ~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~----~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTG 152 (409)
++.++.+.+..++|+++|||+|++|||.++..+. +..|++|+|+|+++++||||++++++|+.|+++||++||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667889999999999999999999998765544 578999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCC
Q 015327 153 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 232 (409)
Q Consensus 153 D~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 232 (409)
||..||++||++||+..+.....+++|.+++....+ ++.+.++++.+|||++|+||.+||+.+|+.|++|+|+|||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 999999999999998765444557888887654333 5667888889999999999999999999999999999999999
Q ss_pred HHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhh-h-hc
Q 015327 233 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN-F-LF 308 (409)
Q Consensus 233 ~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~-~-~~ 308 (409)
+||||+|||||||+ +|+++|+++||+++++++|..|..+|.+||++|.|+++++.|.+ .++...+++.++.++ . ++
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 69999999999999999999999999999999999999999999 665544444444333 2 47
Q ss_pred cHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCCCCcccccc
Q 015327 309 TLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVR 357 (409)
Q Consensus 309 pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 357 (409)
|+.+.|++ ++++++.+|.+.++.+++.++.|.++|.+ |+..+|+.+
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~---p~~~i~~~~ 777 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRG---PEEGLFNRK 777 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCC---ccccccchh
Confidence 99999999 99999999999999888899999998543 433356533
No 3
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-63 Score=512.96 Aligned_cols=339 Identities=26% Similarity=0.388 Sum_probs=295.4
Q ss_pred CCChhHHHHHhhcc-----Cch---h-----------hhcCceEEEEecCCCCCceEEEEEEeCCCe--EEEEEcCCHHH
Q 015327 10 NLDVIDAAIVGMLA-----DPK---E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK--MHRVTKGSPEQ 68 (409)
Q Consensus 10 ~~~~~d~ai~~~~~-----~~~---~-----------~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~--~~~~~KGa~e~ 68 (409)
-|.|+|.|+.-... +.. . ....++.+..+||++++|+||+.+.++.++ +.+|+|||+|.
T Consensus 422 ~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~ 501 (972)
T KOG0202|consen 422 VGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPES 501 (972)
T ss_pred cCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHH
Confidence 57899999964332 211 1 233456668999999999999999876554 78999999999
Q ss_pred HHHhhcc------------CchhHHHHHHHHHHHHHccCcceeeeeeccCCC-----------CcCCCCCCceEEEEEec
Q 015327 69 ILNLLHN------------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-----------SKESSGSPWQFIGLIPL 125 (409)
Q Consensus 69 il~~c~~------------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~-----------~~~~~e~~l~~lG~i~l 125 (409)
|+++|+. ++..++.+.+...+|+++|||||++|+++.+.. .+...|++|+|+|++++
T Consensus 502 Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi 581 (972)
T KOG0202|consen 502 VLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGI 581 (972)
T ss_pred HHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeec
Confidence 9999952 345678899999999999999999999977631 24567899999999999
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC--CCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
.||||++++++|+.|+++||+|+|+|||+..||++||+++|+..+.. ....+.|.+++. +...+.++....+.+|+|
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~~~~~~~~~~vFaR 660 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEELDDAVRRVLVFAR 660 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHHHHHHhhcceEEEe
Confidence 99999999999999999999999999999999999999999965443 456778887774 444456677888889999
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHH
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 282 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i 282 (409)
++|.||.+||+.||+.|++|+|+|||+||+||||.|||||||| +|+++||+|||+||.||||++|+.+|++||.+|.||
T Consensus 661 ~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNi 740 (972)
T KOG0202|consen 661 AEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNI 740 (972)
T ss_pred cCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hhhHHHHHHHHhhhhh-hccHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 283 RNYMVRGI-DGLSSTEFIQVLELNF-LFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 283 ~~~~~~~~-~~i~~~~~~~~~~~~~-~~pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
++|+.|.+ .++..+.+++++..+. -.||+++|+| .|+++..+|.-+++.+++..++|.||||....|
T Consensus 741 k~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~ 810 (972)
T KOG0202|consen 741 KNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDG 810 (972)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCC
Confidence 99999999 7777666666665553 5899999999 899999999999999999999999999988776
No 4
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-63 Score=512.01 Aligned_cols=338 Identities=22% Similarity=0.322 Sum_probs=302.8
Q ss_pred CChhHHHHHhhcc----CchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhcc-----------
Q 015327 11 LDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------- 75 (409)
Q Consensus 11 ~~~~d~ai~~~~~----~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~----------- 75 (409)
|+|+++|+|++.- |....|.+.++++++||||++|+|+++++.+++..++|+|||+|.|+..|..
T Consensus 507 GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~ 586 (1034)
T KOG0204|consen 507 GSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPF 586 (1034)
T ss_pred CCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeC
Confidence 7999999998642 6667789999999999999999999999988777339999999999999972
Q ss_pred CchhHHHHHHHHHHHHHccCcceeeeeeccCCC-------C-cCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcE
Q 015327 76 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-------S-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 147 (409)
Q Consensus 76 ~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~-------~-~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v 147 (409)
+++.+..+++.|+.|+++|||++|+||+++... + .+.++.+++++|+++++||+|||++++|+.|+++||.|
T Consensus 587 ~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItV 666 (1034)
T KOG0204|consen 587 NEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITV 666 (1034)
T ss_pred CHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEE
Confidence 455566899999999999999999999985433 1 13467899999999999999999999999999999999
Q ss_pred EEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEc
Q 015327 148 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 227 (409)
Q Consensus 148 ~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iG 227 (409)
.|+||||..||++||.+|||.++...-..++|.++. .+.+.+.++++.+..++||.+|.+|+-+|+.|+++|++|+.+|
T Consensus 667 RMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTG 745 (1034)
T KOG0204|consen 667 RMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTG 745 (1034)
T ss_pred EEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEec
Confidence 999999999999999999998877667888999887 4556667888999999999999999999999999999999999
Q ss_pred CCcCCHHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHH-HHHHHhhh
Q 015327 228 NGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSST-EFIQVLEL 304 (409)
Q Consensus 228 DG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~-~~~~~~~~ 304 (409)
||.||+|||++||||+||| .|+++||++||||++||||++|+++++|||+.|.||+||++|.+ -++... +-+...+.
T Consensus 746 DGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~ 825 (1034)
T KOG0204|consen 746 DGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACA 825 (1034)
T ss_pred CCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhh
Confidence 9999999999999999999 89999999999999999999999999999999999999999999 443333 33333444
Q ss_pred hhhccHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 305 NFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 305 ~~~~pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
..-.||..+|+| .|+++..+-.+.++++++..++|.|.|+|...|
T Consensus 826 ~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~ 871 (1034)
T KOG0204|consen 826 TGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKP 871 (1034)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCc
Confidence 556999999999 999999999999999999999999999999988
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=9e-60 Score=520.99 Aligned_cols=319 Identities=26% Similarity=0.405 Sum_probs=275.4
Q ss_pred cCceEEEEecCCCCCceEEEEEEeCCC-eEEEEEcCCHHHHHHhhcc------------CchhHHHHHHHHHHHHHccCc
Q 015327 30 ADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINKFAERGLR 96 (409)
Q Consensus 30 ~~~~~l~~~pF~s~~kr~sv~v~~~~g-~~~~~~KGa~e~il~~c~~------------~~~~~~~~~~~i~~~a~~GlR 96 (409)
.+|++++.+||||++|||+++++++++ .+++|+|||||.|+++|+. +++.++.+.+.+++|+++|+|
T Consensus 523 ~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlR 602 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLR 602 (1053)
T ss_pred cccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCe
Confidence 457899999999999999999987644 4789999999999999962 223467788899999999999
Q ss_pred ceeeeeeccCCCC------------cCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHH
Q 015327 97 SLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 97 ~l~~a~~~~~~~~------------~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 164 (409)
||++||+.++.++ ++..|++|+|+|+++++||||++++++|+.|+++||+|||+|||+..||.++|++
T Consensus 603 vLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~ 682 (1053)
T TIGR01523 603 VLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE 682 (1053)
T ss_pred EEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 9999999886532 2346899999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCC--------CCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHH
Q 015327 165 LGMGTNM--------YPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 236 (409)
Q Consensus 165 lgi~~~~--------~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aL 236 (409)
+||.... ....++.|.+++. +.+.++.+++..+.+|||++|+||.++|+.+|+.|++|+|+|||+||+|||
T Consensus 683 ~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaL 761 (1053)
T TIGR01523 683 VGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSL 761 (1053)
T ss_pred cCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHH
Confidence 9996431 1235677776653 333345667777889999999999999999999999999999999999999
Q ss_pred hhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhh------hhc
Q 015327 237 KKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN------FLF 308 (409)
Q Consensus 237 k~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~------~~~ 308 (409)
+.|||||||| ++++.|+++||+++++++|..|.++|.+||++|+|+++++.|.+ .++..++.+.+..++ ..+
T Consensus 762 k~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~ 841 (1053)
T TIGR01523 762 KMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVF 841 (1053)
T ss_pred HhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcC
Confidence 9999999998 89999999999999999999999999999999999999999999 555555444444443 247
Q ss_pred cHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 309 TLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 309 pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
|+++++++ ++++++.+|.++++.+++..++|+|+|+....+
T Consensus 842 Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~ 883 (1053)
T TIGR01523 842 PLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVG 883 (1053)
T ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCcc
Confidence 99999999 788899999999999999999999999865444
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.9e-58 Score=501.86 Aligned_cols=329 Identities=26% Similarity=0.408 Sum_probs=282.8
Q ss_pred CCChhHHHHHhhccCc--hhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhcc----------Cc
Q 015327 10 NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KS 77 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~--~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~----------~~ 77 (409)
.+||+|.|++...... ...+..++.++.+||||.+|+|++++.+.++.+++++||+||.|+++|+. ++
T Consensus 417 ~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 496 (902)
T PRK10517 417 LKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDD 496 (902)
T ss_pred CCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCH
Confidence 5799999999876532 22356788899999999999999998877777889999999999999963 23
Q ss_pred hhHHHHHHHHHHHHHccCcceeeeeeccCCCCcC---CCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCc
Q 015327 78 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ 154 (409)
Q Consensus 78 ~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~---~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~ 154 (409)
+..+.+.+.+++++++|+|++++||++++..+.+ ..|++++|+|+++|+|||||+++++|+.|+++||+|+|+|||+
T Consensus 497 ~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 497 IMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 3456677888999999999999999987643321 2378999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHH
Q 015327 155 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAP 234 (409)
Q Consensus 155 ~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~ 234 (409)
..||.++|+++||.. ..++.|.+++. +.+.++.+.++++.+|||++|+||.++|+.+|++|++|+|+|||+||+|
T Consensus 577 ~~tA~~IA~~lGI~~----~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaP 651 (902)
T PRK10517 577 ELVAAKVCHEVGLDA----GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAP 651 (902)
T ss_pred HHHHHHHHHHcCCCc----cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHH
Confidence 999999999999952 35677776653 4445567788889999999999999999999999999999999999999
Q ss_pred HHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhh-hhhccHHH
Q 015327 235 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLEL-NFLFTLDT 312 (409)
Q Consensus 235 aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~-~~~~pl~~ 312 (409)
||++|||||||++|+|+|+++||+|+++++|..|+++|++||++|+||++++.|.+ .++..++.+.++.+ ..++|+.+
T Consensus 652 ALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~ 731 (902)
T PRK10517 652 ALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLP 731 (902)
T ss_pred HHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999 55444443333333 34589999
Q ss_pred HHHH-HHHhccccccchhhhHhhhHHHhhhhhc
Q 015327 313 VIAI-LQTAFTSKKDFGKEERELLWAHAQRTLH 344 (409)
Q Consensus 313 ~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 344 (409)
++++ .+++.. .|.++++.++...+.|++||+
T Consensus 732 ~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r 763 (902)
T PRK10517 732 LHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR 763 (902)
T ss_pred HHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC
Confidence 9999 566555 889999999999999998876
No 7
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8.3e-58 Score=499.88 Aligned_cols=333 Identities=24% Similarity=0.393 Sum_probs=283.9
Q ss_pred CCChhHHHHHhhccCch--hhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhcc----------Cc
Q 015327 10 NLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KS 77 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~--~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~----------~~ 77 (409)
.+||+|.|++.+..... ..+..++.++.+||++.+|+|++++++.+|++++++|||||.|+++|+. ++
T Consensus 415 ~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 494 (903)
T PRK15122 415 MKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDE 494 (903)
T ss_pred CCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCH
Confidence 47999999998765321 2345688899999999999999999877788899999999999999963 23
Q ss_pred hhHHHHHHHHHHHHHccCcceeeeeeccCCCCc-----CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCC
Q 015327 78 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 152 (409)
Q Consensus 78 ~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-----~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTG 152 (409)
+.++.+.+.+++++++|+|++++||++++.++. +..|++++|+|+++++|||||+++++|+.|+++||+|+|+||
T Consensus 495 ~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTG 574 (903)
T PRK15122 495 ARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTG 574 (903)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECC
Confidence 345677888899999999999999998765432 235789999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCC
Q 015327 153 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 232 (409)
Q Consensus 153 D~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 232 (409)
|+..||.++|+++||.. ..++.|.+++. +.+.++.+.++++.+|||++|+||.++|+.||++|++|+|+|||+||
T Consensus 575 D~~~tA~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvND 649 (903)
T PRK15122 575 DNPIVTAKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGIND 649 (903)
T ss_pred CCHHHHHHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchh
Confidence 99999999999999953 35677777663 34445677888899999999999999999999999999999999999
Q ss_pred HHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHh-hhhhhccH
Q 015327 233 APALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVL-ELNFLFTL 310 (409)
Q Consensus 233 ~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~-~~~~~~pl 310 (409)
+|||++|||||||++|+|+|+++||+|+++++|+.|++++++||.+|+|+++++.|.+ .++..++...+. ++..++|+
T Consensus 650 aPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl 729 (903)
T PRK15122 650 APALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPM 729 (903)
T ss_pred HHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchh
Confidence 9999999999999999999999999999999999999999999999999999999999 444333332322 23355899
Q ss_pred HHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 311 DTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 311 ~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
.+++++ .+++.. .|.++++.+++..+.| |+|+....+
T Consensus 730 ~~~qil~~nli~D-~~~lal~~d~~~~~~m-~~P~~~~~~ 767 (903)
T PRK15122 730 LAIHLLLQNLMYD-ISQLSLPWDKMDKEFL-RKPRKWDAK 767 (903)
T ss_pred HHHHHHHHHHHHH-HHHHhhcCCCCCHhhc-CCCCCCChh
Confidence 999999 666666 5999999999999999 888655444
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9.8e-58 Score=503.39 Aligned_cols=334 Identities=24% Similarity=0.361 Sum_probs=288.0
Q ss_pred CCChhHHHHHhhcc----CchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccC---------
Q 015327 10 NLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK--------- 76 (409)
Q Consensus 10 ~~~~~d~ai~~~~~----~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~--------- 76 (409)
.+||+|.|++.++. +....+..++.++.+||+|++|||+++++.+++++++++|||||.|+++|+.-
T Consensus 444 ~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~ 523 (941)
T TIGR01517 444 IGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATP 523 (941)
T ss_pred CCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCccc
Confidence 37999999998764 33344567888899999999999999998777778999999999999999631
Q ss_pred -chhHHHHHHHHHHHHHccCcceeeeeeccCCCCc---CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCC
Q 015327 77 -SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 152 (409)
Q Consensus 77 -~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~---~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTG 152 (409)
.+.++.+.+.+++|+++|+|++++||++++.++. +..|++|+|+|+++++||||++++++|+.|+++||+++|+||
T Consensus 524 ~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTG 603 (941)
T TIGR01517 524 ISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTG 603 (941)
T ss_pred CcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECC
Confidence 0135678888999999999999999999864432 234789999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCC
Q 015327 153 DQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 232 (409)
Q Consensus 153 D~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND 232 (409)
|+..||.++|+++||..+ +..++.|.+++. +.+.++.+++.++.+|||++|+||.++|+.+|+.|++|+|+|||+||
T Consensus 604 D~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvND 680 (941)
T TIGR01517 604 DNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTND 680 (941)
T ss_pred CChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCch
Confidence 999999999999999753 235677776653 33345667788889999999999999999999999999999999999
Q ss_pred HHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhh-hhhhcc
Q 015327 233 APALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLE-LNFLFT 309 (409)
Q Consensus 233 ~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~-~~~~~p 309 (409)
+|||++|||||||| ++++.|+++||+++++++|+.|+++|++||++|+|+++++.|.+ .++..+++..++. +...+|
T Consensus 681 apALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~p 760 (941)
T TIGR01517 681 APALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSP 760 (941)
T ss_pred HHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999 89999999999999999999999999999999999999999999 5555444444433 335679
Q ss_pred HHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccC
Q 015327 310 LDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGL 346 (409)
Q Consensus 310 l~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 346 (409)
+++++++ ++++++.+|.+.++.+.+..+.|.++|...
T Consensus 761 l~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~ 798 (941)
T TIGR01517 761 LTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR 798 (941)
T ss_pred HHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC
Confidence 9999998 888899999999999999999999998643
No 9
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.3e-57 Score=494.31 Aligned_cols=329 Identities=22% Similarity=0.376 Sum_probs=281.2
Q ss_pred CCChhHHHHHhhccCc--hhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhcc----------Cc
Q 015327 10 NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KS 77 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~--~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~----------~~ 77 (409)
.+||+|.|++.++.+. ...+..++.++.+||||++|+|++++.+.++.+++++||+||.|+++|+. ++
T Consensus 382 ~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 461 (867)
T TIGR01524 382 WKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSE 461 (867)
T ss_pred CCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCH
Confidence 3699999999877532 23356788899999999999999998876666889999999999999963 23
Q ss_pred hhHHHHHHHHHHHHHccCcceeeeeeccCCCCc---CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCc
Q 015327 78 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ 154 (409)
Q Consensus 78 ~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~---~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~ 154 (409)
+.++.+.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|||+
T Consensus 462 ~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~ 541 (867)
T TIGR01524 462 SEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDN 541 (867)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 345678888999999999999999998865432 12478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHH
Q 015327 155 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAP 234 (409)
Q Consensus 155 ~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~ 234 (409)
..||.++|+++||.. ..++.|.+++. +.+.++.+.++++.+|||++|+||.++|+.+|++|++|+|+|||+||+|
T Consensus 542 ~~tA~aIA~~lGI~~----~~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDap 616 (867)
T TIGR01524 542 EIVTARICQEVGIDA----NDFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAP 616 (867)
T ss_pred HHHHHHHHHHcCCCC----CCeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHH
Confidence 999999999999963 24666766543 3334566778888999999999999999999999999999999999999
Q ss_pred HHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhh-hhhccHHH
Q 015327 235 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLEL-NFLFTLDT 312 (409)
Q Consensus 235 aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~-~~~~pl~~ 312 (409)
||++|||||||++|+++|+++||+|+++++|+.|+++|++||++|+|+++++.|.+ .++..++.+.+..+ ..++|+.+
T Consensus 617 ALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~ 696 (867)
T TIGR01524 617 ALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLS 696 (867)
T ss_pred HHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999 44444443333333 34589999
Q ss_pred HHHH-HHHhccccccchhhhHhhhHHHhhhhhc
Q 015327 313 VIAI-LQTAFTSKKDFGKEERELLWAHAQRTLH 344 (409)
Q Consensus 313 ~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 344 (409)
++++ .+++.. +|.++++.+++..+.|++||+
T Consensus 697 ~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~ 728 (867)
T TIGR01524 697 LHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ 728 (867)
T ss_pred HHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC
Confidence 9999 666666 799999999999999987665
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.6e-57 Score=501.66 Aligned_cols=336 Identities=24% Similarity=0.353 Sum_probs=283.3
Q ss_pred CCChhHHHHHhhcc----CchhhhcCceEEEEecCCCCCceEEEEEEeC---CCeEEEEEcCCHHHHHHhhcc-------
Q 015327 10 NLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN------- 75 (409)
Q Consensus 10 ~~~~~d~ai~~~~~----~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~---~g~~~~~~KGa~e~il~~c~~------- 75 (409)
.|||+|.|++.+.. +..+.+..++.++.+||||++|||++++... ++++++|+|||||.|+++|+.
T Consensus 422 ~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~ 501 (997)
T TIGR01106 422 AGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKE 501 (997)
T ss_pred CcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCc
Confidence 47999999998753 3445677899999999999999999887642 346889999999999999962
Q ss_pred ---CchhHHHHHHHHHHHHHccCcceeeeeeccCCCCc--------C---CCCCCceEEEEEeccCCCCcchHHHHHHHH
Q 015327 76 ---KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSAETIRRAL 141 (409)
Q Consensus 76 ---~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~--------~---~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~ 141 (409)
+++.++.+.+.+++|+++|+|||++||++++.++. + ..|++|+|+|+++++||||++++++|++|+
T Consensus 502 ~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~ 581 (997)
T TIGR01106 502 QPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCR 581 (997)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHH
Confidence 23456778899999999999999999998864321 1 137899999999999999999999999999
Q ss_pred hCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCcchhhhhhcCChhHHhhhcc
Q 015327 142 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKAD 199 (409)
Q Consensus 142 ~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~----------------------~~~l~g~~~~~~~~~~~~~~~~~~~~ 199 (409)
++||+|+|+|||+..+|.++|+++|+..+... ..++.|.+++.. .+.++++++.++.
T Consensus 582 ~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l-~~~el~~~~~~~~ 660 (997)
T TIGR01106 582 SAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM-TSEQLDEILKYHT 660 (997)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC-CHHHHHHHHHhcC
Confidence 99999999999999999999999999643211 146666665432 2234556666554
Q ss_pred --ceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHH
Q 015327 200 --GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISR 276 (409)
Q Consensus 200 --v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR 276 (409)
+|||++|+||.+||+.+|+.|++|+|+|||+||+|||+.|||||||| .|++.|+++||+++++++|++|+++|.+||
T Consensus 661 ~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR 740 (997)
T TIGR01106 661 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGR 740 (997)
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hhhHHHHHHHHh-hhhhhccHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccC
Q 015327 277 AIFQRMRNYMVRGI-DGLSSTEFIQVL-ELNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGL 346 (409)
Q Consensus 277 ~~~~~i~~~~~~~~-~~i~~~~~~~~~-~~~~~~pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 346 (409)
++|.|+++++.|.+ .++..++..+++ ++..+.|+++++++ ++++++++|.+.++.+++.++.|.|+|+..
T Consensus 741 ~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~ 813 (997)
T TIGR01106 741 LIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNP 813 (997)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCC
Confidence 99999999999999 444433333222 23346799999999 899999999999999999999999999843
No 11
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.2e-56 Score=483.91 Aligned_cols=324 Identities=51% Similarity=0.807 Sum_probs=273.0
Q ss_pred cccccCCcCCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeC-CCeEEEEEcCCHHHHHHhhccCchhH
Q 015327 2 AARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIG 80 (409)
Q Consensus 2 a~~a~~~~~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~-~g~~~~~~KGa~e~il~~c~~~~~~~ 80 (409)
|+.++..+++||+|.|++..+.+....+..++.++.+||++.+|+|++++.++ +|+.++++||+||.|+++|+...+.+
T Consensus 323 a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~ 402 (755)
T TIGR01647 323 AALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIE 402 (755)
T ss_pred HHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHH
Confidence 45566667889999999998776554566788999999999999999998875 47788899999999999998766677
Q ss_pred HHHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHH
Q 015327 81 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE 160 (409)
Q Consensus 81 ~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ 160 (409)
+.+++.+++++++|+|++++||++ .|++|+|+|+++++||||||++++|+.|+++||+|+|+|||+..||.+
T Consensus 403 ~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~ 474 (755)
T TIGR01647 403 EKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKE 474 (755)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 888999999999999999999973 367899999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCc-cccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhC
Q 015327 161 TGRRLGMGTNMYPSS-ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 239 (409)
Q Consensus 161 ia~~lgi~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 239 (409)
+|+++||..+.+... ...|.+. +.+.+.+++++++++++|||++|+||.++|+.+|++|++|+|+|||+||+|||++|
T Consensus 475 IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~A 553 (755)
T TIGR01647 475 TARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKA 553 (755)
T ss_pred HHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhC
Confidence 999999975432222 1222221 22333446778888999999999999999999999999999999999999999999
Q ss_pred CeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhhhhccHHHHHHHHH
Q 015327 240 DIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAILQ 318 (409)
Q Consensus 240 dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~~~~pl~~~~~l~~ 318 (409)
||||||++++++|+++||+|+++++|..|+++|++||.+|+|+++++.|.+ .++..++++.+..++..+|++++++++.
T Consensus 554 dVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~ 633 (755)
T TIGR01647 554 DVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVII 633 (755)
T ss_pred CeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 6555554444444444467999998844
Q ss_pred HhccccccchhhhHhh
Q 015327 319 TAFTSKKDFGKEEREL 334 (409)
Q Consensus 319 ~~~t~~~~~~~~~~~~ 334 (409)
-+++..+.++++.+..
T Consensus 634 ~l~~d~~~~~l~~~~~ 649 (755)
T TIGR01647 634 AILNDGTIMTIAYDNV 649 (755)
T ss_pred HHHHhHhHhhccCCCC
Confidence 4445556666655544
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.1e-56 Score=490.00 Aligned_cols=338 Identities=27% Similarity=0.362 Sum_probs=283.6
Q ss_pred CCChhHHHHHhhccCch--------------------hhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHH
Q 015327 10 NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 69 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~--------------------~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~i 69 (409)
.+||+|.|++.+..+.. ..+..++.++.+||||++|||+++++. ++++++|+|||||.|
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~i 456 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGV 456 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHH
Confidence 37999999987643210 134568899999999999999999886 467899999999999
Q ss_pred HHhhcc-----------CchhHHHHHHHHHHHHH-ccCcceeeeeeccCCCC----------cCCCCCCceEEEEEeccC
Q 015327 70 LNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGSPWQFIGLIPLFD 127 (409)
Q Consensus 70 l~~c~~-----------~~~~~~~~~~~i~~~a~-~GlR~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~l~d 127 (409)
+++|+. +++.++.+.+.+++|++ +|+|||++||+.++.++ ++..|++|+|+|+++++|
T Consensus 457 l~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~D 536 (917)
T TIGR01116 457 LERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLD 536 (917)
T ss_pred HHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeC
Confidence 999963 13456778889999999 99999999999986421 234689999999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCC--CccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
|||++++++|+.|+++||+++|+|||+..||.++|+++|+..+... ...+.|.+++. +.+.+......+..+|||++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecC
Confidence 9999999999999999999999999999999999999999653221 23455555432 22223445566678999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHH
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNY 285 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~ 285 (409)
|+||.++|+.+|+.|++|+|+|||+||+|||+.|||||+|+++++.++++||+++.+++|..|.+++.+||++|+|++++
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~ 695 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQF 695 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hhhHHHHHHHHhhhh-hhccHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 286 MVRGI-DGLSSTEFIQVLELN-FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 286 ~~~~~-~~i~~~~~~~~~~~~-~~~pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
+.|.+ .++..++...++.++ ...|+++++++ ++++++.+|.+.++.+++.++.|.+||+....+
T Consensus 696 i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~ 762 (917)
T TIGR01116 696 IRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEP 762 (917)
T ss_pred HHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCC
Confidence 99999 555444444433333 34799999998 889999999999999999999999999764443
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.5e-56 Score=493.35 Aligned_cols=331 Identities=21% Similarity=0.254 Sum_probs=272.2
Q ss_pred CCChhHHHHHhhccC---c-hh---------------hhcCceEEEEecCCCCCceEEEEEEeC-CCeEEEEEcCCHHHH
Q 015327 10 NLDVIDAAIVGMLAD---P-KE---------------ARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQI 69 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~---~-~~---------------~r~~~~~l~~~pF~s~~kr~sv~v~~~-~g~~~~~~KGa~e~i 69 (409)
.|||+|.|++...+- . .. ...++++++.+||+|++||||++++.+ ++++++|+|||||.|
T Consensus 511 ~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~I 590 (1054)
T TIGR01657 511 VGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETI 590 (1054)
T ss_pred ecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHH
Confidence 389999999987641 0 00 024688999999999999999999874 456789999999999
Q ss_pred HHhhccCchhHHHHHHHHHHHHHccCcceeeeeeccCCC--------CcCCCCCCceEEEEEeccCCCCcchHHHHHHHH
Q 015327 70 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 141 (409)
Q Consensus 70 l~~c~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~ 141 (409)
+++|... ..++.+.+.+++|+++|+|||++|||++++. +++..|++|+|+|+++++||+||+++++|+.|+
T Consensus 591 l~~c~~~-~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~ 669 (1054)
T TIGR01657 591 QSLCSPE-TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELK 669 (1054)
T ss_pred HHHcCCc-CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHH
Confidence 9999742 4577889999999999999999999998642 235678999999999999999999999999999
Q ss_pred hCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCC------------------------------------------------
Q 015327 142 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYP------------------------------------------------ 173 (409)
Q Consensus 142 ~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~------------------------------------------------ 173 (409)
++||+++|+|||+..||.++|+++||..+...
T Consensus 670 ~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (1054)
T TIGR01657 670 RASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLA 749 (1054)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcc
Confidence 99999999999999999999999999643210
Q ss_pred ---CccccCcchhhh--hhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccc
Q 015327 174 ---SSALSGQDRDES--IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 248 (409)
Q Consensus 174 ---~~~l~g~~~~~~--~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~ 248 (409)
..++.|++++.. .....+.+++.++.+|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||+++
T Consensus 750 ~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 750 SRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred cceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 012333333221 111235567788899999999999999999999999999999999999999999999999865
Q ss_pred hHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhhhhccHHHHHHH-HHHhcccccc
Q 015327 249 TDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAI-LQTAFTSKKD 326 (409)
Q Consensus 249 ~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~~~~pl~~~~~l-~~~~~t~~~~ 326 (409)
+ |..|||+++.+++|++|+++|++||+++.++++.+.|.+ +++...+.+ ...+....|+.++|++ .+++...++.
T Consensus 830 -d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~~~Q~l~i~li~~~~~~ 906 (1054)
T TIGR01657 830 -E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSV-SILYLIGSNLGDGQFLTIDLLLIFPVA 906 (1054)
T ss_pred -c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHccCcCccHHHHHHHHHHHHHHH
Confidence 3 458999999999999999999999999999999999988 444333222 2223345889999977 7777777888
Q ss_pred chhhhHhhhHHHhhhhhc
Q 015327 327 FGKEERELLWAHAQRTLH 344 (409)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~ 344 (409)
+.++.+.+..++++++|.
T Consensus 907 l~l~~~~p~~~l~~~~P~ 924 (1054)
T TIGR01657 907 LLMSRNKPLKKLSKERPP 924 (1054)
T ss_pred HHHHcCCchhhcCCCCCC
Confidence 889999999998888763
No 14
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.8e-55 Score=489.22 Aligned_cols=337 Identities=18% Similarity=0.249 Sum_probs=269.4
Q ss_pred CChhHHHHHhhccCc---------h---------hhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHh
Q 015327 11 LDVIDAAIVGMLADP---------K---------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNL 72 (409)
Q Consensus 11 ~~~~d~ai~~~~~~~---------~---------~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~ 72 (409)
+||.|.|++.+.... + .....|++++.+||+|+|||||+++++++|++++|+|||||.|+++
T Consensus 470 ~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~ 549 (1057)
T TIGR01652 470 ASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKR 549 (1057)
T ss_pred cCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHH
Confidence 699999999764311 0 1235789999999999999999999998888999999999999999
Q ss_pred hcc-CchhHHHHHHHHHHHHHccCcceeeeeeccCCCCc-------------------------CCCCCCceEEEEEecc
Q 015327 73 LHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ESSGSPWQFIGLIPLF 126 (409)
Q Consensus 73 c~~-~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~l~ 126 (409)
|.. +++..+.+.+.+++|+++|+|||++|||.++++++ +.+|++|+|+|+++++
T Consensus 550 ~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gie 629 (1057)
T TIGR01652 550 LSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIE 629 (1057)
T ss_pred hhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEh
Confidence 974 34567788999999999999999999999875421 3468999999999999
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCC--------------------------------
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-------------------------------- 174 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~-------------------------------- 174 (409)
||||++++++|+.|+++||+|||+|||+.+||.++|++||+.......
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 709 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNL 709 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999997543211
Q ss_pred -------ccccCcchhhhhhcC---ChhHHhhhcc--ceeecCHhhHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCe
Q 015327 175 -------SALSGQDRDESIVAL---PVDELIEKAD--GFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI 241 (409)
Q Consensus 175 -------~~l~g~~~~~~~~~~---~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~Adv 241 (409)
.+++|..++..+... .+.+++..+. +|||++|+||+++|+.+|+. |++|+|||||+||+|||++|||
T Consensus 710 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdV 789 (1057)
T TIGR01652 710 GDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADV 789 (1057)
T ss_pred ccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCe
Confidence 144555444332211 1233445554 99999999999999999998 9999999999999999999999
Q ss_pred eEEec-cchHHHhhccCEEecCCChhhHHHHH-HHHHHHHHHHHHHHHHHH-hhhHHHHHH-HHhhhhhh---ccHHHHH
Q 015327 242 GIAVA-DATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNYMVRGI-DGLSSTEFI-QVLELNFL---FTLDTVI 314 (409)
Q Consensus 242 GIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i-~~gR~~~~~i~~~~~~~~-~~i~~~~~~-~~~~~~~~---~pl~~~~ 314 (409)
||++. ....+|+.+||+++.+ |..+.++| .+||++|+|+++++.|.+ .++...+.. ++.++..+ .++.+++
T Consensus 790 GIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~ 867 (1057)
T TIGR01652 790 GVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWY 867 (1057)
T ss_pred eeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 99985 4445788999999976 99999998 669999999999999999 443332222 22222222 2344444
Q ss_pred HH-HHHhccccccchh--hhHhhhHHHhhhhhccCCCC
Q 015327 315 AI-LQTAFTSKKDFGK--EERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 315 ~l-~~~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 349 (409)
++ ++++||++|.+.+ .+++..++.+.++|+.++..
T Consensus 868 l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~ 905 (1057)
T TIGR01652 868 MVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREG 905 (1057)
T ss_pred HHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHh
Confidence 44 9999999999766 45777788999999866443
No 15
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.9e-54 Score=479.13 Aligned_cols=344 Identities=17% Similarity=0.228 Sum_probs=276.1
Q ss_pred CChhHHHHHhhcc----------------CchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhc
Q 015327 11 LDVIDAAIVGMLA----------------DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 74 (409)
Q Consensus 11 ~~~~d~ai~~~~~----------------~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~ 74 (409)
.+|.|.|++.... +....+..|++++.+||+|+||||||++++++|++++|+||||+.|+++|.
T Consensus 566 ~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~ 645 (1178)
T PLN03190 566 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVID 645 (1178)
T ss_pred CCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhc
Confidence 3899999987653 222357789999999999999999999998888899999999999999997
Q ss_pred c--CchhHHHHHHHHHHHHHccCcceeeeeeccCCCCc-------------------------CCCCCCceEEEEEeccC
Q 015327 75 N--KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ESSGSPWQFIGLIPLFD 127 (409)
Q Consensus 75 ~--~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~l~d 127 (409)
. +++.++.+.+.+++|+++|+|||++|||+++++++ +.+|++|+|+|+++++|
T Consensus 646 ~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D 725 (1178)
T PLN03190 646 RSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIED 725 (1178)
T ss_pred ccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEec
Confidence 4 34567788999999999999999999999975422 24689999999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCC---------------------------------
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS--------------------------------- 174 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~--------------------------------- 174 (409)
+||++++++|+.|+++||+|||+|||+.+||++||+.|||.++....
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 805 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQ 805 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccc
Confidence 99999999999999999999999999999999999999996543211
Q ss_pred --------------ccccCcchhhhhhc---CChhHHhhhcc--ceeecCHhhHHHHHHHHHhC-CCEEEEEcCCcCCHH
Q 015327 175 --------------SALSGQDRDESIVA---LPVDELIEKAD--GFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAP 234 (409)
Q Consensus 175 --------------~~l~g~~~~~~~~~---~~~~~~~~~~~--v~ar~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~ 234 (409)
.+++|..+...+.. ..+.++..++. +|||++|.||+++|+.+|+. +++|+|||||+||++
T Consensus 806 ~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~ 885 (1178)
T PLN03190 806 NTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVS 885 (1178)
T ss_pred cccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHH
Confidence 12233333222211 12334455555 79999999999999999987 689999999999999
Q ss_pred HHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHH-HHHHHHHHHHHHHHHH-hh-hHHHHHHHHhhhhhhccH
Q 015327 235 ALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLI-SRAIFQRMRNYMVRGI-DG-LSSTEFIQVLELNFLFTL 310 (409)
Q Consensus 235 aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~-gR~~~~~i~~~~~~~~-~~-i~~~~~~~~~~~~~~~pl 310 (409)
|||+|||||++. .++.+|..+||+++.+ |..+.++|.+ ||++|+|+.+.+.|.| .+ ++..+.++++++..|.+.
T Consensus 886 mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~ 963 (1178)
T PLN03190 886 MIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLT 963 (1178)
T ss_pred HHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 999999999984 5667888999999966 9999999886 9999999999999999 33 333334444444444444
Q ss_pred --HHHHHH--HHHhccccccc--hhhhHhhhHHHhhhhhccCCCCCC-ccccc
Q 015327 311 --DTVIAI--LQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFSV 356 (409)
Q Consensus 311 --~~~~~l--~~~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~f~~ 356 (409)
..-+++ |+++||++|++ |..+++..+....+.|..++.-+. ..|+.
T Consensus 964 ~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~ 1016 (1178)
T PLN03190 964 TAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNS 1016 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCH
Confidence 333333 99999999996 578888888888889988865543 45543
No 16
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.2e-53 Score=468.28 Aligned_cols=328 Identities=27% Similarity=0.411 Sum_probs=282.5
Q ss_pred CChhHHHHHhhccC--chhhhcCceEEEEecCCCCCceEEEEEEe-CCCeEEEEEcCCHHHHHHhhcc-----------C
Q 015327 11 LDVIDAAIVGMLAD--PKEARADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN-----------K 76 (409)
Q Consensus 11 ~~~~d~ai~~~~~~--~~~~r~~~~~l~~~pF~s~~kr~sv~v~~-~~g~~~~~~KGa~e~il~~c~~-----------~ 76 (409)
+||+|.|++.+... ....+..++.++.+||+|.+|||+++++. .++++++|+|||||.|+..|+. +
T Consensus 405 g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~ 484 (884)
T TIGR01522 405 GNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLT 484 (884)
T ss_pred CChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCC
Confidence 68999999987642 22345578899999999999999999876 3677899999999999999962 1
Q ss_pred chhHHHHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHH
Q 015327 77 SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLA 156 (409)
Q Consensus 77 ~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ 156 (409)
++.++.+.+.+++|+++|+|++++||+++ +++|+|+|+++++|||||+++++|+.|+++|++++|+|||+..
T Consensus 485 ~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~ 556 (884)
T TIGR01522 485 QQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQE 556 (884)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 33456778889999999999999999974 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHH
Q 015327 157 IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 236 (409)
Q Consensus 157 ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aL 236 (409)
||.++|+++||.... ..++.|.+++. +.+.++.+++.++.+|||++|+||..+|+.+|+.|+.|+|+|||+||+|||
T Consensus 557 tA~~ia~~~Gi~~~~--~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl 633 (884)
T TIGR01522 557 TAVSIARRLGMPSKT--SQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPAL 633 (884)
T ss_pred HHHHHHHHcCCCCCC--CceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHH
Confidence 999999999997532 34566666543 333456677888899999999999999999999999999999999999999
Q ss_pred hhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhh-hhccHHHH
Q 015327 237 KKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN-FLFTLDTV 313 (409)
Q Consensus 237 k~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~-~~~pl~~~ 313 (409)
+.|||||+|| ++++.++++||+++++++|+.|.+++++||++|+|+++++.|.+ .++..+.++++..++ ...|++++
T Consensus 634 ~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 713 (884)
T TIGR01522 634 KLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAM 713 (884)
T ss_pred HhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHH
Confidence 9999999998 69999999999999999999999999999999999999999999 555554444444433 45799999
Q ss_pred HHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 314 IAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 314 ~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
+++ .++++..+|.++++.+++.++.|+|+|+....+
T Consensus 714 qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~ 750 (884)
T TIGR01522 714 QILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDK 750 (884)
T ss_pred HHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCC
Confidence 998 888888899999999999999999999754433
No 17
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.6e-52 Score=453.03 Aligned_cols=325 Identities=20% Similarity=0.239 Sum_probs=270.4
Q ss_pred hcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhc-cCchhHHHHHHHHHHHHHccCcceeeeeeccCC
Q 015327 29 RADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE 107 (409)
Q Consensus 29 r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~-~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~ 107 (409)
.+.|++|+.++|||.||||||+|++++|+.++|||||+.+|+++++ ..+...+...+++++|+.+|||+||+|||++++
T Consensus 526 ~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e 605 (1151)
T KOG0206|consen 526 EETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDE 605 (1151)
T ss_pred ceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCH
Confidence 5689999999999999999999999999999999999999999998 455677888899999999999999999999987
Q ss_pred CCc-------------------------CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHH
Q 015327 108 GSK-------------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 162 (409)
Q Consensus 108 ~~~-------------------------~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia 162 (409)
+++ +.+|+||+++|.+++||+++++|+++|+.|++||||+||+|||..+||++||
T Consensus 606 ~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg 685 (1151)
T KOG0206|consen 606 EEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIG 685 (1151)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHH
Confidence 653 3479999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCC---------------------------------------------ccccCcchhhhhhcCCh---hHH
Q 015327 163 RRLGMGTNMYPS---------------------------------------------SALSGQDRDESIVALPV---DEL 194 (409)
Q Consensus 163 ~~lgi~~~~~~~---------------------------------------------~~l~g~~~~~~~~~~~~---~~~ 194 (409)
..|++..+.... .+++|+.+...+..... .++
T Consensus 686 ~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~l 765 (1151)
T KOG0206|consen 686 YSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLEL 765 (1151)
T ss_pred HhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHH
Confidence 999986543221 12223322222222111 122
Q ss_pred --hhhccceeecCHhhHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHH
Q 015327 195 --IEKADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIIT 270 (409)
Q Consensus 195 --~~~~~v~ar~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~ 270 (409)
-+++.+|||++|.||+.+|+.+++. +.++++||||+||++|+|.|||||+++ .+..+|..+||+.+.. |.-+.+
T Consensus 766 a~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~r 843 (1151)
T KOG0206|consen 766 AKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLER 843 (1151)
T ss_pred HHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhh
Confidence 2445589999999999999999854 889999999999999999999999996 6788899999999977 888888
Q ss_pred HHHH-HHHHHHHHHHHHHHHH-hh---hHHHHHHHHhhhhhhccHHHHHHH--HHHhccccccc--hhhhHhhhHHHhhh
Q 015327 271 AVLI-SRAIFQRMRNYMVRGI-DG---LSSTEFIQVLELNFLFTLDTVIAI--LQTAFTSKKDF--GKEERELLWAHAQR 341 (409)
Q Consensus 271 ~i~~-gR~~~~~i~~~~~~~~-~~---i~~~~~~~~~~~~~~~pl~~~~~l--~~~~~t~~~~~--~~~~~~~~~~~~~~ 341 (409)
++.. ||++|.|+.+++.|.+ .+ .+..+|+++...++..|+...+.+ ++++||++|++ |+.+++.......+
T Consensus 844 LLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~ 923 (1151)
T KOG0206|consen 844 LLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLR 923 (1151)
T ss_pred hheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhh
Confidence 8666 9999999999999999 33 334445555556666677666666 99999999985 67888888889999
Q ss_pred hhccCCCCCC-cccc
Q 015327 342 TLHGLQPPDT-SMFS 355 (409)
Q Consensus 342 ~~~~~~~~~~-~~f~ 355 (409)
.|..++.-+. ..|+
T Consensus 924 ~P~LY~~g~~~~~f~ 938 (1151)
T KOG0206|consen 924 FPELYQRGQLNLLFN 938 (1151)
T ss_pred CCcchhhhhhccccc
Confidence 9999877664 4554
No 18
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-52 Score=427.35 Aligned_cols=339 Identities=24% Similarity=0.371 Sum_probs=288.3
Q ss_pred CcCCChhHHHHHhhc----cCchhhhcCceEEEEecCCCCCceEEEEEEeC---CCeEEEEEcCCHHHHHHhhc------
Q 015327 8 VENLDVIDAAIVGML----ADPKEARADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLH------ 74 (409)
Q Consensus 8 ~~~~~~~d~ai~~~~----~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~---~g~~~~~~KGa~e~il~~c~------ 74 (409)
.-+||+.|.|++++. ++....|..++.+...||||.+|..-.+.... +.++.+.+|||||.++++|+
T Consensus 442 ~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g 521 (1019)
T KOG0203|consen 442 DVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILING 521 (1019)
T ss_pred eccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecC
Confidence 346899999999754 45567899999999999999999987666543 35788899999999999998
Q ss_pred ----cCchhHHHHHHHHHHHHHccCcceeeeeeccCCCCc-----------CCCCCCceEEEEEeccCCCCcchHHHHHH
Q 015327 75 ----NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRR 139 (409)
Q Consensus 75 ----~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~-----------~~~e~~l~~lG~i~l~d~lr~~~~~~I~~ 139 (409)
.+++..+.++....++...|-||++||++.++++++ +.+-.+|.|+|++.+-||||..+++++..
T Consensus 522 ~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~ 601 (1019)
T KOG0203|consen 522 EEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGK 601 (1019)
T ss_pred CCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhh
Confidence 245667888889999999999999999999886543 23457899999999999999999999999
Q ss_pred HHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC----------------------CCccccCcchhhhhhcCChhHHhhh
Q 015327 140 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSALSGQDRDESIVALPVDELIEK 197 (409)
Q Consensus 140 l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~----------------------~~~~l~g~~~~~~~~~~~~~~~~~~ 197 (409)
|+.+||+|+|+|||++.||+++|+..||..... ...++.|.++.+ +....+++++..
T Consensus 602 CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~-~~~~qld~il~n 680 (1019)
T KOG0203|consen 602 CRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD-MSSEQLDELLQN 680 (1019)
T ss_pred hhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc-cCHHHHHHHHHh
Confidence 999999999999999999999999999743211 112344554432 333446666655
Q ss_pred cc--ceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec-cchHHHhhccCEEecCCChhhHHHHHHH
Q 015327 198 AD--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLI 274 (409)
Q Consensus 198 ~~--v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~ 274 (409)
.. +|||.+|+||+.||+..|+.|.+|+.+|||+||+||||+|||||||| .|+|++|+|||+||+|+||.+|+..+++
T Consensus 681 h~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEE 760 (1019)
T KOG0203|consen 681 HQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 760 (1019)
T ss_pred CCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeeccc
Confidence 44 89999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-hhhHHHH-HHHHhhhhhhccHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCC
Q 015327 275 SRAIFQRMRNYMVRGI-DGLSSTE-FIQVLELNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQ 347 (409)
Q Consensus 275 gR~~~~~i~~~~~~~~-~~i~~~~-~~~~~~~~~~~pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (409)
||-+|+|+||.+.|.+ .++--+. |+++.++...+|+..+.+| +.+....+|.++++++.+..++|+|+|+...
T Consensus 761 GRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~ 836 (1019)
T KOG0203|consen 761 GRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPK 836 (1019)
T ss_pred ceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCc
Confidence 9999999999999999 7766544 4444444457899999999 8888899999999999999999999997643
No 19
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-49 Score=394.11 Aligned_cols=316 Identities=20% Similarity=0.230 Sum_probs=263.2
Q ss_pred chhhhcCceEEEEecCCCCCceEEEEEEeC-CCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHHHHHccCcceeeeee
Q 015327 25 PKEARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQ 103 (409)
Q Consensus 25 ~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~ 103 (409)
+.....+|++|..|||+|+.|||+++|+++ ++++..|.|||+-+|...... .+++++...+||++|+|+|.+|.|
T Consensus 532 ~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK 607 (1051)
T KOG0210|consen 532 PLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKK 607 (1051)
T ss_pred CCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEec
Confidence 334456899999999999999999999985 789999999999999887643 457888899999999999999999
Q ss_pred ccCCCCcC--------------------------CCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHH
Q 015327 104 EVPEGSKE--------------------------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAI 157 (409)
Q Consensus 104 ~~~~~~~~--------------------------~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t 157 (409)
.+++++++ .+|.+|+++|+.|.||+++++++.+++.||+|||+|||+|||+.+|
T Consensus 608 ~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlET 687 (1051)
T KOG0210|consen 608 VLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLET 687 (1051)
T ss_pred ccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhh
Confidence 99876531 3589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCC--------------------------CCCccccCcchhhhhhcCC--hhHHhhh--ccceeecCHh
Q 015327 158 AKETGRRLGMGTNM--------------------------YPSSALSGQDRDESIVALP--VDELIEK--ADGFAGVFPE 207 (409)
Q Consensus 158 a~~ia~~lgi~~~~--------------------------~~~~~l~g~~~~~~~~~~~--~~~~~~~--~~v~ar~~P~ 207 (409)
|..+|+..++.+.. ....++.|+.+.-.+...+ +.++... +.++|||+|.
T Consensus 688 A~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPt 767 (1051)
T KOG0210|consen 688 AICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPT 767 (1051)
T ss_pred eeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChh
Confidence 99999999984322 2234556655544433222 2333333 3489999999
Q ss_pred hHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCeeEEe-ccchHHHhhccCEEecCCChhhHHHHHHH-HHHHHHHHHH
Q 015327 208 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLI-SRAIFQRMRN 284 (409)
Q Consensus 208 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~-~~~~~~a~~aaDivl~~~~l~~i~~~i~~-gR~~~~~i~~ 284 (409)
||+++++.+|+. |+.|++||||.||++|++.||+||++ |+++.+|.-|||+.+++ |+.+.+++.| ||..|+|..+
T Consensus 768 QKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~ 845 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAK 845 (1051)
T ss_pred HHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHH
Confidence 999999999987 89999999999999999999999999 67888999999999977 9999999999 9999999999
Q ss_pred HHHHHH--hhhHHHHHHHHhhhhhhccHHHHHHH----HHHhccccccchh-hhHhhhHHHhhhhhccC
Q 015327 285 YMVRGI--DGLSSTEFIQVLELNFLFTLDTVIAI----LQTAFTSKKDFGK-EERELLWAHAQRTLHGL 346 (409)
Q Consensus 285 ~~~~~~--~~i~~~~~~~~~~~~~~~pl~~~~~l----~~~~~t~~~~~~~-~~~~~~~~~~~~~~~~~ 346 (409)
..+|.+ ..+++.+...++..+.|.|...+|-+ |.+..|.+|+|++ .+++......--.|..+
T Consensus 846 laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELY 914 (1051)
T KOG0210|consen 846 LAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELY 914 (1051)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHH
Confidence 999999 55566667777777788899888876 8889999999986 44555554444444443
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.9e-45 Score=387.24 Aligned_cols=236 Identities=23% Similarity=0.375 Sum_probs=204.6
Q ss_pred cCCcCCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccC-chhHHHHH
Q 015327 6 SQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVN 84 (409)
Q Consensus 6 ~~~~~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~ 84 (409)
+.....+|+++|++......... ......+++||++++|+|++.+. |+ .+.||+++.++++|... ...+..+.
T Consensus 337 ~~~~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~~~~~~~ 410 (673)
T PRK14010 337 SSIADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGHIPVDLD 410 (673)
T ss_pred hcCCCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCCCchHHH
Confidence 33455699999999876421100 00112346899999999998752 43 46699999999999742 22334567
Q ss_pred HHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHH
Q 015327 85 AVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 85 ~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 164 (409)
+.+++++++|+|+++++. +++++|++++.||+|||++++|++|+++||+++|+|||+..||.++|++
T Consensus 411 ~~~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e 477 (673)
T PRK14010 411 ALVKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE 477 (673)
T ss_pred HHHHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 778889999999998763 4589999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEE
Q 015327 165 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 244 (409)
Q Consensus 165 lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 244 (409)
+|++ ++|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 478 lGI~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 527 (673)
T PRK14010 478 AGVD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLA 527 (673)
T ss_pred cCCc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEE
Confidence 9995 3699999999999999999999999999999999999999999999
Q ss_pred eccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015327 245 VADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 290 (409)
Q Consensus 245 ~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~ 290 (409)
|++|+++|+++||+|+++++|..|.+++++||.+|.|+++++.|.+
T Consensus 528 MgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~ 573 (673)
T PRK14010 528 MNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSI 573 (673)
T ss_pred eCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999999999999
No 21
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=384.52 Aligned_cols=281 Identities=25% Similarity=0.342 Sum_probs=229.1
Q ss_pred CceEEEEecCCCCCceEEEEEEeC-CCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHHHHHccCcceeeeeeccCCC-
Q 015327 31 DIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 108 (409)
Q Consensus 31 ~~~~l~~~pF~s~~kr~sv~v~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~- 108 (409)
.+-+++.+||+|..+||||++.++ +.++++|+|||||.|.+.|.. +.+++.+++.++.|+.+|+|+|++|+|+++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 588999999999999999999984 567899999999999999953 45788999999999999999999999998765
Q ss_pred -------CcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCC-------
Q 015327 109 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS------- 174 (409)
Q Consensus 109 -------~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~------- 174 (409)
.++..|++|+|+|++.|++++|++++.+|+.|.+++|+++|+||||..||..+||+|||.......
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 357899999999999999999999999999999999999999999999999999999994321100
Q ss_pred ----------------------------------------------ccccCcchhhhhh--cCChhHHhhhccceeecCH
Q 015327 175 ----------------------------------------------SALSGQDRDESIV--ALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 175 ----------------------------------------------~~l~g~~~~~~~~--~~~~~~~~~~~~v~ar~~P 206 (409)
..+.|+.++.... ...++.++.+..+||||+|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 0011111111110 1114567788899999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHH
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 286 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~ 286 (409)
.||.++|+.+|+.|+.|+|+|||+||+.|||+|||||+++++. |.-||.+...-++++++.+.|++||+.+-.-...+
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999998653 77899999988899999999999999877777777
Q ss_pred HHHH-hhhHHHHHHHHhhhhh-hccHHHHHHH
Q 015327 287 VRGI-DGLSSTEFIQVLELNF-LFTLDTVIAI 316 (409)
Q Consensus 287 ~~~~-~~i~~~~~~~~~~~~~-~~pl~~~~~l 316 (409)
+|.. +.+. .|..+.+.++ ...+...||+
T Consensus 917 kYMalYs~i--qFisv~~LY~~~~nl~D~Qfl 946 (1140)
T KOG0208|consen 917 KYMALYSAI--QFISVVFLYLINSNLGDLQFL 946 (1140)
T ss_pred HHHHHHHHH--HHHhhheeeeecccccchhhh
Confidence 7765 3322 2222233222 3455666665
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.2e-42 Score=366.34 Aligned_cols=232 Identities=25% Similarity=0.383 Sum_probs=201.5
Q ss_pred CChhHHHHHhhccCc---hhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccC-chhHHHHHHH
Q 015327 11 LDVIDAAIVGMLADP---KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAV 86 (409)
Q Consensus 11 ~~~~d~ai~~~~~~~---~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~ 86 (409)
.+|..+|++...... ...+..++..+++||++.+|+|++.+ +| ..|.||++|.|++.|... ...++.+.+.
T Consensus 342 ~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~ 416 (679)
T PRK01122 342 ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416 (679)
T ss_pred CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHH
Confidence 468899998776431 11122345677899999998888754 34 578999999999999642 2345678888
Q ss_pred HHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhC
Q 015327 87 INKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 166 (409)
Q Consensus 87 i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lg 166 (409)
+++++++|+|++++|+ +++++|+++++||+|||++++|++|+++||+++|+|||+..||.++|+++|
T Consensus 417 ~~~~a~~G~~~l~va~-------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 483 (679)
T PRK01122 417 VDEVARKGGTPLVVAE-------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG 483 (679)
T ss_pred HHHHHhCCCcEEEEEE-------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 9999999999999996 358999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 015327 167 MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 246 (409)
Q Consensus 167 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 246 (409)
++ ++|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||+
T Consensus 484 Id------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 484 VD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred Cc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 94 369999999999999999999999999999999999999999999999
Q ss_pred cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015327 247 DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 290 (409)
Q Consensus 247 ~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~ 290 (409)
+|+++|+++||+|+++++|..|.+++++||++.-.--....|++
T Consensus 534 sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~ 577 (679)
T PRK01122 534 SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSI 577 (679)
T ss_pred CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhH
Confidence 99999999999999999999999999999998844444566666
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=7.4e-39 Score=337.06 Aligned_cols=234 Identities=24% Similarity=0.345 Sum_probs=204.6
Q ss_pred CCChhHHHHHhhccCch--hhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccC-chhHHHHHHH
Q 015327 10 NLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAV 86 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~--~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~ 86 (409)
..+|+.+|++....+.. .....++..++.||++.++++++.+. +| ..+.||++|.+++.|... ...+..+++.
T Consensus 342 s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~ 417 (675)
T TIGR01497 342 DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQA 417 (675)
T ss_pred CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHH
Confidence 45789999987654211 11122345678999999877776543 45 578999999999998532 2345667888
Q ss_pred HHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhC
Q 015327 87 INKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 166 (409)
Q Consensus 87 i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lg 166 (409)
+++++++|+|++++|+. .+++|++++.||+|||++++|++|+++|++++|+|||+..+|..+|+++|
T Consensus 418 ~~~~a~~G~r~l~va~~-------------~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 418 VDQVARQGGTPLVVCED-------------NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHhCCCeEEEEEEC-------------CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 89999999999999974 38999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 015327 167 MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 246 (409)
Q Consensus 167 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 246 (409)
++ +++++++|++|..+|+.+|++|+.|+|+|||.||+|||++|||||||+
T Consensus 485 I~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 485 VD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred CC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 94 369999999999999999999999999999999999999999999999
Q ss_pred cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015327 247 DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 290 (409)
Q Consensus 247 ~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~ 290 (409)
++++.++++||+++++++|..|.+++++||+++-+...+..|++
T Consensus 535 ~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~ 578 (675)
T TIGR01497 535 SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSI 578 (675)
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999999999999988888888887
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-37 Score=312.93 Aligned_cols=234 Identities=24% Similarity=0.340 Sum_probs=194.4
Q ss_pred CChhHHHHHhhcc------Cchhhh----cCceEEEEecCCCCCceEEEEEEeC----CCeEEEEEcCCHHHHHHhhccC
Q 015327 11 LDVIDAAIVGMLA------DPKEAR----ADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNK 76 (409)
Q Consensus 11 ~~~~d~ai~~~~~------~~~~~r----~~~~~l~~~pF~s~~kr~sv~v~~~----~g~~~~~~KGa~e~il~~c~~~ 76 (409)
|||.++|.+..++ +..-.+ .++++.+.+.|.|..||||+++... +-+++..+|||||+|.++.
T Consensus 539 GDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml--- 615 (1160)
T KOG0209|consen 539 GDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEML--- 615 (1160)
T ss_pred CChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHH---
Confidence 7999999998774 111112 3578899999999999999987652 2368888999999999988
Q ss_pred chhHHHHHHHHHHHHHccCcceeeeeeccCC--------CCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEE
Q 015327 77 SKIGRKVNAVINKFAERGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 148 (409)
Q Consensus 77 ~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~--------~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~ 148 (409)
.+.+..+++...+|+++|.|||+++||.++. ..++++|++|+|.|++.+.-|+|+|++++|+.|++.+++++
T Consensus 616 ~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vv 695 (1160)
T KOG0209|consen 616 RDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVV 695 (1160)
T ss_pred HhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEE
Confidence 4677889999999999999999999999873 24678999999999999999999999999999999999999
Q ss_pred EeCCCcHHHHHHHHHHhCCCCCCCCCc---------------------------------------cccCcchhhhhhcC
Q 015327 149 MITGDQLAIAKETGRRLGMGTNMYPSS---------------------------------------ALSGQDRDESIVAL 189 (409)
Q Consensus 149 mlTGD~~~ta~~ia~~lgi~~~~~~~~---------------------------------------~l~g~~~~~~~~~~ 189 (409)
|+||||+.||.++|+++||..+..+.. .+.|..++......
T Consensus 696 MITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~ 775 (1160)
T KOG0209|consen 696 MITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATD 775 (1160)
T ss_pred EEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhH
Confidence 999999999999999999954311111 11233333333333
Q ss_pred ChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEecc
Q 015327 190 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 247 (409)
Q Consensus 190 ~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 247 (409)
.+.+++..+.+|||+.|.||..++..+++.|+.++|||||.||+.|||.||||||+-+
T Consensus 776 ~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 776 QLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred HHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 3456677788999999999999999999999999999999999999999999999853
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.7e-34 Score=298.42 Aligned_cols=222 Identities=36% Similarity=0.535 Sum_probs=197.0
Q ss_pred cCCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHH
Q 015327 9 ENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVIN 88 (409)
Q Consensus 9 ~~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~ 88 (409)
..++|++.|++..... +.++..||++..|+|++++...++ .|+||+++.+++.|.. +.+.++
T Consensus 259 ~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~ 320 (499)
T TIGR01494 259 LSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVK 320 (499)
T ss_pred CCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHH
Confidence 3579999999987752 123568999999999999876333 4789999999999842 344556
Q ss_pred HHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 89 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 89 ~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
+++.+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 321 ~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi- 386 (499)
T TIGR01494 321 ELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI- 386 (499)
T ss_pred HHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-
Confidence 7889999999999875 79999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccc
Q 015327 169 TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 248 (409)
Q Consensus 169 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~ 248 (409)
+++++|++|.++|+.+|+.|+.|+|+|||.||+|||+.|||||+|+
T Consensus 387 --------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-- 432 (499)
T TIGR01494 387 --------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-- 432 (499)
T ss_pred --------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc--
Confidence 6889999999999999999999999999999999999999999997
Q ss_pred hHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHH
Q 015327 249 TDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFI 299 (409)
Q Consensus 249 ~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~ 299 (409)
++++||+++.++++..+..++.+||++++++++++.|.+ +++..+++.
T Consensus 433 ---a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a 481 (499)
T TIGR01494 433 ---AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLA 481 (499)
T ss_pred ---hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999 665544443
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-34 Score=300.14 Aligned_cols=262 Identities=29% Similarity=0.376 Sum_probs=204.2
Q ss_pred CCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHH
Q 015327 10 NLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINK 89 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~ 89 (409)
..+|+-.||+....+.. ....+....+| .+ ++.-. -+| ..+.-|++..+.+.-. +... .....+.
T Consensus 447 S~HPiA~AIv~~a~~~~--~~~~~~~~~i~----G~--Gv~~~-v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~ 511 (713)
T COG2217 447 SEHPLAKAIVKAAAERG--LPDVEDFEEIP----GR--GVEAE-VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEA 511 (713)
T ss_pred CCChHHHHHHHHHHhcC--CCCccceeeec----cC--cEEEE-ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHH
Confidence 35888899987554311 11111122222 11 22211 245 5678899988755321 1122 5667788
Q ss_pred HHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 90 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 90 ~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
+..+|..++.++... +++|++.+.|++||+++++|++|++.|+++.|+|||+..+|.++|+++||+
T Consensus 512 ~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId- 577 (713)
T COG2217 512 LESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID- 577 (713)
T ss_pred HHhcCCeEEEEEECC-------------EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-
Confidence 899999988888754 899999999999999999999999999999999999999999999999994
Q ss_pred CCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccch
Q 015327 170 NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 249 (409)
Q Consensus 170 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~ 249 (409)
.+++.+.|++|.++|+.||++|+.|+|+|||+||+|+|..||||||||.|+
T Consensus 578 -----------------------------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~Gt 628 (713)
T COG2217 578 -----------------------------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGT 628 (713)
T ss_pred -----------------------------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence 479999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhhhhccHHHHHHHHHHhccccccch
Q 015327 250 DAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFG 328 (409)
Q Consensus 250 ~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~~~~pl~~~~~l~~~~~t~~~~~~ 328 (409)
|.|+++||++++++++..+.++|..+|.++++|++++.|++ ++...+....+. +++ +..--..+.++++.+..
T Consensus 629 DvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g----~l~--p~~A~~am~~SSv~Vvl 702 (713)
T COG2217 629 DVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG----LLT--PWIAALAMSGSSVLVVL 702 (713)
T ss_pred HHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hcC--HHHHHHHHcccHHHHHH
Confidence 99999999999999999999999999999999999999999 665554433333 111 22222555667777766
Q ss_pred hhhHhhh
Q 015327 329 KEERELL 335 (409)
Q Consensus 329 ~~~~~~~ 335 (409)
.+.|...
T Consensus 703 NaLRL~~ 709 (713)
T COG2217 703 NALRLLR 709 (713)
T ss_pred HHHHhhc
Confidence 5555544
No 27
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-33 Score=293.50 Aligned_cols=276 Identities=27% Similarity=0.324 Sum_probs=216.0
Q ss_pred CChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHHH
Q 015327 11 LDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKF 90 (409)
Q Consensus 11 ~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~ 90 (409)
..|+-.||+.+.............+.+-.|....+...+.+ +++. ++-|.-+.+.+.- ....+.++..+++-
T Consensus 627 eHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~---~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~ 698 (951)
T KOG0207|consen 627 EHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTV---DGNE--VLIGNKEWMSRNG---CSIPDDILDALTES 698 (951)
T ss_pred cCchHHHHHHHHHhcccccCccccceeecccCCCcccceEE---eeeE--EeechHHHHHhcC---CCCchhHHHhhhhH
Confidence 47999999988764332222223334444554443322222 2332 7788888776532 22344577888888
Q ss_pred HHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCC
Q 015327 91 AERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN 170 (409)
Q Consensus 91 a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~ 170 (409)
...|..+..+++.. +++|++.++|++|||+..+|..|++.||+++|+||||..+|.++|+++|+.
T Consensus 699 e~~g~tvv~v~vn~-------------~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~-- 763 (951)
T KOG0207|consen 699 ERKGQTVVYVAVNG-------------QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID-- 763 (951)
T ss_pred hhcCceEEEEEECC-------------EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--
Confidence 89999999999875 899999999999999999999999999999999999999999999999974
Q ss_pred CCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchH
Q 015327 171 MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 250 (409)
Q Consensus 171 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~ 250 (409)
.++|.+.|+||.++|+.+|++++.|+|+|||+||+|+|..|||||+|+.+++
T Consensus 764 ----------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~ 815 (951)
T KOG0207|consen 764 ----------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSD 815 (951)
T ss_pred ----------------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccH
Confidence 4799999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhhhhccHHHHHHHHHHhccccccchh
Q 015327 251 AARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGK 329 (409)
Q Consensus 251 ~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~~~~pl~~~~~l~~~~~t~~~~~~~ 329 (409)
.|.++||+|+..|++..++.+|..+|++++|+|.++.|++ ++++.+......++-+.+-+.+..--..++++++++.--
T Consensus 816 vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~s 895 (951)
T KOG0207|consen 816 VAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLS 895 (951)
T ss_pred HHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhh
Confidence 9999999999999999999999999999999999999999 666544332222111112233333337888999998754
Q ss_pred hhHhhhHH
Q 015327 330 EERELLWA 337 (409)
Q Consensus 330 ~~~~~~~~ 337 (409)
..-...|.
T Consensus 896 SllLk~~k 903 (951)
T KOG0207|consen 896 SLLLKRYK 903 (951)
T ss_pred HHHHhhcc
Confidence 44444443
No 28
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=99.98 E-value=5.7e-31 Score=283.89 Aligned_cols=225 Identities=27% Similarity=0.339 Sum_probs=189.0
Q ss_pred CCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEE-EEEE-eCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHH
Q 015327 10 NLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTA-LTYI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVI 87 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~s-v~v~-~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i 87 (409)
..+|+++|++..... .++ .+||.++.+.+. .-++ ..+|.. +.-|+++.+.+ ..+.+...+
T Consensus 479 s~hPia~Ai~~~a~~-----~~~----~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~ 540 (741)
T PRK11033 479 STHPLAQAIVREAQV-----RGL----AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQI 540 (741)
T ss_pred CCCHHHHHHHHHHHh-----cCC----CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHH
Confidence 468999999987642 111 257777776653 2222 235543 34588888754 123455567
Q ss_pred HHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCC
Q 015327 88 NKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 167 (409)
Q Consensus 88 ~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi 167 (409)
+++..+|++++++++. .+++|+++++|++|||++++|+.|++.|++++|+|||+..++..+|+++||
T Consensus 541 ~~~~~~g~~~v~va~~-------------~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 541 NELESAGKTVVLVLRN-------------DDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHhCCCEEEEEEEC-------------CEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 7899999999999974 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEecc
Q 015327 168 GTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 247 (409)
Q Consensus 168 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 247 (409)
. .++++.|++|..+|+.+|+. +.|+|+|||.||+|||+.|||||+|++
T Consensus 608 ~-------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~ 655 (741)
T PRK11033 608 D-------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGS 655 (741)
T ss_pred C-------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecC
Confidence 3 36778999999999999965 589999999999999999999999999
Q ss_pred chHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHH
Q 015327 248 ATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTE 297 (409)
Q Consensus 248 ~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~ 297 (409)
+++.++++||+++.++++..|..++.+||.+++||++++.|++ +++..+.
T Consensus 656 ~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 656 GTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLV 706 (741)
T ss_pred CCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 6654443
No 29
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.97 E-value=6.7e-31 Score=258.79 Aligned_cols=197 Identities=27% Similarity=0.452 Sum_probs=180.5
Q ss_pred EEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCc-hhHHHHHHHHHHHHHccCcceeeeeeccCCCCcCCC
Q 015327 35 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 113 (409)
Q Consensus 35 l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~ 113 (409)
-.+.||+.+.|+.++-. +++ ..+-|||.+.|........ ..+..+....++.++.|-..|+++...
T Consensus 370 ~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~--------- 436 (681)
T COG2216 370 AEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG--------- 436 (681)
T ss_pred ceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC---------
Confidence 46899999988777543 334 5678999999999987543 378889999999999999999999754
Q ss_pred CCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhH
Q 015327 114 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 193 (409)
Q Consensus 114 e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~ 193 (409)
+++|++.++|-++|+.+|-+.+||+.||+.+|+||||+.||..||.+.|++
T Consensus 437 ----~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------- 487 (681)
T COG2216 437 ----RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------- 487 (681)
T ss_pred ----EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-------------------------
Confidence 899999999999999999999999999999999999999999999999996
Q ss_pred HhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 194 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 194 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
+..++++|++|.++|+.-|.+|+.|+|+|||.||+|+|.+||||+||.+++++||+|++.|=+|++...+.+.+.
T Consensus 488 -----dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~ 562 (681)
T COG2216 488 -----DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVE 562 (681)
T ss_pred -----hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhh
Confidence 258999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 015327 274 ISRAI 278 (409)
Q Consensus 274 ~gR~~ 278 (409)
.|++.
T Consensus 563 IGKql 567 (681)
T COG2216 563 IGKQL 567 (681)
T ss_pred hhhhh
Confidence 99874
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.96 E-value=2.2e-27 Score=260.18 Aligned_cols=265 Identities=25% Similarity=0.325 Sum_probs=208.9
Q ss_pred CCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHH
Q 015327 10 NLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINK 89 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~ 89 (409)
..+|+++||+....+. .... ..+|..... .++... .+|. .+.+|+++.+.+... ..+.+...+++
T Consensus 560 s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g-~Gv~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~ 624 (834)
T PRK10671 560 SSHPLARAILDKAGDM-----TLPQ--VNGFRTLRG-LGVSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITA 624 (834)
T ss_pred CCCHHHHHHHHHHhhC-----CCCC--cccceEecc-eEEEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHH
Confidence 4689999998765421 1111 112322211 122211 2453 456799997754321 12346667788
Q ss_pred HHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 90 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 90 ~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
++.+|.+++.+++.. .++|++.+.|++||+++++|+.|++.|++++|+|||+..++..+++++|+.
T Consensus 625 ~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~- 690 (834)
T PRK10671 625 QASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID- 690 (834)
T ss_pred HHhCCCeEEEEEECC-------------EEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-
Confidence 899999999999753 799999999999999999999999999999999999999999999999994
Q ss_pred CCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccch
Q 015327 170 NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 249 (409)
Q Consensus 170 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~ 249 (409)
.+|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+||+++
T Consensus 691 -----------------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 691 -----------------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred -----------------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 268899999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhhh--hccHHHHHHHHHHhcccccc
Q 015327 250 DAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELNF--LFTLDTVIAILQTAFTSKKD 326 (409)
Q Consensus 250 ~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~~--~~pl~~~~~l~~~~~t~~~~ 326 (409)
+.++++||+++.++++..|..++++||.++.+|++++.|++ ++++.+.+.. +++++ .+.+.|..--..+.++++.+
T Consensus 742 ~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~-g~~~p~~g~~l~p~~a~~~m~~ss~~v 820 (834)
T PRK10671 742 DVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA-GILWPFTGTLLNPVVAGAAMALSSITV 820 (834)
T ss_pred HHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhhhhhcccCHHHHHHHhcccceee
Confidence 99999999999999999999999999999999999999999 7766655433 32222 11245555557788888888
Q ss_pred chhhhHh
Q 015327 327 FGKEERE 333 (409)
Q Consensus 327 ~~~~~~~ 333 (409)
.....+.
T Consensus 821 v~nslrl 827 (834)
T PRK10671 821 VSNANRL 827 (834)
T ss_pred hhhhHHh
Confidence 8766554
No 31
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.96 E-value=3.3e-27 Score=248.15 Aligned_cols=236 Identities=29% Similarity=0.419 Sum_probs=187.6
Q ss_pred cCCChhHHHHHhhccCchhhhcCce-EEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHH
Q 015327 9 ENLDVIDAAIVGMLADPKEARADIQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVI 87 (409)
Q Consensus 9 ~~~~~~d~ai~~~~~~~~~~r~~~~-~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i 87 (409)
...+|++.|++..+......... + ....+| .+.....+ +|. ..+..|+++.+ + +. ..+ ...++..+
T Consensus 290 ~~~hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~-~~-~~~-~~~~~~~~ 356 (556)
T TIGR01525 290 SSSHPLARAIVRYAKKRGLELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-E-LA-AEP-ISASPDLL 356 (556)
T ss_pred cCCChHHHHHHHHHHhcCCCccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-h-hc-CCC-chhhHHHH
Confidence 45699999999887532110000 0 111111 12222222 342 34567888765 2 11 111 12234566
Q ss_pred HHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCC-CcEEEeCCCcHHHHHHHHHHhC
Q 015327 88 NKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLG 166 (409)
Q Consensus 88 ~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aG-i~v~mlTGD~~~ta~~ia~~lg 166 (409)
.+++.+|+|++.++.. .+++|.+.++|++||+++++|+.|++.| ++++|+|||+..++..+++++|
T Consensus 357 ~~~~~~g~~~~~v~~~-------------~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lg 423 (556)
T TIGR01525 357 NEGESQGKTVVFVAVD-------------GELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELG 423 (556)
T ss_pred HHHhhCCcEEEEEEEC-------------CEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 7888999999999864 3899999999999999999999999999 9999999999999999999999
Q ss_pred CCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 015327 167 MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 246 (409)
Q Consensus 167 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 246 (409)
+. .+|+++.|++|.++++.++..++.|+|+|||.||++|++.||+||+++
T Consensus 424 i~------------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g 473 (556)
T TIGR01525 424 ID------------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG 473 (556)
T ss_pred CC------------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC
Confidence 94 358899999999999999999999999999999999999999999999
Q ss_pred cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHH
Q 015327 247 DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQ 300 (409)
Q Consensus 247 ~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~ 300 (409)
++++.++..||+++.++++..+.+++++||.+++++++++.|++ +++..+.+..
T Consensus 474 ~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 474 AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999 7766654443
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.95 E-value=1.3e-26 Score=242.59 Aligned_cols=226 Identities=30% Similarity=0.436 Sum_probs=181.6
Q ss_pred CCcCCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHH
Q 015327 7 QVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAV 86 (409)
Q Consensus 7 ~~~~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~ 86 (409)
.....+|++.|+++.+.+.. .+.....+| .+..... .+|.. +..|+++.+.+..
T Consensus 280 e~~~~hp~~~Ai~~~~~~~~----~~~~~~~~~----g~gi~~~---~~g~~--~~ig~~~~~~~~~------------- 333 (536)
T TIGR01512 280 EQASSHPLARAIVDYARKRE----NVESVEEVP----GEGVRAV---VDGGE--VRIGNPRSLEAAV------------- 333 (536)
T ss_pred hccCCCcHHHHHHHHHHhcC----CCcceEEec----CCeEEEE---ECCeE--EEEcCHHHHhhcC-------------
Confidence 34567999999998765321 122222222 1111111 24543 3458877653321
Q ss_pred HHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCC-cEEEeCCCcHHHHHHHHHHh
Q 015327 87 INKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRL 165 (409)
Q Consensus 87 i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~l 165 (409)
...+..+|.+++.++. |..++|.+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++
T Consensus 334 ~~~~~~~~~~~~~v~~-------------~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 334 GARPESAGKTIVHVAR-------------DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CcchhhCCCeEEEEEE-------------CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 0155667888777664 358999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 015327 166 GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 245 (409)
Q Consensus 166 gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 245 (409)
|+. .+|+++.|++|..+++.++..++.|+|+|||.||++|++.||+||++
T Consensus 401 gi~------------------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 450 (536)
T TIGR01512 401 GID------------------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM 450 (536)
T ss_pred CCh------------------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe
Confidence 994 25888899999999999999999999999999999999999999999
Q ss_pred c-cchHHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHH
Q 015327 246 A-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQV 301 (409)
Q Consensus 246 ~-~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~ 301 (409)
+ ++++.++.+||+++.++++..+.+++.+||.+++++++++.|++ +++..+.+..+
T Consensus 451 g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 451 GASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred CCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 78999999999999999999999999999999999999999999 77665555443
No 33
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.95 E-value=4e-26 Score=239.83 Aligned_cols=224 Identities=30% Similarity=0.442 Sum_probs=179.1
Q ss_pred CCChhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHH
Q 015327 10 NLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINK 89 (409)
Q Consensus 10 ~~~~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~ 89 (409)
..+|+++|++..+...............+| .+.+...+ +| ..+..|+++.+.+.. .. +.+
T Consensus 320 s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~~~---~g--~~~~iG~~~~~~~~~---~~--------~~~ 379 (562)
T TIGR01511 320 SEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEGTV---EG--TKIQLGNEKLLGENA---IK--------IDG 379 (562)
T ss_pred CCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEEEE---CC--EEEEEECHHHHHhCC---CC--------CCh
Confidence 358999999987752111000111111111 22222222 34 346789998764421 11 112
Q ss_pred HHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 90 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 90 ~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
+.++|.+++.++.. .+++|++.++|++||+++++|+.|++.|++++|+|||+..++..+++++|++
T Consensus 380 ~~~~g~~~~~~~~~-------------~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~- 445 (562)
T TIGR01511 380 KAEQGSTSVLVAVN-------------GELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN- 445 (562)
T ss_pred hhhCCCEEEEEEEC-------------CEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-
Confidence 45789898887753 4899999999999999999999999999999999999999999999999982
Q ss_pred CCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccch
Q 015327 170 NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 249 (409)
Q Consensus 170 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~ 249 (409)
+|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+.++
T Consensus 446 ------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~ 495 (562)
T TIGR01511 446 ------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGT 495 (562)
T ss_pred ------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcC
Confidence 47788999999999999999999999999999999999999999999989
Q ss_pred HHHhhccCEEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHH
Q 015327 250 DAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTE 297 (409)
Q Consensus 250 ~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~ 297 (409)
+.++++||+++.++++..+..++.+||.+++++++++.|++ ++++.+.
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~ 544 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIP 544 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 6655443
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.76 E-value=1.5e-18 Score=159.64 Aligned_cols=132 Identities=35% Similarity=0.460 Sum_probs=109.9
Q ss_pred CCHHHHHHhhccCchhHHHHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhC
Q 015327 64 GSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL 143 (409)
Q Consensus 64 Ga~e~il~~c~~~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~a 143 (409)
|.++.+.+..... .............|...+.++. ++.++|.+.+.|++||+++++|+.|+++
T Consensus 80 g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~d~~~~~~~~~l~~L~~~ 142 (215)
T PF00702_consen 80 GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGLFGLRDPLRPGAKEALQELKEA 142 (215)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEEEEEEEEBHTTHHHHHHHHHHT
T ss_pred ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEEEeecCcchhhhhhhhhhhhcc
Confidence 8888887765321 1112222334566667766664 4699999999999999999999999999
Q ss_pred CCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeec--CHhhH--HHHHHHHHhC
Q 015327 144 GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHK--YEIVKHLQAR 219 (409)
Q Consensus 144 Gi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~--~P~~K--~~iV~~lq~~ 219 (409)
|++++|+|||+..++..+++.+||.. ..+|+++ +|++| ..+++.++..
T Consensus 143 Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a~~~~kP~~k~~~~~i~~l~~~ 194 (215)
T PF00702_consen 143 GIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFARVIGKPEPKIFLRIIKELQVK 194 (215)
T ss_dssp TEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEESHETTTHHHHHHHHHHHHTCT
T ss_pred Ccceeeeecccccccccccccccccc----------------------------ccccccccccccchhHHHHHHHHhcC
Confidence 99999999999999999999999932 1379999 99999 9999999977
Q ss_pred CCEEEEEcCCcCCHHHHhhCC
Q 015327 220 NHICGMIGNGVNDAPALKKAD 240 (409)
Q Consensus 220 g~~v~~iGDG~ND~~aLk~Ad 240 (409)
++.|+|+|||.||++|+++||
T Consensus 195 ~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 195 PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GGGEEEEESSGGHHHHHHHSS
T ss_pred CCEEEEEccCHHHHHHHHhCc
Confidence 779999999999999999997
No 35
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.65 E-value=1.2e-15 Score=126.09 Aligned_cols=124 Identities=27% Similarity=0.395 Sum_probs=110.1
Q ss_pred ceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhh
Q 015327 117 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 196 (409)
Q Consensus 117 l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 196 (409)
....+.++---.+-++++++|+.|++. ++|++.|||..-+....|...|++..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 357888999999999999999999999 99999999999999999999998532
Q ss_pred hccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEe-c--cchHHHhhccCEEecCCChhhHHHH
Q 015327 197 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTEPGLNVIITA 271 (409)
Q Consensus 197 ~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~-~--~~~~~a~~aaDivl~~~~l~~i~~~ 271 (409)
.+|+...|+.|..+++.|++.++.|.|+|||+||.+||+.||+||.. + +.+..+..+||+++.+ ...++++
T Consensus 72 --rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 --RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred --eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47999999999999999999999999999999999999999999987 3 4677788999999865 5554444
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.35 E-value=1.4e-12 Score=104.40 Aligned_cols=65 Identities=31% Similarity=0.383 Sum_probs=55.5
Q ss_pred cCCChhHHHHHhhcc------CchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhc
Q 015327 9 ENLDVIDAAIVGMLA------DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 74 (409)
Q Consensus 9 ~~~~~~d~ai~~~~~------~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~ 74 (409)
-.|||+|.|++.+.. +....+..+++++.+||||++|||+++++ .++.+++|+|||||.|+++|+
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 468999999997654 24567899999999999999999999998 344577799999999999996
No 37
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.23 E-value=3.1e-11 Score=112.68 Aligned_cols=145 Identities=26% Similarity=0.343 Sum_probs=101.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC--CCccc-c---Cc-----chhh------hh-h---
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE------SI-V--- 187 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~--~~~~l-~---g~-----~~~~------~~-~--- 187 (409)
+.+.+.++|++|++.|++++++||+....+..+.+.+|+..... ++..+ . +. ..+. .. .
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 78899999999999999999999999999999999999853211 11111 0 00 0000 00 0
Q ss_pred ----------------------cCC---hhHHhhhcc---------ceeecCHh--hHHHHHHHHHhC----CCEEEEEc
Q 015327 188 ----------------------ALP---VDELIEKAD---------GFAGVFPE--HKYEIVKHLQAR----NHICGMIG 227 (409)
Q Consensus 188 ----------------------~~~---~~~~~~~~~---------v~ar~~P~--~K~~iV~~lq~~----g~~v~~iG 227 (409)
... ..+.+.... .+..+.|. .|...++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 000 001111110 11233333 477777777654 34599999
Q ss_pred CCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 228 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 228 DG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
|+.||.+|++.|++|++|+|+.+.+|.+||+|+.+++-.++.++|.
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999999999999998875
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.21 E-value=6.8e-11 Score=113.27 Aligned_cols=67 Identities=22% Similarity=0.220 Sum_probs=57.8
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHH
Q 015327 208 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 274 (409)
Q Consensus 208 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 274 (409)
+|..-++.+.+. ...|+++|||.||.+||+.|++|+||+|+.+.+|.+||+|+.+++-.++.++|..
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 566666666543 2459999999999999999999999999999999999999999999999988853
No 39
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.21 E-value=9.9e-11 Score=111.85 Aligned_cols=154 Identities=19% Similarity=0.202 Sum_probs=106.8
Q ss_pred EEEeccCC-CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC--C-------CccccCcchh-------
Q 015327 121 GLIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--P-------SSALSGQDRD------- 183 (409)
Q Consensus 121 G~i~l~d~-lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~--~-------~~~l~g~~~~------- 183 (409)
|++.-.+. +.+.+.++|+++++.|+++.++||+....+..+.+.+++..... + ...+....++
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33333444 89999999999999999999999999999999999999854110 0 0000000000
Q ss_pred -------------------------h---------------------hhh-------c---CChhHHh----hh----cc
Q 015327 184 -------------------------E---------------------SIV-------A---LPVDELI----EK----AD 199 (409)
Q Consensus 184 -------------------------~---------------------~~~-------~---~~~~~~~----~~----~~ 199 (409)
. ... . ....+.. .. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000 0 0000110 00 00
Q ss_pred ce-------eecCH--hhHHHHHHHHHhC-CC---EEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChh
Q 015327 200 GF-------AGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN 266 (409)
Q Consensus 200 v~-------ar~~P--~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~ 266 (409)
.+ ..+.| .+|...++.+.+. |- .|+++||+.||.+||+.|+.||||+|+++.++..||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 3688888877764 33 499999999999999999999999999999999999998999999
Q ss_pred hHHHHHHH
Q 015327 267 VIITAVLI 274 (409)
Q Consensus 267 ~i~~~i~~ 274 (409)
+|.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998875
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.20 E-value=7.3e-11 Score=115.86 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=98.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcccee-ecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-r~~P 206 (409)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+....+. . .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 58999999999999999999999999988888899999984311000000000000 0 0000 1234
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 207 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 207 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
+.|.++++.+.+. .+.|+++|||.||.+|++.|++||++ ++.+..++.||.++..+++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888777654 35799999999999999999999999 888999999999999999999887653
No 41
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.17 E-value=7.8e-11 Score=109.16 Aligned_cols=145 Identities=21% Similarity=0.262 Sum_probs=100.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC--CCccc-cC-c------chhhh------------
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG-Q------DRDES------------ 185 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~--~~~~l-~g-~------~~~~~------------ 185 (409)
.+.+.+.++|++|++.|++++++||++...+..+.+.+++..... ++..+ .. . .....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999853211 01110 00 0 00000
Q ss_pred --hh-cC------------C---hhHHhhhcc-------ceeecC--HhhHHHHHHHHHhC----CCEEEEEcCCcCCHH
Q 015327 186 --IV-AL------------P---VDELIEKAD-------GFAGVF--PEHKYEIVKHLQAR----NHICGMIGNGVNDAP 234 (409)
Q Consensus 186 --~~-~~------------~---~~~~~~~~~-------v~ar~~--P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~ 234 (409)
.. .. . ....+.... .+..++ ...|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 00 0 000111111 111222 34788888777654 235999999999999
Q ss_pred HHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHH
Q 015327 235 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 235 aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
|++.|++|++|+++.+.++..||+|+.+++-.+|.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999888888887653
No 42
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.16 E-value=1.1e-10 Score=112.09 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=57.2
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCE--EecCCChhhHHHHHH
Q 015327 208 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 273 (409)
Q Consensus 208 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~i~ 273 (409)
.|..-++.+.+. ...|+++|||.||.+||+.|+.||||+|+.+.+|++||+ |+.+++-+++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 577777777654 245999999999999999999999999999999999996 777888899998875
No 43
>PRK10976 putative hydrolase; Provisional
Probab=99.15 E-value=2.9e-10 Score=108.74 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=56.6
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccC--EEecCCChhhHHHHHH
Q 015327 208 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 273 (409)
Q Consensus 208 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD--ivl~~~~l~~i~~~i~ 273 (409)
+|..-++.+.+. ...|+++|||.||.+||+.|+.||||+|+++.+|+.|| .|+.+++-.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 476666666544 24599999999999999999999999999999999988 7888888999998875
No 44
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.14 E-value=3.7e-10 Score=103.89 Aligned_cols=131 Identities=15% Similarity=0.159 Sum_probs=96.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+.........+.+.. .+ ....-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~------------tG~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RV------------VGYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---ee------------ECeeecCcc
Confidence 68999999999999975 999999999999999999999963211111111100 00 000113577
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 275 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~g 275 (409)
.|..+++.+++.+..|.++|||.||.+|++.||+||++.......+.+-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999998655555555554433 4577777777664
No 45
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.12 E-value=2.4e-10 Score=106.20 Aligned_cols=146 Identities=23% Similarity=0.259 Sum_probs=99.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC--CCc-cccCc--------chhh-----h------
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALSGQ--------DRDE-----S------ 185 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~--~~~-~l~g~--------~~~~-----~------ 185 (409)
.+.+.+.++|+++++.|+.++++||++...+..+.+.+|+..... .+. +.... .... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999998642211 000 00000 0000 0
Q ss_pred -hh----c-------------CC---hhHHhhhcc---------ceeecCH--hhHHHHHHHHHhC----CCEEEEEcCC
Q 015327 186 -IV----A-------------LP---VDELIEKAD---------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 229 (409)
Q Consensus 186 -~~----~-------------~~---~~~~~~~~~---------v~ar~~P--~~K~~iV~~lq~~----g~~v~~iGDG 229 (409)
.. . .. ...+..... .+..+.| .+|...++.+.+. ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 00 000111110 1222333 4788877777654 3469999999
Q ss_pred cCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhh----HHHHHH
Q 015327 230 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 273 (409)
Q Consensus 230 ~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~i~ 273 (409)
.||.+|++.|++|++|+|+.+.+++.||+|..+++..+ +..+|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665554
No 46
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.08 E-value=5.2e-10 Score=99.78 Aligned_cols=104 Identities=18% Similarity=0.236 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee--cCHhhHHHH
Q 015327 135 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--VFPEHKYEI 212 (409)
Q Consensus 135 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar--~~P~~K~~i 212 (409)
..|+.|++.|+++.++|+.....+..+.+.+|+.. .|.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999842 1111 123333444
Q ss_pred HHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhH
Q 015327 213 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 268 (409)
Q Consensus 213 V~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i 268 (409)
++.++-....|+++||+.||.+|++.|+++++|+++.+.++.+|++|+..++-.++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 45544444579999999999999999999999999999999999999876655544
No 47
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.06 E-value=5.8e-10 Score=104.30 Aligned_cols=66 Identities=23% Similarity=0.201 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHH
Q 015327 207 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 207 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
..|...++.+.+. ...++++||+.||.+||+.|+.|++|+++++..+..||+++...+-.+|.++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 4788888777653 35799999999999999999999999999999999999999988778988765
No 48
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.05 E-value=7.6e-10 Score=97.37 Aligned_cols=105 Identities=26% Similarity=0.355 Sum_probs=82.3
Q ss_pred HHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHH
Q 015327 136 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 215 (409)
Q Consensus 136 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~ 215 (409)
+|+.|++.|+++.++||+....+..+.+.+|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998421 1111 223444433
Q ss_pred H----HhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhh-HHHHH
Q 015327 216 L----QARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 272 (409)
Q Consensus 216 l----q~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~i 272 (409)
+ .-....|+|+||+.||.+|++.|+++++|.++.+..+..+++++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 3 323457999999999999999999999999888899999999998776444 55443
No 49
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.04 E-value=1.4e-09 Score=104.14 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=56.4
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 208 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 208 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
.|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-.+|.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466656555433 2 35999999999999999999999999999999999999999999999998875
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.03 E-value=1.2e-09 Score=101.29 Aligned_cols=128 Identities=21% Similarity=0.248 Sum_probs=92.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCcccc-CcchhhhhhcCChhHHhhhccceee-cC
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS-GQDRDESIVALPVDELIEKADGFAG-VF 205 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~-g~~~~~~~~~~~~~~~~~~~~v~ar-~~ 205 (409)
+++|++.+.|+.|++.|+++.++||.....+..+.+.+|+..- +...... +.... . .+... +.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~~~----~----------~~~~~~~~ 149 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDGKLT----G----------LVEGPIVD 149 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECCEEE----E----------EecCcccC
Confidence 6899999999999999999999999999999999999998531 1100000 00000 0 00001 12
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHH
Q 015327 206 PEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 271 (409)
Q Consensus 206 P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 271 (409)
+..|..+++.+.+. ...|+++||+.||++|++.|+++++++ +.+..+.+||+++.++++..+..+
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 23466666655443 235999999999999999999999985 567788999999999998877654
No 51
>PLN02887 hydrolase family protein
Probab=99.00 E-value=3e-09 Score=111.73 Aligned_cols=67 Identities=24% Similarity=0.321 Sum_probs=56.2
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHH
Q 015327 208 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 274 (409)
Q Consensus 208 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 274 (409)
+|..-++.|.+. | ..|+++|||.||.+||+.|++||||+||.+.+|++||+|+.+++-++|.++|..
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 344445555443 1 359999999999999999999999999999999999999999999999988863
No 52
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.90 E-value=3.6e-09 Score=100.63 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=56.8
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHH
Q 015327 208 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 208 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
+|..-++.+.+. ...++++||+.||++|++.|++|++|+++++.++..||+++.+++-.+|.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 588878777654 24699999999999999999999999999999999999999988888887653
No 53
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.90 E-value=6.5e-09 Score=96.23 Aligned_cols=119 Identities=20% Similarity=0.199 Sum_probs=85.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcccee-ecC
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 205 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-r~~ 205 (409)
.+++|++.+.++.++++|.+|+++||-...-+..+++.+|++...-.........+. . .+.. .+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt----G----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT----G----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe----c----------eeeeeecC
Confidence 789999999999999999999999999999999999999996532211111100000 0 1222 234
Q ss_pred HhhHHHHHHHHHhC-CC---EEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEe
Q 015327 206 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 260 (409)
Q Consensus 206 P~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl 260 (409)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++..... .+..++...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 57888888666543 43 59999999999999999999999975433 444444443
No 54
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.89 E-value=1.2e-08 Score=97.09 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=53.5
Q ss_pred hHHHHHHHHHh----C--CCEEEEEcCCcCCHHHHhhCCeeEEeccch---HHHhhc---cCEEecCCChhhHHHHHH
Q 015327 208 HKYEIVKHLQA----R--NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA---ADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 208 ~K~~iV~~lq~----~--g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~---~~a~~a---aDivl~~~~l~~i~~~i~ 273 (409)
.|...++.+.+ . ...|+++||+.||.+||+.|++||||+|+. +..++. +++|..+++-.+|.++|+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 56655555543 2 456999999999999999999999999987 468876 458888899999998875
No 55
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.79 E-value=2.3e-08 Score=90.57 Aligned_cols=99 Identities=27% Similarity=0.361 Sum_probs=78.3
Q ss_pred HHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHH
Q 015327 135 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 214 (409)
Q Consensus 135 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 214 (409)
.+|+.|++.|+++.++||.....+..+++.+|+... |.. ...|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCcHHHHHH
Confidence 689999999999999999999999999999998421 111 123444444
Q ss_pred HHHh----CCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCCh
Q 015327 215 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 265 (409)
Q Consensus 215 ~lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l 265 (409)
.+.+ ....|+||||+.||.+|++.|+++++++++.+..+..+|+++..++-
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g 157 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGG 157 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCC
Confidence 4332 23569999999999999999999999988888889999999965443
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.78 E-value=5.4e-08 Score=89.13 Aligned_cols=129 Identities=19% Similarity=0.235 Sum_probs=91.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++. +++.++|+.....+..+...+|+.............. .+. .+....|.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------~i~---~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG------------MIT---GYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC------------eEE---Cccccccc
Confidence 4689999999999999 9999999999999999999999853111100000000 000 00012467
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCE-EecCCChhhHHHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVLI 274 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi-vl~~~~l~~i~~~i~~ 274 (409)
.|..+++.++..+..|+|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+..
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 197 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAIDK 197 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHHH
Confidence 888889988888899999999999999999999999887544444445555 55 446666655443
No 57
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.78 E-value=4.4e-08 Score=94.14 Aligned_cols=68 Identities=21% Similarity=0.152 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHh-------CCCEEEEEcCCcCCHHHHhhCCeeEEeccch-H--H---HhhccCEEecCCChhhHHHHHH
Q 015327 207 EHKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-D--A---ARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 207 ~~K~~iV~~lq~-------~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~-~--~---a~~aaDivl~~~~l~~i~~~i~ 273 (409)
.+|..-++.+.+ ....|+++|||.||.+||+.|++||||+++. + . .+..+|+++...+-.++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 356665655544 3457999999999999999999999999544 2 1 3447999999989889998876
Q ss_pred H
Q 015327 274 I 274 (409)
Q Consensus 274 ~ 274 (409)
.
T Consensus 266 ~ 266 (271)
T PRK03669 266 H 266 (271)
T ss_pred H
Confidence 3
No 58
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.73 E-value=2.8e-08 Score=85.46 Aligned_cols=114 Identities=24% Similarity=0.395 Sum_probs=89.3
Q ss_pred HHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHH
Q 015327 135 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 214 (409)
Q Consensus 135 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~ 214 (409)
-.|+.|+++||++.++||++...+..-++.+||.. +|-. -.+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHH
Confidence 46999999999999999999999999999999941 1221 256766666
Q ss_pred HHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChh----hHHHHHHHHHHHHH
Q 015327 215 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLN----VIITAVLISRAIFQ 280 (409)
Q Consensus 215 ~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~----~i~~~i~~gR~~~~ 280 (409)
.|.++ ...|+++||..||.|+|+..++++++.++.+..++.||+|+...+-. -+.++|..++..++
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 55543 34699999999999999999999999999999999999999866543 33444544544443
No 59
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.70 E-value=6.5e-08 Score=88.02 Aligned_cols=117 Identities=25% Similarity=0.335 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
+++|++.+.|+.|++.|+++.++|+-....+..+.+.+|+.. .+...+...... .. ....+..+.|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g--~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKG--FI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCC--eE----------ecceeeEEccc
Confidence 689999999999999999999999999999999999999742 111111110000 00 00112223456
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccC
Q 015327 208 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 257 (409)
Q Consensus 208 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD 257 (409)
.|..+++.+.+. ...++++||+.||.+|++.||++++++......+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677777666543 34599999999999999999999999865555555555
No 60
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.69 E-value=8.7e-08 Score=92.17 Aligned_cols=67 Identities=24% Similarity=0.312 Sum_probs=54.4
Q ss_pred hHHHHHHHHHh----CC-CEEEEEcCCcCCHHHHhhCCeeEEeccchHHHh----hcc-CEEe--cCCChhhHHHHHHH
Q 015327 208 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVLI 274 (409)
Q Consensus 208 ~K~~iV~~lq~----~g-~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~----~aa-Divl--~~~~l~~i~~~i~~ 274 (409)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+|+.+.++ .++ +.+. ..++-.++.++|..
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 56666655553 35 889999999999999999999999999999988 666 6776 56778898888753
No 61
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.61 E-value=3.1e-07 Score=85.14 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=88.0
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCC-CccccCcchhhhhhcCChhHHhhhccc-eee
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADG-FAG 203 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~v-~ar 203 (409)
.-+++|++.+.++.|++.|+++.++||........+.+.++.....+. ...+.+...... .+. .... +..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~---~p~-----~~~~~~~~ 139 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID---WPH-----PCDGTCQN 139 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe---CCC-----CCcccccc
Confidence 357999999999999999999999999999888888887754322211 112222211100 000 0000 000
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHh--hccCEEecCCChhhHHHHHH
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR--SAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~--~aaDivl~~~~l~~i~~~i~ 273 (409)
.....|..+++.++.....|+|+|||.||..|++.||+.++-+.--+-.+ ..+.+.. ++|..|...+.
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11357999999988778889999999999999999999777542111111 1122222 45777766654
No 62
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.50 E-value=1.6e-07 Score=84.77 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=68.1
Q ss_pred cchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh---
Q 015327 131 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE--- 207 (409)
Q Consensus 131 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~--- 207 (409)
+++.+.|+.++++|++++++||+....+..+++.+|++........+.... ......+++|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 777799999999999999999999999999999999964211111000000 01123444444
Q ss_pred hHHHHHHHH------HhCCCEEEEEcCCcCCHHHHh
Q 015327 208 HKYEIVKHL------QARNHICGMIGNGVNDAPALK 237 (409)
Q Consensus 208 ~K~~iV~~l------q~~g~~v~~iGDG~ND~~aLk 237 (409)
.|...++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 399999999 345789999999999999997
No 63
>PLN02954 phosphoserine phosphatase
Probab=98.45 E-value=1.8e-06 Score=80.22 Aligned_cols=132 Identities=21% Similarity=0.293 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC-CCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+...+....+. ....... .... +.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccC------CCcc--cCC
Confidence 478999999999999999999999999999999999999963 1111100000000 0000000 0000 112
Q ss_pred hhHHHHHHHHHhC--CCEEEEEcCCcCCHHHHhh--CCeeEEeccc--hHHHhhccCEEecCCChhhHHHH
Q 015327 207 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIITA 271 (409)
Q Consensus 207 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~--AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~~ 271 (409)
..|.+.++.+.+. ...|+++||+.||+.|.+. ++++++.+.. .+.....+|+++.+ +..+...
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 3477777766654 3579999999999999888 4555555532 23345568999854 6665543
No 64
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.44 E-value=3.7e-07 Score=81.19 Aligned_cols=109 Identities=19% Similarity=0.225 Sum_probs=76.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccc-cCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-SGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
.+-|++++.+..|+..|.+|.++||--...+..++.++||+........+ -+.+- .+...... -.-+..
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G--k~~gfd~~--------~ptsds 157 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG--KYLGFDTN--------EPTSDS 157 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC--cccccccC--------CccccC
Confidence 36799999999999999999999999999999999999997532211111 00000 00000000 001122
Q ss_pred hhHHHHHHHHHhC--CCEEEEEcCCcCCHHHHhhCCeeEEec
Q 015327 207 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA 246 (409)
Q Consensus 207 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~AdvGIa~~ 246 (409)
.-|.+++..+++. ...++|||||+||.+|+..|+.=|+.+
T Consensus 158 ggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 158 GGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 4689999999875 457999999999999999977666664
No 65
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.44 E-value=1.1e-06 Score=81.59 Aligned_cols=134 Identities=15% Similarity=0.088 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCC--CccccCcchhhhhhcCChhHHhhhccc-eeec
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADG-FAGV 204 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v-~ar~ 204 (409)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+. ...+.+...... .+.. ... +..-
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~---kp~p-----~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT---WPHP-----CDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe---ccCC-----cccccccc
Confidence 78999999999999999999999999999999999887 6431110 111112111000 0000 000 0000
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHh--hccCEEecCCChhhHHHHH
Q 015327 205 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR--SAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 205 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~--~aaDivl~~~~l~~i~~~i 272 (409)
....|..+++.++.....|+|||||.||.+|.+.||+.++-+.-.+.++ ..+.+.+ .+|..+...+
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0124788898888777789999999999999999999777331112211 2233333 4466666554
No 66
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.39 E-value=3.3e-06 Score=78.28 Aligned_cols=127 Identities=16% Similarity=0.162 Sum_probs=89.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.+... ......|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSL-----------------PNKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCC-----------------CCCCcCh
Confidence 568999999999999999999999999999999999999985321 111111100 0111123
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCe-eEEecc----chHHHhhccCEEecCCChhhHHHHHHH
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLI 274 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~i~~ 274 (409)
+--..+++.++.....|+++||+.||+.+.+.|++ +|.+.. ..+.....+++++ +++..+...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 33345556666566789999999999999999998 566542 2334455788888 568888877754
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.36 E-value=1.5e-06 Score=78.09 Aligned_cols=114 Identities=16% Similarity=0.070 Sum_probs=76.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee-cC
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VF 205 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar-~~ 205 (409)
-++++++.+.++.|++.|+++.++|+........+.+..|+.... ..++.+...... .....-...++..+.. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~--~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN--DGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC--CCcEEEecCCCCccCcCCC
Confidence 489999999999999999999999999999999999988885321 111111100000 0000000011111111 12
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCeeEE
Q 015327 206 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 244 (409)
Q Consensus 206 P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa 244 (409)
...|..+++.++.. ...++++|||.||+.|.+.||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23588999999887 8899999999999999999987554
No 68
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.33 E-value=4.2e-06 Score=77.91 Aligned_cols=126 Identities=19% Similarity=0.215 Sum_probs=93.9
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
...+-|++++++..|+++|++..++|++....+..+.+..|+..-.. .+..+.+ ....+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~-----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDD-----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCC-----------------CCCCCcC
Confidence 55789999999999999999999999999999999999999964321 0000110 0122345
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCC---eeEEecc--chHHHhhccCEEecCCChhhHHHHH
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad---vGIa~~~--~~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
|.....+++.+....+.++||||..+|..|-+.|+ ||+..|. ........+|+++. ++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 66667777777766558999999999999999999 5666663 45566677999994 477766554
No 69
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.33 E-value=2.2e-06 Score=81.30 Aligned_cols=149 Identities=16% Similarity=0.094 Sum_probs=97.1
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCC----CCc-cccCc-c-hh---------------
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALSGQ-D-RD--------------- 183 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~----~~~-~l~g~-~-~~--------------- 183 (409)
..+..|.+.++|+++++.|+.++++||+.......+.+++++....+ .+. +..+. . .+
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 34567889999999999999999999999999999999888753310 111 11010 0 00
Q ss_pred --hhhh---cC--------------------C----h---hHHhhh----ccc------eeecCH--hhHHHHHHHHHhC
Q 015327 184 --ESIV---AL--------------------P----V---DELIEK----ADG------FAGVFP--EHKYEIVKHLQAR 219 (409)
Q Consensus 184 --~~~~---~~--------------------~----~---~~~~~~----~~v------~ar~~P--~~K~~iV~~lq~~ 219 (409)
.... .. . . .+.+.. +.+ +..+.| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 00 0 0 001110 000 112333 4688888887654
Q ss_pred ----CCEEEEEcCCcCCHHHHhh-CCeeEEeccchHHHhhccC-------EEecCCChhhHHHHHHH
Q 015327 220 ----NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVLI 274 (409)
Q Consensus 220 ----g~~v~~iGDG~ND~~aLk~-AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~i~~ 274 (409)
...|+++||+.||.+|++. ++.||+|+|+.+..+..++ ++....+-.++.+++..
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3569999999999999998 6799999999988886543 65656667788877653
No 70
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.31 E-value=1.5e-06 Score=77.51 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=69.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..-.-.......+. .+... . ..-..+.+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g~----~----~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTGP----I----EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeCc----c----CCcccCCcc
Confidence 368999999999999999999999999999999999999852111000010000 00000 0 000124467
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhC
Q 015327 208 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 239 (409)
Q Consensus 208 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~A 239 (409)
.|..+++.+.+. ...|+++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899888887654 34699999999999999875
No 71
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.27 E-value=2.7e-06 Score=77.59 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=76.9
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccce-eec
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGV 204 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~-ar~ 204 (409)
..++++++.+.|+.+++.|++++++||.....+..+++.+|+..- +......+.+ ..... .+. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g----------~~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTG----------NIDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeC----------CccCCCC
Confidence 457999999999999999999999999999999999999998531 1111110000 00000 000 123
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCcCCHHHHhhCCeeEEecc
Q 015327 205 FPEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVAD 247 (409)
Q Consensus 205 ~P~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~ 247 (409)
.++.|...++.+.+. + ..|.++||+.+|.+|++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 457788777665433 3 368999999999999999999998863
No 72
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.23 E-value=7.7e-06 Score=74.96 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+.... . .++...+ ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCc-----------------CCCCCCChH
Confidence 68899999999999999999999999998888888888884311 0 1111000 011233344
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeE-Ee--c--cchHHHhhccCEEecCCChhhHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AV--A--DATDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~--~--~~~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
-=..+++.++-....|+||||+.+|+.+-+.+++.. ++ | ...+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 445556666555677999999999999999999863 33 3 23344566799988 4466665543
No 73
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.22 E-value=5.5e-06 Score=69.30 Aligned_cols=118 Identities=15% Similarity=0.071 Sum_probs=76.3
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 124 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 124 ~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
....++.+++.+.++.|++.|++++++||.....+....+.+|+... ...++.......... ............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYP-KEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcc-cccccccccccccCC
Confidence 34458999999999999999999999999999999999999887321 111111100000000 000000001112335
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhC-CeeEE
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA-DIGIA 244 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A-dvGIa 244 (409)
..|..+..+.+.+......++++||+.+|+.|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 556666677777766667899999999999999994 44443
No 74
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.18 E-value=2.5e-06 Score=80.19 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccC----EEecCCChhhHHHHHHH
Q 015327 207 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 274 (409)
Q Consensus 207 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD----ivl~~~~l~~i~~~i~~ 274 (409)
..|...++.+.++ | ..|+++||+.||.+|++.+++||+|+++.+..+..|| +|...++-.++.++|..
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3688888887654 3 3589999999999999999999999999999999999 78778888899988864
No 75
>PLN02382 probable sucrose-phosphatase
Probab=98.12 E-value=1.4e-05 Score=81.41 Aligned_cols=67 Identities=22% Similarity=0.167 Sum_probs=53.2
Q ss_pred hHHHHHHHHHhC-------CCEEEEEcCCcCCHHHHhhCC-eeEEeccchHHHhhcc--------CEEec-CCChhhHHH
Q 015327 208 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVLT-EPGLNVIIT 270 (409)
Q Consensus 208 ~K~~iV~~lq~~-------g~~v~~iGDG~ND~~aLk~Ad-vGIa~~~~~~~a~~aa--------Divl~-~~~l~~i~~ 270 (409)
.|...++.|.+. ...|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++.. +++-.+|.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 588888877654 236999999999999999999 6999999999888743 44433 556778888
Q ss_pred HHHH
Q 015327 271 AVLI 274 (409)
Q Consensus 271 ~i~~ 274 (409)
+|..
T Consensus 255 al~~ 258 (413)
T PLN02382 255 AIGH 258 (413)
T ss_pred HHHH
Confidence 8765
No 76
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.08 E-value=9.6e-06 Score=75.87 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.6
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
.+..-+.+.++|++|++.|+.++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556667999999999999999999999999999999999974
No 77
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.05 E-value=2.5e-05 Score=72.03 Aligned_cols=124 Identities=17% Similarity=0.153 Sum_probs=83.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+. ...+..|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDV-----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcC-----------------CCCCCCcH
Confidence 37899999999999999999999999999999999999985321 111111100 01122334
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee---EEecc-c-hHHHhhccCEEecCCChhhHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG---IAVAD-A-TDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG---Ia~~~-~-~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
--..+++.+......+++|||+.+|+.+-+.|++- +.-+. . .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33455555555556799999999999999999974 32332 2 223345688888 4577776654
No 78
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.04 E-value=2.7e-05 Score=74.90 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=82.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
.++.|++.++++.|++.|+++.++||.....+..+....|+.... . .++.+.+. ...+..|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~-~i~~~d~~-----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R-WIIGGDTL-----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e-EEEecCCC-----------------CCCCCCc
Confidence 478999999999999999999999999998888888888874311 0 11111100 0011122
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEecc----chHHHhhccCEEecCCChhhHHHHH
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~----~~~~a~~aaDivl~~~~l~~i~~~i 272 (409)
+-=..+++.+.-....|++|||+.||+.+.+.|++. +++.. ..+.....+|+++. ++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 222344444444456799999999999999999973 44432 23334457899884 477666543
No 79
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=3.2e-05 Score=80.13 Aligned_cols=191 Identities=19% Similarity=0.187 Sum_probs=127.5
Q ss_pred CCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCcccc----------------
Q 015327 115 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS---------------- 178 (409)
Q Consensus 115 ~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~---------------- 178 (409)
++-+|.|++.+.-+.+++....|+.|-++.|+.+-.+-.+....+-.|.++||...+.....+.
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 3457999999999999999999999999999999999999999999999999954322111100
Q ss_pred --C-------------------cchhhh------------------h-hcC-----------------ChhHHhhhccce
Q 015327 179 --G-------------------QDRDES------------------I-VAL-----------------PVDELIEKADGF 201 (409)
Q Consensus 179 --g-------------------~~~~~~------------------~-~~~-----------------~~~~~~~~~~v~ 201 (409)
+ ..++.. + +.. +.+.+..-...|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 0 000000 0 000 011111223368
Q ss_pred eecCHhhHHHHHHHHHhCCCEEEEEcCCcCC--HHHHhhCCeeEEecc--ch-----------HH-HhhccC--------
Q 015327 202 AGVFPEHKYEIVKHLQARNHICGMIGNGVND--APALKKADIGIAVAD--AT-----------DA-ARSAAD-------- 257 (409)
Q Consensus 202 ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND--~~aLk~AdvGIa~~~--~~-----------~~-a~~aaD-------- 257 (409)
..++|+.--++++.+|+.|++|+++|...|- .-.+-+||++|++.. .+ .. ..++.|
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 8999999999999999999999999999885 345678999999852 11 00 011222
Q ss_pred ---------EEecCCChhhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhhhh
Q 015327 258 ---------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI-DGLSSTEFIQVLELN 305 (409)
Q Consensus 258 ---------ivl~~~~l~~i~~~i~~gR~~~~~i~~~~~~~~-~~i~~~~~~~~~~~~ 305 (409)
+-+....+-.+.++|.-+|-...-+|+.+.|.+ ..+...+..+.+.++
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~ 1110 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFF 1110 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222344667778888988889999999988 443333333344433
No 80
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.01 E-value=2.9e-05 Score=71.31 Aligned_cols=122 Identities=15% Similarity=0.160 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ..++.+.+. ...+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSL-----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCC-----------------CCCCCChH
Confidence 58999999999999999999999999999999999999985321 111111100 01122233
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEE-e--ccc--hHHHhhccCEEecCCChhhHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--ADA--TDAARSAADIVLTEPGLNVIIT 270 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~--~~~--~~~a~~aaDivl~~~~l~~i~~ 270 (409)
-=..+.+.+......|++|||+.+|+.+.+.|++... + |.. .......+|+++.+ +..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 2334445554445679999999999999999997643 3 211 12333468888844 655543
No 81
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.99 E-value=3.2e-05 Score=71.71 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=35.8
Q ss_pred CcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 130 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 130 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
-+.+.++|+.|++.|++++++||+....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 82
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.98 E-value=2.8e-05 Score=74.64 Aligned_cols=140 Identities=9% Similarity=0.084 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHh-CCCcEEEeCCCcHHHHHHHHHHhCCC---CCC---C--CCc----cccCcchh-------hhhh
Q 015327 128 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMG---TNM---Y--PSS----ALSGQDRD-------ESIV 187 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~lgi~---~~~---~--~~~----~l~g~~~~-------~~~~ 187 (409)
.+-+++.++|+.|++ .|+.++++||+....+..+...+++. .+. . ... .+...... ....
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456789999999997 89999999999999998888766541 000 0 000 00000000 0000
Q ss_pred -------------------cC--C---hh----HHhhhcc--------ceeecCH--hhHHHHHHHHHhC----CCEEEE
Q 015327 188 -------------------AL--P---VD----ELIEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 225 (409)
Q Consensus 188 -------------------~~--~---~~----~~~~~~~--------v~ar~~P--~~K~~iV~~lq~~----g~~v~~ 225 (409)
.. . .. .+..... .+..+.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00 0 00 0111111 1223334 4788877776544 357999
Q ss_pred EcCCcCCHHHHhhC----CeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 226 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 226 iGDG~ND~~aLk~A----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
+||+.||.+||+.+ +.||+||++. ..|++.+.+ ...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999775 457787754 555555543
No 83
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.98 E-value=4.8e-05 Score=71.15 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.... ..++.+.. ....+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDT-----------------LAERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCc-----------------CCCCCCCHH
Confidence 68999999999999999999999999988888888888874321 11111110 012233444
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEe--cc--c-hHHHhhccCEEecCCChhhHHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--AD--A-TDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~--~~--~-~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
-=..+++.+.-....|+||||+.+|+.+-+.|++. |++ |. . .......+|+++. ++..+...+.
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~ 225 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhc
Confidence 44566666766667899999999999999999976 333 21 1 1223356899984 4766665543
No 84
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.90 E-value=7.8e-05 Score=68.96 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=82.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC-CCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+.. +..+ .++.+.+.. ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCcCC-----------------CCCCC
Confidence 3799999999999999999999999999999999999998852 1111 122111100 11223
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCeeE--Eeccc---h-HHHhhccCEEecCCChhhHHHH
Q 015327 206 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVADA---T-DAARSAADIVLTEPGLNVIITA 271 (409)
Q Consensus 206 P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGI--a~~~~---~-~~a~~aaDivl~~~~l~~i~~~ 271 (409)
|+-=....+.+.-. ...|+||||+.+|+.+-+.|++.. ++..+ . ......+|+++. ++..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 33323344444433 367999999999999999999986 33321 1 122345777774 46655543
No 85
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.87 E-value=8.7e-05 Score=71.30 Aligned_cols=42 Identities=7% Similarity=-0.015 Sum_probs=38.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
+...+.+.++|++|++.||.|++.||........+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346677999999999999999999999999999999999985
No 86
>PRK08238 hypothetical protein; Validated
Probab=97.87 E-value=0.00017 Score=74.81 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=72.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
|++|++.+.|+++++.|+++.++|+-....+..+++.+|+.+. ++.+++ ...+.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 4789999999999999999999999999999999999997211 111110 1134566
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 250 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~ 250 (409)
.|.+.++..... +.+.++||+.+|.++++.|+-+++++.+..
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 676544422111 226889999999999999999999985543
No 87
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.86 E-value=6.4e-05 Score=69.77 Aligned_cols=122 Identities=16% Similarity=0.208 Sum_probs=79.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
-++.|++.++|+.|++.|+++.++|+........+.+.+|+..-.. .++.+... ...+..|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccC-----------------CCCCCCH
Confidence 4688999999999999999999999999999999999998853211 11111100 0122233
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEe-ccc---hHHHhhccCEEecCCChhhHH
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADA---TDAARSAADIVLTEPGLNVII 269 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~-~~~---~~~a~~aaDivl~~~~l~~i~ 269 (409)
+-=..+.+.+.-....|++|||..||+.+-+.|++.... ..+ .+.-...+|+++.+ +..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 322333344433345699999999999999999987443 322 11222357777743 55554
No 88
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.84 E-value=0.00016 Score=68.62 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++.|+++.++||.....+..+-+.+|+..... ..++.+.+. ...+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~-----------------~~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDV-----------------PAGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccC-----------------CCCCCCHH
Confidence 578999999999999999999999999999999988888854221 111211110 01223344
Q ss_pred hHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+++.+.-. ...|+||||..+|+.+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 334455555432 45699999999999999999965
No 89
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.79 E-value=0.00027 Score=67.65 Aligned_cols=97 Identities=13% Similarity=0.057 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++|+.|++.|+++.++||.....+..+-+..|+..... ..++.+.+. ...+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 578999999999999999999999999988888777777643211 111111110 01222333
Q ss_pred hHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+++.+.-. ...|+||||+.+|+.+-+.|++-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 334444555433 36799999999999999999963
No 90
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.72 E-value=0.0004 Score=66.89 Aligned_cols=121 Identities=13% Similarity=0.103 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..... .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 678999999999999999999999999999999999999853211 1111110 00 0121
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeE-Ee--ccch--HHHhhccCEEecCCChhhHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AV--ADAT--DAARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~--~~~~--~~a~~aaDivl~~~~l~~i~~~i 272 (409)
-=..+++.+.-....|+||||+.+|+.+-+.|++-. ++ +..+ +.....+|+++ +++..|...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 112233333334557999999999999999999753 23 2122 22344689998 4477777654
No 91
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.69 E-value=0.00032 Score=66.51 Aligned_cols=116 Identities=12% Similarity=0.153 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.+.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985321 1122211110 1233344
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEec--cc-hHHHhhccCEEecC
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DA-TDAARSAADIVLTE 262 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~--~~-~~~a~~aaDivl~~ 262 (409)
--..+.+.+......|+||||..+|+.+-+.|++- |++. .. .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 44555666665567799999999999999999975 3332 22 12223468888855
No 92
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.65 E-value=0.00033 Score=66.98 Aligned_cols=121 Identities=18% Similarity=0.126 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++.|+++.++|+.....+..+-..+|+.... ..++.+.+. ...+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~-----------------~~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDV-----------------YRGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccC-----------------CCCCCCHH
Confidence 57899999999999999999999999999999999999885321 112222111 01233343
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEec-cchHHHhhccCEEecCCChhhHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA-DATDAARSAADIVLTEPGLNVII 269 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~-~~~~~a~~aaDivl~~~~l~~i~ 269 (409)
-=..+++.+.-....|+||||..+|+.+-+.|++- |++. ..+......+|+++.+ +..+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 33455566655566799999999999999999975 3443 2222233457888744 55543
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.65 E-value=0.00066 Score=65.13 Aligned_cols=135 Identities=12% Similarity=0.070 Sum_probs=83.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCc-ch--hhhhhcCChhHHhhhccceee
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ-DR--DESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~-~~--~~~~~~~~~~~~~~~~~v~ar 203 (409)
-+++||+.+.++.|++.|+++.++||-....+..+.+++|+..... .++.+. .. +..+.... . . -
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~--~IvSN~L~f~~dGvltG~~-~------P---~ 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV--KVVSNFMDFDEDGVLKGFK-G------P---L 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc--eEEeeeEEECCCCeEeCCC-C------C---c
Confidence 4689999999999999999999999999999999999999853221 110000 00 00000000 0 0 0
Q ss_pred cCHhhHHHHHH-----HHH--hCCCEEEEEcCCcCCHHHHhhC---CeeEEec--cc-----hHHHhhccCEEecCCChh
Q 015327 204 VFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGLN 266 (409)
Q Consensus 204 ~~P~~K~~iV~-----~lq--~~g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~-----~~~a~~aaDivl~~~~l~ 266 (409)
+....|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| +. -+.-.++=|||+.++.--
T Consensus 188 i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~ 267 (277)
T TIGR01544 188 IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETL 267 (277)
T ss_pred ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCc
Confidence 01134554333 222 2345799999999999996554 2224444 32 233557899999987665
Q ss_pred hHHHHHH
Q 015327 267 VIITAVL 273 (409)
Q Consensus 267 ~i~~~i~ 273 (409)
.++..|.
T Consensus 268 ~v~~~il 274 (277)
T TIGR01544 268 EVANSIL 274 (277)
T ss_pred hHHHHHH
Confidence 6655543
No 94
>PRK11590 hypothetical protein; Provisional
Probab=97.60 E-value=0.00036 Score=64.45 Aligned_cols=107 Identities=12% Similarity=0.013 Sum_probs=75.2
Q ss_pred CCCcchHHHH-HHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccc-eeecC
Q 015327 128 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGVF 205 (409)
Q Consensus 128 ~lr~~~~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v-~ar~~ 205 (409)
.+.|++.++| +.+++.|++++++|+-....+..+++.+|+.. . ..+.+.+++.... ..+ -..|.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~---~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-R---VNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-c---CceEEEEEEEEEc----------cEECCccCC
Confidence 5689999999 57888999999999999999999999988621 0 0011111110000 000 12356
Q ss_pred HhhHHHHHHH-HHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccc
Q 015327 206 PEHKYEIVKH-LQARNHICGMIGNGVNDAPALKKADIGIAVADA 248 (409)
Q Consensus 206 P~~K~~iV~~-lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~ 248 (409)
.+.|..-++. +......+.+-||+.||.|||+.|+.+++++..
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 6888876654 343455678999999999999999999999743
No 95
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.53 E-value=0.00018 Score=65.81 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhC
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 166 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lg 166 (409)
++.+.+.++|++|++.|+.++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999888754
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.51 E-value=0.00042 Score=64.13 Aligned_cols=107 Identities=11% Similarity=0.054 Sum_probs=73.8
Q ss_pred CCCcchHHHHH-HHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
.++|++.++|+ .+++.|++++++|+-....+..+++..++... ..++ +.++... .. ..+ .-..|..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g---g~~-----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG---GWV-----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC---ceE-----cCccCCC
Confidence 57999999996 78889999999999999999999988665221 0111 1111100 00 000 1123566
Q ss_pred hhHHHHHHH-HHhCCCEEEEEcCCcCCHHHHhhCCeeEEecc
Q 015327 207 EHKYEIVKH-LQARNHICGMIGNGVNDAPALKKADIGIAVAD 247 (409)
Q Consensus 207 ~~K~~iV~~-lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 247 (409)
+.|..-++. +......+.+-||+.||.|||+.||.++++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 888776654 33334567799999999999999999999974
No 97
>PRK11587 putative phosphatase; Provisional
Probab=97.49 E-value=0.00067 Score=62.82 Aligned_cols=115 Identities=13% Similarity=0.135 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++|+.....+...-...|+.. . ..++.+.+. ...+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 578999999999999999999999988776666666666621 1 111111100 01122333
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEeccc-hHHHhhccCEEecC
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA-TDAARSAADIVLTE 262 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~-~~~a~~aaDivl~~ 262 (409)
-=....+.+.-....|++|||..+|+.+-+.|++. |++..+ .......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33445555555567899999999999999999985 556532 22233457877744
No 98
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.49 E-value=0.00045 Score=63.76 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|++++++|+-.........+.+|+.... ..++.+.+. ...+-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 68999999999999999999999999888888888888874321 011111100 01222333
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee-EEec
Q 015327 208 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 246 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~ 246 (409)
-=..+.+.+......+++|||.. +|+.+-+.|++- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 33444555544456799999998 999999999974 5554
No 99
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.46 E-value=0.00046 Score=73.35 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
.-+.+.++|+.|+++|+.++++||+....+..+.+.+|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4457899999999999999999999999999999999873
No 100
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.43 E-value=0.00034 Score=63.69 Aligned_cols=94 Identities=19% Similarity=0.137 Sum_probs=68.1
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++.+. .+..+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 3456777899999999999999999999999999999999985321 1111111 0111444
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhC
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 239 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 239 (409)
|+--..+++.++.....|++|||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5555566666666667899999999999887654
No 101
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.41 E-value=0.00082 Score=69.56 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++. -....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v------------------~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQI------------------NSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCC------------------CCCCCcH
Confidence 68899999999999999999999999999999999999985321 111111110 0011222
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEec--cchHHHhhccCEEecCCChhhHHHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIITAVLI 274 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~--~~~~~a~~aaDivl~~~~l~~i~~~i~~ 274 (409)
-=..+++.+ ....|++|||+.+|+.+-+.|++- |++. ...+.....+|+++. ++..+...+..
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILST 455 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHH
Confidence 112222222 235699999999999999999974 4443 222222345889884 47777766543
No 102
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.33 E-value=0.0009 Score=64.89 Aligned_cols=118 Identities=17% Similarity=0.116 Sum_probs=74.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++.|+++.++|+-.......+-...+.......-.++.+.+. ...+..|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~-----------------~~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV-----------------PKKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc-----------------CCCCCCHH
Confidence 6899999999999999999999999888777766655432110000011111100 01223343
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEE-eccc--hHHHhhccCEEecC
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADA--TDAARSAADIVLTE 262 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~--~~~a~~aaDivl~~ 262 (409)
-=..+++.+.-....|+||||+.+|+.+-+.|++... +..+ +......+|+++.+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 3345556665556679999999999999999997633 3222 11112357888744
No 103
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.32 E-value=0.00063 Score=64.53 Aligned_cols=68 Identities=19% Similarity=0.192 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCcCCHHHHhhCCeeEEeccchHH-----Hhhcc---C-EEecCCChhhHHHHHH
Q 015327 207 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 273 (409)
Q Consensus 207 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~-----a~~aa---D-ivl~~~~l~~i~~~i~ 273 (409)
..|...|+.|+++ + ..|+++||+.||.+||..++-||.++|+.+. ..... . ++-..+.-.+|.+++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5799999998876 2 3588899999999999999999999998777 22222 2 3444556667777765
Q ss_pred H
Q 015327 274 I 274 (409)
Q Consensus 274 ~ 274 (409)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 104
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.29 E-value=0.0014 Score=71.75 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhC--CCEEEEEcCCcCCHHHHhhC---CeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 207 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 207 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~A---dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
.+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++ +.+|++.+.++ ..+...+.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 4799988888764 35799999999999999996 588888874 46888999653 44555543
No 105
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.28 E-value=0.0012 Score=64.20 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=77.3
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 124 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 124 ~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
...+++.+++.++|+.|++.|+++.++||.....+..+.+.+|+....+. .+.+.+. ...++.. ..--+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhccc-CCCCC
Confidence 46789999999999999999999999999999999999999988531111 1111110 0000000 01124
Q ss_pred cCHhhHHHHHHHHHh-CCCEEEEEcCCcCCHHHHhhCCee
Q 015327 204 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~-~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-.|+-+...++.+.. ....++||||..+|+.+-+.|++.
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 456777777776644 347899999999999999999987
No 106
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.27 E-value=0.00099 Score=60.53 Aligned_cols=96 Identities=16% Similarity=0.147 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+.... . .++...+. ...+-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhhc-----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888874221 1 11111000 01122232
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+.+.+.-....+++|||+.+|+.+-+.|++-
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 22344555555567799999999999999999875
No 107
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.27 E-value=0.0021 Score=64.55 Aligned_cols=121 Identities=17% Similarity=0.153 Sum_probs=82.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
-++.||+.+.++.|++.|+++.++|+.....+..+-+.+||.... ..++.+.+. ....-.|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv-----------------~~~KP~P 275 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDV-----------------YRGKPDP 275 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999984311 111111110 0112233
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEeccchHHH-hhccCEEecCCChhhH
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAA-RSAADIVLTEPGLNVI 268 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~~a-~~aaDivl~~~~l~~i 268 (409)
+-=...++.++-....|+||||..+|+.+-+.|++- |++..+.+.. ...+|+++.+ +..+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 334555666666677899999999999999999975 3333322222 2358888744 5544
No 108
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.20 E-value=0.0026 Score=57.16 Aligned_cols=128 Identities=21% Similarity=0.143 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHH---------------HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 192 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---------------ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~ 192 (409)
.+.||+.++++.|++.|+++.++|..... ....+-+..|+. +.. ++......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~~-i~~~~~~~--------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LDG-IYYCPHHP--------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cce-EEECCCCC---------
Confidence 36899999999999999999999987621 111222334431 000 00000000
Q ss_pred HHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEeccc--hH-HHhhcc--CEEecCCChh
Q 015327 193 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TD-AARSAA--DIVLTEPGLN 266 (409)
Q Consensus 193 ~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~--~~-~a~~aa--Divl~~~~l~ 266 (409)
.......+-.|+--..+++.+.-..+.++||||+.+|+.+-+.|++. |.+..+ .. .....+ |+++. ++.
T Consensus 96 ---~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~--~l~ 170 (181)
T PRK08942 96 ---EDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLD--SLA 170 (181)
T ss_pred ---CCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeec--CHH
Confidence 00001223344444555666665567899999999999999999974 233222 11 122235 77773 466
Q ss_pred hHHHHHH
Q 015327 267 VIITAVL 273 (409)
Q Consensus 267 ~i~~~i~ 273 (409)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6665543
No 109
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.18 E-value=0.001 Score=62.06 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=68.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
-.+.|++.+.++.|++.|+++.++|+-....+...-+..|+.... ..++.+.+. ...+-.|
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~~-----------------~~~KP~p 152 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHTF-----------------GYPKEDQ 152 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeeeC-----------------CCCCCCH
Confidence 368899999999999999999999998888888777778874211 111111000 0111122
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee--EEecc
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 247 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~ 247 (409)
+-=..+.+.+.-....|++|||..+|+.+-+.|++. +++.+
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 222333444444456799999999999999999996 44543
No 110
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.16 E-value=0.00048 Score=60.21 Aligned_cols=98 Identities=18% Similarity=0.229 Sum_probs=70.6
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
..++.|++.+.++.|++.|++++++|+..........+.+|+... . ..++...+. ...+..
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f-~~i~~~~~~-----------------~~~Kp~ 135 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-F-DEIISSDDV-----------------GSRKPD 135 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-C-SEEEEGGGS-----------------SSSTTS
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-c-ccccccchh-----------------hhhhhH
Confidence 346889999999999999999999999999999999999988521 1 111111100 011222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
|+-=..+++.+.-....+++|||+..|+.+-+.||+-
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 3333456666665667899999999999999999875
No 111
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.11 E-value=0.0018 Score=59.63 Aligned_cols=121 Identities=11% Similarity=0.084 Sum_probs=76.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++. +++.++|+-....+..+.+.+|+.... ..++...+. ...+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-----------------CCCCCCHH
Confidence 5789999999999999 999999999988888888888885321 111111000 01122222
Q ss_pred hHHHHHHHH-HhCCCEEEEEcCCc-CCHHHHhhCCee-EEec--cchHHHhhccCEEecCCChhhHHH
Q 015327 208 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIIT 270 (409)
Q Consensus 208 ~K~~iV~~l-q~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~--~~~~~a~~aaDivl~~~~l~~i~~ 270 (409)
-=..+++.+ .-....+++|||+. +|+.+-+.+++- |.+. ..+......+++++. ++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 223445555 43456799999998 899999999973 4443 222122234667763 3555543
No 112
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.09 E-value=0.001 Score=62.59 Aligned_cols=89 Identities=19% Similarity=0.185 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCC----cHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------C
Confidence 34555999999999999999999998 667899999999995311 1112111110 0
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
..| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 011 122 2344433 589999999999999999864
No 113
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.04 E-value=0.0019 Score=54.70 Aligned_cols=93 Identities=14% Similarity=0.144 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCc--------HHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhc
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 198 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 198 (409)
-++.|++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-------------------
Confidence 3678999999999999999999999998 67777788888873110 00000
Q ss_pred cceeecCHhhHHHHHHHHH-hCCCEEEEEcC-CcCCHHHHhhCCee
Q 015327 199 DGFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIG 242 (409)
Q Consensus 199 ~v~ar~~P~~K~~iV~~lq-~~g~~v~~iGD-G~ND~~aLk~AdvG 242 (409)
.+.+-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 011222333344555552 45577999999 69999999999864
No 114
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.02 E-value=0.0011 Score=59.23 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=60.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++|+.|+++|+++.++|+... +..+.+.+|+.... ..++.+.+. ...+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 34566777774221 011111000 01222233
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+++.+.-....|+||||+.+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22334444443445699999999999999999975
No 115
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.98 E-value=0.0017 Score=61.20 Aligned_cols=92 Identities=17% Similarity=0.213 Sum_probs=63.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCc----HHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
.|.+++.+.++.+++.|+++.++||+. ..++..+.+..|+....+...++.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 477889999999999999999999964 5688888988998421111112211110
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEe
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV 245 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~ 245 (409)
.-.+|...+ ++. ..++++||..+|..+-+.|++- |.+
T Consensus 173 -~K~~K~~~l---~~~-~i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 173 -GQYTKTQWL---KKK-NIRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred -CCCCHHHHH---Hhc-CCeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 012343333 333 3589999999999999999965 444
No 116
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.97 E-value=0.003 Score=56.10 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=64.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+ ....+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~-----------------~~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGD-----------------VGRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCC-----------------CCCCCCCHH
Confidence 688999999999999999999999988777 5555557774211 11111100 011222333
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+.+.+......|++|||...|+.+-+.+++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 33455555555567899999999999999998873
No 117
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.96 E-value=0.014 Score=53.65 Aligned_cols=146 Identities=21% Similarity=0.306 Sum_probs=94.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCc-------cccCcchhhhh------hcCChhHH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS-------ALSGQDRDESI------VALPVDEL 194 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~-------~l~g~~~~~~~------~~~~~~~~ 194 (409)
.+-|++.++++.|++.=-.+++ |-.-..-+..+|..+|++....... .+...+-.+.+ ...+-+++
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~-STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVI-STSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccCCceEE-eccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876555554 4455667888999999854322111 11111111111 11222333
Q ss_pred hhhcc-ceeecCHhhHHHHHHHHHh---------------C---CCEEEEEcCCcCCHHHHhhCC-ee-EEec-cchHHH
Q 015327 195 IEKAD-GFAGVFPEHKYEIVKHLQA---------------R---NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAA 252 (409)
Q Consensus 195 ~~~~~-v~ar~~P~~K~~iV~~lq~---------------~---g~~v~~iGDG~ND~~aLk~Ad-vG-Ia~~-~~~~~a 252 (409)
.++.+ +|.|..|..-.+|+..++. . ....+++||++.|+.||+.+. -| +|++ |+.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 33333 6788777655555544432 2 123688999999999999885 33 7776 788888
Q ss_pred hhccCEEecCCChhhHHHHHHH
Q 015327 253 RSAADIVLTEPGLNVIITAVLI 274 (409)
Q Consensus 253 ~~aaDivl~~~~l~~i~~~i~~ 274 (409)
...||+.+..++...+..+|..
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8999999999999888888765
No 118
>PRK06769 hypothetical protein; Validated
Probab=96.96 E-value=0.0026 Score=56.92 Aligned_cols=96 Identities=9% Similarity=0.018 Sum_probs=60.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHH--------HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccc
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 200 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v 200 (409)
+.|++.++++.|++.|+++.++|+.... ......+..|+..-. .+....+++ ..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~-----------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LCPHKHGDG-----------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-ECcCCCCCC-----------------CC
Confidence 6899999999999999999999987631 122223344542100 000000000 01
Q ss_pred eeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 201 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 201 ~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
..+-.|+-=..+++.+....+.|+||||..+|+.+-+.|++-
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 223334444556666655556799999999999999999975
No 119
>PTZ00174 phosphomannomutase; Provisional
Probab=96.91 E-value=0.00078 Score=63.82 Aligned_cols=58 Identities=26% Similarity=0.399 Sum_probs=48.3
Q ss_pred ecCH--hhHHHHHHHHHhCCCEEEEEcC----CcCCHHHHhhC-CeeEEeccchHHHhhccCEEe
Q 015327 203 GVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 260 (409)
Q Consensus 203 r~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~A-dvGIa~~~~~~~a~~aaDivl 260 (409)
.+.| .+|..-++.|.+....|+++|| |.||.+||+.| -.|++++++++..+..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 5799999999887788999999 99999999987 688888899998888776543
No 120
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.89 E-value=0.0018 Score=57.83 Aligned_cols=94 Identities=13% Similarity=0.155 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.+... ...+..|+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~~-----------------~~~kp~~~ 146 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADEV-----------------KEGKPHPE 146 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhhC-----------------CCCCCChH
Confidence 68999999999999999999999987 5566777777874211 011110000 01111121
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+.+.+......+++|||+.+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11223333333345699999999999999999875
No 121
>PLN02940 riboflavin kinase
Probab=96.89 E-value=0.0032 Score=63.63 Aligned_cols=116 Identities=20% Similarity=0.202 Sum_probs=75.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHH-HhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
++.|++.+.++.|++.|+++.++|+.....+..... ..|+.... ..++.+++ ....+-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~-----------------v~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDE-----------------VEKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhh-----------------cCCCCCCH
Confidence 578999999999999999999999998887776554 56663211 11111100 01122333
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEecc--chHHHhhccCEEecC
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTE 262 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~--~~~~a~~aaDivl~~ 262 (409)
+-=..+++.+.-..+.|+||||+.+|+.+-+.|++. |++.. ........+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 433455566655567899999999999999999976 44432 223333457777643
No 122
>PRK09449 dUMP phosphatase; Provisional
Probab=96.87 E-value=0.0045 Score=57.30 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=76.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++.|+ .|+++.++|+.....+...-+.+|+.... . .++.+.+. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECcc-----------------CCCCCCHH
Confidence 47899999999999 68999999998888888877888874211 0 01110000 01122232
Q ss_pred hHHHHHHHHHhC-CCEEEEEcCCc-CCHHHHhhCCee-EEec-cchH-HHhhccCEEecCCChhhHHHHH
Q 015327 208 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 208 ~K~~iV~~lq~~-g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~-~~~~-~a~~aaDivl~~~~l~~i~~~i 272 (409)
-=..+++.+.-. ...|++|||+. +|+.+-+.|++- |.+. .+.. .....+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 223444544432 35799999998 699999999985 4443 2211 11124678774 476666544
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.72 E-value=0.0028 Score=56.40 Aligned_cols=112 Identities=14% Similarity=0.049 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
.++|+-++.++.+++.++.++++|+-.......+-..++=....+...+...+..-+ ... .-.++-. .......
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih-~dg--~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIH-IDG--QHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEc-CCC--ceeeecC---CccccCC
Confidence 589999999999999999999999988777777766655111111111111110000 000 0000000 1122235
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 245 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 245 (409)
+|...|+.+.+....+.++|||+.|+.|-+.+|+=+|-
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 79999999999999999999999999999988876654
No 124
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.65 E-value=0.018 Score=50.67 Aligned_cols=105 Identities=13% Similarity=0.099 Sum_probs=65.9
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHH---HHHHHh---CCCCCCCCCcccc-CcchhhhhhcCChhHHhhhc
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---GMGTNMYPSSALS-GQDRDESIVALPVDELIEKA 198 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~l---gi~~~~~~~~~l~-g~~~~~~~~~~~~~~~~~~~ 198 (409)
+|.+.+++.++++++++.|++++++||+....+. .....+ |..- ....++. +........ .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~l--p~g~li~~~g~~~~~~~---------~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNL--PHGPVLLSPDRLFAALH---------R- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccC--CCceEEEcCCcchhhhh---------c-
Confidence 4678999999999999999999999999988774 444442 2110 0111111 111100000 0
Q ss_pred cceeecCHhhHHHHHHHHHh-----CCCEEEEEcCCcCCHHHHhhCCee
Q 015327 199 DGFAGVFPEHKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 199 ~v~ar~~P~~K~~iV~~lq~-----~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
.+..+-.-+.|...++.+.+ ....++.+|++.+|+.+-++++|.
T Consensus 93 e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11112222347777777765 356788899999999999998764
No 125
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.56 E-value=0.0045 Score=54.80 Aligned_cols=97 Identities=10% Similarity=0.013 Sum_probs=59.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCc---------------HHHHHHHHHHhCCCCCCCCCcccc----Ccchhhhhhc
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALS----GQDRDESIVA 188 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~---------------~~ta~~ia~~lgi~~~~~~~~~l~----g~~~~~~~~~ 188 (409)
++-|++.++|+.|++.|+++.++|.-. ...+..+...+|+. +...++. ..+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCC------
Confidence 467999999999999999999999742 33455666777773 1101000 0000
Q ss_pred CChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEE
Q 015327 189 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 244 (409)
Q Consensus 189 ~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 244 (409)
.+..-.|+-=..+++.+......++||||+.+|+.+-+.+++-..
T Consensus 100 -----------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -----------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -----------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 011111222223333333334569999999999999999997633
No 126
>PLN02811 hydrolase
Probab=96.53 E-value=0.0076 Score=55.83 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHH-HHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
++.|++.++|+.|++.|+++.++||-....... ..+..++.. .+ ..++.+.+.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 478999999999999999999999987653322 222223311 00 0111111000 00111222
Q ss_pred hhHHHHHHHHH---hCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 207 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 207 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
+-=...++.+. -..+.|++|||+..|+.+-+.|++-
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 22234445553 3346799999999999999999976
No 127
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.53 E-value=0.012 Score=52.63 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=67.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHH---------------HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhH
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 193 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~---------------ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~ 193 (409)
+.|++.++|+.|++.|+++.++|.-... ....+....|+.-. ........... ...
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~~~~~~~~~------~~~ 97 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD---GIYYCPHHPEG------VEE 97 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc---EEEECCCCCcc------ccc
Confidence 5789999999999999999999976631 11122223333200 00000000000 000
Q ss_pred HhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee--EEeccch---HHHhhccCEEecCCChhhH
Q 015327 194 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVADAT---DAARSAADIVLTEPGLNVI 268 (409)
Q Consensus 194 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~~~---~~a~~aaDivl~~~~l~~i 268 (409)
......+.+-.|+-=..+.+.+.-....++||||..+|+.+-+.|++. |.+..+. ......+|+++.+ +..+
T Consensus 98 -~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~--~~el 174 (176)
T TIGR00213 98 -FRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS--LADL 174 (176)
T ss_pred -ccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc--HHHh
Confidence 000000112233333344444444456799999999999999999985 3443221 1122348888843 5443
No 128
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.52 E-value=0.0052 Score=53.28 Aligned_cols=99 Identities=15% Similarity=0.141 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcH---------------HHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 192 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~ 192 (409)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+.... .........+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~-------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPAD-------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCCC--------
Confidence 4789999999999999999999998762 3445566677763110 0000000000
Q ss_pred HHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 193 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 193 ~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
......-.|+-=..+++.+.-..+.|+||||...|+.+-+.+++-
T Consensus 96 -----~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 -----NCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000111122222334444444456799999999999999999875
No 129
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.49 E-value=0.0073 Score=54.96 Aligned_cols=95 Identities=15% Similarity=0.101 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
.+.|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+ ..+.+-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~-----------------~~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYE-----------------VGAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecc-----------------cCCCCCCHH
Confidence 57899999999999999999999986553 45666677763211 01110000 001122332
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee
Q 015327 208 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG 242 (409)
-=..+++.+.-....|++|||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22334455544456799999997 899999998863
No 130
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.43 E-value=0.0064 Score=52.68 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=60.6
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
..+..+++.+.++.|++.|+++.++|+-....+....+.. +... .. .++... ....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~-~i~~~~------------------~~~~Kp~ 120 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FD-LILGSD------------------EFGAKPE 120 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-Cc-EEEecC------------------CCCCCcC
Confidence 3345689999999999999999999999988888777765 3211 11 111000 0112223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCC
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 240 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad 240 (409)
|+-=..+++.+.-.. .|++|||..+|+.+-+.|+
T Consensus 121 ~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 333334444444445 7999999999999888764
No 131
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.36 E-value=0.014 Score=52.24 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=70.9
Q ss_pred eEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCC-cHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhh
Q 015327 118 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 196 (409)
Q Consensus 118 ~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 196 (409)
.......-.-++.|++.+.++.|++.|+++.++|+- ....+..+...+|+..... ...+.....
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 344555555678999999999999999999999976 8888888888888741000 000000000
Q ss_pred hccceeecCHhhH--HHHHHHHHhC------CCEEEEEcCCcCCHHHHhhCCeeEEe
Q 015327 197 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 245 (409)
Q Consensus 197 ~~~v~ar~~P~~K--~~iV~~lq~~------g~~v~~iGDG~ND~~aLk~AdvGIa~ 245 (409)
. .+.+.-.+..| ..+.+.+.+. ...|+||||...|+.+-+.|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 01111111112 2344544432 35699999999999999999976543
No 132
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.31 E-value=0.011 Score=52.73 Aligned_cols=88 Identities=9% Similarity=0.034 Sum_probs=61.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCc-HHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
..+.|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... . -...-.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~---------------------~~~KP~ 93 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------P---------------------HAVKPP 93 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------c---------------------CCCCCC
Confidence 3578999999999999999999999987 5666777777776310 0 001122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 242 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG 242 (409)
|+-=..+++.+......|+||||.. .|+.+-+.|++-
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2222333444443456699999998 799999999974
No 133
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.12 E-value=0.014 Score=54.78 Aligned_cols=105 Identities=21% Similarity=0.184 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHH--HhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 128 PPIHDSAETIRRA--LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 128 ~lr~~~~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
|+.|+.++.++.+ +..|+.+.++|--+...-..+-+.-|+.... ..++.+...-+.-..+.+. .-..+.|.+|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~--pyh~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVR--PYHSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEe--CccCCCCCcCC
Confidence 5788999999999 5689999999999999999999999985321 1122211100000000000 00112344555
Q ss_pred H-hhHHHHHHHHHhC----C---CEEEEEcCCcCCH-HHH
Q 015327 206 P-EHKYEIVKHLQAR----N---HICGMIGNGVNDA-PAL 236 (409)
Q Consensus 206 P-~~K~~iV~~lq~~----g---~~v~~iGDG~ND~-~aL 236 (409)
| -=|..+++.+... | ..|.+||||.||. |++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 4 3699999888764 3 6899999999994 444
No 134
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.98 E-value=0.0081 Score=52.24 Aligned_cols=97 Identities=13% Similarity=-0.045 Sum_probs=64.5
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
.-++||++.+.++.|+ .++++.++|.-....+..+.+.+++.... ...++.+.+.. +..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d~~-------------------~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDECV-------------------FVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECcccc-------------------ccC
Confidence 3457999999999998 57999999999999999999988874311 11112111110 111
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEE
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 244 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 244 (409)
|. =...++.+......|++|||..+|..+-+.++|-|.
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 21 011133333446689999999999998877766554
No 135
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.90 E-value=0.043 Score=62.52 Aligned_cols=130 Identities=15% Similarity=0.131 Sum_probs=84.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
.+.|++.+.++.|+++|+++.++|+-....+..+.+.+|+....+. .++...+. ...+-.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~-----------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAF-----------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECccc-----------------ccCCCCHH
Confidence 4689999999999999999999999999988888888888421111 11111100 01122333
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee-EEecc---chHHHhhccCEEecCCChhhHHHHHHHH
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD---ATDAARSAADIVLTEPGLNVIITAVLIS 275 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~---~~~~a~~aaDivl~~~~l~~i~~~i~~g 275 (409)
-=..+++.+.-....|++|||..+|+.+-+.|++- |++.. ..+.....+|+++.+-.--.+..++..|
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 33455666665567899999999999999999974 44432 2233345678888553323344444433
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.86 E-value=0.028 Score=53.80 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=59.8
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHH---HHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcccee
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 202 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 202 (409)
..++-|++.+.++.|++.|+++.++|+..... .....+..|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 55688999999999999999999999987433 3455566777431111 1122
Q ss_pred ecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHh
Q 015327 203 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 237 (409)
Q Consensus 203 r~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk 237 (409)
+-....|..-.+.+.+...+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 21223455566666666778999999999986543
No 137
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=95.86 E-value=0.0086 Score=55.33 Aligned_cols=97 Identities=12% Similarity=0.161 Sum_probs=63.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
-++.|++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+. ...+..|
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~-----------------~~~KP~p 145 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDI-----------------QRWKPDP 145 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhc-----------------CCCCCCh
Confidence 35678999999988 5999999999888888877778874321 0111111100 0112223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEE
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 244 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 244 (409)
+-=..+.+.+.-....|++|||..+|+.+-+.|++.+.
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 33344445554445669999999999999999998764
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.71 E-value=0.11 Score=48.77 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=38.0
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHH--HHHHHhCCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 168 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~lgi~ 168 (409)
|.+.-...+-|++.++++.|+++|+++.++|.-...... ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555666788999999999999999999999996554333 455777874
No 139
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.64 E-value=0.016 Score=54.65 Aligned_cols=65 Identities=20% Similarity=0.219 Sum_probs=47.5
Q ss_pred cCHhhHHHHHHHHHhC----CCEEEEEcCCcCCHHHHhhC--------CeeEEeccchHHHhhccCEEecCCChhhHHHH
Q 015327 204 VFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITA 271 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~A--------dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 271 (409)
..+.+|...++.+.+. ...++++||+.||.+|++.+ ..||.|+.+. .+..|++++. +...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 3456788888776654 34799999999999999999 4788885332 3567899885 46666655
Q ss_pred H
Q 015327 272 V 272 (409)
Q Consensus 272 i 272 (409)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 5
No 140
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.60 E-value=0.046 Score=46.28 Aligned_cols=93 Identities=10% Similarity=0.071 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCC-cHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
++.+++.+.++.|++.|+++.++|+. ....+..+.+..+.. ..+. + +.+.... .+++.-.|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~-----~~i~-~-----------l~~~f~~-~~~~~~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF-----GIIF-P-----------LAEYFDP-LTIGYWLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc-----ccch-h-----------hHhhhhh-hhhcCCCc
Confidence 68999999999999999999999999 777777776666510 0000 0 0000000 01111122
Q ss_pred --hhHHHHHHHHH--hCCCEEEEEcCCcCCHHHHhh
Q 015327 207 --EHKYEIVKHLQ--ARNHICGMIGNGVNDAPALKK 238 (409)
Q Consensus 207 --~~K~~iV~~lq--~~g~~v~~iGDG~ND~~aLk~ 238 (409)
+.=..+++.+. -....|+||||...|...++.
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 22233445554 445789999999999877664
No 141
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.57 E-value=0.1 Score=48.03 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=33.8
Q ss_pred chHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 132 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 132 ~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
.+.+.+.+|+++|+.|+.+|..........-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999985
No 142
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.54 E-value=0.043 Score=51.09 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=66.7
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhC---CCCCCCCCccccCcchhhhhhcCChhHHhhhccce
Q 015327 125 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 201 (409)
Q Consensus 125 l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lg---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 201 (409)
+.-++.||+.++++.|++.|+++.++|..+......+-+..+ +... +. .... ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~--------------~~fd-~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS--------------GYFD-TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc--------------eEEE-eCcc
Confidence 345799999999999999999999999988776666555442 2110 00 0000 0111
Q ss_pred eecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 015327 202 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 245 (409)
Q Consensus 202 ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 245 (409)
..-.|+-=..+++.+.-....++++||...|+.+-+.|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 22233333455666655567799999999999999999986433
No 143
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.49 E-value=0.034 Score=55.48 Aligned_cols=101 Identities=10% Similarity=-0.008 Sum_probs=59.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCC---------------cHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCCh
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 191 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~ 191 (409)
-++.|++.++++.|++.|+++.++|+- ....+..+.+..|+. +....+......
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~s-------- 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPE-------- 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCc--------
Confidence 468999999999999999999999983 123345566666662 100111000000
Q ss_pred hHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeE
Q 015327 192 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 243 (409)
Q Consensus 192 ~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 243 (409)
+ . ..+....|.-=..+.+.+......++||||+.+|..+-+.|++-.
T Consensus 98 d----~-~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 98 D----N-CSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred c----c-CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 0 001111222212233333333477999999999999999999863
No 144
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.39 E-value=0.054 Score=48.10 Aligned_cols=94 Identities=6% Similarity=0.000 Sum_probs=58.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHH------------HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhh
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 196 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 196 (409)
+-|++.++++.|++.|+++.++|..... ....+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~--------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA--------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC---------------
Confidence 4599999999999999999999975542 3456677777731 01111100
Q ss_pred hccceeecCHhhHHHHHHHHH--hCCCEEEEEcCCc--------CCHHHHhhCCeeE
Q 015327 197 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 243 (409)
Q Consensus 197 ~~~v~ar~~P~~K~~iV~~lq--~~g~~v~~iGDG~--------ND~~aLk~AdvGI 243 (409)
..+..-.|+-=..+++.+. -....++||||.. +|+.+-+.|++-.
T Consensus 104 --~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 --GLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred --CCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011112222233444443 2346799999986 6999988888643
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.23 E-value=0.064 Score=50.13 Aligned_cols=89 Identities=18% Similarity=0.274 Sum_probs=56.2
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHH---HHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcccee
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 202 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 202 (409)
.-|+-|++.+.++.|++.|++|+++||+.... ...--++.|+.. ....++.+.+. -.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d------------------~~ 177 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLED------------------SN 177 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCC------------------CC
Confidence 45888999999999999999999999999755 333334566642 11111111000 00
Q ss_pred ecCHhhHHHHHHHHHhCC-CEEEEEcCCcCCHH
Q 015327 203 GVFPEHKYEIVKHLQARN-HICGMIGNGVNDAP 234 (409)
Q Consensus 203 r~~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~ 234 (409)
...-.-|.+.-+.+.+.| .+++.+||-.+|..
T Consensus 178 ~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 178 KTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred chHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001122666666666664 57888999999863
No 146
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.19 E-value=0.02 Score=52.50 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=57.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHH--HHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeec
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 204 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~ 204 (409)
-++.|++.+.++.|++.|+++.++|...... ........++.... . .++...+ ....+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEEEeee-----------------cCCCCC
Confidence 3578999999999999999999999865432 22222223331100 0 0000000 001122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 205 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 205 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
.|+-=..+++.+.-....|+||||...|+.+-+.|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 33333344455544456799999999999999999975
No 147
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.15 E-value=0.19 Score=55.98 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=31.7
Q ss_pred CCCcchHHHHHHH-HhCCCcEEEeCCCcHHHHHHHHHH
Q 015327 128 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 128 ~lr~~~~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~~ 164 (409)
.+.+++.+++++| .+.|+.|+++||+...+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 788999999999999988877654
No 148
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.11 E-value=0.15 Score=44.94 Aligned_cols=108 Identities=11% Similarity=0.203 Sum_probs=73.7
Q ss_pred HHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccC-CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHH
Q 015327 86 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD-PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 86 ~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d-~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~ 164 (409)
..+.+..+|.|.+.+=..+ ++ ++..+ ..-|++.+=+..++.+|+++.++|..+..-+...+..
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TL---v~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TL---VPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ce---ecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4567889999998875433 11 22222 3567788889999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeec-CHhhHHHHHHHHH---hCCCEEEEEcCCc-CCHHHHhhC
Q 015327 165 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV-FPEHKYEIVKHLQ---ARNHICGMIGNGV-NDAPALKKA 239 (409)
Q Consensus 165 lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~-~P~~K~~iV~~lq---~~g~~v~~iGDG~-ND~~aLk~A 239 (409)
+|++- ..+. .|-- ..+-+.++ -..+.|+||||-. .|+-+=..+
T Consensus 83 l~v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~ 130 (175)
T COG2179 83 LGVPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRA 130 (175)
T ss_pred cCCce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhccccc
Confidence 99841 1111 1221 23344444 4466799999975 477666666
Q ss_pred Ce
Q 015327 240 DI 241 (409)
Q Consensus 240 dv 241 (409)
++
T Consensus 131 G~ 132 (175)
T COG2179 131 GM 132 (175)
T ss_pred Cc
Confidence 54
No 149
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.95 E-value=0.068 Score=52.61 Aligned_cols=95 Identities=15% Similarity=0.066 Sum_probs=67.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHH----hCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
++.+++.++|+.|++.|+.+.++|.-+...+..+.+. +|+.... ....+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f------------------------~~~~~~~~ 86 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF------------------------DARSINWG 86 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe------------------------eEEEEecC
Confidence 4578999999999999999999999999999998887 6653110 00000111
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 246 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 246 (409)
..|+.=..+.+.+.-....++||||...|+.+.+.+...+.+-
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2223333344444434578999999999999999998876554
No 150
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.42 E-value=0.077 Score=48.21 Aligned_cols=96 Identities=7% Similarity=-0.026 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHH-hCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
++.|++.++++.|++.|+++.++|.-+.......... .++.... . .++...+ .....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~-----------------~~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQD-----------------LGMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEecc-----------------cCCCCCCH
Confidence 4789999999999999999999999776543332211 2221100 0 0000000 00112223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
+-=..+++.+......+++|||...|+.+-+.+++-
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGIT 180 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCE
Confidence 222344555555566799999999999999999985
No 151
>PLN02580 trehalose-phosphatase
Probab=94.25 E-value=0.095 Score=52.76 Aligned_cols=68 Identities=24% Similarity=0.229 Sum_probs=48.7
Q ss_pred ecCHh---hHHHHHHHHHhC-C-----C-EEEEEcCCcCCHHHHhh-----CCeeEEeccchHHHhhccCEEecCCChhh
Q 015327 203 GVFPE---HKYEIVKHLQAR-N-----H-ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLNV 267 (409)
Q Consensus 203 r~~P~---~K~~iV~~lq~~-g-----~-~v~~iGDG~ND~~aLk~-----AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 267 (409)
++.|. +|...|+.+.+. + . .++++||+.||..||+. +++||+|+++.. ...|++.+.+ -..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~--~t~A~y~L~d--p~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK--ESNAFYSLRD--PSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC--CccceEEcCC--HHH
Confidence 44553 899888887654 2 1 25899999999999996 689999987543 2367888844 666
Q ss_pred HHHHHHH
Q 015327 268 IITAVLI 274 (409)
Q Consensus 268 i~~~i~~ 274 (409)
+...+..
T Consensus 369 V~~~L~~ 375 (384)
T PLN02580 369 VMEFLKS 375 (384)
T ss_pred HHHHHHH
Confidence 6665543
No 152
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.89 E-value=0.14 Score=45.73 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=62.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhh
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 208 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 208 (409)
+-| ..+++..|++. +++.++||.....+....+.+|+.... ..++...+. ...+-.|+-
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~ 147 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDT 147 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHH
Confidence 345 46899999865 899999999999999999999885321 111111100 012223333
Q ss_pred HHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 209 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 209 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
=..+.+.++.....|++|||..+|+.+-+.|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 3444555554455699999999999999999975
No 153
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.84 E-value=0.099 Score=46.73 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=64.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.+++.++++.|+ .+++++|+-....+..+.+.+|+.... . .++...+... ...+++-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~-------------~~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDTANP-------------DYLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeecccC-------------ccCCCCCCHH
Confidence 47789999999987 479999999988888998998884311 1 1111110000 0001123333
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-=..+++.+......++||||...|+.+-+.|++.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 33455666665667899999999999999998875
No 154
>PLN03017 trehalose-phosphatase
Probab=93.82 E-value=0.4 Score=47.94 Aligned_cols=63 Identities=21% Similarity=0.202 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHhC-------CCEEEEEcCCcCCHHHHhhC-----CeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 207 EHKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 207 ~~K~~iV~~lq~~-------g~~v~~iGDG~ND~~aLk~A-----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
.+|...++.|-+. +..++++||...|-.||+.. ++||.+|.... ..+|++.+ ++...+...+.
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHHH
Confidence 3888888877653 23689999999999999866 46777774221 25678888 44666665553
No 155
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.65 E-value=0.35 Score=45.82 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=39.8
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCC---CcHHHHHHHHHHhCCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 168 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~lgi~ 168 (409)
|++.-.+.+-|++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55556677778999999999999999999996 6677777777788874
No 156
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=93.44 E-value=0.42 Score=44.05 Aligned_cols=111 Identities=16% Similarity=0.184 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCC-cEEEeCCCcHHHHHHHHHHhCCCCCC-----CCCccccCcchhhhhhcCChhHHhhhccce
Q 015327 128 PPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNM-----YPSSALSGQDRDESIVALPVDELIEKADGF 201 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~lgi~~~~-----~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 201 (409)
|+-|+..++|+.+++.|- .++++|--|.-....+-+..|+..-. .|..+-....+. +.... ..+-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~--v~pyH------~~hsC 155 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLL--VRPYH------TQHSC 155 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEE--eecCC------CCCcc
Confidence 577899999999999997 99999999988888888887773210 011110000000 00000 00224
Q ss_pred eecCHh-hHHHHHHHHHhC-------CCEEEEEcCCcCC-HHHHhhCCeeEEec
Q 015327 202 AGVFPE-HKYEIVKHLQAR-------NHICGMIGNGVND-APALKKADIGIAVA 246 (409)
Q Consensus 202 ar~~P~-~K~~iV~~lq~~-------g~~v~~iGDG~ND-~~aLk~AdvGIa~~ 246 (409)
.+|.|. -|..++..++.. ...+.++|||.|| +|+++...--++|-
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 444332 366666665532 2279999999999 67777766666664
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=92.65 E-value=0.32 Score=47.64 Aligned_cols=47 Identities=26% Similarity=0.308 Sum_probs=38.9
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHH---HHhCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGM 167 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~lgi 167 (409)
|++.-.+.+-|++.++|+.|++.|++++++|+....+...+. +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 566666778899999999999999999999999977766666 45666
No 158
>PHA02597 30.2 hypothetical protein; Provisional
Probab=91.46 E-value=0.45 Score=42.91 Aligned_cols=90 Identities=10% Similarity=0.067 Sum_probs=53.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCC--CCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
++.|++.++++.|++.+ +.+++|.-+.......-+.+++..-. +-..+ +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccC
Confidence 47999999999999875 56777765544444344555553110 00011 111111
Q ss_pred ---HhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhC--CeeE
Q 015327 206 ---PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA--DIGI 243 (409)
Q Consensus 206 ---P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A--dvGI 243 (409)
|+--..+++.+. ...+++|||..+|+.+-+.| |+-.
T Consensus 130 ~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 221122333333 35688999999999999999 9863
No 159
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=91.36 E-value=0.64 Score=43.19 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=72.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 206 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P 206 (409)
-++.|++.+.++.|+..|+.+.+.|+-....+..+...+|+.... ..++.+.+.. -.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 478999999999999999999999999999999999999985321 1111111110 113344
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCee
Q 015327 207 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
+-=....+.|.-....|+.|.|..|.+.+-+.|+.-
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCE
Confidence 544666677666677899999999999999999965
No 160
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.04 E-value=0.87 Score=40.52 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=74.5
Q ss_pred HHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCc--EEEeCCC-------cHHHHHH
Q 015327 90 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 160 (409)
Q Consensus 90 ~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~--v~mlTGD-------~~~ta~~ 160 (409)
+.+.|.|.+.+=... ++ ...-++.+.|+..+.+++|++.+.. |+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888775432 10 1234567889999999999998875 9999886 4788999
Q ss_pred HHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhC-----CCEEEEEcCCc-CCHH
Q 015327 161 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 234 (409)
Q Consensus 161 ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~v~~iGDG~-ND~~ 234 (409)
+.+.+|+.- -.+....|.-..++.+.++.. .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999831 012234565556778888754 56799999953 4665
Q ss_pred HHhhCC
Q 015327 235 ALKKAD 240 (409)
Q Consensus 235 aLk~Ad 240 (409)
|=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 555444
No 161
>PLN02423 phosphomannomutase
Probab=90.87 E-value=0.37 Score=45.52 Aligned_cols=43 Identities=23% Similarity=0.285 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHhCCCEEEEEcC----CcCCHHHHhh-CCeeEEeccchH
Q 015327 207 EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATD 250 (409)
Q Consensus 207 ~~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~-AdvGIa~~~~~~ 250 (409)
.+|..-++.|+ ....|+++|| |.||.+||+. -=.||.+.+-.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 47999999999 7788999999 8999999997 667899875444
No 162
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=90.27 E-value=0.79 Score=42.94 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=54.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++-|++.++++.|++. +++.++|..+... ...|+.... . .++...+. ...+-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~~~~~~-----------------~~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVLRAGPH-----------------GRSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeEecccC-----------------CcCCCcHH
Confidence 5778999999999875 8999999866531 445552110 0 00000000 00111222
Q ss_pred hHHHHHHHHHhCCCEEEEEcCC-cCCHHHHhhCCeeEE
Q 015327 208 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIA 244 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa 244 (409)
-=..+++.+.-....|+||||. ..|+.+-+.|++-..
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 2233344444445679999999 599999999997644
No 163
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=90.06 E-value=0.16 Score=41.18 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.8
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHH---HHhCCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 168 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~lgi~ 168 (409)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455567888999999999999999999999998866555544 456663
No 164
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.43 E-value=0.58 Score=43.85 Aligned_cols=90 Identities=22% Similarity=0.212 Sum_probs=56.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHH---HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
+++=|++.+.++.+++.|++|+.+||+... ....-.++.|+... ...++.+.... -..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~ 174 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKK 174 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS-
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------ccc
Confidence 466788999999999999999999999864 33333455665321 11111110000 000
Q ss_pred cCHhhHHHHHHHHHhCC-CEEEEEcCCcCCHHH
Q 015327 204 VFPEHKYEIVKHLQARN-HICGMIGNGVNDAPA 235 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g-~~v~~iGDG~ND~~a 235 (409)
...+-|...-+.+++.| ++++.+||-.+|..-
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 11234777888888884 578889999999875
No 165
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=87.85 E-value=5.9 Score=41.51 Aligned_cols=100 Identities=16% Similarity=0.077 Sum_probs=62.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHH-hCCCCCCCCCccccCcchhhhhhcCChhHHhhhcc-cee---e
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD-GFA---G 203 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-v~a---r 203 (409)
+++++.+ .++++|. ++++|+-....+..+|++ +|++.- .|.+++... +. ... .+. .
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~V-------IgTeLev~~-----~G---~~TG~i~g~~~ 171 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKV-------LGTELEVSK-----SG---RATGFMKKPGV 171 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEE-------EecccEECc-----CC---EEeeeecCCCC
Confidence 6666555 4456774 599999999999999987 788521 111110000 00 000 011 1
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEecc
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 247 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 247 (409)
|.-++|..-++..........+.||+.||.|||+.|+-+..++.
T Consensus 172 c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 172 LVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 34567877776432211223789999999999999999999985
No 166
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.33 E-value=2.3 Score=38.92 Aligned_cols=125 Identities=15% Similarity=0.177 Sum_probs=74.6
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecC
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 205 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~ 205 (409)
.=++-+++.++++.++.. +++.++|--.........+++||... +...++.+. ..++...
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~------------------~g~~KP~ 156 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED------------------VGVAKPD 156 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc------------------cccCCCC
Confidence 346788889999999888 99999999888888888899997432 111111110 0122333
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-cCCHHHHhhCCee-EEeccchH---HHhhccCEEecCCChhhHHHHH
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVADATD---AARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvG-Ia~~~~~~---~a~~aaDivl~~~~l~~i~~~i 272 (409)
|+-=..+.+.+......++||||. .||+..-+.+|+- |-+..... ......++.+.+ +..+..++
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISS--LAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcC--HHHHHHHH
Confidence 333344555555556789999995 4564666666653 44442211 111455666633 65555544
No 167
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=87.29 E-value=0.67 Score=40.79 Aligned_cols=85 Identities=15% Similarity=0.075 Sum_probs=54.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHh
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 207 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~ 207 (409)
++.|++.++++ ++.++|.-+........+.+|+.... ..++.+.+ ....+-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-----------------~~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-----------------VRAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-----------------cCCCCCCHH
Confidence 58899999998 37889998888888888888874211 00111100 012223333
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhh
Q 015327 208 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 238 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~ 238 (409)
-=..+.+.+.-....|+||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 3345556665556779999999999887654
No 168
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.80 E-value=0.99 Score=42.94 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=67.9
Q ss_pred CcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhH
Q 015327 130 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 209 (409)
Q Consensus 130 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 209 (409)
-++..++++.|++.++.+.+.|+.............|+.. -.. .+.. ..-.....+..-.|.-=
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~-----------~~~-~i~~----~~~~~~~~~gKP~p~~~ 185 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP-----------FVT-ALEY----ATDTKATVVGKPSKTFF 185 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH-----------HHH-HHHH----HhCCCceeecCCCHHHH
Confidence 4677888999999899999998765433222221112110 000 0000 00000112333444433
Q ss_pred HHHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee-EEeccc--h-H---HHhhccCEEecCCChhhHHHHH
Q 015327 210 YEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVADA--T-D---AARSAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 210 ~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~~--~-~---~a~~aaDivl~~~~l~~i~~~i 272 (409)
..+++.+......++||||.. +|+.+-+.+++- |.+..+ . . .....+|+++ +++..+...|
T Consensus 186 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~l 254 (257)
T TIGR01458 186 LEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDLI 254 (257)
T ss_pred HHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHHH
Confidence 445555555567899999996 899999999865 444322 1 1 1123467777 4466665543
No 169
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=86.17 E-value=3.5 Score=39.56 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=52.6
Q ss_pred cCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHH---HHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcccee
Q 015327 126 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 202 (409)
Q Consensus 126 ~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 202 (409)
+.|.=|++.+..+.+++.|++|+++||+....-..+. ++.|+... ...++.+.... -.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~--~~LiLR~~~D~-----------------~~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW--EKLILKDPQDN-----------------SA 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc--ceeeecCCCCC-----------------cc
Confidence 5677889999999999999999999999864322222 33566321 11111111000 00
Q ss_pred ecCHhhHHHHHHHHHhC-CCEEEEEcCCcCCH
Q 015327 203 GVFPEHKYEIVKHLQAR-NHICGMIGNGVNDA 233 (409)
Q Consensus 203 r~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~ 233 (409)
....+-|...-+.+.+. ..+++.+||-.+|.
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 01113354444444455 45788899999997
No 170
>PRK10444 UMP phosphatase; Provisional
Probab=85.97 E-value=0.81 Score=43.38 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=40.1
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHh
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 165 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~l 165 (409)
|++.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 667777888999999999999999999999999998888877765
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=85.73 E-value=1 Score=42.87 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=37.3
Q ss_pred EEEeccCC----CCcchHHHHHHHHhCCCcEEEeCCCcHHHH---HHHHHHhCCC
Q 015327 121 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRRLGMG 168 (409)
Q Consensus 121 G~i~l~d~----lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta---~~ia~~lgi~ 168 (409)
|++.-.+. +-|++.++|+.|++.|++++++||....+. ....+.+|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55656566 889999999999999999999999877653 3444556663
No 172
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=84.71 E-value=9 Score=33.69 Aligned_cols=102 Identities=21% Similarity=0.167 Sum_probs=66.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHH---HHHh-----CCCCCCCCCccccCcc-hhhhhhcCChhHHhhh
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALSGQD-RDESIVALPVDELIEK 197 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~i---a~~l-----gi~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~ 197 (409)
|..++++.+..+.+++.|++++-+|++..--+..+ .... +++ ++.++...+ +-..+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP----~Gpv~~sP~~l~~al~---------- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP----DGPVLLSPDSLFSALH---------- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC----CCCEEECCcchhhhhh----------
Confidence 68999999999999999999999999996443332 2222 222 122222111 000000
Q ss_pred ccceeecCHhhHHHHHHHHHhC-----CCEEEEEcCCcCCHHHHhhCCee
Q 015327 198 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 198 ~~v~ar~~P~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
-.+..+-.-+.|....+.++.. ...++..|...+|+.+.+.++|.
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0123343446788888888753 45788899999999999998875
No 173
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=83.52 E-value=1.8 Score=41.94 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=38.0
Q ss_pred CC-cchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 129 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 129 lr-~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
+| |++.++++.|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999964
No 174
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=83.39 E-value=2.9 Score=44.03 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=31.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcH------------HHHHHHHHHhCC
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGM 167 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~------------~ta~~ia~~lgi 167 (409)
+-|++.++|+.|++.|++++++|.-.. ..+..+.+.+|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999997443 335566777776
No 175
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.18 E-value=1.8 Score=39.04 Aligned_cols=103 Identities=13% Similarity=0.194 Sum_probs=56.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcc--hhhhhhcC--ChhHHhh--h-ccce
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RDESIVAL--PVDELIE--K-ADGF 201 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~--~~~~~~~~--~~~~~~~--~-~~v~ 201 (409)
+.+++.+++..|+++|++++|+|- +-|+.+..++...+.... ....+... .++.++- . -...
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~ 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDN 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCC
Confidence 578999999999999999999995 334433322221111100 00000000 0111000 0 0001
Q ss_pred eecCHhhHHHHHHHHHhCC---CEEEEEcCCcCCHHHHhhCCee
Q 015327 202 AGVFPEHKYEIVKHLQARN---HICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 202 ar~~P~~K~~iV~~lq~~g---~~v~~iGDG~ND~~aLk~AdvG 242 (409)
|.|---....+.+.+++.+ ....+|||-..|..+-..++++
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 2222222344555555543 6799999999999999999887
No 176
>PTZ00174 phosphomannomutase; Provisional
Probab=80.37 E-value=2.4 Score=40.00 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 162 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia 162 (409)
++.+.+.++|+++++.|++++++||++........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 48889999999999999999999999988665443
No 177
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=80.35 E-value=2.9 Score=40.61 Aligned_cols=41 Identities=2% Similarity=-0.141 Sum_probs=36.9
Q ss_pred CC-cchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 129 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 129 lr-~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
+| |++.+++++|+++|+++.++|+.....+..+...+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 45 899999999999999999999888888899999999953
No 178
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=78.24 E-value=4.6 Score=37.09 Aligned_cols=50 Identities=20% Similarity=0.354 Sum_probs=42.2
Q ss_pred eEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHH---HhCC
Q 015327 118 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGM 167 (409)
Q Consensus 118 ~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~---~lgi 167 (409)
.+-|++.++|..-|++.+++++|++++.+|..+|.-..++-..+.+ +||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 5679999999999999999999999999999998777665555554 5666
No 179
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=77.67 E-value=2.1 Score=37.75 Aligned_cols=44 Identities=16% Similarity=0.116 Sum_probs=38.8
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 124 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 124 ~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
.+.=..||++.+.++.|.+. +.+++.|-.....|..+...++..
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 34446899999999999987 999999999999999999988864
No 180
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=77.38 E-value=4 Score=36.53 Aligned_cols=91 Identities=26% Similarity=0.361 Sum_probs=60.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcH----HHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeec
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 204 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~ 204 (409)
|++-+++.|..-++.|=.++.+||+.. .+++.+++...|. ++.+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-------------------------eeeccC
Confidence 556668889989999999999999986 3566677766662 2221 124333
Q ss_pred CHh-hHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCe-eEEec
Q 015327 205 FPE-HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 246 (409)
Q Consensus 205 ~P~-~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~ 246 (409)
.|. .+..=...+|+. .+-..-||+-||+.|-+.|++ ||-+-
T Consensus 169 k~k~~qy~Kt~~i~~~-~~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 169 KPKPGQYTKTQWIQDK-NIRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CCCcccccccHHHHhc-CceEEecCCchhhhHHHhcCccceeEE
Confidence 330 112223445544 456778999999999999985 56653
No 181
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=76.92 E-value=10 Score=37.74 Aligned_cols=38 Identities=11% Similarity=0.074 Sum_probs=34.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHh-C
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G 166 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~l-g 166 (409)
+-|++.+.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 4679999999999999999999999999999998886 6
No 182
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=76.41 E-value=2.8 Score=35.45 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=28.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHH
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAK 159 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~ 159 (409)
+++.+++.++++.+++.|+.++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568889999999999999999999999876533
No 183
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=75.64 E-value=0.83 Score=40.66 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=31.4
Q ss_pred ccHHHHHHH-HHHhccccccchhhhHhhhHHHhhhhhccCCCC
Q 015327 308 FTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 349 (409)
Q Consensus 308 ~pl~~~~~l-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (409)
.|++++|+| .+++....|.++++.++...+.|+|+|+..+.+
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~ 44 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEP 44 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchh
Confidence 589999999 888899999999999999999999999855544
No 184
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=73.54 E-value=6.8 Score=29.39 Aligned_cols=58 Identities=26% Similarity=0.349 Sum_probs=38.1
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCC-cCCHHHHhhCCee-EEecc---chHHH---hhccCEEecC
Q 015327 205 FPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVAD---ATDAA---RSAADIVLTE 262 (409)
Q Consensus 205 ~P~~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvG-Ia~~~---~~~~a---~~aaDivl~~ 262 (409)
.|.-=..+.+.+......++||||. ..|+.+-+.+++- |.+.. ..+.. ...+|+|+.+
T Consensus 6 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 6 SPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp SHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred cHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 3433445556665555679999999 9999999999965 44432 11222 3578888743
No 185
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=72.18 E-value=22 Score=33.59 Aligned_cols=134 Identities=16% Similarity=0.170 Sum_probs=68.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCc-chhhhhhcCChhHHhhhccceee--
Q 015327 127 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ-DRDESIVALPVDELIEKADGFAG-- 203 (409)
Q Consensus 127 d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~v~ar-- 203 (409)
-.+|+++.+.++.|++.+|.+.+.|+-=.....++-++-|...+. ..++..- .+++ +.. ...|..
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N--v~VvSN~M~Fd~-------~g~---l~gF~~~l 156 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN--VKVVSNFMDFDE-------DGV---LVGFKGPL 156 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT--EEEEEE-EEE-T-------TSB---EEEE-SS-
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC--eEEEeeeEEECC-------cce---EeecCCCc
Confidence 358999999999999999999999998888888888877653211 1111100 0000 000 000100
Q ss_pred cCHhhHHH-HH---HHHHh--CCCEEEEEcCCcCCHHHHhhC---CeeEEec--cch-----HHHhhccCEEecCCChhh
Q 015327 204 VFPEHKYE-IV---KHLQA--RNHICGMIGNGVNDAPALKKA---DIGIAVA--DAT-----DAARSAADIVLTEPGLNV 267 (409)
Q Consensus 204 ~~P~~K~~-iV---~~lq~--~g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~~-----~~a~~aaDivl~~~~l~~ 267 (409)
..+-.|-+ .+ ...++ ....|+-.||..-|+.|-.-. +.-+.+| +.. +.-.++=|+|+.++.--.
T Consensus 157 IH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 157 IHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp --TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred eEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 01112221 11 12222 245699999999999998666 3444444 322 344578999999876545
Q ss_pred HHHHH
Q 015327 268 IITAV 272 (409)
Q Consensus 268 i~~~i 272 (409)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 186
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=72.06 E-value=4.1 Score=39.10 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=36.1
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHH---HHHHhCCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 168 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~---ia~~lgi~ 168 (409)
|++.-.+.+-|++.++|++|++.|++++++|+....+... --+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 5555567788899999999999999999999976443333 33456763
No 187
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=71.37 E-value=4.8 Score=38.68 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=40.1
Q ss_pred EEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHh
Q 015327 120 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 165 (409)
Q Consensus 120 lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~l 165 (409)
=|++.--+.+=|++.++|+.|+++|++++.+|.....+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4888889999999999999999999999999999887777555543
No 188
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=69.89 E-value=29 Score=33.86 Aligned_cols=65 Identities=20% Similarity=0.270 Sum_probs=42.3
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCC-cCCHH---HHhhCCeeEEecc----chHHHhhccCEEecCCC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VNDAP---ALKKADIGIAVAD----ATDAARSAADIVLTEPG 264 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG-~ND~~---aLk~AdvGIa~~~----~~~~a~~aaDivl~~~~ 264 (409)
.|.-|||.-=.++++.+.- .|+.++++|-| .---| +|..++.-+.+-+ ....+-..||+|++--+
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVG 211 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecC
Confidence 4566777766666666643 38999999997 54444 5667777766541 12334467899976533
No 189
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=62.49 E-value=6.2 Score=36.92 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=51.0
Q ss_pred CcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhH
Q 015327 130 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 209 (409)
Q Consensus 130 r~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 209 (409)
-++..++++.|++.|++. ++|......+.......|... +-..+. ..-.+...+..-.|+-=
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~------------~~~~i~-----~~g~~~~~~gKP~~~~~ 201 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY------------YAELIK-----QLGGKVIYSGKPYPAIF 201 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH------------HHHHHH-----HhCCcEecCCCCCHHHH
Confidence 478888899888889987 667755443322222222110 000000 00000011233333333
Q ss_pred HHHHHHHHhC-CCEEEEEcCC-cCCHHHHhhCCee
Q 015327 210 YEIVKHLQAR-NHICGMIGNG-VNDAPALKKADIG 242 (409)
Q Consensus 210 ~~iV~~lq~~-g~~v~~iGDG-~ND~~aLk~AdvG 242 (409)
..+.+.+... ...++||||. .+|+.+=+.|++-
T Consensus 202 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 202 HKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 3444555432 3579999999 5999999998875
No 190
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=60.96 E-value=36 Score=31.74 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=68.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhh
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 208 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 208 (409)
+-||+.+.++.|+..|+.+-++|+-+..+...--...+-..+.+...++ |.+.+-. .....|+-
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~-~d~~~v~---------------~gKP~Pdi 156 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVL-GDDPEVK---------------NGKPDPDI 156 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCee-cCCcccc---------------CCCCCchH
Confidence 4459999999999999999999999776655444333311122223333 2221100 11233333
Q ss_pred HHHHHHHHHhCC-CEEEEEcCCcCCHHHHhhCCeeEEe-cc--chHHHhhccCEEe
Q 015327 209 KYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAV-AD--ATDAARSAADIVL 260 (409)
Q Consensus 209 K~~iV~~lq~~g-~~v~~iGDG~ND~~aLk~AdvGIa~-~~--~~~~a~~aaDivl 260 (409)
=....+.+.... ..|+++.|..+-+.|-+.|+.=+-+ .+ -+......+++++
T Consensus 157 ~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~ 212 (222)
T KOG2914|consen 157 YLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLIL 212 (222)
T ss_pred HHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceec
Confidence 344455555555 7788888888888888888865433 22 3333444455554
No 191
>PLN02151 trehalose-phosphatase
Probab=60.95 E-value=20 Score=35.81 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhC-C------CEEEEEcCCcCCHHHHhhC-----CeeEEeccchHHHhhccCEEecCCChhhHHHHHH
Q 015327 208 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 273 (409)
Q Consensus 208 ~K~~iV~~lq~~-g------~~v~~iGDG~ND~~aLk~A-----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 273 (409)
+|...|+.+.+. + ..++++||...|-.||+.. ++||-++.+.. ...|++.+.+ -..+...+.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHHH
Confidence 899988887654 2 2589999999999999854 67777763221 2368888844 666665554
No 192
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=59.92 E-value=43 Score=32.09 Aligned_cols=52 Identities=19% Similarity=0.022 Sum_probs=39.4
Q ss_pred CceEEEEEeccCCCCcchHHHHHHHHhC-CCcEEEeCCCcHHHHHHHHHHhCC
Q 015327 116 PWQFIGLIPLFDPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 167 (409)
Q Consensus 116 ~l~~lG~i~l~d~lr~~~~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~lgi 167 (409)
-++-+..-....++-++..+.++.|... ...++|+||.+.........-.|+
T Consensus 28 Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 28 TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 3445555566777888999999999876 557999999999887777664444
No 193
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=59.53 E-value=42 Score=32.90 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=38.4
Q ss_pred EEEeccCCCCcchHHHHHHHHhC----CCcEEEeCCCc---HH-HHHHHHHHhCCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSL----GLGVKMITGDQ---LA-IAKETGRRLGMG 168 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~a----Gi~v~mlTGD~---~~-ta~~ia~~lgi~ 168 (409)
|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 77888899999999999999998 99999999665 33 345555777773
No 194
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.25 E-value=74 Score=30.82 Aligned_cols=63 Identities=14% Similarity=0.244 Sum_probs=40.9
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcC-CcCCHH---HHhhCCeeEEec--cch--HHHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGN-GVNDAP---ALKKADIGIAVA--DAT--DAARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGD-G~ND~~---aLk~AdvGIa~~--~~~--~~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+.- .|+.++++|- |.--.| +|..++.-+.+- ... ...-..||+|+.-
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 4667778766666666543 4899999999 655555 566666665553 222 2334679998764
No 195
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=55.98 E-value=22 Score=33.18 Aligned_cols=47 Identities=28% Similarity=0.287 Sum_probs=34.8
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeC---CCcHHHHHHHHHH-hCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRR-LGM 167 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~-lgi 167 (409)
|++.-.+.+=+++.++|+.+++.|++++++| |...........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5555567778899999999999999999998 5555444433333 565
No 196
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=55.81 E-value=20 Score=31.93 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=31.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeC-CCcHHHHHHHHHHhCCC
Q 015327 128 PPIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMG 168 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlT-GD~~~ta~~ia~~lgi~ 168 (409)
.+.|++++.++.|++.|+++.+.| -+.+..|+++-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 378999999999999999999999 57899999999999996
No 197
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=55.48 E-value=13 Score=30.70 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=45.8
Q ss_pred HHHHHHHHccCcceeeeeec--cCCC-CcCC---CCCCceEEEEEeccCCCCcchHHHHHHHHhCCCc-EEEeCCCcHHH
Q 015327 85 AVINKFAERGLRSLAVAYQE--VPEG-SKES---SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAI 157 (409)
Q Consensus 85 ~~i~~~a~~GlR~l~~a~~~--~~~~-~~~~---~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~-v~mlTGD~~~t 157 (409)
..+..+.+.|+++..+.-+. +... -+.+ ...+..++=+. -+.+.+.+.+++|.+.|++ +|+.+|...+.
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~----~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC----VPPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-----S-HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE----cCHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 45556666999998886443 1111 1111 11222221111 2556789999999999995 89999999999
Q ss_pred HHHHHHHhCC
Q 015327 158 AKETGRRLGM 167 (409)
Q Consensus 158 a~~ia~~lgi 167 (409)
+...+++.|+
T Consensus 94 ~~~~a~~~gi 103 (116)
T PF13380_consen 94 LIEAAREAGI 103 (116)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHcCC
Confidence 9999999887
No 198
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=54.97 E-value=23 Score=30.94 Aligned_cols=45 Identities=13% Similarity=-0.001 Sum_probs=38.9
Q ss_pred eccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 124 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 124 ~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
...=.+||++.+.++.|.+. +++.+.|.-....|..+.+.++...
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 33445899999999999855 9999999999999999999998753
No 199
>PTZ00445 p36-lilke protein; Provisional
Probab=54.71 E-value=29 Score=32.14 Aligned_cols=73 Identities=11% Similarity=0.121 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHccCcceeeeeecc--C--CCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCc
Q 015327 79 IGRKVNAVINKFAERGLRSLAVAYQEV--P--EGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ 154 (409)
Q Consensus 79 ~~~~~~~~i~~~a~~GlR~l~~a~~~~--~--~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~ 154 (409)
..+.....++.+.+.|.|++++=+..- + ..-+.... -....+--.++|+.+.-++.|+++||+|.++|=-.
T Consensus 27 ~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~-----~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd 101 (219)
T PTZ00445 27 PHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD-----NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSD 101 (219)
T ss_pred HHHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC-----cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 345566777889999999998755320 0 00000000 01122233479999999999999999999999655
Q ss_pred HH
Q 015327 155 LA 156 (409)
Q Consensus 155 ~~ 156 (409)
..
T Consensus 102 ~~ 103 (219)
T PTZ00445 102 KE 103 (219)
T ss_pred hh
Confidence 43
No 200
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=52.85 E-value=1.3e+02 Score=24.89 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=24.1
Q ss_pred HHHHHHHHhCCCEEEEEcCCcC--CHHHHhhCCeeEEec
Q 015327 210 YEIVKHLQARNHICGMIGNGVN--DAPALKKADIGIAVA 246 (409)
Q Consensus 210 ~~iV~~lq~~g~~v~~iGDG~N--D~~aLk~AdvGIa~~ 246 (409)
.++++.+ ..-+.+...|-|.| |..+++.-+|-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4455555 34467888999998 777888877777754
No 201
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.74 E-value=40 Score=31.75 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=61.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcc-ceeecCHh
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD-GFAGVFPE 207 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-v~ar~~P~ 207 (409)
+=++..++++.||+.|..+.++|-=... ...+-..+|+... ++.++..+. ..-.-.|.
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~--------------------fD~vv~S~e~g~~KPDp~ 172 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAY--------------------FDFVVESCEVGLEKPDPR 172 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHh--------------------hhhhhhhhhhccCCCChH
Confidence 4455669999999999888777753332 2255555555311 111111111 11222333
Q ss_pred hHHHHHHHHHhCCCEEEEEcC-CcCCHHHHhhCCe-eEEeccchHHHhh
Q 015327 208 HKYEIVKHLQARNHICGMIGN-GVNDAPALKKADI-GIAVADATDAARS 254 (409)
Q Consensus 208 ~K~~iV~~lq~~g~~v~~iGD-G~ND~~aLk~Adv-GIa~~~~~~~a~~ 254 (409)
==...++.+......|++||| ..||...-+.++. ++-+.++....+.
T Consensus 173 If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 173 IFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred HHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 335566777777778999999 6799999998885 3555554444443
No 202
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=51.15 E-value=70 Score=30.30 Aligned_cols=87 Identities=11% Similarity=0.039 Sum_probs=55.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHH----HHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceee
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAI----AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 203 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~t----a~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar 203 (409)
.+=||+.+-++..-+.|..|..+|-+..+. .+.-.++.|+.....+.. ++-+
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~------------------------llkk 177 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHL------------------------LLKK 177 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccce------------------------EEee
Confidence 356899999999999999999999988765 344455667743211111 1111
Q ss_pred cCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhC
Q 015327 204 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 239 (409)
Q Consensus 204 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 239 (409)
.-..|..--+.+++...+|+.+||..+|-......
T Consensus 178 -~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 178 -DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred -CCCcHHHHHHHHhhccceeeEecCchhhhcchhhh
Confidence 11223333344444667899999999997655443
No 203
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=50.05 E-value=20 Score=33.26 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHhC-C------CEEEEEcCCcCCHHHHhhC------CeeEEeccch-HHHhhccCEEecCC
Q 015327 207 EHKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA------DIGIAVADAT-DAARSAADIVLTEP 263 (409)
Q Consensus 207 ~~K~~iV~~lq~~-g------~~v~~iGDG~ND~~aLk~A------dvGIa~~~~~-~~a~~aaDivl~~~ 263 (409)
..|...|+.+-+. + ..++++||...|-.|++.. +++|-++..+ ..-..+|++-+.++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 4599999887765 3 3699999999999999874 4567776432 23345666666554
No 204
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=48.16 E-value=1.3e+02 Score=29.08 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=39.2
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhhCCeeEEe--ccchH--HHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAV--ADATD--AARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~AdvGIa~--~~~~~--~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+.- .|+.++.+|-+..= +.||...+.-+.+ +...+ ..-..||+++.-
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 4566777776677776653 48999999998542 3456555544444 32222 234678998764
No 205
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=46.21 E-value=68 Score=30.61 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=29.0
Q ss_pred ecCHhhHHHHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee
Q 015327 203 GVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 242 (409)
Q Consensus 203 r~~P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG 242 (409)
+-+|+-=..+++.+......|+||||.. .|+.+-+.|++-
T Consensus 202 KP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 202 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCc
Confidence 4444443445555555567899999995 999999999975
No 206
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.89 E-value=1.4e+02 Score=28.98 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=40.1
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhh------CCeeEEeccchH--HHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK------ADIGIAVADATD--AARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~------AdvGIa~~~~~~--~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.++- .|+.++.+|-+..= +.+|.. |.|-++.....+ ..-..||+++.-
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 4667788766667766653 38999999997542 335544 556565553322 345678988754
No 207
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=44.87 E-value=49 Score=29.38 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=39.9
Q ss_pred CchhHHHHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcH
Q 015327 76 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 155 (409)
Q Consensus 76 ~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 155 (409)
+-....-+...++.++..|=-.++++-. - -.+++..+|+.+++.|+.|+-+||++-
T Consensus 92 Dy~yd~vFsRqveA~g~~GDvLigISTS----------------------G--NS~nVl~Ai~~Ak~~gm~vI~ltG~~G 147 (176)
T COG0279 92 DYGYDEVFSRQVEALGQPGDVLIGISTS----------------------G--NSKNVLKAIEAAKEKGMTVIALTGKDG 147 (176)
T ss_pred cccHHHHHHHHHHhcCCCCCEEEEEeCC----------------------C--CCHHHHHHHHHHHHcCCEEEEEecCCC
Confidence 3334445556666666666555554432 2 246788999999999999999999876
Q ss_pred HHH
Q 015327 156 AIA 158 (409)
Q Consensus 156 ~ta 158 (409)
-..
T Consensus 148 G~~ 150 (176)
T COG0279 148 GKL 150 (176)
T ss_pred ccc
Confidence 433
No 208
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=44.35 E-value=16 Score=33.92 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=30.4
Q ss_pred hHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 133 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 133 ~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
..++++ +++.|+.++++||+....+..+...+++.
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 335565 68999999999999999999999999885
No 209
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.59 E-value=1.3e+02 Score=29.20 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=39.7
Q ss_pred cceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcC-C---HHHHhhCCeeEEe--ccch--HHHhhccCEEecCC
Q 015327 199 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN-D---APALKKADIGIAV--ADAT--DAARSAADIVLTEP 263 (409)
Q Consensus 199 ~v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~N-D---~~aLk~AdvGIa~--~~~~--~~a~~aaDivl~~~ 263 (409)
..|.-|||.-=.++++.++- .|+.|+.+|-|.. - +.+|...+.-+.+ .... ...-..||+++.--
T Consensus 135 ~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 135 PLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAV 209 (285)
T ss_pred CCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcC
Confidence 34566777666666666543 4899999999866 2 3455555544443 3222 23446789987643
No 210
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.14 E-value=2e+02 Score=27.83 Aligned_cols=63 Identities=17% Similarity=0.248 Sum_probs=40.2
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhhCCeeEEe--ccchH--HHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAV--ADATD--AARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~AdvGIa~--~~~~~--~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+.- .|+.++.+|-+..= +.||...+.-+.+ +...+ ..-..||+++.-
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 3567788777777777653 48999999998652 3466655554444 32222 233668998764
No 211
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.08 E-value=2e+02 Score=27.88 Aligned_cols=63 Identities=22% Similarity=0.275 Sum_probs=38.1
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhhCC--eeEEeccchH--HHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKAD--IGIAVADATD--AARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~Ad--vGIa~~~~~~--~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+.- .|+.|+.+|-+..= +.+|...+ |-++.+...+ ..-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 135 SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 3566777666666666543 48999999998542 33555444 4444443222 234678998764
No 212
>PLN02645 phosphoglycolate phosphatase
Probab=42.90 E-value=49 Score=32.23 Aligned_cols=60 Identities=10% Similarity=0.086 Sum_probs=37.5
Q ss_pred HHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee-EEe--ccch--HHHh----hccCEEecCCChhhHHHHH
Q 015327 211 EIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAV--ADAT--DAAR----SAADIVLTEPGLNVIITAV 272 (409)
Q Consensus 211 ~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~--~~~~--~~a~----~aaDivl~~~~l~~i~~~i 272 (409)
.+.+.+.-....++||||.. +|+.+-+.|++- |.+ |..+ +... ..+|+++ +++..+..++
T Consensus 238 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 238 YLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 34444444566799999997 999999999954 333 3222 2111 3478888 4466665543
No 213
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.81 E-value=1.2e+02 Score=29.47 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=39.8
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHh------hCCeeEEeccch--HHHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALK------KADIGIAVADAT--DAARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk------~AdvGIa~~~~~--~~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+.. .|+.|+.+|-+..= +.||. .|.|-++..... ...-..||+++.-
T Consensus 137 ~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 137 CFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 3556788776666666653 38999999998652 22443 355556655332 3345779998764
No 214
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.47 E-value=1.3e+02 Score=29.17 Aligned_cols=63 Identities=19% Similarity=0.238 Sum_probs=39.6
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhhCCeeEEe--ccch--HHHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAV--ADAT--DAARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~AdvGIa~--~~~~--~~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+.- .|+.|+.+|-+..= +.+|...+.-+.+ +... ...-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 4566778776777776653 48999999998652 3456555554444 3222 2234678998764
No 215
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=40.54 E-value=31 Score=28.19 Aligned_cols=79 Identities=16% Similarity=0.262 Sum_probs=54.3
Q ss_pred HHHHccCcceeeeeeccCCCCc--CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCC-cE-EEeCCCcHHHHHHHHHH
Q 015327 89 KFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGRR 164 (409)
Q Consensus 89 ~~a~~GlR~l~~a~~~~~~~~~--~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi-~v-~mlTGD~~~ta~~ia~~ 164 (409)
-+...|++|+.+... ++.++. .-.+.+..++|+-...++.-+.+++.++.+++.+- ++ +++-|-........++.
T Consensus 22 ~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~ 100 (119)
T cd02067 22 ALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKE 100 (119)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHH
Confidence 456789999776632 333221 11345668899888878888999999999999986 44 56666654443457777
Q ss_pred hCCC
Q 015327 165 LGMG 168 (409)
Q Consensus 165 lgi~ 168 (409)
.|.+
T Consensus 101 ~G~D 104 (119)
T cd02067 101 IGVD 104 (119)
T ss_pred cCCe
Confidence 7764
No 216
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=39.45 E-value=2e+02 Score=27.41 Aligned_cols=46 Identities=11% Similarity=0.225 Sum_probs=26.9
Q ss_pred EEeccCCCCc-chHHHHHHHHhCCCcEEEeCCCcHHHHH---HHHHHhCC
Q 015327 122 LIPLFDPPIH-DSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRLGM 167 (409)
Q Consensus 122 ~i~l~d~lr~-~~~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~lgi 167 (409)
+++..+++-. +...-++.|.++|+.-+++-.=..+.+. ..+++.|+
T Consensus 96 lm~Y~N~i~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi 145 (263)
T CHL00200 96 IFTYYNPVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNI 145 (263)
T ss_pred EEecccHHHHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCC
Confidence 5555555444 7777777777777776666554444333 34455555
No 217
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=37.81 E-value=56 Score=31.81 Aligned_cols=48 Identities=25% Similarity=0.377 Sum_probs=40.3
Q ss_pred EEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHH---HhCCC
Q 015327 121 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 168 (409)
Q Consensus 121 G~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~---~lgi~ 168 (409)
|++-..+.+=|++.++++.|+.+|-++.++|...-.+-...++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7788889999999999999999999999999988777666655 45653
No 218
>PRK00208 thiG thiazole synthase; Reviewed
Probab=37.71 E-value=2.2e+02 Score=26.98 Aligned_cols=52 Identities=25% Similarity=0.263 Sum_probs=45.2
Q ss_pred CCCCceEEEEEeccCCCCcchHHHHHHHHhC---CCcEEEeCCCcHHHHHHHHHH
Q 015327 113 SGSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 113 ~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 164 (409)
.+.+|.=+=+++=.+-+.||..++++.++.. |..|+-++-|++..|+.++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4678888888888888999999999999999 999997777888888888764
No 219
>PLN02423 phosphomannomutase
Probab=37.43 E-value=47 Score=31.16 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=26.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcHHHHH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK 159 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~ 159 (409)
++.+.+.++|++|++. ++++++||+......
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~ 54 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKIS 54 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHHH
Confidence 5788999999999976 999999999766443
No 220
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=36.79 E-value=1.4e+02 Score=27.95 Aligned_cols=108 Identities=11% Similarity=0.008 Sum_probs=71.7
Q ss_pred EEEEEeccCCCCcch--HHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhh
Q 015327 119 FIGLIPLFDPPIHDS--AETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 196 (409)
Q Consensus 119 ~lG~i~l~d~lr~~~--~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 196 (409)
.-|-+++++ ++||- ++.+-.|+..+ .|+.|.-...-|..+-+.+||.+.......+.-... .
T Consensus 90 V~~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np-------------~ 153 (244)
T KOG3109|consen 90 VHGRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP-------------I 153 (244)
T ss_pred hhccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC-------------C
Confidence 347788888 88875 45555555444 899999999999999999999543211111110000 0
Q ss_pred hccceeecCHhhHHHHHHHHHhC-CCEEEEEcCCcCCHHHHhhCCee
Q 015327 197 KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 242 (409)
Q Consensus 197 ~~~v~ar~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG 242 (409)
+..++|.-+|+-=-...+...-. .+.|.++-|+.+.+..-+.-+..
T Consensus 154 ~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~ 200 (244)
T KOG3109|consen 154 EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLK 200 (244)
T ss_pred CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccce
Confidence 12467777776555555555544 67899999999999888877754
No 221
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=35.01 E-value=1.6e+02 Score=25.90 Aligned_cols=67 Identities=22% Similarity=0.179 Sum_probs=41.7
Q ss_pred eeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhHHHHHHHHHHHHH
Q 015327 201 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQ 280 (409)
Q Consensus 201 ~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~~~ 280 (409)
+.--++++=...++.++..| .-+.+|++.- +..-+. .--..++..++..+|..++.+++.+++
T Consensus 106 ~~~~~~~e~~~~i~~~~~~G-~~viVGg~~~-~~~A~~---------------~gl~~v~i~sg~esi~~Al~eA~~i~~ 168 (176)
T PF06506_consen 106 YPYDSEEEIEAAIKQAKAEG-VDVIVGGGVV-CRLARK---------------LGLPGVLIESGEESIRRALEEALRIAR 168 (176)
T ss_dssp EEESSHHHHHHHHHHHHHTT---EEEESHHH-HHHHHH---------------TTSEEEESS--HHHHHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcC-CcEEECCHHH-HHHHHH---------------cCCcEEEEEecHHHHHHHHHHHHHHHH
Confidence 44456677777788887777 5556676631 222222 223466777889999999999999887
Q ss_pred HHHH
Q 015327 281 RMRN 284 (409)
Q Consensus 281 ~i~~ 284 (409)
..++
T Consensus 169 ~~~~ 172 (176)
T PF06506_consen 169 ARRR 172 (176)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 222
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=34.36 E-value=94 Score=23.47 Aligned_cols=46 Identities=15% Similarity=0.313 Sum_probs=36.3
Q ss_pred EEeccCCCCcchHHHHHHHHhCCCcEEE-eCCCcHHHHHHHHHHhCC
Q 015327 122 LIPLFDPPIHDSAETIRRALSLGLGVKM-ITGDQLAIAKETGRRLGM 167 (409)
Q Consensus 122 ~i~l~d~lr~~~~~~I~~l~~aGi~v~m-lTGD~~~ta~~ia~~lgi 167 (409)
++++.+...+.+.+..+.|++.|+.+.+ ..+.+...-..-|.+.|+
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 4555667778888889999999999988 566667777778888886
No 223
>COG4996 Predicted phosphatase [General function prediction only]
Probab=34.33 E-value=79 Score=27.07 Aligned_cols=57 Identities=19% Similarity=0.135 Sum_probs=48.7
Q ss_pred CCCCCceEEEEEeccCC------CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCC
Q 015327 112 SSGSPWQFIGLIPLFDP------PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 168 (409)
Q Consensus 112 ~~e~~l~~lG~i~l~d~------lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~ 168 (409)
+.+.+++.+--..++|. ++++++++++.+++.|.-+-.+|=.....|...-+.+++.
T Consensus 19 sl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 19 SLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred hcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 45556666666667765 8999999999999999999999999999999999999884
No 224
>PLN02591 tryptophan synthase
Probab=33.95 E-value=2e+02 Score=27.25 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=25.9
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCcC---CHHHHhhC-CeeEEecc
Q 015327 206 PEHKYEIVKHLQARNHICGMIGNGVN---DAPALKKA-DIGIAVAD 247 (409)
Q Consensus 206 P~~K~~iV~~lq~~g~~v~~iGDG~N---D~~aLk~A-dvGIa~~~ 247 (409)
|.+-.+.++.+++....-+++|=|++ |+..+... -=|+-+|+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGS 219 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGS 219 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECH
Confidence 45556778888876666677899988 44444332 22455543
No 225
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=33.89 E-value=1.2e+02 Score=28.78 Aligned_cols=51 Identities=25% Similarity=0.292 Sum_probs=44.8
Q ss_pred CCCceEEEEEeccCCCCcchHHHHHHHHhC---CCcEEEeCCCcHHHHHHHHHH
Q 015327 114 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 114 e~~l~~lG~i~l~d~lr~~~~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 164 (409)
+.+|.=+=+++=.+-+.||..++|+.++.. |..|+-++-|++..|+.++.-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 567888888888888999999999999999 999997888888888888864
No 226
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=33.89 E-value=65 Score=26.32 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=27.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCC
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 167 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi 167 (409)
--+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 346788899999999999999998874 3334554443
No 227
>PRK13670 hypothetical protein; Provisional
Probab=33.66 E-value=1.9e+02 Score=29.38 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=65.7
Q ss_pred ceEEEEEeccCCCCcchHHHHHHHHh---CCCcEEEeCCCc----------HHHHHHHHHHhCCCCCCCCCccccCcchh
Q 015327 117 WQFIGLIPLFDPPIHDSAETIRRALS---LGLGVKMITGDQ----------LAIAKETGRRLGMGTNMYPSSALSGQDRD 183 (409)
Q Consensus 117 l~~lG~i~l~d~lr~~~~~~I~~l~~---aGi~v~mlTGD~----------~~ta~~ia~~lgi~~~~~~~~~l~g~~~~ 183 (409)
|..+|+|+=.||+-.|=...|+++++ .|..+++++|+- ...=..++..+|++-
T Consensus 1 Mk~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~-------------- 66 (388)
T PRK13670 1 MKVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDL-------------- 66 (388)
T ss_pred CceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCE--------------
Confidence 45789999999999999999988875 477777777762 223334455555431
Q ss_pred hhhhcCChhHHhhhccceeecCHhhHHH-HHHHHHhCCCEEEEEcCCcCCHHHHhh
Q 015327 184 ESIVALPVDELIEKADGFAGVFPEHKYE-IVKHLQARNHICGMIGNGVNDAPALKK 238 (409)
Q Consensus 184 ~~~~~~~~~~~~~~~~v~ar~~P~~K~~-iV~~lq~~g~~v~~iGDG~ND~~aLk~ 238 (409)
+++---.|+..+|+.=.+ .|+.|...|-..+++|....|...|+.
T Consensus 67 ----------vielpf~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 67 ----------VVELPFLYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred ----------EEEeCCchHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 111001277778876654 466775567778889998888876655
No 228
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=33.64 E-value=49 Score=27.39 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=54.1
Q ss_pred HHHHccCcceeeeeeccCCCCc--CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCC-cE-EEeCCCcHHHHHHHHHH
Q 015327 89 KFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGRR 164 (409)
Q Consensus 89 ~~a~~GlR~l~~a~~~~~~~~~--~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi-~v-~mlTGD~~~ta~~ia~~ 164 (409)
-+...|++|+...-. +|.++. .-.+.+-.++++-.......+.+++.++.|++.|. ++ +++-|.....-.+-.++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 467789999888754 222221 11244557888888888899999999999999977 44 55555555444566668
Q ss_pred hCCC
Q 015327 165 LGMG 168 (409)
Q Consensus 165 lgi~ 168 (409)
.|++
T Consensus 101 ~G~d 104 (122)
T cd02071 101 MGVA 104 (122)
T ss_pred CCCC
Confidence 8874
No 229
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=33.00 E-value=1.2e+02 Score=28.69 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=43.9
Q ss_pred chHHHHHHHHhCCCcEEEeCCCcHHHH----------HHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccce
Q 015327 132 DSAETIRRALSLGLGVKMITGDQLAIA----------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 201 (409)
Q Consensus 132 ~~~~~I~~l~~aGi~v~mlTGD~~~ta----------~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 201 (409)
-+++-|+.++++||.| .||+..... ...|+++|++. ++-.+.+
T Consensus 42 ~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~-------------------------IEiS~G~ 94 (237)
T TIGR03849 42 IVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEA-------------------------VEISDGS 94 (237)
T ss_pred HHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCE-------------------------EEEcCCc
Confidence 4788999999999766 588743221 12455556531 1111345
Q ss_pred eecCHhhHHHHHHHHHhCCCEEEE
Q 015327 202 AGVFPEHKYEIVKHLQARNHICGM 225 (409)
Q Consensus 202 ar~~P~~K~~iV~~lq~~g~~v~~ 225 (409)
-.+++++|.++|+..++.|-.|..
T Consensus 95 ~~i~~~~~~rlI~~~~~~g~~v~~ 118 (237)
T TIGR03849 95 MEISLEERCNLIERAKDNGFMVLS 118 (237)
T ss_pred cCCCHHHHHHHHHHHHhCCCeEec
Confidence 677889999999999988766553
No 230
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=31.67 E-value=1.1e+02 Score=29.76 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=26.5
Q ss_pred cchHHHHHHHHhCCCcEEEeCCCcHHHHH-HHHHHhCC
Q 015327 131 HDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGM 167 (409)
Q Consensus 131 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~-~ia~~lgi 167 (409)
+++...=+.|+..|.+++++|......+. ...+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 45556667788999999999988765544 45555555
No 231
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=31.04 E-value=1.3e+02 Score=25.74 Aligned_cols=80 Identities=14% Similarity=0.161 Sum_probs=52.4
Q ss_pred HHHHccCcceeeeeeccCCCC-cCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCC--cEEEeCCCc------HHHHH
Q 015327 89 KFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQ------LAIAK 159 (409)
Q Consensus 89 ~~a~~GlR~l~~a~~~~~~~~-~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi--~v~mlTGD~------~~ta~ 159 (409)
-+...|++|+-+....-+++- ..-.+.+-.++|+-++--.--+..+++++.|+++|+ .++++-|-. .....
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 456789999988865422211 011244667888888887777789999999999987 456666632 11123
Q ss_pred HHHHHhCCC
Q 015327 160 ETGRRLGMG 168 (409)
Q Consensus 160 ~ia~~lgi~ 168 (409)
.-.+++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456778863
No 232
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=30.89 E-value=37 Score=29.73 Aligned_cols=24 Identities=17% Similarity=0.201 Sum_probs=20.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCC
Q 015327 129 PIHDSAETIRRALSLGLGVKMITG 152 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTG 152 (409)
+-++++++|++|.+.|+.++|+|-
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC
Confidence 345799999999999999999984
No 233
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=30.68 E-value=58 Score=25.04 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=27.6
Q ss_pred EEEeccCCC-CcchHHHHHHHHhCCCcEEEeCCCcH
Q 015327 121 GLIPLFDPP-IHDSAETIRRALSLGLGVKMITGDQL 155 (409)
Q Consensus 121 G~i~l~d~l-r~~~~~~I~~l~~aGi~v~mlTGD~~ 155 (409)
-.+.++-+= +....+.++.|+++|+++..+|.+..
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~~ 77 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDEL 77 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCHH
Confidence 445566665 78899999999999999998776643
No 234
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.59 E-value=2.4e+02 Score=27.29 Aligned_cols=64 Identities=22% Similarity=0.332 Sum_probs=40.1
Q ss_pred cceeecCHhhHHHHHHHHHh--CCCEEEEEcCC-cCCHH---HHhhCC--eeEEeccch--HHHhhccCEEecC
Q 015327 199 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VNDAP---ALKKAD--IGIAVADAT--DAARSAADIVLTE 262 (409)
Q Consensus 199 ~v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG-~ND~~---aLk~Ad--vGIa~~~~~--~~a~~aaDivl~~ 262 (409)
..|.-|||.-=.++++.+.- .|..|..+|-+ .-=-| +|...+ |-++..... ...-..||+++.-
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 34667788776677766653 38999999998 44445 665554 444444322 2234678998764
No 235
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=29.99 E-value=95 Score=26.68 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=32.6
Q ss_pred ceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCC
Q 015327 117 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 152 (409)
Q Consensus 117 l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTG 152 (409)
..-+.++|+.+.|...+-.+-+.|+++|++|+-+--
T Consensus 16 ~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 16 AKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 456899999999999999999999999999998854
No 236
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=29.62 E-value=49 Score=27.12 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=23.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHH
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLA 156 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ 156 (409)
--+++.++++.+++.|++|+.+|+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3457889999999999999999997653
No 237
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=28.55 E-value=42 Score=30.03 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=22.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEeCCCcH
Q 015327 128 PPIHDSAETIRRALSLGLGVKMITGDQL 155 (409)
Q Consensus 128 ~lr~~~~~~I~~l~~aGi~v~mlTGD~~ 155 (409)
+|-||+.+++++|.+.|..++++|+...
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 4678999999999999998888888764
No 238
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=28.45 E-value=1e+02 Score=23.71 Aligned_cols=48 Identities=19% Similarity=0.282 Sum_probs=37.1
Q ss_pred EEEEeccC---CCCcchHHHHHHHHhCCCcEEEe-CCCcHHHHHHHHHHhCC
Q 015327 120 IGLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGM 167 (409)
Q Consensus 120 lG~i~l~d---~lr~~~~~~I~~l~~aGi~v~ml-TGD~~~ta~~ia~~lgi 167 (409)
+.++++.+ ...+-+.+..+.|+++|+.+.+- ++++......-|...|+
T Consensus 2 v~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~ 53 (94)
T PF03129_consen 2 VVIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGI 53 (94)
T ss_dssp EEEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTE
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCC
Confidence 35667777 66777888899999999998888 55556667777888887
No 239
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=27.49 E-value=5e+02 Score=25.97 Aligned_cols=63 Identities=19% Similarity=0.199 Sum_probs=38.6
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcC----CHHHHhhCCeeEEe--ccc--hHHHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN----DAPALKKADIGIAV--ADA--TDAARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~N----D~~aLk~AdvGIa~--~~~--~~~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++..+- .|+.++.+|-+.. =+.+|...+.-+.+ ... -...-..||+++.-
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsA 264 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAA 264 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEc
Confidence 4666777766666666543 3899999999754 23466555544444 322 22334678998764
No 240
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=26.76 E-value=1.6e+02 Score=29.10 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=46.4
Q ss_pred CCCCceEEEEEeccCCCCcchHHHHHHHHhC---CCcEEEeCCCcHHHHHHHHHH
Q 015327 113 SGSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 113 ~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 164 (409)
.+.+|.=+=+++=..-+-||..++++.++.. |..|..++-|++..|+.++.-
T Consensus 163 ~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 163 GGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred cCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 4678888888888888999999999999999 999989999999999988864
No 241
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=26.50 E-value=1.5e+02 Score=27.80 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=14.6
Q ss_pred HHHHHHHHhCCCEEEEEcCCcCCH
Q 015327 210 YEIVKHLQARNHICGMIGNGVNDA 233 (409)
Q Consensus 210 ~~iV~~lq~~g~~v~~iGDG~ND~ 233 (409)
.+.++.+++....-.++|=|+|+.
T Consensus 176 ~~~i~~lr~~~~~pI~vggGI~~~ 199 (242)
T cd04724 176 KELIKRIRKYTDLPIAVGFGISTP 199 (242)
T ss_pred HHHHHHHHhcCCCcEEEEccCCCH
Confidence 455666665545556677777743
No 242
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=25.86 E-value=2.4e+02 Score=27.99 Aligned_cols=144 Identities=18% Similarity=0.132 Sum_probs=83.4
Q ss_pred HHHHHHHHHHccCcceeeeeeccCCCC----c----CCCCCCceEEEEEeccCCCCcchH--HHHHHHHhCCCc--E-EE
Q 015327 83 VNAVINKFAERGLRSLAVAYQEVPEGS----K----ESSGSPWQFIGLIPLFDPPIHDSA--ETIRRALSLGLG--V-KM 149 (409)
Q Consensus 83 ~~~~i~~~a~~GlR~l~~a~~~~~~~~----~----~~~e~~l~~lG~i~l~d~lr~~~~--~~I~~l~~aGi~--v-~m 149 (409)
..+.++-+.+.|+.=+.++.|.-+-.. + +..+.+| =+|++---....--++ -.|..|...||- + +=
T Consensus 153 Al~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIGDTIRVS 231 (346)
T TIGR00612 153 ALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIGDTIRVS 231 (346)
T ss_pred HHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCCCeEEEE
Confidence 345566678889999988887522110 0 1111121 2444433333333333 347888899982 2 44
Q ss_pred eCCCcHH---HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCH---hhHHHHHHHHHhC--CC
Q 015327 150 ITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP---EHKYEIVKHLQAR--NH 221 (409)
Q Consensus 150 lTGD~~~---ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P---~~K~~iV~~lq~~--g~ 221 (409)
+|+|..+ .+..|-+.+|+-....... .|.-|.|+.- ..-.++-+.++.. .-
T Consensus 232 LT~dP~~EV~va~~IL~slglr~~g~~ii---------------------SCPtCGR~~~dl~~~~~~ve~~l~~~~~~l 290 (346)
T TIGR00612 232 LTDDPTHEVPVAFEILQSLGLRARGVEIV---------------------ACPSCGRTGFDVEKVVRRVQEALFHLKTPL 290 (346)
T ss_pred CCCCcHHHHHHHHHHHHHcCCCcCCCeEE---------------------ECCCCCCcCCCHHHHHHHHHHHHhcCCCCC
Confidence 7899864 6778888898843221100 0122444431 1112233334432 45
Q ss_pred EEEEEcCCcCCHHHHhhCCeeEEec-cc
Q 015327 222 ICGMIGNGVNDAPALKKADIGIAVA-DA 248 (409)
Q Consensus 222 ~v~~iGDG~ND~~aLk~AdvGIa~~-~~ 248 (409)
.|+..|==+|-..--+.||+||+-+ .+
T Consensus 291 ~VAVMGCvVNGPGEak~ADiGIaggg~g 318 (346)
T TIGR00612 291 KVAVMGCVVNGPGEAKHADIGISGGGTG 318 (346)
T ss_pred EEEEECceecCCchhhccCeeeecCCCC
Confidence 7999999999999999999999987 44
No 243
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=25.81 E-value=1.4e+02 Score=22.15 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=34.2
Q ss_pred EEeccCCCCcchHHHHHHHHhCCCcEEEeC-CCcHHHHHHHHHHhCC
Q 015327 122 LIPLFDPPIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGM 167 (409)
Q Consensus 122 ~i~l~d~lr~~~~~~I~~l~~aGi~v~mlT-GD~~~ta~~ia~~lgi 167 (409)
++++.+..++.+.+....|++.|+.|.+.. +.+.......|...|+
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 455666677778888899999999998744 4466667777777776
No 244
>PRK09529 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Reviewed
Probab=25.16 E-value=2.3e+02 Score=30.81 Aligned_cols=140 Identities=22% Similarity=0.303 Sum_probs=84.3
Q ss_pred cchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHH
Q 015327 131 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 210 (409)
Q Consensus 131 ~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 210 (409)
+++.+.++.+++.|+-|.+. |+-.+....-..+.|++.... -.|.+...... ...-.++-+-+|+..+|-+..
T Consensus 149 e~a~~Ia~Elq~r~~lvfl~-G~l~EQl~e~gvk~G~~~~lv----p~G~~~ts~vH--a~g~AiRaAliFGgv~pGd~~ 221 (711)
T PRK09529 149 EKAKKIIKELQKKNLLTFLC-GEVIEQLIEAGVKLGLDYRLV----PLGDDITSAIH--AANFAIRAALIFGGVEPGDYE 221 (711)
T ss_pred HHHHHHHHHHHHCCcEEEEc-CcHHHHhhhcccccccceeEE----ecCCchhhHHH--HHHHHHHHHHHhcCCCCcCHH
Confidence 77788899999999988776 655554444455555533221 12211111000 012223445589999999999
Q ss_pred HHHHHHHhC-CCEEEEEcCCcCCHHHHhhCC---eeEEec--cchHHHhhccCEEecCCChhhHHHHHHHHHHH
Q 015327 211 EIVKHLQAR-NHICGMIGNGVNDAPALKKAD---IGIAVA--DATDAARSAADIVLTEPGLNVIITAVLISRAI 278 (409)
Q Consensus 211 ~iV~~lq~~-g~~v~~iGDG~ND~~aLk~Ad---vGIa~~--~~~~~a~~aaDivl~~~~l~~i~~~i~~gR~~ 278 (409)
++..+..++ +..|.+.| ..+|..+-..|+ .||-+- +.-......-+.++.+++.+.++.-=.+.|.+
T Consensus 222 ei~dY~~nRV~AfViA~G-~~s~~~~A~aaGai~~GfPVItd~~~pe~~~~~~~~~~~~~~d~iv~~~le~rgi 294 (711)
T PRK09529 222 ELLDYTKERVPAFVNALG-ELDDEWVAAAAGAINLGFPVITDQDVPEGICVPEWVLSEPDYDKIVQKALEVRGI 294 (711)
T ss_pred HHHHHHHhhccEEEEeec-ccCHHHHHHHhhHHhcCCcEeeCCCCccccccccccccCCCHHHHHHHHHHhcCc
Confidence 999999987 88899999 445544333332 454442 22222223567788888888877665565554
No 245
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=25.07 E-value=1.6e+02 Score=27.93 Aligned_cols=110 Identities=22% Similarity=0.185 Sum_probs=57.5
Q ss_pred CcchHHHHHHHHhCCCcEEEeCCCcHH----------HHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhcc
Q 015327 130 IHDSAETIRRALSLGLGVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 199 (409)
Q Consensus 130 r~~~~~~I~~l~~aGi~v~mlTGD~~~----------ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 199 (409)
++-+++-|+.++++||.|. +|.... .-...++++|++. ++-.+
T Consensus 53 ~~~l~eki~l~~~~gV~v~--~GGtl~E~a~~q~~~~~yl~~~k~lGf~~-------------------------IEiSd 105 (244)
T PF02679_consen 53 EEILKEKIDLAHSHGVYVY--PGGTLFEVAYQQGKFDEYLEECKELGFDA-------------------------IEISD 105 (244)
T ss_dssp CHHHHHHHHHHHCTT-EEE--E-HHHHHHHHHTT-HHHHHHHHHHCT-SE-------------------------EEE--
T ss_pred HHHHHHHHHHHHHcCCeEe--CCcHHHHHHHhcChHHHHHHHHHHcCCCE-------------------------EEecC
Confidence 3448899999999997764 676542 2233445555521 11112
Q ss_pred ceeecCHhhHHHHHHHHHhCCCEEEE-EcCCcCCHHHHhhCCeeEEeccchHHHhhccCEEecCCChhhH
Q 015327 200 GFAGVFPEHKYEIVKHLQARNHICGM-IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 268 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~~g~~v~~-iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i 268 (409)
.+-.+++++|.++|+..++.|-.|.. +| .-|...-..-++.--+.........-||.|+.+...++-
T Consensus 106 Gti~l~~~~r~~~I~~~~~~Gf~v~~EvG--~K~~~~~~~~~~~~~i~~~~~dLeAGA~~ViiEarEsG~ 173 (244)
T PF02679_consen 106 GTIDLPEEERLRLIRKAKEEGFKVLSEVG--KKDPESDFSLDPEELIEQAKRDLEAGADKVIIEARESGK 173 (244)
T ss_dssp SSS---HHHHHHHHHHHCCTTSEEEEEES---SSHHHHTT--CCHHHHHHHHHHHHTECEEEE--TTT--
T ss_pred CceeCCHHHHHHHHHHHHHCCCEEeeccc--CCCchhcccCCHHHHHHHHHHHHHCCCCEEEEeeeccCC
Confidence 35577899999999999999877665 77 334443333222222223333344558888877664443
No 246
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=24.89 E-value=1.9e+02 Score=26.28 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=56.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeec
Q 015327 125 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 204 (409)
Q Consensus 125 l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~ 204 (409)
+.-++-||+.+.|++-+..|++|.+-|.-+.. |+++=+.... -.++....+.+...
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~-----AQkL~Fghs~-------------------agdL~~lfsGyfDt 155 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-----AQKLFFGHSD-------------------AGDLNSLFSGYFDT 155 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCch-----hHHHhhcccc-------------------cccHHhhhcceeec
Confidence 45689999999999999999999999876543 2222221100 00111111122222
Q ss_pred CHhhH------HHHHHHHHhCCCEEEEEcCCcCCHHHHhhCCe
Q 015327 205 FPEHK------YEIVKHLQARNHICGMIGNGVNDAPALKKADI 241 (409)
Q Consensus 205 ~P~~K------~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv 241 (409)
+-.-| ..|++.+.-..+-++++.|..+...|-+.+++
T Consensus 156 tiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 156 TIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred cccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 22222 34555555556779999999988887666554
No 247
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=24.31 E-value=61 Score=26.44 Aligned_cols=27 Identities=22% Similarity=0.113 Sum_probs=23.0
Q ss_pred CcchHHHHHHHHhCCCcEEEeCCCcHH
Q 015327 130 IHDSAETIRRALSLGLGVKMITGDQLA 156 (409)
Q Consensus 130 r~~~~~~I~~l~~aGi~v~mlTGD~~~ 156 (409)
-+++.++++.+++.|.+++.+|+....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 346899999999999999999997543
No 248
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.62 E-value=1.8e+02 Score=28.31 Aligned_cols=63 Identities=17% Similarity=0.172 Sum_probs=39.6
Q ss_pred ceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhh------CCeeEEeccch--HHHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK------ADIGIAVADAT--DAARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~------AdvGIa~~~~~--~~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.++- .|+.|+.+|-+..= +.||.. |-|-++-+... ...-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 135 RFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAA 211 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 4556788777777776653 48999999998542 335543 44555544322 2344678998863
No 249
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=23.59 E-value=2.3e+02 Score=27.46 Aligned_cols=164 Identities=15% Similarity=0.210 Sum_probs=84.3
Q ss_pred CCeEEEEE-cCCHHHHHHhhcc--------CchhHHHHHHHHHHHHHccCcceeeeeeccCCC-------C--c------
Q 015327 55 EGKMHRVT-KGSPEQILNLLHN--------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-------S--K------ 110 (409)
Q Consensus 55 ~g~~~~~~-KGa~e~il~~c~~--------~~~~~~~~~~~i~~~a~~GlR~l~~a~~~~~~~-------~--~------ 110 (409)
+|...++. =|.|..+.+.... +--+-.++++.+.+++++|+.++.++.+.-++- + .
T Consensus 63 ~g~~ViirAHGv~~~~~~~l~~~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~ 142 (281)
T PF02401_consen 63 EGDTVIIRAHGVPPEVYEELKERGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVES 142 (281)
T ss_dssp TTEEEEE-TT---HHHHHHHHHTTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESS
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCC
Confidence 45544443 5888877776642 112446788999999999999999997654321 0 0
Q ss_pred -CC----CCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEe--------CCCcHHHHHHHHHHhCCCCCCCCCccc
Q 015327 111 -ES----SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMI--------TGDQLAIAKETGRRLGMGTNMYPSSAL 177 (409)
Q Consensus 111 -~~----~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~ml--------TGD~~~ta~~ia~~lgi~~~~~~~~~l 177 (409)
++ ...+..-++++.=.--...+..+.++.|++..-.+... |-+.+..+..+|+++.+
T Consensus 143 ~~~~~~l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~---------- 212 (281)
T PF02401_consen 143 PEDVEKLPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDA---------- 212 (281)
T ss_dssp HHHHHHGGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSE----------
T ss_pred hhhhcccCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCE----------
Confidence 00 01122345555555556666666666666665555422 22223333344433221
Q ss_pred cCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCH--HHHhhC-CeeEEeccch
Q 015327 178 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDA--PALKKA-DIGIAVADAT 249 (409)
Q Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~--~aLk~A-dvGIa~~~~~ 249 (409)
.-+...-...+-..+.+..++.+..+..|.+- .|. .+|+.+ .|||.-|.++
T Consensus 213 --------------------miVIGg~~SsNT~kL~eia~~~~~~t~~Ie~~-~el~~~~l~~~~~VGItaGAST 266 (281)
T PF02401_consen 213 --------------------MIVIGGKNSSNTRKLAEIAKEHGKPTYHIETA-DELDPEWLKGVKKVGITAGAST 266 (281)
T ss_dssp --------------------EEEES-TT-HHHHHHHHHHHHCTTCEEEESSG-GG--HHHHTT-SEEEEEE-TTS
T ss_pred --------------------EEEecCCCCccHHHHHHHHHHhCCCEEEeCCc-cccCHhHhCCCCEEEEEccCCC
Confidence 01233344455566777777777778888763 344 567777 5777776443
No 250
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=23.57 E-value=5.9e+02 Score=25.63 Aligned_cols=64 Identities=19% Similarity=0.300 Sum_probs=37.7
Q ss_pred cceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcC----CHHHHhhCC--eeEEeccch--HHHhhccCEEecC
Q 015327 199 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVN----DAPALKKAD--IGIAVADAT--DAARSAADIVLTE 262 (409)
Q Consensus 199 ~v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~N----D~~aLk~Ad--vGIa~~~~~--~~a~~aaDivl~~ 262 (409)
..|.-|||.-=.++++.+.. .|+.|..+|-+.. =+.||...+ |-++-.... ...-..||+++.-
T Consensus 208 ~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsA 281 (364)
T PLN02616 208 PLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISA 281 (364)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 34667788775566655543 3889999998744 133554444 444444222 2233678888754
No 251
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=23.28 E-value=1.1e+02 Score=28.75 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=38.2
Q ss_pred EEeccCCCCcc-hHHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCCCC
Q 015327 122 LIPLFDPPIHD-SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 169 (409)
Q Consensus 122 ~i~l~d~lr~~-~~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi~~ 169 (409)
.+.|.-....+ ..+.|..|++.|+.|+=++-|...+-..+-+++|+..
T Consensus 186 ~~~f~t~m~~~~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 186 YFDFDTSMDADILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred EEEecCcCCHHHHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 44444443443 3678999999999999999999999999999999853
No 252
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=23.10 E-value=2.1e+02 Score=23.61 Aligned_cols=71 Identities=14% Similarity=0.202 Sum_probs=47.6
Q ss_pred hhHHHHHhhccCchhhhcCceEEEEecCCCCCceEEEEEEeCCCeEEEEEcCCHHHHHHhhccCchhHHHHHHHHHHHHH
Q 015327 13 VIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAE 92 (409)
Q Consensus 13 ~~d~ai~~~~~~~~~~r~~~~~l~~~pF~s~~kr~sv~v~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~i~~~a~ 92 (409)
.||..++...+ -..++.++...-++..+..+-++..+.|+-.+..-||.- .+.+
T Consensus 26 tID~~Ll~aag-----i~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~lNGAAA---------------------r~~~ 79 (111)
T cd06919 26 TIDEDLLEAAG-----ILPYEKVLVVNVNNGARFETYVIPGERGSGVICLNGAAA---------------------RLGQ 79 (111)
T ss_pred EECHHHHHhcC-----CCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCCHHH---------------------hcCC
Confidence 35666665544 346777777777777766665555566666677777654 2334
Q ss_pred ccCcceeeeeeccCCCC
Q 015327 93 RGLRSLAVAYQEVPEGS 109 (409)
Q Consensus 93 ~GlR~l~~a~~~~~~~~ 109 (409)
.|-+++.++|..+++++
T Consensus 80 ~GD~vII~sy~~~~~~e 96 (111)
T cd06919 80 PGDRVIIMAYALMDEEE 96 (111)
T ss_pred CCCEEEEEECccCCHHH
Confidence 68899999998876654
No 253
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=22.98 E-value=90 Score=30.04 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=32.6
Q ss_pred CCceEEEEEeccCCCCcchHHHHHHHHhCCC-cEEEeCCCcHH
Q 015327 115 SPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLA 156 (409)
Q Consensus 115 ~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi-~v~mlTGD~~~ 156 (409)
.++..+--+...|.-|.+....+..+..+|| +|.++|||.+.
T Consensus 69 ~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 69 TGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp TT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred hCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 4567888888889888889999999999999 59999999763
No 254
>PRK10444 UMP phosphatase; Provisional
Probab=22.95 E-value=85 Score=29.57 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=28.7
Q ss_pred ecCHhhHHHHHHHHHhCCCEEEEEcCCc-CCHHHHhhCCee
Q 015327 203 GVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 242 (409)
Q Consensus 203 r~~P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG 242 (409)
.-+|+-=..+.+.++.....++||||.. +|..+-+.+++-
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~ 214 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLE 214 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCC
Confidence 3344433445555554567899999997 899999999976
No 255
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.93 E-value=2.4e+02 Score=27.01 Aligned_cols=53 Identities=11% Similarity=-0.028 Sum_probs=40.4
Q ss_pred CCceEEEEEeccCCCCc---chHHHHHHHHhCCCcEEEe-CCCcHHHHHHHHHHhCC
Q 015327 115 SPWQFIGLIPLFDPPIH---DSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGM 167 (409)
Q Consensus 115 ~~l~~lG~i~l~d~lr~---~~~~~I~~l~~aGi~v~ml-TGD~~~ta~~ia~~lgi 167 (409)
-++..++++++...-.| +..+.++.+++.++++++. +.-+..++..++++.|+
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 45777887776544333 4457889999999998777 66677899999999986
No 256
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=22.66 E-value=5.2e+02 Score=24.40 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=14.0
Q ss_pred HHHHHHHHHhCCCEEEEEcCCcCC
Q 015327 209 KYEIVKHLQARNHICGMIGNGVND 232 (409)
Q Consensus 209 K~~iV~~lq~~g~~v~~iGDG~ND 232 (409)
-.+.++.+++....-+++|=|++.
T Consensus 186 ~~~~i~~lr~~~~~pi~vgfGI~~ 209 (256)
T TIGR00262 186 LNELVKRLKAYSAKPVLVGFGISK 209 (256)
T ss_pred HHHHHHHHHhhcCCCEEEeCCCCC
Confidence 345566666543334667888873
No 257
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=22.50 E-value=81 Score=22.59 Aligned_cols=24 Identities=29% Similarity=0.364 Sum_probs=17.7
Q ss_pred cchHHHHHHHHhCCCcEEEeCCCc
Q 015327 131 HDSAETIRRALSLGLGVKMITGDQ 154 (409)
Q Consensus 131 ~~~~~~I~~l~~aGi~v~mlTGD~ 154 (409)
|+-++.+..|.++|++|-|.|-+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 566889999999999999988654
No 258
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=22.36 E-value=1.7e+02 Score=23.74 Aligned_cols=26 Identities=23% Similarity=0.188 Sum_probs=22.8
Q ss_pred cchHHHHHHHHhCCCcEEEeCCCcHH
Q 015327 131 HDSAETIRRALSLGLGVKMITGDQLA 156 (409)
Q Consensus 131 ~~~~~~I~~l~~aGi~v~mlTGD~~~ 156 (409)
++..+.++.+++.|++++.+|++...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 56788999999999999999998653
No 259
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. This CD includes the C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. The Escherichia coli tdcB gene product, ThrD-II, anaerobically catalyzes the pyridoxal phosphate-dependent dehydration of L-threonine and L-serine to ammonia and to alpha-ketobutyrate and pyruvate, respectively. Tetrameric ThrD-II is subject to allosteric activation by AMP, inhibition by alpha-keto acids, and catabolite inactivation by several metabolites of glycolysis and the citric acid cycle. Also included in this CD are N-terminal ACT domains present in smaller (~170 a.a.) archaeal proteins of unknown function. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.65 E-value=2.8e+02 Score=19.28 Aligned_cols=62 Identities=15% Similarity=0.091 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEE
Q 015327 82 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 148 (409)
Q Consensus 82 ~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~ 148 (409)
.+.+..+.++..|..+..+.+..-.. ...+....-.+.++-+-.....+.++.|++.|++++
T Consensus 11 ~L~~i~~~i~~~~~nI~~i~~~~~~~-----~~~~~~~~~~i~v~~~~~~~l~~l~~~l~~~g~~~~ 72 (73)
T cd04886 11 QLAKLLAVIAEAGANIIEVSHDRAFK-----TLPLGEVEVELTLETRGAEHIEEIIAALREAGYDVR 72 (73)
T ss_pred hHHHHHHHHHHcCCCEEEEEEEeccC-----CCCCceEEEEEEEEeCCHHHHHHHHHHHHHcCCEEe
Confidence 45566677788898888776543110 001223444455555556677899999999999875
No 260
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.51 E-value=1.9e+02 Score=28.04 Aligned_cols=63 Identities=22% Similarity=0.264 Sum_probs=37.6
Q ss_pred ceeecCHhhHHHHHHHHH--hCCCEEEEEcCCcC----CHHHHhh--CCeeEEeccchH--HHhhccCEEecC
Q 015327 200 GFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGVN----DAPALKK--ADIGIAVADATD--AARSAADIVLTE 262 (409)
Q Consensus 200 v~ar~~P~~K~~iV~~lq--~~g~~v~~iGDG~N----D~~aLk~--AdvGIa~~~~~~--~a~~aaDivl~~ 262 (409)
.|.-|||.-=.++++.+. -.|+.|+.+|-|.. =+.+|.. |.|-+.-....+ ..-..||+|+.-
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSA 208 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEEC
Confidence 456677776666666664 24899999999862 1334444 344444443222 234678888764
No 261
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.44 E-value=2.1e+02 Score=27.69 Aligned_cols=64 Identities=16% Similarity=0.216 Sum_probs=39.1
Q ss_pred cceeecCHhhHHHHHHHHHh--CCCEEEEEcCCcCC----HHHHhhCC--eeEEeccch--HHHhhccCEEecC
Q 015327 199 DGFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKAD--IGIAVADAT--DAARSAADIVLTE 262 (409)
Q Consensus 199 ~v~ar~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~Ad--vGIa~~~~~--~~a~~aaDivl~~ 262 (409)
..|.-|||.-=.++++.++- .|+.|+.+|-+..= +.+|...+ |-++..... ...-..||+++.-
T Consensus 135 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 135 DTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 34667788777777777653 48899999987542 33554444 444433222 2344678888754
No 262
>PLN02389 biotin synthase
Probab=21.13 E-value=6.3e+02 Score=25.49 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHccCcceeeeeeccCCCCcCCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCCcEEEeCCCcHHHHH
Q 015327 80 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK 159 (409)
Q Consensus 80 ~~~~~~~i~~~a~~GlR~l~~a~~~~~~~~~~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi~v~mlTGD~~~ta~ 159 (409)
.+.+.+.+.+..+.|.+.+++.... -|. .=++...+.+.+.++.+++.|+.+..-.|--.....
T Consensus 118 ~EeIl~~a~~~~~~G~~~~~ivts~---------------rg~-~~e~~~~e~i~eiir~ik~~~l~i~~s~G~l~~E~l 181 (379)
T PLN02389 118 KDDVLEAAKRAKEAGSTRFCMGAAW---------------RDT-VGRKTNFNQILEYVKEIRGMGMEVCCTLGMLEKEQA 181 (379)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecc---------------cCC-CCChhHHHHHHHHHHHHhcCCcEEEECCCCCCHHHH
Confidence 3455566666777788766653110 000 001123467788899998889988877887666666
Q ss_pred HHHHHhCCCCCCCCCccccCcchhhhhhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEE---EEEcCCcCC
Q 015327 160 ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHIC---GMIGNGVND 232 (409)
Q Consensus 160 ~ia~~lgi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v---~~iGDG~ND 232 (409)
..-++.|++.-. . .+... .+... .+++.-+++++.+.++..++.|-.| +++|=|..+
T Consensus 182 ~~LkeAGld~~~--~-~LeTs-----------~~~y~--~i~~~~s~e~rl~ti~~a~~~Gi~v~sg~IiGlgEt~ 241 (379)
T PLN02389 182 AQLKEAGLTAYN--H-NLDTS-----------REYYP--NVITTRSYDDRLETLEAVREAGISVCSGGIIGLGEAE 241 (379)
T ss_pred HHHHHcCCCEEE--e-eecCC-----------hHHhC--CcCCCCCHHHHHHHHHHHHHcCCeEeEEEEECCCCCH
Confidence 667777885311 1 01110 11111 1334558899999999999887543 346665544
No 263
>KOG1504 consensus Ornithine carbamoyltransferase OTC/ARG3 [Amino acid transport and metabolism]
Probab=21.06 E-value=1e+02 Score=29.47 Aligned_cols=38 Identities=24% Similarity=0.327 Sum_probs=28.4
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCcCCH--HHHhhCCeeEEec
Q 015327 209 KYEIVKHLQA--RNHICGMIGNGVNDA--PALKKADIGIAVA 246 (409)
Q Consensus 209 K~~iV~~lq~--~g~~v~~iGDG~ND~--~aLk~AdvGIa~~ 246 (409)
-+.|++.+.+ .|-.++.||||.|=. -|+..|-+||.+.
T Consensus 177 ~LTi~E~f~ks~~glkvawiGD~NNvlhs~mia~ak~gih~s 218 (346)
T KOG1504|consen 177 LLTIIEHFGKSVEGLKVAWIGDGNNVLHSWMIAAAKFGIHFS 218 (346)
T ss_pred HHHHHHHHhccccccEEEEEccccHHHHHHHHHhhhcceEEE
Confidence 3566777743 478899999998854 4778888888775
No 264
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.96 E-value=61 Score=29.43 Aligned_cols=78 Identities=19% Similarity=0.292 Sum_probs=52.6
Q ss_pred HHHHccCcceeeeeeccCCCCcC--CCCCCceEEEEEeccCCCCcchHHHHHHHHhCCC--cEEEeCCCcHHHHHHHHHH
Q 015327 89 KFAERGLRSLAVAYQEVPEGSKE--SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGRR 164 (409)
Q Consensus 89 ~~a~~GlR~l~~a~~~~~~~~~~--~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi--~v~mlTGD~~~ta~~ia~~ 164 (409)
-+...|++|+-+.. .+|.++.- -.+.+..++|+-.....--+..++.|+.+++.+. ++.++=|-...+ ...++.
T Consensus 105 ~l~~~G~~vi~lG~-~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~-~~~~~~ 182 (201)
T cd02070 105 MLEANGFEVIDLGR-DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN-QEFADE 182 (201)
T ss_pred HHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC-HHHHHH
Confidence 45678999987763 33332211 1245567899998888888999999999999987 664444444333 347777
Q ss_pred hCCC
Q 015327 165 LGMG 168 (409)
Q Consensus 165 lgi~ 168 (409)
+|-+
T Consensus 183 ~GaD 186 (201)
T cd02070 183 IGAD 186 (201)
T ss_pred cCCc
Confidence 7753
No 265
>PF12407 Abdominal-A: Homeobox protein ; InterPro: IPR022132 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00046 from PFAM. This family is a homeobox protein involved in differentiation of embryonic cells to form the abdominal region.
Probab=20.93 E-value=66 Score=18.51 Aligned_cols=14 Identities=36% Similarity=0.485 Sum_probs=9.9
Q ss_pred ccchhHHHHHhhhh
Q 015327 362 ELSWMAEEARRRAE 375 (409)
Q Consensus 362 ~~~~~~~~~~~r~~ 375 (409)
-+.+|.|||+|-.+
T Consensus 4 avkeineqar~e~~ 17 (24)
T PF12407_consen 4 AVKEINEQARRERE 17 (24)
T ss_pred HHHHHHHHHHHHHH
Confidence 45678899988444
No 266
>PRK13671 hypothetical protein; Provisional
Probab=20.75 E-value=5.5e+02 Score=25.05 Aligned_cols=97 Identities=20% Similarity=0.235 Sum_probs=60.8
Q ss_pred EEEEEeccCCCCcchHHHHHHHHhC-C--CcEEEeCCCcHH----------HHHHHHHHhCCCCCCCCCccccCcchhhh
Q 015327 119 FIGLIPLFDPPIHDSAETIRRALSL-G--LGVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDES 185 (409)
Q Consensus 119 ~lG~i~l~d~lr~~~~~~I~~l~~a-G--i~v~mlTGD~~~----------ta~~ia~~lgi~~~~~~~~~l~g~~~~~~ 185 (409)
.+|+|+=.||+-.|=...++.+++. + .-+++.+|+... .=.+++..+|.+- |+
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~qrg~pa~~~~~~R~~ma~~~G~DL------Vi-------- 67 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQRGEIAVASFEKRKKIALKYGVDK------VI-------- 67 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCCCCCCCCCCHHHHHHHHHHcCCCE------EE--------
Confidence 3799999999999999999988873 3 346667888742 2224555555531 11
Q ss_pred hhcCChhHHhhhccceeecCHhhHHHHHHHHHhCCCEEEEEcCCcCCHHHHhh
Q 015327 186 IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 238 (409)
Q Consensus 186 ~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~ 238 (409)
+++..--+..+..|| .--|+.|...|-..+++|.-.+|...|+.
T Consensus 68 --ELP~~~a~~sAe~FA-------~gaV~lL~~lgvd~l~FGsE~~d~~~l~~ 111 (298)
T PRK13671 68 --KLPFEYATQAAHIFA-------KGAIKKLNKEKIDKLIFGSESNDIELMYK 111 (298)
T ss_pred --eccHHHHhhchHHHH-------HHHHHHHHHcCCCEEEECCCCCCHHHHHH
Confidence 111111122222333 23577777777668899999999866644
No 267
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=20.74 E-value=2.6e+02 Score=27.64 Aligned_cols=58 Identities=31% Similarity=0.457 Sum_probs=38.0
Q ss_pred HHHHHHHHhCCCEEEEEcCCc--------------------CCHHHHhhC--CeeEEec----cchHHHhh--ccCEEec
Q 015327 210 YEIVKHLQARNHICGMIGNGV--------------------NDAPALKKA--DIGIAVA----DATDAARS--AADIVLT 261 (409)
Q Consensus 210 ~~iV~~lq~~g~~v~~iGDG~--------------------ND~~aLk~A--dvGIa~~----~~~~~a~~--aaDivl~ 261 (409)
..+++.++++|..++.+.=|. .|-|+|=+- ++.+.++ .+...+.+ .+|++++
T Consensus 69 ~~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 69 IALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 356678888888888874332 366655433 6777777 23334433 5899999
Q ss_pred CCChhh
Q 015327 262 EPGLNV 267 (409)
Q Consensus 262 ~~~l~~ 267 (409)
||+|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 998764
No 268
>TIGR00129 fdhD_narQ formate dehydrogenase family accessory protein FdhD. FdhD in E. coli and NarQ in B. subtilis are required for the activity of formate dehydrogenase. The gene name in B. subtilis reflects the requirement of the neighboring gene narA for nitrate assimilation, for which NarQ is not required. In some species, the gene is associated not with a known formate dehydrogenase but with a related putative molybdopterin-binding oxidoreductase. A reasonable hypothesis is that this protein helps prepare a required cofactor for assembly into the holoenzyme.
Probab=20.54 E-value=1.7e+02 Score=27.40 Aligned_cols=34 Identities=15% Similarity=0.231 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCC
Q 015327 134 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 167 (409)
Q Consensus 134 ~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi 167 (409)
.+.+.++-.+||.+++-.+-....|..+|+++||
T Consensus 182 ~emv~Ka~~aGIpvlvS~sapT~lavelA~~~gi 215 (237)
T TIGR00129 182 SEMVQKAARCGVPIIASKSAPTDLAIEVAEESNI 215 (237)
T ss_pred HHHHHHHHHcCCCEEEEcccchHHHHHHHHHhCC
Confidence 4556666666666666666666777777777776
No 269
>PF13541 ChlI: Subunit ChlI of Mg-chelatase
Probab=20.53 E-value=1.2e+02 Score=25.42 Aligned_cols=40 Identities=20% Similarity=0.096 Sum_probs=34.1
Q ss_pred CCCCceEEEEEeccCCCCc--chHHHHHHHHhCCCcEEEeCC
Q 015327 113 SGSPWQFIGLIPLFDPPIH--DSAETIRRALSLGLGVKMITG 152 (409)
Q Consensus 113 ~e~~l~~lG~i~l~d~lr~--~~~~~I~~l~~aGi~v~mlTG 152 (409)
...++.|+|=+++.-.+|+ ++...+..+++.|++-+++--
T Consensus 78 ~~~~~~~~GEl~L~G~ir~v~~~~~~~~~A~~~G~~~vivP~ 119 (121)
T PF13541_consen 78 IPEDTVFIGELGLDGEIRPVPGILPRIIEAKKLGFKRVIVPK 119 (121)
T ss_pred cCCCEEEEEEecCCccEEecCcHHHHHHHHHHCCCCEEEeCC
Confidence 3478999999999999997 678889999999998777643
No 270
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=20.38 E-value=1.5e+02 Score=25.16 Aligned_cols=78 Identities=12% Similarity=0.201 Sum_probs=53.5
Q ss_pred HHHHccCcceeeeeeccCCCCc--CCCCCCceEEEEEeccCCCCcchHHHHHHHHhCCC-cE-EEeCCCc------HHHH
Q 015327 89 KFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQ------LAIA 158 (409)
Q Consensus 89 ~~a~~GlR~l~~a~~~~~~~~~--~~~e~~l~~lG~i~l~d~lr~~~~~~I~~l~~aGi-~v-~mlTGD~------~~ta 158 (409)
-+...|++|+.++... |.++. .-.+.+-.++|+-.+...-.+..++.++.|++.|. .+ +++-|-- ....
T Consensus 26 ~lr~~G~eVi~LG~~v-p~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 26 ALTEAGFEVINLGVMT-SQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 4567899999988653 22211 11245667899988888999999999999999966 33 4555533 3444
Q ss_pred HHHHHHhCC
Q 015327 159 KETGRRLGM 167 (409)
Q Consensus 159 ~~ia~~lgi 167 (409)
...++++|+
T Consensus 105 ~~~l~~~G~ 113 (137)
T PRK02261 105 EKKFKEMGF 113 (137)
T ss_pred HHHHHHcCC
Confidence 567777776
No 271
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=20.19 E-value=1.8e+02 Score=27.77 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=21.6
Q ss_pred HHHHHHHHhCCCcEEEeCCCcHHHHHHHHHHhCC
Q 015327 134 AETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 167 (409)
Q Consensus 134 ~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~lgi 167 (409)
.+.+.++-.+||.+++--+-....|..+|++.||
T Consensus 211 ~emv~Ka~~aGipvivS~saPT~lAVelA~~~gi 244 (263)
T PRK00724 211 SEMVQKAAMAGIPILVAVSAPTSLAVELAEELGL 244 (263)
T ss_pred HHHHHHHHHcCCcEEEEcccchHHHHHHHHHhCC
Confidence 4556666666666666666666666666666666
No 272
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.18 E-value=76 Score=26.03 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=23.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEeCCCcHH
Q 015327 129 PIHDSAETIRRALSLGLGVKMITGDQLA 156 (409)
Q Consensus 129 lr~~~~~~I~~l~~aGi~v~mlTGD~~~ 156 (409)
--+++.++++.+++.|.+++.+|+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDS 86 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 3468899999999999999999997654
Done!