BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015329
(409 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359482337|ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/408 (70%), Positives = 336/408 (82%), Gaps = 5/408 (1%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLRP RRFCH AA A +A A S N DKPLE PALVKLKAERDP
Sbjct: 1 MLSLRPIRRFCHAAAITAIAPVAETVTSAKS-----NCIKKPDKPLEEPALVKLKAERDP 55
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
E+LFQLFKANAHNR+V+EN++AFEDTVSRLAGA RFDYIEHLLEHQK+LPQGRREGFI+R
Sbjct: 56 ERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREGFIVR 115
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGMIK A+DTFYDMHL+GC+RTVKS NAALKVLT+S DL+AI FL +VP KF
Sbjct: 116 IIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFKF 175
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ D+FS NIVIKA C+M IL+KAY+VM+EM+K GV PDV+TYTTLISAFYK NR E+G
Sbjct: 176 GIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVG 235
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNLATFNVRIQ+LVN+RR+WQAN LMG+M+ GI PDEVTYNLVIKG
Sbjct: 236 NGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKG 295
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC++G+L+MAKKVYSA+ G+ PN KIYQTMIHYLC+ G+F++AY MCKD M +NW +
Sbjct: 296 FCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMCKDCMNRNWSLN 355
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
VDTI LLEGLK N + KA I+ L ++RVP FS NQL F+S+LSK
Sbjct: 356 VDTIYKLLEGLKGNGEIDKAKVILRLARKRVPSFSKNQLGVFESVLSK 403
>gi|255553141|ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543245|gb|EEF44777.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 400
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/409 (71%), Positives = 343/409 (83%), Gaps = 9/409 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLRP RRFC++AAAA I+ + A N+ N+ KPLE PAL KLKAERDP
Sbjct: 1 MLSLRPIRRFCYSAAAA----ISSTDSPAAVSNRVLNQ-----KPLEEPALAKLKAERDP 51
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF LFKANA NR+VIEN++AFEDT+SRLAGARRFDYIEHLLEHQK+LPQGRREGFI+R
Sbjct: 52 EKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREGFIIR 111
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGM KHA+DTF DMH+YGCKRTVKS NAALKVLTE+ DL+AI+AFL EVPEKF
Sbjct: 112 IIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKF 171
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I DIFS NI+IKAFC+M ILDKAYLVM++M++LG++PDV+TYTTLISAFYK++R EI
Sbjct: 172 DIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEIS 231
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNL+TFNVRIQHLVN R+SWQAN++M LM+R GI PDEVTYNLVIKG
Sbjct: 232 NGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKG 291
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F ++G+L+MA++VYSA+ G+ PN KIYQTMIH LC+ G+F+LAY MCKD MKK+W +
Sbjct: 292 FGQAGYLEMARRVYSALHGKGYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSWFLN 351
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
VDTI LL+GLKKN Q KA I+ L QRR+P FSS QLS F S+LS+S
Sbjct: 352 VDTIHTLLDGLKKNGQLDKAKMIVTLAQRRMPPFSSKQLSIFDSLLSRS 400
>gi|449468996|ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/409 (68%), Positives = 327/409 (79%), Gaps = 10/409 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLRP RRFCH AA I + A LN N K LE PALVKLKAERDP
Sbjct: 1 MLSLRPIRRFCH-----AATVIPSTDTTAAVLNHVQN-----SKSLEEPALVKLKAERDP 50
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF LFKANAHNR+VIEN++AFEDTVSRLAGARRFDYIEHLLEHQK+LPQGRREGFI+R
Sbjct: 51 EKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIR 110
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKA MIKHA+DTFYDMHLYGC RTVKS NA LKVL +SRDL A++AFL E PEKF
Sbjct: 111 IIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKF 170
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ DI S NI++KAFC+ G L++AYL+M+EM+KLG+KPDV+TYTTLISA YKD + EI
Sbjct: 171 DIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEIS 230
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV +GC PNL TFNVRIQHL+ +RR+W ANKLM +M+ GI PDEVTYNLVIKG
Sbjct: 231 NGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKG 290
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC++G LDMAK+VYSA+ G PN KIYQTMIHYLC+ DFNLA+ +CKD+M KNW P+
Sbjct: 291 FCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPN 350
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
+DTI +LL+GL K + KA I+AL ++RVP FS NQL A + L+ S
Sbjct: 351 IDTIHSLLKGLNKMGEAGKAQLILALARKRVPPFSKNQLEALNTTLANS 399
>gi|224070831|ref|XP_002303255.1| predicted protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/409 (67%), Positives = 332/409 (81%), Gaps = 8/409 (1%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRFC+ AA+ +AL+ A N+ N+ KPLE PALVKLKAERDP
Sbjct: 1 MLSLRNTRRFCNFAAS-----VALSRSPAAVSNRIQNQN---QKPLEEPALVKLKAERDP 52
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF LFKANA NR+V+EN++AFEDTVSRLAGA RFDYIEHLLEHQK LPQGRREGF++R
Sbjct: 53 EKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPLPQGRREGFMVR 112
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGMIKHA+DTFY+MHL+GCKRTVKS+NAALKVLT +RDL AI+AF+ E P+KF
Sbjct: 113 IIMLYGKAGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNEAPKKF 172
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ DIFS NI++KA CE G LDKAYL+MVEM+K GV+PDVITYTTL+SAFYK+NR EIG
Sbjct: 173 DIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNRSEIG 232
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNLATFNVRIQ+LVN RR+W AN +M LM + GI PDEVTYNLVIKG
Sbjct: 233 NGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKG 292
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F ++G L+MAK VY ++ G+ N K+YQTM+HYLC+ G+F+LAY MC+D M+ NW +
Sbjct: 293 FFQTGKLEMAKMVYFSLRGKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRNNWFLN 352
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
VDTI LLEGLKKN Q KA I+ L Q+RVP F S+ L + +++LS+S
Sbjct: 353 VDTIHTLLEGLKKNGQLNKAKVIVTLAQKRVPPFPSSHLRSLQAVLSRS 401
>gi|317106734|dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/410 (69%), Positives = 330/410 (80%), Gaps = 12/410 (2%)
Query: 1 MLSLRPNRRFCHTAAA-AAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERD 59
MLSLR RRFCH+AAA A+ D+ A+ + SLN ++PLE PAL+KLKAERD
Sbjct: 1 MLSLRLTRRFCHSAAAIASTDSPAV--VSNYSLN---------NRPLEEPALIKLKAERD 49
Query: 60 PEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM 119
PEKLF LFKANA NR+VIEN++AFEDTVSRLAGARRF YIE+LLEHQK+LPQGRREGFI+
Sbjct: 50 PEKLFNLFKANAQNRLVIENRFAFEDTVSRLAGARRFHYIENLLEHQKTLPQGRREGFIV 109
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
RI+MLY KAGM+KHA++TFYDMHLYGCKRTVKS NAALKVLT +R++ AIQ FL E PEK
Sbjct: 110 RIIMLYAKAGMVKHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAIQDFLCEAPEK 169
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F I DIFS NI+IKA CEMG LDKAYLVMV+ QK G++ DVITYTTLISA Y++ I
Sbjct: 170 FDITMDIFSINIIIKALCEMGYLDKAYLVMVQFQKSGIEADVITYTTLISASYRNKLWMI 229
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
GNGLWNLMV KGC PNLATFNVRIQ+LVN R+SW+AN +M LMQR GI PD+VTYNLVIK
Sbjct: 230 GNGLWNLMVLKGCKPNLATFNVRIQYLVNSRQSWEANDVMRLMQRIGIAPDQVTYNLVIK 289
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC +G+L+MAK+VYSA+ G PN KIYQTMIHYLC+ G+F+LAY MCKD M K W
Sbjct: 290 GFCLAGYLEMAKRVYSALQGEVYKPNFKIYQTMIHYLCKGGEFDLAYTMCKDCMGKGWYL 349
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
VDTI ALL GL KN KA I+ L +R+VP FSS+QLS+F SILS S
Sbjct: 350 HVDTIHALLNGLMKNGHLGKAKLIVTLAKRKVPPFSSSQLSSFYSILSNS 399
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/409 (65%), Positives = 327/409 (79%), Gaps = 8/409 (1%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRF + AAA + L + A N N+ KPLE PAL+KLKAERDP
Sbjct: 1 MLSLRVTRRFRNFAAA-----VLLTHSPAAVSNLIQNQN---QKPLEEPALLKLKAERDP 52
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF LFKANA N++V+EN++AFEDTVSRLAGA RFDYIEHLLEHQK+LPQGRREG+++R
Sbjct: 53 EKLFNLFKANAENKLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKTLPQGRREGYMVR 112
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGMI+HA+DTF++MHL GCKRTVKS NAALKVLT +RDL I+ F+ E P+KF
Sbjct: 113 IIMLYGKAGMIEHAIDTFHNMHLRGCKRTVKSFNAALKVLTGTRDLATIETFVNEAPKKF 172
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+FDIFS NI++KA CE G+LDK+YL+MVEM+K GV PDVITYTTL SA+YK+N+ EIG
Sbjct: 173 DIEFDIFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLTSAYYKNNKAEIG 232
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNLATFNVRIQ+LVN RR+W AN +M LMQ+ GI PDEV+YNLV+KG
Sbjct: 233 NGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMQKIGIVPDEVSYNLVLKG 292
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + G+L+MAK VY ++ + N K+YQTM+HYLC+ G+F+LAY MC+D M+ NW +
Sbjct: 293 FFQVGNLEMAKLVYFSLRCKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRTNWFLN 352
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
VDTI LLEGLKKN Q KA I+ L QRRVP F S+ LS+ +++LS+S
Sbjct: 353 VDTIHTLLEGLKKNGQLNKAKVILTLAQRRVPPFPSSHLSSMQAVLSRS 401
>gi|297842851|ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335148|gb|EFH65566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/406 (62%), Positives = 310/406 (76%), Gaps = 9/406 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRFCH +++AA IA + + + KPLE PALVKLK+ERDP
Sbjct: 1 MLSLRLIRRFCHFSSSAAT-GIAYVSTDSNQIQGL--------KPLEEPALVKLKSERDP 51
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF+LF+ANA NR+VIEN++AFEDTVSRLAGA R D+IE LLEHQK+LPQGRREGFI+R
Sbjct: 52 EKLFKLFQANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVR 111
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGM K A+DTFY+M LYGCKR+VKS NAAL+VL+ DL I+ FL + P K+
Sbjct: 112 IIMLYGKAGMTKQALDTFYNMDLYGCKRSVKSFNAALQVLSFKPDLHTIREFLHDAPAKY 171
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D SFNI IK+FCE+GILD AY+ M EM+K G+KPDV+TYTTLISAFYK R IG
Sbjct: 172 RIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLKPDVVTYTTLISAFYKHERCVIG 231
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNL TFNVRIQ LVN+RR+W AN L+ LM + +EPD +TYN+VIKG
Sbjct: 232 NGLWNLMVLKGCRPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + MA++VY+AM G+ PN KIYQTMIHYLC+ G+F+LAY MCKD M+K W P+
Sbjct: 292 FFLARFPHMAERVYTAMHGKGYKPNVKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+DT+ LL+GL K +Q +A +IM LV +RVP F S QL + KSIL
Sbjct: 352 LDTVEMLLKGLVKKDQLDQAKSIMGLVHKRVPPFRSKQLLSLKSIL 397
>gi|15220068|ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/406 (62%), Positives = 306/406 (75%), Gaps = 9/406 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRFCH ++AA IA + + + KPLE PALVKLK+ERDP
Sbjct: 1 MLSLRHIRRFCHFPSSAAT-GIAYVSTESNQIQGL--------KPLEEPALVKLKSERDP 51
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKL+ LFKANA NR+VIEN++AFEDTVSRLAGA R D+IE LLEHQK+LPQGRREGFI+R
Sbjct: 52 EKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVR 111
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGM K A+DTF++M LYGCKR+VKS NAAL+VL+ + DL I FL + P K+
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D SFNI IK+FCE+GILD AY+ M EM+K G+ PDV+TYTTLISA YK R IG
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNL TFNVRIQ LVN+RR+W AN L+ LM + +EPD +TYN+VIKG
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + DMA++VY+AM G+ PN KIYQTMIHYLC+ G+F+LAY MCKD M+K W P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+DT+ LL+GL K Q +A +IM LV RRVP F S QL + KSIL
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
>gi|26453140|dbj|BAC43646.1| unknown protein [Arabidopsis thaliana]
gi|28950987|gb|AAO63417.1| At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/406 (62%), Positives = 306/406 (75%), Gaps = 9/406 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRFCH ++AA IA + + + KPLE PALVKLK+ERDP
Sbjct: 1 MLSLRHIRRFCHFPSSAAT-GIAYVSTESNQIQGL--------KPLEEPALVKLKSERDP 51
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKL+ LFKANA NR+VIEN++AFEDTVSRLAGA R D+IE LLEHQK+LPQGRREGF++R
Sbjct: 52 EKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFMVR 111
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGM K A+DTF++M LYGCKR+VKS NAAL+VL+ + DL I FL + P K+
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D SFNI IK+FCE+GILD AY+ M EM+K G+ PDV+TYTTLISA YK R IG
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNL+V KGC PNL TFNVRIQ LVN+RR+W AN L+ LM + +EPD +TYN+VIKG
Sbjct: 232 NGLWNLIVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + DMA++VY+AM G+ PN KIYQTMIHYLC+ G+F+LAY MCKD M+K W P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+DT+ LL+GL K Q +A +IM LV RRVP F S QL + KSIL
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
>gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/395 (62%), Positives = 299/395 (75%), Gaps = 9/395 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRFCH ++AA IA + + + KPLE PALVKLK+ERDP
Sbjct: 1 MLSLRHIRRFCHFPSSAAT-GIAYVSTESNQIQGL--------KPLEEPALVKLKSERDP 51
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKL+ LFKANA NR+VIEN++AFEDTVSRLAGA R D+IE LLEHQK+LPQGRREGFI+R
Sbjct: 52 EKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVR 111
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGM K A+DTF++M LYGCKR+VKS NAAL+VL+ + DL I FL + P K+
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D SFNI IK+FCE+GILD AY+ M EM+K G+ PDV+TYTTLISA YK R IG
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNL TFNVRIQ LVN+RR+W AN L+ LM + +EPD +TYN+VIKG
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + DMA++VY+AM G+ PN KIYQTMIHYLC+ G+F+LAY MCKD M+K W P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+DT+ LL+GL K Q +A +IM LV RRVP FS
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFS 386
>gi|297743432|emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/312 (74%), Positives = 265/312 (84%), Gaps = 5/312 (1%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLRP RRFCH AA A +A A S N DKPLE PALVKLKAERDP
Sbjct: 1 MLSLRPIRRFCHAAAITAIAPVAETVTSAKS-----NCIKKPDKPLEEPALVKLKAERDP 55
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
E+LFQLFKANAHNR+V+EN++AFEDTVSRLAGA RFDYIEHLLEHQK+LPQGRREGFI+R
Sbjct: 56 ERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREGFIVR 115
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGMIK A+DTFYDMHL+GC+RTVKS NAALKVLT+S DL+AI FL +VP KF
Sbjct: 116 IIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFKF 175
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ D+FS NIVIKA C+M IL+KAY+VM+EM+K GV PDV+TYTTLISAFYK NR E+G
Sbjct: 176 GIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVG 235
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNLATFNVRIQ+LVN+RR+WQAN LMG+M+ GI PDEVTYNLVIKG
Sbjct: 236 NGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKG 295
Query: 301 FCRSGHLDMAKK 312
FC++G+L+MAKK
Sbjct: 296 FCQAGYLEMAKK 307
>gi|357455193|ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486925|gb|AES68128.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 439
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/360 (61%), Positives = 268/360 (74%), Gaps = 1/360 (0%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
PAL LK+E DP KLF +FK+NA N IV+EN++AF DTVSRLAGA+RFDYIE LLE QK
Sbjct: 78 PALEALKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQKK 137
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
LPQ RREGF++RI+ LYG AGMI+HA++TFY M + C RTVKS NA L VL +SRD
Sbjct: 138 LPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDE 197
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTL 227
I FL EVP +F I+ D++S NI +KAFCE L +AYL M++ + GVKPDV+TYTTL
Sbjct: 198 ISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYTTL 257
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
ISAFY R EIGNGLWN MV KG PNL TFNVRIQ LV RR W ANKLM LMQR G+
Sbjct: 258 ISAFYDHKRWEIGNGLWNQMVLKGVMPNLHTFNVRIQFLVTVRRVWDANKLMALMQRNGV 317
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PDEVT LVIKGF R+G+ +MA +VYSA+ + + IYQTMIH LC+ GDF+ AY
Sbjct: 318 TPDEVTLVLVIKGFFRAGYPEMAMRVYSALHDKGYKISANIYQTMIHNLCKRGDFSQAYT 377
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+CKDSM+KNW P+VDTI LLEGLKK+ + KA I+AL + R P FS + L++ +SILS
Sbjct: 378 LCKDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIVALAEGRKPPFSFSYLASMQSILS 437
>gi|293334061|ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/361 (57%), Positives = 265/361 (73%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E P LV++K ERDPE+L+QLF+ANAHNR+++EN++AFED V+RLAGARR D +E +LE
Sbjct: 93 EQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQH 152
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K+LPQGRREGF++RI+ LYGKAGM HA+ TF +M +YGC RT KSLNA +KVL +R
Sbjct: 153 KALPQGRREGFVVRIIGLYGKAGMPGHALRTFQEMGMYGCPRTAKSLNATMKVLLRARMF 212
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ E PEK+ ++ D S N V+K FC+MG L AY VM M++ GV+PDVITYTT
Sbjct: 213 DEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYQVMQGMERAGVRPDVITYTT 272
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L++AFYK R E+G+GLWNLM +GC P LAT+NVRIQ LVN+ R WQAN+L M G
Sbjct: 273 LMAAFYKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANELARKMYVAG 332
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I+PDE+TYNL+IKGF G +MAK V+ AM GR PN K+YQTM+HYLC+ DF+LA+
Sbjct: 333 IKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAF 392
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+CKDSM+KNW PSVDTI+ LL+GL ++ IM LV R P +S ++ FK IL
Sbjct: 393 RLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSDGEMRVFKDIL 452
Query: 407 S 407
S
Sbjct: 453 S 453
>gi|115477108|ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 443
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/385 (54%), Positives = 276/385 (71%), Gaps = 7/385 (1%)
Query: 29 AVSLNKFPNREPLVDK------PLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYA 82
AV+ +K+ R P K P EPP LV++K ERDP +L++LF+ANAHNR++IEN++A
Sbjct: 54 AVASSKWRRRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELFRANAHNRLLIENRFA 113
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
FED V+RLAGARR D +E +LE K+LPQGRREGF++RI+ LYGKA M HA+ TF +M
Sbjct: 114 FEDAVARLAGARRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPDHALSTFREMG 173
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
LYGC RT KSLNA +KVL +R + L E E + ++ D S+N V+K C++G L
Sbjct: 174 LYGCPRTAKSLNATMKVLLRARLFDEVLQ-LFESSETYGVELDDISYNTVVKMMCDLGEL 232
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A+ VM EM+K GV+PDVITYTTL+ AFYK + E+G+GLWNLM +GC P LA++NVR
Sbjct: 233 RAAFRVMQEMEKAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVR 292
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
IQ LVN+RR WQAN L+ M G+ PDE+TYNLVIKGF G +MAK V+ AM GR
Sbjct: 293 IQFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGC 352
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN K+YQTM+HYLC+ +F+LA+ +CKDSM+KNW PSVDTI+ LL+GL ++ A
Sbjct: 353 KPNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNARE 412
Query: 383 IMALVQRRVPHFSSNQLSAFKSILS 407
IM LV R P +S++++ F+ ILS
Sbjct: 413 IMKLVIGRKPSYSNDEVKTFQDILS 437
>gi|125603901|gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/385 (54%), Positives = 276/385 (71%), Gaps = 7/385 (1%)
Query: 29 AVSLNKFPNREPLVDK------PLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYA 82
AV+ +K+ R P K P EPP LV++K ERDP +L++LF+ANAHNR++IEN++A
Sbjct: 126 AVASSKWRRRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELFRANAHNRLLIENRFA 185
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
FED V+RLAGARR D +E +LE K+LPQGRREGF++RI+ LYGKA M HA+ TF +M
Sbjct: 186 FEDAVARLAGARRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPDHALSTFREMG 245
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
LYGC RT KSLNA +KVL +R + L E E + ++ D S+N V+K C++G L
Sbjct: 246 LYGCPRTAKSLNATMKVLLRARLFDEVLQ-LFESSETYGVELDDISYNTVVKMMCDLGEL 304
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A+ VM EM+K GV+PDVITYTTL+ AFYK + E+G+GLWNLM +GC P LA++NVR
Sbjct: 305 RAAFRVMQEMEKAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVR 364
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
IQ LVN+RR WQAN L+ M G+ PDE+TYNLVIKGF G +MAK V+ AM GR
Sbjct: 365 IQFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGC 424
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN K+YQTM+HYLC+ +F+LA+ +CKDSM+KNW PSVDTI+ LL+GL ++ A
Sbjct: 425 KPNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNARE 484
Query: 383 IMALVQRRVPHFSSNQLSAFKSILS 407
IM LV R P +S++++ F+ ILS
Sbjct: 485 IMKLVIGRKPSYSNDEVKTFQDILS 509
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/357 (56%), Positives = 261/357 (73%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
LVK+K ERDPE+L+QLF+ NAHNR+++EN++AFED V+RLAGARR D +E +LE K+LP
Sbjct: 103 LVKIKHERDPERLYQLFRTNAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKALP 162
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
QGRREGF++RI+ LYGKAGM HA+ TF +M +YGC RT KSLNA +KVL ++
Sbjct: 163 QGRREGFVVRIIGLYGKAGMPSHALRTFQEMGMYGCPRTAKSLNATMKVLLRAQMFDEAL 222
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
E PEK+ ++ D S N V+K +C+MG L AY VM M+ GV+PDV+TYTTL++A
Sbjct: 223 WLFEEGPEKYGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTLMAA 282
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
FYK + E+G+GLWNLM +GC P LAT+NVRIQ L+N+ R WQAN+L+ M GI+PD
Sbjct: 283 FYKCGQREVGDGLWNLMRLRGCEPTLATYNVRIQFLINRERGWQANELVRKMYAVGIKPD 342
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
E+TYNL+IKGF G +MAK V+ AM GR PN K+YQTM+HYLC+ DF+LA+ CK
Sbjct: 343 EITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRFCK 402
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
DSM+KNW PSV+TI+ LL+GL ++ A IM LV R P +S ++ FK ILS
Sbjct: 403 DSMEKNWFPSVNTINQLLKGLMAISKDRNAREIMKLVTGRKPPYSDGEMKVFKDILS 459
>gi|357148282|ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/396 (51%), Positives = 274/396 (69%), Gaps = 1/396 (0%)
Query: 13 TAAAAAADAIALNNIRAVSLNKFPNR-EPLVDKPLEPPALVKLKAERDPEKLFQLFKANA 71
T A+ A + N R + N P E E P LV++K ERDP++L++LF+ANA
Sbjct: 47 TIASCRAAVVRSKNQRRRAPNDAPAAAEDKGSTDSETPLLVRIKHERDPKRLYELFRANA 106
Query: 72 HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMI 131
HNR+++EN++AF+D V+RL+GARR D +E +LE K+LPQGRREGF++RI+ LYGKA M
Sbjct: 107 HNRLLVENRFAFQDAVARLSGARRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMP 166
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+HA+ TF +M +YGC T KS NA LKVL +++ E P K+ ++ D S+N
Sbjct: 167 EHALRTFQEMEMYGCTCTNKSFNATLKVLMQAQLFDEALQLFEEGPGKYGVELDDISYNT 226
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
V+K C+MG L AY VM EM+K G++PDVITYTTL++AFYK+ + E+G+GLWNLM +G
Sbjct: 227 VVKMMCDMGELRAAYRVMQEMEKEGIQPDVITYTTLMAAFYKNGQREVGDGLWNLMRLRG 286
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P LA++NVRIQ L+N+RR WQAN L+ M GI PDE+TYNLVIKGF +MAK
Sbjct: 287 CMPTLASYNVRIQFLINRRRGWQANDLVRKMYAAGIRPDEITYNLVIKGFFMMREHEMAK 346
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
V+ AM GR PN KIYQTM+HYLC+ +F+LA+ +CKDSM+ NW PSVDTI LL+GL
Sbjct: 347 TVFGAMHGRGCKPNGKIYQTMVHYLCERREFDLAFRLCKDSMENNWFPSVDTIHHLLKGL 406
Query: 372 KKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
++ A IM LV R +S +++ AF+ ILS
Sbjct: 407 MSISKDRNAGEIMKLVMGRKSSYSGDEVRAFQDILS 442
>gi|413934837|gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/361 (51%), Positives = 247/361 (68%), Gaps = 16/361 (4%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E P LV++K ERDPE+L+QLF+ANAHNR+++EN++AFED V+RLAGARR D +E +LE
Sbjct: 179 EQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQH 238
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K+LP+G +G HA+ TF +M +YGC RT KSLNA +KVL +R
Sbjct: 239 KALPRGGGKG----------------HALRTFQEMGMYGCPRTAKSLNATMKVLLRARMF 282
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ E PEK+ ++ D S N V+K FC+MG L AY VM M++ G++ DVITY T
Sbjct: 283 DEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVMQGMERAGLRSDVITYMT 342
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L++AFYK R E+G+GLWNLM +G P LAT+NVRIQ LVN+ R WQAN++ + G
Sbjct: 343 LMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNRGRGWQANEMARKIYVAG 402
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I+PDE+TYNL+IKGF G +MAK V+ AM GR PN K+YQTM+HYLC+ DF+LA+
Sbjct: 403 IKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAF 462
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+CKDSM+KNW PSVDTI+ LL+GL ++ IM LV R P +S ++ FK IL
Sbjct: 463 RLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSYGEMKVFKDIL 522
Query: 407 S 407
S
Sbjct: 523 S 523
>gi|413934838|gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/354 (51%), Positives = 242/354 (68%), Gaps = 16/354 (4%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E P LV++K ERDPE+L+QLF+ANAHNR+++EN++AFED V+RLAGARR D +E +LE
Sbjct: 179 EQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQH 238
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K+LP+G +G HA+ TF +M +YGC RT KSLNA +KVL +R
Sbjct: 239 KALPRGGGKG----------------HALRTFQEMGMYGCPRTAKSLNATMKVLLRARMF 282
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ E PEK+ ++ D S N V+K FC+MG L AY VM M++ G++ DVITY T
Sbjct: 283 DEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVMQGMERAGLRSDVITYMT 342
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L++AFYK R E+G+GLWNLM +G P LAT+NVRIQ LVN+ R WQAN++ + G
Sbjct: 343 LMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNRGRGWQANEMARKIYVAG 402
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I+PDE+TYNL+IKGF G +MAK V+ AM GR PN K+YQTM+HYLC+ DF+LA+
Sbjct: 403 IKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAF 462
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
+CKDSM+KNW PSVDTI+ LL+GL ++ IM LV R P +S L+
Sbjct: 463 RLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSYASLA 516
>gi|414590555|tpg|DAA41126.1| TPA: hypothetical protein ZEAMMB73_459455 [Zea mays]
Length = 246
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 165/233 (70%)
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E PEK+ ++ + S N V+K FC+MG L AY VM M++ GV+PDVITYTTL++AFYK
Sbjct: 8 EGPEKYDVEVNDISCNTVVKMFCDMGDLRAAYRVMQGMERAGVRPDVITYTTLMAAFYKC 67
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R E+G+GLWNLM +GC P LAT+NVRIQ LVN+ R WQAN++ M GI+PDE+TY
Sbjct: 68 GRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANEMARKMYVAGIKPDEITY 127
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
NL+IKGF G +MAK V+ AM GR PN K+YQTM+HY+C+ DF+LA+ +CKD M+
Sbjct: 128 NLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNNKVYQTMVHYICERRDFDLAFRLCKDIME 187
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
KNW PSVDTI+ LL+GL ++ IM LV R P +S ++ FK ILS
Sbjct: 188 KNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSDGEMKVFKDILS 240
>gi|86438766|emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 162/210 (77%), Gaps = 2/210 (0%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E P LV++K ER+P++L++LF+ANAHNR+++EN++AF+D V+RL+GARR D +E +LE
Sbjct: 81 ETPLLVRIKNERNPKRLYELFRANAHNRLLVENRFAFQDAVARLSGARRNDLVEEILEQH 140
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K+LPQGRREGF++RI+ LYGKA M +HA+ TF +M +YGC T KS NA LKVL +++
Sbjct: 141 KALPQGRREGFVVRIIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLMQAQLF 200
Query: 167 -KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
KA+Q F E P K+ ++ D S+N V+K C+MG L AY VM EM+K G++PDVITYT
Sbjct: 201 DKALQLF-EEGPGKYGVELDDISYNTVVKMMCDMGQLRAAYRVMQEMEKEGIQPDVITYT 259
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
TL++AFYK+ + E+G+GLWNLM +GC P
Sbjct: 260 TLMAAFYKNGQREVGDGLWNLMRLRGCMPT 289
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ--- 283
+I + K PE + M GC +FN ++ L+ ++ +K + L +
Sbjct: 155 IIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFNATLKVLM---QAQLFDKALQLFEEGP 211
Query: 284 -RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++G+E D+++YN V+K C G L A +V M + P+ Y T++ + G
Sbjct: 212 GKYGVELDDISYNTVVKMMCDMGQLRAAYRVMQEMEKEGIQPDVITYTTLMAAFYKNG 269
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 197/327 (60%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER+ ++L Q FK ++ +E+TV RLA A+RF +IE +LE QK REG
Sbjct: 44 ERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREG 103
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +R++ LYGK+GM HA F +M C+R+V S NA L S+ I F E+
Sbjct: 104 FAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQEL 163
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P + D+ S+NI++ AFCEMG LD A V+ EM+K+G++PD+IT+ TL++AFY++
Sbjct: 164 PGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGS 223
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
G +W+LM PN+ ++N +++ ++++ R +A +L+ M+ GI+PD T N
Sbjct: 224 YADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNS 283
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++KGFC +G+L+ AK+ YS + L P R Y T+I +L ++GDF++A +CK+ +
Sbjct: 284 LMKGFCNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRR 343
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTI 383
W+ + +LEGL K ++ +A +
Sbjct: 344 WLIEPALLQQVLEGLVKESKIEEATEL 370
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 188/306 (61%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+E V LA A++F +IE +LEHQK + E F +R+M LYGKAGM +HA F ++
Sbjct: 60 YEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELP 119
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C+RTV S NA L V S+ I F E+P + D+ S+NI++ AFCEMG L
Sbjct: 120 KLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSL 179
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ EM+K+G++PD+IT+ TL++AFY++ G +W+LM PN+ ++N +
Sbjct: 180 DSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAK 239
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ ++++ R +A +L+ M+ GI+PD T N ++KGFC +G+L+ AK+ YS + L
Sbjct: 240 LRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 299
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P R Y T+I +L ++GDF++A +CK+ + W+ + +LEGL K ++ +A
Sbjct: 300 PPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATE 359
Query: 383 IMALVQ 388
++ L +
Sbjct: 360 LVELAK 365
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 187/306 (61%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+E V LA A++F +IE +LEHQK + E F +R+M LYGKAGM +HA F +
Sbjct: 21 YEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXP 80
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C+RTV S NA L V S+ I F E+P + D+ S+NI++ AFCEMG L
Sbjct: 81 KLNCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSL 140
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ EM+K+G++PD+IT+ TL++AFY++ G +W+LM PN+ ++N +
Sbjct: 141 DSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAK 200
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ ++++ R +A +L+ M+ GI+PD T N ++KGFC +G+L+ AK+ YS + L
Sbjct: 201 LRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 260
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P R Y T+I +L ++GDF++A +CK+ + W+ + +LEGL K ++ +A
Sbjct: 261 PPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATE 320
Query: 383 IMALVQ 388
++ L +
Sbjct: 321 LVELAK 326
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 182/304 (59%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+E V LA A++ +IE +LEHQ+ + E F +R+M LYG AGM HA F ++
Sbjct: 60 YEKAVLTLAKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELP 119
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C+RTV S NA L S+ I F E+P I D+ S+NI++ AFCEMG L
Sbjct: 120 KLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSL 179
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ EM+K+G++PD+IT+ TL++AFY++ G +W+LM PN+ ++N +
Sbjct: 180 DSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAK 239
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ ++++ R +A +L+ M+ GI+PD T N ++KGFC +G+L+ AK+ YS + L
Sbjct: 240 LRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 299
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P R Y T+I +L ++GDF +A +CK+ + W+ + +LEGL K ++ +A
Sbjct: 300 PPVRATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATE 359
Query: 383 IMAL 386
++ L
Sbjct: 360 LVEL 363
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 184/326 (56%), Gaps = 1/326 (0%)
Query: 48 PPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQK 107
PP+ V K ER +KL Q +K ++ + + V RL+ A++F +E LEHQK
Sbjct: 24 PPSTVNTK-ERKLQKLVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQK 82
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+ E F +R++ LYGKAGM+ HA F +M C RTV+S NA L +S
Sbjct: 83 NFADITNEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFD 142
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+Q FL + P K I D+ SFNIVIK +CE+G LD LV+ EM+K G++PD+IT+ TL
Sbjct: 143 KVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTL 202
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
++ FY + R G +W LM K PN+ ++N R++ L + R +A +L+G M+ GI
Sbjct: 203 LNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGI 262
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD ++YN VIKG C +++ K Y + MP+R Y T+I YL Q+GD + A
Sbjct: 263 RPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVE 322
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
+C + M K + + +++ L K
Sbjct: 323 LCIEIMNKGLLVNATLFQHVVDELVK 348
>gi|147767812|emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
Length = 396
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 208/359 (57%), Gaps = 5/359 (1%)
Query: 40 PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYI 99
PL K AL LK+E+DP+++ ++ +A A ++ AF +S+LA ++ FD I
Sbjct: 29 PLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSI 88
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
H L+ K+ P R E F+ ++L+G+AGM+ A+ TF MH G RTV+SLNA L
Sbjct: 89 RHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFS 148
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
+++ K +E P+ + I+ ++ S+N V+KAF E G Y ++ EM + GVKP
Sbjct: 149 CILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKP 208
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ ++ L++ FY + + E + +M P ++T+N+RIQ L ++S +A L+
Sbjct: 209 NATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALL 268
Query: 280 -GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G++ R ++P+ TY +I GFC+ G+LD AKK++ M+ R P+ Y T++++LCQ
Sbjct: 269 DGILAR-RMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQ 327
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
GDF A CK+ M+K W P++ T+++L+ GL ++ +A ++ ++ + FS N
Sbjct: 328 GGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQELIGQIKEK---FSRN 383
>gi|359494840|ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Vitis vinifera]
Length = 396
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 208/359 (57%), Gaps = 5/359 (1%)
Query: 40 PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYI 99
PL K AL LK+E+DP+++ ++ +A A ++ AF +S+LA ++ FD I
Sbjct: 29 PLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSI 88
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
H L+ K+ P R E F+ ++L+G+AGM+ A+ TF MH G RTV+SLNA L
Sbjct: 89 RHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFS 148
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
+++ K +E P+ + I+ ++ S+N V+KAF E G Y ++ EM + GVKP
Sbjct: 149 CILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKP 208
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ ++ L++ FY + + E + +M P ++T+N+RIQ L ++S +A L+
Sbjct: 209 NATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALL 268
Query: 280 -GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G++ R ++P+ TY +I GFC+ G+LD AKK++ M+ R P+ Y T++++LCQ
Sbjct: 269 DGILAR-RMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQ 327
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
GDF A CK+ M+K W P++ T+++L+ GL ++ +A ++ ++ + FS N
Sbjct: 328 GGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQIKEK---FSRN 383
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 212/359 (59%), Gaps = 9/359 (2%)
Query: 37 NREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF 96
++ PL K AL LK+E+DP+++ ++ +A + ++ AF V LA + F
Sbjct: 37 SKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCHIDRIAFSAAVENLAEKKHF 96
Query: 97 DYIEHLL----EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
+ +LL E+++ L + E F ++LY +A M+ H++ F D+ + RTVKS
Sbjct: 97 SAVSNLLDGFIENRQDL---KSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEIPRTVKS 153
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
LNA L ++D K + +E+P+ + I+ D+ ++N +IK FCE G +Y ++ EM
Sbjct: 154 LNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEM 213
Query: 213 QKLGVKPDVITYTTLISAFY-KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
++ G+KP+ ++ +IS FY +D E+G L +M +G ++T+N+RIQ L +++
Sbjct: 214 ERKGIKPNSSSFGLMISGFYSEDKNDEVGKVLV-MMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
S +A L+ M G++P+ VTY+ +I+GFC + AKK++ M+ R P+ + Y T
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFT 332
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+I+YLC+ GDF A ++CK+SM+KNWVPS + +L+ GL K+++ +A ++ V+ +
Sbjct: 333 LIYYLCKGGDFETALVLCKESMEKNWVPSFSIMKSLVNGLAKDSKVDEAKELIGQVKEK 391
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 208/355 (58%), Gaps = 1/355 (0%)
Query: 37 NREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF 96
++ PL K AL LK+E+DP+++ ++ +A + ++ AF V LA + F
Sbjct: 37 SKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHF 96
Query: 97 DYIEHLLE-HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
+ +LL+ ++ P + E F ++LY +A M+ H++ F D+ + RTVKSLNA
Sbjct: 97 SAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNA 156
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L ++D K + +E+P+ + I+ D+ ++N +IK FCE G +Y ++ EM++
Sbjct: 157 LLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERK 216
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+KP+ ++ +IS FY +++ + + +M +G ++T+N+RIQ L +++S +A
Sbjct: 217 GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L+ M G++P+ VTY+ +I GFC + AKK++ M+ R P+ + Y T+I+Y
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYY 336
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LC+ GDF A +CK+SM+KNWVPS + +L+ GL K+++ +A ++ V+ +
Sbjct: 337 LCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 208/393 (52%), Gaps = 21/393 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
+SLR RRF A+AAA + +S++K A L+ E DP+
Sbjct: 22 ISLRLVRRF---ASAAADGTTTAPSSGKISVSK---------------AKSTLRKEHDPD 63
Query: 62 KLFQLF-KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K +++ + H+ + ++YA E TV RLA RRF IE L+E K+ P+ + E F
Sbjct: 64 KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYST 123
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ YG+A M HAM TF M YG R+ S NA L S++ + E+P+++
Sbjct: 124 LIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRY 183
Query: 181 H-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ I D S+ I+IK++C+ G +KA +M +MQ G++ I +TT++S+ YK E+
Sbjct: 184 NKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV 243
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ LWN MV KGC + A +NVRI K + +L+ M G++PD ++YN ++
Sbjct: 244 ADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMT 302
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+C G LD AKKVY + G PN ++T+I +LC + Y + K S+ + +P
Sbjct: 303 AYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIP 362
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+T+ L+ GL +N + A ++ V+++ P
Sbjct: 363 DFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFP 395
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 192/343 (55%)
Query: 44 KPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL 103
K + P L E +KL Q F N+ ++ ++ TV LA ++F IE ++
Sbjct: 38 KSKKSPTATPLTDENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEII 97
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
E QK + + EGF++R++ LYGKAGM A F ++ C+RTV+S NA L +S
Sbjct: 98 EAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKS 157
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
++ ++ EVP++ I+ D+ S+NIVI A+CEM DKA L M+K G++PD++T
Sbjct: 158 KEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVT 217
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ TL++A Y+ + G +W M K P+L ++N R++ +V +R +L+ M+
Sbjct: 218 FNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKME 277
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
I+PD YN +I FC+ G L+ AKK Y + + PN Y+T++ LC++GDF+
Sbjct: 278 EKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFD 337
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+CK+++ K +V + +++GL + ++ +A ++ L
Sbjct: 338 SGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVEL 380
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 206/393 (52%), Gaps = 21/393 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
+SLR RRF AA A + I S++K A L+ E DP+
Sbjct: 6 ISLRLVRRFASAAADGTTTAPSSGKI---SVSK---------------AKSTLRKEHDPD 47
Query: 62 KLFQLF-KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K +++ + H+ + ++YA E TV RLA RRF IE L+E K+ P+ + E F
Sbjct: 48 KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYST 107
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ YG+A M HAM TF M YG R+ S NA L S++ + E+P+++
Sbjct: 108 LIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRY 167
Query: 181 H-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ I D S+ I+IK++C+ G +KA +M +MQ G++ I +TT++S+ YK E+
Sbjct: 168 NKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV 227
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ LWN MV KGC + A +NVRI K + +L+ M G++PD ++YN ++
Sbjct: 228 ADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMT 286
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+C G LD AKKVY + G PN ++T+I +LC + Y + K S+ + +P
Sbjct: 287 AYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIP 346
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+T+ L+ GL +N + A ++ V+++ P
Sbjct: 347 DFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFP 379
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 184/330 (55%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER+ ++L Q FK ++ +E+TV RLA A+RF +IE +LE QK REG
Sbjct: 36 ERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREG 95
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +R++ LYGK+GM HA F +M C+R+V S NA L S+ ++ F E+
Sbjct: 96 FAVRLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSEL 155
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P K ++ D+ S+NIVI C+MG +D A ++ EM+K ++PD+IT+ TL++ Y R
Sbjct: 156 PSKLSVEPDLVSYNIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGR 215
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
G +W M K P++ ++N ++ LV+++R + L+ MQ GI+PD ++N
Sbjct: 216 FLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNA 275
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+IKGFC G +D A Y M +P++ + T++ C++G F+ A+ +CK+ +
Sbjct: 276 LIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRK 335
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ + ++GL K + +A ++ L
Sbjct: 336 CLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 365
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 191/337 (56%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A L AE + + F N ++ K F+ TV LA ++F IE ++E QK
Sbjct: 44 AATPLTAEEHLQNIVDKFIKNTESQRFRHKKGTFDSTVRLLAVRKKFSLIEDIIEAQKKY 103
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
+ EGF R++ LYGKAGM HA F ++ C+RTVKS N+ L +S++ +
Sbjct: 104 EDIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKEFDQV 163
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+ EVP++ I+ D+ S+NIVI AFCEM LDKA L +M+K G++P+++T+ TL++
Sbjct: 164 EKIFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLT 223
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
A Y+ + G +W M K P+L ++N R++ +V ++R +L+ M+ I+P
Sbjct: 224 ALYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKP 283
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D +YN++IKGFC+ G L+ AKK Y + + P Y+ ++ LC++GDF+ +C
Sbjct: 284 DVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLC 343
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
K+++ K +V + ++ GL + ++ +A ++ L
Sbjct: 344 KEAIDKGFVFHTAEVQRVVNGLAEVSKIEEAKDLVEL 380
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 192/338 (56%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A L AE + + F N ++ K ++ TV LA ++F IE ++E QK
Sbjct: 1281 AATPLTAEEHLQNIVDKFIKNTESQRFRHQKGTYDSTVRLLAVRKKFSLIEDIIEAQKKY 1340
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
+ EGF R++ LYGKAGM HA F ++ C+RTVKS N+ L +S++L +
Sbjct: 1341 EDIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKELDQV 1400
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+ EVP++ I+ D+ S+NIVI AFCEM LDKA L +M+K G++P+++T+ TL++
Sbjct: 1401 EKIFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVTFNTLLT 1460
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
A Y+ + G +W M K P+L ++N R++ +V ++R +L+ M+ I+P
Sbjct: 1461 ALYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKMEEKEIKP 1520
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D +YN++IKGFC+ G L+ AKK Y + + P Y+ ++ LC++GDF+ +C
Sbjct: 1521 DVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFDSGLQLC 1580
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
K+++ K +V + +++GL + ++ +A + L
Sbjct: 1581 KEAIDKGFVFHTAEVQRVVDGLAEVSKTEEAKDLSRLT 1618
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 209/391 (53%), Gaps = 20/391 (5%)
Query: 1 MLSLRPNRR----FCHTAAAAAA---DAIALNNIRAVSLNKFPNREPLVDKPLEPPALVK 53
M S P RR F H+ + A A ++L+++ K P PL D
Sbjct: 858 MSSSSPFRRLHCLFNHSRSPAPAFNKPNLSLSSLATKKSKKSPTATPLTD---------- 907
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
E +KL Q F N+ ++ ++ TV LA ++F IE ++E QK + +
Sbjct: 908 ---ENRLQKLVQRFIINSESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIK 964
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
EGF++R++ LYGKAGM A F ++ C+RTV+S NA L +S++ ++
Sbjct: 965 EEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIF 1024
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
EVP++ I+ D+ S+NIVI A+CEM DKA L M+K G++PD++T+ TL++A Y+
Sbjct: 1025 REVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYR 1084
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ G +W M K P+L ++N R++ +V +R +L+ M+ I+PD
Sbjct: 1085 KGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHI 1144
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
YN +I FC+ G L+ AKK Y + + PN Y+T++ LC++GDF+ +CK+++
Sbjct: 1145 YNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAI 1204
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K +V + +++GL + ++ +A ++
Sbjct: 1205 NKRFVFHTAEVQRVVDGLAEVSKTEEAKDLL 1235
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 206/386 (53%), Gaps = 32/386 (8%)
Query: 30 VSLNKFPNREPLVDKP-LEPPALVK----------LKAERDPEKLFQLFKANAHNRIVIE 78
+SLN+ P V+KP PP+ K L +E+ +KL + F N+ +
Sbjct: 1652 LSLNEAPGS---VNKPNPSPPSATKKCNKSTAATPLTSEQGLQKLVKRFIKNSESEKFRR 1708
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ TV LA ++F IE ++E QK + + EGF +R++ LYGKAGM HA F
Sbjct: 1709 KNDTYFSTVRLLAIHKKFSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLF 1768
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLK------------------AIQAFLMEVPEKF 180
++ C+RTVKS NA L S++ + ++ EVP++
Sbjct: 1769 DELPELNCERTVKSFNALLTSCANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEV 1828
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ D+ S+NIVI A+C+MG LDKA L +M+K G +P+++T+ TL++A Y + G
Sbjct: 1829 SIEADVVSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDG 1888
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+W M K P+L ++N R+Q +V ++R +L+ M+ I+P+ +Y ++I+G
Sbjct: 1889 ESMWARMENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEG 1948
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC G L+ AK+ Y + + PN IY+T++ C++GDF+ +CK+S V
Sbjct: 1949 FCEDGDLEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFL 2008
Query: 361 VDTISALLEGLKKNNQPCKANTIMAL 386
+ + +++GL + ++ +A ++AL
Sbjct: 2009 AEEVQRVVDGLIEVSKIEEAKDLVAL 2034
>gi|359496216|ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 184/331 (55%), Gaps = 1/331 (0%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER+ ++L Q FK ++ +E+TV RLA A+RF +IE +LE QK REG
Sbjct: 36 ERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREG 95
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +R++ LYGK+GM HA F +M C+R+V S NA L S+ ++ F E+
Sbjct: 96 FAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSEL 155
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P K ++ D+ S+NIVIK C+MG +D A ++ EM+K ++PD+IT+ TL++ Y R
Sbjct: 156 PSKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGR 215
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYN 295
G +W M K P++ ++N ++ LV +++R + L+ MQ GI+PD ++N
Sbjct: 216 FLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFN 275
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+IKGFC G +D A Y M P++ + T++ C++G F+ A+ +CK+ +
Sbjct: 276 ALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNR 335
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ + ++GL K + +A ++ L
Sbjct: 336 KCLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 366
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 193/340 (56%), Gaps = 3/340 (0%)
Query: 54 LKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
L++E DP++ +++ + + H + ++YA + TV RLA +RRF IE L+E K+ P+
Sbjct: 46 LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 105
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+E ++ ++ YG AGM +HA+ TF M G R+ S NA L +S+ + F
Sbjct: 106 TQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKF 165
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
E+P ++ I D S+ I++K++CE G+ DKA ++ EM++ GV+ +T+TT++ A Y
Sbjct: 166 FEEIPRRYGIXPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALY 225
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K + + +W+ M KGC ++ +NV+I + L+ M G++PD +
Sbjct: 226 KQGQSDRAEKVWHEMAKKGCL-DVGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDTI 283
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+YN ++ +C+SG +D AKKVY+ + PN ++T+I+YLC+ GDF Y + K S
Sbjct: 284 SYNYLMTSYCKSGMMDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQS 343
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ +P T+ L+EGL + + +A ++ V++ P
Sbjct: 344 AFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFP 383
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 179/345 (51%), Gaps = 23/345 (6%)
Query: 7 NRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQL 66
NR FC A A IA + IR++S + + VKLK + +
Sbjct: 6 NRAFC--TATEPATTIAAS-IRSISEDLYKE--------------VKLK------NVVEK 42
Query: 67 FKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG 126
FK + N + +EDTV RLAGARRF ++ +LEHQK EGF R++ LYG
Sbjct: 43 FKKASDNDRFRKKTGIYEDTVRRLAGARRFRWVRDILEHQKQYSDISNEGFSARLISLYG 102
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+GM KHA F +M C RTV SLNA L S +Q ++P + I+ D+
Sbjct: 103 KSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQLSIKPDL 162
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +IKAFCE G D A V+ E+++ G+ PD IT+ TL+ Y R E G +W
Sbjct: 163 VTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQ 222
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M P + ++ ++ L +++ +A +L M++ G++PD N VIKGF G+
Sbjct: 223 MSVNNVAPGVRSYCSKLVGLAEVKKAGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGN 282
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
LD AKK + + P++ Y ++ +LC++GDF A MCK+
Sbjct: 283 LDEAKKWFGEIAKSEYDPDKNTYSIIVPFLCEKGDFKTAIEMCKE 327
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 201/393 (51%), Gaps = 21/393 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
+SLR RRF AA A + I S++K A L+ E DP+
Sbjct: 6 ISLRLVRRFASAAADGTTTAPSSGKI---SVSK---------------AKSTLRKEHDPD 47
Query: 62 KLFQLF-KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K +++ + H+ + ++YA E TV RLA RRF IE L+E K+ P+ + E F
Sbjct: 48 KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYST 107
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ YG+A M HAM TF M YG R+ S NA L S+ + E+P+++
Sbjct: 108 LIRSYGRASMFDHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKKFDKVPQLFDEIPQRY 167
Query: 181 H-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ I D S+ I+IK++C+ G KA +M +MQ G++ I +TT++S+ YK E+
Sbjct: 168 NKIVPDKISYGILIKSYCDSGSPQKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV 227
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
LWN MV KGC + A +NVRI K + +L+ M G++PD ++YN ++
Sbjct: 228 AESLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSTMGLKPDTISYNYLMT 286
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+C G LD AKKVY + G PN ++T+I +LC + Y + K S+ + +P
Sbjct: 287 AYCEKGMLDEAKKVYEGLEGNNCAPNSATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIP 346
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+T+ L GL + + A ++ V+++ P
Sbjct: 347 DFNTLKHLAVGLVEKKKIDDAKGLIRTVKKKFP 379
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 165/273 (60%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+E V LA A++F +IE +LEHQK + E F +R++ LYGKAGM +HA F +M
Sbjct: 173 YEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMP 232
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C+RTV S NA L S+ I F E+P I D+ S+NI++ AFCEMG L
Sbjct: 233 KLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSL 292
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ EM+K+G++PD+IT+ TL++ FY+ G +W+LM PN+ ++N +
Sbjct: 293 DSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAK 352
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ ++++ R +A L+ M+ GI+PD T N ++KGFC +G+L+ AK+ +S + L
Sbjct: 353 LRGVISENRMSEAVNLIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAINEL 412
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
P R Y +I +L ++ DF +A +CK+ +K
Sbjct: 413 PPVRATYMRLIPFLVEKDDFEMATELCKEVFQK 445
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
A+ L +++ I+ L + I ++F+ + I + + G+ + A+ + EM KL
Sbjct: 176 AVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRL-ITLYGKAGMFEHAHKLFDEMPKL 234
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWN-LMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
+ V+++ L+SA + + +G + L G P++ ++N+ +
Sbjct: 235 NCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDS 294
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
A ++ M++ G+EPD +T+N ++ F +SG +K++ M + PN + Y +
Sbjct: 295 ALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLR 354
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGL 371
+ E + A + D MK + + P V T+++L++G
Sbjct: 355 GVISENRMSEA-VNLIDEMKTSGIKPDVFTLNSLMKGF 391
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 193/340 (56%), Gaps = 3/340 (0%)
Query: 54 LKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
L++E DP++ +++ + + H + ++YA + TV RLA +RRF IE L+E K+ P+
Sbjct: 44 LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 103
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+E ++ ++ YG AGM +HA+ TF M G R+ S NA L +S+ + F
Sbjct: 104 TQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKF 163
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
E+P ++ + D S+ I++K++CE G+ DKA ++ EM++ GV+ +T+TT++ A Y
Sbjct: 164 FEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALY 223
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K + + +W+ M KGC ++ +NV+I + L+ M G++PD +
Sbjct: 224 KQGQSDRAEKVWHEMAKKGCL-DVGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDTI 281
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+YN ++ +C+SG +D AKKVY+ + PN ++T+I+YLC+ GDF Y + K S
Sbjct: 282 SYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQS 341
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ +P T+ L+EGL + + +A ++ V++ P
Sbjct: 342 AFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFP 381
>gi|147791424|emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
Length = 383
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 183/331 (55%), Gaps = 1/331 (0%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER+ ++L Q FK ++ +E+TV RLA A+RF +IE +LE QK REG
Sbjct: 36 ERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREG 95
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +R++ LYGK+GM HA F +M C+R+V S N L S+ ++ F E+
Sbjct: 96 FAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSEL 155
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P K ++ D+ S+NIVIK C+MG +D A ++ EM+K ++PD+IT+ TL++ Y R
Sbjct: 156 PSKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGR 215
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYN 295
G +W M K P++ ++N ++ LV +++R + L+ MQ GI+PD ++N
Sbjct: 216 FLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFN 275
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+IKGFC G +D A Y M P++ + T++ C++G F+ A+ +CK+ +
Sbjct: 276 ALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNR 335
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ + ++GL K + +A ++ L
Sbjct: 336 KCLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 366
>gi|338762831|gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 195/347 (56%), Gaps = 8/347 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A +L+ DP+K +++ + + N + ++Y E TV RLA + RF IE LE K+
Sbjct: 46 AKSQLRYVYDPDKALEIYSSVSPNYTSPLSSRYTQEYTVRRLAKSHRFSDIESFLESHKN 105
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P+ +E F+ ++ YG AGM HA+ TF +M G R+ S NA L S++
Sbjct: 106 DPKITQEPFLSSLIRSYGLAGMFDHALKTFNEMDDLGTPRSTVSFNALLSACNSSKNFGR 165
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
EVP+++ + D FS+ +IKA+CEMG + A + EM++ G++ +T+TT++
Sbjct: 166 APELFDEVPQRYGLSPDKFSYGNLIKAYCEMGSPESALERLKEMEEKGIEITAVTFTTIM 225
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF--- 285
+FYK + E +W+ MV +GC ++ +NVRI H+ + + + GL++
Sbjct: 226 HSFYKKGKNEEAERVWSEMVKRGCPIDVGAYNVRIMHIHGE----DPDSVKGLIEEISSA 281
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G++PD ++YN ++ +C+SG +D A KVY + G PN ++T+I YLC+ F
Sbjct: 282 GLKPDTISYNYLMTSYCKSGMMDEAFKVYEDLEGNGCKPNAATFRTLIFYLCKRQRFETG 341
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
Y + K+S+ + +P +T+ LLEGL K ++ +A ++ V+++ P
Sbjct: 342 YKVFKESVAVHKIPDFNTLKHLLEGLVKRSKFKEAKGMIRTVKKKFP 388
>gi|21553755|gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 204/354 (57%)
Query: 37 NREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF 96
++ PL K AL LK+E+DP+++ ++ +A + ++ AF V LA F
Sbjct: 37 SKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCHIDRIAFSAAVENLAEKNHF 96
Query: 97 DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA 156
+ +LL+ + E F ++LY +A M+ H++ F D+ + RTVKSLNA
Sbjct: 97 SAVSNLLDGFIENRHLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNAL 156
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L ++D K + +E+P+ + I+ D+ ++N +IK FCE G +Y ++ EM++ G
Sbjct: 157 LFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKG 216
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+KP+ ++ +IS FY +++ + + +M +G ++T+N+RIQ L K++S +A
Sbjct: 217 IKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKARGVNIGVSTYNIRIQSLCKKKKSKEAK 276
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L+ M G++P+ VTY+ +I GFC + AKK++ M+ R P+ + Y T+I+YL
Sbjct: 277 ALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYL 336
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C+ GDF A +CK+SM+KNWVPS + +L+ GL K+++ +A ++ V+ +
Sbjct: 337 CKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 390
>gi|156070795|gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 193/345 (55%), Gaps = 4/345 (1%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV--IENKYAFEDTVSRLAGARRFDYIEHLLEHQK 107
A KLKAE DP+K +++ ++ +R V + ++YA E TV RLA + RF IE+ LE K
Sbjct: 36 AKSKLKAEHDPDKALEIY-SSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIENFLESHK 94
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+ P+ +E F+ I+ YG AGM HA+ ++ M G R+ S N L S+
Sbjct: 95 NSPKITQEPFLSSIIRSYGVAGMFDHALKIYHQMDDLGTPRSAISFNVLLSACVRSKLYD 154
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E+P K+ D S+ I+I+++CEMG + A + EM++ GV+ +T+TT+
Sbjct: 155 RVPQLFDEIPVKYGFLPDKVSYGILIRSYCEMGSPEMAMERLKEMEEKGVEITSVTFTTI 214
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ +FYK + + +WN MV +GC P++ +NV+I + + L+ M G+
Sbjct: 215 LHSFYKKRKSDEAEKVWNEMVNRGCGPDVGAYNVKIMN-IQGGDPEGVKALIEEMNDAGL 273
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD ++YN ++ +CR+ +D A+KVY + PN ++T+I YLC++G F Y
Sbjct: 274 KPDTISYNYLMTCYCRNELIDEAQKVYDDLEKNGCNPNAATFRTLIFYLCKKGRFETGYK 333
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ K+S+K +P DT+ L+EGL K ++ A + V+++ P
Sbjct: 334 VFKESVKVQKIPDFDTLKYLVEGLAKKSKLKDAKGMCRTVKKKFP 378
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 192/344 (55%), Gaps = 2/344 (0%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A KLKAE DP+K+ +++ + + I + ++YA E TV RLA + RF IE LE K+
Sbjct: 34 AKSKLKAEHDPDKVLEIYSSVSDRYISPLSSRYAQEYTVKRLAKSHRFSDIESFLESHKN 93
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
+ +E F+ I+ YG AGM HA+ + M G R+ S N L ++
Sbjct: 94 SSKITQEPFLSSIIRSYGIAGMFDHALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDR 153
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ E+P K+ D S+ I+I+++CEMG+ +KA + EM++ GV+ IT+TTL+
Sbjct: 154 VRQLFDEMPVKYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLL 213
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
AFYK + +WN MV KGC P++ +NV+I++ + L+ M G++
Sbjct: 214 HAFYKKGMGDEAEKVWNEMVNKGCGPDVGAYNVKIRN-IQGGDPEGVKALIEEMNNAGLK 272
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD ++YN ++ +C +G +D A+KVY + PN ++++I YLC++G F Y +
Sbjct: 273 PDTISYNYLMTCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKV 332
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
K+S++ N +P +T+ L+EGL K + A + V+++ P
Sbjct: 333 FKESVRVNKMPDFNTLKCLVEGLVKREKLKDAKGMSRTVKKKFP 376
>gi|449454724|ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 197/358 (55%), Gaps = 3/358 (0%)
Query: 40 PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYI 99
PL K AL LK E +PE++ + +A + ++ AF +S+L+ + FD I
Sbjct: 38 PLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGI 97
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
LE KS P + E F ++LYG+A M+ HA+ TF + G + +VK+LNA L
Sbjct: 98 RRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFA 157
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
++D K ++ ME P+ + I+ DI ++N VIKAF E G ++ EM + VKP
Sbjct: 158 CNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKP 217
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ T+ ++ Y + + E + NLM G +AT+N RI+ L +RS +A L
Sbjct: 218 NATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALF 277
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M G++P+ VTY +I GFC+ G+LD AK ++ M+ P+ + Y T+ ++LC+
Sbjct: 278 DGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRG 337
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
GD+ A+ +C +SMKK WVP+ T+ +L++GL ++ +A ++ ++ R FS N
Sbjct: 338 GDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQIKER---FSKN 392
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 184/334 (55%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER ++L + FK + N ++DT+ RLA A++F Y+E +LE+QK +EG
Sbjct: 36 ERSLKRLVEKFKKASENERFRTKSAIYKDTIRRLAAAKKFRYVEEILENQKQYQDMSKEG 95
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F R++ LYG +GM +A F +M C RTV S NA L S+ + +
Sbjct: 96 FNARLISLYGSSGMFDNARKVFDEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGL 155
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E+ I+ D+ S+N V+KAFCEMG LD A ++ E++K G+KPD+IT+ TL++ Y + R
Sbjct: 156 SEELEIEPDLVSYNTVMKAFCEMGSLDSAVSLLDEIEKKGLKPDLITFNTLLNGLYANGR 215
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ G +W M K P+ ++N ++ L ++R A K++ M+ GIE D +YN
Sbjct: 216 FDAGERIWQRMKEKNVKPDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGIEFDIFSYNA 275
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I+GF G L+ AK Y + + P++ ++T+I ++ ++GD A+ +CKD++
Sbjct: 276 LIRGFVNEGDLEEAKGWYGEIRKSDIKPDKLTFKTLIPFVVEKGDVAFAFDLCKDALSSK 335
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
I +L+ L K ++ +A ++ L + R
Sbjct: 336 LAVKEALIQPVLDALAKESKINEAKELVELSKAR 369
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 160/304 (52%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+EDTV RLAGARRF +I +LEHQK EGF R++ LYGK+GM KHA F +M
Sbjct: 61 YEDTVRRLAGARRFRWIRDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMP 120
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C RTV SLNA L SR + ++P + I+ D+ ++N +IKAFCE G
Sbjct: 121 QRNCSRTVLSLNALLAAYLHSRKYDIVGELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSF 180
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V E+++ G+ PD IT+ TL+ Y R E G +W M K P + ++ +
Sbjct: 181 DSALSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMGVKNVAPGVRSYCSK 240
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L ++ +A L M++ G++PD N VIKGF G+LD AKK + +
Sbjct: 241 LVGLAEVKKMGEAVVLFREMEKLGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKFEY 300
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P+R Y ++ +LC++GDF A MCK+ + +++ L +A
Sbjct: 301 DPDRNTYSIIVPFLCEKGDFKTAIDMCKEIFNNRCRVDATLLQGVVDKLASEGMDTEAKE 360
Query: 383 IMAL 386
I+ +
Sbjct: 361 IVEI 364
>gi|449479644|ref|XP_004155662.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 202/376 (53%), Gaps = 30/376 (7%)
Query: 40 PLVDKP-LEPPALVK----------LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVS 88
P V+KP PP+ K L +E+ +KL + F N+ + + TV
Sbjct: 22 PRVNKPNPSPPSATKKCNKSTAATPLTSEQGLQKLVKRFIKNSESEKFRRKNDTYFSTVR 81
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
LA ++F IE ++E QK + + EGF +R++ LYGKAGM HA F ++ C+R
Sbjct: 82 LLAIHKKFSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCER 141
Query: 149 TVKSLNAALKVLTESRDLKAIQA------------------FLMEVPEKFHIQFDIFSFN 190
TVKS NA L S++ + ++ EVP++ I+ D+ S+N
Sbjct: 142 TVKSFNALLTSCANSKEFEQLETMFREIPCANSKEFDQLETIFREVPQEVSIEADVVSYN 201
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IVI A+C+MG LDKA L +M+K G +P+++T+ TL++A Y + G +W M K
Sbjct: 202 IVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENK 261
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
P+L ++N R+Q +V ++R +L+ M++ I+P+ +Y ++I+GFC G L+ A
Sbjct: 262 NIAPDLISYNARLQRMVLEKRIQDGIQLLAEMEK-AIKPNVDSYYILIEGFCEDGDLEQA 320
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+ Y + + PN IY+T++ C++GDF+ +CK+S V + + +++G
Sbjct: 321 KQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLQLCKESFDNGLVFLAEEVQRVVDG 380
Query: 371 LKKNNQPCKANTIMAL 386
L + ++ +A ++AL
Sbjct: 381 LIEVSKIEEAKDLVAL 396
>gi|255555097|ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542431|gb|EEF43973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 189/335 (56%), Gaps = 2/335 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
L ER+ ++L + FK + N +E+T+ RLA A+RF++IE +LE QK
Sbjct: 32 LYKERNLKRLVEKFKKFSENDRFRTKTGIYEETIRRLAIAKRFNWIEEILEDQKKYKDIH 91
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+EG+ R++ LYGK+ M ++ F +M CKRTV S NA L S+ +
Sbjct: 92 KEGYNARLIRLYGKSNMFDNSRKVFDEMPDRNCKRTVVSFNALLAACVTSKKFDEVDGLF 151
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
++P++ I+ D S+N VIK +CEMG LDKA ++VEM+ G PD+IT+ TL++ FY
Sbjct: 152 RKLPKELEIKPDTVSYNTVIKGYCEMGALDKAISLLVEMEMKGNPPDLITFNTLLNGFYS 211
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ G +W+ MV K P++ ++N ++ L +R+ A L+ M+ GI+PD ++
Sbjct: 212 NGLFVDGERIWSQMVQKSIVPDIRSYNAKLLGLALVKRTKDAVLLLQEMKSKGIKPDVIS 271
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAM--LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+N +IKGF + +L+ AK Y G P++ + T+I ++C++GD A+ + KD
Sbjct: 272 FNALIKGFVKEENLEEAKYWYCETRNSGGDCGPDKFTFTTLIPFVCEKGDLRFAFELSKD 331
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ + + + + ++EGL K ++ AN ++ L
Sbjct: 332 VISRKCLVDMALLKCVVEGLVKESKIQDANELVKL 366
>gi|356555650|ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Glycine max]
Length = 388
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 187/337 (55%), Gaps = 3/337 (0%)
Query: 36 PNRE-PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGAR 94
PN PL K A+ LK+E +PE++ + +A A ++ AF VS+LA A
Sbjct: 18 PNSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAALTPDSHIDRRAFSLAVSKLAAAH 77
Query: 95 RFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLN 154
F I L+ K+ P R E F+ ++LYG+A M+ HA+ TF + R+VK+LN
Sbjct: 78 HFAGIRTFLDDLKTRPDLRNEKFLSHAIVLYGQANMLDHAIRTFTED--LPSPRSVKTLN 135
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
+ L +++ K + +E P+ + IQ ++ ++N VIKAF E G Y V+ EM K
Sbjct: 136 SLLFAALLAKNYKELTRIYLEFPKTYSIQPNLDTYNTVIKAFAESGSTSSVYSVLAEMDK 195
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
+ P+V T +S FY++ + + + LM FP+++T+NVRIQ L +RS +
Sbjct: 196 NNIAPNVTTLNNSLSGFYREKKFDDVGKVLKLMEKYSVFPSISTYNVRIQSLCKLKRSSE 255
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
A L+ M G +P+ V+Y +I GFC+ G L+ AK+++ M R +P+ + Y T++H
Sbjct: 256 AKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFRDMKRRGYLPDGECYFTLVH 315
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+LC G+F A + K+ M K WVP+ T+ +L+ GL
Sbjct: 316 FLCCGGEFEAALEVAKECMGKGWVPNFTTMKSLVNGL 352
>gi|15222796|ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14 [Arabidopsis thaliana]
gi|18650654|gb|AAL75896.1| At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis thaliana]
gi|332195194|gb|AEE33315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 196/366 (53%), Gaps = 9/366 (2%)
Query: 32 LNKFPNREPLVDKP------LEPP--ALVKL-KAERDPEKLFQLFKANAHNRIVIENKYA 82
+ +F + +V +P + PP +L L ER+P+++ + FK + N
Sbjct: 17 IRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAV 76
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
++ TV RL A+R Y+E +LE QK +EGF RI+ LYGKAGM ++A F +M
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMP 136
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
CKR+V S NA L S+ ++ E+P K I+ DI S+N +IKA CE L
Sbjct: 137 NRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSL 196
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A ++ E++ G+KPD++T+ TL+ + Y + E+G +W MV K ++ T+N R
Sbjct: 197 PEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNAR 256
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L N+ +S + L G ++ G++PD ++N +I+G G +D A+ Y ++
Sbjct: 257 LLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGY 316
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P++ + ++ +C+ GDF A + K++ K ++ T+ L++ L K ++ +A
Sbjct: 317 RPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEE 376
Query: 383 IMALVQ 388
I+ + +
Sbjct: 377 IVKIAK 382
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 154/268 (57%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+EDTV RLAGA+RF ++ ++EHQKS EGF R++ LYGK+ M +HA F +M
Sbjct: 56 YEDTVRRLAGAKRFRWVRDIIEHQKSYADISNEGFSARLITLYGKSNMHRHAQKLFDEMP 115
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C+R+V SLNA L S+ ++ ++P + ++ D+ S+N IKA E G
Sbjct: 116 QRNCERSVLSLNALLAAYLHSKQYDVVERLFKKLPVQLSVKPDLVSYNTYIKALLEKGSF 175
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ EM+K GV+ D+IT+ TL+ Y R E G LW + K PN+ T+N R
Sbjct: 176 DSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWEKLGEKNVVPNIRTYNAR 235
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L +R+ +A + M++ G++PD ++N +IKGF G+LD AKK + +
Sbjct: 236 LLGLAVAKRAGEAVEFYEEMEKKGVKPDLFSFNALIKGFANEGNLDEAKKWFGEIEKSEH 295
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
P+++ Y ++ +LC++GD A M K
Sbjct: 296 DPSKRTYAIIVPFLCEKGDLKTAIEMVK 323
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-LMQRF 285
LI+ + K N L++ M + C ++ + N + ++ ++ +L L +
Sbjct: 94 LITLYGKSNMHRHAQKLFDEMPQRNCERSVLSLNALLAAYLHSKQYDVVERLFKKLPVQL 153
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++PD V+YN IK G D A V M + + + T++ L +G F
Sbjct: 154 SVKPDLVSYNTYIKALLEKGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDG 213
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ + +KN VP++ T +A L GL
Sbjct: 214 EKLWEKLGEKNVVPNIRTYNARLLGL 239
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 188/344 (54%), Gaps = 2/344 (0%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A KLKAE DP+K +++ + + I + ++YA E V RLA + RF IE+ LE K+
Sbjct: 34 AKSKLKAEHDPDKALEIYSSVSDRYISPLSSRYAQEYIVKRLAKSHRFSDIENFLESHKN 93
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P+ +E F+ I+ YG A M HA+ ++ M G R+ S N L S+
Sbjct: 94 SPKITQEPFLSSIIRSYGVARMFDHALKIYHQMDDLGTPRSAISFNVLLSACMHSKLYDR 153
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ E+P K+ D S+ ++I+++CEMG+ + A EM++ GV+ + +TT++
Sbjct: 154 VAQLFDEIPVKYGFLPDKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTIL 213
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+FYK + + +WN MV +GC P++ +NV+I + + + L+ M G++
Sbjct: 214 HSFYKKGKSDEAERVWNEMVSRGCGPDVGAYNVKIMN-IQGSKPEGVKALIEEMSNAGLK 272
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD ++YN ++ +C++ +D A+KVY + PN ++T+I YLC++G F Y +
Sbjct: 273 PDTISYNYLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGRFETGYKV 332
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
++S+ + +P T+ L+EGL K ++ A + V+++ P
Sbjct: 333 FRESVSVHKIPDFITLKYLVEGLVKKSRWRDAKGMSRTVKKKFP 376
>gi|224134358|ref|XP_002327818.1| predicted protein [Populus trichocarpa]
gi|222836903|gb|EEE75296.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 202/357 (56%), Gaps = 5/357 (1%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A KL+ E DP+K ++ A ++N ++YA + TV RLA + RF IE L+E +K+
Sbjct: 25 AKSKLRTEHDPDKALAIYSAASNNDSSPAASRYAQDLTVRRLATSHRFTDIESLIESRKT 84
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P+ ++E F+ ++ YG AGM AM T++ M G R+ S NA L +SR
Sbjct: 85 DPKIKQEPFLSSLIRSYGVAGMFDQAMKTYHQMDQLGTPRSSISFNALLSACVQSRLYNK 144
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ E+ EK+ + D S+ I++K++CE G DKA V+ EM+K GV+ + YTTL+
Sbjct: 145 VPGLFDEISEKYRVLPDKVSYGILVKSYCEDGKPDKANEVLREMEKKGVEVTTVVYTTLL 204
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ Y + E W+ MV +GC + A +NV+I + + K+ + +L+ M+ ++
Sbjct: 205 NCLYSKGKNEEAERFWHAMVKRGCELDAAVYNVKISNAM-KQGPERVKELIEDMENSALK 263
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD ++YN +I +C +G ++ AKKVY + G N ++T++ +LC+ G++ Y +
Sbjct: 264 PDTISYNYLITSYCMTGMMEDAKKVYEGLEGYGCKANAATFRTLVFHLCKNGEYEKGYRL 323
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
K+S++ + +P +T+ L EGL + + +A ++ ++++ P N L+A+K +
Sbjct: 324 FKESVRVHRIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMKKKFP---PNLLNAWKKV 377
>gi|255554937|ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542351|gb|EEF43893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 397
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 198/358 (55%), Gaps = 7/358 (1%)
Query: 40 PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYI 99
PL K A+ LK+E +P+K+ ++ + + ++ AF +++L+ + F +I
Sbjct: 23 PLSSKERTRAAISLLKSEENPQKIIEICNSASLTPEAHLDRIAFSVAITKLSKSNNFSFI 82
Query: 100 EHLLEHQK-SLPQGR-REGFIMRIMMLYGKAGMIKHAMDTFYDMHL----YGCKRTVKSL 153
+ L+ + S P R E F ++L+G+A M+ HA+ TF + H G +VK
Sbjct: 83 QQFLDDLRVSRPDLRTSERFAAHAIVLFGQAAMVDHAVRTFKEYHTDVIGLGNNGSVKVF 142
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA L ++D ++ +E P+ ++I+ ++ S+N VIK+FC+ + V+ EM
Sbjct: 143 NALLFACYLAKDYSEVKRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSSSGFSVLAEMD 202
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRS 272
+ +KP+ T+ L++ FYK+ + E + +M K G P ++T+N+RIQ L ++S
Sbjct: 203 RKRLKPNATTFGHLLAGFYKEEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKKS 262
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A L+ M ++P+ VTY +I GFC G L+ K+++ M+ R P+ Y T+
Sbjct: 263 AEAKALLDGMLSRQMKPNSVTYAHLIHGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFTL 322
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+HYLC+ DF A +CK+S+ K+WVP++ T+ +L+ GL + +A ++A ++ +
Sbjct: 323 LHYLCKGQDFETALRICKESIGKDWVPNIATMKSLVNGLAGIGKVDEAKELIAKIKEK 380
>gi|21617993|gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 186/387 (48%), Gaps = 22/387 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
S NRRF AAAA P +P + + ERDP+
Sbjct: 15 FSTPTNRRFFSAVTAAAA----------------------TPSPPKPSLITLVNDERDPK 52
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+ + FK +N +E TV RLA A++F+++E +LE Q P +EGF+ RI
Sbjct: 53 FITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARI 112
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ LYG+ GM ++A F +M CKRTV S NA L S+ ++ E+P K
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVEGIFEELPGKLS 172
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ S+N +IK C G +A ++ E++ G+KPD IT+ L+ Y + E G
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+W MV K ++ ++N R+ L + +S + L ++ ++PD T+ +IKGF
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G LD A Y + P + ++ +++ +C+ GD AY +CK+ K +
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQ 388
+ +++ L K ++ +A I+ L +
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVELAK 379
>gi|18398767|ref|NP_565439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216725|sp|Q9ZU67.1|PP162_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g18520, mitochondrial; Flags: Precursor
gi|4218007|gb|AAD12215.1| expressed protein [Arabidopsis thaliana]
gi|21617890|gb|AAM66940.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
gi|330251683|gb|AEC06777.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 418
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 187/345 (54%), Gaps = 7/345 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A KL+ +DP+K ++K+ ++N + ++YA E TV RLA ++RF IE L+E K+
Sbjct: 36 AKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKN 95
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P+ + E F+ ++ YG+A M HAM F +M G RTV S NA L S +
Sbjct: 96 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFER 155
Query: 169 IQAFLMEVPEKF-HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E P+++ +I D S+ ++IK++C+ G +KA +M +M+ GV+ +I +TT+
Sbjct: 156 VPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTI 215
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ + YK+ + LW MV KGC + +NVR+ + K + +LM M G+
Sbjct: 216 LGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAA-KESPERVKELMEEMSSVGL 274
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD V+YN ++ +C G + AKKVY + PN ++T+I +LC G ++
Sbjct: 275 KPDTVSYNYLMTAYCVKGMMSEAKKVYEGL----EQPNAATFRTLIFHLCINGLYDQGLT 330
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ K S + +P T L EGL KNN+ A + +V+++ P
Sbjct: 331 VFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFP 375
>gi|297849542|ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338494|gb|EFH68911.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 403
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 188/338 (55%), Gaps = 1/338 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE-HQKSLPQG 112
LK+E +P ++ ++ ++ + ++ F V LA + F + LL+ ++ P
Sbjct: 49 LKSENNPNRILEICRSASLTPDYHVDRIIFSVAVVTLAKEKHFVAVSQLLDGFIQNQPDP 108
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+ E F +R ++LYG+A M+ ++ TF D+ Y RTVKSLNA L ++D K
Sbjct: 109 KSESFAVRAIILYGRANMLDRSIQTFRDLEQYEIPRTVKSLNALLFACLMAKDYKEANRV 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+E+P+ + I+ D+ ++N +I+ CE G +Y ++ EM++ VKP ++ +I FY
Sbjct: 169 YLEMPKMYGIEPDLETYNRMIRVLCESGSTSLSYSIVAEMERKWVKPTASSFGLMIDGFY 228
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + + + +M G +AT+N+ IQ L +++S +A L+ + + P+ V
Sbjct: 229 KEEKFDDVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSV 288
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+L+I GFC +LD A ++ M+ P+ + Y T+I LC+ GDF A I+C++S
Sbjct: 289 TYSLLIHGFCSEENLDEAMNLFEVMVYSGYKPDSECYFTLIRCLCKGGDFETALILCRES 348
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
M+KNWVPS + L+ GL ++ +A ++A V+ +
Sbjct: 349 MEKNWVPSFSIMKWLVNGLASVSKVDEAKELIAQVKEK 386
>gi|15221069|ref|NP_172629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200551|sp|Q9SAB4.1|PPR33_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11630, mitochondrial; Flags: Precursor
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity to gi|3367521 F8K4.8 from Arabidopsis thaliana
BAC gb|AC004392 [Arabidopsis thaliana]
gi|14326576|gb|AAK60332.1|AF385742_1 At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|19548051|gb|AAL87389.1| At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|21593339|gb|AAM65288.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|332190642|gb|AEE28763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 192/338 (56%), Gaps = 1/338 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE-HQKSLPQG 112
LK+E +P+++ ++ ++ + + ++ F V LA + F + LL+ ++ P
Sbjct: 49 LKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDP 108
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+ E F +R ++LYG+A M+ ++ TF ++ Y RTVKSLNA L ++D K
Sbjct: 109 KSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRV 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+E+P+ + I+ D+ ++N +I+ CE G +Y ++ EM++ +KP ++ +I FY
Sbjct: 169 YLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFY 228
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + + + +M G +AT+N+ IQ L +++S +A L+ + + P+ V
Sbjct: 229 KEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSV 288
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+L+I GFC +LD A ++ M+ P+ + Y T+IH LC+ GDF A I+C++S
Sbjct: 289 TYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRES 348
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
M+KNWVPS + L+ GL ++ +A ++A+V+ +
Sbjct: 349 MEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
>gi|18399887|ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product [Arabidopsis thaliana]
gi|22531265|gb|AAM97136.1| expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein [Arabidopsis thaliana]
gi|332641782|gb|AEE75303.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 394
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 185/387 (47%), Gaps = 22/387 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
S NRRF AAAA P +P + + ERDP+
Sbjct: 15 FSTHTNRRFFSAVTAAAA----------------------TPSPPKPSLITLVNDERDPK 52
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+ + FK +N +E TV RLA A++F+++E +LE Q P +EGF+ RI
Sbjct: 53 FITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARI 112
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ LYG+ GM ++A F +M CKRT S NA L S+ ++ E+P K
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ S+N +IK C G +A ++ E++ G+KPD IT+ L+ Y + E G
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+W MV K ++ ++N R+ L + +S + L ++ ++PD T+ +IKGF
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G LD A Y + P + ++ +++ +C+ GD AY +CK+ K +
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQ 388
+ +++ L K ++ +A I+ L +
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVELAK 379
>gi|224114227|ref|XP_002316702.1| predicted protein [Populus trichocarpa]
gi|222859767|gb|EEE97314.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 189/360 (52%), Gaps = 8/360 (2%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER+ E L + FK + + + +++++ RLA AR+F+Y+E +LE QK +EG
Sbjct: 36 ERNLEHLVEKFKNASVDEDFRTKTFVYKNSIHRLAAARKFNYVEEILEDQKQYEDIYKEG 95
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F R++ LYG AGM +A F +M C RTV S NA L S+ + +
Sbjct: 96 FNARLISLYGVAGMFDNARKVFDEMFERKCARTVVSFNALLGACVNSKKFDEAEGLFKGL 155
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ I+ D+ S+N V+KAFCEMG +D A ++ EM+K G++PD+IT+ TL+ FY R
Sbjct: 156 SKELEIEPDLVSYNTVLKAFCEMGSMDSAATLLDEMEKKGLEPDLITFNTLLHGFYAKGR 215
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
G +W M K P++ ++N ++ L ++R K++ M+ GI+ D +Y+
Sbjct: 216 FVDGERIWEQMKEKNVEPDIRSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYST 275
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I+GF G L AK Y + ++ + +I + Q+GDF AY +CKD +
Sbjct: 276 LIRGFVNEGDLKKAKHWYHEIGRSGCKRDKLTLEGLIPFALQKGDFMFAYGICKDVLCSK 335
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQR--------RVPHFSSNQLSAFKSILSK 408
+ I ++++ L K+++ +A ++ L + +P SN +++ S+ +
Sbjct: 336 LLVQNALIQSVVDALAKDSRLEEAKKLVGLGESCRAHSYKLELPKPPSNPMTSLVSVFHR 395
>gi|297847954|ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337700|gb|EFH68117.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 395
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 181/338 (53%), Gaps = 3/338 (0%)
Query: 42 VDKPLEPP--ALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDY 98
V + PP +L + ER+P+++ + FK + N ++ TV RL A+R +
Sbjct: 30 VSAAISPPQNSLTSIVNGERNPQRIVEKFKKACESERFRNNIAVYDRTVRRLVAAKRLHF 89
Query: 99 IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK 158
+E +LE QK +EGF RI+ LYGKAGM ++A F +M CKR+V S NA L
Sbjct: 90 VEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFDEMPDRNCKRSVLSFNALLS 149
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
S+ ++ E+P K I+ DI S+N +IKA CE L +A ++ E + G+K
Sbjct: 150 AYGLSKKFDVVEQLFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEFENKGLK 209
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PD++T+ TL+ + Y + E+G +W +V K ++ T+N R+ L ++ +S + L
Sbjct: 210 PDIVTFNTLLLSSYLKGQFELGEEIWAKLVEKNVPIDIRTYNARLLGLASEVKSKELVSL 269
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
++ GI+PD ++N +I+G G +D A+ Y ++ P++ + ++ +C+
Sbjct: 270 FEELKASGIKPDVFSFNAMIRGSINQGKMDEAESWYKEIVKHGYRPDKATFALLLPAMCK 329
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
GDF A + K++ K ++ T+ L++ L K ++
Sbjct: 330 AGDFEFAIELFKETFSKRYLVGQTTLQQLVDELVKGSK 367
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 177/330 (53%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ER+ +KL + FK + N +++T+ RL+ +R+FDY+E +LE QK +EG
Sbjct: 41 ERNHKKLVKKFKNASVNEHFRTKVAIYKETIRRLSVSRKFDYVEEILEDQKQYKDMSKEG 100
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F R++ LYG GM HA F +M C RTV S NA L S++ ++ +
Sbjct: 101 FNARLISLYGSVGMFDHARKVFDEMRERQCARTVMSFNALLGACLSSKNFDEVEGLFRGL 160
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ I+ D+ S+N VIKAFCEMG LD A ++ EM++ G++PD+IT+ TL+ FY R
Sbjct: 161 SKEIKIEPDLISYNTVIKAFCEMGSLDSAVSLLDEMKRKGLEPDLITFNTLLHGFYAKGR 220
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
G +W M K P++ ++N ++ L ++R K++ M+ GI+ D +Y+
Sbjct: 221 FVDGERIWEQMKEKNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSA 280
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I+GF G L AK Y + ++ + +I + Q+GDF AY +CKD +
Sbjct: 281 LIRGFVNEGDLKNAKHWYLEIGRSGCKRDKLTLEGLIPFALQKGDFMFAYGICKDVLCSK 340
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ I ++++ L K ++ A ++ L
Sbjct: 341 LLVQNALIQSVVDALAKESRMEAAKELVNL 370
>gi|297834132|ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
gi|297330788|gb|EFH61207.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 190/389 (48%), Gaps = 26/389 (6%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEP-PALVKL-KAERD 59
LS NRRF AAAA P P P+L+ L ERD
Sbjct: 15 LSTPTNRRFFSAVTAAAAT------------------------PSSPRPSLITLVNDERD 50
Query: 60 PEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM 119
P+ + + FK +N +E TV RLA A++F+++E +LE Q P +EGF+
Sbjct: 51 PKFIMEKFKKACQAEWFRKNIAVYEKTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVA 110
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
RI+ LYG+ GM ++A F +M CKRTV S NA L S+ +++ E+P K
Sbjct: 111 RIINLYGRVGMFENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVESIFKELPGK 170
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I+ D+ S+N +IK C G +A ++ E++ G+KPD IT+ L+ Y + E
Sbjct: 171 ISIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
G +W MV K ++ ++N R+ L +++S + L ++ ++PD T+ +IK
Sbjct: 231 GEKIWARMVEKKVKRDIRSYNARLLGLAMEKKSEEMVSLFDELKVNELKPDVFTFTAMIK 290
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GF G LD A Y + P + ++ +++ +C+ D AY +CK+ K +
Sbjct: 291 GFAGEGRLDEAITWYKEIEKNGCRPMKFVFNSLLPAICKACDLESAYELCKEIFVKRLLV 350
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQ 388
+ +++ L K ++ +A I+ L +
Sbjct: 351 DEAVLQEVVDTLVKGSKQDEAEEIVELAK 379
>gi|297836596|ref|XP_002886180.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332020|gb|EFH62439.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 421
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 185/345 (53%), Gaps = 7/345 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIEN-KYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A KL+ DP+K ++K+ ++N + +YA E TV RLA ++RF IE L+E K+
Sbjct: 32 AKSKLRKVHDPDKALAIYKSVSNNSSSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKN 91
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P+ + E F+ ++ YG+A M HAM F +M G RTV S NA L S +
Sbjct: 92 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDQIGTPRTVVSFNALLAACLHSDLFER 151
Query: 169 IQAFLMEVPEKF-HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E+P+++ +I D S+ ++IK++C+ G +KA +M +M+ GV+ +I +TT+
Sbjct: 152 VPQLFDEIPQRYNNITPDKVSYGMLIKSYCDSGSPEKAMEIMRDMEVKGVEVTIIAFTTI 211
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ + YK+ ++ LW MV KGC + +NVR+ + K + +LM M G+
Sbjct: 212 LGSLYKNGLVDVAESLWTEMVNKGCELDNTVYNVRLMNAA-KESPERVEELMEEMSSVGL 270
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD V+YN ++ +C G + AKKVY + PN ++T+I LC G ++
Sbjct: 271 KPDTVSYNYLMTAYCVKGMMGEAKKVYEGL----EQPNAATFRTLIFRLCINGLYDQGLT 326
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ K S + +P T L EGL KNN+ A + V+++ P
Sbjct: 327 VFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARTVKKKFP 371
>gi|224094727|ref|XP_002310210.1| predicted protein [Populus trichocarpa]
gi|222853113|gb|EEE90660.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 198/358 (55%), Gaps = 6/358 (1%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV--IENKYAFEDTVSRLAGARRFDYIEHLLEHQK 107
A +L+ E DP+K +F + + N + ++YA + TV RLA + RF IE L+E K
Sbjct: 23 AKSRLRTEHDPDKALAIFSSASSNDSSPPVVSRYAQDLTVRRLAKSHRFADIESLMESHK 82
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
S P+ ++E F+ ++ YG AGM A+ T+ +M G R+ S NA L +S+ K
Sbjct: 83 SDPKIKQEPFLSSLIRSYGVAGMFDQALKTYQEMDQLGTPRSCISFNALLSACIQSKLYK 142
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E+ EK+ + D S+ +++KA+CE G +KA V+ EM+K GV+ I T +
Sbjct: 143 KVPVLFNEISEKYRVLPDTVSYGMLVKAYCEDGKPEKAIEVLGEMEKKGVEVTAIVCTPV 202
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
++ Y + + + MV +GC + +NV+I + V+ + + +L+ M+ +G+
Sbjct: 203 LNCLYSKGKKDEAERFLDGMVERGCELDAVVYNVKISNAVS-QGPERVKELIEEMESYGL 261
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD ++YN ++ +C SG ++ AKKVY N ++T++ LC+ G++ Y
Sbjct: 262 KPDTISYNYLMTSYCTSGMMEEAKKVYEEFRVHGCKANAATFRTLVFNLCKSGEYEKGYE 321
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
+ KDS+K + +P +T+ L++GL + + +A ++ ++++ P N L+A+K +
Sbjct: 322 IFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKEAKGLIRTMKKKFPL---NLLNAWKKV 376
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 151/268 (56%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
+ RL A++F I+ +L++QK + E F++RIM+LYG +GM +HA F +M C
Sbjct: 94 IRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNC 153
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+RTVKS NA L S+ L E+PEK I D+ ++N +IKA C G +D
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+ E++K G +PD+I++ TL+ FY+ G+ +W+LM K PN+ ++N R++ L
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
++ A L+ +M+ GI PD TYN +I + +L+ K Y+ M + L P+
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
Y +I LC++GD + A + ++++K
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 11/234 (4%)
Query: 148 RTVKSLNAA-LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA---FCEMGILD 203
R V L +A ++ L E++ I L + +KF DI S + VI+ + G+ +
Sbjct: 84 RQVHGLYSAFIRRLREAKKFSTIDEVL-QYQKKFD---DIKSEDFVIRIMLLYGYSGMAE 139
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVR 262
A+ + EM +L + V ++ L+SA+ + + + + K G P+L T+N
Sbjct: 140 HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTM 199
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I+ L K + +++ G EPD +++N +++ F R +++ M + L
Sbjct: 200 IKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNL 259
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNN 375
PN + Y + + L + F A + D MK + P V T +AL+ + +N
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALITAYRVDN 312
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 150/268 (55%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
+ RL A++F I +L++QK + E F++RIM+LYG +GM +HA F +M C
Sbjct: 97 IRRLREAKKFSTIHEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNC 156
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+RTVKS NA L SR L + E+PEK I D+ ++N +IKA C G +D
Sbjct: 157 ERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGSMDDIL 216
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+ E++K G +PD+I++ TL+ FY+ G+ +W+LM K PN+ ++N R++ L
Sbjct: 217 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNSRVRGL 276
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
++ A L+ +M+ GI PD TYN I + +L+ K Y+ M + L P+
Sbjct: 277 TRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNLEEVMKWYNEMKEKGLTPDT 336
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
Y +I LC++GD + A + ++++K
Sbjct: 337 VTYCLLIPLLCKKGDLDRAVEISEEAIK 364
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 148 RTVKSLNAA-LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA---FCEMGILD 203
R V L +A ++ L E++ I L + +KF DI S + VI+ + G+ +
Sbjct: 87 RQVHGLYSAFIRRLREAKKFSTIHEVL-QYQKKFD---DIKSEDFVIRIMLLYGYSGMAE 142
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGLWNLMVCKGCFPNLATFNVR 262
A+ + EM +L + V ++ L+SA+ + E L G P+L T+N
Sbjct: 143 HAHKLFDEMPELNCERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTM 202
Query: 263 IQHLVNKRRSWQANKLMGL---MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
I+ L R+ + ++ + +++ G EPD +++N +++ F R +++ M
Sbjct: 203 IKALC---RTGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 259
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ L PN + Y + + L + F A + + P V T +A + + +N
Sbjct: 260 KNLAPNIRSYNSRVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDN 315
>gi|224076667|ref|XP_002304978.1| predicted protein [Populus trichocarpa]
gi|222847942|gb|EEE85489.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 1/311 (0%)
Query: 48 PPALVKLKAERDP-EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
PPA +R EK+ FK + + + TV RL R I +L+HQ
Sbjct: 23 PPAAATATKKRGTLEKMVSRFKKCSESSSFRSRYDIYAITVKRLIKYNRLSMINEILDHQ 82
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K+ P E F ++ LYGKAGM A F +M C RTV S NA L +R
Sbjct: 83 KNFPDMTNETFTAHLIYLYGKAGMFDDARKLFDEMPDLKCPRTVFSFNALLLACINARRF 142
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
I+ L + + I FD+ S++I I FC+MG L A +V EM K V+P++IT+ T
Sbjct: 143 DEIKKLLADFRSELGITFDVVSYSIAINGFCKMGDLVSAEMVFDEMIKSDVEPNLITFNT 202
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L++ FY + + G +W+ MV P++ ++N ++ L + R +A +++ M+ G
Sbjct: 203 LLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYNAKLHALALENRMKEAIEVVEEMRDKG 262
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+E D ++N +I+GF L+ AK+ Y M PNR +Q +I +LC++GD A
Sbjct: 263 LELDVFSFNALIRGFLNGEDLEEAKQWYGEMRRHGCEPNRVTFQFLIPFLCEKGDVGFAV 322
Query: 347 IMCKDSMKKNW 357
+C++ K W
Sbjct: 323 EICEEIFDKKW 333
>gi|225425092|ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIE-NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
+++E DPEKL +F + N ++ ++ + RL+ + R D +E L++HQK+LP
Sbjct: 34 VESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRSGRLDLVERLIDHQKTLPHP 93
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
R EGF +R++MLY +GM+ HA+ TF+ M + T KSL A L V ++ + +
Sbjct: 94 RTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSLCAILTVYLDNDLIDQLHTV 153
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+P + + S+++V+KAFC+ ++ A ++ +M+ PD+ +Y L+ A+
Sbjct: 154 FNTMPSEIGVSPGTKSYSLVLKAFCQQKDMESARKLLHKME----NPDIGSYNVLLEAYS 209
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++ + + + KG + T+N RI + S +A KL+ M G++P+
Sbjct: 210 ENGDGVEFDEILKEIKNKGLEHDCTTYNHRILRFCKNKESVRAKKLLDEMVAKGVKPNSA 269
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+YN++I GFC+ G + A+KV ML + P Y T+ ++ +EG+F+ A MCK+
Sbjct: 270 SYNMIIHGFCKVGDFESAQKVLGRMLADGYVAPCSISYITLFQHMVKEGEFDSALNMCKE 329
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
+++ WVP + + L++GL + ++ A ++ +++R+
Sbjct: 330 IIRRKWVPPFEAMDGLVKGLVEISKVEAAKEVVEKMKKRL 369
>gi|357131120|ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Brachypodium distachyon]
Length = 463
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 163/302 (53%), Gaps = 4/302 (1%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
ERDPEKL F A + +++ +E VSRLA R D IE +L QK + +E
Sbjct: 86 ERDPEKLVSDFVAASSASARFRDRHRVYEMAVSRLASLGRQDSIETILGAQKRFLETSKE 145
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
GF R++ LYG+A M A TF++ L + +LNA L ++++ A+ E
Sbjct: 146 GFATRLIGLYGRAAMPAQASATFHE--LPAQLKCTMTLNAVLTAYYQAKEFDALATAFQE 203
Query: 176 VPEKFHIQF-DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+ + ++S+NI+I+A C+ L A V+ M+K GV PD I++ TL++ FY++
Sbjct: 204 ISVSHPLVVPSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDNISFNTLLNGFYQN 263
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R + +W +M P+ ++N +++ LV + R A ++ M++ G +PD V+Y
Sbjct: 264 GRMDDAEAVWEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDTVSY 323
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N +I+G+C +G L+ AKK+Y ++ PNR Y+T++ L Q G+ + A C +
Sbjct: 324 NELIRGYCSAGRLEDAKKLYDGLVKNECAPNRGTYETLLPRLLQAGELDCAVRYCHGLLS 383
Query: 355 KN 356
N
Sbjct: 384 PN 385
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ ++N+ I+ L K A ++ LM++ G+ PD +++N ++ GF ++G +D A+ V
Sbjct: 213 PSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDNISFNTLLNGFYQNGRMDDAEAV 272
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ M G L P+ K Y + L EG A + + K+ P DT+S
Sbjct: 273 WEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEG--PKPDTVS 322
>gi|297741760|emb|CBI32989.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 159/272 (58%), Gaps = 5/272 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AGM+ A+ TF MH G RTV+SLNA L +++ K +E P+ + I+ ++
Sbjct: 132 RAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 191
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+N V+KAF E G Y ++ EM + GVKP+ ++ L++ FY + + E + +
Sbjct: 192 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKM 251
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSG 305
M P ++T+N+RIQ L ++S +A L+ G++ R ++P+ TY +I GFC+ G
Sbjct: 252 MEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILAR-RMKPNSETYCHLIHGFCKEG 310
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+LD AKK++ M+ R P+ Y T++++LCQ GDF A CK+ M+K W P++ T++
Sbjct: 311 NLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMT 370
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
+L+ GL ++ +A ++ ++ + FS N
Sbjct: 371 SLVNGLVSISKVEEARELIGQIKEK---FSRN 399
>gi|227463008|gb|ACP39956.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463010|gb|ACP39957.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 337
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 174/324 (53%), Gaps = 5/324 (1%)
Query: 13 TAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAH 72
T+A AA+ ++R S+ + PL AL LK+E++P+++ + +A +
Sbjct: 9 TSATAASF-----HLRRFSILSADSPTPLSAHQKTRAALCLLKSEQNPDRILNICRAASL 63
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
++ AF +S+L+ F I+ L S P + E F+ ++LYG+A M+
Sbjct: 64 TPTFHLDRIAFSVAISKLSEGNHFQSIDTFLRELNSRPDLQHERFVSHSLILYGQAKMLN 123
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
HA+ TF + + G R+ KSLNA L ++D K + +E P+++ I+ ++ ++N
Sbjct: 124 HALTTFDEFYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEPNLETYNTA 183
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
IKA CE G Y ++V+M+ G+KP+ T+ TL++ FY + + E + NLM G
Sbjct: 184 IKALCESGSSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVLNLMKEHGV 243
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
++T+N+RI+ L ++S +A L+ M GI P+ TYN +I G CR G+L AKK
Sbjct: 244 SVGVSTYNIRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNHLIYGXCRGGNLGEAKK 303
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYL 336
V+ M+ + P Y T+ ++L
Sbjct: 304 VFKNMVNKGFEPESHCYFTLWYFL 327
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
+ + A+ L+E ++I FL E+ + +Q + F + +I + + +L+ A E
Sbjct: 73 AFSVAISKLSEGNHFQSIDTFLRELNSRPDLQHERFVSHSLI-LYGQAKMLNHALTTFDE 131
Query: 212 MQKLGVKPDVITYTTL-ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN-- 268
G + L ++A + E G PNL T+N I+ L
Sbjct: 132 FYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEPNLETYNTAIKALCESG 191
Query: 269 ------------KRRSWQAN---------------------KLMGLMQRFGIEPDEVTYN 295
K + + N K++ LM+ G+ TYN
Sbjct: 192 SSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVLNLMKEHGVSVGVSTYN 251
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+ I+ C + AK + ML + +MPN Y +I+ C+ G+ A + K+ + K
Sbjct: 252 IRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNHLIYGXCRGGNLGEAKKVFKNMVNK 311
Query: 356 NWVP 359
+ P
Sbjct: 312 GFEP 315
>gi|357131125|ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 457
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 162/302 (53%), Gaps = 4/302 (1%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
ERDPEKL F A + +++ +E VSRLA R D IE LL QK + +E
Sbjct: 79 ERDPEKLVSDFVAASSASARFRDRHRVYEVAVSRLASFGRQDSIETLLGAQKRFLETSKE 138
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
GF R++ LYG+A M A TF++ L + + NA L + +++ A+ E
Sbjct: 139 GFATRLIGLYGRAAMPAQAAATFHE--LPAQLKCTMTFNAVLTAYSRAKEFDALATAFQE 196
Query: 176 VPEKFHIQF-DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+P + ++S+NI+I A C+ L A V+ M+K GV PD I++ TL++ F K+
Sbjct: 197 IPASHPLVVPSVYSYNILISALCQKPALSAALNVVTLMEKCGVLPDNISFNTLLNGFSKN 256
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R + +W +M + P+ ++N +++ LV + R A ++ M++ G +PD V+Y
Sbjct: 257 GRVDDAEAVWEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDTVSY 316
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N +I+G+C +G L+ AKK+Y ++ PN+ Y+T++ L Q G+ + A C +
Sbjct: 317 NELIRGYCSAGRLEDAKKLYDGLVKNECAPNKGTYETLLPRLLQAGELDCALRYCHELFS 376
Query: 355 KN 356
N
Sbjct: 377 SN 378
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ ++N+ I L K A ++ LM++ G+ PD +++N ++ GF ++G +D A+ V
Sbjct: 206 PSVYSYNILISALCQKPALSAALNVVTLMEKCGVLPDNISFNTLLNGFSKNGRVDDAEAV 265
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ M R L P+ K Y + L EG A + + K+ P DT+S
Sbjct: 266 WEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEG--PKPDTVS 315
>gi|413952228|gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
Length = 453
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 156/297 (52%), Gaps = 4/297 (1%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFED-TVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
ERDP+KL F A + NK+ D V+RLA R D I +++ QK
Sbjct: 63 ERDPDKLVSQFIAESTASERFRNKHRVYDVAVARLASFGRHDGIAAIIDSQKPFIAASSV 122
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
GF R++ L G+A M HA F+D L ++ + NA L ++ D A+ L E
Sbjct: 123 GFAARLIRLCGRASMPSHAAAIFHD--LPPKHKSSMTFNALLAAYLDASDFDALATALQE 180
Query: 176 VPEKF-HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+P I I+S NI+I A C+ L A V+ M+K G+ PD+I++ L++ FY +
Sbjct: 181 IPATHPTIAPTIYSHNILISALCKKPDLSAAVDVITLMEKRGITPDIISFNILLNGFYSN 240
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+R + +W +M + P+ ++N +++ LV++ R A L+ MQ+ G +PD V+Y
Sbjct: 241 DRFDDVEKVWEMMKERNVEPDARSYNAKLRGLVSQGRVEDAAALIERMQKEGPKPDSVSY 300
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
N +I+G+C G L+ AKKVY M+ PNR + T++ + + G+ + A C +
Sbjct: 301 NELIRGYCNEGRLNEAKKVYDNMIKNGYAPNRGTFHTLVPHFVEAGELDHALSCCHE 357
>gi|297735184|emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 172/340 (50%), Gaps = 46/340 (13%)
Query: 54 LKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
L++E DP++ +++ + + H + ++YA + TV RLA +RRF IE L+E K+ P+
Sbjct: 44 LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 103
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+E ++ ++ Y + F
Sbjct: 104 TQEPYLSTLIRSY-------------------------------------------VPKF 120
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
E+P ++ + D S+ I++K++CE G+ DKA ++ EM++ GV+ +T+TT++ A Y
Sbjct: 121 FEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALY 180
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K + + +W+ M KGC ++ +NV+I + L+ M G++PD +
Sbjct: 181 KQGQSDRAEKVWHEMAKKGCL-DVGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDTI 238
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+YN ++ +C+SG +D AKKVY+ + PN ++T+I+YLC+ GDF Y + K S
Sbjct: 239 SYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQS 298
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ +P T+ L+EGL + + +A ++ V++ P
Sbjct: 299 AFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFP 338
>gi|224113615|ref|XP_002316521.1| predicted protein [Populus trichocarpa]
gi|222859586|gb|EEE97133.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 189/366 (51%), Gaps = 11/366 (3%)
Query: 40 PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYI 99
PL K AL LK+E +PEK+ ++ ++ ++ F + +LA + F YI
Sbjct: 26 PLSSKSKTCAALSLLKSETNPEKILEICRSACLTPYAHIDRITFSVAIDKLAKSNNFSYI 85
Query: 100 EHLL-EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH------LYGCKRTVKS 152
+ L + + S P R F ++LYG+AGMI A+ F + H + +VK
Sbjct: 86 DDFLTDLRTSRPDLRTVRFAAHSIILYGQAGMIDQAIRLFKEYHEKNQNDVVLTSGSVKL 145
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
LNA L ++ + ++ +++ I+ ++ +FN VI++FCE G Y V+ EM
Sbjct: 146 LNALLFSCILAKKYDEVNRVFVDFSKRYKIEPNLETFNTVIQSFCESGSSSSCYSVLNEM 205
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPE-IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
GVKP+ T+ L + FY++ + E +G + G + +N+RI L +R
Sbjct: 206 DMKGVKPNETTFGHLFAGFYREEKYEDVGTVSKMIEEDYGISAGIGVYNIRIHSLCKLKR 265
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ +AN L+ GI P+ VTY+ +I GFC G L+ AK+++ +M R P Y T
Sbjct: 266 AREANVLLEGCLSKGITPNGVTYSHLILGFCMEGDLEEAKRLFKSMENRGCQPAYSCYAT 325
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
++++L + GDF AY +CK+SM K VP+ T+ L++GL + + KA ++ V+ R
Sbjct: 326 LVYFLGKGGDFESAYRVCKESMGKKMVPNFSTMKILVQGLASSGEVDKAKELIGEVKER- 384
Query: 392 PHFSSN 397
FS N
Sbjct: 385 --FSKN 388
>gi|156070774|gb|ABU45188.1| unknown [Capsicum frutescens]
Length = 373
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 178/348 (51%), Gaps = 20/348 (5%)
Query: 46 LEPPALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLE 104
L A+ KLKAE DP+K Q++ + + I + ++YA E TV RLA + RF E+ LE
Sbjct: 13 LTTAAMPKLKAEHDPDKALQIYSSVSDRYISPLSSRYAQEYTVKRLAKSHRFSDSENFLE 72
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
K+ + +E F+ I+ YG AGM HA+ + M G R+ S N L S+
Sbjct: 73 SHKNSSKITQEPFLSSIIRSYGVAGMFDHALKICHQMDHLGTPRSAISFNVLLSACVHSK 132
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+ E+P + D + +IK C MG + EM + V+ + +
Sbjct: 133 LYDRVAQLFDEMP----VSMDFY----LIK--CPMG--------LKEMDEKDVEITTVAF 174
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TT++ +FYK + + +WN MV KGC P++ +NV+I + + L+ M
Sbjct: 175 TTILHSFYKKGKSDEAERVWNEMVNKGCGPDVGAYNVKIMN-IQGGDPEGVKALIEEMSD 233
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G++PD ++YN ++ + R+ ++ +KVY + PN ++T+I YL ++G +
Sbjct: 234 AGLKPDTISYNYLMTCYFRNELMNEVQKVYEDLEANGCNPNAATFRTLIFYLSKKGKYEA 293
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
Y + K+S++ N +P +T+ L+EGL K ++ +A + V+++ P
Sbjct: 294 GYKVFKESVRVNKIPDFNTLEYLVEGLVKRSKLNEAKRMSKTVKKKFP 341
>gi|125528002|gb|EAY76116.1| hypothetical protein OsI_04043 [Oryza sativa Indica Group]
Length = 390
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 148/272 (54%), Gaps = 8/272 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKF 180
+ L+G+AG++ A+ TF + +SLNA L L +A + F P+ +
Sbjct: 111 IALFGQAGLLPDAVSTFKS------SPSTRSLNALLFACLVSGNHAEAARVF-QTFPDAY 163
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ + +FN +IK+F E G Y V+ EM K GVKP+ T+TT I+ FYK+ R +
Sbjct: 164 SVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCKKGVKPNATTFTTAIAGFYKEERFDDV 223
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ LM GC +L FNVR+Q L RS A L+ M + G +P +TYN +I G
Sbjct: 224 GKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHG 283
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC+ G L+ AK++Y M + L+ + Y +I+YLC+ GDF+ A + + +NWVP
Sbjct: 284 FCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPC 343
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 344 FSTMKMLVNGLAGSSRVDEAKGIIEKMKEKFP 375
>gi|20146263|dbj|BAB89045.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|20160842|dbj|BAB89782.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|215700983|dbj|BAG92407.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 390
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 148/272 (54%), Gaps = 8/272 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKF 180
+ L+G+AG++ A+ TF + +SLNA L L +A + F P+ +
Sbjct: 111 IALFGQAGLLPDAVSTFKS------SPSTRSLNALLFACLVSGNHAEAARVF-QTFPDAY 163
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ + +FN +IK+F E G Y V+ EM + GVKP+ T+TT I+ FYK+ R +
Sbjct: 164 SVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDV 223
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ LM GC +L FNVR+Q L RS A L+ M + G +P +TYN +I G
Sbjct: 224 GKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHG 283
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC+ G L+ AK++Y M + L+ + Y +I+YLC+ GDF+ A + + +NWVP
Sbjct: 284 FCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPC 343
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 344 FSTMKMLVNGLAGSSRVDEAKGIIEKMKEKFP 375
>gi|242054629|ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
gi|241928435|gb|EES01580.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
Length = 439
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 155/296 (52%), Gaps = 16/296 (5%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
ERDP+K A +R+ +E V+RLA R D I +++ QK + G
Sbjct: 63 ERDPDK------AGVPHRV-------YEVAVARLASFGRHDAIAAIIDSQKPFIEASSVG 109
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F R++ L G A M HA F+ L ++V + NA L ++ D A+ ++
Sbjct: 110 FAARLVRLCGGASMPSHAAAIFHG--LPPKHKSVMTFNALLAAYVDASDFDALTTTFQQI 167
Query: 177 PEKF-HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
P I ++S+NI+I A C+ L A V+ M+K GV PD+I++ L++ FY ++
Sbjct: 168 PASHPTIIPTVYSYNILISALCQKPELSAALDVIALMEKRGVSPDIISFNILLNGFYNND 227
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ +W +M + P+ ++N +++ LV++ R A L+ MQ+ G +PD V+YN
Sbjct: 228 SFDDAEKVWEMMKERNIEPDEKSYNAKLRGLVSQGRVEDAVALIERMQKEGPKPDSVSYN 287
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+I+G+C+ G L+ AKKVY ++ PNR + T++ +L + G+ + A C +
Sbjct: 288 ELIRGYCKEGRLNEAKKVYDDLIKNECAPNRGTFHTLVPHLVEAGELDRALSCCHE 343
>gi|115440379|ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein 1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS [Oryza sativa Indica Group]
gi|113534000|dbj|BAF06383.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 164/303 (54%), Gaps = 6/303 (1%)
Query: 57 ERDPEKLFQLFKA--NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
ERDP+KL F A + H R ++ ++ VSRLA R D +E +++ QK + +
Sbjct: 70 ERDPDKLVSGFIAASSTHPRFRARHR-VYDVAVSRLATFGRLDGVEAIIDAQKPFLETSK 128
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
EGF R++ LYG A M HA TF+D L ++ + N+ L E+ + +A+ A
Sbjct: 129 EGFAARLIRLYGHASMASHAAATFHD--LPPQLKSTMTFNSLLAAYVEAGEFEALAAAFK 186
Query: 175 EVP-EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E+P + ++S+NI+++A C++ L A M M+K G+ PD++T+ TL++ FY
Sbjct: 187 EIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTMTLMEKSGISPDLVTFNTLLNGFYN 246
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ +W ++ + P+ +N +++ LV + R A ++ M++ G +PD ++
Sbjct: 247 HGDMDGAEKVWEMITERNMVPDAKNYNAKLRGLVAQGRIEDAVAVVEKMEKDGPKPDTIS 306
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
YN +I+G+C+ G L+ AKK++ M + NR Y T+I L + G+ + A C +
Sbjct: 307 YNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYALKCCHEIY 366
Query: 354 KKN 356
KN
Sbjct: 367 GKN 369
>gi|449438040|ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 191/377 (50%), Gaps = 12/377 (3%)
Query: 24 LNNIRAVSLNKFPNREPLVDKPLEPPALVKLKA----ERDPEKLFQLFKANAHNRIVIEN 79
++ + + S + P +P D P P+L K+ + DP+KL Q F +
Sbjct: 15 ISRLHSFSYSTTPPLQPTSDSPF--PSLRAAKSAILSQSDPDKLAQSFIQASTLPSFCRY 72
Query: 80 KYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
+ + ++ +LA A+RFD I+ +++ P EGF +R++MLY GM+ A+
Sbjct: 73 RPIYHQSIRKLARAQRFDLIDVIIQSHHKSPSATSEGFWIRLIMLYSSVGMVNQALYILD 132
Query: 140 DMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
L+ C + KSL A L V ++ + + +PEK + S N+V+KAF
Sbjct: 133 QAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVR 192
Query: 199 MGILDKAYLVMVEMQKLGVK--PDVITYTTLISAFYKDNRPEIG-NGLWNLMVCKGCFPN 255
L A + E+ K K P++ ++T L+ A++ N IG + + + +G N
Sbjct: 193 QNDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYW-SNGDMIGFDEIEKEISKRGLEFN 251
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
LAT+N RI L + +A K++ M G++P+ +Y+ +I G+C G ++ A K+
Sbjct: 252 LATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILK 311
Query: 316 AML-GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+L + P +IY +I + +EG+F +A C++++K+ WVP + + AL+ GL
Sbjct: 312 GILEDGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPFEAMEALVRGLVAM 371
Query: 375 NQPCKANTIMALVQRRV 391
++ +A ++ +++R+
Sbjct: 372 SKVEEAKEVVEKMKKRL 388
>gi|357150324|ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 468
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 173/358 (48%), Gaps = 7/358 (1%)
Query: 50 ALVKLKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A +L+ E D ++ L A + + ++A RL+ A RF E LL
Sbjct: 41 AKTRLRREYDADRAVSLLDAIDTASLSAASTRHALSLAARRLSRAGRFADAEALLSSH-- 98
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLK 167
+P E + I+ Y A + + A++ F + NA L R +
Sbjct: 99 IPASPTEPHLSAILCSYASAALPEKALEAFRSAAPSLPSPISPMPFNALLSAFVRCRRHR 158
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E+ ++F I D S+ I++KA C + KA+ V+ +M++ G+ P +TT+
Sbjct: 159 RVPVLFTELSKEFSITPDATSYGILVKAHCMVRHDAKAHEVLAQMREEGISPTTTIFTTM 218
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I + YK + E LW M+ GC P+ AT+NV+ + + +M M+ G+
Sbjct: 219 IDSMYKQKKIEEAETLWKQMLESGCKPDQATYNVKAMNFGLHGKPEDVLLVMAEMEAAGV 278
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD +TYN ++ +C++G ++ AK +Y ++ + PN Y+ M+ YL GDF+ A
Sbjct: 279 KPDTITYNFLMTSYCKNGKVEDAKGLYHSLGAKGCSPNAATYKHMMAYLFAHGDFDAAMK 338
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
+ ++S+ K+ VP T+ +EGL K + +A +++ V++ P N LS +K +
Sbjct: 339 IFRESLSKHKVPDFKTMKGFVEGLAKGGKVAEAKDVISEVKKMFPE---NLLSGWKKL 393
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 23/363 (6%)
Query: 53 KLKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+L+ ERDP+++ + A + + ++A RL+ +RRF E LL L
Sbjct: 45 QLRRERDPDRVVSILDAIDTASISAASTRHALSLAARRLSLSRRFAEAEALLSSH--LTA 102
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL---------NAALKVLTE 162
E + ++ Y A + + A+D F + SL NA L
Sbjct: 103 SNTETHLAAVLCCYAAANLPEKAIDAF--------RSAAPSLPAPISPLPFNALLSTFVR 154
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
R + + E+ ++F I D S+ I++KA+C KA V+ M++ G+ P
Sbjct: 155 CRRYRRVPVLFAELSKEFSITPDATSYAILVKAYCMNRDDAKAKQVLDLMREQGISPTAS 214
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
YT+LI + YK LW MV GC P++ T+NV+ + + + + ++M M
Sbjct: 215 IYTSLIDSMYKRKMTNEAESLWKEMVESGCEPDVVTYNVKALYYMAHGKPEEVIEVMTEM 274
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G++P+ +TYN ++ +C+SG L+ AK +Y ++ + + Y+ M+ LC GDF
Sbjct: 275 EAAGLKPNTITYNYLMISYCKSGKLEDAKVLYHSLAEKGCSADAYTYKHMLAELCAHGDF 334
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
+ + KDS+KK VP T+ L+EGL K + A ++A V+ P N LS +
Sbjct: 335 DAGLGIFKDSLKKRKVPDFRTMKRLVEGLAKGGRVADAKEVIAEVKNMFPE---NLLSGW 391
Query: 403 KSI 405
K +
Sbjct: 392 KKV 394
>gi|125572292|gb|EAZ13807.1| hypothetical protein OsJ_03733 [Oryza sativa Japonica Group]
Length = 351
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 144/267 (53%), Gaps = 8/267 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKFHIQFD 185
+AG++ A+ TF + +SLNA L L +A + F P+ + ++ +
Sbjct: 77 RAGLLPDAVSTFKS------SPSTRSLNALLFACLVSGNHAEAARVF-QTFPDAYSVKPN 129
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+FN +IK+F E G Y V+ EM + GVKP+ T+TT I+ FYK+ R + +
Sbjct: 130 TDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGKVIE 189
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
LM GC +L FNVR+Q L RS A L+ M + G +P +TYN +I GFC+ G
Sbjct: 190 LMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEG 249
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ AK++Y M + L+ + Y +I+YLC+ GDF+ A + + +NWVP T+
Sbjct: 250 DLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMK 309
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVP 392
L+ GL +++ +A I+ ++ + P
Sbjct: 310 MLVNGLAGSSRVDEAKGIIEKMKEKFP 336
>gi|242054627|ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
gi|241928434|gb|EES01579.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
Length = 429
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 154/299 (51%), Gaps = 21/299 (7%)
Query: 54 LKAERDPEKLF-QLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
+ ERDP+KL Q A+ + +N+ +E VSRLA R D + LL+ QK +
Sbjct: 68 ISEERDPDKLVSQFIAASTASPRFRDNRRVYEVAVSRLASFGRRDAVAALLDSQKPFLEA 127
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
E F +RI+ LYG+A M HA TF + L ++V + NA L ++ D ++
Sbjct: 128 SNEDFTVRILRLYGRASMPSHAAATF--VGLPPKHKSVAAFNALLAAYVDTGDFDSLAIA 185
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E+P + LD V+ M K G+ PD++++ +L++ FY
Sbjct: 186 LDEIPGSQKAE--------------PSAALD----VISLMDKCGLTPDMVSFNSLLNGFY 227
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ R + +W +M + PN T+N +++ LV + R A ++ M + G +PD V
Sbjct: 228 NNGRFDKAEKIWEMMKERNLQPNAKTYNAKLRGLVAEGRMEDAAAVIQRMLKEGPKPDSV 287
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+YN +I+G+C+ G LD +KKVY ++ PN+ ++T+I L + G+ +LA C++
Sbjct: 288 SYNELIRGYCKEGRLDESKKVYDELVKNGYAPNKGTFETLIPCLVEVGELDLALNCCQE 346
>gi|242041671|ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
gi|241922084|gb|EER95228.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
Length = 396
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 174/347 (50%), Gaps = 12/347 (3%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
ER+P+KL F A + N++ +E V+RLA R D I +++ QK +
Sbjct: 10 ERNPDKLVSRFIAKSTASESFRNEHRVYEVAVARLASFGRHDAIAAIIDSQKPFIKASSV 69
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ-AFLM 174
GF R++ L G+A M HA F+D L +++ + NA L ++ D A+ AF
Sbjct: 70 GFAARLIRLCGRASMPSHAAAIFHD--LPPKHKSIMTFNALLATYVDASDFDALAIAFQQ 127
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+ I ++S++I+I A C+ L A V+ M+K GV PD I + +++ FY++
Sbjct: 128 ILASHPTIVPTVYSYSILISALCQKRELSAALDVITLMEKRGVSPDNIFFNIVLNGFYRN 187
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ + +W +M + P+ +N +++ L+++ R A L+ MQ+ G +PD V+Y
Sbjct: 188 DSFDDAEKVWEIMKERNIEPDAKCYNAKLRGLISQGRVEDAVALIERMQKEGPKPDSVSY 247
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N +I+G+C+ G L+ AKKVY ++ PNR + T++ + + + + A C + +
Sbjct: 248 NELIRGYCKEGRLNQAKKVYDDLIKNECAPNRGTFHTLVPHFVEARELDCALSCCHEIFR 307
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR--------RVPH 393
+ + ++ L ++ +A I+ L + R+PH
Sbjct: 308 RKCRVQCSLLQGVVTALIAASRMEEARRIVQLGRTSYYPRKGLRIPH 354
>gi|357125390|ref|XP_003564377.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Brachypodium
distachyon]
Length = 390
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKF 180
+ L+G+AG++ A+ TF + +SLNA L L +A + F P+
Sbjct: 111 IALFGQAGLLPDAISTFQS------SPSTRSLNALLFACLVAGNHAEAARIF-QTFPDAH 163
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+++ + +FN +IK+F E G Y V EM K GVKP+ T+TT I+ FYK+ +
Sbjct: 164 NVKPNTETFNAIIKSFSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAGFYKEEQFGDV 223
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ LM GC +L +N R+Q L RS +A L+ M + G +P VTYN +I G
Sbjct: 224 EKVIELMKKHGCGESLQVYNARVQGLCKLGRSGEAKALLNEMVKRGTKPSWVTYNHLIYG 283
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC+ G L+ K++Y M + L+ + Y T+I YLC+ GDF+ A + ++ ++WVP
Sbjct: 284 FCKEGDLEEVKRLYKEMGKKGLVGDSSFYFTLIFYLCKAGDFDSALGVYNETTARSWVPC 343
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 344 FSTMKMLVNGLAGSSKVDEAKGIIEKMKEKFP 375
>gi|242054647|ref|XP_002456469.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
gi|241928444|gb|EES01589.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
Length = 392
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
++L+G+A ++ A+ TF + +SLNA + S + P+
Sbjct: 113 IVLFGQANLLPDAISTFQS------SPSTRSLNALIFACIVSGNHTEAARVFQTFPDAHG 166
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G + Y V EM K G+KP+ T+TT ++ FYK+ R +
Sbjct: 167 VKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNATTFTTALAGFYKEERFDDVG 226
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +NVR+Q L RS +A L+ M + G +P VTYN +I GF
Sbjct: 227 KVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMVKKGTKPSWVTYNHLIYGF 286
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y +IHYLC+ DF+ A + + KNWVP
Sbjct: 287 CKEGDLEEAKRLYKEMGRKGLVGDINFYFMLIHYLCKGDDFDTALGVYNEIAAKNWVPCF 346
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 347 STMKMLVNGLAGSSRIDEAKGIIEKMKEKFP 377
>gi|195620494|gb|ACG32077.1| membrane-associated salt-inducible protein [Zea mays]
Length = 393
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ L+G+A ++ A+ TF + +SLNA + S + P+
Sbjct: 114 IALFGQAHLLPDAISTFQS------SPSTRSLNALIFACIVSGNHTEXARVFQTFPDAHG 167
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G + Y V EM K G+KP+ IT+TT ++ FYK+ + +
Sbjct: 168 VKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIK 227
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +NVR+Q L RS +A L+ M + G +P+ VTYN +I GF
Sbjct: 228 KVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGF 287
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y +I+YLC+ D + A + + KNWVP
Sbjct: 288 CKEGDLEEAKRLYKEMGRKGLVGDSDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCF 347
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 348 STMKMLVNGLAGSSRIDEAKGIIEKMKEKFP 378
>gi|226490900|ref|NP_001141371.1| uncharacterized protein LOC100273462 [Zea mays]
gi|194704218|gb|ACF86193.1| unknown [Zea mays]
gi|414880165|tpg|DAA57296.1| TPA: hypothetical protein ZEAMMB73_527047 [Zea mays]
Length = 393
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ L+G+A ++ A+ TF + +SLNA + S + P+
Sbjct: 114 IALFGQAHLLPDAISTFQS------SPSTRSLNALIFACIVSGNHTEAARVFQTFPDAHG 167
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G + Y V EM K G+KP+ IT+TT ++ FYK+ + +
Sbjct: 168 VKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIK 227
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +NVR+Q L RS +A L+ M + G +P+ VTYN +I GF
Sbjct: 228 KVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGF 287
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y +I+YLC+ D + A + + KNWVP
Sbjct: 288 CKEGDLEEAKRLYKEMGRKGLVGDSDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCF 347
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 348 STMKMLVNGLAGSSRIDEAKGIIEKMKEKFP 378
>gi|115440435|ref|NP_001044497.1| Os01g0793200 [Oryza sativa Japonica Group]
gi|113534028|dbj|BAF06411.1| Os01g0793200, partial [Oryza sativa Japonica Group]
Length = 235
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 123/216 (56%)
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P+ + ++ + +FN +IK+F E G Y V+ EM + GVKP+ T+TT I+ FYK+ R
Sbjct: 5 PDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEER 64
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ + LM GC +L FNVR+Q L RS A L+ M + G +P +TYN
Sbjct: 65 FDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNH 124
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I GFC+ G L+ AK++Y M + L+ + Y +I+YLC+ GDF+ A + + +N
Sbjct: 125 LIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARN 184
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
WVP T+ L+ GL +++ +A I+ ++ + P
Sbjct: 185 WVPCFSTMKMLVNGLAGSSRVDEAKGIIEKMKEKFP 220
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 185/379 (48%), Gaps = 16/379 (4%)
Query: 18 AADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKA-NAHNRIV 76
AADA+ +RA L +PL A +L+ E DP+++ LF+A + +
Sbjct: 18 AADAL----LRA--LTTAAGEQPLTASA----AKTRLRREHDPDRVVSLFEAIDDASLSA 67
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
++A RL+ +RRF E LL +P E + ++ Y A + + A+
Sbjct: 68 SSTRHALSLAARRLSRSRRFADAEALLSSH--IPASPTEPQLAAVLCSYAAASLPEKALA 125
Query: 137 TFYDMHLYGCKRTVKSL--NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
F + L NA L V R + + E+ ++F I D S+ I++K
Sbjct: 126 AFRSA-APSLPSPISPLPFNAVLSVFLRCRRHRRVPVLFDELSKEFSITPDASSYGILVK 184
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A+C + KA+ V+ +M+ G P YTT+I + YK + E LW M+ G P
Sbjct: 185 AYCMLSKDAKAHEVLDQMRGQGFTPTNSIYTTMIDSMYKQKKMEQAERLWKQMLESGRKP 244
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+ A +N +I H ++ +++ M+ G++PD +TYN ++ +C+ G ++ AK++Y
Sbjct: 245 DQAVYNTKIMHHSLHGKTEDVLEVIAEMEEAGVKPDTITYNFLMTSYCKHGKMETAKELY 304
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
++ + N Y+ M+ LC GD + A ++ K+S + N VP T+S L+EGL K
Sbjct: 305 RSLGEKGCSANAATYKHMMAQLCAHGDLDGALVIFKESYRSNKVPDFRTMSGLVEGLTKA 364
Query: 375 NQPCKANTIMALVQRRVPH 393
+ +A I+A ++++ P
Sbjct: 365 GRVAEAKNIVAKMKKKFPE 383
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 165/330 (50%), Gaps = 5/330 (1%)
Query: 44 KPLEP-PALVKLKAERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEH 101
KP E P L LK DPE+ LF + + + + Y ++ + +LA +R FD ++
Sbjct: 45 KPWEEVPFLTDLKEIEDPEEALSLF--HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQ 102
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+L + RE M ++ YGKAG + A+D F+ + + C RT++SLN + VL
Sbjct: 103 ILRLVRYRNVRCRESLFMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLV 162
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++ +L+ ++F + + ++ + SFNI+IK F + + A V EM ++ V+P V
Sbjct: 163 DNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY +LI ++N L M+ K PN TF + ++ L +A KLM
Sbjct: 222 VTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFD 281
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+ G +P V Y +++ + G +D AK + M RR+ P+ IY ++++LC EG
Sbjct: 282 MEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGR 341
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
AY + K P+ T +++G
Sbjct: 342 VPEAYRTLTEMQMKGCKPNAATYRMIVDGF 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 1/197 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V + N+ + L + D+ + L ++ +K I+ + +F +++K C G ++A +
Sbjct: 220 SVVTYNSLIGFLCRNNDMGKATSLLEDMIKK-RIRPNAVTFGLLMKGLCCNGEYNEAKKL 278
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
M +M+ G KP ++ Y L+S K + + L M + P+ +N+ + HL
Sbjct: 279 MFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCT 338
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ R +A + + MQ G +P+ TY +++ GFCR G D V +AML R P
Sbjct: 339 EGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPAT 398
Query: 329 YQTMIHYLCQEGDFNLA 345
+ M+ L + G+ + A
Sbjct: 399 FVRMVSGLIKGGNLDHA 415
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C + + N I LV+ +A + + P+ V++N++IKGF + A
Sbjct: 147 CVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAAC 206
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
KV+ ML + P+ Y ++I +LC+ D A + +D +KK P+ T L++GL
Sbjct: 207 KVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGL 266
Query: 372 KKNNQPCKANTIMALVQRR 390
N + +A +M ++ R
Sbjct: 267 CCNGEYNEAKKLMFDMEYR 285
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 4/354 (1%)
Query: 46 LEPPALVKLKAERDPEKL-FQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P + KL A + L ++F+ + + + + +L AR+F +E L++
Sbjct: 98 LTPARVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQ 157
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
+ G + I+ +YG+ GM A+ F+ M +G + K N L VL E +
Sbjct: 158 QMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHK 217
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
L+ + ++ E F I + ++NI+I+A C L AY + +M K G PDV TY
Sbjct: 218 CLETALSLFKKLHE-FGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETY 276
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ L+ + ++ + G+ + M+ KG P+ T+N + L K +A +L+ M+
Sbjct: 277 SILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKV 336
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G PD + YN VI GFCR G A ++ M +PN Y+T+++ LC EG F+
Sbjct: 337 MGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDE 396
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV--PHFSS 396
A ++ + ++P + L+ GL + +A ++ ++ ++ PH S+
Sbjct: 397 AKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHEST 450
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 63/124 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N VI FC G A ++ +M + G P+ ++Y TL++ + + +
Sbjct: 342 DVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFV 401
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P+++ +++ I L N+ + +A +++ +M + + P E T+++++ C
Sbjct: 402 EEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICED 461
Query: 305 GHLD 308
+
Sbjct: 462 SQTE 465
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 166/330 (50%), Gaps = 5/330 (1%)
Query: 44 KPLEP-PALVKLKAERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEH 101
KP E P L LK DPE+ LF + + + + Y ++ + +LA +R FD ++
Sbjct: 45 KPWEEVPFLTDLKEIEDPEEALSLF--HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQ 102
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+L + RE M ++ YGKAG + A+D F+ + + C RT++SLN + VL
Sbjct: 103 ILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLV 162
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++ +L+ ++F + + ++ + SFNI+IK F + + A V EM ++ V+P V
Sbjct: 163 DNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY +LI +++ L M+ K PN TF + ++ L K +A KLM
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+ G +P V Y +++ + G +D AK + M RR+ P+ IY ++++LC E
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
AY + + K P+ T +++G
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F +M + +V + N+ + L + D+ ++ L ++ +K I+ + +F +++
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK-RIRPNAVTFGLLM 263
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
K C G ++A +M +M+ G KP ++ Y L+S K R + L M +
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ +N+ + HL + R +A +++ MQ G +P+ TY ++I GFCR D V
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+AML R P + M+ L + G+ + A + + KKN
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 115/259 (44%), Gaps = 1/259 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A+ F+ G + S ++ + L +SR+ A+ L V + +++ F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMG 121
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+ + + G +DKA V ++ + + TLI+ + E ++
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN +FN+ I+ ++K A K+ M ++P VTYN +I CR+ + AK
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M+ +R+ PN + ++ LC +G++N A + D + P + L+ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 372 KKNNQPCKANTIMALVQRR 390
K + +A ++ +++R
Sbjct: 302 GKRGRIDEAKLLLGEMKKR 320
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 7/351 (1%)
Query: 57 ERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
ERDP+++ + A + + ++A RL+ +RRF E LL L E
Sbjct: 52 ERDPDRVVSILDAIDTASISAASTRHALSLAARRLSRSRRFADAEALLSSH--LTASTTE 109
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
+ ++ Y A + + A+D F + NA L R + +
Sbjct: 110 AHLAAVLCSYASANLPEKAIDAFRSAAPSLPTPNSPLPFNALLSTFIRCRRYRRVPVLFA 169
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ ++F I + S+ I++KA+C KA + M++ G+ P YTTLI + YK
Sbjct: 170 ELSKEFSITPNATSYGILVKAYCMARDDAKAKQALDLMREQGISPTNRIYTTLIDSMYKR 229
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
LW MV C P++AT+NV+ + + + ++M M+ G++PD TY
Sbjct: 230 KMTNEAESLWKEMVESECEPDVATYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTY 289
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N ++ +C+SG L+ AK +Y ++ + + Y+ M+ LC GDF+ + KDS+K
Sbjct: 290 NFLMTSYCKSGKLEDAKVLYHSLAEKGCSADAATYKHMLAELCAYGDFDAGLGIFKDSLK 349
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
+ VP T+ L+EGL K + A ++A V++ P N LS +K +
Sbjct: 350 RRKVPDFRTMKGLVEGLAKGGRVADAKEVVAEVKKMFPE---NLLSGWKKV 397
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 180/360 (50%), Gaps = 9/360 (2%)
Query: 29 AVSLNKFPNREPLVDKP----LEPPALVKLKAERDPEKL-FQLF-KANAHNRIVIENKYA 82
A SL ++ +P + KP L P LV + ++ L Q+F A + N
Sbjct: 25 AASLQQYCTEKPTI-KPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDT 83
Query: 83 FEDTVSRLAGARRFDYIEHLL-EHQKSLPQGR-REGFIMRIMMLYGKAGMIKHAMDTFYD 140
+ + +L+ AR FD +E L+ + + S P + E + ++ YG AG + +M F
Sbjct: 84 YHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLR 143
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
+ +G KR+V+SLN L VL +++ + A E F I +IF+ N+++KA C+
Sbjct: 144 IPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKN 203
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++ AY V+ E+ +G+ P+++TYTT++ + E + M+ +G +P+ T+
Sbjct: 204 DIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYT 263
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
V + R +A +M M++ IEP+EVTY ++I+ C+ A+ ++ ML R
Sbjct: 264 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDR 323
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
MP+ + +I LC++ + A + + +K N +P +S L+ L K + +A
Sbjct: 324 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEA 383
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A +M+ EK I+ + ++ ++I+A C+ +A + EM PD +I A
Sbjct: 279 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDA 338
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+D++ + GLW M+ C P+ A + I L + R +A KL + I P
Sbjct: 339 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSI-PS 397
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+TYN +I G C G L A +++ M R+ PN Y +I L + G+ + +
Sbjct: 398 LLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 457
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ ++ P+ T L EGL+K + A I+++
Sbjct: 458 EMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSM 493
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ FGI P+ T NL++K C+ ++ A KV + L+PN Y T++ GD
Sbjct: 181 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDM 240
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A + ++ + + W P T + L++G K + +A T+M
Sbjct: 241 ESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVM 282
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I CE G L +A + +M + KP+ TY LI K+ + G +
Sbjct: 398 LLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 457
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ GCFPN TF + + L + A K++ + G + D+ ++ L + F G
Sbjct: 458 EMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG-KVDKESWELFLNKFV--G 514
Query: 306 HLD 308
LD
Sbjct: 515 ELD 517
>gi|359494844|ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Vitis vinifera]
Length = 336
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 135/245 (55%)
Query: 40 PLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYI 99
PL K AL LK+E+DP+++ ++ +A A ++ AF +S+LA ++ FD I
Sbjct: 29 PLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSI 88
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
H L+ K+ P R E F+ ++L+G+AGM+ A+ TF MH G RTV+SLNA L
Sbjct: 89 RHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFS 148
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
+++ K +E P+ + I+ ++ S+N V+KAF E G Y ++ EM + GVKP
Sbjct: 149 CILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKP 208
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ ++ L++ FY + + E + +M P ++T+N+R Q L + S + L
Sbjct: 209 NATSFGILLAGFYNEEKYEDVGXVLKMMEEYXMQPGISTYNIRXQSLCKLKXSSERALLD 268
Query: 280 GLMQR 284
G++ R
Sbjct: 269 GILAR 273
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLL-EHQKSLPQGR-REGFIMRIMMLYGKAGMIKHAMD 136
N + + +L+ AR FD +E L+ + + S P + E + ++ YG AG + +M
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMR 141
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F + +G KR+V+SLN L VL +++ + A E F I +IF+ N+++KA
Sbjct: 142 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL 201
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ ++ AY V+ E+ +G+ P+++TYTT++ + E + M+ +G +P+
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+ V + R +A +M M++ IEP+EVTY ++I+ C+ A+ ++
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
ML R MP+ + +I LC++ + A + + +K N +P +S L+ L K +
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 377 PCKA 380
+A
Sbjct: 382 VTEA 385
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A +M+ EK I+ + ++ ++I+A C+ +A + EM + PD +I A
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+D++ + GLW M+ C P+ A + I L + R +A KL ++ I P
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PS 399
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+TYN +I G C G L A +++ M R+ PN Y +I L + G+ + +
Sbjct: 400 LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ ++ P+ T L EGL+K + A I+++
Sbjct: 460 EMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ FGI P+ T NL++K C+ ++ A KV + L+PN Y T++ GD
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A + ++ + + W P T + L++G K + +A T+M
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284
>gi|326528779|dbj|BAJ97411.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534194|dbj|BAJ89447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 140/271 (51%), Gaps = 6/271 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
++L+G+AG++ A+ TF + +SLNA L + + P+
Sbjct: 111 IVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHR 164
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G Y V EM K GVKP T+T I+ FYK+ R +
Sbjct: 165 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 224
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +N R+Q L R+ A L+ M + G +P VTYN +I GF
Sbjct: 225 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPSWVTYNHLIYGF 284
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ K++Y M + L+ + Y T+I +LC+ GDF+ A + + +NW+P
Sbjct: 285 CKEGDLEEVKRLYKEMGMKGLVGDSNFYFTVIFHLCKAGDFDTALSVYNEIAPRNWIPCF 344
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T+ L+ GL +++ +A I+ ++ + P
Sbjct: 345 STMKMLVNGLAGSSRIDEAKGIIEKMKEKFP 375
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 65 QLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML 124
Q+FK+ + F + A + F + + + K + E + +
Sbjct: 49 QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRA 108
Query: 125 YGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHI 182
YGKA + + A++ F M + C+RTV+S N+ L V+ + +A++ + V K +I
Sbjct: 109 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNI 168
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
++ SFN+VIKA C++G++D+A V EM +PDV TY TL+ K++R +
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + M +GCFP+ TFNV I L K + KL+ M G P+EVTYN +I G C
Sbjct: 229 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD A + M+ + +PN Y T+I+ L ++G
Sbjct: 289 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQG 326
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 42/292 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K I A+ +M + GC + + N + L + D+ + + + K + ++
Sbjct: 219 KEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEV 278
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY---------------------- 224
++N +I C G LDKA ++ M P+ +TY
Sbjct: 279 -TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSS 337
Query: 225 -------------TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
+TLIS +K+ + E GLW MV KGC PN+ ++ I L + +
Sbjct: 338 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 397
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A +++ M G P+ TY+ +IKGF ++G+ A +V+ M +PN Y
Sbjct: 398 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 457
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+IH LC++G A +M + + P V S+++ GL C A ++
Sbjct: 458 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL------CNAGSV 503
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q +I ++ +I C G LD+A ++ EM G P+ TY++LI F+K +
Sbjct: 379 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 438
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+W M C PN ++V I L + +A + M G+ PD V Y+ +I G C
Sbjct: 439 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 498
Query: 303 RSGHLDMAKKVYSAMLGRR--LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+G +++ K+++ ML + P+ Y ++ LC++ + A + + + P
Sbjct: 499 NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPD 558
Query: 361 VDTISALLEGLKKNNQP 377
+ T + L L++ P
Sbjct: 559 LITCNIFLNALREKLNP 575
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + G +P+++ Y+ LI ++ + + + MV KGC PN T++ I+
Sbjct: 372 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 431
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
S +A ++ M + P+E+ Y+++I G C G L A +++ MLGR L P+ Y
Sbjct: 432 NSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 491
Query: 331 TMIHYLCQEGDFNLAY-----IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+MIH LC G + ++C++S + P V T + LL L K N
Sbjct: 492 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQ---PDVVTYNILLRALCKQNS 539
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 132/314 (42%), Gaps = 32/314 (10%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
LVK D L + H+ N+YA+ +S L + + E + +K +
Sbjct: 321 GLVKQGRSVDGVHLLSSLEERGHH----ANEYAYSTLISGLFKEEKSE--EAMGLWKKMV 374
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+G + ++ ++ G + G + A + +M GC + ++ +K ++ + +
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
E+ + + +I ++++I CE G L +A ++ M G++PDV+ Y+++
Sbjct: 435 KAIRVWKEMAKNNCVPNEI-CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSM 493
Query: 228 ISAFYKDNRPEIGNGLWNLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
I E+G L+N M+C+ P++ T+N+ ++ L + A L+ M
Sbjct: 494 IHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDR 553
Query: 286 GIEPDEVTYNLVIKGF---------------------CRSGHLDMAKKVYSAMLGRRLMP 324
G PD +T N+ + + + A K+ ML + L P
Sbjct: 554 GCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPP 613
Query: 325 NRKIYQTMIHYLCQ 338
N ++ +I LC+
Sbjct: 614 NASTWERIIPELCK 627
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 12/356 (3%)
Query: 35 FPNREPLVDKPLEPPALVKLKAERDPEKLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGA 93
FPNR + ++ +++ + Q+F A ++ N + + RL+ A
Sbjct: 51 FPNR-----------LVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRA 99
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
R F+ +E LL + E + ++ YG A K A+ TF + +G +R+V+SL
Sbjct: 100 RAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSL 159
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
N L L ++ ++ KF + ++F+ NI+IKA C+ ++ A V EM
Sbjct: 160 NTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMP 219
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+G+ P+V+TYTT++ + ++ + G P+ T+ + + V + R
Sbjct: 220 SMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFT 279
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A K+M M+ G+EP+++TY ++I G+C+ A + + ML ++ +PN + +I
Sbjct: 280 DAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVI 339
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
LC EG A M + +KKN P S L+ L K +A + +R
Sbjct: 340 DVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFER 395
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 47/259 (18%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE------ 238
D ++ I++ + + G A VM EM++ GV+P+ ITY +I + K+ +
Sbjct: 261 DATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLL 320
Query: 239 ----------------------IGNG-------LWNLMVCKGCFPNLATFNVRIQHLVNK 269
G G +W ++ K C P+ A + I L +
Sbjct: 321 NDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKE 380
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
W+A KL +R G +TYN +I G C G L A +++ ML + +PN Y
Sbjct: 381 GNIWEARKLFNEFER-GTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTY 439
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I + G + ++ + K + + T L+EGL K + + I++++
Sbjct: 440 NMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIIS 499
Query: 390 R-----------VPHFSSN 397
VPHF SN
Sbjct: 500 SGAVDFKAWNLFVPHFVSN 518
>gi|224078640|ref|XP_002305587.1| predicted protein [Populus trichocarpa]
gi|222848551|gb|EEE86098.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 165/356 (46%), Gaps = 56/356 (15%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL-EHQKS 108
AL +LK E +PEK+ ++ ++ + ++ F + +LA + F YI+ LL E + S
Sbjct: 39 ALSRLKTETNPEKILEICRSASLTPEANIDRITFSVAIDKLAKSNNFSYIDELLTELRTS 98
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH------LYGCKRTVKSLNAALKVLTE 162
P R E F ++L+GKAGMI HA+ F + H + +VK LN+ L
Sbjct: 99 RPDLRTEQFAAHSIVLFGKAGMIDHAIRLFKEYHEKNQNGVVLSSGSVKLLNSLLYSCIL 158
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ ++ ++ + F I+ ++ ++N +I+AF E G Y ++ EM K GVKP+
Sbjct: 159 AKKYNEVKRVFVDFTKSFKIEPNLDTYNTIIQAFSEGGSSSSCYSILNEMDKKGVKPNTT 218
Query: 223 TYTTLISAFYKDNRPE-IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
T LI+ FYK+ + E +G L + G + +N+RI+ L +RS +A L+G
Sbjct: 219 TIGNLITGFYKEEKYEDVGKVLKMMEEDYGTKAGIDIYNIRIRSLCKLKRSKEAEALLGG 278
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G++P VTY D
Sbjct: 279 CIARGVKPKAVTYR---------------------------------------------D 293
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
F AY +CK+SM+K VP+ T+ L+EGL + KA ++ ++ + FS N
Sbjct: 294 FESAYRICKESMEKKLVPNSSTMKMLVEGLASSGNVEKAKELIGEIKEK---FSKN 346
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 127/246 (51%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y ++A D F M YG TV+S NA L L + + F E+ + I
Sbjct: 139 YAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREM-RRCRISP 197
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++FN+V+ A C+ G L+KA V+ EM+ +G+ P+V++Y TLI+ I L
Sbjct: 198 NSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLK 257
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
NLM G PN+ TFN I + + +AN+ M+ + P+ VTYN +I G+ +
Sbjct: 258 NLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQV 317
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ +MA KVY M+ + + Y +I LC+EG A + K+ K+N VP+ T
Sbjct: 318 GNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTY 377
Query: 365 SALLEG 370
SAL+ G
Sbjct: 378 SALISG 383
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G ++ A++ +M G V S N + ++ L +I L + K ++ ++
Sbjct: 211 KSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHC-NKGLLSIATKLKNLMGKNGLEPNV 269
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I FC+ G L +A EM+ + V P+ +TY TLI+ + + + ++
Sbjct: 270 VTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEE 329
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G ++ T+N I L + ++ +A L+ + + + P+ TY+ +I G C +
Sbjct: 330 MMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKN 389
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHY------------------------------- 335
D A ++Y +M+ PN + ++ +
Sbjct: 390 SDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLE 449
Query: 336 ----LCQEGDFNLAYIMCKDSMKKNWVP 359
LCQ G NLA +C + + +P
Sbjct: 450 IYDGLCQCGKENLAMKLCHEMEARRLIP 477
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ +L + N+ +++ M G P + + N + L++ R A M+
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMR 191
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
R I P+ T+NLV+ C+SG L+ A +V M + PN Y T+I C +G +
Sbjct: 192 RCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLS 251
Query: 344 LAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKAN 381
+A + K+ M KN + P+V T ++L+ G K + +AN
Sbjct: 252 IATKL-KNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEAN 289
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 123/218 (56%), Gaps = 2/218 (0%)
Query: 125 YGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHI 182
YGKA + + A++ F M + C+RTV+S N+ L V+ + +A++ + V K +I
Sbjct: 125 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNI 184
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
++ SFN+VIKA C++G++D+A V EM +PDV TY TL+ K++R +
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + M +GCFP+ TFNV I L K + KL+ M G P+EVTYN +I G C
Sbjct: 245 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD A + M+ + +PN Y T+I+ L ++G
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQG 342
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 42/292 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K I A+ +M + GC + + N + L + D+ + + + K + ++
Sbjct: 235 KEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEV 294
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY---------------------- 224
++N +I C G LDKA ++ M P+ +TY
Sbjct: 295 -TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSS 353
Query: 225 -------------TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
+TLIS +K+ + E GLW MV KGC PN+ ++ I L + +
Sbjct: 354 LEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGK 413
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A +++ M G P+ TY+ +IKGF ++G+ A +V+ M +PN Y
Sbjct: 414 LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSV 473
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+IH LC++G A +M + + P V S+++ GL C A ++
Sbjct: 474 LIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL------CNAGSV 519
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q +I ++ +I C G LD+A ++ EM G P+ TY++LI F+K +
Sbjct: 395 QPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 454
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+W M C PN ++V I L + +A + M G+ PD V Y+ +I G C
Sbjct: 455 VWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLC 514
Query: 303 RSGHLDMAKKVYSAMLGRR--LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+G +++ K+++ ML + P+ Y ++ LC++ + A + + + P
Sbjct: 515 NAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPD 574
Query: 361 VDTISALLEGLKKNNQP 377
+ T + L L++ P
Sbjct: 575 LITCNIFLNALREKLNP 591
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 8/171 (4%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + G +P+++ Y+ LI ++ + + + MV KGC PN T++ I+
Sbjct: 388 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 447
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
S +A ++ M + P+E+ Y+++I G C G L A +++ MLGR L P+ Y
Sbjct: 448 NSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 507
Query: 331 TMIHYLCQEGDFNLAY-----IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+MIH LC G + ++C++S + P V T + LL L K N
Sbjct: 508 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQ---PDVVTYNILLRALCKQNS 555
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 132/314 (42%), Gaps = 32/314 (10%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
LVK D L + H+ N+YA+ +S L + + E + +K +
Sbjct: 337 GLVKQGRSVDGVHLLSSLEERGHH----ANEYAYSTLISGLFKEEKSE--EAMGLWKKMV 390
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+G + ++ ++ G + G + A + +M GC + ++ +K ++ + +
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
E+ + + +I ++++I CE G L +A ++ M G++PDV+ Y+++
Sbjct: 451 KAIRVWKEMAKNNCVPNEI-CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSM 509
Query: 228 ISAFYKDNRPEIGNGLWNLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
I E+G L+N M+C+ P++ T+N+ ++ L + A L+ M
Sbjct: 510 IHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDR 569
Query: 286 GIEPDEVTYNLVIKGF---------------------CRSGHLDMAKKVYSAMLGRRLMP 324
G PD +T N+ + + + A K+ ML + L P
Sbjct: 570 GCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPP 629
Query: 325 NRKIYQTMIHYLCQ 338
N ++ +I LC+
Sbjct: 630 NASTWERIIPELCK 643
>gi|357138274|ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 170/351 (48%), Gaps = 32/351 (9%)
Query: 48 PPALVKLK-----AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
P LV++K A P+ L LF N+ + ++ F V+RLA A R D + +
Sbjct: 43 PAELVRIKNSIRSAATGPDDLATLFLRALPNQAFLGDRPIFSLAVTRLASAGRRDLVFSI 102
Query: 103 LEHQ-KSLPQGR-REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
L +LP EGF++R++ LY AGM +H++ TF + R +L AA
Sbjct: 103 LSSSLTALPAPHPSEGFLIRLISLYAAAGMPQHSLSTFR-LVKPATDRVFSALLAAYHD- 160
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKP 219
T DL A+ AF ++P + Q + S N+++K+ G + A V EM K GV+P
Sbjct: 161 TAQHDL-AVTAF-RDLPAELSFQPGVVSHNVLLKSMVATGDVAGARQVFDEMADKAGVQP 218
Query: 220 DVITYTTLISAFYKDNR--------PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
D+++ ++ + K EI G L PN+ T+N+R+ L K R
Sbjct: 219 DIVSCNEVLRGYLKTADYAAFDQLFKEIAGGKRRLK------PNVTTYNLRMAALCAKGR 272
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPN 325
S++A +L+ +M G+ P+ ++N VI G C+ G + A ++ M G+ + PN
Sbjct: 273 SFEAEELLDVMGANGVPPNRESFNTVIGGLCKEGEVGAAAALFKRMPEVPRPNGKGVSPN 332
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ Y ++ L ++ F+ A +CK+ + W P + L++GL K+ +
Sbjct: 333 FETYIMLLEALVEKRVFSPALEVCKECLANKWAPPFQAVKGLIQGLVKSRK 383
>gi|414884761|tpg|DAA60775.1| TPA: hypothetical protein ZEAMMB73_412328 [Zea mays]
Length = 581
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 87/130 (66%)
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R WQAN++ M GI+ DE+TYNL+IKGF G +MAK V+ AM R PN K+YQ
Sbjct: 285 RGWQANEMARKMYVAGIKLDEITYNLIIKGFFMRGEHEMAKTVFGAMHWRGCKPNSKVYQ 344
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
TM+HYLC+ DF+LA+ +CKDSM+KNW P+VDTI+ LL+GL ++ IM LV R
Sbjct: 345 TMVHYLCERRDFDLAFRLCKDSMEKNWFPNVDTINQLLKGLMAISKDSNGKEIMKLVTGR 404
Query: 391 VPHFSSNQLS 400
P +S L+
Sbjct: 405 KPSYSDASLA 414
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 8/139 (5%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKL---GVKPDVITYTTLISAFYKDNRPEIGNG 242
+F +N I MG + + +K+ G+K D ITY +I F+ E+
Sbjct: 272 VFVYNCAI-----MGCWGRGWQANEMARKMYVAGIKLDEITYNLIIKGFFMRGEHEMAKT 326
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++ M +GC PN + + +L +R A +L P+ T N ++KG
Sbjct: 327 VFGAMHWRGCKPNSKVYQTMVHYLCERRDFDLAFRLCKDSMEKNWFPNVDTINQLLKGLM 386
Query: 303 RSGHLDMAKKVYSAMLGRR 321
K++ + GR+
Sbjct: 387 AISKDSNGKEIMKLVTGRK 405
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 155/313 (49%), Gaps = 4/313 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLE--HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + +L+ AR F +E LL H+ + G E + ++ YG AG A+
Sbjct: 94 NYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCG--ENIFINVIRNYGLAGKPDFALR 151
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
TF + + +R+V+SLN L +++ + A K+ + ++F+ NI+IKA
Sbjct: 152 TFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKAL 211
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ ++ A V+ EM +G+ P+V+TYTT++ + N ++ + +G P+
Sbjct: 212 CKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDA 271
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+ + + + R A KLM M G+EP+EVTY ++++ +C+ A+ +
Sbjct: 272 TTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDD 331
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
ML R+ +P+ + +I LC+ G A + K +KKN +P +S L+ L K +
Sbjct: 332 MLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGK 391
Query: 377 PCKANTIMALVQR 389
+A + +R
Sbjct: 392 VWEARKLFGEFER 404
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 36/237 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------- 237
D ++ I++ +CE G L A +M +M + GV+P+ +TY ++ A+ K+ +
Sbjct: 270 DATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLL 329
Query: 238 ----------------------------EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
E LW M+ K C P+ A + I L +
Sbjct: 330 DDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKE 389
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ W+A KL G +R I P +TYN +I G C G L A K++ M+ + PN Y
Sbjct: 390 GKVWEARKLFGEFERGAI-PSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTY 448
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+I + G+ + ++ + +P+ T + L+E L K + + ++++
Sbjct: 449 NMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM 505
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I CE G L +A + +M + G KP+ TY LI F K + G +
Sbjct: 410 LLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILE 469
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL-MQRFGIEPDEVTYNLVIKGFCRS 304
M+ C PN +T+ + I+ L + +K++ + M G++ D +++L +
Sbjct: 470 EMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGVDSD--SWDLFLNKAV-- 525
Query: 305 GHLDMAKKVYSA 316
G+LD K +
Sbjct: 526 GNLDRGSKALDS 537
>gi|115450015|ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|125584252|gb|EAZ25183.1| hypothetical protein OsJ_08983 [Oryza sativa Japonica Group]
gi|215769058|dbj|BAH01287.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 423
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 35/358 (9%)
Query: 56 AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR- 114
A PE L LF + + + ++ F +V RLA A R D + +L +
Sbjct: 54 AAHTPEALADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHP 113
Query: 115 -EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF 172
EGF++R++ LY AGM H++ TF + + ++L+A L ++R +AIQAF
Sbjct: 114 SEGFLIRLISLYSAAGMPDHSLSTFRIV----TPPSDRALSALLSAYHDNRLYDRAIQAF 169
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISA- 230
+P + I+ + S N+++K+F G L A + EM K V+PD+++ ++
Sbjct: 170 -RTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKGY 228
Query: 231 -----------FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
F KDN G + PN++T+N+R+ L +K RS++A +L+
Sbjct: 229 LNAADYAAFDQFLKDNTTAAGGK-------RRLKPNVSTYNLRMASLCSKGRSFEAAELL 281
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMI 333
M+ G+ P+ ++N VI+G C+ G + A ++ M G+ ++PN + Y ++
Sbjct: 282 DAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLL 341
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
L +G F A + K+ ++ W P + L++GL K+ + A + A+ R+V
Sbjct: 342 EGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEV-AMAMRKV 398
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 160/361 (44%), Gaps = 44/361 (12%)
Query: 65 QLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML 124
Q+FK+ F + A +R F +I +L+ K + E + I
Sbjct: 74 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKA 133
Query: 125 YGKAGMIKHAMDTFY----DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV--PE 178
GKA + A++ F+ D+H CK+TVKS N+ L V+ + D F + V
Sbjct: 134 CGKAHLPGEAVNFFHRMANDLH---CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 190
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
Q ++ ++N++IKA C++G +D+A EM PDV TY+TL++ K+ R +
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + M +GC PN TFNV I L +A KL+ M G P+EVTYN +I
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNR-------------------------------- 326
G C G LD A + M+ + +PN+
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370
Query: 327 ---KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
IY ++I L +EG A + K+ +K P+V A ++GL ++ +P +A I
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430
Query: 384 M 384
+
Sbjct: 431 L 431
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I A+DTF +M L C V + + + L + R + FL++ + +
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE-AVFLLDEMQAEGCLPNP 268
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN++I A + G L +A ++ M G P+ +TY TLI + + L
Sbjct: 269 VTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEK 328
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C PN T+ I LV +RR+ ++ M+ G + +E Y+ +I G + G
Sbjct: 329 MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGK 388
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +++ M + PN +Y I LC++ + A + ++ + K ++P+ T S+
Sbjct: 389 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448
Query: 367 LLEGLKKNNQPCKA 380
L++G K KA
Sbjct: 449 LMKGFFKKGDSQKA 462
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + I C D+A ++ EM G P+ TY++L+ F+K + +W
Sbjct: 407 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVW 466
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + N+ +V + L R +A + M G++PD V Y+ +IKG C
Sbjct: 467 KEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV 526
Query: 305 GHLDMAKKVYSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G +D K++ M + + P+ Y + + LC++ + A + + + P
Sbjct: 527 GSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSL 586
Query: 363 TISALLEGLKKNNQP 377
T + LE L++ P
Sbjct: 587 TCNIFLETLRERINP 601
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 36/259 (13%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
+ N+ + ++ L RR + H+L + Q E ++ K G ++A+
Sbjct: 335 VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVR 394
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME------VPEKF---------- 180
+ +M GCK V A + L + L E +P F
Sbjct: 395 LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFF 454
Query: 181 ------------------HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ ++ ++++ CE G L +A V M G+KPDV+
Sbjct: 455 KKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVV 514
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
Y+++I + G L+ M C+ P++ T+N+ L + +A L+
Sbjct: 515 AYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLN 574
Query: 281 LMQRFGIEPDEVTYNLVIK 299
M G +PD +T N+ ++
Sbjct: 575 SMLDEGCDPDSLTCNIFLE 593
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 183/386 (47%), Gaps = 23/386 (5%)
Query: 8 RRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLV-DKPLEPP----------------- 49
R FCH + + + +S +F PLV D P E
Sbjct: 2 RFFCHKHRLLSTSSATSYSFPWISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHES 61
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A+ +K E+DP+ ++F + N + + +LA ++F ++ LL HQ +
Sbjct: 62 AINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALL-HQMTY 120
Query: 110 PQGR-REGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLK 167
+ E + +M + K+ + + ++ FY + + K ++K+++ L +L ES+ +
Sbjct: 121 ETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQID 180
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTT 226
Q L+ V E ++ + FNI++K C+ G L+ A VM EM+K P+VITY+T
Sbjct: 181 LAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYST 240
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI + R + L+ MV K P+ T++V I+ + ++ +A K+M M+
Sbjct: 241 LIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSN 300
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G +P+ Y++++ GFC+ G L+ AK+V+ M L P+ Y T+I+ C G + A
Sbjct: 301 GCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEA 360
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ K+ + T + LL+GL
Sbjct: 361 MELLKEMTEMKCKADAVTFNVLLKGL 386
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 147/321 (45%), Gaps = 20/321 (6%)
Query: 65 QLFKANAHNRIVIENKYAFEDTVSR-------------LAGARRFDYIEHLLEHQKSLPQ 111
+K++ H R V+E YA + V L +++ D + L + +
Sbjct: 136 HFYKSSLHER-VLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLK 194
Query: 112 GRREGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRT---VKSLNAALKVLTESRDLK 167
R I I++ + K+G ++ A++ ++M +R+ V + + + L + LK
Sbjct: 195 VRPNTCIFNILVKHHCKSGDLESALEVMHEMK--KSRRSYPNVITYSTLIDGLCGNGRLK 252
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
E+ K I D +++++IK FC G D+A +M M+ G P+V Y+ L
Sbjct: 253 EAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVL 312
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
++ F K+ R E +++ M G P+ + I R +A +L+ M
Sbjct: 313 MNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKC 372
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+ D VT+N+++KG CR G D A ++ + + N+ Y+ ++++LCQ+G+ +
Sbjct: 373 KADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCA 432
Query: 348 MCKDSMKKNWVPSVDTISALL 368
+ + + +VP T + LL
Sbjct: 433 LLGLMLSRGFVPHYATSNELL 453
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F++++++ FC+ G L++A V EM+ G+KPD + YTTLI+ F R + L
Sbjct: 305 NVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELL 364
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C + TFNV ++ L + R +A +++ + G+ ++ +Y +V+ C+
Sbjct: 365 KEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQK 424
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ + + ML R +P+ ++ LC+ G + A + + P +
Sbjct: 425 GELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSW 484
Query: 365 SALLE 369
+ L+E
Sbjct: 485 AHLIE 489
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 114/285 (40%), Gaps = 8/285 (2%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF----DYIEHLLEHQKSLPQGRR 114
D E ++ +R N + + L G R + E ++ + LP
Sbjct: 214 DLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALT 273
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
+++ GKA + M+ M GC V + + + + L+ +
Sbjct: 274 YSVLIKGFCHGGKADRARKIMEF---MRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFD 330
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ ++ D + +I FC +G +D+A ++ EM ++ K D +T+ L+ ++
Sbjct: 331 EMKSS-GLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCRE 389
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R + + + +G + N ++ + + L K ++ L+GLM G P T
Sbjct: 390 GRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATS 449
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
N ++ C +G +D A + P K + +I Y+C+E
Sbjct: 450 NELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRE 494
>gi|125524099|gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 175/358 (48%), Gaps = 35/358 (9%)
Query: 56 AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR- 114
A PE L LF + + + ++ F +V RLA A R D + +L +
Sbjct: 54 AAHTPEALADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHP 113
Query: 115 -EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF 172
EGF++R++ LY AGM H++ TF + + ++L+A L ++R +AIQAF
Sbjct: 114 SEGFLIRLISLYSAAGMPDHSLSTFRIV----TPPSDRALSALLSAYHDNRLYDRAIQAF 169
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISA- 230
+P + I+ + S N+++K+F G L A + EM K V+PD+++ ++
Sbjct: 170 -RTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSCNEILKGY 228
Query: 231 -----------FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
F KDN G + PN++T+N+R+ L +K RS++A +L+
Sbjct: 229 LNAADYAAFDQFLKDNTTAAGGK-------RRLKPNVSTYNLRMASLCSKGRSFEAAELL 281
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMI 333
M+ G+ P+ ++N VI+G C+ G + A ++ M G+ ++PN + Y ++
Sbjct: 282 DAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLL 341
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
L +G F A + K+ ++ W P + L++GL K+ + A + A+ R+V
Sbjct: 342 EGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEV-AMAMRKV 398
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 160/361 (44%), Gaps = 44/361 (12%)
Query: 65 QLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML 124
Q+FK+ F + A +R F +I +L+ K + E + I
Sbjct: 50 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKA 109
Query: 125 YGKAGMIKHAMDTFY----DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV--PE 178
GKA + A++ F+ D+H CK+TVKS N+ L V+ + D F + V
Sbjct: 110 CGKAHLPGEAVNFFHRMANDLH---CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 166
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
Q ++ ++N++IKA C++G +D+A EM PDV TY+TL++ K+ R +
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + M +GC PN TFNV I L +A KL+ M G P+EVTYN +I
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNR-------------------------------- 326
G C G LD A + M+ + +PN+
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346
Query: 327 ---KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
IY ++I L +EG A + K+ +K P+V A ++GL ++ +P +A I
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406
Query: 384 M 384
+
Sbjct: 407 L 407
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I A+DTF +M L C V + + + L + R + FL++ + +
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE-AVFLLDEMQAEGCLPNP 244
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN++I A + G L +A ++ M G P+ +TY TLI + + L
Sbjct: 245 VTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEK 304
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C PN T+ I LV +RR+ ++ M+ G + +E Y+ +I G + G
Sbjct: 305 MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGK 364
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +++ M + PN +Y I LC++ + A + ++ + K ++P+ T S+
Sbjct: 365 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424
Query: 367 LLEGLKKNNQPCKA 380
L++G K KA
Sbjct: 425 LMKGFFKKGDSQKA 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + I C D+A ++ EM G P+ TY++L+ F+K + +W
Sbjct: 383 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVW 442
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + N+ +V + L R +A + M G++PD V Y+ +IKG C
Sbjct: 443 KEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDV 502
Query: 305 GHLDMAKKVYSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G +D K++ M + + P+ Y + + LC++ + A + + + P
Sbjct: 503 GSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSL 562
Query: 363 TISALLEGLKKNNQP 377
T + LE L++ P
Sbjct: 563 TCNIFLETLRERINP 577
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 36/259 (13%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
+ N+ + ++ L RR + H+L + Q E ++ K G ++A+
Sbjct: 311 VPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVR 370
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME------VPEKF---------- 180
+ +M GCK V A + L + L E +P F
Sbjct: 371 LWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFF 430
Query: 181 ------------------HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ ++ ++++ CE G L +A V M G+KPDV+
Sbjct: 431 KKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVV 490
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
Y+++I + G L+ M C+ P++ T+N+ L + +A L+
Sbjct: 491 AYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLN 550
Query: 281 LMQRFGIEPDEVTYNLVIK 299
M G +PD +T N+ ++
Sbjct: 551 SMLDEGCDPDSLTCNIFLE 569
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 167/375 (44%), Gaps = 46/375 (12%)
Query: 36 PNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARR 95
PN++ L+ E L +LK +R+ + F A A++ + + RL
Sbjct: 33 PNKQQLLQ---ESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECE 89
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
D ++++L+ K E + I+ Y + G + A+ FY + +GCK TV+ N
Sbjct: 90 MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L + I + + I ++F++NI++KA C+ +D A+ + VEM
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIP-NVFTYNILLKALCKNDRVDAAHKLFVEMSNK 208
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF-PNLATFNVRIQHLVNKRRSWQ 274
G PD +TYTT++S+ K + + L G F P++ +N I + + R
Sbjct: 209 GCPPDAVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNALIDGMCKEGRIEV 262
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA------------------------ 310
A KL+G M G++P+ V+Y+ +I C SG++++A
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322
Query: 311 -----KKVYSAMLGRRLM------PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
K+Y A+ +LM PN Y T+IH LC G A +C + +P
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 360 SVDTISALLEGLKKN 374
+V T S L++G K+
Sbjct: 383 NVTTYSILIDGFAKS 397
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 3/247 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+G ++ A F M L GC + + +K + +A+ + + + + + ++
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG--CEPNV 349
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C G L++A V +MQ+ G P+V TY+ LI F K + WN
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC PN+ T+ + L QAN L+ M G P+ +T+N IKG C +G
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A K+ M G +PN Y ++ L + + A+ + ++ +N P++ T +
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 367 LLEGLKK 373
+L G +
Sbjct: 530 VLYGFSR 536
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A+ M GC V + + + +S DL + + ++ +
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH-GCRPNVVT 421
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ C+ + D+A ++ +M G P+ IT+ T I + R E L M
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC PN+ T+N + L + +A L ++ ++P+ VTYN V+ GF R+G +
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL-AYIMCKDSMKKNWVPSVDTISAL 367
A +++ L R P+ Y TMIH C++G + A ++ + S K W P + T ++L
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 601
Query: 368 LEG 370
+ G
Sbjct: 602 IWG 604
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S++ +I + C G ++ A+ + +M G ++ T+T LI + + LW
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM+ GC PN+ +N I L + +A ++ MQR G P+ TY+++I GF +S
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + ++ M+ PN Y M+ LC+ F+ A + + + P+ T
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ ++GL N + M L++R H ++ + +L
Sbjct: 458 NTFIKGLCGNG---RVEWAMKLLERMQGHGCLPNITTYNELL 496
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I C+ G ++ A ++ EM GV P+V++Y+ +I++ E+ L+ M
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+GC N+ TF I+ + + ++A L LM + G EP+ V YN +I G C +G L+
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V M +PN Y +I + GD A + P+V T + ++
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426
Query: 369 EGLKKNNQPCKANTIM 384
+ L KN+ +AN+++
Sbjct: 427 DVLCKNSMFDQANSLV 442
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 43/248 (17%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K+G + A +T+ M +GC+ V + + VL ++ + + EK ++
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV----EKMTLEG 449
Query: 185 ---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ +FN IK C G ++ A ++ MQ G P++ TY L+ A ++ N+ E
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL----- 296
GL+ + + PNL T+N + +A +L G G PD +TYN
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Query: 297 -------------------------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+I G C +++ A + + + PN
Sbjct: 570 CKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 326 RKIYQTMI 333
+ ++
Sbjct: 630 FATWNALV 637
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 167/375 (44%), Gaps = 46/375 (12%)
Query: 36 PNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARR 95
PN++ L+ E L +LK +R+ + F A A++ + + RL
Sbjct: 33 PNKQQLLQ---ESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECE 89
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
D ++++L+ K E + I+ Y + G + A+ FY + +GCK TV+ N
Sbjct: 90 MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L + I + + I ++F++NI++KA C+ +D A+ + VEM
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIP-NVFTYNILLKALCKNDRVDAAHKLFVEMSNK 208
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF-PNLATFNVRIQHLVNKRRSWQ 274
G PD +TYTT++S+ K + + L G F P++ +N I + + R
Sbjct: 209 GCPPDAVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNALIDGMCKEGRIEV 262
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA------------------------ 310
A KL+G M G++P+ V+Y+ +I C SG++++A
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322
Query: 311 -----KKVYSAMLGRRLM------PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
K+Y A+ +LM PN Y T+IH LC G A +C + +P
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 360 SVDTISALLEGLKKN 374
+V T S L++G K+
Sbjct: 383 NVTTYSILIDGFAKS 397
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 3/247 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+G ++ A F M L GC + + +K + +A+ + + + + + ++
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG--CEPNV 349
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C G L++A V +MQ+ G P+V TY+ LI F K + WN
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC PN+ T+ + L QAN L+ M G P+ +T+N IKG C +G
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A K+ M G +PN Y ++ L + + A+ + ++ +N P++ T +
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 367 LLEGLKK 373
+L G +
Sbjct: 530 VLYGFSR 536
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIF 187
G + A+D + M GC+ V + N + L + L+ A+Q + + ++ ++
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ--VCDQMQRSGCLPNVT 385
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I F + G L A M G +P+V+TYT ++ K++ + N L M
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM 445
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG--------------------- 286
+GC PN TFN I+ L R A KL+ MQ G
Sbjct: 446 TLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKY 505
Query: 287 --------------IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
++P+ VTYN V+ GF R+G + A +++ L R P+ Y TM
Sbjct: 506 EEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565
Query: 333 IHYLCQEGDFNL-AYIMCKDSMKKNWVPSVDTISALLEG 370
IH C++G + A ++ + S K W P + T ++L+ G
Sbjct: 566 IHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S++ +I + C G ++ A+ + +M G ++ T+T LI + + LW
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM+ GC PN+ +N I L + +A ++ MQR G P+ TY+++I GF +S
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + ++ M+ PN Y M+ LC+ F+ A + + + P+ T
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ ++GL N + M L++R H ++ + +L
Sbjct: 458 NTFIKGLCGNG---RVEWAMKLLERMQGHGCLPNITTYNELL 496
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I C+ G ++ A ++ EM GV P+V++Y+ +I++ E+ L+ M
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+GC N+ TF I+ + + ++A L LM + G EP+ V YN +I G C +G L+
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V M +PN Y +I + GD A + P+V T + ++
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426
Query: 369 EGLKKNNQPCKANTIM 384
+ L KN+ +AN+++
Sbjct: 427 DVLCKNSMFDQANSLV 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K+G + A +T+ M +GC+ V + + VL ++ + + EK ++
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV----EKMTLEG 449
Query: 185 ---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ +FN IK C G ++ A ++ MQ G P++ TY L+ A ++ N+ E
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ + + PNL T+N + +A +L G G PD +TYN +I +
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Query: 302 CRSGHLDMAKKV---YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ G + +A ++ S+M + P+ Y ++I C + A ++ +
Sbjct: 570 CKQGKVKIAAQLVERVSSM--KEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGIC 627
Query: 359 PSVDTISALL 368
P+ T +AL+
Sbjct: 628 PNFATWNALV 637
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I+ A+ +M G V S + + L S +++ A ++ + +I
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR-GCDANI 314
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F +IK G L +A + M + G +P+V+ Y TLI + E + +
Sbjct: 315 HTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ 374
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN+ T+++ I A++ M G P+ VTY ++ C++
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A + M PN + T I LC G A + + +P++ T +
Sbjct: 435 FDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494
Query: 367 LLEGLKKNNQ 376
LL+ L + N+
Sbjct: 495 LLDALFRMNK 504
>gi|210077731|gb|ACJ07054.1| putative membrane-associated salt-inducible protein [Aegilops
speltoides]
Length = 289
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 6/242 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
++L+G+AG++ A+ TF + +SLNA L + + P+
Sbjct: 54 IVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHR 107
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G Y V EM K GVKP T+T I+ FYK+ R +
Sbjct: 108 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 167
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +N R+Q L R+ A L+ M + G +P+ VTYN +I GF
Sbjct: 168 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 227
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y T+I +LC+ GDF+ A + + + +NWVP
Sbjct: 228 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPCF 287
Query: 362 DT 363
T
Sbjct: 288 ST 289
>gi|210077729|gb|ACJ07053.1| putative membrane-associated salt-inducible protein [Secale
cereale]
Length = 289
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 6/242 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
++L+G+AG++ A+ TF + +SLNA L + + P+
Sbjct: 54 IVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHR 107
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G Y V EM K GVKP T+T I+ FYK+ R +
Sbjct: 108 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKEGVKPTATTFTAAIAGFYKEERFDDVE 167
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +N R+Q L R+ A L+ M + G +P+ VTYN +I GF
Sbjct: 168 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 227
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y T+I +LC+ GDF+ A + + + +NWVP
Sbjct: 228 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPCF 287
Query: 362 DT 363
T
Sbjct: 288 ST 289
>gi|210077733|gb|ACJ07055.1| putative membrane-associated salt-inducible protein [Triticum
monococcum]
Length = 277
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 6/242 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
++L+G+AG++ A+ TF + +SLNA L + + P+
Sbjct: 42 IVLFGQAGLLPDAITTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHR 95
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G Y V EM K GVKP T+T I+ FYK+ R +
Sbjct: 96 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 155
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM GC +L +N R+Q L R+ A L+ M + G +P+ VTYN +I GF
Sbjct: 156 KVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 215
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y T+I +LC+ GDF+ A + + + +NWVP
Sbjct: 216 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKSGDFDTALGVYNEIIPRNWVPCF 275
Query: 362 DT 363
T
Sbjct: 276 ST 277
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 155/345 (44%), Gaps = 38/345 (11%)
Query: 65 QLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML 124
++FK+ +F + A + F +E +L K + E + +
Sbjct: 46 EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105
Query: 125 YGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV--PEKFH 181
YGKA + + A+D F+ M + CK+TVKS N+ L V+ + F V + +
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I + +FN+VIKA C +G++DKA V E+ PD TY+TL+ K+ R +
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAV 225
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + M +G FPNL FNV I L K +A KL+ M G P+EVTYN ++ G
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285
Query: 302 CRSGHLDMAKKVYSAMLGRRLMP-----------------------------------NR 326
C G L+ A + + M+ + +P N
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+Y ++I LC+EG FN A + K+ + K P+ SAL++GL
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGL 390
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 5/246 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
+ G++ A++ F ++ L C + + + L + + + L M+V F
Sbjct: 182 RLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFP--- 238
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +FN++I A C+ G L +A ++ M G P+ +TY L+ + E L
Sbjct: 239 NLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLL 298
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV C PN TF I V + R+ +++ ++ G +E Y+ +I G C+
Sbjct: 299 NQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKE 358
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A +++ M+G+ PN +Y +I LC+EG + A + K ++P+ T
Sbjct: 359 GKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTY 418
Query: 365 SALLEG 370
S+L+ G
Sbjct: 419 SSLMRG 424
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 7/257 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A +M L GC + NA + L L+ + L ++ + D+
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F +I F G V+V ++ G + + Y++LIS K+ + LW
Sbjct: 312 -TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKE 370
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC PN ++ I L + + +A + M+ G P+ TY+ +++G+ +G
Sbjct: 371 MVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGD 430
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A V+ M + N Y +I+ LC++G F A ++ K + + V S+
Sbjct: 431 SHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSS 490
Query: 367 LLEGLKKNNQPCKANTI 383
++ G C AN +
Sbjct: 491 MIHGF------CNANLV 501
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I C G LD+A + EM+ G P+ TY++L+ +++ +W M
Sbjct: 383 YSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMA 442
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C N +++ I L + +A + M GI+ D V Y+ +I GFC + ++
Sbjct: 443 NNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVE 502
Query: 309 MAKKVYSAML--GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
K+++ ML G + P+ Y +++ C + A + + + P T
Sbjct: 503 QGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDI 562
Query: 367 LLEGLKKNNQP 377
L+ L++N P
Sbjct: 563 FLKTLRENMNP 573
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 224 YTTLISAFYKDNRPE----IGNGLWNLMVCKGCFPNL-ATFNVRIQHLVNKRRSWQANKL 278
+ + A+ K + PE + + +W CK + + NV +Q + R N +
Sbjct: 99 FIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHV 158
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ + I P+ +T+NLVIK CR G +D A +V+ + R P+ Y T++H LC+
Sbjct: 159 VA-SKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCK 217
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
E + A + + + P++ + L+ L K
Sbjct: 218 EERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCK 252
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD-NRPEIG 240
+Q D+ ++NI++ AFC + +A ++ M G PD IT + ++ N P+ G
Sbjct: 518 VQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDG 577
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ +V + LV ++R+ A+K++ +M + P T+ +V++
Sbjct: 578 REFLDELVVR---------------LVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQ 622
Query: 301 FCR 303
C+
Sbjct: 623 VCK 625
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 164/322 (50%), Gaps = 5/322 (1%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
+K E DP++ ++F A R N + + +LA +++F I+ +L HQ + +
Sbjct: 67 IKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVL-HQMTYETCK 125
Query: 114 -REGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLKAIQA 171
EG + +M + K + + ++ F + + K ++K+++ L +L ES + +
Sbjct: 126 FHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRK 185
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISA 230
FL+ + +++ + FNI++K C+ G +D A+ V+ EM+K V P++ITY+TLI+
Sbjct: 186 FLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLING 245
Query: 231 FYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
R + L+ MV K P+ T+N I + + +A K+M M++ G P
Sbjct: 246 LCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNP 305
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ Y+ ++ GFC+ G L+ AK+V+ M L P+ Y T+I++ C+ G + A +
Sbjct: 306 NVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELL 365
Query: 350 KDSMKKNWVPSVDTISALLEGL 371
KD + T + +L GL
Sbjct: 366 KDMRENKCRADTVTFNVILGGL 387
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME +K ++F+++ ++ FC+ G L++A V EM+ LG+KPD + YTTLI+ F
Sbjct: 294 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 353
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ R + L M C + TFNV + L + R +A ++ + G+ ++
Sbjct: 354 RAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKA 413
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+Y +V+ CR G L A ++ MLGR ++P+ ++ +LC+ G A +
Sbjct: 414 SYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGL 473
Query: 353 MKKNWVPSVDTISALLE 369
++ + P ++ + L+E
Sbjct: 474 LELGFKPEPNSWALLVE 490
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L S LK E+ K I D ++N +I FC +D+A +M M+K G P
Sbjct: 246 LCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNP 305
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+V Y+ L++ F K+ R E +++ M G P+ + I R +A +L+
Sbjct: 306 NVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELL 365
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M+ D VT+N+++ G CR G + A+ + + + N+ Y+ +++ LC+E
Sbjct: 366 KDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCRE 425
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
G+ A + + + +P T + LL L + + + +MAL+
Sbjct: 426 GELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGK--VGDAVMALL 471
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 120/294 (40%), Gaps = 2/294 (0%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D + F++ + + + N + ++ L G+ R L E S Q +
Sbjct: 215 DIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALT 274
Query: 119 MRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
++ + + A+ M GC V + +A + + L+ + E+
Sbjct: 275 YNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM- 333
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ ++ D + +I FC G +D+A ++ +M++ + D +T+ ++ ++ R
Sbjct: 334 KSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRF 393
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E G+ + +G + N A++ + + L + +A +L+GLM G+ P T N +
Sbjct: 394 EEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNEL 453
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+ C +G + A +L P + ++ +C+E A+ + D
Sbjct: 454 LVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDD 507
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-PDEVTYNLVIKGFCRSGHLDMAKK 312
PN FN+ ++H A +++ M++ + P+ +TY+ +I G C SG L A +
Sbjct: 198 PNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIE 257
Query: 313 VYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
++ M+ + +++P+ Y +I+ C + A + + MKKN P+V SAL+ G
Sbjct: 258 LFEEMVSKDQILPDALTYNALINGFCHGEKVDRA-LKIMEFMKKNGCNPNVFNYSALMNG 316
Query: 371 LKKNNQ 376
K +
Sbjct: 317 FCKEGR 322
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 17/383 (4%)
Query: 9 RFCHTAAAAAADA---------IALNNIRAVSLNKFPNREPLVDKP--LEPPALVKLKA- 56
R TA AA D +A + ++ L + P+ P L P +V + +
Sbjct: 51 RSASTAVGAAVDPFTDHPSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISR 110
Query: 57 ERDPEKLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE--HQKSLPQGR 113
+++ + Q+F A +R N + + +L+ AR F+ +E L+ H+ + G
Sbjct: 111 QQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCG- 169
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
E + ++ YG AG K A+ TF + +G + +V+S N L L +++ +
Sbjct: 170 -ENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMF 228
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+KF I ++F+ NI++KA C+ +D A V+ EM +G P+V+TYTT++ +
Sbjct: 229 KNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVS 288
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
++ ++ +G P+ T+ + + K R A K+M M+ +EP++VT
Sbjct: 289 KGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVT 348
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++I+ +C+ + ML ++ +P+ + +I LC+EG +A + K +
Sbjct: 349 YGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLL 408
Query: 354 KKNWVPSVDTISALLEGLKKNNQ 376
KKN P S L+ L K +
Sbjct: 409 KKNCTPDNAITSTLIHWLCKEGK 431
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 179 KFHIQF--DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
KFH F + ++ +I+ + + ++ ++ K +K + T+I + R
Sbjct: 126 KFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGR 185
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM-----QRFGIEPDE 291
P++ + + G P++ +FN + LV +R L+ LM ++FGI P+
Sbjct: 186 PKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF----DLVHLMFKNCRKKFGIVPNV 241
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
T N+++K C+ +D A +V M +PN Y T++ +GD A + +
Sbjct: 242 FTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGE 301
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + WVP T + L++G K + A +M
Sbjct: 302 ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVM 334
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 138/287 (48%), Gaps = 3/287 (1%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
E DP ++FK+ F ++ A F +E +L+ K + E
Sbjct: 67 EPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEK 126
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHL-YGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
+ I YGKA + + A+D F M + CKRT KS N+ L V+ + F
Sbjct: 127 CFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNH 186
Query: 176 V--PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
V + I ++ +FN+VIKA C++G++D A V +M +PDV TY TL+ K
Sbjct: 187 VIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCK 246
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+R + L + M GCFP+ TFNV I L K +A KL+ M G P+EVT
Sbjct: 247 ADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVT 306
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
YN +I G C G L+ A + M+ + +PN Y T+I+ L ++G
Sbjct: 307 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQG 353
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 11/250 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD- 185
K G++ A+ F DM + C+ V + + L ++ + + L E +Q D
Sbjct: 211 KVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE------MQIDG 264
Query: 186 ----IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+FN++I C+ G L +A ++ M G P+ +TY TLI + E
Sbjct: 265 CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAI 324
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV C PN+ T+ I LV + R+ ++ LM+ G +E Y+ +I G
Sbjct: 325 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGL 384
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+ G A ++ M + N +Y +I LC++G + A + + K P+
Sbjct: 385 FKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNA 444
Query: 362 DTISALLEGL 371
T S+L++G
Sbjct: 445 YTCSSLMKGF 454
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA I A+ +M + GC + + N + L + DL + + K I ++
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEV 305
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C G L+KA ++ M P+V+TY T+I+ K R G + L
Sbjct: 306 -TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLAL 364
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N ++ I L + +S +A L M G E + + Y+ VI G CR G
Sbjct: 365 MEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGK 424
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A +V S M + PN +++ + G+ + A + KD K N+ + S
Sbjct: 425 PDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSV 484
Query: 367 LLEGLKKNNQ 376
L+ GL K+ +
Sbjct: 485 LIHGLCKDGK 494
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++ +I + G +A + EM G + + I Y+ +I +D +P+ + +
Sbjct: 375 YVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSE 434
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGC PN T + ++ S +A ++ M + +EV Y+++I G C+ G
Sbjct: 435 MTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGK 494
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ A V++ MLG+ P+ Y +MI+ L G
Sbjct: 495 VKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAG 528
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFD 185
K G +K AM + M GCK V + ++ + L+ + ++ A+Q + + + Q D
Sbjct: 491 KDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPD 550
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLW 244
+ ++NI++ C+ + +A ++ M G PD++T T + K + P+ G
Sbjct: 551 VVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFL 610
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ +V + L+ ++R A+K++ +M + + P T+ V++ C+
Sbjct: 611 DELVVR---------------LLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCK 654
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM--QKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
D+ +++ +I G+++ A + EM Q +PDV+TY L++ K +
Sbjct: 513 DVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAID 572
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L N M+ +GC P+L T + ++ L K Q + E LV++
Sbjct: 573 LLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGR-------------EFLDELVVRLLK 619
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
R L A K+ ML + L P + ++ LC+
Sbjct: 620 RQRVLG-ASKIVEVMLQKLLPPKHSTWARVVENLCK 654
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 18/353 (5%)
Query: 33 NKFPNREPLVDKPLEPPA------------LVKLKAERDPEKLFQLFKANAHNRIVIENK 80
+ F R P + EPP L LK+ +DP+ LF N + ++ ++
Sbjct: 64 HTFRPRRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLF--NQYQQMGFKHD 121
Query: 81 Y-AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
Y ++ V +LA +R F+ +E LL++ +++ RE + ++ YGK+ M + A++ F
Sbjct: 122 YPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAVELFQ 181
Query: 140 DMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M + C RT+ S N L VL E+ R L AI F + K + + SFNI+IK +
Sbjct: 182 RMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIF--DRSTKMGFRRNSISFNIIIKGWLG 239
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G DKA+ V EM VKP V+T+ +LI + GL M+ K PN T
Sbjct: 240 KGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVT 299
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ + ++ L + + +A K+M M G +P + + +++ R G +D +K + M
Sbjct: 300 YALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMK 359
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
RR P+ Y +I++LC+EG AY + + P+ T +++G
Sbjct: 360 RRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGF 412
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 14/316 (4%)
Query: 60 PEKLFQLFKA----NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
PEK +LF+ N H +V +F ++ L RF ++ + +S G R
Sbjct: 173 PEKAVELFQRMPSFNCHRTLV-----SFNTLLNVLVENDRF--LDAIGIFDRSTKMGFRR 225
Query: 116 GFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
I +++ G G A F +M K TV + N+ + L DL L
Sbjct: 226 NSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLL 285
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
++ +K H + + ++ ++++ C +G +A +M +M G KP ++ + L+S +
Sbjct: 286 EDMIQKRH-RPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGR 344
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
R + L M + P++ T+N+ I HL + R+ +A K++ MQ G EP+ T
Sbjct: 345 RGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAAT 404
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y +++ GFC+ + KV SAML P + + ++ L + G + A + ++
Sbjct: 405 YRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEME 464
Query: 354 KKNWVPSVDTISALLE 369
K+ ++ AL++
Sbjct: 465 KRKMRFHLEAWEALVK 480
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+ F G K S +A + L SR+ +A++ L++ + +I+ F +I
Sbjct: 106 ALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVET-LLDYLQNINIRCRETLFIALI 164
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ + + + +KA + M ++++ TL++ +++R G+++ G
Sbjct: 165 QHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFR 224
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
N +FN+ I+ + K +A ++ M ++P VT+N +I C G LD A +
Sbjct: 225 RNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGL 284
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ +R PN Y ++ LC G + A M D + P + L+ L +
Sbjct: 285 LEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGR 344
Query: 374 NNQPCKANTIMALVQRR 390
+ + T++ ++RR
Sbjct: 345 RGRIDDSKTLLLEMKRR 361
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 37/336 (11%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKS-LPQGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
+ ++ + +L +F+ +E+LL +S L EG + M YG+ G I+ A+DTF
Sbjct: 120 FTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFE 179
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M L+ C +V S NA + +L E M + +K ++ D++++ I IK+FC
Sbjct: 180 RMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK-KVESDVYTYTIRIKSFCRT 238
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----DNRPEIGNGLWNLMVC------ 249
G A ++ M LG + + Y T+++ FY+ D E+ + + +C
Sbjct: 239 GRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTF 298
Query: 250 -------------------------KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+G PNL TFN+ IQ L + +A +L+G + R
Sbjct: 299 NKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR 358
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD VTYN VI G CR + A++ M+ PN Y ++I C++G
Sbjct: 359 EGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVD 418
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
A + KD++ K + P T +L+ G ++ P +A
Sbjct: 419 ANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 454
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 148/325 (45%), Gaps = 40/325 (12%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+ L +G R I+ ++ G + G+I A+ +M GCK + + N + L +
Sbjct: 459 KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
L + + K I DIF++N ++ +C LD A ++ M G+ PDVIT
Sbjct: 519 GCLSDANHLIGDAITKGCIP-DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y TL++ K + E ++ M KGC PN+ T+N I+ L N ++ +A L+G M+
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLD----------------------------------- 308
G+ PD V++ +I GFC+ G LD
Sbjct: 638 SKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNM 697
Query: 309 -MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
MA +++S M P+ Y+ +I C+ G+ N Y ++++K ++PS+ T +
Sbjct: 698 KMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRV 757
Query: 368 LEGLKKNNQPCKANTIMAL-VQRRV 391
L L ++ +A I+ L VQ+ +
Sbjct: 758 LNCLCVEHKVQEAVGIIHLMVQKDI 782
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N +I +C+ G++ A ++ + G KPD TY +L++ F +D P+ ++
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P++ +N I+ L + A +LM M G +PD TYNL+I G C+ G
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A + + + +P+ Y T++ C++ + A + + P V T +
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
LL GL K K+ +M + + + + + +I+
Sbjct: 581 LLNGLCKT---AKSEEVMEIFKAMTEKGCAPNIITYNTII 617
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I++ C +++A ++ EM+ G+ PDV+++ TLI+ F K + GL+
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 668
Query: 245 NLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M + AT+N+ I + A +L M++ G +PD TY ++I GFC+
Sbjct: 669 RGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G+++ K + + +P+ + +++ LC E A + ++K+ VP DT
Sbjct: 729 TGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP--DT 786
Query: 364 ISALLEGLKKNN 375
++ + E KK +
Sbjct: 787 VNTIFEADKKGH 798
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 35/174 (20%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL---- 307
C P++ ++N + LV QA+K+ M+ +E D TY + IK FCR+G
Sbjct: 186 CDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAAL 245
Query: 308 -------------------------------DMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
D A++++ ML L P+ + ++H L
Sbjct: 246 RLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHAL 305
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C++G + + +K+ P++ T + ++GL K +A ++ V R
Sbjct: 306 CKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSRE 359
>gi|210077735|gb|ACJ07056.1| putative membrane-associated salt-inducible protein [Triticum
urartu]
Length = 289
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 6/242 (2%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
++L+G+AG++ A+ TF + +SLNA L + + P+
Sbjct: 54 IVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHTEAARIFQTFPDAHR 107
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + +FN +IK+F E G Y V EM K GVKP T+T I+ FYK+ R +
Sbjct: 108 VKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVE 167
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ LM C +L +N R+Q L R+ A L+ M + G +P+ VTYN +I GF
Sbjct: 168 KVIKLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGF 227
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L+ AK++Y M + L+ + Y T+I +LC+ GDF+ A + + + +NWVP
Sbjct: 228 CKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPCF 287
Query: 362 DT 363
T
Sbjct: 288 ST 289
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 182/387 (47%), Gaps = 17/387 (4%)
Query: 9 RFCHTAAAAAADA---------IALNNIRAVSLNKFPNREPLVDKP--LEPPALVKLKA- 56
R TA AA D +A + ++ L + P+ P L P +V + +
Sbjct: 51 RSASTAVGAAVDPFTDHPSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISR 110
Query: 57 ERDPEKLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE--HQKSLPQGR 113
+++ + Q+F A +R N + + +L+ AR F+ +E L+ H+ + G
Sbjct: 111 QQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCG- 169
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
E + ++ YG AG K A+ TF + +G + +V+S N L L +++ +
Sbjct: 170 -ENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMF 228
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+KF I ++F+ NI++KA C+ +D A V+ EM +G P+V+TYTT++ +
Sbjct: 229 KNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVS 288
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
++ ++ +G P+ T+ + + K R A K+M M+ +EP++VT
Sbjct: 289 KGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVT 348
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++I+ +C+ + ML ++ +P+ + +I LC+EG +A + K +
Sbjct: 349 YGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLL 408
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKA 380
KKN P S L+ L K + +A
Sbjct: 409 KKNCTPDNAITSTLIHWLCKEGKVWEA 435
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 179 KFHIQF--DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
KFH F + ++ +I+ + + ++ ++ K +K + T+I + R
Sbjct: 126 KFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGR 185
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM-----QRFGIEPDE 291
P++ + + G P++ +FN + LV +R L+ LM ++FGI P+
Sbjct: 186 PKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF----DLVHLMFKNCRKKFGIVPNV 241
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
T N+++K C+ +D A +V M +PN Y T++ +GD A + +
Sbjct: 242 FTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGE 301
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + WVP T + L++G K + A +M
Sbjct: 302 ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVM 334
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 147/306 (48%), Gaps = 5/306 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIE 100
K + P + +L +AERD +K +F + + + F +S+L A +F E
Sbjct: 40 KTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAE 99
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
LL+ K E ++ I YG+ ++ F+ M + CK T KS + L +L
Sbjct: 100 TLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAIL 159
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE-MGILDKAYLVMVEMQKLGVKP 219
E LK+ F ++ K I + S N++IKAFC+ G +DKA + M G +P
Sbjct: 160 VEENQLKSAFRFYRDM-RKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEP 218
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D TY TLI+ + L M KGC P++ T+ I L +A +L+
Sbjct: 219 DSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLL 278
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M+ IEP+ TY+ ++ GFC++GH A+ + M+ +RL PN Y T+++ LC E
Sbjct: 279 EDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNE 338
Query: 340 GDFNLA 345
G N A
Sbjct: 339 GKINEA 344
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/263 (18%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A + +M GC +V + + + L + ++ L ++ +K +I+ ++F+++
Sbjct: 236 IVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDK-NIEPNVFTYS 294
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ FC+ G +A ++ M + ++P++I+Y+TL++ + + +++ M +
Sbjct: 295 SLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQ 354
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL-------VIKGFCR 303
G P+ + + L + R +A + M GI+P+ +T++L VI G C
Sbjct: 355 GFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCT 414
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ + A ++Y ++L R + + +++ C + D + + + +P +
Sbjct: 415 INNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEM 474
Query: 364 ISALLEGLKKNNQPCKANTIMAL 386
S ++ + C A ++ L
Sbjct: 475 WSTMVNCFCDERKACDAMKLLQL 497
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 18/353 (5%)
Query: 33 NKFPNREPLVDKPLEPPA------------LVKLKAERDPEKLFQLFKANAHNRIVIENK 80
+ F R P + EPP L LK+ +DP+ LF N + ++ ++
Sbjct: 426 HTFRPRRPTTESRREPPHRSTSRLRKRIPFLADLKSVQDPDDALSLF--NQYQQMGFKHD 483
Query: 81 Y-AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
Y ++ V +LA +R F+ +E LL++ +++ RE + ++ YGK+ M + A++ F
Sbjct: 484 YPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPEKAVELFQ 543
Query: 140 DMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M + C RT+ S N L VL E+ R L AI F + K + + SFNI+IK +
Sbjct: 544 RMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIF--DRSTKMGFRRNSISFNIIIKGWLG 601
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G DKA+ V EM VKP V+T+ +LI + GL M+ K PN T
Sbjct: 602 KGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVT 661
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ + ++ L + + +A K+M M G +P + + +++ R G +D +K + M
Sbjct: 662 YALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMK 721
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
RR P+ Y +I++LC+EG AY + + P+ T +++G
Sbjct: 722 RRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGF 774
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 14/302 (4%)
Query: 60 PEKLFQLFKA----NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE 115
PEK +LF+ N H +V +F ++ L RF ++ + +S G R
Sbjct: 535 PEKAVELFQRMPSFNCHRTLV-----SFNTLLNVLVENDRF--LDAIGIFDRSTKMGFRR 587
Query: 116 GFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
I +++ G G A F +M K TV + N+ + L DL L
Sbjct: 588 NSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLL 647
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
++ +K H + + ++ ++++ C +G +A +M +M G KP ++ + L+S +
Sbjct: 648 EDMIQKRH-RPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGR 706
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
R + L M + P++ T+N+ I HL + R+ +A K++ MQ G EP+ T
Sbjct: 707 RGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAAT 766
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y +++ GFC+ + KV SAML P + + ++ L + G + A + ++
Sbjct: 767 YRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEME 826
Query: 354 KK 355
K+
Sbjct: 827 KR 828
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+ F G K S +A + L SR+ +A++ L++ + +I+ F +I
Sbjct: 468 ALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVET-LLDYLQNINIRCRETLFIALI 526
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ + + + +KA + M ++++ TL++ +++R G+++ G
Sbjct: 527 QHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFR 586
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
N +FN+ I+ + K +A ++ M ++P VT+N +I C G LD A +
Sbjct: 587 RNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGL 646
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ +R PN Y ++ LC G + A M D + P + L+ L +
Sbjct: 647 LEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGR 706
Query: 374 NNQPCKANTIMALVQRR 390
+ + T++ ++RR
Sbjct: 707 RGRIDDSKTLLLEMKRR 723
>gi|226501132|ref|NP_001144243.1| hypothetical protein [Zea mays]
gi|195638968|gb|ACG38952.1| hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 173/348 (49%), Gaps = 17/348 (4%)
Query: 56 AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ-KSLPQGR- 113
A P+ L LF + + + ++ F +V RLA A R D + +L +LP
Sbjct: 53 AATTPDALATLFLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHP 112
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF 172
EGF++R++ LY AGM H++ F + + ++L+A L ++R + ++AF
Sbjct: 113 SEGFLLRLISLYSAAGMPDHSLAVFRLVK----PASDRALSALLSAYHDNRLYDRTVRAF 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAF 231
+P + I+ + S N+++KA G + A+ + EM GV+PD+++ ++ +
Sbjct: 169 -NTLPAELGIKPGLVSHNVLLKALVASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGY 227
Query: 232 YKDNRPEIGNGLWNLMVC--KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ + L + + PN+ T+N+R+ L +K RS++A +L+ +M G+ P
Sbjct: 228 LNAGDADAFDRLVKEIAGPKRRLKPNVGTYNLRMALLCSKMRSFEAEELLDVMGANGVPP 287
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMIHYLCQEGDFN 343
+ ++N VIKG C G + A ++ M G+ + PN + Y ++ L ++ F+
Sbjct: 288 NRTSFNTVIKGLCNEGEVGAAMALFKRMPEVPRQHGKGVSPNFETYIMLLEALVKKNLFD 347
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
A +CK+ ++ W P + L++GL K+ + A + +++ V
Sbjct: 348 PALEICKECLRNKWAPPFQAVKGLVQGLLKSRKAKHAREVFMAMRKAV 395
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 180/395 (45%), Gaps = 44/395 (11%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLLEHQK 107
P L LK+ +DP+ LF N + ++ ++ Y ++ V +LA +R F+ +E LL++ +
Sbjct: 383 PFLADLKSVQDPDDALSLF--NQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQ 440
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDL 166
++ RE + ++ YGK+ M + A++ F M + C RT+ S N L VL E R L
Sbjct: 441 NINIRCRETLFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFL 500
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
AI F + K + + SFNI+IK + G DKA+ V EM VKP V+T+ +
Sbjct: 501 DAIGIF--DRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNS 558
Query: 227 LIS-----------------AFYKDNRPE------IGNGLWNL------------MVCKG 251
LI K +RP + GL +L M +G
Sbjct: 559 LIGFLCGKGDLDGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQG 618
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P L F V + L + R L+ M+R +PD VTYN++I C+ G A
Sbjct: 619 CKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAY 678
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
KV M PN Y+ M+ CQ DF + + P +++ L+ GL
Sbjct: 679 KVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGL 738
Query: 372 KKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
KN + A ++ +++R F L A+++++
Sbjct: 739 LKNGKIDGACFVLEEMEKRKMRF---HLEAWEALV 770
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 156/332 (46%), Gaps = 26/332 (7%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGF-------------------IMRIMMLYG 126
T L AR +++ + L+H LP G F ++R+ +
Sbjct: 60 TTHILVRARMYNFAKTTLKHLLQLPIGLNSVFGALMETYPICNSNPAVFDLLIRVCL--- 116
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ M+ A+ TFY M G +V + N L L + + + +F + K I D+
Sbjct: 117 RNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAK-GICPDV 175
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ A CE G A ++ +M++ GV P +TY TL++ + K R + + L +
Sbjct: 176 ATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDC 235
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG ++ T+NV I +L RS + L+ M+R + P+E+TYN +I GF R G
Sbjct: 236 MASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGK 295
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+++A KV+ M L+PN Y T+I C G+ A + + P+ T A
Sbjct: 296 IEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGA 355
Query: 367 LLEGLKKNNQPCKANTI---MALVQRRVPHFS 395
LL GL KN + ++I M + RV H S
Sbjct: 356 LLNGLYKNAEFGMVSSILERMRMGGVRVSHIS 387
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ N+++ FC G L++A M M ++G+ P+ +T+ +I+ + ++
Sbjct: 489 DHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G FP+L T+ ++ L +A K ++ D V +N + CRS
Sbjct: 549 DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRS 608
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G+L A + + M+ +P+ Y +I LC++G A ++ +++K + P+
Sbjct: 609 GNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAV 668
Query: 364 ISALLEGLKKNNQ 376
++L++GL K+
Sbjct: 669 YTSLVDGLLKHGH 681
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ +I C+ G+L++A ++ +M K+ V PDV+T++ LI+ F++ + + M
Sbjct: 387 SYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKM 446
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN ++ I + +A +M G D T N+++ FCR G L
Sbjct: 447 YKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKL 506
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A+ + M L PN + +I+ GD A+ + PS+ T L
Sbjct: 507 EEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGL 566
Query: 368 LEGL 371
L+GL
Sbjct: 567 LKGL 570
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 49/257 (19%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A+Q L++ K + D+ +F+++I F +G ++ A +M +M K G+ P+ I Y+T
Sbjct: 403 EAVQ--LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST 460
Query: 227 LI-----------------------------------SAFYKDNRPEIGNGLWNLMVCKG 251
LI + F + + E N M G
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG 520
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN TF+ I N + +A + M FG P TY ++KG C GH++ A
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEAL 580
Query: 312 KVYSAMLGRRLMPN---RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
K + + R +PN I+ T + C+ G+ + A + + + +++P T + L+
Sbjct: 581 KFFHRL---RCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637
Query: 369 EGLKKNNQPCKANTIMA 385
GL CK I+A
Sbjct: 638 AGL------CKKGKIVA 648
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A + M+ + V + NA L + D L + E + + +
Sbjct: 822 MKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNK-QYI 880
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW--NLMV 248
+I C +G + A + EM+ LG+ + + ++ N +I N +W +LM+
Sbjct: 881 TLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGL--ANSKKIENAIWVLDLML 938
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P +ATF + + +A +L +M+ ++ D V YN++I G C +G ++
Sbjct: 939 EMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIE 998
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
A K+Y M R L PN IY +I C
Sbjct: 999 AAFKLYEEMKQRDLWPNTSIYIVLIDSFC 1027
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 87/183 (47%)
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM V+PD + + +I + + + N + + M K NLAT+N+ +
Sbjct: 685 ALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLH 744
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + L M R G PD+ +++ +I G+C+S D+A K+ + +
Sbjct: 745 GYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVI 804
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+R + +I C+ + A+ + K + +P+VDT +AL GL + + KA+ ++
Sbjct: 805 DRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVL 864
Query: 385 ALV 387
++
Sbjct: 865 QVL 867
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F++ ++NI++ + + + + +++ +M + G PD ++ +LI + + ++ +
Sbjct: 734 FNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKI 793
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ +G + TFN+ I + +A +L+ M +F + P+ TYN + G R
Sbjct: 794 LRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIR 853
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ A +V +L +P K Y T+I+ +C+ G+ A + +D MK + S +
Sbjct: 854 TSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKL-QDEMKTLGISSHNV 912
Query: 364 -ISALLEGL 371
+SA++ GL
Sbjct: 913 AMSAIVRGL 921
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 22/226 (9%)
Query: 120 RIMMLYGKAGMIKHAM--DTF--YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
R MLY MI+H D F + + L C+ KS + A+K+L
Sbjct: 754 RCFMLY--KDMIRHGFLPDKFSWHSLILGYCQS--KSFDVAIKILRW------------- 796
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + H+ D F+FN++I FCE + KA+ ++ +M + V P+V TY L + + +
Sbjct: 797 ITLEGHV-IDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTS 855
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ + +++ G P + I + A KL M+ GI V +
Sbjct: 856 DFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMS 915
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+++G S ++ A V ML +++P + T++H C+E +
Sbjct: 916 AIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 149 TVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
TV + + V E+ KA++ L + E H++ D+ ++N++I C G ++ A+
Sbjct: 945 TVATFTTLMHVYCKEANVAKALE--LRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFK 1002
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ EM++ + P+ Y LI +F N
Sbjct: 1003 LYEEMKQRDLWPNTSIYIVLIDSFCAGN 1030
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 111/262 (42%), Gaps = 13/262 (4%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIV--IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
+ K + +K F+L K ++ ++ A + + R + + + +L S
Sbjct: 813 ITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS 872
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
+P ++ ++ M + G IK AM +M G +++A ++ L S+ ++
Sbjct: 873 VPTNKQYITLINGMC---RVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIEN 929
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+++++ + I + +F ++ +C+ + KA + M+ VK DV+ Y LI
Sbjct: 930 -AIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLI 988
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
S + E L+ M + +PN + + V I ++ KL+ +Q +
Sbjct: 989 SGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQ----D 1044
Query: 289 PDEVTYNLVIKGFCRSGHLDMA 310
+ + N + FC S D+A
Sbjct: 1045 RELMRLN---QQFCYSSRCDIA 1063
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 163/321 (50%), Gaps = 16/321 (4%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIK 132
+ N + + + L + D LLE + +P F++ + KA
Sbjct: 55 ITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALC---KARNTA 111
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+D F M C++ V + + L ++ L + ++ +K + + +++N++
Sbjct: 112 KALDYFRSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNE-WTYNVL 167
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I FC++ + +AYL++ EM++ G+ P+V+TY+T+I F + + + L+ MV GC
Sbjct: 168 INGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGC 227
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PNL T+N + L +A +L+ M+ G++PD+ +Y+ ++ G C++G +DMA K
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 287
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK--DSMKKNWV-PSVDTISALLE 369
V+ P+ Y T+I LC+ G + A CK + M++N P V T +AL++
Sbjct: 288 VFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEA---CKLFEKMRENSCEPDVVTFTALMD 344
Query: 370 GLKKNNQPCKANTIMALVQRR 390
GL K ++ +A ++ ++ R
Sbjct: 345 GLCKGDRLQEAQQVLETMEDR 365
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A F M C+ V + A + L + L+ Q L E E + ++
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL-ETMEDRNCTPNV 371
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C+ G + A V M G++P+V+TY +LI F N + L
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC P++ T+N I L R+ +AN+L G M+ PD +TY+ +I GFC+
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+DMA+ ++ ML + ++P+ + T++ C G + A + ++ + + P V T ++
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L++G K + +A ++ + +R
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKR 575
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F M GC + + N L L + + L E+ E+ +Q D FS++
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER-GLQPDKFSYD 270
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ G +D A V + PDV+ Y+TLI+ K R + L+ M
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P++ TF + L R +A +++ M+ P+ +TY+ +I G C++G + A
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++V+ M+ R + PN Y ++IH C + A ++ ++ +P + T + L++G
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450
Query: 371 LKKNNQPCKANTIMA 385
L K + +AN +
Sbjct: 451 LCKTGRAPEANRLFG 465
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 1/296 (0%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
A+ ++ L A R D L E + +M K ++ A M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
C V + ++ + L ++ ++ Q + + I+ ++ ++N +I FC
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR-GIEPNVVTYNSLIHGFCMTNG 421
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A L+M EM G PD+ITY TLI K R N L+ M K C P++ T++
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I R A L M + + PD VT++ +++G+C +G +D A+++ M+
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
P+ Y +++ C+ G A + K K+ P+V T +AL++ + +P
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + F M + G + V + N+ + + + + LME DI
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS-ALLLMEEMTATGCLPDI 441
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ G +A + +M+ PDVITY+ LI F K R ++ L++
Sbjct: 442 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 501
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + P++ TF+ ++ N A +L+ M PD TY ++ GFC+ G
Sbjct: 502 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 561
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A++V M R PN Y +I C+ G +AY + ++ + P+V T +
Sbjct: 562 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRS 621
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L+ G +A I+ ++R
Sbjct: 622 LIGGFCGTGDLEEARKILERLER 644
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I C+ G LD+A + +M++ +PDV+T+T L+ K +R + +
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C PN+ T++ I L + A ++ M GIEP+ VTYN +I GFC +
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A + M +P+ Y T+I LC+ G A + D K P V T
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479
Query: 365 SALLEGLKK 373
S L+ G K
Sbjct: 480 SCLIGGFCK 488
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ ++ FC++G + +A V+ M K G +P+V+TYT LI AF + +P + L
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR-FGIEPDEVTYNLVIKGFCR 303
MV G PN+ T+ I +A K++ ++R + D Y +++ G CR
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCR 664
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSVD 362
+G + A ++ A+ P IY +I LCQ + A + ++ ++ + P+ +
Sbjct: 665 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 724
Query: 363 TISALLEGLKKNNQPCKANTI 383
A+++ L + + +AN +
Sbjct: 725 AYEAVIQELAREGRHEEANAL 745
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----------- 233
+++++N + +A +D+ ++ G+ P+V TY +I K
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 234 ----DNRPEIGNGLWNLMV---CKG--------------CFPNLATFNVRIQHLVNKRRS 272
++ P ++N ++ CK C N+ T+ + I L R
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A M++ G P+E TYN++I GFC+ + A + M L PN Y T+
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
IH C++ + AY + + ++ +P++ T + LL GL +N
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N+ T+N + L+ RR + ++ GI P+ TY +VI+G C+SG LD A ++
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDF--NLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
M +P+ IY +IH LC+ + L Y + K +V T + +++GL
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK-----NVITWTIMIDGLC 137
Query: 373 KNNQPCKANTIMALVQRR--VPH 393
K N+ +A T A ++++ VP+
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPN 160
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 45/232 (19%)
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPE-----IGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ G +V TY L A + R + + NG W G PN+ T+ V IQ L
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNG-WP----PGITPNVFTYAVVIQGLC 70
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK---------------------------- 299
+A +L+ M+ G PD YN VI
Sbjct: 71 KSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWT 130
Query: 300 ----GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
G C++ L A ++ M + +PN Y +I+ C+ + AY++ K+ +
Sbjct: 131 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
P+V T S ++ G + K +T L ++ V + L + ++LS
Sbjct: 191 GLAPNVVTYSTVIHGFCRQT---KVDTAYKLFRQMVENGCMPNLVTYNTLLS 239
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 165/346 (47%), Gaps = 13/346 (3%)
Query: 45 PLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL- 103
P A+VK++ DP K ++F + ++ V +L F+ +E LL
Sbjct: 7 PKHVAAVVKIQT--DPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLS 64
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
E ++++ EG + M YG+ G ++ A+DTF M Y C +V S NA + +L E
Sbjct: 65 EMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEF 124
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
M + ++ +Q D++++ I IK+FC+ A ++ M +LG + +
Sbjct: 125 GYHNQAHKVYMRMRDR-GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVA 183
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y T+++ Y + L++ M+ + P++ FN + L K +++ +L+G +
Sbjct: 184 YCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVL 243
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMA---KKVYSA------MLGRRLMPNRKIYQTMIH 334
+ G+ P+ T+N+ ++G CR G LD A +V A M+ P+ Y ++I
Sbjct: 244 KRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
C++G A + KD++ K + P T +L+ G K+ P +A
Sbjct: 304 GYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRA 349
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 152/342 (44%), Gaps = 41/342 (11%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+ L +G R ++ ++ G + G+I A+ +M GC + + N + L +
Sbjct: 354 KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM 413
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ + + K DIF++N +I +C+ LD A ++ M G+ PDVIT
Sbjct: 414 GCVSDASHLVDDAIAK-GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVIT 472
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y TL++ K + E ++ M KGC PN+ T+N+ + L ++ +A L+G M+
Sbjct: 473 YNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMK 532
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLD----------------------------------- 308
G++PD V++ + GFC+ G +D
Sbjct: 533 SKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNM 592
Query: 309 -MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
MA K++S M P+ Y+ +I C+ G+ Y ++M+K ++PS+ T +
Sbjct: 593 NMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRV 652
Query: 368 LEGLKKNNQPCKANTIMALVQRR--VPHFSSNQLSAFKSILS 407
L L ++ +A I+ L+ ++ VP + A K +++
Sbjct: 653 LNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFEADKKVVA 694
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I +C+ G++ A V+ + G KPD TY +LI+ F KD P+ ++
Sbjct: 294 DDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVF 353
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P++ +N I+ L + A +LM M G P+ TYNLVI G C+
Sbjct: 354 KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM 413
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + + + P+ Y T+I C++ + A M + P V T
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473
Query: 365 SALLEGLKK 373
+ LL GL K
Sbjct: 474 NTLLNGLCK 482
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
F + A + F+ +E +L + + E + YGKA + A++ FY M
Sbjct: 74 TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133
Query: 142 HL-YGCKRTVKSLNAALKVLTESR-DLKAIQAFLMEVPEK-FHIQFDIFSFNIVIKAFCE 198
+ CK TVKS N+ L V+ ++ +A++ + V K +I ++ SFN++IK+ C+
Sbjct: 134 SFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+G++D A + EM PD TY TL+ K +R + L + M +GCFP+ AT
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FNV I L K + KL+ M G P+EVTYN +I G C G LD A + M+
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313
Query: 319 GRRLMPNRKIYQTMIHYLCQEG 340
+ +PN Y T+I+ L ++G
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQG 335
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K I A+ +M + GC + + N + L + D + + + K + ++
Sbjct: 228 KVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEV 287
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C G LDKA ++ M P+ +TY T+I+ K R G + L
Sbjct: 288 -TYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVL 346
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N ++V + L + +S +A +L G + + V Y+ ++ G CR
Sbjct: 347 MEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRK 406
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A K+ S M + PN + +++ + G+ + A + KD K N + S
Sbjct: 407 PDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSV 466
Query: 367 LLEGLKKNNQPCKANTIMA 385
L+ GL K+ + +A + A
Sbjct: 467 LIHGLCKDGKVMEAMMVWA 485
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
K G++ +A++ F +M + C + + L + + + L M++ F
Sbjct: 193 KLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFP--- 249
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+FN++I C+ G + ++ M G P+ +TY TLI + + L
Sbjct: 250 SPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 309
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV C PN T+ I LV + R+ +++ LM+ G +E Y++++ G +
Sbjct: 310 DRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKE 369
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A +++ + + N +Y ++ LC++ + A + + K P+ T
Sbjct: 370 GKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTF 429
Query: 365 SALLEGL 371
S+L++G
Sbjct: 430 SSLMKGF 436
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +++++ + G ++A + E G K + + Y+ L+ +D +P+ + +
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSE 416
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGC PN TF+ ++ S +A ++ M + +EV Y+++I G C+ G
Sbjct: 417 MTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGK 476
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD--SMKKNWVPSVDTI 364
+ A V++ ML P+ Y +MI LC G A + + ++ + P V T
Sbjct: 477 VMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITY 536
Query: 365 SALLEGLKKNNQPCKA 380
+ L L K + +A
Sbjct: 537 NILFNALCKQSSISRA 552
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--GVKPDVITYTTLISAFYKDNRPEIGNG 242
D+ +++ +I+ C+ G +++A + EM L +PDVITY L +A K +
Sbjct: 495 DVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVD 554
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L N M+ +GC P+L T N+ ++ L K Q +F E LV++
Sbjct: 555 LLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDG------AKFLDE-------LVVRLLK 601
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
R +L A K+ ML + L P + ++H LCQ
Sbjct: 602 RQRNLG-ASKIVEVMLQKFLSPKASTWARVVHELCQ 636
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES----RDLKAIQAFLMEVPEKFHI 182
K G + AM + M GC+ V + ++ ++ L ++ LK L P+
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDS--- 529
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGN 241
Q D+ ++NI+ A C+ + +A ++ M G PD++T + K + P+ G
Sbjct: 530 QPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGA 589
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ +V + L+ ++R+ A+K++ +M + + P T+ V+
Sbjct: 590 KFLDELVVR---------------LLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHEL 634
Query: 302 CR 303
C+
Sbjct: 635 CQ 636
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 46 LEPPALVK-----LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
+ PP L K +K ++DP K ++F + + + +L +F+ +E
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 101 HLL-EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
+L + ++++ EG + M YG+ G ++ A++ F M Y C+ TV S NA + V
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L +S M + ++ I D++SF I +K+FC+ A ++ M G +
Sbjct: 121 LVDSGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+V+ Y T++ FY++N G L+ M+ G L+TFN ++ L K + KL+
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ + G+ P+ TYNL I+G C+ G LD A ++ ++ + P+ Y +I+ LC+
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
F A + + + P T + L+ G K
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 36/223 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DIF+FNI+I + ++ A ++ M GV PDV TY +L++ K ++ E +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KGC PNL TFN+ ++ L R+ +A L+ M+ + PD VT+ +I GFC++
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 305 GHLD------------------------------------MAKKVYSAMLGRRLMPNRKI 328
G LD MA+K++ M+ R L P+
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y+ M+ C+ G+ NL Y + M+ ++PS+ T+ ++ L
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
+ F M G + + N L+VL + D+K + L +V ++ + ++F++N+
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVLPNLFTYNLF 257
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C+ G LD A ++ + + G KPDVITY LI K+++ + MV +G
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+N I A +++G G PD+ TY +I G C G + A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ LG+ + PN +Y T+I L +G A + + +K +P V T + L+ GL
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 373 K 373
K
Sbjct: 438 K 438
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ +N +IK G++ +A + EM + G+ P+V T+ L++ K +
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL +M+ KG FP++ TFN+ I + + A +++ +M G++PD TYN ++ G
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ + + Y M+ + PN + ++ LC+ + A + ++ K+ P
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T L++G KN A T+
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTL 588
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+FNI++++ C LD+A ++ EM+ V PD +T+ TLI F K+ + L+
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 245 NLMV-CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M + T+N+ I K A KL M + PD TY L++ GFC+
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVD 362
+G++++ K M+ +P+ +I+ LC E A + ++K VP +V+
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Query: 363 TI 364
TI
Sbjct: 710 TI 711
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
DL ++ E + + ++NI+I AF E + A + EM + PD TY
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
++ F K +G M+ G P+L T I L + R ++A ++ M +
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 285 FGIEPDEV 292
G+ P+ V
Sbjct: 701 KGLVPEAV 708
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 3/287 (1%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
E DP ++FK+ F + A F +E +L+ + + E
Sbjct: 37 EHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEK 96
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLM 174
+ I YGKA + + A+ F M + + CKRTVKS N+ L V+ E +A++ +
Sbjct: 97 CFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNH 156
Query: 175 EVPEK-FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ K +I ++ +FN+VIK C++G++D A + +M +PDV TY TL+ K
Sbjct: 157 VIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCK 216
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+R + L + M GCFP+ TFNV I L K + KL+ M G P+EVT
Sbjct: 217 ADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVT 276
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
YN +I G C G L+ A + M+ + +PN Y T+I+ L ++G
Sbjct: 277 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQG 323
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA I A+ +M + GC + + N + L + DL + + + K ++
Sbjct: 216 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEV 275
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C G L+KA ++ M P+V+TY T+I+ K R G + L
Sbjct: 276 -TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLAL 334
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N ++ I L + +S +A +L M E + + Y+ VI G CR G
Sbjct: 335 MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGK 394
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A +V S M R PN Y +++ + G+ + A M KD K N+ + S
Sbjct: 395 PDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSV 454
Query: 367 LLEGLKKNNQPCKANTIMA 385
L+ GL K+ + +A + A
Sbjct: 455 LIHGLCKDGKVKEAMMVWA 473
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
++ + R L + + +H+ ++S +I + G +A + EM +
Sbjct: 319 LVKQGRALDGARVLALMEERGYHVNEYVYS--ALISGLFKEGKSQEAMQLFKEMTVKECE 376
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
+ I Y+ +I +D +P+ + + M C PN T++ ++ +A ++
Sbjct: 377 LNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEM 436
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M + +EV Y+++I G C+ G + A V++ MLG+ P+ Y +MI+ L
Sbjct: 437 WKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSN 496
Query: 339 EGDFNLAY-----IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
G A ++C++ + P V T + LL L K + +A
Sbjct: 497 AGLVEDALQLYNEMLCQEPDSQ---PDVVTYNILLNALCKQSSISRA 540
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFD 185
K G +K AM + M GCK V + + + L+ + ++ A+Q + + ++ Q D
Sbjct: 461 KDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPD 520
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLW 244
+ ++NI++ A C+ + +A ++ M G PD++T + K + P+ G
Sbjct: 521 VVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFL 580
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +V + L+ ++R A+K++ +M + + P T+ V++ C
Sbjct: 581 DGLVVR---------------LLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNP 625
Query: 305 GHLDMA-KKVYSAM 317
+ A +K +S +
Sbjct: 626 KKVQAAIQKCWSIL 639
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM--QKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
D+ ++ +I G+++ A + EM Q+ +PDV+TY L++A K +
Sbjct: 483 DVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAID 542
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L N M+ +GC P+L T + ++ L K Q + E LV++
Sbjct: 543 LLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGR-------------EFLDGLVVRLLK 589
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
R L A K+ ML + L P + ++ LC
Sbjct: 590 RQRVLG-ASKIVEVMLQKLLPPKPSTWTRVVEDLC 623
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 151/338 (44%), Gaps = 22/338 (6%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+ + DPE ++ + + +E+ V +L A FD +E L+
Sbjct: 60 LAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREM---- 115
Query: 111 QGRREGFIMRIMML------YGKAGMIKHAMDTF---YDMHLYGCKRTVKSLNAALKVLT 161
RREG +R +++ Y + A+D D +G + N L VL
Sbjct: 116 --RREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLV 173
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E LK +++ E+ + IQ D+ + N +IKA C + A L++ EM GV PD
Sbjct: 174 EGSKLKLLESVYNEMTGR-GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDE 232
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
T+TTL+ F ++ E + M+ GC P T NV I R A +G
Sbjct: 233 TTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDA---LGY 289
Query: 282 MQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+Q+ G EPD+VTYN + G C++GH+ A KV ML P+ Y T+I+ L +
Sbjct: 290 IQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 349
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
G+ + A + + + +P T + L+ L N+
Sbjct: 350 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 5/274 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+LE S E +M + + G I+ A+ M GC T ++N +
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYC 278
Query: 162 E-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ R A+ E+ + F + D ++N + C+ G + A VM M + G PD
Sbjct: 279 KMGRVEDALGYIQQEIADGF--EPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY T+I+ K+ + G+ N MV +GC P+ TFN I L ++ R +A L
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G+ PD T+N++I C+ G + +++ M P+ Y +I +LC G
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456
Query: 341 DFNLAYIMCKDSMKKNWVP-SVDTISALLEGLKK 373
A + + M+ N P S T + +++ L K
Sbjct: 457 KLGNALDLLNE-MESNGCPRSTVTYNTIIDALCK 489
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + HA+ M G V + N + L+++ +L + + ++ ++ + D +
Sbjct: 316 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP-DTTT 374
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I A L++A + E+ G+ PDV T+ LI+A K P +G L+ M
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P+ T+N+ I HL + + A L+ M+ G VTYN +I C+ ++
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A++V+ M + + + + T+I LC+ + A + + +K+ P+ T +++L
Sbjct: 495 EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554
Query: 369 EGLKKNNQPCKANTIM 384
K KA I+
Sbjct: 555 THYCKQGNIKKAADIL 570
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D ++ + G V + N + L + D + L E + D ++N
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGD-PHLGIRLFEEMKSSGCTPDEVTYN 446
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I C MG L A ++ EM+ G +TY T+I A K R E +++ M +
Sbjct: 447 ILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ 506
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G + TFN I L +R A +L+ M + G++P+ +TYN ++ +C+ G++ A
Sbjct: 507 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKA 566
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M + Y T+I+ LC+ G +A + + K P+ + +++
Sbjct: 567 ADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQS 626
Query: 371 L-KKNN 375
L ++NN
Sbjct: 627 LFRRNN 632
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I A C+ +++A V +M G+ +T+ TLI K R + L M
Sbjct: 479 TYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 538
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +G PN T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 539 VKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 598
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A K+ M + + P K Y +I L + + A + ++ + P T +
Sbjct: 599 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIV 658
Query: 368 LEGLKKNNQPCKA--NTIMALVQRR-VPHFSS 396
L + P K + ++ +V + +P FSS
Sbjct: 659 FRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSS 690
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ A + F M G R+ + N + L +++ + L+E K +Q + ++N
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE-LIEQMVKEGLQPNNITYN 551
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ +C+ G + KA ++ M G + DV+TY TLI+ K R ++ L M K
Sbjct: 552 SILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 611
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
G P +N IQ L + A L M G PD +TY +V + CR G
Sbjct: 612 GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 191 IVIKAFCE----MGILDKAY---LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+V+++F E + D A L ++ GV+ D + + L++ + ++ ++ +
Sbjct: 125 VVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M +G P++ T N I+ L + A ++ M G+ PDE T+ +++GF
Sbjct: 185 YNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ A +V + M+ P +I+ C+ G A + + + P T
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVT 304
Query: 364 ISALLEGLKKNNQPCKANTIMALV 387
+ + GL +N A +M L+
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLM 328
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 170/384 (44%), Gaps = 45/384 (11%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLF-----KANAHNRIVIENKYAFEDTVSRLAGARRFD 97
KP+ P L L + ++DP QLF ++ + + +++ +S+L A+ FD
Sbjct: 73 KPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKMFD 132
Query: 98 YIEHLLEHQKSLPQ-GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA 156
+E +L+ K + E ++ YG+A + A F + + CKRTVKS+N+
Sbjct: 133 EMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSL 192
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L L ++R L+ + +++ + D +FNI+I A C G LD + V EMQK G
Sbjct: 193 LAALLKNRQLEKMTQVFVDISN--YGSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRG 250
Query: 217 VKPDVIT------------------------------------YTTLISAFYKDNRPEIG 240
VKP+V+T YTTLI F
Sbjct: 251 VKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFA 310
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L MV A ++ I L R + + ++ M G +PD VTYN +I G
Sbjct: 311 FKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIING 370
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ L+ A +V M+ + P+ + T+I +LC+EG + A + +D ++ P
Sbjct: 371 HCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPD 430
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
V + + +GL + Q +A +I+
Sbjct: 431 VLSYRIIFDGLCEMMQLKEATSIL 454
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + F +M G K V + + L+ + LK ++ + + I+ +
Sbjct: 233 CGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNAS 292
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ +IK FC +G L+ A+ + EM VK Y+TLISA +K R E + + M
Sbjct: 293 IYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREM 352
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
GC P+ T+N I + A+++M M G +PD ++N +I C+ G L
Sbjct: 353 GENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKL 412
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A + M R P+ Y+ + LC+ A + + + K +VP ++I+ L
Sbjct: 413 DKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKL 472
Query: 368 LEGL 371
++ L
Sbjct: 473 VDRL 476
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I A + G ++ ++ EM + G KPD +TY +I+ K+N E + + + MV
Sbjct: 329 YSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMV 388
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC P++ +FN I L + + +A L+ M R G PD ++Y ++ G C L
Sbjct: 389 EKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLK 448
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M+ + +P + ++ LCQE + L + M +S+ + ++D + ++
Sbjct: 449 EATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLW-MILNSLGRGNRMNMDMWARVV 507
Query: 369 EGLKKNNQPCKANTIMALVQ 388
+ K N +N I +L+
Sbjct: 508 AFVYKENLSESSNLIDSLIS 527
>gi|326510149|dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 32/353 (9%)
Query: 46 LEPPALVKLK-----AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
+ P LV++K A P++L LF + + ++ F VSRL A R D +
Sbjct: 40 ISPAELVRIKNSIRSAATPPDELAALFLKGIPHTPFLGDRSIFSLAVSRLTAAARPDLVS 99
Query: 101 HLLEHQ-KSLPQGR-REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK 158
+L +LP EGF++R++ LY AGM H++ TF + + R + +L AA
Sbjct: 100 SVLSASLTALPAPHPSEGFLIRLIALYADAGMPTHSLSTFR-LVVPPSDRALSALLAAYH 158
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGV 217
+ +AIQAF ++ + I + S N+++K G + A V M K G+
Sbjct: 159 --DAGQPARAIQAF-RDLSAELSIAPGVVSHNVLLKCMVATGDVAGARQVFDGMPDKAGL 215
Query: 218 KPDVITYTTLISAFYKDNR--------PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+PD+++ ++ + K E+ G L PN+ T+ +R+ L K
Sbjct: 216 QPDIVSCNEMLKGYLKTGDYAAFDLLLKEVTGGKRRLK------PNVTTYKLRMSGLCAK 269
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLM 323
RS++A +L+ M G+ P+ +N VI G C+ G + A ++ M G+ +
Sbjct: 270 GRSFEAEELLEAMGANGVPPNRECFNTVIGGLCKEGEVGAAVALFKRMPEVPRPNGKGVS 329
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
PN + Y +I L + F A +CK+ + W P + L++GL K+ +
Sbjct: 330 PNFETYIMLIEALVENNAFVPALEVCKECLANKWAPPFQAVKGLIQGLVKSRK 382
>gi|242067098|ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 169/348 (48%), Gaps = 17/348 (4%)
Query: 56 AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ-KSLPQGR- 113
A P+ L LF + + + ++ F +V RLA A R D + +L +LP
Sbjct: 53 AATSPDALATLFLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHP 112
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF 172
EGF++R++ LY AGM H++ F ++ + ++L+A L ++R +A++AF
Sbjct: 113 SEGFLLRLISLYSAAGMPDHSLTVFRLVN----PPSDRALSALLSTYHDNRLYDRAVRAF 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAF 231
+P + I+ + S N+++KA G + A +M GV+PD+++ ++ +
Sbjct: 169 -NTLPAELGIKPGLVSHNVLLKALVASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGY 227
Query: 232 YKDNRPEIGNGLWNLMVC--KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ L + + PN+ T+N+R+ L +K RS++A +L+ M G+ P
Sbjct: 228 LSTGDDAAFDQLVKEIAGPNRRLKPNVGTYNLRMAMLCSKERSFEAEELLDAMGANGVPP 287
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMIHYLCQEGDFN 343
+ ++N VIKG C G + A ++ M G+ + PN + Y ++ L + F+
Sbjct: 288 NRASFNTVIKGLCNEGEVGAAMALFKRMPEVPRQKGKGVSPNFETYIMLLEALVNKNLFD 347
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
A +CK+ + W P + L+E L K+ + A ++ +++ V
Sbjct: 348 PALEVCKECLHNKWAPPFQAVKGLVESLLKSRKAKHAREVLMAMRKAV 395
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 135/241 (56%), Gaps = 2/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+++A DTF M YG TV+S NA L + + + + +F ++ + I ++++ N
Sbjct: 166 LRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQM-RRNRISPNVYTIN 224
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+V+ A+C++G L+KA V+ +M+ +G+ P+V+T+ +LIS + + + +LM+ K
Sbjct: 225 MVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGK 284
Query: 251 -GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G FPN+ TFN I + + +AN++ M+ + P+ VTYN +I GF ++G+ +M
Sbjct: 285 NGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEM 344
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
++ M ++ + Y +I LC+EG A M K+ K N VP+ T SAL+
Sbjct: 345 GIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIA 404
Query: 370 G 370
G
Sbjct: 405 G 405
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +FN +I FC+ G L +A V EM+ V P+V+TY TLI+ F + E+G GL+
Sbjct: 290 NVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLF 349
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M ++ T+N I L + ++ +A ++ + + + P+ T++ +I G C
Sbjct: 350 EEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVR 409
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ + A VY +M+ PN ++ + C+ DF+ A + +D +++ P +
Sbjct: 410 NNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSIL 469
Query: 365 SALLEGL 371
S + GL
Sbjct: 470 SEVYSGL 476
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF------------SFNIVIKAF 196
T+ + + L +LT++R+ K Q+ ++ F+ F+ + K F
Sbjct: 101 TLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSNLFESLLHSYTLCNSSPLVFDTLFKTF 160
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
M L A V+M++ G P V + +S+ RPE+ + M PN+
Sbjct: 161 AHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNV 220
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T N+ + +A++++ M+ G+ P+ VT+N +I G+C G L +A KV
Sbjct: 221 YTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDL 280
Query: 317 MLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+G+ + PN + T+I+ C+EG + A + + N P+V T + L+ G +
Sbjct: 281 MMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQ 338
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 154/336 (45%), Gaps = 3/336 (0%)
Query: 39 EPLVD-KPLEPPALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARR 95
EP V P+ P+ V+ + ++ DP ++F + + +F + +L AR+
Sbjct: 3 EPHVKPSPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQ 62
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
F ++ LL KS I+ +YG+A + A+ TF+ M + K K LN
Sbjct: 63 FSLMQDLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNX 122
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L++L R+ L + ++ + D S+NI++ AFC G L AY + +M K
Sbjct: 123 LLQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKR 182
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
V PDV +Y L+ + ++ L M+ KG P+ ++ + L K++ +A
Sbjct: 183 DVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEA 242
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
KL+ M+ G PD V YN VI GFCR G A KV M PN Y T++
Sbjct: 243 YKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSG 302
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC +G ++ A ++ + K + P AL+ G
Sbjct: 303 LCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGF 338
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 143/329 (43%), Gaps = 38/329 (11%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P ++K+ A RD + +F+ R ++ + + RLAGARRF +E LL
Sbjct: 36 LAPNEVLKIFASIRDAALITSVFRKACARRDYKPSEALYGLMIDRLAGARRFGDVEELLA 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
++ + F R++ +YG A + AM+T Y M YGC + K+ N L +L
Sbjct: 96 RARAERFRFSDDFFYRLIKMYGNVANHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCR 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + + P + ++ D FNI+IK C+ G ++A ++ EM K +P+ +T
Sbjct: 156 RQYEVVHEVYSSAP-RLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMT 214
Query: 224 YTT-----------------------------------LISAFYKDNRPEIGNGLWNLMV 248
Y+T L+S ++ R L+ M
Sbjct: 215 YSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMS 274
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+GC PN T+ V + LV + +A L+G+M + P +Y L+I GFC LD
Sbjct: 275 SQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAESLRPSFSSYKLLIDGFCSVNCLD 334
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
A V M+ + +P + ++ LC
Sbjct: 335 DAHHVLKQMVDQGFVPRMSTWTKLLTSLC 363
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 37/202 (18%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N PE M GC+P+ TFN + LV +R+ +++ R G+E D +
Sbjct: 121 NHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCF 180
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY------------------- 335
N++IKG C+ G + A + M + PN Y T++H+
Sbjct: 181 NILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRK 240
Query: 336 ----------------LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
LC+EG AY + K + P+ T LL+GL + +
Sbjct: 241 EEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVE 300
Query: 380 ANTIMALVQRRV--PHFSSNQL 399
A ++ ++ P FSS +L
Sbjct: 301 AKDLVGMMSAESLRPSFSSYKL 322
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 165/340 (48%), Gaps = 5/340 (1%)
Query: 46 LEPPALVKLKAERDPEKL-FQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLL 103
L P L+ + ++ L FQ+F + Y + + +L+ AR FD +E LL
Sbjct: 13 LYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLL 72
Query: 104 EHQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVL 160
+ G + ++ YG AG + A+ TF + + + +VK LN L V
Sbjct: 73 SQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVF 132
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+++ + + L +K+ + ++FSFNI+IKA C+ ++ A V EM +G+ P+
Sbjct: 133 VQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPN 192
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
++TYTT++ F +++ + KG P+ T+ V + + R A K+M
Sbjct: 193 LVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMD 252
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M+ G+EP+EVTY ++I +C+ A+ + ML ++ +P+ + +I LC++G
Sbjct: 253 NMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDG 312
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
A + K ++KN +P +S L+ L K + +A
Sbjct: 313 KVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEA 352
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 37/291 (12%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+++A+ F +M G + + L DL + E+ +K + D ++
Sbjct: 174 VENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLP-DATTYT 232
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----------------- 233
+++ +C+ G L A VM M+ GV+P+ +TY +I A+ K
Sbjct: 233 VLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDK 292
Query: 234 ------------------DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
D + E LW M+ K C P+ A + I L + + W+A
Sbjct: 293 KFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEA 352
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
KL ++ G P +TYN +I G C G L+ A +++ M+ +R PN Y +I
Sbjct: 353 RKLFDEFEQ-GTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKG 411
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ G + ++ + +P+ T + L+EGL+++ + +M++
Sbjct: 412 FMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSM 462
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 254 PNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ N + V NKR + L ++G+ P+ ++N++IK C+ ++ A K
Sbjct: 120 PSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALK 179
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V+ M ++PN Y T++ GD A + + K W+P T + L+ G
Sbjct: 180 VFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYC 239
Query: 373 KNNQPCKANTIM 384
K + A +M
Sbjct: 240 KQGRLSDAIKVM 251
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+ +I C+ G + +A + E ++ G P ++TY TLI+ + LW+ MV
Sbjct: 337 STLIHWLCKEGKVWEARKLFDEFEQ-GTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVE 395
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K C PN T+N+ I+ + + +++ M G P++ TY L+I+G SG
Sbjct: 396 KRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD 455
Query: 310 AKKVYSAMLGRR 321
KV S + R
Sbjct: 456 VDKVMSMAMASR 467
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I CE G L++A + +M + +P+ TY LI F K + G +
Sbjct: 367 LMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILE 426
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF---- 301
M+ GC PN +T+ + I+ L +K+M M E D +++L +
Sbjct: 427 EMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMS-MAMASREVDADSWDLFLHKIVGNL 485
Query: 302 -CRSGHLD 308
C +G LD
Sbjct: 486 DCGTGALD 493
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 126/239 (52%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+HA + M +G TV+S NA L L R AF E+ + + ++++ N+
Sbjct: 171 RHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNM 230
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+A+C +G + K + ++ +M +G+ P+V+++ TLIS + + + +LMV G
Sbjct: 231 IIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENG 290
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN+ TFN I +R+ +AN++ M+ ++P VTYN ++ G+ + G +M
Sbjct: 291 VQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGV 350
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+VY M+ L + Y +I LC++G A ++ K+N VP+ T SAL+ G
Sbjct: 351 RVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITG 409
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 98/190 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +FN +I FC+ L +A V EM+ V P V+TY TL++ + + E+G
Sbjct: 291 VQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGV 350
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M+ G ++ T+N I L ++ +A + + + + P+ T++ +I G
Sbjct: 351 RVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQ 410
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C + + A +Y +M+ PN + +Q +I C+ DF+ A + +D + + P +
Sbjct: 411 CVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDL 470
Query: 362 DTISALLEGL 371
T+S L +GL
Sbjct: 471 STMSELCDGL 480
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G+ A+ M G + V + N + + R L E+ + ++
Sbjct: 270 YCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEM-KVANVDP 328
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N ++ + ++G + V EM + G+K D++TY LI KD + + G
Sbjct: 329 SVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFV 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + PN +TF+ I + S +A + M R G P+ T+ ++I FC++
Sbjct: 389 RELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKN 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
D A +V MLGR + P+ + LC+ G LA +C + + +P
Sbjct: 449 EDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLP 503
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ DI ++N +I C+ G KA + E+ K + P+ T++ LI+ N E
Sbjct: 361 LKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAF 420
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ MV GC PN TF + I A +++ M + PD T + + G
Sbjct: 421 LIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGL 480
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPN 325
CR G +A + S M RRL+P+
Sbjct: 481 CRCGKNQLALALCSEMEVRRLLPD 504
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 27/239 (11%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--HIQFDIFSFNIVIKAFCEMGILDKAY 206
T+ + + L L++ R K Q FL + H FD F+
Sbjct: 102 TLDTHSILLHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLFSY--------------- 146
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+L + + +L N+ ++ LM G P + + N + L
Sbjct: 147 -------RLCNSSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSL 199
Query: 267 VNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ RR+ A + +R + P+ T N++I+ +C G + + M+ L PN
Sbjct: 200 LRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPN 259
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTI 383
+ T+I C +G F LA + K M +N V P+V T + L+ G K + +AN +
Sbjct: 260 VVSFNTLISGYCNKGLFGLA-LKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRV 317
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 2/329 (0%)
Query: 45 PLEPPALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
P+ P+ V+ + ++ DP ++F + + ++ + +L A+ F +I+ L
Sbjct: 63 PIGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDL 122
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
L KS I+ +YG+A + A+ FY + + C + K LN L++L
Sbjct: 123 LTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVS 182
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ L + + + + S+NI+I+AFC G + AY + +M K V PDV
Sbjct: 183 HQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVE 242
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+Y L+ A + ++ L M+ KG P+ ++ + L K++ +A KL+ M
Sbjct: 243 SYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRM 302
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G PD + YN VI GFCR G A KV M MPN Y+T++ LC +G F
Sbjct: 303 KVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMF 362
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A ++ M K + P +AL++G
Sbjct: 363 DEAKSHLEEMMMKGFSPHFAVSNALIKGF 391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 4/234 (1%)
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P + ++R L G+ M A F M V+S ++ L +
Sbjct: 203 FPNTKSYNILIRAFCLNGQISM---AYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNG 259
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
L ++ K ++ D S+ ++ + C L +AY ++ M+ G PD+I Y T+I
Sbjct: 260 AVDLLEDMLNKGYVP-DALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVI 318
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
F ++ R + M GC PNL ++ + L ++ +A + M G
Sbjct: 319 LGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFS 378
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
P N +IKGFC G ++ A V +L P+ + + M+ +C+ D
Sbjct: 379 PHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDL 432
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 9/300 (3%)
Query: 76 VIENKYAFEDTVSRLAGARRFDY---IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
++ N + ++ L RF I H +E SL + I++ + L G I+
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL---GGDIE 467
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
AM F M G TV + N + LT+ A A L+++ ++ + D +++N
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA--ARLLDLMKENGCEPDEWTYNE 525
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ F + G L+ A EM + G+ P+ ++YTTLI KD + +I L M G
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C PN+ ++N I L + R +A K+ M G+ P+ +TY +I G CR+G A
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAF 645
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K++ M R+ +PN Y ++I+ LCQEG + A I+ K+ +K P T ++L++G
Sbjct: 646 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ K M++ A + + M G + ++ + N + +L++ ++ + L ++ + +
Sbjct: 211 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-Y 269
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+F++ +I C LD A+ V M K G P+ +TY+TLI+ + R +
Sbjct: 270 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 329
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M+ KG P + T+ + I L +A +L+ M++ G P+ TY +I G
Sbjct: 330 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 389
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
R G L++A +Y ML L+PN Y +I+ LC G F+ A
Sbjct: 390 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G A+ F+ M +G ++ N +K L D++ L E K +
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV-LFEKMLKMGPLPTVV 486
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I + G ++ A ++ M++ G +PD TY L+S F K + E + + M
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G PN ++ I + A L+ M+ G P+ +YN VI G +
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+K+ M + L+PN Y T+I LC+ G A+ + D K+ +P++ T S+L
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ GL + + +A ++ ++R+
Sbjct: 667 IYGLCQEGKADEAEILLKEMERK 689
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 3/241 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F M GC + + + L + L E+ EK I+ ++++ + I
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPI 352
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
A C + ++A ++ M+K G +P+V TYT LIS + + E+ GL++ M+ +G
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN T+N I L R A K+ M+ G + TYN +IKG C G ++ A +
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLK 372
+ ML +P Y T+I+ +G+ N A + D MK+N P T + L+ G
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL-DLMKENGCEPDEWTYNELVSGFS 531
Query: 373 K 373
K
Sbjct: 532 K 532
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF---DYIEHLLEHQKSLPQGRR 114
+D E + Q F + N F ++RL R F D+I L+ + R
Sbjct: 128 KDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILM-----IKACRN 182
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
E I R+ A + + LY C + L A +++ +R+L
Sbjct: 183 EEEIRRV------ADFLNEISGMGFGFSLYSCNTLLIQL-AKFEMVEGARNLYKQML--- 232
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
IQ + +FN +I + G + +A L++ ++ + + PDV TYT+LI ++
Sbjct: 233 ----NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ G+++ MV +GC PN T++ I L N+ R +A ++ M GIEP TY
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
L I C H + A ++ + M R PN + Y +I L + G +A + +K
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408
Query: 355 KNWVPSVDTISALLEGL 371
+ VP+ T +AL+ L
Sbjct: 409 EGLVPNTVTYNALINEL 425
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I C G +D+A ++ EM + G++P V TYT I+A E L M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+GC PN+ T+ I L + A L M + G+ P+ VTYN +I C G
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K++ M G + N + Y +I LC GD A ++ + +K +P+V T + L
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491
Query: 368 LEG-LKKNN 375
+ G L K N
Sbjct: 492 INGYLTKGN 500
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 31/325 (9%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N ++ ++ L+ RF E + + K QG I ++ G + G + A
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICD--KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F+DM C + + ++ + L + + L E+ E+ + D +F +I F
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM-ERKGLAPDEVTFTSLIDGF 705
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLI------------------------SAFY 232
+G +D A+L++ M +G KP+ TY+ L+ S
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE 765
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD-E 291
KD EI + L M GC P L T++ + L K R ++A +L+ M+ G PD E
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+ Y+L+I C++ +D A K++ ++ + + IY+ +I LC+ G A + +
Sbjct: 826 IYYSLLI-AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 884
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
++K W + L++GL K +
Sbjct: 885 MLEKEWNADEIVWTVLVDGLLKEGE 909
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA-IQAFLMEVPEKFHIQ 183
+ K G ++ A +FY + C ++ + S+D K I L+E E+
Sbjct: 530 FSKWGKLESA--SFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN 587
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ S+N VI + +A + +M + G+ P+VITYTTLI ++ R + +
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M + C PNL T++ I L + ++ +A L+ M+R G+ PDEVT+ +I GF
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G +D A + M+ PN + Y ++ L +E
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKE 743
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V++ A + L+ L+ ++ ++ + + ++N +I C G
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP-NTVTYNALINELCVGGRFST 433
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + M+ G + TY +I E L+ M+ G P + T+N I
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 493
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ K A +L+ LM+ G EPDE TYN ++ GF + G L+ A + M+ L P
Sbjct: 494 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 553
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
N Y T+I ++G ++A + + + P+V++ +A++ GL K N+ +A I
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 612
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
E+ +G + + TL+ K E L+ M+ G P+L TFN I L K
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A ++ + ++ + PD TY +I G CR+ +LD+A V+ M+ PN Y
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
T+I+ LC EG + A M ++ ++K P+V T + + L +A ++A +++R
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374
Query: 391 VPHFSSNQLSAFKSILSK 408
+ +A S LS+
Sbjct: 375 GCRPNVQTYTALISGLSR 392
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
++A DTF M YG TV+S NA L L + + AF E+ + I ++++ N+
Sbjct: 163 RNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEM-RRCRISPNVYTRNM 221
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
V++AFC+ G L+KA V EM+ +G+ P+ +Y TLI + + L N M KG
Sbjct: 222 VMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKG 281
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
N+ TFN I + + +A+K+ M+ + P+ +TYN +I G + G+ +M +
Sbjct: 282 VEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGR 341
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++Y M + + Y +I LC+EG A M K+ K+N VP+ T SAL+ G
Sbjct: 342 RLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISG 400
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 31/266 (11%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYG---------------CKRTVKSLNAALKVLTESRD 165
+M + K+G ++ A+ F +M G C++ + LN+A+K L S
Sbjct: 222 VMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGL--LNSAVK-LKNSMR 278
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K ++A ++ +FN +I FC+ G L +A V EM+ L V P+ ITY
Sbjct: 279 AKGVEA-------------NVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYN 325
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
TLI+ + E+G L+ M G ++ T+N I L + ++ +A ++ + +
Sbjct: 326 TLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKE 385
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ P+ T++ +I G C + D A ++Y +M+ PN + + ++ C+ DF A
Sbjct: 386 NLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGA 445
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+++ + ++ + P D +S + GL
Sbjct: 446 FLVLMEMFERCFTPGSDVLSEIYHGL 471
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 19/240 (7%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFL--------MEVPEKFHIQFDIFS----------FN 190
T+++ + L +LT++R K+ + L +++P+K + ++S F+
Sbjct: 92 TLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKL-FEAILYSYRMCDSSPRVFD 150
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+ K M A ++M+ G P V + +S+ +R +I + M
Sbjct: 151 SLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRC 210
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
PN+ T N+ ++ + +A ++ M+ GI P++ +YN +I G+CR G L+ A
Sbjct: 211 RISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSA 270
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+ ++M + + N + ++I C+EG + A + + N P+ T + L+ G
Sbjct: 271 VKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLING 330
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 7/334 (2%)
Query: 48 PPALVK-----LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
PP L K ++ ++DP K ++F + + + +L +F+ +E +
Sbjct: 3 PPLLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEV 62
Query: 103 L-EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
L + ++++ EG + M YG+ G ++ A++ F M Y C+ TV S NA + +L
Sbjct: 63 LVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILV 122
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
+S M + ++ I D++SF I +K+FC A ++ M G + +V
Sbjct: 123 DSGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNV 181
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y T++ FY++N + G L+ M+ G L+TFN + L K + KL+
Sbjct: 182 VAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDK 241
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ + G+ P+ TYN I+G C+ G LD A ++ ++ + P+ Y +I+ LC+
Sbjct: 242 VIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSK 301
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
F A + + + P T + L+ G K
Sbjct: 302 FQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 37/242 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DIF+FNI+I + ++ A ++ M GV PDV TY +L++ K ++ E +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETY 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KGC PNL TFN+ ++ L + +A L+ M+ + PD VT+ +I GFC++
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 305 GHLD------------------------------------MAKKVYSAMLGRRLMPNRKI 328
G LD MA+K++ M+ R L P+
Sbjct: 580 GDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LV 387
Y+ M+ C+ G+ +L Y + M+ ++PS+ T+ ++ L ++ +A I+ +V
Sbjct: 640 YRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 388 QR 389
Q+
Sbjct: 700 QK 701
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
+ F M G + + N L VL + D+K + L +V ++ + ++F++N
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR-GVLPNLFTYNFF 257
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C+ G LD A ++ + G KPDV+TY LI K+++ + +V +G
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+N I A +++ G PDE TY +I G C G + A
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ LG+ + PN +Y T+I L +G A + + +K +P V T + L+ GL
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLC 437
Query: 373 K 373
K
Sbjct: 438 K 438
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ +N +IK G++ +A + EM + G+ P+V T+ L++ K +
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL +M+ KG FP++ TFN+ I + + A +++ +M G++PD TYN ++ G
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGL 506
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ + + Y M+ + PN + ++ LC+ + A + ++ K+ P
Sbjct: 507 CKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDA 566
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T L++G KN A T+
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTL 588
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+FNI++++ C LDKA ++ EM+ V PD +T+ TLI F K+ + L+
Sbjct: 530 NLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 245 NLM---VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M C + T+N+ I K A KL M + PD TY L++ GF
Sbjct: 590 RKMEEVYMVSC--STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-S 360
C++G++D+ K M+ +P+ +I+ LC E A + ++K VP +
Sbjct: 648 CKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Query: 361 VDTI 364
V+TI
Sbjct: 708 VNTI 711
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
DL ++ E + + ++NI+I AF E + A + EM + PD TY
Sbjct: 581 DLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
++ F K ++G M+ G P+L T I L + R ++A ++ M +
Sbjct: 641 RLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 285 FGIEPDEV 292
G+ P+ V
Sbjct: 701 KGLVPEAV 708
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 48/372 (12%)
Query: 42 VDKPLEPPALVK-LKAERDPEKLFQLFKANAHNRIVIENKY-----AFEDTVSRLAGARR 95
+++ L+P + ++ + DP ++F N++ E+ + ++ + +L +
Sbjct: 1 MNRALQPKHVAAVIRYQNDPLNALKMF-----NQVKTEDGFKHTLETYKCMIEKLGLHGK 55
Query: 96 FDYIEHLL-EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLN 154
F+ +E +L E +K++ EG + IM YG+ G ++ A++ F M Y C+ +V+S N
Sbjct: 56 FEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYN 115
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG-------ILD---- 203
A + +L E M + + I D+++ I +K+FC G +L+
Sbjct: 116 AIMNILVEYGYFSQAHKVYMRMKD-IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174
Query: 204 ------------------------KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+AY + EM K G+ PD++T+ LI K +
Sbjct: 175 QGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ ++ +G PNL TFN+ IQ L K +A +L+ + G+ PD ++YN +I
Sbjct: 235 SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLIC 294
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC+ L A+ M+ + PN Y T+I+ C+ G A + +D+M K ++P
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP 354
Query: 360 SVDTISALLEGL 371
T S+L+ GL
Sbjct: 355 DEFTYSSLINGL 366
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 39/319 (12%)
Query: 107 KSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
+++ +G + I+ ++ G K G++ A+ DM +GC + + N + L +
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
L L + K I DIF+FN +I +C+ +DKA ++ M G+ PDVITY
Sbjct: 441 CLSDANGILNDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TL++ K + + + M+ KGC PN+ T+N+ I+ R+ +A +L M+
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
Query: 285 FGIEPDEVT------------------------------------YNLVIKGFCRSGHLD 308
G+ PD VT +N++I FC ++
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVS 619
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
MA+K++ M G P+ Y+ MI C+ G+ +LA+ +++ K VPS T +L
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679
Query: 369 EGLKKNNQPCKANTIMALV 387
L ++ +A I+ L+
Sbjct: 680 NCLCVTHRLSEAVVIINLM 698
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAGM+++A D G + ++ + L D+ A E EK +
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKH 389
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I +N ++K + G++ +A +M +M + G PD+ TY +++ K NG+
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + KGC P++ TFN I +R +A +++ M GI PD +TYN ++ G C++
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD + AML + PN Y +I C++ + A + K+ + P + T+
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
L+ GL N + KA + +++
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKE 595
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 4/270 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A F +M G + + N + VL + +++ + +V ++ + ++F+FNI
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIF 257
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C G +D+A ++ + G+ PDVI+Y TLI F K ++ + MV G
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN T+N I A+K++ G PDE TY+ +I G C G ++ A
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V+ + + + +Y T++ L ++G A + KD M+ P + T + ++ GL
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 373 KNNQPCKANTIM--ALVQRRVPH-FSSNQL 399
K AN I+ A+ + +P F+ N L
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTL 467
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ AM+ F +M G + +L + L + +L + + +++ + FN
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I AFCE + A + +M PD TY +I ++ K ++ + + K
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
G P+ T + L R +A ++ LM + GI P+EV
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P++ ++N + LV QA+K+ M+ GI PD T+ + +K FC +G A
Sbjct: 107 CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAAL 166
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ + M G+ N Y +I +E AY + + +K+ P + T + L+ L
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVL 226
Query: 372 KKNNQPCKANTIMALVQRR 390
K ++ + + V +R
Sbjct: 227 CKKGNVQESEKLFSKVMKR 245
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 4/290 (1%)
Query: 54 LKAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
L+AERD K +F + + ++ + F +S+L A F E +L K
Sbjct: 22 LRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKC 81
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
E + I YG+ M A+ F+ M+ +GCK T KS + +L E LK +
Sbjct: 82 RITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMS 141
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
F + E ++ + S N++IKA C+ G +D A+ + EM K G PD TY TLI+
Sbjct: 142 FYKYMRE-MGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLING 200
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K + L+ M KGC P++ T++ + L +A L M++ IEP+
Sbjct: 201 LCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPN 260
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
TY+ ++ G C++G A ++ M+ +R PN Y T+I+ LC+EG
Sbjct: 261 VFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEG 310
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V +M G KP +Y ++ + ++N+ ++ + M G ++ + NV I+
Sbjct: 104 AIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIK 163
Query: 265 HLVNKRRSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + A ++ M + G +PD TY +I G C+ G AK+++ M +
Sbjct: 164 ALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCS 223
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y ++H LCQ G+ + A + KK P+V T S+L++GL KN +A +
Sbjct: 224 PSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMEL 283
Query: 384 MALVQRR 390
+ ++ R+
Sbjct: 284 LEMMVRK 290
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A + F +M GC +V + + + L ++ ++ ++ +K I+ ++
Sbjct: 203 KLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK-AIEPNV 261
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ ++ C+ G +A ++ M + KP+++TY+TLI+ K+ + +
Sbjct: 262 FTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDR 321
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY-------NLVIK 299
M +G P+ + I N R+ +A + M I P+ VT+ N+V++
Sbjct: 322 MKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQ 381
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C +G+L+ + ++Y M R + + + +++ C++GD + A + + + VP
Sbjct: 382 GLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVP 441
Query: 360 SVDTISALLEGL 371
SA++ G
Sbjct: 442 DHGIWSAVVGGF 453
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 3/328 (0%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P L+K+ A RDP + FK R N+ + + RLA RRF +E +L
Sbjct: 36 LSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEVLA 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
++ + F R++ +YG A + A++T + M Y C + K+ N L +L
Sbjct: 96 RARAESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCK 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + + + + + D FNI++K C+ G D A ++ EM K G P+V T
Sbjct: 156 RQYEVVHEVYLSA-SRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTT 214
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+TL++ + + + L M + + +N+ I L ++R +A L M
Sbjct: 215 YSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMV 274
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G P+ TY +++ G SG AK + S M R+ P ++ +I LC +
Sbjct: 275 PKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLD 334
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGL 371
A+++ K +++ +VP V T + L+ +
Sbjct: 335 DAHLVLKQMVEQGFVPRVGTWTKLVTSM 362
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P+ TFN + LV KR+ +++ R G+ D +N+++KG C+ G D A
Sbjct: 138 CWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAI 197
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M + +PN Y T++++LCQ G + A+ +C+ K++ + L+ GL
Sbjct: 198 SLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGL 257
Query: 372 KKNNQPCKA 380
+ + +A
Sbjct: 258 CREQRVTEA 266
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 130/249 (52%), Gaps = 3/249 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA +K A+ F M + ++ N + L ++R L E+ + +
Sbjct: 17 FCKANQLKQALACFEKMREFVAPNE-RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAP 75
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ +++ VI FC+ G +D+A ++ EM + G+ PDV+TYT+++ +D + + +
Sbjct: 76 DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM 135
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-LMQRFGIEPDEVTYNLVIKGFC 302
M KG P+ TF+ I N R+ +A KL ++ +PD VTY +I GFC
Sbjct: 136 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFC 195
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+SG+L+ A K+ M GR+ +PN Y +++H LC+ GD + A + + K VP+V
Sbjct: 196 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 255
Query: 363 TISALLEGL 371
T + L+ GL
Sbjct: 256 TYTTLIHGL 264
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
++E +K +P + +L+G KAG + A+D F M GC V + +
Sbjct: 209 VMEGRKCVPN-----VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 263
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + + A + LM+ D S+N ++ +C +G +++A + EM P
Sbjct: 264 LCAAHKVDAAR-LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP 322
Query: 220 DVITYTTLISAFYKDNRPEIGNGLW-NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
D ITYT L+ F +R E L N+ G P++ T+++ + +R +A +
Sbjct: 323 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 382
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ M + P+ VTY+ +I G C++G +D A +V M+ +R+ P+ + ++I LC+
Sbjct: 383 IQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCR 442
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
GD + A+ + P + T + LLEG + +
Sbjct: 443 LGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A + +M L G + + +A + +R + E+ + D+ +
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I FC+ G L+KA ++ M+ P+V+TY++L+ K + L+ M
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC PN+ T+ I L + A LM M PD V+YN ++ G+CR G ++
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISAL 367
AK+++ M + +P+R Y ++ C A + ++ + P V T S +
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366
Query: 368 LEGLKK 373
+ G +
Sbjct: 367 VAGYSR 372
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 9/268 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G I+ A F +M C + ++ + L+ + L + I
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++IV+ + +A + EM V P+ +TY++LI K R + +
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL 418
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV K P++ TFN I L +A KL+ M G+EP VTY +++GF R+
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 478
Query: 305 GHLDMAKKVYSAM--------LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
G +++A +++ M L+P + + +I LC+ + + A + ++ +
Sbjct: 479 GRMEIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRE 537
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIM 384
P+ + A+++GL + + +A ++
Sbjct: 538 CEPAEEDCLAIVDGLLRAGRTEEAGKLI 565
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+V+ C+ + KAY V+ EM+ V PD++TY+T+I+ F K +
Sbjct: 43 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD-------- 94
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ C L ++ R GI PD VTY V+ G CR G
Sbjct: 95 ---RAC-----------------------EILREMVTRDGIAPDVVTYTSVVDGLCRDGK 128
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTIS 365
+D A ++ M + + P++ + +I C + A + K+ + +W P V T +
Sbjct: 129 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYT 188
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR--VPH 393
AL++G K+ KA ++ +++ R VP+
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPN 218
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+P VT+ ++I GFC++ L A + M + PN + Y +++ LC+ + AY
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 348 MCKDSMK-KNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K+ K+ P + T S ++ G K + +A I+
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEIL 100
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 135/270 (50%), Gaps = 3/270 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ + G + A D F +M G + + N L L E+ L KA++ F +V +K +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF--KVFQKSKMD 298
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D + NI+I C+ +D+A+ + + GV+ DV+TY LI F K+ +
Sbjct: 299 LDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+CKG P+ T+N + + R +A +++ M G PD VT++ +IKG+C+
Sbjct: 359 YLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCK 418
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G +D +++S M R L+ + Y +IH C+ GD N A + ++ + P T
Sbjct: 419 AGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTIT 478
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRRVPH 393
++L GL + K T++ +Q+ V H
Sbjct: 479 FRSMLAGLCTKAELQKGLTMLEDLQKSVDH 508
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 145 GCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC V + + L E R L+A+ A + + E+ H Q D ++ ++ C++G
Sbjct: 5 GCPANVVTFTTLMNGLCREGRVLQAL-ALVDRMVEEGH-QPDAVTYGTIVNGMCKLGDTV 62
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ +M + +K +V+ Y+ ++ KD ++ M KG FPN+ T+N I
Sbjct: 63 SALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + A +L+ M I+PD VT++ +I F + G + A+++Y ML R +
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
P Y +MI C+ A M + K P + T++ L++G
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDG 229
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
++ I+ ++ ++ ++ C+ G KA + EM + G+ P+V+TY +I + +
Sbjct: 72 DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L M+ + P++ TF+ I V + + A +L M R I P +TY+ +
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT-----------MIHYLCQEGDFNLAY 346
I GFC+ L+ AK ++ M+ + P+ T +IH CQ G+ N+A
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ ++ + P + T + LL GL +N + KA + + Q+
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 50/319 (15%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + F +MH G V + N + + L ++ E+ +I D+ +F+ +I
Sbjct: 99 AQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIER-NIDPDVVTFSALI 157
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
AF + G + A + EM + + P ITY+++I F K +R E +++LMV KGC
Sbjct: 158 NAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCS 217
Query: 254 PNLATFNVRIQHLVNKRRSW-----------QANKLMGLMQRFGIEPDEVTYN------- 295
P++ T N I +R A L M G+ PD VT N
Sbjct: 218 PDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC 277
Query: 296 ----------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++I G C+ +D A +++++ + +
Sbjct: 278 ENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVV 337
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
Y +I +EG+F A + + + K +PS T +++++G K N+ +A +V
Sbjct: 338 TYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEAR---QMV 394
Query: 388 QRRVPHFSSNQLSAFKSIL 406
V S + F +++
Sbjct: 395 DSMVSEGCSPDVVTFSTLI 413
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G +V+T+TTL++ ++ R L + MV +G P+ T+ + +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ A ++ M I+ + V Y+ ++ C+ G+ A+ +++ M + + PN Y
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
MI C G ++ A + +D +++N P V T SAL+ K + A + + RR
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 48/372 (12%)
Query: 42 VDKPLEPPALVK-LKAERDPEKLFQLFKANAHNRIVIENKY-----AFEDTVSRLAGARR 95
+++ L+P + ++ + DP ++F N++ E+ + ++ + +L +
Sbjct: 1 MNRALQPKHVAAVIRYQNDPLNALKMF-----NQVKTEDGFKHTLETYKCMIEKLGLHGK 55
Query: 96 FDYIEHLL-EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLN 154
F+ +E +L E +K++ EG + IM YG+ G ++ A++ F M Y C+ +V+S N
Sbjct: 56 FEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYN 115
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG-------ILD---- 203
A + +L E M + + I D+++ I +K+FC G +L+
Sbjct: 116 AIMNILVEYGYFSQAHKVYMRMKD-IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174
Query: 204 ------------------------KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+AY + EM K G+ PD++T+ LI K +
Sbjct: 175 QGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ ++ +G PNL TFN+ IQ L K +A +L+ + G+ PD ++YN +I
Sbjct: 235 SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLIC 294
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC+ L A+ M+ + PN Y T+I+ C+ G A + +D+M K ++P
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP 354
Query: 360 SVDTISALLEGL 371
T S+L+ GL
Sbjct: 355 DEFTYSSLINGL 366
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 145/319 (45%), Gaps = 39/319 (12%)
Query: 107 KSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
+++ +G + I+ ++ G K G++ A+ DM +GC + + N + L +
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
L L + K I DIF+FN +I +C+ +DKA ++ M G+ PDVITY
Sbjct: 441 CLSDANGILNDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TL++ K + + + M+ KGC PN+ T+N+ I+ R+ +A +L M+
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559
Query: 285 FGIEPDEVT------------------------------------YNLVIKGFCRSGHLD 308
G+ PD VT +N++I FC ++
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVS 619
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
MA+K++ M G P+ Y+ MI C+ G+ +LA+ +++ K VPS T +L
Sbjct: 620 MAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVL 679
Query: 369 EGLKKNNQPCKANTIMALV 387
L ++ +A I+ L+
Sbjct: 680 NCLCVTHRLSEAVVIINLM 698
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAGM+++A D G + ++ + L D+ A E EK +
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKH 389
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I +N ++K + G++ +A +M +M + G PD+ TY +++ K NG+
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + KGC P++ TFN I +R +A +++ M GI PD +TYN ++ G C++
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD + AML + PN Y +I C++ + A + K+ + P + T+
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
L+ GL N + KA + +++
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKE 595
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 4/270 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A F +M G + + N + VL + +++ + +V ++ + ++F+FNI
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIF 257
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C G +D+A ++ + G+ PDVI+Y TLI F K ++ + MV G
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN T+N I A+K++ G PDE TY+ +I G C G ++ A
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V+ + + + +Y T++ L ++G A + KD M+ P + T + ++ GL
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 373 KNNQPCKANTIM--ALVQRRVPH-FSSNQL 399
K AN I+ A+ + +P F+ N L
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTL 467
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ AM+ F +M G + +L + L + +L + + +++ + FN
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I AFC + A + +M PD TY +I ++ K ++ + + K
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
G P+ T + L R +A ++ LM + GI P+EV
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P++ ++N + LV QA+K+ M+ GI PD T+ + +K FC +G A
Sbjct: 107 CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAAL 166
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ + M G+ N Y +I +E AY + + +K+ P + T + L+ L
Sbjct: 167 RLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVL 226
Query: 372 KKNNQPCKANTIMALVQRR 390
K ++ + + V +R
Sbjct: 227 CKKGNVQESEKLFSKVMKR 245
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 142/331 (42%), Gaps = 34/331 (10%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYG 145
+ +L A+ F I+ LL K RE + IM YG+A + A DM +Y
Sbjct: 109 IDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYC 168
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C+ T KS N L +L + E+ K I +++F +V+KA C + +D A
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIP-TVYTFGVVMKALCMVNEVDNA 227
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
++ +M K G P+ + Y TLI A K +R L M GC P++ TFN I
Sbjct: 228 CSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYG 287
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK------------- 312
L R + KL+ M G P+++TY +++ G CR G +D A+
Sbjct: 288 LCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHF 347
Query: 313 -------------------VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+Y M+ P+ + T+IH LC++G A M D
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
P++ T + LL+G K NQ +A ++
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVL 438
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 4/303 (1%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
N++ N F ++ + R D L + K + G R +++G K G+
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFL-YDKMIKNGCRPDVFTFNTLIHGLCKKGL 395
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D DM GC + + L + L+ L E+ K + +I +N
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK-GFELNIMGYN 454
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++++A C+ G + KA ++ EM G KPD+ T+ TLI K +R E L+ M+
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD 514
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N T+N I + +A KL+ M G DE+TYN +IK FC+ G + A
Sbjct: 515 GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKA 574
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M+ + L+P+ +I+ LC+ G A + +D + + P V T ++L+ G
Sbjct: 575 LGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLING 634
Query: 371 LKK 373
L K
Sbjct: 635 LCK 637
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 115/238 (48%), Gaps = 9/238 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL----KVLTESRDLKAIQAFLMEVPEKFHI 182
K G + A+D +M GCK + + N + KV + L + L++ +
Sbjct: 462 KNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD-----GV 516
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++N +I AF G + +A ++ +M G D ITY LI AF K E G
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALG 576
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L++ MV K P+ + N+ I L + A +L+ M G+ PD VTYN +I G C
Sbjct: 577 LFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ G++ A +++ + + P+ Y T+I + C+ G F+ AY++ ++ ++P+
Sbjct: 637 KMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPN 694
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 110/255 (43%), Gaps = 35/255 (13%)
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+S L AFL + K + D+F+FN +I C+ G++ A ++ +M G P+
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLM------------------VCK------------ 250
+ITYTTL+ F K N+ E + N M +CK
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLG 474
Query: 251 -----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
GC P++ TFN I L R A L M G+ + VTYN +I F R G
Sbjct: 475 EMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A K+ + ML R + Y +I C+ G A + + ++K+ VPS + +
Sbjct: 535 AIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCN 594
Query: 366 ALLEGLKKNNQPCKA 380
L+ GL + + C A
Sbjct: 595 LLINGLCRVGKVCNA 609
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
+ G + +A++ DM G V + N+ + L + +++ +AF L + IQ D
Sbjct: 602 RVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIR--EAFNLFNKLQAEGIQPD 659
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++N +I C G+ D AYL+++ + P+ +T+ L+S F K+ E G
Sbjct: 660 AITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRRE--GFIMR--------------IMMLYGKAG 129
T L AR +D + +L H + G + G +M ++ +Y K G
Sbjct: 869 TAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEG 928
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
MI +A++TF + L G K +V + N L + + + + + + E+ +K I ++ +F
Sbjct: 929 MIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-GICPNVGTF 987
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI+I C G L KA ++ +M++ G P ++TY TL++ + K R + L + M+C
Sbjct: 988 NILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 1047
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG ++ T+NV I +L RS +A L+ M++ I P+EVTYN +I GF + G + +
Sbjct: 1048 KGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 1107
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
A +V++ M L PN Y +I C GDF A
Sbjct: 1108 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 1143
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
KF + + ++N +I C +G ++A ++ M+ G++ + +TY TL++ K +
Sbjct: 1116 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 1175
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E+ L M + V I L +A +L+G M + G+ PD +TY+ +
Sbjct: 1176 ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSL 1235
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
I GFCR G++ AK++ M L+ N+ IY T+I+ CQ G+ A
Sbjct: 1236 INGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 1283
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ ++N+ I C KAYL++ +M+K + P+ +TY TLI+ F K+ + +
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M PN T+N I + +A +L+ M+ G+ +EVTY ++ G
Sbjct: 1110 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ ++AK++ M ++ Y +I LC+ G + A + + K P V
Sbjct: 1170 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T S+L+ G + A I+ + R
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYR 1257
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++I C+ G+LD+A ++ M K GV PDVITY++LI+ F + + + M
Sbjct: 1196 AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 1255
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G N ++ I + +A K+ +M G D T N+++ CR G L
Sbjct: 1256 YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 1315
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+K M L+PN Y +I+ GD A+ D +K PS T +L
Sbjct: 1316 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 1375
Query: 368 LEGLKKNNQPCKA 380
L+GL K +A
Sbjct: 1376 LKGLCKGGNLVEA 1388
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ N+++ + C G L +A + M ++G+ P+ ITY +I+ + P +
Sbjct: 1298 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 1357
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 1358 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 1417
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G+L A ++ M+ ++P+ Y +++ LC++G A + +M + + P+
Sbjct: 1418 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 1477
Query: 364 ISALLEGLKKNNQP 377
+ L++GL K P
Sbjct: 1478 YTCLVDGLSKAGHP 1491
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAG K A F +M G C TV + NA + + + F + + + +
Sbjct: 1487 KAGHPKAAFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFFSTM-RWWGVCPN 1544
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++NI++ F + L + + M + G+ PD +T+ +LI K P++G L
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G + TFN+ I + +A L+ M G+ PD TYN + G +
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI- 364
+ V ML ++P Y T+I+ +C+ GD A+ + KD M+ S +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL-KDEMEALGFGSHEVAE 1723
Query: 365 SALLEGL 371
SA++ GL
Sbjct: 1724 SAMVRGL 1730
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I FC +G + A ++ M + G+ + I Y+TLI F + ++
Sbjct: 1228 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 1287
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI------ 298
+M C G + T NV + L + +A K + M R G+ P+ +TY+ +I
Sbjct: 1288 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 1347
Query: 299 -----------------------------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
KG C+ G+L AKK + + + +Y
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 1407
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T++ C+ G+ + A + ++ N +P T S+LL GL + + A +
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467
Query: 390 RVPHF 394
R F
Sbjct: 1468 RGTLF 1472
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ + G A+ EM K G PD + + +I + + + N ++ M
Sbjct: 1478 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 1537
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PNLAT+N+ + K+ + L M R GI PD++T++ +I G +SG D
Sbjct: 1538 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ K+ M+ + ++ + +I+ + G A+ + P DT + +
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657
Query: 369 EGLKK 373
GL K
Sbjct: 1658 NGLNK 1662
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 185 DIFSFNIVIKAFCEMG-ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++++ ++ C G + L M + + P+ + YT L+ K P+
Sbjct: 1438 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 1497
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ KG P+ FN I + + +AN M+ +G+ P+ TYN+++ GF +
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L +YS M+ + P++ + ++I L + G
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 1594
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FNI+I + E G + KA+ ++ M LGV PD TY + + K + +
Sbjct: 1614 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 1673
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P A + I + A KL M+ G EV + +++G
Sbjct: 1674 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 1733
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G + A V ML RL+P + T++H C++
Sbjct: 1734 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 1768
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 9/213 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---- 180
Y ++G ++ A D M+ G + N L + + L E+ E
Sbjct: 1625 YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 1684
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H Q+ +I C +G + A+ + EM+ LG + + ++ + E
Sbjct: 1685 HAQYIT-----LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 1739
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + M+ P +ATF + + +A KL G+M+ G++ D V YN++I G
Sbjct: 1740 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1799
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
C +G A ++Y M R L PN Y ++
Sbjct: 1800 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1832
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 192 VIKAFCEMGILDKAYL--VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+++ C+MGI K+ +M P V + LI + K+ + + L+
Sbjct: 885 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGL 942
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P++ T N+ + +V +R+ L M GI P+ T+N++I G C G+L
Sbjct: 943 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 1002
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M +P Y T++++ C++G + A + + K V T + ++
Sbjct: 1003 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 1062
Query: 370 GLKKNNQPCKA 380
L N++ KA
Sbjct: 1063 NLCTNHRSAKA 1073
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 4/317 (1%)
Query: 46 LEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P ++K+ R+PE + + + + + N+ + +++LA AR FD IE +++
Sbjct: 50 LSPREVLKIFDGLRNPESVMPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIEDVIK 109
Query: 105 HQKSLPQGR-REGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
K Q R + F ++ +YG AG A++T +DM + C +VK+ N L +L
Sbjct: 110 TLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVS 169
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ + PE ++ D NI++K C G +D A ++ E K +P+V
Sbjct: 170 AKRFDVVHKVYAGAPE-LGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVR 228
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T++TL+ + R E GL M +G +P+ FN+ I L + R + +L+G M
Sbjct: 229 TFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRM 288
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G P+ +Y V+ G +G AK+ M+ + P+ Y+ MI+ LC+E
Sbjct: 289 KLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLV 348
Query: 343 NLAYIMCKDSMKKNWVP 359
+ K +++ +VP
Sbjct: 349 ADVVWILKQMVEQGFVP 365
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P++ TFN+ + LV+ +R +K+ G+E D N+++KG CRSG++D A
Sbjct: 153 CWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAAC 212
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ +R PN + + T++H LC+ G A + + ++ P + L+ GL
Sbjct: 213 ELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL 272
Query: 372 KKNNQ 376
+K +
Sbjct: 273 RKRGR 277
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 163/338 (48%), Gaps = 8/338 (2%)
Query: 44 KPLEPPALVK-LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
+ L P A+VK L + D + + F+ N A+ + L A+ F ++ L
Sbjct: 179 QDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSL 238
Query: 103 LEHQKSLPQGRR--EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTV--KSLNAALK 158
L QK QGR + +M YG++G K +++ F M G + + + N+ L
Sbjct: 239 L--QKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLV 296
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
L +++ L + ++ + + ++ +I+ F ++ A ++ +M +
Sbjct: 297 SLVKNKKLDMAENLFAQMINN-GVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYA 355
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PDV+TYT +ISA K E G+ M GC PN+ T+N IQ L RR +A +L
Sbjct: 356 PDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALEL 415
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ LM++ G+ P+ TY ++ G C+ LD AK++++ L R L PNR Y T+++ C+
Sbjct: 416 VTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCR 475
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K+ + + P T + L++GL + NQ
Sbjct: 476 GSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQ 513
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 9/282 (3%)
Query: 50 ALVK-LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
AL++ L A R PE+ +L V N Y + L RR D + + ++
Sbjct: 398 ALIQGLCAVRRPEEALELVTLMEQGG-VPPNIYTYTILTHGLCKLRRLDRAKEMF--NEA 454
Query: 109 LPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
L +G + + +L Y + + AMD +MH C + ++ L + L
Sbjct: 455 LARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQL 514
Query: 167 KAIQAFLMEVPEK-FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
E+ K + + FD + NI+ + +G A + M+ G Y
Sbjct: 515 PDALRMHDEMENKGYDVNFD--TLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYY 572
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
I E L M+ KG PNL T+N I+ + R A+ ++ M
Sbjct: 573 LAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIEN 632
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
GI PD +YN++IK F G A ++Y+ L R ++ N K
Sbjct: 633 GIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPK 674
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 83/203 (40%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ +C L +A ++ EM + PD +TYTTLI + N+ + + M
Sbjct: 465 TYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEM 524
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG N T N+ + L A+ M+ G Y L I +G +
Sbjct: 525 ENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEM 584
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A+ + M+ + PN Y TMI C++G + A M ++ P + + L
Sbjct: 585 EEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNIL 644
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
++ + A+ + A R
Sbjct: 645 IKEFHNQGRTQDADQLYATALER 667
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
+A +KVL D + F ++ + ++ +I + + ++ +MQ
Sbjct: 184 DAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQ 243
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL--ATFNVRIQHLVNKRR 271
G + + + ++ + R + +NLM G P L +N + LV ++
Sbjct: 244 TQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKK 303
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A L M G+ + +TY +I+ F ++ A K+ M+ P+ Y
Sbjct: 304 LDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTI 363
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I LC+ AY + + + P++ T +AL++GL +P +A ++ L+++
Sbjct: 364 VISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQ 421
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 17/307 (5%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRRE--GFIMR--------------IMMLYGKAG 129
T L AR +D + +L H + G + G +M ++ +Y K G
Sbjct: 118 TAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEG 177
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
MI +A++TF + L G K +V + N L + + + + + + E+ +K I ++ +F
Sbjct: 178 MIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-GICPNVGTF 236
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI+I C G L KA ++ +M++ G P ++TY TL++ + K R + L + M+C
Sbjct: 237 NILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 296
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG ++ T+NV I +L RS +A L+ M++ I P+EVTYN +I GF + G + +
Sbjct: 297 KGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +V++ M L PN Y +I C GDF A + + T LL
Sbjct: 357 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLN 416
Query: 370 GLKKNNQ 376
GL K+ +
Sbjct: 417 GLCKHEK 423
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
KF + + ++N +I C +G ++A ++ M+ G++ + +TY TL++ K +
Sbjct: 365 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 424
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E+ L M + V I L +A +L+G M + G+ PD +TY+ +
Sbjct: 425 ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSL 484
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
I GFCR G++ AK++ M L+ N+ IY T+I+ CQ G+ A
Sbjct: 485 INGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 532
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ ++N+ I C KAYL++ +M+K + P+ +TY TLI+ F K+ + +
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M PN T+N I + +A +L+ M+ G+ +EVTY ++ G
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ ++AK++ M ++ Y +I LC+ G + A + + K P V
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T S+L+ G + A I+ + R
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYR 506
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++I C+ G+LD+A ++ M K GV PDVITY++LI+ F + + + M
Sbjct: 445 AYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRM 504
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G N ++ I + +A K+ +M G D T N+++ CR G L
Sbjct: 505 YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 564
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+K M L+PN Y +I+ GD A+ D +K PS T +L
Sbjct: 565 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 624
Query: 368 LEGLKKNNQPCKA 380
L+GL K +A
Sbjct: 625 LKGLCKGGNLVEA 637
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ N+++ + C G L +A + M ++G+ P+ ITY +I+ + P +
Sbjct: 547 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 606
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 607 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 666
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G+L A ++ M+ ++P+ Y +++ LC++G A + +M + + P+
Sbjct: 667 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 726
Query: 364 ISALLEGLKKNNQP 377
+ L++GL K P
Sbjct: 727 YTCLVDGLSKAGHP 740
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAG K A F +M G C TV + NA + + + F + + + +
Sbjct: 736 KAGHPKAAFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFFSTM-RWWGVCPN 793
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++NI++ F + L + + M + G+ PD +T+ +LI K P++G L
Sbjct: 794 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 853
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G + TFN+ I + +A L+ M G+ PD TYN + G +
Sbjct: 854 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI- 364
+ V ML ++P Y T+I+ +C+ GD A+ + KD M+ S +
Sbjct: 914 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL-KDEMEALGFGSHEVAE 972
Query: 365 SALLEGL 371
SA++ GL
Sbjct: 973 SAMVRGL 979
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I FC +G + A ++ M + G+ + I Y+TLI F + ++
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 536
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI------ 298
+M C G + T NV + L + +A K + M R G+ P+ +TY+ +I
Sbjct: 537 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 596
Query: 299 -----------------------------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
KG C+ G+L AKK + + + +Y
Sbjct: 597 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 656
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T++ C+ G+ + A + ++ N +P T S+LL GL + + A +
Sbjct: 657 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716
Query: 390 RVPHF 394
R F
Sbjct: 717 RGTLF 721
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ + G A+ EM K G PD + + +I + + + N ++ M
Sbjct: 727 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 786
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PNLAT+N+ + K+ + L M R GI PD++T++ +I G +SG D
Sbjct: 787 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ K+ M+ + ++ + +I+ + G A+ + P DT + +
Sbjct: 847 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906
Query: 369 EGLKKNN 375
GL K +
Sbjct: 907 NGLNKKS 913
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 185 DIFSFNIVIKAFCEMG-ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++++ ++ C G + L M + + P+ + YT L+ K P+
Sbjct: 687 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ KG P+ FN I + + +AN M+ +G+ P+ TYN+++ GF +
Sbjct: 747 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L +YS M+ + P++ + ++I L + G
Sbjct: 807 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 843
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FNI+I + E G + KA+ ++ M LGV PD TY + + K + +
Sbjct: 863 DQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVL 922
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P A + I + A KL M+ G EV + +++G
Sbjct: 923 HEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHC 982
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G + A V ML RL+P + T++H C++
Sbjct: 983 GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 1017
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 9/213 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---- 180
Y ++G ++ A D M+ G + N L + + L E+ E
Sbjct: 874 YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 933
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H Q+ +I C +G + A+ + EM+ LG + + ++ + E
Sbjct: 934 HAQYIT-----LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 988
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + M+ P +ATF + + +A KL G+M+ G++ D V YN++I G
Sbjct: 989 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1048
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
C +G A ++Y M R L PN Y ++
Sbjct: 1049 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1081
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 192 VIKAFCEMGILDKAYL--VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+++ C+MGI K+ +M P V + LI + K+ + + L+
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGL 191
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P++ T N+ + +V +R+ L M GI P+ T+N++I G C G+L
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M +P Y T++++ C++G + A + + K V T + ++
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 311
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
L N++ KA + L + R S N+++
Sbjct: 312 NLCTNHRSAKA--YLLLKKMRKEMISPNEVT 340
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 11/306 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-REGFIMRIMMLYGK-AGMIKHAMD 136
NK + VSRLA R FD IE ++ K+ R + F ++ +YG AG + A+D
Sbjct: 90 NKEIYTLVVSRLAEGRLFDDIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAID 149
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
T +DM Y C +VK+ N L +L ++ + M P K I+ D NI++K
Sbjct: 150 TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAP-KLGIEIDACCLNILVKGL 208
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK----GC 252
C+ G LD A V+ E + +P+V T++TL+ ++ E+G L + CK G
Sbjct: 209 CQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENG--ELGRALE--LFCKMENEGV 264
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ TFN+ I L K+R +A +L+G M+ G P+ TY V+ G +G A+
Sbjct: 265 CPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVLYGLLDTGKFIEARD 324
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
M+ + P+ Y+ ++ LC++ + K + + +VP V +L +
Sbjct: 325 CMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWVLKQMVMQGFVPKVGMWKVILRCML 384
Query: 373 KNNQPC 378
N+ C
Sbjct: 385 SGNEEC 390
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRRE--GFIMR--------------IMMLYGKAG 129
T L AR +D + +L H + G + G +M ++ +Y K G
Sbjct: 118 TAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEG 177
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
MI +A++TF + L G K +V + N L + + + + + + E+ +K I ++ +F
Sbjct: 178 MIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK-GICPNVGTF 236
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI+I C G L KA ++ +M++ G P ++TY TL++ + K R + L + M+C
Sbjct: 237 NILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMIC 296
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG ++ T+NV I +L RS +A L+ M++ I P+EVTYN +I GF + G + +
Sbjct: 297 KGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
A +V++ M L PN Y +I C GDF A
Sbjct: 357 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+ + + G++D A + +G KP V T ++++ KD R E+ L+ M
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN+ TFN+ I L + +A L+ M+ G P VTYN ++ +C+ G
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ M+ + + + Y I LC AY++ K K+ P+ T + L+
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345
Query: 369 EGLKKNNQ 376
G K +
Sbjct: 346 NGFVKEGK 353
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ N+++ + C G L +A + M ++G+ P+ ITY +I+ + P +
Sbjct: 430 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 489
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 490 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 549
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G+L A ++ M+ ++P+ Y +++ LC++G A + +M + + P+
Sbjct: 550 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609
Query: 364 ISALLEGLKKNNQP 377
+ L++GL K P
Sbjct: 610 YTCLVDGLSKAGHP 623
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ ++N+ I C KAYL++ +M+K + P+ +TY TLI+ F K+ + +
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358
Query: 242 GLWNLMVCKGCFPNLATFNVRIQ---HLVNKRRSW--------------------QANKL 278
++N M PN T+N I H+ + + +A K+
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKV 418
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+M G D T N+++ CR G L A+K M L+PN Y +I+
Sbjct: 419 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 478
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
GD A+ D +K PS T +LL+GL K +A
Sbjct: 479 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEA 520
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ + G A+ EM K G PD + + +I + + + N ++ M
Sbjct: 610 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 669
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PNLAT+N+ + K+ + L M R GI PD++T++ +I G +SG D
Sbjct: 670 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 729
Query: 309 MAKK------------VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+ K V ML ++P Y T+I+ +C+ GD A+ + KD M+
Sbjct: 730 LGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL-KDEMEAL 788
Query: 357 WVPSVDTI-SALLEGL 371
S + SA++ GL
Sbjct: 789 GFGSHEVAESAMVRGL 804
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 185 DIFSFNIVIKAFCEMG-ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++++ ++ C G + L M + + P+ + YT L+ K P+
Sbjct: 570 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 629
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ KG P+ FN I + + +AN M+ +G+ P+ TYN+++ GF +
Sbjct: 630 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 689
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L +YS M+ + P++ + ++I L + G
Sbjct: 690 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 726
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I C +G + A+ + EM+ LG + + ++ + E + + M+
Sbjct: 765 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 824
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P +ATF + + +A KL G+M+ G++ D V YN++I G C +G A
Sbjct: 825 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 884
Query: 312 KVYSAMLGRRLMPNRKIYQTMI 333
++Y M R L PN Y ++
Sbjct: 885 ELYEEMRHRDLCPNITTYAVLV 906
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 192 VIKAFCEMGILDKAYL--VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+++ C+MGI K+ +M P V + LI + K+ + + L+
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGL 191
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P++ T N+ + +V +R+ L M GI P+ T+N++I G C G+L
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M +P Y T++++ C++G + A + + K V T + ++
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 311
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
L N++ KA + L + R S N+++
Sbjct: 312 NLCTNHRSAKA--YLLLKKMRKEMISPNEVT 340
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 15/226 (6%)
Query: 127 KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAG K A F +M G C TV + NA + + + F + + +
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFF-STMRWWGVCPN 676
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++NI++ F + L + + M + G+ PD +T+ +LI K P++G L
Sbjct: 677 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 736
Query: 246 LMVCK------------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ + G P A + I + A KL M+ G EV
Sbjct: 737 KMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 796
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ +++G G + A V ML RL+P + T++H C++
Sbjct: 797 ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 842
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 3/328 (0%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P L+K+ A RDP + FK R N+ + + RLA RRF +E LL
Sbjct: 36 LSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLA 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
++ + F R++ +YG A + A++T + M Y C + K+ N L +L
Sbjct: 96 RARAERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCK 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + + + + + D FNI++K C+ G A ++ EM K G P+V T
Sbjct: 156 RQYEVVHEVYLSA-SRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTT 214
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+TL++ + + + L M + + +N+ I L ++R +A L M
Sbjct: 215 YSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMV 274
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G P+ TY +++ G SG AK + S M R+ P ++ +I LC +
Sbjct: 275 PKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLD 334
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGL 371
A+++ K +++ +VP V T + L+ +
Sbjct: 335 DAHLVLKQMVEQGFVPRVGTWTKLVTSM 362
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P+ TFN + LV KR+ +++ R G+ D +N+++KG C+ G A
Sbjct: 138 CWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAI 197
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M + +PN Y T++++LCQ G + A+ +C+ K++ V + L+ GL
Sbjct: 198 SLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGL 257
Query: 372 KKNNQPCKA 380
+ + +A
Sbjct: 258 CREQRVTEA 266
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+ FN+ ++ L + A L+ M + G P+ TY+ ++ C+ G +D A ++
Sbjct: 176 DTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELC 235
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
M ++ + +Y +I LC+E A+ + K + K P+ T LL+GL +
Sbjct: 236 ERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSS 295
Query: 375 NQPCKANTIMALV--QRRVPHFSSNQL 399
+ +A +++++ +R P FSS +L
Sbjct: 296 GKFVEAKGLVSMMRAERMRPGFSSFKL 322
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 138/248 (55%), Gaps = 7/248 (2%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C++ V + + L ++ L + ++ +K + + +++N++I FC++ + +A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNE-WTYNVLINGFCKVHKVHRA 61
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
YL++ EM++ G+ P+V+TY+T+I F + + + L+ MV GC PNL T+N +
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L +A +L+ M+ G++PD+ +Y+ ++ G C++G +DMA KV+ P+
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCK--DSMKKNWV-PSVDTISALLEGLKKNNQPCKANT 382
Y T+I LC+ G + A CK + M++N P V T +AL++GL K ++ +A
Sbjct: 182 VVAYSTLIAGLCKTGRLDEA---CKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238
Query: 383 IMALVQRR 390
++ ++ R
Sbjct: 239 VLETMEDR 246
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A F M C+ V + A + L + L+ Q L E E + ++
Sbjct: 194 KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL-ETMEDRNCTPNV 252
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C+ G + A V M G++P+V+TY +LI F N + L
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC P++ T+N I L R+ +AN+L G M+ PD +TY+ +I GFC+
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+DMA+ ++ ML + ++P+ + T++ C G + A + ++ + + P V T ++
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L++G K + +A ++ + +R
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKR 456
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F M GC + + N L L + + L E+ E+ +Q D FS++
Sbjct: 93 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER-GLQPDKFSYD 151
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ G +D A V + PDV+ Y+TLI+ K R + L+ M
Sbjct: 152 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMREN 211
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P++ TF + L R +A +++ M+ P+ +TY+ +I G C++G + A
Sbjct: 212 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 271
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++V+ M+ R + PN Y ++IH C + A ++ ++ +P + T + L++G
Sbjct: 272 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 331
Query: 371 LKKNNQPCKANTIMA 385
L K + +AN +
Sbjct: 332 LCKTGRAPEANRLFG 346
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A M C V + ++ + L ++ ++ Q + + I+ ++
Sbjct: 229 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR-GIEPNV 287
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I FC +D A L+M EM G PD+ITY TLI K R N L+
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 347
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M K C P++ T++ I R A L M + + PD VT++ +++G+C +G
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A+++ M+ P+ Y +++ C+ G A + K K+ P+V T +A
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467
Query: 367 LLEGLKKNNQP 377
L++ + +P
Sbjct: 468 LIDAFCRAGKP 478
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + F M + G + V + N+ + + + + LME DI
Sbjct: 264 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS-ALLLMEEMTATGCLPDI 322
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ G +A + +M+ PDVITY+ LI F K R ++ L++
Sbjct: 323 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 382
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + P++ TF+ ++ N A +L+ M PD TY ++ GFC+ G
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A++V M R PN Y +I C+ G +AY + ++ + P+V T +
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502
Query: 367 LLEGL 371
L+ G
Sbjct: 503 LIGGF 507
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 18/275 (6%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+ +M GC + + N + L ++ ++ KF D+ +++
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYS 361
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC++ +D A + +M K V PDV+T++TL+ + + L MV
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P++ T+ + R +A +++ M + G +P+ VTY +I FCR+G +A
Sbjct: 422 DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM---------CKDSM-----KKN 356
K+ M+G + PN Y+++I C GD A M CK M +
Sbjct: 482 YKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMD 541
Query: 357 WVPSVDTISA---LLEGLKKNNQPCKANTIMALVQ 388
+ +SA LLE +K++ P + + +AL++
Sbjct: 542 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 576
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I C+ G LD+A + +M++ +PDV+T+T L+ K +R + +
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C PN+ T++ I L + A ++ M GIEP+ VTYN +I GFC +
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A + M +P+ Y T+I LC+ G A + D K P V T
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360
Query: 365 SALLEGLKK 373
S L+ G K
Sbjct: 361 SCLIGGFCK 369
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ ++ FC++G + +A V+ M K G +P+V+TYT LI AF + +P + L
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR-FGIEPDEVTYNLVIKGFCR 303
MV G PN+ T+ I +A K++ ++R + D Y +++ G CR
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCR 545
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSVD 362
+G + A ++ A+ P IY +I LCQ + A + ++ ++ + P+ +
Sbjct: 546 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 605
Query: 363 TISALLEGLKKNNQPCKANTI 383
A+++ L + + +AN +
Sbjct: 606 AYEAVIQELAREGRHEEANAL 626
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 12/392 (3%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKP----LEPPALVKLKA 56
M SL P+ H + A + AI N SL + +P + KP L P L L +
Sbjct: 1 MRSLIPSHH--HRFSTAISAAIVANTTTTPSLPQSYKIQPPI-KPWPHRLNPKLLSSLIS 57
Query: 57 -ERDPEKLFQLF--KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH-QKSLPQG 112
+ DP Q+F N H N ++ +L+ R F IE LL + S P
Sbjct: 58 RQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLLAGLRSSPPHC 117
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
E I+ ++ YG AG A+ TF + +G + +V+S+NA L L +++ +
Sbjct: 118 CGEEPIVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLV 177
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
E+F + ++ S NI++KA C+ ++ A V+ EM +G+ P+V++YTT++ F
Sbjct: 178 FKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFV 237
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ ++ +G P++ ++ V + + A ++M +M+ G+EP+EV
Sbjct: 238 WRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEV 297
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY ++I+ +C+ A + M+ + L+ ++ ++ LC+EG+ A M +
Sbjct: 298 TYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMV 357
Query: 353 MKKNW-VPSVDTISALLEGLKKNNQPCKANTI 383
+KN + +S L+ L K + +A +
Sbjct: 358 SRKNCGLNGAVVVSTLIHWLCKKGKVLEARNV 389
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 38/281 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A+ +M G V S L D+ EV ++ D+
Sbjct: 203 KGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDR-GWSPDV 261
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--------- 237
S+ +++ FC +G L A VM M+ GV+P+ +TY +I A+ K+ +
Sbjct: 262 TSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIED 321
Query: 238 ---------------------EIGN-----GLWNLMVCKGCFPNLATF-NVRIQHLVNKR 270
E GN +W ++ K C N A + I L K
Sbjct: 322 MIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKG 381
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A + + G +TYN +I G C G L A +++ M+ + + PN Y
Sbjct: 382 KVLEARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYN 440
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I C+ G+ + ++ ++ +P+ T + L++G+
Sbjct: 441 MLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGI 481
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 251 GCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P++ + N + LV NKR +RF + P+ V+ N+++K C+ +++
Sbjct: 150 GIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEV 209
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A KV M G L+PN Y T++ GD + A + ++ + + W P V + + L++
Sbjct: 210 AVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVD 269
Query: 370 GLKKNNQPCKANTIMALVQ 388
G + + A +M +++
Sbjct: 270 GFCRLGKLVDAIRVMDIME 288
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I CE G L +A + +M + GV P+ TY LI F K + G +
Sbjct: 401 LLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLE 460
Query: 246 LMVCKGCFPNLATFNVRIQH-LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
M+ C PN +T+ + I L+ + NK++ L G++ D +N+ +K
Sbjct: 461 EMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLAMSTGVDAD--LWNIFVK 513
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 9/326 (2%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEH-LLEHQKSLPQG 112
LK ++DP K +F + ++ + +L FD +E L+E + ++
Sbjct: 14 LKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNS 73
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
EG + M YG+ G ++ A+D F M Y C+ ++ S NA + +L E
Sbjct: 74 LLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKV 133
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ + + I D+ +F I IK+FC A ++ M G + + + Y T+IS FY
Sbjct: 134 YLRMKHE-GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFY 192
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++N L+N M+ G FP++ATFN + L K + KL+ + + G+ P+
Sbjct: 193 EENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLF 252
Query: 293 TYNLVIKGFCRSGHLDMA-KKVYSA------MLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
T+N+ I+G CR G L+ A KV A M+ + L P+ Y T+I+ + G A
Sbjct: 253 TFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA 312
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ KD+ K +VP T +L+ G+
Sbjct: 313 SRILKDAKFKGFVPDEFTYCSLIIGV 338
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 40/341 (11%)
Query: 88 SRLAGARRFDYIEHLLE-HQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLY 144
S + G + I+H L +++L +G + ++ ++ G + G++ A+ DM
Sbjct: 333 SLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE 392
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + N + L + + L K ++ DIF+FN +I +C+ +D
Sbjct: 393 GMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP-DIFTFNTLIDGYCKRLKMDN 451
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ M GV PDVITY ++++ K +PE + +++ KGC PN+ T+N+ I+
Sbjct: 452 AIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIE 511
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL----------------- 307
L R+ +A L+ ++ G+ PD V++ VI GFC +G L
Sbjct: 512 SLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRIC 571
Query: 308 -------------------DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
DMA+K++ M + P+ Y+ MI C+ G+ N Y
Sbjct: 572 HTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDF 631
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ +VPS+ T ++ L ++ +A I+ L+ R
Sbjct: 632 LLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVR 672
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ Y K G I+ A D G + + + + + D+ A E K
Sbjct: 299 IIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK- 357
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ I +N +IK + G++ KA +M +M K G+ PD+ TY +I+ K
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
N L N + KG P++ TFN I + + A ++ M G+ PD +TYN ++ G
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++ + + + ++ + +PN Y +I LC+ A + ++ + +P
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 361 VDTISALLEGLKKNNQ 376
+ ++ G N
Sbjct: 538 PVSFGTVISGFCNNGD 553
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 2/194 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I + ++G + A ++ + + G PD TY +LI +D + L+
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALF 351
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P++ +N I+ L + +A +LM M + G+ PD TYNLVI G C+
Sbjct: 352 EEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKM 411
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G + A + +A + + +P+ + T+I C+ + A I DSM + V P V T
Sbjct: 412 GCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNA-IGILDSMWSHGVTPDVIT 470
Query: 364 ISALLEGLKKNNQP 377
+++L GL K +P
Sbjct: 471 YNSILNGLCKAAKP 484
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++ +I C+ G +D A + E G+KP ++ Y TLI + L
Sbjct: 327 DEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLM 386
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G P++ T+N+ I L AN L+ G PD T+N +I G+C+
Sbjct: 387 NDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKR 446
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A + +M + P+ Y ++++ LC+ K M+K +P++ T
Sbjct: 447 LKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITY 506
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+E L K + +A ++ ++ R
Sbjct: 507 NILIESLCKARKVTEALDLLEEIRNR 532
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA + A+D ++ G S + + DL + +++ I +
Sbjct: 515 KARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTV 574
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I AF E +D A + EM G PD TY +I F K G
Sbjct: 575 ATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLK 634
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ G P+L TF I L + R +A ++ LM R G+ P+ V
Sbjct: 635 EIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 159 VLTESRD-LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
VL +D LKA+ F V ++ + ++ +I+ G D V++EM +L V
Sbjct: 13 VLKYQKDPLKALSIF-NSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEM-RLNV 70
Query: 218 KPDVI--TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
++ Y + + + + + + ++ M C P++ ++N + LV QA
Sbjct: 71 DNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQA 130
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+K+ M+ GI PD T+ + IK FCR+ A ++ + M + N +Y T+I
Sbjct: 131 HKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISG 190
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+E AY + ++ P + T + L+ L K
Sbjct: 191 FYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 9/300 (3%)
Query: 76 VIENKYAFEDTVSRLAGARRFDY---IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
++ N + ++ L RF I H +E SL + I++ + L G I+
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL---GGDIE 425
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
AM F M G TV + N + LT+ A A L+++ ++ + D +++N
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA--ARLLDLMKENGCEPDEWTYNE 483
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ F + G L+ A EM + G+ P+ ++YT LI KD + +I L M G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C PN+ ++N I L + R +A K+ M G+ P+ +TY +I G CR+G A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K++ M R+ +PN Y ++I+ LCQEG + A I+ K+ +K P T ++L++G
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ K M++ A + + M G + ++ + N + +L++ ++ + L ++ + +
Sbjct: 169 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-Y 227
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+F++ +I C LD A+ V M K G P+ +TY+TLI+ + R +
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M+ KG P + T+ + I L +A +L+ M++ G P+ TY +I G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
R G L++A +Y ML L+PN Y +I+ LC G F+ A
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 1/263 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G A+ F+ M +G ++ N +K L D++ L E K +
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV-LFEKMLKMGPLPTVV 444
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I + G ++ A ++ M++ G +PD TY L+S F K + E + + M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G PN ++ I + A L+ M+ G P+ +YN VI G +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+K+ M+ + L+PN Y T+I LC+ G A+ + D K+ +P++ T S+L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ GL + + +A ++ ++R+
Sbjct: 625 IYGLCQEGKADEAEILLKEMERK 647
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 3/241 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F M GC + + + L + L E+ EK I+ ++++ + I
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPI 310
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
A C + ++A ++ M+K G +P+V TYT LIS + + E+ GL++ M+ +G
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN T+N I L R A K+ M+ G + TYN +IKG C G ++ A +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLK 372
+ ML +P Y T+I+ +G+ N A + D MK+N P T + L+ G
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL-DLMKENGCEPDEWTYNELVSGFS 489
Query: 373 K 373
K
Sbjct: 490 K 490
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF---DYIEHLLEHQKSLPQGRR 114
+D E + Q F + N F ++RL R F D+I L+ + R
Sbjct: 86 KDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILM-----IKACRN 140
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
E I R+ A + + LY C + L A +++ +R+L
Sbjct: 141 EEEIRRV------ADFLNEISGMGFGFSLYSCNTLLIQL-AKFEMVEGARNLYKQML--- 190
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
IQ + +FN +I + G + +A L++ ++ + + PDV TYT+LI ++
Sbjct: 191 ----NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ G+++ MV +GC PN T++ I L N+ R +A ++ M GIEP TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
L I C H + A ++ + M R PN + Y +I L + G +A + +K
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 355 KNWVPSVDTISALLEGL 371
+ VP+ T +AL+ L
Sbjct: 367 EGLVPNTVTYNALINEL 383
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I C G +D+A ++ EM + G++P V TYT I+A E L M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+GC PN+ T+ I L + A L M + G+ P+ VTYN +I C G
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K++ M G + N + Y +I LC GD A ++ + +K +P+V T + L
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Query: 368 LEG-LKKNN 375
+ G L K N
Sbjct: 450 INGYLTKGN 458
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA-IQAFLMEVPEKFHIQ 183
+ K G ++ A +FY + C ++ + S+D K I L++ E+
Sbjct: 488 FSKWGKLESA--SFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ S+N VI + +A + +M + G+ P+VITYTTLI ++ R + +
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M + C PNL T++ I L + ++ +A L+ M+R G+ PDEVT+ +I GF
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 665
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G +D A + M+ PN + Y ++ L +E
Sbjct: 666 LGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V++ A + L+ L+ ++ ++ + + ++N +I C G
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP-NTVTYNALINELCVGGRFST 391
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + M+ G + TY +I E L+ M+ G P + T+N I
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ K A +L+ LM+ G EPDE TYN ++ GF + G L+ A + M+ L P
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
N Y +I ++G ++A + K + P+V++ +A++ GL K N+ +A I
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
E+ +G + + TL+ K E L+ M+ G P+L TFN I L K
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A ++ + ++ + PD TY +I G CR+ +LD+A V+ M+ PN Y
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
T+I+ LC EG + A M ++ ++K P+V T + + L +A ++A +++R
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 391 VPHFSSNQLSAFKSILSK 408
+ +A S LS+
Sbjct: 333 GCRPNVQTYTALISGLSR 350
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 134/275 (48%), Gaps = 2/275 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ +YG+A + A+ FY M +GC + K LN L++L R+ L +
Sbjct: 147 IIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNARHH 206
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + S+NI+I+AFC G + AY + +M + V PDV TY TL+ + N+
Sbjct: 207 GVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGLCRKNQVNGA 266
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L M+ KG P+ ++ + L K++ +A KL+ M+ G PD YN VI G
Sbjct: 267 VDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMG 326
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FCR G A K+ M +PN Y+++ + LC +G F LA ++ K + P
Sbjct: 327 FCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGFYPH 386
Query: 361 VDTISALLEGLKKNNQPCKANTIMA--LVQRRVPH 393
I AL++G + ++ +++ L + + PH
Sbjct: 387 FSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPH 421
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 66/146 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +N VI FC G A ++ +MQ G P++++Y +L + E+ G
Sbjct: 316 DIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYV 375
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG +P+ + + ++ + R ++ ++ M + G P T+ ++I G C
Sbjct: 376 EEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGICEV 435
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+V+ +L + + + +I +
Sbjct: 436 EDTAKFCEVWEKILKKDVRRDTRIVE 461
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 9/206 (4%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN---RPEIGNGLW 244
+F+ +IK + E + DKA V M G P ++ RP L+
Sbjct: 143 AFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPAFD--LF 200
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
G PN ++N+ I+ A L M + PD TY +++G CR
Sbjct: 201 KNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGLCRK 260
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMK-KNWVPSVD 362
++ A + ML + +P+ Y T+++ LC++ AY ++C+ MK K P +
Sbjct: 261 NQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCR--MKVKGCNPDIA 318
Query: 363 TISALLEGLKKNNQPCKANTIMALVQ 388
+ ++ G + + A I+ +Q
Sbjct: 319 HYNTVIMGFCREGRALDACKILEDMQ 344
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 2/250 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQ 183
Y + +I A+ + +G V S NA L S R++ + E+ E +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVS 202
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++F++NI+I+ FC G +D A + +M+ G P+V+TY TLI + K + + G L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M KG PNL ++NV I L + R + + ++ M R G DEVTYN +IKG+C+
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G+ A +++ ML L P+ Y ++IH +C+ G+ N A + P+ T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 364 ISALLEGLKK 373
+ L++G +
Sbjct: 383 YTTLVDGFSQ 392
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 20/279 (7%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A+ DM G V S + L S D+ E+ EK I+ D
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTI 486
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I+ FCE +A + EM ++G+ PD TYT LI+A+ + E L N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVI------- 298
V KG P++ T++V I L + R+ +A +L L++ F E P +VTY+ +I
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRL--LLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 299 --------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
KGFC G + A +V+ +MLG+ P+ Y MIH C+ GD AY + K
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ +K ++ T+ AL++ L K + + N+++ V R
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 189 FNIVIKAFCEMGILDKAYL------------------------------------VMVEM 212
F++V+K++ + ++DKA V EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ V P+V TY LI F ++ L++ M KGC PN+ T+N I R+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
KL+ M G+EP+ ++YN+VI G CR G + V + M R + Y T+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
I C+EG+F+ A +M + ++ PSV T ++L+ + CKA +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM------CKAGNM 361
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 4/257 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K I M L G + + S N + L +K + L E+ + +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY-SL 308
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +IK +C+ G +A ++ EM + G+ P VITYT+LI + K
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ + K +A +++ M G P VTYN +I G C +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A V M + L P+ Y T++ C+ D + A + ++ ++K P T
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 365 SALLEGL---KKNNQPC 378
S+L++G ++ + C
Sbjct: 489 SSLIQGFCEQRRTKEAC 505
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++ F + G +++AY V+ EM G P V+TY LI+ + E + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P++ +++ + +A ++ M GI+PD +TY+ +I+GFC
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A +Y ML L P+ Y +I+ C EGD A + + ++K +P V T S L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 368 LEGLKKNNQPCKANTIM 384
+ GL K ++ +A ++
Sbjct: 562 INGLNKQSRTREAKRLL 578
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 150/308 (48%), Gaps = 23/308 (7%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------LYGK 127
T L AR + Y + +L+H G F+ ++M +Y +
Sbjct: 60 TTHVLVKARLYGYAKSILKHLAQKNSG--SNFLFGVLMDTYPLCSSNPAVFDLLIRVYLR 117
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
GM+ HA++TF M + G K +V + N + + ++ + +F ++ + ++
Sbjct: 118 QGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTS-RVCPNVS 176
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
SFNI+I C G L KA ++ M++ G P +++Y TL+S K R + L + M
Sbjct: 177 SFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM 236
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
CKG ++ T+N+ I L RS Q ++ M+ I P+EV+YN +I GF + G +
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKI 296
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISA 366
+A +V++ M+ L PN Y +I+ C G+F A + D M+ N V P+ TI
Sbjct: 297 GVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA-LRVLDVMEANDVRPNEVTIGT 355
Query: 367 LLEGLKKN 374
LL GL K+
Sbjct: 356 LLNGLYKS 363
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G +K A++ M G T+ S N L + K + + K IQ D+ +
Sbjct: 189 GKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECK-GIQADVCT 247
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+ I + C + YLV+ +M+ + P+ ++Y TLI+ F K+ + + ++N M+
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI 307
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PNL T+N+ I +A +++ +M+ + P+EVT ++ G +S D
Sbjct: 308 ELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFD 367
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG----DFNLAYIMCKDSMKKNWVPSVDTI 364
+A+ + R N + MI LC+ G F L MCKD + P + T
Sbjct: 368 VARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVH----PDIITF 423
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPH 393
S L+ G K KA +M+ + R VP+
Sbjct: 424 SVLINGFCKVGNINKAKEVMSKIYREGFVPN 454
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 84/157 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI+I +C G ++A V+ M+ V+P+ +T TL++ YK + ++ +
Sbjct: 314 NLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + V I L +A +L+ M + G+ PD +T++++I GFC+
Sbjct: 374 ERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKV 433
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G+++ AK+V S + +PN I+ T+I+ C+ G+
Sbjct: 434 GNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGN 470
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ N ++ + CE G L +A + + ++G+ P+ +T+ +I+ + ++
Sbjct: 489 DNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVF 548
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T+ ++ L + W+A KL+ + + D ++YN +I +S
Sbjct: 549 DRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKS 608
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A +++ M+ ++P+ Y ++ L +EG A+I M+K + ++++I
Sbjct: 609 GNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE-ILTLNSI 667
Query: 365 --SALLEGLKKNNQP 377
+ ++GL K Q
Sbjct: 668 VYTCFIDGLFKAGQS 682
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+ + G++ A M G KP V T ++++ K+ R + + M+
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQML 167
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN+++FN+ I L + + +A ++ +M+R G P V+YN ++ C+ G
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M + + + Y I LC+ Y++ K K P+ + + L+
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287
Query: 369 EGLKKNNQ 376
G K +
Sbjct: 288 NGFVKEGK 295
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
FL + +K + + + I + G A + EM++ G+ D+I ++ +
Sbjct: 652 FLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGY 711
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + + L + K PNL TFN+ + + KL LM+R G P+
Sbjct: 712 SRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNR 771
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+TY+ +I G C G L++ K+ + + + +I C+ D +
Sbjct: 772 LTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D +++ ++ G L A++ + MQK + + I YT I +K + + L
Sbjct: 629 DSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYL 688
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG +L N + + A+ L+ + + P+ T+N+++ G+ R
Sbjct: 689 FKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR 748
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ K+Y+ M PNR Y ++I LC G L M K
Sbjct: 749 GQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++K C +G + A+ + +M LG+ D ++ + E + M+
Sbjct: 882 MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P +TF + K +A+ L LM+ + ++ D V YN++I C +G + A
Sbjct: 942 KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y + + L+PN Y+ ++ + + + I+ KD + V S L+G
Sbjct: 1002 DFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV------SGYLDG- 1054
Query: 372 KKNNQPCK 379
K+ + C+
Sbjct: 1055 -KSQKSCR 1061
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 28/261 (10%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--- 181
Y G A F M G + + + LKVL + ++ + L +K H
Sbjct: 535 YANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL----KKLHCIP 590
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D S+N +I + G L +A + EM + + PD TYT ++S ++ R
Sbjct: 591 LAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR----- 645
Query: 242 GLWNLMVCKGCFP-----------NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+VC F N + I L +S A L M+ G+ D
Sbjct: 646 -----LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ N + G+ R G + A + S + ++PN + ++H + D + +
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760
Query: 351 DSMKKNWVPSVDTISALLEGL 371
+ + P+ T +L+ GL
Sbjct: 761 LMRRSGFFPNRLTYHSLILGL 781
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 125/342 (36%), Gaps = 57/342 (16%)
Query: 114 REGFI----MRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
REGF+ + ++Y K G + AM + M+L G + N+ + L E+ L
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ FL + + + + +F+ +I + +G A+ V M G P TY +L
Sbjct: 508 EAEEFLHHI-SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSL 566
Query: 228 ISAFYKDNRPEIGNGLWN---LMVCKGCFP---NLATFNVRIQHLVNKRRSWQANKLMGL 281
+ K G W L+ C P + ++N I + +A +L
Sbjct: 567 LKVLCK------GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEE 620
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP-NRKIYQTMIHYLCQEG 340
M + I PD TY ++ G R G L A ++ + ++ N +Y I L + G
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAG 680
Query: 341 DFNLAYIMCKD-----------------------------------SMKKNWVPSVDTIS 365
A + K+ + KN +P++ T +
Sbjct: 681 QSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFN 740
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
LL G + + L++R F N+L+ IL
Sbjct: 741 ILLHGYSRGQDIMSCFKLYNLMRR--SGFFPNRLTYHSLILG 780
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 5/181 (2%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
+K ++ F+ E D +FN++I+ CE+ LDK + M+ V D T
Sbjct: 791 IKMLKMFIAESS-----TIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQK 845
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+ + + + M+ KG P + ++ + A KL M
Sbjct: 846 AVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVAL 905
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI D+ +++G G ++ A + ML + +P + T++H C++ +F A
Sbjct: 906 GISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEA 965
Query: 346 Y 346
+
Sbjct: 966 H 966
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 155/349 (44%), Gaps = 20/349 (5%)
Query: 44 KPLEPPALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEH 101
K P +L++ +E P+ + FK I N F + LA A+ ++ I
Sbjct: 69 KETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA 128
Query: 102 LLE--------------HQKSL--PQGRREGFIMRIMML-YGKAGMIKHAMDTFYDMHLY 144
LL+ H S+ G I+ +++ Y K G + A++ F Y
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDY 188
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + S N L L + + +++ E+ + I ++ +F++VI C++G K
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVNVVTFDVVINGLCKVGKFQK 247
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V+ +M+ G P VITY T+I + K + + L MV K PN TFN+ I
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
A K+ MQR G++P+ VTYN +I G C +G LD A + M G L P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
N Y +I+ C++ A M D K+ P+V T + L++ K
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D DM +G +V + N + ++ + A L E+ K I +
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNE 299
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I FC + A V EMQ+ G++P+V+TY +LI+ + + + GL +
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ T+N I K+ +A +++ + + G+ P+ +T+N +I + ++G
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + S ML + PN Y +I C+EG+ A + K+ + T +
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 367 LLEGLKKNNQPCKA 380
L++ L K + KA
Sbjct: 480 LVDALCKKGETRKA 493
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 20/237 (8%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ M G K V + NA + + + LK + L ++ ++ + ++ +
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR-GLAPNVIT 406
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I A+ + G +D A+L+ M GV P+V TY LI F ++ + L M
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKL---MGLMQRFGIEPDEVTYNLVIKGFCRSG 305
G +L T+N+ + L K + +A +L M LM++ G + VTYN++IKGFC G
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKG 526
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
L+ A ++ + ML + L+PNR Y I+ + M+K ++P +D
Sbjct: 527 KLEEANRLLNEMLEKGLIPNRTTYD----------------ILRDEMMEKGFIPDID 567
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F +M G + V + N+ + L + L L + ++ ++ ++N
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG-LQDKMSGMGLKPNVVTYN 373
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC+ +L +A ++ ++ K G+ P+VIT+ TLI A+ K R + L ++M+
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN++T+N I + +A KL M+ G++ D VTYN+++ C+ G A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Query: 311 KKVYSAML-----GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ M GRR N Y +I C +G A + + ++K +P+ T
Sbjct: 494 VRLLDEMTLMEKKGRR--ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 551
Query: 366 AL 367
L
Sbjct: 552 IL 553
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 92/187 (49%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
++++ A+ + G +D A G + ++ ++ + K+ R + ++ M+
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+ N+ TF+V I L + +A ++ M+ +G P +TYN +I G+C++G +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M+ +R+ PN + +I C++ + A + ++ ++ P+V T ++L+
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342
Query: 370 GLKKNNQ 376
GL N +
Sbjct: 343 GLCSNGK 349
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+G ++ N ++ + G + + + VY M+ RR+ N + +I+ LC+ G F
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
A + +D + PSV T + +++G K + KA+ ++ +V +R+
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI 295
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+R G+ + VT+++VI G C+ G A V M P+ Y T+I C+ G
Sbjct: 223 RRIGV--NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
A + K+ + K P+ T + L++G ++ A + +QR+
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M L+G V SLN + L + + L ++ K IQ D +FN +I C G
Sbjct: 118 MDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMF-KLGIQPDAITFNTLINGRCIEG 176
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ +A + EM + G +PDVI+Y+T+I+ K + L M KGC PNL +
Sbjct: 177 EIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYT 236
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L A L+ M GI PD VTY+ ++ GFC GHL+ A +++ M+GR
Sbjct: 237 TIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+MPN + ++ LC+EG + A + + KK P+ T +AL++G NNQ +A
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356
Query: 381 NTIMALV 387
++ ++
Sbjct: 357 QKVLDIM 363
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K GM+ A F M G + + NA + + + Q L + +K +
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV-V 372
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+NI+I +C+ LD+A ++VEM + + PD +TY+TL+ + RP+ L+
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P+L T++ + L +A KL+ MQ IEPD V YN++I+G +G
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L++AK+++S + + P + Y MI L +EG + AY + + ++P+ + +
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+++G +N ++T + L+ V S S F+ +L
Sbjct: 553 IIQGFLQNQD---SSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G A+ M GCK + + + L + + L E+ ++ I D+
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR-GIPPDV 267
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ FC +G L++A ++ EM V P+ +T+T L+ K+ ++
Sbjct: 268 VTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEA 327
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PN T+N + + +A K++ +M G P +YN++I G+C+
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD AK + M + L P+ Y T++ LCQ G A + K+ +P + T S
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 367 LLEGLKKNNQ 376
LL+GL K+
Sbjct: 448 LLDGLCKHGH 457
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ AMD +M G V + + L L E+ + ++ +
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR-NVMPNT 302
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F I++ C+ G++ +A V M K G +P+ TY L+ + +N+ + + ++
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC P + ++N+ I +RR +A L+ M + PD VTY+ +++G C+ G
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A ++ M L+P+ Y T++ LC+ G + A + K + P + +
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482
Query: 367 LLEGL 371
L+EG+
Sbjct: 483 LIEGM 487
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 155/349 (44%), Gaps = 20/349 (5%)
Query: 44 KPLEPPALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEH 101
K P +L++ +E P+ + FK I N F + LA A+ ++ I
Sbjct: 69 KETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA 128
Query: 102 LLE--------------HQKSL--PQGRREGFIMRIMML-YGKAGMIKHAMDTFYDMHLY 144
LL+ H S+ G I+ +++ Y K G + A++ F Y
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDY 188
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + S N L L + + +++ E+ + I ++ +F++VI C++G K
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVNVVTFDVVINGLCKVGKFQK 247
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V+ +M+ G P VITY T+I + K + + L MV K PN TFN+ I
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
A K+ MQR G++P+ VTYN +I G C +G LD A + M G L P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
N Y +I+ C++ A M D K+ P+V T + L++ K
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D DM +G +V + N + ++ + A L E+ K I +
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNE 299
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I FC + A V EMQ+ G++P+V+TY +LI+ + + + GL +
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ T+N I K+ +A +++ + + G+ P+ +T+N +I + ++G
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + S ML + PN Y +I C+EG+ A + K+ + T +
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 367 LLEGLKKNNQPCKA 380
L++ L K + KA
Sbjct: 480 LVDALCKKGETRKA 493
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 151/342 (44%), Gaps = 2/342 (0%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
P LV L E + ++K RI + N F+ ++ L +F ++E K+
Sbjct: 199 PMLVSLVKEGRIGVVESVYKEMIRRRIGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
I+ Y KAG + A +M + N + ++ A
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ E+ ++ +Q ++ ++N +I C G LD+A + +M +G+KP+V+TY LI
Sbjct: 318 AKKVFEEM-QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F K + + + + +G PN+ TFN I R A L +M G+
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ TYN +I GFCR G++ A+K+ M G L + Y ++ LC++G+ A +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + PS T +AL++G + A + L++++
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKK 538
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ M G K V + NA + + + LK + L ++ ++ + ++ +
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR-GLAPNVIT 406
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I A+ + G +D A+L+ M GV P+V TY LI F ++ + L M
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G +L T+N+ + L K + +A +L+ M G+ P +TYN +I G+ R G+
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST 526
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A V + M + N Y +I C +G A + + ++K +P+ T L
Sbjct: 527 AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F +M G + V + N+ + L + L L + ++ ++ ++N
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG-LQDKMSGMGLKPNVVTYN 373
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC+ +L +A ++ ++ K G+ P+VIT+ TLI A+ K R + L ++M+
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN++T+N I + +A KL M+ G++ D VTYN+++ C+ G A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAYIMCKDSMKKNWVPSVDTISA 366
++ M L P+ Y +I +EG+ N+ +M K + N V T +
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIV----TYNV 549
Query: 367 LLEGLKKNNQPCKANTIM 384
L++G + +AN ++
Sbjct: 550 LIKGFCNKGKLEEANRLL 567
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 92/187 (49%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
++++ A+ + G +D A G + ++ ++ + K+ R + ++ M+
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+ N+ TF+V I L + +A ++ M+ +G P +TYN +I G+C++G +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M+ +R+ PN + +I C++ + A + ++ ++ P+V T ++L+
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342
Query: 370 GLKKNNQ 376
GL N +
Sbjct: 343 GLCSNGK 349
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+G ++ N ++ + G + + + VY M+ RR+ N + +I+ LC+ G F
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
A + +D + PSV T + +++G K + KA+ ++ +V +R+
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI 295
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E L +LK E D + FK+ A+++ ++ + +LA R D +++LL+
Sbjct: 43 EADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM 102
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K E + ++ Y +AG + A+ TFY M + K TVK N L L +
Sbjct: 103 KLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF 162
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ I + +K ++ ++F++NI++KA C+ +D A+ ++VEM G PD ++YTT
Sbjct: 163 QMINPIYSNM-KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LIS+ K + + L P++ +N I + + +A +L+ M G
Sbjct: 222 LISSLCKLGKVKEARELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I+P+ ++Y +I +G+++++ V + M R PN + ++I +G + A
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 347 IMCKDSMKKNWVPSVDTISALLEGL 371
+++ VP+V +AL+ GL
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGL 361
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ F M + GC V++ +A + ++ DL A + + + H ++ ++ +
Sbjct: 370 AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP--NVVAYTCM 427
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C + ++AY ++ MQ P+ +T+ T I R + +++ M GC
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FPN T+N + L+ RR +A L+ M+ GIE + VTYN +I G+C +G L A +
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M+ R P+ +I C++G N+A + W P + ++L+ G+
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I ++ S+ +I A + G ++ + V+ +M G P++ T+T+LI F+
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
W+ M+ +G PN+ +N + L +KR A + M+ G P+ TY+ +I G+
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++G LD A +V++ M+ PN Y M+ LC+ FN AY + ++ +N P+
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456
Query: 362 DTISALLEGL 371
T + ++GL
Sbjct: 457 VTFNTFIKGL 466
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N ++ C L A V +M+ G P+V TY+ LI + K + + +W
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ GC PN+ + + L QA L+ MQ P+ VT+N IKG C S
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G +D A KV+ M PN Y ++ L ++ F A+ + KD
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
Y KAG + A + + M +GC V + + VL R+ QA+ L+E + +
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC--RNSMFNQAYCLIENMQVENCP 453
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +FN IK C G +D A V +M G P+ TY L+ + KD R GL
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M +G NL T+N I +A +L+G M G +PD +T N+VI +C+
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +++A ++ + + P+ Y ++I +C A + + + + P+V T
Sbjct: 574 QGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Query: 364 ISALLEGLKKN 374
+ L+ L N
Sbjct: 634 WNVLVRHLFSN 644
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ + I+ L ++R L+ M+ GI E + VI + R+G + A K + M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
R+ P KIY ++ L E F + + + K P+V T + LL+ L KNN+
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 4/286 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
Y G + A+ DM G TV + N + L D +A A+ ++E +K
Sbjct: 229 YCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALF--MDARASDAYAVLEEMQKNGFS 286
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F++NI+I +C+ G KA V EM + GV+ +TYT+LI F + + + + L
Sbjct: 287 PDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N+ V KG P++ +N I +A ++M M++ I PD++TYN +++GFC
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD A+ + M R + P+ Y T+I +GD A + + M K + P++ T
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466
Query: 364 ISALLEGLKKNNQPCKANTIM-ALVQRRVPHFSSNQLSAFKSILSK 408
+AL++GL K Q A +M +V + + S +S + + ++
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G K A++ F +M G + T + + + V + ++ L V K I+
Sbjct: 299 YCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDR-LFNVAVKKGIRP 357
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +N +I + C G +++AY +M EM+K + PD +TY TL+ F R + L
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+L ++N I K A ++ M G P +TYN +I+G C+
Sbjct: 418 DEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKI 477
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A+ + M+ + + P+ Y ++I L E +
Sbjct: 478 RQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N VI FC G + A VM EM ++ G+ PD TY TLIS + K R E +++
Sbjct: 149 TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDE 208
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG + P V YN +I G+C G
Sbjct: 209 MLTKG----------------------------------EVAPSAVMYNALIGGYCDVGK 234
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD+A + M+ R + Y ++H L + + AY + ++ K + P V T +
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294
Query: 367 LLEGLKKNNQPCKA 380
L+ G K KA
Sbjct: 295 LINGYCKEGNEKKA 308
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E L +LK E D + FK+ A+++ ++ + +LA R D +++LL+
Sbjct: 43 EADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM 102
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K E + ++ Y +AG + A+ TFY M + K TVK N L L +
Sbjct: 103 KLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF 162
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ I + +K ++ ++F++NI++KA C+ +D A+ ++VEM G PD ++YTT
Sbjct: 163 QMINPIYSNM-KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LIS+ K + + L P++ +N I + + +A +L+ M G
Sbjct: 222 LISSLCKLGKVKEARELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG 276
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I+P+ ++Y +I +G+++++ V + M R PN + ++I +G + A
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 347 IMCKDSMKKNWVPSVDTISALLEGL 371
+++ VP+V +AL+ GL
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGL 361
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ F M + GC V++ +A + ++ DL A + + + H ++ ++ +
Sbjct: 370 AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP--NVVAYTCM 427
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C + ++AY ++ MQ P+ +T+ T I R + +++ M GC
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FPN T+N + L+ RR +A L+ M+ GIE + VTYN +I G+C +G L A +
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M+ R P+ +I C++G N+A + W P + ++L+ G+
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I ++ S+ +I A + G ++ + V+ +M G P++ T+T+LI F+
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
W+ M+ +G PN+ +N + L +KR A + M+ G P+ TY+ +I G+
Sbjct: 337 DFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++G LD A +V++ M+ PN Y M+ LC+ FN AY + ++ +N P+
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456
Query: 362 DTISALLEGL 371
T + ++GL
Sbjct: 457 VTFNTFIKGL 466
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N ++ C L A V +M+ G P+V TY+ LI + K + + +W
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ GC PN+ + + L QA L+ MQ P+ VT+N IKG C S
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G +D A KV+ M PN Y ++ L ++ F A+ + KD
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
Y KAG + A + + M +GC V + + VL R+ QA+ L+E + +
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC--RNSMFNQAYCLIENMQVENCP 453
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +FN IK C G +D A V +M G P+ TY L+ + KD R GL
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M +G NL T+N I +A +L+G M G +PD +T N+VI +C+
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +++A ++ + + P+ Y ++I +C A + + + + P+V T
Sbjct: 574 QGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Query: 364 ISALLEGLKKN 374
+ L+ L N
Sbjct: 634 WNVLVRHLFSN 644
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ + I+ L ++R L+ M+ GI E + VI + R+G + A K + M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
R+ P KIY ++ L E F + + + K P+V T + LL+ L KNN+
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
>gi|147778708|emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 46 LEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P ++K+ R+PE + + + + N+ + +++LA AR FD IE +++
Sbjct: 50 LSPREVLKIFDGLRNPESVMPVLDSVCKRKDFKPNEALYTLVINKLAQARMFDAIEDVIK 109
Query: 105 HQKSLPQGR-REGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
K Q R + F ++ +YG AG A++T +DM + C +VK+ N L +L
Sbjct: 110 TLKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVS 169
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ + PE ++ D NI++K C G +D A ++ E K +P+V
Sbjct: 170 AKRFDVVHKVYAGAPE-LGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVR 228
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T++TL+ + R E GL M +G +P+ FN+ I L + R + +L+G M
Sbjct: 229 TFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRM 288
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G P+ +Y V+ G +G AK+ M+ + P+ Y+ +I+ LC+E
Sbjct: 289 KLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLV 348
Query: 343 NLAYIMCKDSMKKNWVP 359
+ K +++ +VP
Sbjct: 349 ADVVWILKQMVEQGFVP 365
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P++ TFN+ + LV+ +R +K+ G+E D N+++KG CRSG++D A
Sbjct: 153 CWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAAC 212
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ +R PN + + T++H LC+ G A + + ++ P + L+ GL
Sbjct: 213 ELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL 272
Query: 372 KKNNQ 376
+K +
Sbjct: 273 RKRGR 277
>gi|242074342|ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 5/329 (1%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYA-FEDTVSRLAGARRFDYIEHLL 103
L P ++K+ A RDP + +FK A +RI + A + + +LA ARRF +E LL
Sbjct: 36 LAPNEVLKIFANIRDPSLINSVFK-KACSRIDYKPSEALYSLMIDKLAFARRFSDVEELL 94
Query: 104 EHQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
K+ + F R++ +YG A + A+DT + M Y C + K+ N L +L
Sbjct: 95 SKAKTEKLRFSDEFFYRLIKMYGNVAEHPQKAIDTLFAMPGYNCWPSTKTFNYVLHMLVC 154
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
R + + P + + D SFNI++K C+ D+A ++ EM K G +P+V
Sbjct: 155 KRQYEVVHEIYSSAP-RLGVTLDTCSFNILVKGLCQCSKFDEAISLLHEMPKQGCQPNVA 213
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TY+T + + + + L+ M + + +N+ I L + R +A L M
Sbjct: 214 TYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCREERVSEAFDLFKSM 273
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G P+ TY +++ G G AK + S M + P+ + Y+ +I LC E
Sbjct: 274 TSEGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMSTEGVRPSFQSYKLLIDGLCSEDCV 333
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A+++ K + + +VP + T + LL +
Sbjct: 334 DDAHLVLKQMVGQGFVPRMGTWTKLLTSI 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P+ TFN + LV KR+ +++ R G+ D ++N+++KG C+ D A
Sbjct: 138 CWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAI 197
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M + PN Y T +H+LCQ + A+ + + K++ + L+ GL
Sbjct: 198 SLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGL 257
Query: 372 KKNNQPCKA 380
+ + +A
Sbjct: 258 CREERVSEA 266
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 8/331 (2%)
Query: 46 LEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
+ P L KL + D E ++FK + + + + +L A F I+ LL
Sbjct: 69 ITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLL 128
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTES 163
K RE + IM YG+AG+ A DM +Y C+ + +S N L VL
Sbjct: 129 QMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVG 188
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
++ K + + ++F +V+KA C + +D A L++ +M K G P+ +
Sbjct: 189 NCPSVASNVFYDMLSK-GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMI 247
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y TLI A K +R + L M GC P++ TFN I R + KL+ M
Sbjct: 248 YQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMI 307
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G P+++TY ++ G C++ +D A+ + S + G PN + T+++ + G N
Sbjct: 308 LKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLN 363
Query: 344 LAYIMCKDSMKKN-WVPSVDTISALLEGLKK 373
A D M N +VP V T S L+ GL K
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I A+D F +M GCK + + N+ + L +++ A ++ + I +
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I AF G + +A ++ +M G D ITY LI A K E G GL+
Sbjct: 524 -TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P++ T N+ I + A + M M G PD VTYN +I G C+ G
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ + + P+ Y T+I +LC+EG F+ A + ++ +VP+ T +
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNI 702
Query: 367 LLEGLKKNNQ 376
L+ K +
Sbjct: 703 LVYNFGKQSN 712
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G+ A++ DM GCK + + + + L+ L E+ K +
Sbjct: 394 KKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK-GFSLNT 452
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I A C+ G + +A + EM G KPD+ T+ +LI + + E L+
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +G N TFN I + + +A KL+ M G DE+TYN +IK C++G
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGA 572
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ ++ M+ + L P+ +I+ C G + A +D + + + P + T ++
Sbjct: 573 VEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS 632
Query: 367 LLEGLKK 373
L+ GL K
Sbjct: 633 LINGLCK 639
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+F+ ++ C+ G+ A ++ +M G KP++ TYT LI F K + E +
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG N +N I L + +A + G M G +PD T+N +I G CR
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A +Y M+ ++ N + T+IH + G+ A + D + + T
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560
Query: 365 SALLEGLKKNN 375
+ L++ L K
Sbjct: 561 NGLIKALCKTG 571
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 46/256 (17%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG-ILDKAYLV--- 208
++ ALK+L E FLM P D+ +FN VI FC + +L+ A LV
Sbjct: 261 VDEALKLLEE--------MFLMGCPP------DVNTFNTVIYGFCRLNRVLEGAKLVDRM 306
Query: 209 ------------------------MVEMQKLGVK---PDVITYTTLISAFYKDNR-PEIG 240
+ E Q L K P+V+ + TL++ F ++ R E
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEAT 366
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+++ M+ G P++ TF+ + L K A +L+ M G +P+ TY ++I G
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC+ G L+ A + ML + N Y +I LC+ G + A M + K P
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486
Query: 361 VDTISALLEGLKKNNQ 376
+ T ++L+ GL + ++
Sbjct: 487 IFTFNSLIFGLCRVDE 502
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P+ ++NV + LV A+ + M G+ P++ T+ LV+K C +D A
Sbjct: 171 CEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC 230
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M +PN IYQT+I L + + A + ++ P V+T + ++ G
Sbjct: 231 LLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290
Query: 372 KKNNQPCKANTIMA---LVQRRV-PHFSSNQLS 400
C+ N ++ LV R + F+ N ++
Sbjct: 291 ------CRLNRVLEGAKLVDRMILKGFTPNDMT 317
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 15/386 (3%)
Query: 5 RPNRRFCHTAAAAAADAIALNNIRAVSL---NKFPNREPLVDKP--LEPPALVKLKA-ER 58
RP RR H + AAA AI N++ A + + F + P+ P L P L L + +
Sbjct: 8 RPPRRKLHPFSTAAAAAITANSVPAAAALPSSSFRIQPPIYPWPRRLTPHNLASLISRQH 67
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
DP+ Q+F +AH + +L+ ARRF ++E LL H LP E +
Sbjct: 68 DPDLSLQIFH-HAHPSLS-HAPQPLHALFLKLSRARRFYHLESLLTH---LPNPPPEPPL 122
Query: 119 MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
++ YG AG A+ F G V+SLNA L L +++ + + E
Sbjct: 123 TTLIRAYGLAGKPLSALRIFLKFQPLG----VRSLNALLNALVQNKRHRLAHSVFKSSTE 178
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
KF + ++ S NI++KA C+ +D A V+ EM +G+ P+V++Y+T++ F E
Sbjct: 179 KFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDME 238
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++ ++ KG P++ ++ V + + A ++M LM+ ++P EVTY ++I
Sbjct: 239 SAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMI 298
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+ +C+ A + M+ + L+P+ + ++ LC+EG A + + ++K W
Sbjct: 299 EAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWR 358
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+S ++ L K + +A ++
Sbjct: 359 VGGAVVSTIVHWLCKEGKVVEARGVL 384
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 37/273 (13%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+ +M L G V S + L D+++ E+ +K + D+ S+ +++
Sbjct: 205 AVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMP-DVTSYTVLM 263
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC +G L A +M M++ V+P +TY +I A+ K +P L MV KG
Sbjct: 264 SGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLV 323
Query: 254 PNLATFNVRIQHLVNK---------------RRSWQAN------------KLMGLMQRFG 286
P+ + ++ L+ + R+ W+ K +++ G
Sbjct: 324 PS-SVLCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARG 382
Query: 287 I----EPDEV----TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ E EV TYN +I G C G L A +++ M+ + +PN Y ++ C+
Sbjct: 383 VLDELEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCK 442
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
GD A + ++ ++ +P+ T S L++G+
Sbjct: 443 VGDVKEAIRVLEEMVESGCLPNKSTFSILVDGI 475
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
V+ CE G +++A V + + G + +T++ K+ + G+ + + KG
Sbjct: 332 VVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELE-KG 390
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
+L T+N I + + + +A +L M G P+ TYN+++KGFC+ G + A
Sbjct: 391 EVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAI 450
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+V M+ +PN+ + ++ + G
Sbjct: 451 RVLEEMVESGCLPNKSTFSILVDGISLSG 479
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
A N +Q NKR + ++F + P+ V+ N+++K C+ +D+A +V
Sbjct: 155 ALLNALVQ---NKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDE 211
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
M L+PN Y T++ +GD A + + + K W+P V + + L+ G + +
Sbjct: 212 MSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGK 271
Query: 377 PCKANTIMALVQ 388
A +M L++
Sbjct: 272 LVDAIRMMDLME 283
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 2/317 (0%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF 117
RD + +FK R ++ + + RLA ARRF +E LL ++ + F
Sbjct: 49 RDTSLINSVFKKACSRRDYKPSEALYSLMIDRLACARRFSDVEELLSKARTEKLRFSDEF 108
Query: 118 IMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
R++ +YG A + AMDT + M Y C + K+ N L +L R + +
Sbjct: 109 FYRLIKMYGNVAEHPQKAMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSA 168
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P + + D SFNI++K C+ G D+A ++ EM K G +P+ TY+T + + ++
Sbjct: 169 P-RLGVTLDTCSFNILVKGLCQYGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQ 227
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ L+ M + + +N+ I L R +A L M G P+ TY +
Sbjct: 228 VDKAFELFERMRKQDIAADTVVYNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQV 287
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ G G L AK + M + P+ + Y+ +I LC + A+++ K + +
Sbjct: 288 LLDGLISLGKLFEAKSLVCTMSTEGVRPSFQSYKLLIDGLCSDDCVGDAHLVLKQMVGQG 347
Query: 357 WVPSVDTISALLEGLKK 373
+VP + T + LL + K
Sbjct: 348 FVPRMGTWTKLLTSMFK 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P+ TFN + LV KR+ +++ R G+ D ++N+++KG C+ G D A
Sbjct: 138 CWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAI 197
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M + PN Y T +H+LCQ + A+ + + K++ + L+ GL
Sbjct: 198 SLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVVYNILISGL 257
Query: 372 KKNNQPCKA 380
++ + +A
Sbjct: 258 CRDERVTEA 266
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 3/321 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL-EHQKSLPQG 112
+K +++P K ++F + ++ + +L F+ +E +L E + ++ G
Sbjct: 14 VKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNG 73
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
EG + M YG+ G I+ A+D F M + C+ +V+S NA + +L E R
Sbjct: 74 LLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKV 133
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
M + +K I D+++F I +K+FC A ++ M G + + Y T+I FY
Sbjct: 134 YMRMRDK-GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFY 192
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++N + L+ M+ G P++ FN I L K ++ +L+ + + G+ P+
Sbjct: 193 EENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLF 252
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
T N+ I+GFC+ L+ A ++ +GR L P+ Y T+I LC+ A +
Sbjct: 253 TVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKM 311
Query: 353 MKKNWVPSVDTISALLEGLKK 373
+ + + P T +++++G K
Sbjct: 312 VNEGYEPDGFTYNSIIDGYCK 332
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 39/304 (12%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+++ +G + ++ ++ G + G+I A+ +M GC + + N + L +
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKI 438
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ +++ K H+ D+F+FN +I +C+ LD A ++ M GV PDVIT
Sbjct: 439 GCVSDADNLVIDAIAKGHLP-DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVIT 497
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y ++++ K + E G + LM+ KGC PN+ T+N+ + R+ +A L+ MQ
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLD----------------------------------- 308
G+ PD V + ++KGFC +G LD
Sbjct: 558 NKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNM 617
Query: 309 -MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
MA+K+++ M P+ Y+ MI C+ G+ N Y ++K +PS+ T +
Sbjct: 618 NMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRV 677
Query: 368 LEGL 371
L L
Sbjct: 678 LNCL 681
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I +C++G++ A ++ + G PD TY +LI+ +D + ++
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + KG PNL N ++ L + QA KLM M G PD TYNLVI G C+
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKI 438
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G + A + + + +P+ + T+I C++ + A I D M + V P V T
Sbjct: 439 GCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA-IEIVDRMWNHGVSPDVIT 497
Query: 364 ISALLEGLKK 373
+++L GL K
Sbjct: 498 YNSILNGLCK 507
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 7/280 (2%)
Query: 100 EHLLEHQKSLPQGRR-EGFIMR-IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
EH L +K + +G +GF I+ Y K GM+++A D G + + +
Sbjct: 305 EHYL--RKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI 362
Query: 158 KVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L + D+ +AI F E EK ++ ++ N ++K + G++ +A +M EM + G
Sbjct: 363 NGLCQDGDIDRAINVF-NEAMEK-GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
PD+ TY +I+ K + L + KG P++ TFN I K + A
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAI 480
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+++ M G+ PD +TYN ++ G C++G + + M+ + +PN Y +
Sbjct: 481 EIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESF 540
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
C+ A + ++ K P V L++G N
Sbjct: 541 CKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 120/250 (48%), Gaps = 4/250 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + +A++ M +G V + N+ L L ++ + + + EK +
Sbjct: 470 YCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP- 528
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++NI+ ++FC+ +++A ++ EMQ G+ PDV+ + TL+ F + + L+
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588
Query: 245 NLMVCKGCFPN-LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ + F + +AT+N+ I K A KL M G PD TY ++I GFC+
Sbjct: 589 KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G+++ + + L+P+ + +++ LC + + A + + K VP V
Sbjct: 649 TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV-- 706
Query: 364 ISALLEGLKK 373
++ + E KK
Sbjct: 707 VNTIFEADKK 716
>gi|224056581|ref|XP_002298921.1| predicted protein [Populus trichocarpa]
gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 5/298 (1%)
Query: 46 LEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P ++K+ + +DP + ++ + + N+ + +++LA A+ FD IE +++
Sbjct: 8 LSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFDAIEDIMQ 67
Query: 105 HQKSLPQGR-REGFIMRIMMLYGK-AGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLT 161
K R F ++ +YG+ AG IK AM+T +DM Y C VKS N L +L
Sbjct: 68 KIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFNLVLNLLV 127
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++ + ++ P I+ D+ S NI+IK CE G L+ A+ V+ E K +P+V
Sbjct: 128 SAKVFDVVHEVYLQAP-MLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPKQRCEPNV 186
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
T++TL+ K + + GL M +G + TFN+ I L + + + +L+
Sbjct: 187 RTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEGLELLER 246
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M G EP+ +Y ++ G + K+ M+G+ + P+ Y+ ++H LC+E
Sbjct: 247 MNIKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRMIGQGVDPSFVSYKKLVHGLCKE 304
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+PN+ +FN+ + LV+ + +++ GIE D + N++IKG C +G L+ A
Sbjct: 112 CWPNVKSFNLVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAF 171
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
V +R PN + + T++H LC++G + A+ + + K+ T + L+ GL
Sbjct: 172 NVLDEFPKQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGL 231
Query: 372 KKNNQ 376
+K +
Sbjct: 232 RKQGK 236
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +YG+A + A++TFY M + K K LN L +L R+ L + K
Sbjct: 117 LIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPAFDLFKDAHKH 176
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D S+NI+++AFC G + AY + +M K V PD+ +Y L+ A + ++
Sbjct: 177 GVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGA 236
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M+ KG P+ T+ + L K++ +A KL+ M+ G PD V YN VI G
Sbjct: 237 VDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILG 296
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FCR G A KV M +PN Y+T+++ LC G + A ++ + K + P
Sbjct: 297 FCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPH 356
Query: 361 VDTISALLEGLKKNNQPCKANTIM--ALVQRRVPH 393
I AL++G + +A ++ +L R PH
Sbjct: 357 FAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPH 391
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++ ++ + C L +AY ++ M+ G PD++ Y T+I F ++ R +
Sbjct: 251 DSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVI 310
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC PNL ++ + L + +A K + M G P + ++KGFC
Sbjct: 311 DDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNV 370
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G ++ A V + L R P++ + ++ +C+ D
Sbjct: 371 GRIEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDD 407
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------LYGK 127
T L AR +D H+L+ + SL G+ F+ +M +Y +
Sbjct: 78 TTHILVRARMYDPARHILK-ELSLMSGKSS-FVFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
GMI+ +++ F M LYG +V + NA L + +S + ++ +FL E+ ++ I D+
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KICPDVA 194
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FNI+I C G +K+ +M +M+K G P ++TY T++ + K R + L + M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG ++ T+N+ I L R + L+ M++ I P+EVTYN +I GF G +
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A ++ + ML L PN + +I EG+F A M K PS + L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 368 LEGLKKNNQ 376
L+GL KN +
Sbjct: 375 LDGLCKNAE 383
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L + KA L + K + D+ ++N++I C + K YL+
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M+K + P+ +TY TLI+ F + + I + L N M+ G PN TFN I ++
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ +A K+ +M+ G+ P EV+Y +++ G C++ D+A+ Y M + R
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI LC+ G + A ++ + K P + T SAL+ G K + A I+ +
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 389 R 389
R
Sbjct: 466 R 466
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K A+ FY M G + S L L ++ + + F M + ++ + +
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRIT 405
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C+ G LD+A +++ EM K G+ PD++TY+ LI+ F K R + + V
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI----V 461
Query: 249 CK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
C+ G PN ++ I + +A ++ M G D T+N+++ C++
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ M ++PN + +I+ G+ A+ + + K P+ T
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 365 SALLEGLKKNNQ 376
+LL+GL K
Sbjct: 582 GSLLKGLCKGGH 593
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN+++ + C+ G + +A M M G+ P+ +++ LI+ + ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-MKKNWVPSVDT 363
G+L A ++ M+ R ++P+ Y ++I LC++G +A + K++ + N +P+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 364 ISALLEGLKKNNQ 376
+ ++G+ K Q
Sbjct: 687 YTCFVDGMFKAGQ 699
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I C MG L +A + M G D T+ L+++ K + M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +F+ I N +A + M + G P TY ++KG C+ GHL
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+K ++ + +Y T++ +C+ G+ A + + ++++ +P T ++L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 369 EGLKKNNQPCKANTIMALV 387
GL + K T++A++
Sbjct: 656 SGLCR-----KGKTVIAIL 669
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN +I G +A + M+ G+ P ++Y L+ K+ ++ G + M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G T+ I L +A L+ M + GI+PD VTY+ +I GFC+ G
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
AK++ + L PN IY T+I+ C+ G
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 3/274 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A D M G + +A + VL + + + L E+ ++ I +
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRK 896
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C +G + A++V EM + P + + ++ A K + + L M+
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P +A+F + +A +L +M G++ D V+YN++I G C G +
Sbjct: 957 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A ++Y M G + N Y+ +I L +E F+ A I+ KD + + ++ S+
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDS 1076
Query: 368 LEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLS 400
LK + KA +A+ R SN LS
Sbjct: 1077 HRNLKMAMEKLKALQNDIAVCHREELDLQSNVLS 1110
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL-- 246
++I+I+ + G++ + + M G P V T ++ + K +W+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV---SVWSFLK 182
Query: 247 -MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ + P++ATFN+ I L + +++ LM M++ G P VTYN V+ +C+ G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ M + + + Y +IH LC+ Y++ +D K+ P+ T +
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 366 ALLEGLKKNNQPCKANTIM 384
L+ G + A+ ++
Sbjct: 303 TLINGFSNEGKVLIASQLL 321
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M LG PD++T +I + + + E N L M + PNL T+N+ + H +KR
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI-LLHGYSKR 767
Query: 271 RSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + L+ + GI PD++T + ++ G C S L++ K+ A + R + +R +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I C G+ N A+ + K DT A++ L +N++
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 874
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ + + + ++L+ + G+ PD +T +L+ + N EIG +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 245 NLMVCKGCFPNLATFNVRIQH-LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+C+G + TFN+ I N +W A L+ +M GI D+ T + ++ R
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINW-AFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ ++ V M + + P + Y +I+ LC+ GD A+++ ++ + P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 364 ISALLEGLKKNNQPCKANTIM--ALVQRRVPHFSS 396
SA++ L K + +A ++ L + VP +S
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI + ++ + ++ LM G P++ T N + +V + M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ I PD T+N++I C G + + + M P Y T++H+ C++G F
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 344 LAYIMCKDSMKKNWVPS-VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
A I D MK V + V T + L+ L ++N+ K ++ +++R+ H
Sbjct: 246 AA-IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 45/226 (19%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
LK ++AF+ ++ D ++FN++I C G ++ A+ ++ M LG+ D T
Sbjct: 809 LKILKAFICR-----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
++S +++R + ++ ++ M +
Sbjct: 864 AMVSVLNRNHRFQ-----------------------------------ESRMVLHEMSKQ 888
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI P+ Y +I G CR G + A V M+ ++ P M+ L + G + A
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
++ + +K VP++ + + L+ KN N I AL R V
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKN-----GNVIEALELRVV 989
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 155/366 (42%), Gaps = 46/366 (12%)
Query: 41 LVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
L++ PL+ P L+++ +K + H + Y F +++L +F I+
Sbjct: 85 LLELPLDVPTLLEIFERVGGQKGY------CH---TFDVYYVF---INKLGAIGKFKLID 132
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKV 159
LL K RE M IM YGKAG A+ DM +Y C+ T KS + L++
Sbjct: 133 KLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEI 192
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + ++ K + +F+F IV+KA C +D A ++ +M K G P
Sbjct: 193 LVTGNCPQVATNVFYDMLSK-GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ I Y TLI A + N+ L M GC P++ TFN I L + A KL+
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY------------------------- 314
M G PD +TY ++ G CR G L+ A+K+
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371
Query: 315 -------SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
M+ P+ Y ++H LC+EG + A + + ++ P+V T + L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431
Query: 368 LEGLKK 373
+ GL K
Sbjct: 432 VNGLCK 437
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
LN + S LK Q+FL E F Q DIF++NI++ C+ G L A ++ EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ G +P+VITY L++ K E + + M +G N +N I L K +
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A L+ M G +PD TYN +I G C+ +D A +++ ML + N Y T+
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
IH L + G F A + D + + T + L++ K
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D +M GC+ V + + L ++ L+ L E+ + + +
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR-GLTINS 460
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I A C + A ++ EM G KPD+ TY +LI K +R + L++
Sbjct: 461 VIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHN 520
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G N T+N I L+ + +A L+ M G D++TYN +IK FC+ G+
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN 580
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ ++Y M+ L + MI+ LC+ G + A+ +D++ + +VP + T ++
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNS 640
Query: 367 LLEGLKK 373
+L GL K
Sbjct: 641 VLNGLCK 647
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I A G KA ++ +M G D ITY LI AF K E G L+ M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G + + N+ I L + A + + G PD VTYN V+ G C+ G +
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + + P+ Y T I + C+EG N A ++ +VPS T + L
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711
Query: 368 LEG-LKKNNQ 376
+ LK++NQ
Sbjct: 712 VYTLLKQSNQ 721
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE----SRDLKAIQAFLMEVPEKFHI 182
+ G + A+ DM GC + N +K + + L+ + +M+ +
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD-----GL 596
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
D S NI+I C++G +D A+ + + G PD++TY ++++ K R +
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-----NKLMGLMQRFGIE----PDEVT 293
L++ + +G P+ T+N I SWQ N R GIE P +T
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFI--------SWQCKEGMVNDACSFFYR-GIENGFVPSNLT 707
Query: 294 YNLVI 298
+N+++
Sbjct: 708 WNVLV 712
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------LYGK 127
T L AR +D H+L+ + SL G+ F+ +M +Y +
Sbjct: 118 TTHILVRARMYDPARHILK-ELSLMSGKSS-FVFGALMTTYRLCNSNPSVYDILIRVYLR 175
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
GMI+ +++ F M LYG +V + NA L + +S + ++ +FL E+ ++ I D+
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KICPDVA 234
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FNI+I C G +K+ +M +M+K G P ++TY T++ + K R + L + M
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG ++ T+N+ I L R + L+ M++ I P+EVTYN +I GF G +
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A ++ + ML L PN + +I EG+F A M K PS + L
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 368 LEGLKKNNQ 376
L+GL KN +
Sbjct: 415 LDGLCKNAE 423
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L + KA L + K + D+ ++N++I C + K YL+
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M+K + P+ +TY TLI+ F + + I + L N M+ G PN TFN I ++
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ +A K+ +M+ G+ P EV+Y +++ G C++ D+A+ Y M + R
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI LC+ G + A ++ + K P + T SAL+ G K + A I+ +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 389 R 389
R
Sbjct: 506 R 506
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K A+ FY M G + S L L ++ + + F M + ++ + +
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRIT 445
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C+ G LD+A +++ EM K G+ PD++TY+ LI+ F K R + + V
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI----V 501
Query: 249 CK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
C+ G PN ++ I + +A ++ M G D T+N+++ C++
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ M ++PN + +I+ G+ A+ + + K P+ T
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 365 SALLEGLKKNNQ 376
+LL+GL K
Sbjct: 622 GSLLKGLCKGGH 633
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN+++ + C+ G + +A M M G+ P+ +++ LI+ + ++
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-MKKNWVPSVDT 363
G+L A ++ M+ R ++P+ Y ++I LC++G +A + K++ + N +P+
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 364 ISALLEGLKKNNQ 376
+ ++G+ K Q
Sbjct: 727 YTCFVDGMFKAGQ 739
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I C MG L +A + M G D T+ L+++ K + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +F+ I N +A + M + G P TY ++KG C+ GHL
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+K ++ + +Y T++ +C+ G+ A + + ++++ +P T ++L+
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 369 EGLKKNNQPCKANTIMALV 387
GL + K T++A++
Sbjct: 696 SGLCR-----KGKTVIAIL 709
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN +I G +A + M+ G+ P ++Y L+ K+ ++ G + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G T+ I L +A L+ M + GI+PD VTY+ +I GFC+ G
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
AK++ + L PN IY T+I+ C+ G
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL-- 246
++I+I+ + G++ + + M G P V T ++ + K +W+
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV---SVWSFLK 222
Query: 247 -MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ + P++ATFN+ I L + +++ LM M++ G P VTYN V+ +C+ G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ M + + + Y +IH LC+ Y++ +D K+ P+ T +
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 366 ALLEGLKKNNQPCKANTIM 384
L+ G + A+ ++
Sbjct: 343 TLINGFSNEGKVLIASQLL 361
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A D M G + +A + VL + + + L E+ ++ I +
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRK 936
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C +G + A++V EM + P + + ++ A K + + L M+
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P +A+F + +A +L +M G++ D V+YN++I G C G +
Sbjct: 997 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1056
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+A ++Y M G + N Y+ +I L +E F+ A I+ KD + + ++ S+
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSM 1110
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M LG PD++T +I + + + E N L M + PNL T+N+ + H +KR
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI-LLHGYSKR 807
Query: 271 RSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + L+ + GI PD++T + ++ G C S L++ K+ A + R + +R +
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I C G+ N A+ + K DT A++ L +N++
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 914
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ + + + ++L+ + G+ PD +T +L+ + N EIG +
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852
Query: 245 NLMVCKGCFPNLATFNVRIQHL-VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+C+G + TFN+ I N +W A L+ +M GI D+ T + ++ R
Sbjct: 853 KAFICRGVEVDRYTFNMLISKCCANGEINW-AFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ ++ V M + + P + Y +I+ LC+ GD A+++ ++ + P
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 364 ISALLEGLKKNNQPCKANTIM--ALVQRRVPHFSS 396
SA++ L K + +A ++ L + VP +S
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 1006
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI + ++ + ++ LM G P++ T N + +V + M
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ I PD T+N++I C G + + + M P Y T++H+ C++G F
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 344 LAYIMCKDSMKKNWVPS-VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
A I D MK V + V T + L+ L ++N+ K ++ +++R+ H
Sbjct: 286 AA-IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 45/226 (19%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
LK ++AF+ ++ D ++FN++I C G ++ A+ ++ M LG+ D T
Sbjct: 849 LKILKAFICR-----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
++S +++R + ++ ++ M +
Sbjct: 904 AMVSVLNRNHRFQ-----------------------------------ESRMVLHEMSKQ 928
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI P+ Y +I G CR G + A V M+ ++ P M+ L + G + A
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
++ + +K VP++ + + L+ KN N I AL R V
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKN-----GNVIEALELRVV 1029
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 155/366 (42%), Gaps = 46/366 (12%)
Query: 41 LVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
L++ PL+ P L+++ +K + H + Y F +++L +F I+
Sbjct: 85 LLELPLDVPTLLEIFERVGGQKGY------CH---TFDVYYVF---INKLGAIGKFKLID 132
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKV 159
LL K RE M IM YGKAG A+ DM +Y C+ T KS + L++
Sbjct: 133 KLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEI 192
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + ++ K + +F+F IV+KA C +D A ++ +M K G P
Sbjct: 193 LVTGNCPQVATNVFYDMLSK-GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP 251
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ I Y TLI A + N+ L M GC P++ TFN I L + A KL+
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY------------------------- 314
M G PD +TY ++ G CR G L+ A+K+
Sbjct: 312 DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLK 371
Query: 315 -------SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
M+ P+ Y ++H LC+EG + A + + ++ P+V T + L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431
Query: 368 LEGLKK 373
+ GL K
Sbjct: 432 VNGLCK 437
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
LN + S LK Q+FL E F Q DIF++NI++ C+ G L A ++ EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ G +P+VITY L++ K E + + M +G N +N I L K +
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A L+ M G +PD TYN +I G C+ +D A +++ ML + N Y T+
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
IH L + G F A + D + + T + L++ K
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D +M GC+ V + + L ++ L+ L E+ + + +
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR-GLTINS 460
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I A C + A ++ EM G KPD+ TY +LI K +R + L++
Sbjct: 461 VIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHN 520
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G N T+N I L+ + +A L+ M G D++TYN +IK FC+ G+
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN 580
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ ++Y M+ L + MI+ LC+ G + A+ +D++ + +VP + T ++
Sbjct: 581 IEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNS 640
Query: 367 LLEGLKK 373
+L GL K
Sbjct: 641 VLNGLCK 647
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I A G KA ++ +M G D ITY LI AF K E G L+ M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G + + N+ I L + A + + G PD VTYN V+ G C+ G +
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + + P+ Y T I + C+EG N A + ++ +VPS T + L
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711
Query: 368 LEG-LKKNNQ 376
+ LK++NQ
Sbjct: 712 VYTLLKQSNQ 721
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G + A+ DM GC + N +K + ++ K ++ + + + + D
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG--LGAD 599
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S NI+I C++G +D A+ + + G PD++TY ++++ K R + L++
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD 659
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM----GLMQRFGIE----PDEVTYNLV 297
+ +G P+ T+N I SWQ + M L GIE P +T+N++
Sbjct: 660 RLQVEGVRPDAFTYNTFI--------SWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711
Query: 298 I 298
+
Sbjct: 712 V 712
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 149/308 (48%), Gaps = 23/308 (7%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------LYGK 127
T L AR + Y + +L+H G F+ ++M +Y +
Sbjct: 60 TTHVLVRARLYGYAKSILKHLAQKNSG--SNFLFGVLMDTYPLCSSNPAVFDLLIRVYLR 117
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
GM+ HA++TF M + G K +V + N + + ++ + F ++ + ++
Sbjct: 118 QGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTS-RVCPNVS 176
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
SFNI+I C G L KA ++ M++ G P +++Y TL+S K R + L + M
Sbjct: 177 SFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM 236
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
CKG ++ T+N+ I L RS Q ++ M+ I P+EV+YN +I GF + G +
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKI 296
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISA 366
+A +V++ M+ L PN Y +I+ C G+F A + D M+ N V P+ TI
Sbjct: 297 GVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLL-DVMEANDVRPNEVTIGT 355
Query: 367 LLEGLKKN 374
LL GL K+
Sbjct: 356 LLNGLYKS 363
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G +K A++ M G T+ S N L + K + + K IQ D+ +
Sbjct: 189 GKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECK-GIQADVCT 247
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+ I + C + YLV+ +M+ + P+ ++Y TLI+ F K+ + + ++N M+
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI 307
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PNL T+N+ I +A +L+ +M+ + P+EVT ++ G +S D
Sbjct: 308 ELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFD 367
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG----DFNLAYIMCKDSMKKNWVPSVDTI 364
+A+ + R N + MI LC+ G F L MCKD + P + T
Sbjct: 368 VARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGV----YPDIITF 423
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPH 393
S L+ G K KA +M+ + R VP+
Sbjct: 424 SVLINGFCKVGNLNKAKEVMSKIYREGFVPN 454
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 84/157 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI+I +C G ++A ++ M+ V+P+ +T TL++ YK + ++ +
Sbjct: 314 NLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + V I L +A +L+ M + G+ PD +T++++I GFC+
Sbjct: 374 ERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKV 433
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G+L+ AK+V S + +PN I+ T+I+ C+ G+
Sbjct: 434 GNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGN 470
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ N ++ + CE G L +A + + ++G+ P+ +T+ +I+ + ++
Sbjct: 489 DNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVF 548
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T+ ++ L + W+A KL+ + + D ++YN +I +S
Sbjct: 549 DKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKS 608
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A +++ M+ ++P+ Y ++ L +EG A+I M+K + ++++I
Sbjct: 609 GNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE-ILTLNSI 667
Query: 365 --SALLEGLKKNNQP 377
+ ++GL K Q
Sbjct: 668 VYTCFIDGLFKAGQS 682
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+ + G++ A M G KP V T ++++ K+ R + + M+
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQML 167
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN+++FN+ I L + + +A ++ +M+R G P V+YN ++ C+ G
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M + + + Y I LC+ Y++ K K P+ + + L+
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287
Query: 369 EGLKKNNQ 376
G K +
Sbjct: 288 NGFVKEGK 295
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
FL + +K + + + I + G A + EM++ G+ D+I ++ +
Sbjct: 652 FLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGY 711
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + + L + K PNL TFN+ + + KL LM+R G P+
Sbjct: 712 SRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNR 771
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+TY+ +I G C G L++ K+ + + + +I C+ D +
Sbjct: 772 LTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 1/167 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D +++ ++ G L A++ + MQK + + I YT I +K + + L
Sbjct: 629 DSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYL 688
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG +L N + + A+ L+ + + P+ T+N+++ G+ R
Sbjct: 689 FKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR 748
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ K+Y+ M PNR Y ++I LC G L M K
Sbjct: 749 GQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 28/261 (10%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--- 181
Y G A F M G + + + LKVL + ++ + L +K H
Sbjct: 535 YANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL----KKLHCIP 590
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D S+N +I + G L +A + EM + + PD TYT ++S ++ R
Sbjct: 591 LAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR----- 645
Query: 242 GLWNLMVCKGCFP-----------NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+VC F N + I L +S A L M+ G+ D
Sbjct: 646 -----LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ N + G+ R G + A + S + ++PN + ++H + D + +
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760
Query: 351 DSMKKNWVPSVDTISALLEGL 371
+ + P+ T +L+ GL
Sbjct: 761 LMRRSGFFPNRLTYHSLILGL 781
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 8/188 (4%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++K C +G + A+ + +M LG+ D ++ + E + M+
Sbjct: 882 MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P +TF + K +A+ L LM+ + ++ D V YN++I C +G + A
Sbjct: 942 KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y + + L+PN Y+ ++ + + + I+ KD + V S L+G
Sbjct: 1002 DFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV------SGYLDG- 1054
Query: 372 KKNNQPCK 379
K+ + C+
Sbjct: 1055 -KSQKSCR 1061
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 138/374 (36%), Gaps = 57/374 (15%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI----MRIMMLYG--KAGMIKHAM 135
+ D ++ F + +L + ++ + + REGF+ + ++Y K G + M
Sbjct: 416 VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGM 475
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M+L G + N+ + L E+ L + FL + + + + +F+ +I
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHI-SRIGLVPNSVTFDCIING 534
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN---LMVCKGC 252
+ +G A+ V +M G P TY +L+ K G W L+ C
Sbjct: 535 YANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCK------GQNFWEARKLLKKLHC 588
Query: 253 FP---NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
P + ++N I + +A +L M + I PD TY ++ G R G L
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648
Query: 310 AKKVYSAMLGRRLMP-NRKIYQTMIHYLCQEGDFNLAYIMCKD----------------- 351
A ++ + ++ N +Y I L + G A + K+
Sbjct: 649 AFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSIT 708
Query: 352 ------------------SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ KN +P++ T + LL G + + L++R
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR--SG 766
Query: 394 FSSNQLSAFKSILS 407
F N+L+ IL
Sbjct: 767 FFPNRLTYHSLILG 780
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 5/181 (2%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
+K ++ F+ E D +FN++I+ CE+ LDK + M+ V D T
Sbjct: 791 IKMLKMFIAESS-----TIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQK 845
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+ + + + M+ KG P + ++ + A KL M
Sbjct: 846 AVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVAL 905
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI D+ +++G G ++ A + ML + +P + T++H C++ +F A
Sbjct: 906 GISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEA 965
Query: 346 Y 346
+
Sbjct: 966 H 966
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------LYGK 127
T L AR +D H+L+ + SL G+ F+ +M +Y +
Sbjct: 78 TTHILVRARMYDPARHILK-ELSLMSGKSS-FVFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
GMI+ +++ F M LYG +V + NA L + +S + ++ +FL E+ ++ I D+
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KICPDVA 194
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FNI+I C G +K+ +M +M+K G P ++TY T++ + K R + L + M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG ++ T+N+ I L R + L+ M++ I P+EVTYN +I GF G +
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A ++ + ML L PN + +I EG+F A M K PS + L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 368 LEGLKKNNQ 376
L+GL KN +
Sbjct: 375 LDGLCKNAE 383
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L + KA L + K + D+ ++N++I C + K YL+
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M+K + P+ +TY TLI+ F + + I + L N M+ G PN TFN I ++
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ +A K+ +M+ G+ P EV+Y +++ G C++ D+A+ Y M + R
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI LC+ G + A ++ + K P + T SAL+ G K + A I+ +
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 389 R 389
R
Sbjct: 466 R 466
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K A+ FY M G + S L L ++ + + F M + ++ + +
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRIT 405
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C+ G LD+A +++ EM K G+ PD++TY+ LI+ F K R + + V
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI----V 461
Query: 249 CK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
C+ G PN ++ I + +A ++ M G D T+N+++ C++
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ M ++PN + +I+ G+ A+ + + K P+ T
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 365 SALLEGLKKNNQ 376
+LL+GL K
Sbjct: 582 GSLLKGLCKGGH 593
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN+++ + C+ G + +A M M G+ P+ +++ LI+ + ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-MKKNWVPSVDT 363
G+L A ++ M+ R ++P+ Y ++I LC++G +A + K++ + N +P+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 364 ISALLEGLKKNNQ 376
+ ++G+ K Q
Sbjct: 687 YTCFVDGMFKAGQ 699
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I C MG L +A + M G D T+ L+++ K + M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +F+ I N +A + M + G P TY ++KG C+ GHL
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+K ++ + +Y T++ +C+ G+ A + + ++++ +P T ++L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 369 EGLKKNNQPCKANTIMALV 387
GL + K T++A++
Sbjct: 656 SGLCR-----KGKTVIAIL 669
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN +I G +A + M+ G+ P ++Y L+ K+ ++ G + M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G T+ I L +A L+ M + GI+PD VTY+ +I GFC+ G
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
AK++ + L PN IY T+I+ C+ G
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL-- 246
++I+I+ + G++ + + M G P V T ++ + K +W+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV---SVWSFLK 182
Query: 247 -MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ + P++ATFN+ I L + +++ LM M++ G P VTYN V+ +C+ G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ M + + + Y +IH LC+ Y++ +D K+ P+ T +
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 366 ALLEGLKKNNQPCKANTIM 384
L+ G + A+ ++
Sbjct: 303 TLINGFSNEGKVLIASQLL 321
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A D M G + +A + VL + + + L E+ ++ I +
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRK 896
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C +G + A++V EM + P + + ++ A K + + L M+
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P +A+F + +A +L +M G++ D V+YN++I G C G +
Sbjct: 957 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+A ++Y M G + N Y+ +I L +E F+ A I+ KD + + ++ S+
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSM 1070
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M LG PD++T +I + + + E N L M + PNL T+N+ + H +KR
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI-LLHGYSKR 767
Query: 271 RSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + L+ + GI PD++T + ++ G C S L++ K+ A + R + +R +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I C G+ N A+ + K DT A++ L +N++
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 874
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ + + + ++L+ + G+ PD +T +L+ + N EIG +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 245 NLMVCKGCFPNLATFNVRIQHL-VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+C+G + TFN+ I N +W A L+ +M GI D+ T + ++ R
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINW-AFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ ++ V M + + P + Y +I+ LC+ GD A+++ ++ + P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 364 ISALLEGLKKNNQPCKANTIM--ALVQRRVPHFSS 396
SA++ L K + +A ++ L + VP +S
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI + ++ + ++ LM G P++ T N + +V + M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ I PD T+N++I C G + + + M P Y T++H+ C++G F
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 344 LAYIMCKDSMKKNWVPS-VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
A I D MK V + V T + L+ L ++N+ K ++ +++R+ H
Sbjct: 246 AA-IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 45/226 (19%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
LK ++AF+ ++ D ++FN++I C G ++ A+ ++ M LG+ D T
Sbjct: 809 LKILKAFICR-----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
++S +++R + ++ ++ M +
Sbjct: 864 AMVSVLNRNHRFQ-----------------------------------ESRMVLHEMSKQ 888
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI P+ Y +I G CR G + A V M+ ++ P M+ L + G + A
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
++ + +K VP++ + + L+ KN N I AL R V
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKN-----GNVIEALELRVV 989
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 150/300 (50%), Gaps = 6/300 (2%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLLEHQK 107
P + +K DP+K LF N + Y ++ V +LA +RRF+ +E +L + +
Sbjct: 50 PFVNNVKEVEDPDKALSLFHDYLQNGF--RHDYPSYSALVYKLARSRRFEAVETVLGYLQ 107
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDL 166
R+ + + YGK G++ A+ F +M + C RT++S NA L VL ++ R
Sbjct: 108 DFNVRCRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLF 167
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
A Q F + + + + FNI+IK + + G +A V EM + V+P V+TY +
Sbjct: 168 DAKQLF--DRSSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNS 225
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI ++ GL+ M+ KG PN T+ + ++ L + +A K++ M+ G
Sbjct: 226 LIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRG 285
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+P + + +++ + G ++ AK + M RR P+ IY +I++LC+EG AY
Sbjct: 286 CKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAY 345
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+N M C L +FN + LV+ R + A +L G + V +N++IKG+
Sbjct: 137 LFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFRLNSVPFNILIKGWL 196
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G A KV+ ML R++ P+ Y ++I YLC+ G+ A + KD +KK P+
Sbjct: 197 KKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAV 256
Query: 363 TISALLEGL 371
T + L+EGL
Sbjct: 257 TYALLMEGL 265
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+ F+D G + S +A + L SR +A++ L + + F+++ F +
Sbjct: 64 ALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVETVLGYL-QDFNVRCRDTLFIALF 122
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ + ++G++ KA + EM + ++ L++ ++R L++ G
Sbjct: 123 EHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFR 182
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
N FN+ I+ + K +QA K+ M +EP VTYN +I CR+G L AK +
Sbjct: 183 LNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGL 242
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ + PN Y ++ LC G++ A M D + P L+ L K
Sbjct: 243 FKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGK 302
Query: 374 NNQPCKANTIMALVQRR 390
+ +A ++ +++R
Sbjct: 303 KGKIEEAKLLLLEMKKR 319
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 102/252 (40%), Gaps = 38/252 (15%)
Query: 109 LPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
+ +G+R + +++ G G K A +DM GCK + + L + +
Sbjct: 247 IKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKI 306
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ + L+E+ ++ + D+ +NI+I C+ G + +AY + EMQ G + + TY
Sbjct: 307 EEAKLLLLEMKKR-RFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRM 365
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L F + E G + N M+ P + TFN + +GLM
Sbjct: 366 LADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFV---------------VGLM---- 406
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+SG +D A V M R++ + ++ ++ C E +
Sbjct: 407 ----------------KSGSIDGAFFVLEEMEKRKMALDSDGWEALVRCCCSEHRGAGSV 450
Query: 347 IMCKDSMKKNWV 358
++C+ ++ N V
Sbjct: 451 LLCESLIRHNLV 462
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 38/314 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G+I HA+ +M GC + + N + L + ++ + + K ++ D+
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP-DV 455
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+FN +I +C+ LD A ++ M G+ PDVITY ++++ K + + N +
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KGC PN T+N+ I++ + +A+ ++ M + G+ PD V++N +I GFCR+G
Sbjct: 516 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGD 575
Query: 307 LD-----------------------------------MAKKVYSAMLGRRLMPNRKIYQT 331
LD MA+K++ M+ + P+ Y+
Sbjct: 576 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR- 390
++ LC+ + + AY + + K +VPS+ T +L L N++ +A I+ ++ R
Sbjct: 636 LVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695
Query: 391 -VPHFSSNQLSAFK 403
VP LS K
Sbjct: 696 VVPEVVDTILSTDK 709
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIF 187
G I+ A++ F + K + N+ +K L + L A+Q V E H DI+
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP--DIW 421
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI+I C+MG + A +VM + G PDV T+ TLI + K + + L M
Sbjct: 422 TYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 481
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P++ T+N + L ++ + N+ M G P+ +TYN++I+ FC+ L
Sbjct: 482 WTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQL 541
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A V M L+P+ + T+IH C+ GD + AY++ + +K + + DT + L
Sbjct: 542 EEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNIL 601
Query: 368 L 368
+
Sbjct: 602 I 602
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 43/325 (13%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
++R + +G +H D ++ V + N L L + D+ A L +V
Sbjct: 182 VVRGLYAHGHGYNARHLFDEMLGRDVF---PDVATFNNVLHALCQKGDVMESGALLAKVL 238
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
++ + + F+ NI I+ CE G L++A + +VE V PDV+TY TL+ KD++
Sbjct: 239 KR-GMSANKFTCNIWIRGLCEDGRLEEA-VALVERMGAYVAPDVVTYNTLMRGLCKDSKV 296
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM------------------ 279
+ M+ +GC P+ T+N I +A +L+
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356
Query: 280 --GLMQRFGIE---------------PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
GL IE PD V YN ++KG CR G + A +V + M+
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P+ Y +I+ LC+ G+ + A ++ D++ K ++P V T + L++G K K ++
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKR---LKLDS 473
Query: 383 IMALVQRRVPHFSSNQLSAFKSILS 407
+ LV+R + + + + S+L+
Sbjct: 474 ALQLVERMWTYGIAPDVITYNSVLN 498
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 52/333 (15%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKS--LPQGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
A+ + L A R D ++ L +S P + ++ I Y +AG ++ A+D F
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQA-YARAGRLRAAVDAFE 95
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-------DIFSFNIV 192
M L+ C + NA + L + A + K +++ D + +
Sbjct: 96 RMDLFACPPAAPAYNAIMDAL--------VNAAYHDQAHKVYVRMLAAGVAPDARTHTVR 147
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+K+FC G A ++ + + G Y T++ Y L++ M+ +
Sbjct: 148 LKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDV 207
Query: 253 FPNLATFNVRIQHLVNK--------------RRSWQANKL------------------MG 280
FP++ATFN + L K +R ANK +
Sbjct: 208 FPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVA 267
Query: 281 LMQRFG--IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
L++R G + PD VTYN +++G C+ + A + M+ + +P+ Y T+I C+
Sbjct: 268 LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
G A + KD++ K +VP T +L+ GL
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I +C+ G+L +A ++ + G PD +TY +LI+ + E L+
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N K P+L +N ++ L + A ++M M G PD TYN++I G C+
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKM 433
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A V + + + +P+ + T+I C+ + A + + P V T
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493
Query: 365 SALLEGLKKNNQPCKAN 381
+++L GL K + + N
Sbjct: 494 NSVLNGLCKAGKAKEVN 510
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G +++A + E Q +KPD++ Y +L+ + +
Sbjct: 349 DRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVM 408
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV +GC P++ T+N+ I L A +M G PD T+N +I G+C+
Sbjct: 409 NEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKR 468
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A ++ M + P+ Y ++++ LC+ G ++ + K P+ T
Sbjct: 469 LKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 528
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L+E K NQ +A+ ++
Sbjct: 529 NILIENFCKINQLEEASGVI 548
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 6/254 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG K +TF +M L GC+ + N ++ + L+ ++ + + + D
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP-DA 560
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
SFN +I FC G LD AYL+ ++ + G T+ LI A+ ++ ++
Sbjct: 561 VSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGE 620
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P+L T+ + + L +A + M G P T+ ++ +
Sbjct: 621 MISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHR 680
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + M+ ++P ++ T++ + + I+ ++ MKK + S
Sbjct: 681 VSEAVAIIHIMVRMGVVP--EVVDTILS--TDKKEIAAPKILVEELMKKGHI-SYRAYEV 735
Query: 367 LLEGLKKNNQPCKA 380
L EG++ N KA
Sbjct: 736 LHEGVRDNKLTRKA 749
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS--FNIVIKAFCEMGILDKAY 206
T+ + A ++ L + L + A L + H+ D + I+A+ G L A
Sbjct: 34 TIPAYRALIRELVSAGRLDDVDAALASA--RSHLAPDSLQPLYVASIQAYARAGRLRAAV 91
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
M P Y ++ A + + ++ M+ G P+ T VR++
Sbjct: 92 DAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSF 151
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
R A +L+ + G + Y V++G GH A+ ++ MLGR + P+
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDV 211
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ ++H LCQ+GD + + +K+ + T + + GL ++ + +A +AL
Sbjct: 212 ATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA---VAL 268
Query: 387 VQR 389
V+R
Sbjct: 269 VER 271
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 2/246 (0%)
Query: 165 DLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
D + +A+ L+E + D+F++NI+I C+ G + KA + M + GV+ V+T
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
YT+LI A K + + + L++ V +G P+L +N I +A ++MG M+
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ I PD+VTYN +++G C G +D A+K+ M R + P+ Y T+I +GD
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLSAF 402
A + + M K + P++ T +AL++GL KN Q A N + +V+ + S +S
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
Query: 403 KSILSK 408
+ + ++
Sbjct: 545 EGLTTE 550
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ F +M G + TV + + + L++ ++ E + I+ D+
Sbjct: 339 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR-GIRPDL 397
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I + G +D+A+ +M EM+K + PD +TY TL+ R + L +
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 457
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+L T+N I K A ++ M G P +TYN +I+G C++G
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 517
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A+ + M+ + P+ Y ++I L E +
Sbjct: 518 GDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITY 224
++A + E+ E+ I + +++ VI +C++G +D+A V EM G VKP+ + Y
Sbjct: 201 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 260
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI + + + + MV +G +AT+N+ + L R +A +L+ M
Sbjct: 261 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 320
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ D TYN++I G C+ G++ A +++ M R + Y ++I+ L ++G
Sbjct: 321 KGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 380
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++++ P + +AL+ + +A IM ++++
Sbjct: 381 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 426
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
TFN+ ++HL + + +A +L+ M R P+ VTYN VI GFC G + A + M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 318 LGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
R + PN+ Y T+I C+ G + A + + + K V P +AL+ G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 266
>gi|194689808|gb|ACF78988.1| unknown [Zea mays]
Length = 279
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M++ G+ P YTTLI + YK LW MV C P++AT+NV+ + +
Sbjct: 15 MREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECEPDVATYNVKAMYYALHGK 74
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++M M+ G++PD TYN ++ +C+SG L+ AK +Y ++ + + Y+
Sbjct: 75 PEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEKGCSADAATYKH 134
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
M+ LC GDF+ + KDS+K+ VP T+ L+EGL K + A ++A V++
Sbjct: 135 MLAELCAYGDFDAGLGIFKDSLKRRKVPDFRTMKGLVEGLAKGGRVADAKEVVAEVKKMF 194
Query: 392 PHFSSNQLSAFKSI 405
P N LS +K +
Sbjct: 195 PE---NLLSGWKKV 205
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N+ + G ++ VM EM+ GVKPD TY L++++ K + E L+
Sbjct: 58 DVATYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLY 117
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-NKLMGL----MQRFGIEPDEVTYNLVIK 299
+ + KGC + AT+ +H++ + ++ + +G+ ++R + PD T +++
Sbjct: 118 HSLAEKGCSADAATY----KHMLAELCAYGDFDAGLGIFKDSLKRRKV-PDFRTMKGLVE 172
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPN 325
G + G + AK+V + + +++ P
Sbjct: 173 GLAKGGRVADAKEVVAEV--KKMFPE 196
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 155/330 (46%), Gaps = 4/330 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P ++KL K+E++P +F + Y F + RL + ++ +
Sbjct: 6 KSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLT 161
+E ++ E + ++ Y K M A+D F MH ++GC+ ++S N+ L L
Sbjct: 66 VELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 125
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
ES ++F + E + ++ ++NI+IK C DKA ++ M + G PDV
Sbjct: 126 ESNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG- 280
+Y TLI++ K+ L++ M +G P++A +N+ I K A+++
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L++ + P+ +YN++I G C+ G D + +++ M + Y T+IH LC G
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 304
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + A + K+ + P V + +L G
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNG 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 39/332 (11%)
Query: 78 ENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAM 135
++ Y + + L G+ D + +++ G ++ ML G +AG I+ +
Sbjct: 288 QDLYTYSTLIHGLCGSGNLDGATRV--YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF---------------------- 172
+ + M GC RTV S N ++ L E+ + +AI +
Sbjct: 346 ELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404
Query: 173 -----------LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++E E D F+++ +I C G LD+ V+ +M K G KP+
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+I+ F + ++ E + MV KGCFP + T+N I L R +A L+
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M G +P+ +TY+L++ G C+ LDMA ++ L + P+ K++ +IH LC G
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + ++ VP++ T + L+EG K
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ +A+ ++ L R D + +L+ ++ + +A ++ A+ F
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M GC TV + N + L+++ A + E+ K + ++ ++++++ C+
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQ 546
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
LD A + + + G KPDV + +I + E L++ M + C PNL T
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
N ++ R +A+K+ + ++G +PD ++YN+ +KG C + A + +
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAV 666
Query: 319 GRRLMPNRKIYQTMIHYLCQEG 340
R ++P + ++ + G
Sbjct: 667 DRGVLPTAITWNILVRAVLDNG 688
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
VIKA+ + + D+A + M ++ G +P + +Y +L++A + N+ + +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PNL T+N+ I+ K++ +A +L+ M G PD +Y +I ++G++ A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLE 369
K++ M R + P+ Y +I ++GD A + + +K V P++ + + ++
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 370 GLKK 373
GL K
Sbjct: 264 GLCK 267
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + M +GCK NA + + L+ F + K +
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP-TV 499
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + +AY ++ EM G KP++ITY+ L++ + + ++ LW
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P++ N+ I L + + A +L M++ P+ VT+N +++GF +
Sbjct: 560 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRD 619
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A K++ +L P+ Y + LC + A D++ + +P+ T +
Sbjct: 620 FERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNI 679
Query: 367 LLEGLKKNN 375
L+ + N
Sbjct: 680 LVRAVLDNG 688
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM-VCKGCFPNLATFNVRIQHLV 267
++ QK DV T+I A+ K++ P+ ++ M GC P + ++N + L+
Sbjct: 68 LIRTQKCKCPEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 125
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ +A + G+ P+ TYN++IK CR D AK++ + M + P+
Sbjct: 126 ESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF 185
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
Y T+I+ L + G + A + + ++ P V + L++G K A+ I
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 136/256 (53%), Gaps = 5/256 (1%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
+ DM L G + N ++ L +S + A + E+PEK + + F+F I+++ +C
Sbjct: 135 YKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYC 193
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ G+ DK ++ M+ GV P+ + Y T++S+F ++ R + L M +G P++
Sbjct: 194 KAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIV 253
Query: 258 TFNVRIQHLVNKRRSWQANKL---MGLMQRFGI-EPDEVTYNLVIKGFCRSGHLDMAKKV 313
TFN RI L + + A+++ M L + G+ P+ +TYNL++KGFC+ G L+ AK +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++ + + + Y + L + G F A + K + K PS+ + + L++GL K
Sbjct: 314 FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCK 373
Query: 374 NNQPCKANTIMALVQR 389
A TI+ L++R
Sbjct: 374 LGMLSDAKTIVGLMKR 389
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 24/300 (8%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCK 147
L +R F +E L+ LP R I +ML G K G+++ A F +
Sbjct: 269 LDASRIFSDME--LDEYLGLP---RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+++S N L+ L + L ++ +K I I+S+NI++ C++G+L A
Sbjct: 324 VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDK-GIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ M++ GV PD +TY L+ + + + L M+ C PN T N+ + L
Sbjct: 383 IVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
N R +A +L+ M G D VT N+++ G C SG LD A ++ M
Sbjct: 443 NMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM---------- 492
Query: 328 IYQTMIHYLCQEGDFNLAYI-MCKDSM-KKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+H G+ +YI + DS+ + N +P + T S LL GL K + +A T+ A
Sbjct: 493 ----RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFA 548
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 87/168 (51%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
KP + Y L+ + ++ R E + L+ MV G P TFN+ I+ L + A +
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L M G +P+E T+ ++++G+C++G D ++ ++M ++PN+ +Y T++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+EG + + + + ++ VP + T ++ + L K + A+ I +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ ++ C+ G +A + EM ++PD + Y I F K + +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC +L T+N I L K + ++ + LM M+ GI P+ TYN I+ C
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G ++ A + M+ + + PN ++ +I C+ DF++A
Sbjct: 643 GKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMA 683
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D ++NI I FC+ G + A+ V+ +M+K G + TY +LI N+ +
Sbjct: 555 LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL + M KG PN+ T+N IQ+L + A L+ M + I P+ ++ +I F
Sbjct: 615 GLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAF 674
Query: 302 CRSGHLDMAKKVYSA 316
C+ DMA++V+
Sbjct: 675 CKVPDFDMAQEVFET 689
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 24/267 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A +M C + N L L + + L ++ EK +
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGY-GL 464
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-----------------------PDV 221
D + NI++ C G LDKA ++ M+ G PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
ITY+TL++ K R L+ M+ + P+ +N+ I H + + A +++
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G TYN +I G + + M + + PN Y T I YLC+ G
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGK 644
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + M+KN P+V + L+
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G I A DM GC +++++ N+ + L + I + E+ EK I
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK-GISP 627
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N I+ CE G ++ A ++ EM + + P+V ++ LI AF K ++ ++
Sbjct: 628 NICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF 687
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
V C +++ L+ + +A +L+ + G E Y ++ C+
Sbjct: 688 ETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKK 746
Query: 305 GHLDMAKKVYSAMLGR 320
L++A + M+ +
Sbjct: 747 DELEVASGILHKMIDK 762
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 131/264 (49%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A+D F M GCK V + N + L + R + FL E+ ++ I ++
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR-GIPPNV 263
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N ++ FC +G L++A + EM V PD +T T L+ K+ ++
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFET 323
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PN++T+N + +R +A K+ +M R G P +YN++I GFC+S
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D AK + + M + L P+ Y T++ LCQ G A + K+ +P++ T S
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
LL+G K+ +A ++ +Q +
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEK 467
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 1/230 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M L+G V SLN + L + + L ++ K I +FN +I C G
Sbjct: 114 MDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMF-KLGIHPTASTFNALINGLCNEG 172
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ +A + EM + G +P+VI+Y T+I+ K + ++ M GC P++ T+N
Sbjct: 173 KIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYN 232
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L R A + + M GI P+ TYN ++ GFC G L+ A +++ M+GR
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+MP+ ++ LC+EG + A ++ + +K P++ T +AL++G
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 16/286 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-- 184
K GM+ A F M G + + + NA + D +Q + E + F I
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALM-------DGYCLQRLMNEAKKVFEIMIRQ 362
Query: 185 ----DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ S+NI+I FC+ +D+A ++ EM + PD +TY+TL+ + RP+
Sbjct: 363 GCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA 422
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ M G PNL T+++ + +A KL+ MQ +EP+ V + ++I+G
Sbjct: 423 LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEG 482
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+G L++AK+++S + + P + Y MI L +EG + AY + + ++P+
Sbjct: 483 MFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 542
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + +++G +N ++T + L+ V S LS F+ +L
Sbjct: 543 SCSYNVMIQGFLQNQD---SSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ +FY M + +V L + + + + ++ + F + +++S N
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLN 127
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I C + +D A ++ +M KLG+ P T+ LI+ + + + L+N MV +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN+ ++N I L + A + M++ G +PD VTYN +I C+ ++ A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ S ML R + PN Y M+H C G N A + K+ + ++ +P T++ L++G
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Query: 371 LKKNNQPCKANTIMALVQRR 390
L K +A + + +
Sbjct: 308 LCKEGMVSEARLVFETMTEK 327
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 85/155 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++I++ FC+ G LD+A ++ MQ+ ++P+++ +T LI + + E+ L+
Sbjct: 437 NLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELF 496
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + G P + T+ V I+ L+ + S +A L M+ G P+ +YN++I+GF ++
Sbjct: 497 SKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 556
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A ++ M+G+R N +Q ++ Q+
Sbjct: 557 QDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQD 591
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ A F M GC V S N + +SR + ++ L E+ K + D ++
Sbjct: 348 LMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK-ALNPDTVTY 406
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+ +++ C+ G +A + EM G+ P+++TY+ L+ F K + L M
Sbjct: 407 STLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQE 466
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K PN+ + I+ + + A +L + GI P TY ++IKG + G D
Sbjct: 467 KKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDE 526
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A ++ M +PN Y MI Q D + A + + + K + ++ T LL+
Sbjct: 527 AYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 165/364 (45%), Gaps = 47/364 (12%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKY-----AFEDTVSRLAGARRFDYIEHLL-EHQK 107
LK ++DP K ++F N++ E+ + ++ + +L F +E++L E +
Sbjct: 14 LKQQKDPLKALEMF-----NKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRM 68
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+ EG + M YG+ G ++ A+D F M Y C+ +V S NA + +L ES K
Sbjct: 69 DIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFK 128
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFC------------------------------ 197
+ + + I D+++F I IK+FC
Sbjct: 129 QAHKVFLRM-KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTV 187
Query: 198 -----EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
E +AY + +M ++G+ PDV T+ L+ K + L N ++ KG
Sbjct: 188 VAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGM 247
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
NL TFN+ IQ L K A ++ + R G+ PD VTYN +I G C++ ++ A+K
Sbjct: 248 CSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEK 307
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
++ L P+ Y T+I C+ G A + + ++ K +VP T +L+ GL
Sbjct: 308 YLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLC 367
Query: 373 KNNQ 376
+N++
Sbjct: 368 QNDE 371
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A + F DM G V + N L L + +++ + L +V +K ++F+FNI
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS-NLFTFNIF 257
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C G+L A ++ + + G+ PDV+TY TLI K++ + +V G
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+N I A K++ G PDE TY +I G C++ +D A
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++A LG+ L P +Y +I LCQEG A M + + + T + ++ GL
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Query: 373 KNNQPCKANTIM--ALVQRRVPH-FSSNQL 399
K AN +M A+ + VP F+ N L
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTL 467
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 161/379 (42%), Gaps = 56/379 (14%)
Query: 41 LVDKPLEPPALV---------KLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLA 91
LV+ LEP K+ ++ EK+ Q A + + +++ + S +
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ----GAICKGFVPDEFTY---CSLIN 364
Query: 92 GARRFDYIEHLLE-HQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKR 148
G + D I+ L +L +G + I+ M++ G + G+I A+ +M GC
Sbjct: 365 GLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSS 424
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ + N + L + + + + K ++ D+F+FN +I +C+ ++ +
Sbjct: 425 DIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVP-DVFTFNTLIDGYCKQLKMETTIQI 483
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M GV PDVITY ++++ K + E + MV KGC PN T+N+ + L
Sbjct: 484 LNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCK 543
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM----------- 317
+ +A L+ + GI PD V++ +I GF +G L A +++ M
Sbjct: 544 AGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTA 603
Query: 318 ----------------LGRRLM---------PNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+G +L P+ Y+ MI C G+ + Y +
Sbjct: 604 TYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEM 663
Query: 353 MKKNWVPSVDTISALLEGL 371
++K ++PS+ T ++ L
Sbjct: 664 IEKGFIPSLTTFGRVINCL 682
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +N++IK C+ G++ +A +M EM + G D+ TY +I+ K N L N
Sbjct: 391 VILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMN 450
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ KG P++ TFN I + + +++ M G+ PD +TYN V+ G ++
Sbjct: 451 DAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAV 510
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + + M+ + +PN+ Y + LC+ G N A + + + K P + +
Sbjct: 511 KNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFA 570
Query: 366 ALLEGLKKN 374
++ G N
Sbjct: 571 TIISGFANN 579
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ GM+ AM + G V + N + L ++ ++ + +L ++ ++ D
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG-GLEPDG 321
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N +I +C+MG+L A ++ G PD TY +LI+ +++ + L+N
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNA 381
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P + +N+ I+ L + QA ++M M G D TYNLVI G C+ G
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + + + + +P+ + T+I C++ + P V T ++
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501
Query: 367 LLEGLKK 373
+L GL K
Sbjct: 502 VLNGLSK 508
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI+ ++ C+ G +++A ++ E+ G+ PD +++ T+IS F + + G + L
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLK---GAYQLF 589
Query: 248 VCKG----CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
G AT+N+ I K KL M G PD TY ++I GFC
Sbjct: 590 RRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCI 649
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+G+ D K M+ + +P+ + +I+ LC
Sbjct: 650 TGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLC 683
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A+D ++ G S + + DLK + E++ +
Sbjct: 543 KAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTT 602
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I AF E L + +EM G PD TY +I F + G
Sbjct: 603 ATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLE 662
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
M+ KG P+L TF I L + R +A ++ M GI P+ V
Sbjct: 663 MIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 155/330 (46%), Gaps = 4/330 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P ++KL K+E++P +F + Y F + RL + ++ +
Sbjct: 6 KSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLT 161
+E ++ E + ++ Y K M A+D F MH ++GC+ ++S N+ L L
Sbjct: 66 VELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 125
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
ES ++F + E + ++ ++NI+IK C DKA ++ M + G PDV
Sbjct: 126 ESNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG- 280
+Y TLI++ K+ L++ M +G P++A +N+ I K A+++
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L++ + P+ +YN++I G C+ G D + +++ M + Y T+IH LC G
Sbjct: 245 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 304
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + A + K+ + P V + +L G
Sbjct: 305 NLDGATRVYKEMAENGVSPDVVVYNTMLNG 334
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 39/332 (11%)
Query: 78 ENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAM 135
++ Y + + L G+ D + +++ G ++ ML G +AG I+ +
Sbjct: 288 QDLYTYSTLIHGLCGSGNLDGATRV--YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF---------------------- 172
+ + M GC RTV S N ++ L E+ + +AI +
Sbjct: 346 ELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404
Query: 173 -----------LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++E E D F+++ +I C G LD+ V+ +M K G KP+
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+I+ F + ++ E + MV KGCFP + T+N I L R +A L+
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M G +P+ +TY+L++ G C+ LDMA ++ L + P+ K++ +IH LC G
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + ++ VP++ T + L+EG K
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYK 616
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
VIKA+ + + D+A + M ++ G +P + +Y +L++A + N+ + +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PNL T+N+ I+ K++ +A +L+ M G PD +Y +I ++G++ A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLE 369
K++ M R + P+ Y +I ++GD A + + +K V P++ + + ++
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 370 GLKK 373
GL K
Sbjct: 264 GLCK 267
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + M +GCK NA + + L+ F + K +
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP-TV 499
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + +AY ++ EM G KP++ITY+ L++ + + ++ LW
Sbjct: 500 VTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 559
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P++ N+ I L + + A +L M++ P+ VT+N +++GF +
Sbjct: 560 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRD 619
Query: 307 LDMAKKVYSAML 318
+ A K++ +L
Sbjct: 620 FERASKIWDHIL 631
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM-VCKGCFPNLATFNVRIQHLV 267
++ QK DV T+I A+ K++ P+ ++ M GC P + ++N + L+
Sbjct: 68 LIRTQKCKCPEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 125
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ +A + G+ P+ TYN++IK CR D AK++ + M + P+
Sbjct: 126 ESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF 185
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
Y T+I+ L + G + A + + ++ P V + L++G K A+ I
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 161/326 (49%), Gaps = 5/326 (1%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A+ +K ERDP+ +F + + N + + LA ++F I+ +L HQ +
Sbjct: 53 AIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVL-HQMTY 111
Query: 110 PQGR-REGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLK 167
+ EG + +M + K+ M + +D FY + + K ++K+++ L +L ES +
Sbjct: 112 DTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVD 171
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTT 226
+ L+ K +++ + FNI++K C G L A+ V+ EM+ V P+++TY+T
Sbjct: 172 LARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYST 231
Query: 227 LISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI ++ + + + MV K P+ T+N+ I + + +A ++ M+
Sbjct: 232 LIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSN 291
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G P+ Y++++ G+C+ G L AK+V++ + + P+ Y T+I+ LC+ G + A
Sbjct: 292 GCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEA 351
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ + K+ T + +L GL
Sbjct: 352 TELLQQMKDKDCRADTVTFNVMLGGL 377
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L E+ LK F E+ K +I D ++NI+I FC+ G +D+A ++ M+ G P
Sbjct: 236 LCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSP 295
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+V Y+ L++ + K+ R + ++N + G P+ ++ I L R +A +L+
Sbjct: 296 NVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELL 355
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M+ D VT+N+++ G CR G D A + + N+ Y+ ++++L Q+
Sbjct: 356 QQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQK 415
Query: 340 GDFNLAYIMCKDSMKKNWVP 359
G+ A + + + +VP
Sbjct: 416 GELRKATELLGLMLNRGFVP 435
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F++++++ +C+ G L +A V E++ LG+KPD I+YTTLI+ + R + L
Sbjct: 296 NVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELL 355
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K C + TFNV + L + R +A ++ + G ++ +Y +V+ +
Sbjct: 356 QQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQK 415
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G L A ++ ML R +P+ T++ LC G
Sbjct: 416 GELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNG 451
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 160/325 (49%), Gaps = 8/325 (2%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
P + +K +DP + LF+ N H + + ++ + +LA +RRF+ +E +L H ++
Sbjct: 51 PFVTDVKEVKDPCEALALFE-NYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRN 109
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-K 167
E + ++ YGKA +++ ++ F+ M + C RT++S N L L + K
Sbjct: 110 RNIRCNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSK 169
Query: 168 AIQAFLMEVPEKFHIQF--DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
A + F + + + F + S+NI+IK + + G ++A + EM + GV+P V+TY
Sbjct: 170 ASEIF----QQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYN 225
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+ + + + L+ M KG PN T+ + ++ + +A KLM M+
Sbjct: 226 SFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 285
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G + V Y +++ ++G++D + + + M RRL P+ Y +++YLC+EG A
Sbjct: 286 GCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDA 345
Query: 346 YIMCKDSMKKNWVPSVDTISALLEG 370
Y + P+ T +++G
Sbjct: 346 YKVLVKMQVGGCDPNAATYRMMIDG 370
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
+K ERDP+ ++F + N + + +LA A++F ++ LL
Sbjct: 57 IKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKF 116
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
E + +M + K+ + ++ F + + K ++K+++ L +L ES+ + ++ F
Sbjct: 117 HESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGF 176
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAF 231
L+++ + ++ + FNI IK C+ G L+ A+ V+ EM+K + P++ITY+TL+
Sbjct: 177 LLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGL 236
Query: 232 YKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSW----QANKLMGLMQRFG 286
+ R + L+ MV K P+ T+NV L+N W +A K+M M+ G
Sbjct: 237 CESGRLKEAIELFEEMVSKDQILPDALTYNV----LINGFSCWGKVDRAKKIMEFMKSNG 292
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
P+ Y+ ++ GFC+ G L+ A + M L + Y +I+Y C+ G + A
Sbjct: 293 CSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAM 352
Query: 347 IMCKDSMKKNWVPSVDTISALLEGL 371
+ ++ + + T++ LL G
Sbjct: 353 ALLEEMKETKCKADIVTVNVLLRGF 377
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 134/311 (43%), Gaps = 15/311 (4%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF----DYIEHLLEHQKSLPQGRR 114
D E F + K + I N + + L + R + E ++ + LP
Sbjct: 205 DLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALT 264
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFL 173
++ +GK K M+ M GC V + +A + E R +A+ AF
Sbjct: 265 YNVLINGFSCWGKVDRAKKIMEF---MKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAF- 320
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E + F ++ D + I+I FC G +D+A ++ EM++ K D++T L+ F
Sbjct: 321 -EEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCG 379
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ R E G+ N + +G + N A++ + + L K +A +L+GL G P T
Sbjct: 380 EGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHAT 439
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
N ++ G C++G D A + P + + ++ ++C+E LA+ + D +
Sbjct: 440 SNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELL-DEL 498
Query: 354 KKN----WVPS 360
N +VPS
Sbjct: 499 TANECEDFVPS 509
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+++ ++ FC+ G L++A EM+ G+K D + YT LI+ F + R + L
Sbjct: 296 NVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALL 355
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C ++ T NV ++ + R+ +A ++ + GI ++ +Y +V+ C+
Sbjct: 356 EEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQK 415
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ L R +P+ ++ LC+ G + A + + + P D+
Sbjct: 416 GDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSW 475
Query: 365 SALLE 369
+ L+E
Sbjct: 476 ALLVE 480
>gi|38344321|emb|CAE02149.2| OSJNBa0058K23.3 [Oryza sativa Japonica Group]
gi|38345611|emb|CAD41894.2| OSJNBa0093O08.13 [Oryza sativa Japonica Group]
Length = 368
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 4/329 (1%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P L+K+ A RDP + FK R N+ + + RLA RRF +E LL
Sbjct: 36 LSPNELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLA 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
++ + F R++ +YG A + A++T + M Y C + K+ N L +L
Sbjct: 96 RARAERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCK 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + + + + + D FNI++K C+ G A ++ EM K G P+V T
Sbjct: 156 RQYEVVHEVYLSA-SRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTT 214
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+TL++ + + + L M + + +N+ I L ++R +A L M
Sbjct: 215 YSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMV 274
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G P+ TY +++ G SG AK + S M R+ P ++ +I LC +
Sbjct: 275 PKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLD 334
Query: 344 LAYIMCKDSMKKNWVPS-VDTISALLEGL 371
A+++ K +++ +VP + T+ L GL
Sbjct: 335 DAHLVLKQMVEQGFVPRLIFTLIVLPSGL 363
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N PE M C+P+ TFN + LV KR+ +++ R G+ D +
Sbjct: 121 NHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCF 180
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N+++KG C+ G A + M + +PN Y T++++LCQ G + A+ +C+ K
Sbjct: 181 NILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQK 240
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKA 380
++ V + L+ GL + + +A
Sbjct: 241 EDIVADAVVYNILIAGLCREQRVTEA 266
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+ FN+ ++ L + A L+ M + G P+ TY+ ++ C+ G +D A ++
Sbjct: 176 DTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELC 235
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
M ++ + +Y +I LC+E A+ + K + K P+ T LL+GL +
Sbjct: 236 ERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSS 295
Query: 375 NQPCKANTIMALV--QRRVPHFSSNQL 399
+ +A +++++ +R P FSS +L
Sbjct: 296 GKFVEAKGLVSMMRAERMRPGFSSFKL 322
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++A DTF M YG TV+S NA L L AF E+ + I + ++ N
Sbjct: 184 FRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREM-RRSRIYPNSYTLN 242
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+VI A C++G LDKA +V EM +G P+V +Y TLI+ + L ++M
Sbjct: 243 LVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKN 302
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ TFN + + +A+KL G M+ + P VTYN++I G+ ++G+ +M
Sbjct: 303 GVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMG 362
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ M ++ + Y +I LC+EG A + ++ +K VP+ T SAL+ G
Sbjct: 363 NRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYG 422
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 10/281 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A F +M G V S N + ++ L + L V EK + D+
Sbjct: 250 KLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYC-NKGLLSSAMKLRSVMEKNGVPPDV 308
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN ++ FC++G L +A + EM+ + + P +TY LI+ + K E+GN L+
Sbjct: 309 VTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEE 368
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M ++ T+N I L + ++ +A L+ + G+ P+ T++ +I G C
Sbjct: 369 MSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQ 428
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++Y +M+ P + ++ ++ C+ D++ A + ++ + ++ P V+ +
Sbjct: 429 SERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYE 488
Query: 367 LLEGLKKNNQPCKANTIMAL-----VQRRVPHFSSNQLSAF 402
L GL Q K T M L QR +P ++L AF
Sbjct: 489 LCAGL---GQCGKVKTAMMLCSELEAQRLLPE-GFDKLKAF 525
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 13/289 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQF 184
K+G ++ A F MH C V + + L + L +AI+ L+++ +
Sbjct: 112 KSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE--LLDLMNETGCCP 169
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++++++ C+ G DK + ++ EM + G +PDVI Y TL++ K R + L
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM+ GC+P + T+N ++ ++ +A +L+ +M G PD + YN VI G CR
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ----EGDFNL-AYIMCKDSMKKNWV- 358
LD A+ + M+ R +P+ Y T+I LC+ + D+ L A + MK+
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
P+ T + ++EGL + K+ +AL++R + LS+F ++
Sbjct: 350 PNAGTYAVVIEGLCRAR---KSQQALALLRRMIDSEVVPDLSSFSMVIG 395
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + V L A R D LL Q+ +G + IM +L G K+ + A++
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLL--QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKA 195
M GC TV + N+ +++ S+ + +AF L++V + D+ ++N VI
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVD--RAFRLIQVMSERGCPPDVINYNTVIAG 285
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------EIGNGLWNLMVC 249
C LD A ++ +M PDVITY+T+I KD R E + +M
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQ 345
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GC PN T+ V I+ L R+S QA L+ M + PD ++++VI C+S LD
Sbjct: 346 TGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDA 405
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A K++ M R PN Y +I L + G+ + A + + M +++ P V T +++L+
Sbjct: 406 AYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPGVATYNSVLD 464
Query: 370 GL 371
GL
Sbjct: 465 GL 466
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 13/336 (3%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
E+ FQ+F++ + + N + ++ L + D LL+ G I
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE--TGCCPNVITY 174
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVP 177
+++ G KAG +M G + V N L L +SR L +A++ L+++
Sbjct: 175 SVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE--LVQLM 232
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ + ++N +++ FC +D+A+ ++ M + G PDVI Y T+I+ +D R
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR---SWQ---ANKLMGLMQRFGIEPDE 291
+ L MV C P++ T++ I L R W+ A +++ +M++ G P+
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TY +VI+G CR+ A + M+ ++P+ + +I LC+ D + AY +
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGM 412
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
++ P+ +AL++GL K + KA + L+
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Query: 153 LNAALKVLTES-RDLKAIQAFLME--VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
+N AL +L + + +A+Q F E VP +F ++ +I C+ G LD+AY ++
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERCVPNEF-------TYGSLIHGLCKAGKLDQAYELL 53
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
EM+ G+ P V + +I K R G + + C P++ TFN+ + LV
Sbjct: 54 DEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKS 113
Query: 270 RRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R +A ++ M P+ VTY VI G C+ G LD A ++ M PN
Sbjct: 114 GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVIT 173
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y ++ LC+ G + + + ++ ++ + P V + LL GL K+ + +A ++ L+
Sbjct: 174 YSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMI 233
Query: 389 R 389
R
Sbjct: 234 R 234
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 86/222 (38%), Gaps = 35/222 (15%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A + M GC + ++ L +R + A L + + + D+ SF+
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS-EVVPDLSSFS 391
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN--------------- 235
+VI + C+ LD AY + M + KP+ + Y LI K
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES 451
Query: 236 -RPEIG------NGLWNL------------MVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
RP + +GL + M+ K CFP+ A++ I+ L +A
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+L ++ G + YN+++ C+ L A V + ++
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 13/289 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQF 184
K+G ++ A F MH C V + + L + L +AI+ L+++ +
Sbjct: 112 KSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE--LLDLMNETGCCP 169
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++++++ C+ G DK + ++ EM + G +PDVI Y TL++ K R + L
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM+ GC+P + T+N ++ ++ +A +L+ +M G PD + YN VI G CR
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ----EGDFNL-AYIMCKDSMKKNWV- 358
LD A+ + M+ R +P+ Y T+I LC+ + D+ L A + MK+
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
P+ T + ++EGL + K+ +AL++R + LS+F ++
Sbjct: 350 PNAGTYAVVIEGLCRAR---KSQQALALLRRMIDSEVVPDLSSFSMVIG 395
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + V L A R D LL Q+ +G + IM +L G K+ + A++
Sbjct: 170 NVITYSVLVEGLCKAGRTDKGFTLL--QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKA 195
M GC TV + N+ +++ S+ + +AF L++V + D+ ++N VI
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVD--RAFRLIQVMSERGCPPDVINYNTVIAG 285
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------EIGNGLWNLMVC 249
C LD A ++ +M PDVITY+T+I KD R E + +M
Sbjct: 286 LCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQ 345
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GC PN T+ V I+ L R+S QA L+ M + PD ++++VI C+S LD
Sbjct: 346 TGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDA 405
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A K++ M R PN Y +I L + G+ + A + + M +++ P V T +++L+
Sbjct: 406 AYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPGVATYNSVLD 464
Query: 370 GL 371
GL
Sbjct: 465 GL 466
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 13/336 (3%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
E+ FQ+F++ + + N + ++ L + D LL+ G I
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE--TGCCPNVITY 174
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVP 177
+++ G KAG +M G + V N L L +SR L +A++ L+++
Sbjct: 175 SVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE--LVQLM 232
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ + ++N +++ FC +D+A+ ++ M + G PDVI Y T+I+ +D R
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR---SWQ---ANKLMGLMQRFGIEPDE 291
+ L MV C P++ T++ I L R W+ A +++ +M++ G P+
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TY +VI+G CR+ A + M+ ++P+ + +I LC+ D + AY +
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGM 412
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
++ P+ +AL++GL K + KA + L+
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Query: 153 LNAALKVLTES-RDLKAIQAFLME--VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
+N AL +L + + +A+Q F E VP +F ++ +I C+ G LD+AY ++
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERCVPNEF-------TYGSLIHGLCKAGKLDQAYELL 53
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
EM+ G+ P V + +I K R G + + C P++ TFN+ + LV
Sbjct: 54 DEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKS 113
Query: 270 RRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R +A ++ M P+ VTY VI G C+ G LD A ++ M PN
Sbjct: 114 GRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVIT 173
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y ++ LC+ G + + + ++ ++ + P V + LL GL K+ + +A ++ L+
Sbjct: 174 YSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMI 233
Query: 389 R 389
R
Sbjct: 234 R 234
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 86/222 (38%), Gaps = 35/222 (15%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A + M GC + ++ L +R + A L + + + D+ SF+
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS-EVVPDLSSFS 391
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN--------------- 235
+VI + C+ LD AY + M + KP+ + Y LI K
Sbjct: 392 MVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES 451
Query: 236 -RPEIG------NGLWNL------------MVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
RP + +GL + M+ K CFP+ A++ I+ L +A
Sbjct: 452 FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+L ++ G + YN+++ C+ L A V + ++
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 148/312 (47%), Gaps = 38/312 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+I HA+ +M GC +++ N + L + ++ + + K ++ D+F+
Sbjct: 374 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP-DVFT 432
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I +C+ LD A ++ M + G+ PD ITY ++++ K + N + M+
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC PN T+N+ I++ + +A+K++ M + G+ PD V++N +I GFCR+G L+
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552
Query: 309 -----------------------------------MAKKVYSAMLGRRLMPNRKIYQTMI 333
MA+K++ ML + + Y+ +I
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR--RV 391
C+ + + AY+ + +KK ++PS+ T ++ L N++ +A I+ ++ + V
Sbjct: 613 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 672
Query: 392 PHFSSNQLSAFK 403
P L+A K
Sbjct: 673 PEVVDTILNADK 684
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 45/338 (13%)
Query: 107 KSLPQGRREGFIMRIMMLY--GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
++LP + + LY G + D H++ + + N L L +
Sbjct: 144 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVF---PNLAAFNKVLHALCKRG 200
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D+ L +V ++ + ++F++NI I+ CE G L +A ++ M+ V PDV+TY
Sbjct: 201 DVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTY 258
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM----- 279
TLI K + P+ M+ +GC P+ T+N I +A +L+
Sbjct: 259 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF 318
Query: 280 ---------------GL---------------MQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GL Q GI+PD V YN ++KG C G +
Sbjct: 319 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 378
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +V + M P+ + Y +I+ LC+ G+ + A ++ D++ K ++P V T + L++
Sbjct: 379 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 438
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
G K K ++ + LV+R + + + S+L+
Sbjct: 439 GYCKR---LKLDSALQLVERMWEYGIAPDTITYNSVLN 473
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 36/279 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K M++ A + D G + + + L D++ E K I+
Sbjct: 300 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK-GIKP 358
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +N ++K C G++ A VM EM + G PD+ TY +I+ K +
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG---- 300
N + KG P++ TFN I + + A +L+ M +GI PD +TYN V+ G
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478
Query: 301 -------------------------------FCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
FCRS ++ A KV M L P+ +
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
T+I+ C+ GD AY++ + +K + + DT + L+
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I +C++ ++ +A ++ + G PD +TY +LI+ + E L+
Sbjct: 289 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 348
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N KG P++ +N ++ L + A ++M M G PD TYN+VI G C+
Sbjct: 349 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 408
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A V + + + +P+ + T+I C+ + A + + + P T
Sbjct: 409 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 468
Query: 365 SALLEGLKKNNQPCKANTI 383
+++L GL CKA +
Sbjct: 469 NSVLNGL------CKAGKV 481
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G +++A + E Q G+KPD++ Y +L+ +
Sbjct: 324 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +GC P++ T+N+ I L A +M G PD T+N +I G+C+
Sbjct: 384 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A ++ M + P+ Y ++++ LC+ G N ++ + K P+ T
Sbjct: 444 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 503
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ L+E ++N+ +A+ ++ + + H
Sbjct: 504 NILIENFCRSNKMEEASKVIVKMSQEGLH 532
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 20/256 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG ++ A+D F M L+ C + NA + L + A + K +++
Sbjct: 60 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDAL--------VDAAYHDQAHKVYVRM 111
Query: 185 -------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
D+ + I +++FC + + ++ + ++ L + + Y T++ Y
Sbjct: 112 LAAGVSPDLHTHTIRLRSFC---LTARPHIALRLLRALPHR-GAVAYCTVVCGLYAHGHT 167
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ FPNLA FN + L + +A L+G + + G+ + TYN+
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I+G C +G L A ++ M + P+ Y T+I LC++ A + M +
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 358 VPSVDTISALLEGLKK 373
+P T + +++G K
Sbjct: 287 LPDDFTYNTIIDGYCK 302
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + A+ M YG + N+ L L ++ + + E+ K
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK-GCHP 498
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++NI+I+ FC +++A V+V+M + G+ PD +++ TLI F ++ E L+
Sbjct: 499 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 558
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG TFN I K A K+ M G D TY ++I G C++
Sbjct: 559 QKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKT 618
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
++D A M+ + +P+ + +I+ L
Sbjct: 619 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++YG + G ++ A F + G T + N + + ++ + E+ K
Sbjct: 541 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 600
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H + D +++ ++I C+ +D+AY+ +VEM K G P + T+ +I++ ++R
Sbjct: 601 H-RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 659
Query: 241 NGLWNLMVCKGCFPNL 256
G+ ++MV G P +
Sbjct: 660 VGIIHIMVKIGVVPEV 675
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 148/312 (47%), Gaps = 38/312 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+I HA+ +M GC +++ N + L + ++ + + K ++ D+F+
Sbjct: 377 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP-DVFT 435
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I +C+ LD A ++ M + G+ PD ITY ++++ K + N + M+
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC PN T+N+ I++ + +A+K++ M + G+ PD V++N +I GFCR+G L+
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555
Query: 309 -----------------------------------MAKKVYSAMLGRRLMPNRKIYQTMI 333
MA+K++ ML + + Y+ +I
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR--RV 391
C+ + + AY+ + +KK ++PS+ T ++ L N++ +A I+ ++ + V
Sbjct: 616 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 675
Query: 392 PHFSSNQLSAFK 403
P L+A K
Sbjct: 676 PEVVDTILNADK 687
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 45/338 (13%)
Query: 107 KSLPQGRREGFIMRIMMLY--GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
++LP + + LY G + D H++ + + N L L +
Sbjct: 147 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVF---PNLAAFNKVLHALCKRG 203
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D+ L +V ++ + ++F++NI I+ CE G L +A ++ M+ V PDV+TY
Sbjct: 204 DVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTY 261
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM----- 279
TLI K + P+ M+ +GC P+ T+N I +A +L+
Sbjct: 262 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF 321
Query: 280 ---------------GL---------------MQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GL Q GI+PD V YN ++KG C G +
Sbjct: 322 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 381
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +V + M P+ + Y +I+ LC+ G+ + A ++ D++ K ++P V T + L++
Sbjct: 382 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 441
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
G K K ++ + LV+R + + + S+L+
Sbjct: 442 GYCKR---LKLDSALQLVERMWEYGIAPDTITYNSVLN 476
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 36/279 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K M++ A + D G + + + L D++ E K I+
Sbjct: 303 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK-GIKP 361
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +N ++K C G++ A VM EM + G PD+ TY +I+ K +
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG---- 300
N + KG P++ TFN I + + A +L+ M +GI PD +TYN V+ G
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481
Query: 301 -------------------------------FCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
FCRS ++ A KV M L P+ +
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
T+I+ C+ GD AY++ + +K + + DT + L+
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I +C++ ++ +A ++ + G PD +TY +LI+ + E L+
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 351
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N KG P++ +N ++ L + A ++M M G PD TYN+VI G C+
Sbjct: 352 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 411
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A V + + + +P+ + T+I C+ + A + + + P T
Sbjct: 412 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 471
Query: 365 SALLEGLKKNNQPCKAN 381
+++L GL K + + N
Sbjct: 472 NSVLNGLCKAGKVNEVN 488
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G +++A + E Q G+KPD++ Y +L+ +
Sbjct: 327 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 386
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +GC P++ T+N+ I L A +M G PD T+N +I G+C+
Sbjct: 387 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 446
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A ++ M + P+ Y ++++ LC+ G N ++ + K P+ T
Sbjct: 447 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 506
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ L+E ++N+ +A+ ++ + + H
Sbjct: 507 NILIENFCRSNKMEEASKVIVKMSQEGLH 535
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR-DLKAIQAFLMEVPEKFHIQ 183
Y +AG ++ A+D F M L+ C + NA + L ++ +A + ++ + +
Sbjct: 63 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAG--VS 120
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ + I +++FC + + ++ + ++ L + + Y T++ Y L
Sbjct: 121 PDLHTHTIRLRSFC---LTARPHIALRLLRALPHR-GAVAYCTVVCGLYAHGHTHDARQL 176
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ FPNLA FN + L + +A L+G + + G+ + TYN+ I+G C
Sbjct: 177 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 236
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G L A ++ M + P+ Y T+I LC++ A + M + +P T
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 364 ISALLEGLKK 373
+ +++G K
Sbjct: 296 YNTIIDGYCK 305
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
YG + N+ L L ++ + + E+ K + ++NI+I+ FC ++
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK-GCHPNPITYNILIENFCRSNKME 520
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V+V+M + G+ PD +++ TLI F ++ E L+ + KG TFN I
Sbjct: 521 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
K A K+ M G D TY ++I G C++ ++D A M+ + +
Sbjct: 581 GAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 640
Query: 324 P--------------NRKIYQT--MIHYLCQEG---------------DFNLAYIMCKDS 352
P N +++Q +IH + + G + I+ +D
Sbjct: 641 PSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDL 700
Query: 353 MKKNWVPSVDTISALLEGLKKN 374
MKK + S T L EG++ N
Sbjct: 701 MKKGHI-SYPTYEVLHEGVRDN 721
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++YG + G ++ A F + G T + N + + ++ + E+ K
Sbjct: 544 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 603
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H + D +++ ++I C+ +D+AY+ +VEM K G P + T+ +I++ ++R
Sbjct: 604 H-RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 662
Query: 241 NGLWNLMVCKGCFPNL 256
G+ ++MV G P +
Sbjct: 663 VGIIHIMVKIGVVPEV 678
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 7/281 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ F DM GC +V + + L + K L E+ K + DI +
Sbjct: 174 GCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSK-GCEPDIVT 232
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N++I A C G + +A V+ + G KPD +TYT ++ + R E + L M
Sbjct: 233 YNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMF 292
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C P+ TFN I L K +A K++ M G PD +TY+ ++ G C+ +D
Sbjct: 293 SNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVD 352
Query: 309 MA----KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
A K++ + M+ + +P++ + T+I LCQ+G F+ A + + + +P + T
Sbjct: 353 EAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
+ +++G + CK + L+ V + + +KS+
Sbjct: 413 NCIVDGFL--CKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G T+ + N + + ++ A + + VP D F++N +I+A C G +
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAARRMIDSVP----FAPDTFTYNPLIRALCVRGCVLD 178
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V +M G P V+TY+ L+ A K++ + L + M KGC P++ T+NV I
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ ++ +A K++ + +G +PD VTY V+K C S + A K+ + M P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + +I LCQ+G A + + P + T S++++GL K
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCK 347
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ + + L + R++ + LL S E ++ + G + A
Sbjct: 264 DAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVL 323
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESR----DLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
M +GC + + ++ + L + R +K ++ L E+ K I D +FN +I
Sbjct: 324 AQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP-DQVTFNTIIT 382
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY-KDNRPEIGNGLWNLMVCKGCF 253
+ C+ G+ D+A V+ EM + G PD+ TY ++ F K + E L NLMV G
Sbjct: 383 SLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLC 442
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+ L + +A + +Q G+ PD++ YN ++ G C+ D+A
Sbjct: 443 PDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDF 502
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++ M+ MP+ Y ++ + EG
Sbjct: 503 FAYMVSNGCMPDESTYIILVEGIAYEG 529
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 41/283 (14%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ + YGCK + LK L S + L ++ D +
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN-DCAPDEVT 302
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE----IGNGLW 244
FN VI + C+ G + +A V+ +M + G PD+ITY++++ K+ R + + L
Sbjct: 303 FNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELL 362
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKR---------------------------------- 270
MV K C P+ TFN I L K
Sbjct: 363 AEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCK 422
Query: 271 --RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
++ +A L+ LM G+ PD TY + G R ++ A ++ + L P++ +
Sbjct: 423 SCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKML 482
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y ++ LC++ +LA + +P T L+EG+
Sbjct: 483 YNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 38/253 (15%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-----------D 234
+ NI+IK C G + A V+ + LG +ITY T+++ + + D
Sbjct: 96 VIPCNILIKKLCADGRVADAERVV---EALGPSATIITYNTMVNGYCRAGNIDAARRMID 152
Query: 235 NRPEIGN---------------------GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+ P + +++ M+ +GC P++ T+++ + +
Sbjct: 153 SVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYK 212
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
QA L+ M+ G EPD VTYN++I C G + A KV +++ P+ Y ++
Sbjct: 213 QAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVL 272
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
LC + A + + P T +A++ L + +A ++A + H
Sbjct: 273 KSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSE---H 329
Query: 394 FSSNQLSAFKSIL 406
+ + + SI+
Sbjct: 330 GCTPDIITYSSIM 342
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P + N+ I+ L R A +++ + G +TYN ++ G+CR+G++D A+++
Sbjct: 94 PAVIPCNILIKKLCADGRVADAERVV---EALGPSATIITYNTMVNGYCRAGNIDAARRM 150
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ P+ Y +I LC G A + D + + PSV T S LL+ K
Sbjct: 151 IDSV---PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCK 207
Query: 374 NN 375
+
Sbjct: 208 ES 209
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 148/312 (47%), Gaps = 38/312 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+I HA+ +M GC +++ N + L + ++ + + K ++ D+F+
Sbjct: 375 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLP-DVFT 433
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I +C+ LD A ++ M + G+ PD ITY ++++ K + N + M+
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC PN T+N+ I++ + +A+K++ M + G+ PD V++N +I GFCR+G L+
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553
Query: 309 -----------------------------------MAKKVYSAMLGRRLMPNRKIYQTMI 333
MA+K++ ML + + Y+ +I
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR--RV 391
C+ + + AY+ + +KK ++PS+ T ++ L N++ +A I+ ++ + V
Sbjct: 614 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 673
Query: 392 PHFSSNQLSAFK 403
P L+A K
Sbjct: 674 PEVVDTILNADK 685
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 45/338 (13%)
Query: 107 KSLPQGRREGFIMRIMMLY--GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
++LP + + LY G + D H++ + + N L L +
Sbjct: 145 RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVF---PNLAAFNKVLHALCKRG 201
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D+ L +V ++ + ++F++NI I+ CE G L +A ++ M+ V PDV+TY
Sbjct: 202 DVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTY 259
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM----- 279
TLI K + P+ M+ +GC P+ T+N I +A +L+
Sbjct: 260 NTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVF 319
Query: 280 ---------------GL---------------MQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GL Q GI+PD V YN ++KG C G +
Sbjct: 320 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILH 379
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +V + M P+ + Y +I+ LC+ G+ + A ++ D++ K ++P V T + L++
Sbjct: 380 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 439
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
G K K ++ + LV+R + + + S+L+
Sbjct: 440 GYCKR---LKLDSALQLVERMWEYGIAPDTITYNSVLN 474
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 36/279 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K M++ A + D G + + + L D++ E K I+
Sbjct: 301 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK-GIKP 359
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +N ++K C G++ A VM EM + G PD+ TY +I+ K +
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG---- 300
N + KG P++ TFN I + + A +L+ M +GI PD +TYN V+ G
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479
Query: 301 -------------------------------FCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
FCRS ++ A KV M L P+ +
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
T+I+ C+ GD AY++ + +K + + DT + L+
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I +C++ ++ +A ++ + G PD +TY +LI+ + E L+
Sbjct: 290 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 349
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N KG P++ +N ++ L + A ++M M G PD TYN+VI G C+
Sbjct: 350 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 409
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A V + + + +P+ + T+I C+ + A + + + P T
Sbjct: 410 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 469
Query: 365 SALLEGLKKNNQPCKANTI 383
+++L GL CKA +
Sbjct: 470 NSVLNGL------CKAGKV 482
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G +++A + E Q G+KPD++ Y +L+ +
Sbjct: 325 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 384
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +GC P++ T+N+ I L A +M G PD T+N +I G+C+
Sbjct: 385 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 444
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A ++ M + P+ Y ++++ LC+ G N ++ + K P+ T
Sbjct: 445 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 504
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ L+E ++N+ +A+ ++ + + H
Sbjct: 505 NILIENFCRSNKMEEASKVIVKMSQEGLH 533
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 20/256 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG ++ A+D F M L+ C + NA + L + A + K +++
Sbjct: 61 YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDAL--------VDAAYHDQAHKVYVRM 112
Query: 185 -------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
D+ + I +++FC + + ++ + ++ L + + Y T++ Y
Sbjct: 113 LAAGVSPDLHTHTIRLRSFC---LTARPHIALRLLRALPHR-GAVAYCTVVCGLYAHGHT 168
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ FPNLA FN + L + +A L+G + + G+ + TYN+
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I+G C +G L A ++ M + P+ Y T+I LC++ A + M +
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 358 VPSVDTISALLEGLKK 373
+P T + +++G K
Sbjct: 288 LPDDFTYNTIIDGYCK 303
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + A+ M YG + N+ L L ++ + + E+ K
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK-GCHP 499
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++NI+I+ FC +++A V+V+M + G+ PD +++ TLI F ++ E L+
Sbjct: 500 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 559
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG TFN I K A K+ M G D TY ++I G C++
Sbjct: 560 QKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKT 619
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
++D A M+ + +P+ + +I+ L
Sbjct: 620 ANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++YG + G ++ A F + G T + N + + ++ + E+ K
Sbjct: 542 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 601
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H + D +++ ++I C+ +D+AY+ +VEM K G P + T+ +I++ ++R
Sbjct: 602 H-RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 660
Query: 241 NGLWNLMVCKGCFPNL 256
G+ ++MV G P +
Sbjct: 661 VGIIHIMVKIGVVPEV 676
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQ 183
Y + +I A+ + +G V S NA L S R++ + E+ + +
Sbjct: 144 YSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQS-QVS 202
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++F++NI+I+ FC G LD A M+K G P+V+TY TLI + K + + G L
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M KG PNL ++NV I L + R + + ++ M + G DEVTYN +IKG+C+
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G+ A +++ ML L P+ Y ++IH +C+ G+ N A + P+ T
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382
Query: 364 ISALLEGLKK 373
+ L++G +
Sbjct: 383 YTTLVDGFSQ 392
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 20/279 (7%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
AG + A+ DM G V S + L S D+ ++ K I+ D
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK-GIKPDTI 486
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I+ FCE +A + EM ++G+ PD TYT LI+A+ + + L N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVI------- 298
V KG P++ T++V I L + R+ +A +L L++ F E P +VTY+ +I
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRL--LLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 299 --------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
KGFC G + A +V+ +ML + P+ Y MIH C+ GD AY + K
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYK 664
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ +K ++ T+ AL++ L K + + N+++A V R
Sbjct: 665 EMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLR 703
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 4/257 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K I + M L G + + S N + L +K I L E+ ++ +
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGY-SL 308
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +IK +C+ G +A ++ EM + G+ P VITYT+LI + K
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ + K +A +++ M G P VTYN +I G C +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V M + L P+ Y T++ C+ D + A + + + K P T
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488
Query: 365 SALLEGL---KKNNQPC 378
S+L++G ++ + C
Sbjct: 489 SSLIQGFCEQRRTKEAC 505
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 189 FNIVIKAFCEMGILDKAYL------------------------------------VMVEM 212
F++V+K++ + ++DKA V EM
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ V P+V TY LI F ++ ++ M KGC PN+ T+N I R+
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+L+ M G+EP+ ++YN+VI G CR G + V + M R + Y T+
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
I C+EG+F+ A +M + ++ PSV T ++L+ + K +A L Q RV
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF--LDQMRVR 374
Query: 393 HFSSNQ 398
N+
Sbjct: 375 GLCPNE 380
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++ F + G +++AY V+ EM G P V+TY LI+ + + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRS 304
KG P++ +++ + RS+ ++ + + ++ GI+PD +TY+ +I+GFC
Sbjct: 442 KEKGLTPDVVSYSTVLSGFC---RSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ 498
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
A ++ ML L P+ Y +I+ C EGD A + + ++K +P V T
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTY 558
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K + +A ++
Sbjct: 559 SVLINGLNKQARTREAKRLL 578
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++NI+I C+ G + KA + M + GV+ V+TYT+LI A K + + + L+
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ V +G P+L +N I +A ++MG M++ I PD+VTYN +++G C
Sbjct: 273 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 332
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A+K+ M R + P+ Y T+I +GD A + + M K + P++ T
Sbjct: 333 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 392
Query: 365 SALLEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSILSKS 409
+AL++GL KN Q A N + +V+ + S +S + + ++
Sbjct: 393 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 438
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ F +M G + TV + + + L++ ++ E + I+ D+
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR-GIRPDL 284
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I + G +D+A+ +M EM+K + PD +TY TL+ R + L +
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 344
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+L T+N I K A ++ M G P +TYN +I+G C++G
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 404
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
D A+ + M+ + P+ Y ++I L E
Sbjct: 405 GDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITY 224
++A + E+ E+ I + +++ VI +C++G +D+A V EM G VKP+ + Y
Sbjct: 88 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 147
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI + + + + MV +G +AT+N+ + L R +A +L+ M
Sbjct: 148 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 207
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD TYN++I G C+ G++ A +++ M R + Y ++I+ L ++G
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++++ P + +AL+ + +A IM ++++
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 313
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
TFN+ ++HL + + +A +L+ M R P+ VTYN VI GFC G + A +
Sbjct: 42 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 97
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
M R + PN+ Y T+I C+ G + A + + + K V P +AL+ G
Sbjct: 98 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 153
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ M+ A++ F M G +V + N L L + R++ +F E+ + ++
Sbjct: 121 RENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIAN-RVSPNV 179
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ A CE G A +++ +M + G P +TY TL++ + K R + + L +
Sbjct: 180 ATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDA 239
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG ++ T+NV I L K RS + ++ M++ + P+E+TYN +I G + G
Sbjct: 240 MASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGK 299
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A KV+ M L+PN Y T+I C G+ A +C + P+ T A
Sbjct: 300 IGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGA 359
Query: 367 LLEGLKKNNQPCKANTI---MALVQRRVPHFS 395
LL G+ K+ Q +++ M + RV H S
Sbjct: 360 LLNGISKHAQFGLVSSVLERMRMDGVRVGHIS 391
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 162 ESRDLKAIQAFLMEVP-EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+S L FL ++ E F + D F+ N+++ CE + A+ ++ ++ LGV P+
Sbjct: 771 KSGSLDVAVKFLRKITVEGFKV--DCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPN 828
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY +L + F + + + + ++ G P F I+ + A +L
Sbjct: 829 VDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQD 888
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M+ G+ V + +I+G RS D A ++ ML +++P + T++H C+EG
Sbjct: 889 EMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEG 948
Query: 341 D 341
+
Sbjct: 949 N 949
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 3/262 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G K A+ F DM G + + N L + + + L + + + F++
Sbjct: 666 KEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSR-SLCFNL 724
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI++ + + + + + EM G PD +T+ +LI + K ++
Sbjct: 725 ATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRK 784
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +G + T NV + L + A L+ + G+ P+ TYN + GF R+
Sbjct: 785 ITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCS 844
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT-IS 365
D A+ + A+L P K + T+I +C+ G+ A + +D MK V S +S
Sbjct: 845 FDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMEL-QDEMKILGVSSQGVAMS 903
Query: 366 ALLEGLKKNNQPCKANTIMALV 387
A++ GL ++ + +A I+ ++
Sbjct: 904 AIIRGLARSRKTDEATRILGIM 925
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 113/277 (40%), Gaps = 17/277 (6%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
IK A D +++ G V + N+ + + L + E + F
Sbjct: 810 IKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAP-TCKQFT 868
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I+ C MG + A + EM+ LGV + + +I + + + + +M+
Sbjct: 869 TLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEM 928
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
P +ATF + + +A +L +M++ ++ D YN++I G C G + A
Sbjct: 929 QIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAA 988
Query: 311 KKVYSAMLGRRLMPNRKIYQTMI-HYLCQ-----EGDFNLAYIMCKDSMKKNWVPSVDTI 364
K+Y M R + PN IY +I +LC E + L + ++ M + ++ +
Sbjct: 989 FKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIEIL 1048
Query: 365 SALLEGLKK----------NNQPCKANTIMALVQRRV 391
+ LL +K PC N ++ +RR+
Sbjct: 1049 NELLMIARKELIHTRLTSHEQSPCSQNKVVDSAKRRL 1085
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+ ++ A M G P V T ++ + KD ++ + M+
Sbjct: 112 FDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMI 171
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN+ATFN+ + L + + A L+ M G P VTYN ++ +C+ G
Sbjct: 172 ANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYK 231
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISAL 367
A ++ AM + + + Y +I LC++ Y++ + M+KN V P+ T + L
Sbjct: 232 AASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILR-RMRKNMVYPNEITYNTL 290
Query: 368 LEGLKKNNQ 376
+ GL K +
Sbjct: 291 INGLVKEGK 299
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I + G + A V EM + P+ +TY TLI + E L ++M
Sbjct: 286 TYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVM 345
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G PN T+ + + + + ++ M+ G+ ++Y +I G C++G L
Sbjct: 346 VSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLL 405
Query: 308 DMAKKVYSAM-------------------LGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ A ++ M L L+PNR ++ T+I+ C+ G+ A
Sbjct: 406 EEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEA 462
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ +I C+ G+L++A ++ +M K+ V PD++T++ L++ F K
Sbjct: 391 SYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLK-------------- 436
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN + I + +A +M + G D T ++++ FCR G L
Sbjct: 437 --TGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRL 494
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ A+ M L P+ + +I GD
Sbjct: 495 EEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGD 528
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 98/242 (40%), Gaps = 36/242 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+ ++++ +FC G L++A + M ++G+ P +T+ +I + ++
Sbjct: 477 DHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVF 536
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-------------------NKLMGLMQRF 285
+ M G P+ T+ ++ L+ +A N ++ L R
Sbjct: 537 DKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRS 596
Query: 286 G----------------IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM-PNRKI 328
G PD TY +I G CR G + A + + + L+ PN +
Sbjct: 597 GNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAM 656
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y +++ L +EG A M +D + + P + LL+ + + K N I++ ++
Sbjct: 657 YTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMR 716
Query: 389 RR 390
R
Sbjct: 717 SR 718
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 27/298 (9%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N+ + ++ ++ +F + +LE + G R G I M+ G K G+++ A+
Sbjct: 353 NEVTYGALLNGISKHAQFGLVSSVLERMRM--DGVRVGHISYTTMIDGLCKNGLLEEAVQ 410
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME--VPEK-FHIQFDIFSFNIVI 193
DM K +V VL + FL VP + H + +I
Sbjct: 411 LLDDM----LKVSVSPDIVTFSVL--------VNGFLKTGLVPNRVLH--------STLI 450
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+C+MG L +A M + G D T + L+++F + R E + M G
Sbjct: 451 YNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLA 510
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ TF+ I N + +A + M G P + TY ++KG GH++ AK
Sbjct: 511 PSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIF 570
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y TM+ + G+ + A + + + N+VP T ++L+ GL
Sbjct: 571 MHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGL 628
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C N A F++ I+ + + A + LM G P T N+V+ + +D+
Sbjct: 105 CNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFW 164
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ M+ R+ PN + +++ LC+ G F A ++ + + P+ T + LL
Sbjct: 165 SFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLL 221
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 154/319 (48%), Gaps = 13/319 (4%)
Query: 76 VIENKYAFEDTVSRLAGARRFDY---IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
++ N + ++ L RF I H +E SL + I++ + L G I+
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL---GGDIE 425
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
AM F M G TV + N + LT+ A A L+++ ++ + D +++N
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA--ARLLDLMKENGCEPDEWTYNE 483
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ F + G L+ A EM + G+ P+ ++YT LI KD + +I L M G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C PN+ ++N I L + R +A K+ M G+ P+ +TY +I G CR+G A
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K++ M R+ +PN Y ++I+ LCQEG + A M + + P++DT S L+ GL
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCE----PTLDTYSTLVSGL 659
Query: 372 KKNNQPCKANTIMALVQRR 390
+ + +A ++ ++ R
Sbjct: 660 CRKGRFYEAEQLVKDMKER 678
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ K M++ A + + M G + ++ + N + +L++ ++ + L ++ + +
Sbjct: 169 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ-Y 227
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+F++ +I C LD A+ V M K G P+ +TY+TLI+ + R +
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M+ KG P + T+ + I L +A +L+ M++ G P+ TY +I G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
R G L++A +Y ML L+PN Y +I+ LC G F+ A
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 3/241 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F M GC + + + L + L E+ EK I+ ++++ + I
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPI 310
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
A C + ++A ++ M+K G +P+V TYT LIS + + E+ GL++ M+ +G
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN T+N I L R A K+ M+ G + TYN +IKG C G ++ A +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLK 372
+ ML +P Y T+I+ +G+ N A + D MK+N P T + L+ G
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL-DLMKENGCEPDEWTYNELVSGFS 489
Query: 373 K 373
K
Sbjct: 490 K 490
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF---DYIEHLLEHQKSLPQGRR 114
+D E + Q F + N F ++RL R F D+I L+ + R
Sbjct: 86 KDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILM-----IKACRN 140
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
E I R+ A + + LY C + L A +++ +R+L
Sbjct: 141 EEEIRRV------ADFLNEISGMGFGFSLYSCNTLLIQL-AKFEMVEGARNLYKQML--- 190
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
IQ + +FN +I + G + +A L++ ++ + + PDV TYT+LI ++
Sbjct: 191 ----NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ G+++ MV +GC PN T++ I L N+ R +A ++ M GIEP TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
L I C H + A ++ + M R PN + Y +I L + G +A + +K
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 355 KNWVPSVDTISALLEGL 371
+ VP+ T +AL+ L
Sbjct: 367 EGLVPNTVTYNALINEL 383
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I C G +D+A ++ EM + G++P V TYT I+A E L M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+GC PN+ T+ I L + A L M + G+ P+ VTYN +I C G
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K++ M G + N + Y +I LC GD A ++ + +K +P+V T + L
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Query: 368 LEG-LKKNN 375
+ G L K N
Sbjct: 450 INGYLTKGN 458
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A+ M GC V+S NA + L++ + ++ E+ +
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP- 581
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I C G A+ + +M+K P++ TY++LI ++ + + +
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMS 641
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD-EVTYNLVIKGFCR 303
+ GC P L T++ + L K R ++A +L+ M+ G PD E+ Y+L+I C+
Sbjct: 642 EI----GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI-AHCK 696
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ +D A K++ ++ + + IY+ +I LC+ G A + + ++K W
Sbjct: 697 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 756
Query: 364 ISALLEGLKKNNQ 376
+ L++GL K +
Sbjct: 757 WTVLVDGLLKEGE 769
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA-IQAFLMEVPEKFHIQ 183
+ K G ++ A +FY + C ++ + S+D K I L++ E+
Sbjct: 488 FSKWGKLESA--SFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ S+N VI + +A + +M + G+ P+VITYTTLI ++ R + +
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M + C PNL T++ I L + ++ +A + M G EP TY+ ++ G CR
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCR 661
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G A+++ M R P+R+IY +++ C+
Sbjct: 662 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 696
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
E+ +G + + TL+ K E L+ M+ G P+L TFN I L K
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A ++ + ++ + PD TY +I G CR+ +LD+A V+ M+ PN Y
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
T+I+ LC EG + A M ++ ++K P+V T + + L +A ++A +++R
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 391 VPHFSSNQLSAFKSILSK 408
+ +A S LS+
Sbjct: 333 GCRPNVQTYTALISGLSR 350
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 109/253 (43%), Gaps = 9/253 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N ++ ++ L+ RF E + + K + QG I ++ G + G + A
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICD--KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F+DM C + + ++ + L + + KA +A E + + + +++ ++
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQ--EGKADEA---ERMSEIGCEPTLDTYSTLVSGL 659
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +A ++ +M++ G PD Y +L+ A K+ + +++ + KG +L
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+ + I L + +A L M DE+ + +++ G + G LD+ K+
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779
Query: 317 MLGRRLMPNRKIY 329
M + PN + Y
Sbjct: 780 MESKNFTPNIQTY 792
>gi|194707518|gb|ACF87843.1| unknown [Zea mays]
gi|219888485|gb|ACL54617.1| unknown [Zea mays]
Length = 196
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 104/181 (57%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M K G+KP+ IT+TT ++ FYK+ + + + LM GC +L +NVR+Q L R
Sbjct: 1 MCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGR 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
S +A L+ M + G +P+ VTYN +I GFC+ G L+ AK++Y M + L+ + Y
Sbjct: 61 SGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFM 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
+I+YLC+ D + A + + KNWVP T+ L+ GL +++ +A I+ ++ +
Sbjct: 121 LIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKMKEKF 180
Query: 392 P 392
P
Sbjct: 181 P 181
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 9/293 (3%)
Query: 87 VSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
+ LA F HLL+ ++S+P + I+ I+ Y +AGM A + F M Y
Sbjct: 146 IDLLAKHHHFPLARHLLDEMRERSIPVSSQ--VILAIIRRYVRAGMSPEASELFRRMEEY 203
Query: 145 GCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
G ++ A+L L++ R QA F D+ + ++ A+C G LD
Sbjct: 204 GAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSVF--PPDVVLYTTLVHAWCRAGCLD 261
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA V EMQ+ G+ P+V TYT++I A Y+ + L M+ GC PN ATFN +
Sbjct: 262 KAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIM 321
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH--LDMAKKVYSAMLGRR 321
+ V RS Q ++ M++ G +PD +TYN +++ C G LD A KV + M+ +
Sbjct: 322 RAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKG 381
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+P+ + M+ + G+ A + + + P+V T + L++ K
Sbjct: 382 CIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKE 434
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG + A F +M G V + + + + + + Q L ++ E
Sbjct: 254 WCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMET-GCPP 312
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +++A + G ++ V +M++LG PD+ITY L+ + + +
Sbjct: 313 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMK 372
Query: 245 NL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M+ KGC P+ TFN ++ ++ A +L MQ +P+ VTYNL++K F
Sbjct: 373 VLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFN 432
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSV 361
+ +DM ++ M + + PN Y +I C G++ A+ ++ + +K+ P+
Sbjct: 433 KEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTK 492
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
+L L+K Q K ++ L+ R
Sbjct: 493 PVYDMVLMLLRKAGQLRKHEELVELMADR 521
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIE 100
K + P ++KL +AE+D EK +F + + + ++ +F V RL A +F E
Sbjct: 12 KNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAE 71
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
L+ K E ++ I YG+ ++ F+ M + C + K+ L +L
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM-GILDKAYLVMVEMQKLGVKP 219
E L F + E + + S N++IKA C G +D + +EM K G P
Sbjct: 132 VEENQLNLAFKFYKNMRE-IGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D TY TLIS + R + L+ MV K C P + T+ I L + +A + +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M+ GIEP+ TY+ ++ G C+ G A +++ M+ R PN Y T+I LC+E
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M+ P Y T+++ ++N+ + + M G P +A+ NV I+ L
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 271 RSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A K+ M + G +PD TY +I G CR G +D AKK+++ M+ + P Y
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++I+ LC + + A ++ K P+V T S+L++GL K+ + +A + ++
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 390 R 390
R
Sbjct: 291 R 291
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 105/190 (55%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + +I + C+ G++DK + +EM+ G+ PDV+ Y+++I R E
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+N MV +G PN+ TFNV I L + +AN L+ LM + G PD TYN +I GF
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G +D A+ ++ +M + + + Y +I+ C+ G A + ++ M K +P+V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 362 DTISALLEGL 371
T + LL GL
Sbjct: 414 ITYNTLLTGL 423
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 9/253 (3%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF--- 184
G + A F +M G V + N + L ++ ++ L K IQ
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLL-----KLMIQRGES 340
Query: 185 -DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D F++N +I FC G +D A + V M+ G++ D ++Y LI+ + K R L
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+CK P + T+N + L + + A L G M+ + P+ TYN+++ G C+
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ HL A +++ + P+ +I+ +I LC+ +A + + P+V T
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 364 ISALLEGLKKNNQ 376
+ ++ GL K+ Q
Sbjct: 521 YTVMIHGLCKSGQ 533
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + NI+I +C + +D V+ EM + G P+ +T+T+L+ +R GL
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM----QRFG--IEPDEVTYNLVI 298
MV G PN+ T+ + L + A KL M FG I+P+ V Y +I
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ G +D K+++ M GR + P+ Y ++IH +C G + A + + + +
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T + L++ L K + +AN ++ L+ +R
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQR 337
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 110/231 (47%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D S+N++I +C+ G + +A + EM + P VITY TL++ +++ +
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L+ M P T+N+ + L +A +L ++ +P +N +
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C++ +++A+++++ + L PN Y MIH LC+ G A + +K
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
P++ T + L+ G +N++ K ++ + + ++ +S +LSK
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A D F M G + S N + +S + + E+ K I + +
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK-EIMPTVIT 415
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N ++ G + A+ + EM+ + P+ TY L+ K+N L++ +
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P++ FN I L R+ A +L + G+EP+ +TY ++I G C+SG L+
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AK ++ M + PN + T++ CQ + + ++ +K++ P TIS ++
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595
Query: 369 EGLKKNNQ 376
+ L K+ +
Sbjct: 596 DLLSKDEK 603
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQK----LGVKPDVITYTTLISAFYKDNRPEIGN 241
I SFN ++ A ++ K Y ++ + K +G+ PD IT LI+ + N+ + G
Sbjct: 92 ISSFNTLLGAVAKI----KRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGL 147
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ M+ +G PN TF ++ L R +A L+ M R G P+ VTY ++ G
Sbjct: 148 AVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGL 207
Query: 302 CRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
C +G+ +A K++ ML G + PN Y T+I LC++G + + + +
Sbjct: 208 CMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267
Query: 356 NWVPSVDTISALLEGL 371
P V S+++ G+
Sbjct: 268 GISPDVVAYSSIIHGM 283
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P +++FN + + +R + L M G+ PD +T N++I +C +D V
Sbjct: 90 PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
ML R PN + +++ LC + A + + ++ + P+V T LL GL
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGL 207
>gi|255561325|ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 4/326 (1%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-REG 116
+DP +F ++ + + N+ + +++LA A+ FD IE +++ K R G
Sbjct: 8 KDPNSVFSVWDQYTNRKDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEKSCRLSNG 67
Query: 117 FIMRIMMLYGK-AGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
F ++ +YG AG IK A+DT +DM Y C VK+ N L +L +R +
Sbjct: 68 FFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFDVVHEIYE 127
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+ P ++ D NI+IK CE G L+ A+ V+ E K KP+V T++TL+
Sbjct: 128 KAP-ILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAK 186
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
GL + M +G + TFN+ I L + R + +L+ M+ G EP+ +Y
Sbjct: 187 GEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCEPNAGSY 246
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
V+ G +G AK M+ P+ Y+ +I LC+E + K +K
Sbjct: 247 QEVLYGLLDAGKFSEAKDFMDRMVCEGNGPSFVSYKKLIDGLCKEKLIGEVDCVLKQMLK 306
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKA 380
+ +VP + ++ + + C +
Sbjct: 307 QGFVPKMGMWKHIVGSMLSESGDCTS 332
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 120/225 (53%), Gaps = 1/225 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++NI+I C+ G + KA + M + GV+ V+TYT LI A K + + + L+
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ V +G P+L +N I +A ++MG M++ I PD+VTYN +++G C
Sbjct: 346 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A+K+ M R + P+ Y T+I +GD A + + M K + P++ T
Sbjct: 406 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 465
Query: 365 SALLEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSILSK 408
+AL++GL KN Q A N + +V+ + S +S + + ++
Sbjct: 466 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ F +M G + TV + A + L++ ++ E + I+ D+
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR-GIRPDL 357
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I + G +D+A+ +M EM+K + PD +TY TL+ R + L +
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+L T+N I K A ++ M G P +TYN +I+G C++G
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
D A+ + M+ + P+ Y ++I L E
Sbjct: 478 GDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITY 224
++A + E+ E+ I + +++ VI +C++G +D+A V EM G VKP+ + Y
Sbjct: 161 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 220
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI + + + + MV +G +AT+N+ + L R +A +L+ M
Sbjct: 221 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 280
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD TYN++I G C+ G++ A +++ M R + Y +I+ L ++G
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 340
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++++ P + +AL+ + +A IM ++++
Sbjct: 341 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
TFN+ ++HL + + +A +L+ M R P+ VTYN VI GFC G + A + M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 318 LGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
R + PN+ Y T+I C+ G + A + + + K V P +AL+ G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 226
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%), Gaps = 2/322 (0%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
P + +K +DP + LF+ N H + + ++ + +LA +RRF+ +E +L H ++
Sbjct: 51 PFVTDVKEVKDPCEALALFE-NYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRN 109
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
E + ++ YGKA +++ ++ F+ M + C RT++S N L L +
Sbjct: 110 RNIRCNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSK 169
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ E + + S+NI+IK + + G ++A + EM + GV+P V+TY + +
Sbjct: 170 ASEIFQQAYE-MGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXL 228
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ + L+ M KG PN T+ + ++ + +A KLM M+ G +
Sbjct: 229 GVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK 288
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
V Y +++ ++G++D + + + M RRL P+ Y +++YLC+EG AY +
Sbjct: 289 LRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKV 348
Query: 349 CKDSMKKNWVPSVDTISALLEG 370
P+ T +++G
Sbjct: 349 LVKMQVGGCDPNAATYRMMIDG 370
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 153/312 (49%), Gaps = 21/312 (6%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------L 124
F T L AR +D H+L+ + SL G+ F+ +M +
Sbjct: 75 FCITTHILVRARMYDPARHILK-ELSLMSGKSS-FVFGALMATYRLCNSNPSVFDILIRV 132
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + GMI+ +++ F M LYG +V + NA L + +S + ++ +FL E+ ++ I
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKR-KICP 191
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +FNI+I C G K+ +M +M+K G P ++TY T++ + K R + L
Sbjct: 192 DVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG ++ T+N+ I L RS + L+ M++ I P+EVTYN ++ GF
Sbjct: 252 DHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNE 311
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +A+++ + ML L PN + +I EG+F A M K + + +
Sbjct: 312 GKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSY 371
Query: 365 SALLEGLKKNNQ 376
LL+GL KN +
Sbjct: 372 GVLLDGLCKNAE 383
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D+ ++N++I C K YL++ +M+K + P+ +TY TL++ F + + I
Sbjct: 259 VNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIAR 318
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N M+ G PN TFN I +++ +A K+ +M+ G+ EV+Y +++ G
Sbjct: 319 QLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGL 378
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ D+A+ Y M + R Y MI LC+ G + A +M + K P +
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDI 438
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T SAL+ G + + A I+ + R
Sbjct: 439 VTYSALINGFCRVGRLKTAKEIVCRIYR 466
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN+++ + C+ G + +A M M G+ P+ +++ LI+ + ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P T+ ++ L A K + +Q D V N +I C+S
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS 626
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-MKKNWVPSVDT 363
G+LD A ++ M+ R ++P+ Y ++I LC++G +A + K++ + N VP+
Sbjct: 627 GNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVM 686
Query: 364 ISALLEGLKKNNQ 376
+ ++G+ K Q
Sbjct: 687 YTCFVDGMFKAGQ 699
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 10/268 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K A+ F+ M G T S L L ++ + + F M + ++ + +
Sbjct: 347 GNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRIT 405
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C+ G LD+A +++ EM K G+ PD++TY+ LI+ F + R + + V
Sbjct: 406 YTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEI----V 461
Query: 249 CK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
C+ G PN ++ I + + ++ M G PD T+N+++ C++
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ M ++PN + +I+ G+ A+ + + K P+ T
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVP 392
+LL+GL K A + +Q VP
Sbjct: 582 GSLLKGLCKGGHLIAAEKFLKSLQ-NVP 608
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN +I G +A + M+ G+ ++Y L+ K+ ++ G + M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G T+ I L +A ++ M + GI+PD VTY+ +I GFCR G L
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
AK++ + L PN IY T+I+ C+ G
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 121/273 (44%), Gaps = 5/273 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG K M G R V + NA + + ++ L E+ + ++
Sbjct: 696 KAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGP-NL 754
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI++ + + + ++++ M G+ PD +T ++I + N EIG +
Sbjct: 755 TTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKA 814
Query: 247 MVCKGCFPNLATFNVRIQHL-VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+C+G + TFN+ I N +W A ++ +M GI D+ T + ++ R+
Sbjct: 815 FICRGVEVDRHTFNMLISKCCANGEINW-AFDMVNVMTSLGISLDKNTCDAIVSVLNRNH 873
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ V M + + P + Y +++ LC+ GD A+++ ++ + P S
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 933
Query: 366 ALLEGLKKNNQPCKANTIM--ALVQRRVPHFSS 396
A++ L K + +A+ ++ L + VP +S
Sbjct: 934 AMVRALAKCGKADEASLLLRSMLKMKLVPTIAS 966
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A D M G + +A + VL + + + L E+ ++ I +
Sbjct: 838 GEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQ-GISPESRK 896
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ C +G + A++V EM + P + + ++ A K + + + L M+
Sbjct: 897 YIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSML 956
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P +A+F + +A +L +M G++ D V+YN++I G C G +
Sbjct: 957 KMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIMCKDSMKKNWVPSV 361
+A +++ M + N Y+ ++ + +G +F+ I+ KD + + ++ ++
Sbjct: 1017 IAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFITAM 1070
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 42/242 (17%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
LK ++AF+ ++ D +FN++I C G ++ A+ ++ M LG+ D T
Sbjct: 809 LKILKAFICR-----GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCD 863
Query: 226 TLISAFYKDNR-----------------PE----IG--NGLW-------------NLMVC 249
++S +++R PE IG NGL ++
Sbjct: 864 AIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAH 923
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K C PN+A + ++ L ++ +A+ L+ M + + P ++ ++ FC++G++
Sbjct: 924 KICPPNVAE-SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTE 982
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A ++ M L + Y +I LC +GD +A+ + ++ + ++ +V T AL+
Sbjct: 983 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVG 1042
Query: 370 GL 371
G+
Sbjct: 1043 GI 1044
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 71/170 (41%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ LI + ++ + ++ LM G P++ T N + +V + M
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ I PD T+N++I C G + + M P Y T++H+ C++G F
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
A + K V T + L+ L ++N+ K ++ +++R+ H
Sbjct: 246 AAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIH 295
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL-----TESRDLKAIQAFLMEVPEKFH 181
+ G + A+ + + +G TV S NA L L + RD + ++
Sbjct: 144 RLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRN-G 202
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ +++++N++I+ G L+K M +M+K G+ P+V+TY TLI A K + +
Sbjct: 203 VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAM 262
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M G NL ++N I L K R + +L+ M+ G+ PDEVTYN ++ GF
Sbjct: 263 ALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGF 322
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G+L + S M+G+ L PN Y T+I+ +C+ G+ + A + + P+
Sbjct: 323 CKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNE 382
Query: 362 DTISALLEGL 371
T + L++G
Sbjct: 383 RTYTTLIDGF 392
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K AM M + G + S N+ + L + + + E+ K + D ++N
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP-DEVTYN 316
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ FC+ G L + +++ EM G+ P+V+TYTTLI+ K +++ M +
Sbjct: 317 TLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVR 376
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN T+ I K +A K++ M G P VTYN ++ G+C G + A
Sbjct: 377 GLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEA 436
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M+ R L P+ Y T+I C+E + A+ M ++ ++K +P T S+L++G
Sbjct: 437 VGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQG 496
Query: 371 L 371
L
Sbjct: 497 L 497
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I FC+ G++++AY V+ EM G P V+TY L+ + R + G+ M
Sbjct: 384 TYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +G P++ +++ I +R +A ++ M G+ PD VTY+ +I+G C L
Sbjct: 444 VERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKL 503
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ M+ R L P+ Y ++I+ C +G+ + A + + +++ ++P T S L
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563
Query: 368 LEGLKK 373
+ GL K
Sbjct: 564 INGLNK 569
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 31/263 (11%)
Query: 127 KAGMIKHAMDTFYDMHLYGCK---RTVKSL----------NAALKVLTESRDLKAIQAFL 173
KAG + A++ F M + G + RT +L N A KVL+E + F
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSE----MIVSGF- 413
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ ++N ++ +C +G + +A ++ M + G+ PDV++Y+T+I+ F +
Sbjct: 414 ---------SPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464
Query: 234 DNRPEIGNG--LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ E+G + MV KG P+ T++ IQ L +++ +A L M R G+ PDE
Sbjct: 465 ER--ELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDE 522
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
VTY +I +C G L A +++ M+ R +P+ Y +I+ L ++ +A +
Sbjct: 523 VTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLK 582
Query: 352 SMKKNWVPSVDTISALLEGLKKN 374
+ VP T + L+E N
Sbjct: 583 LFYEESVPDDVTYNTLIENCSNN 605
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM--EVPEKFHIQFDI 186
G ++ A+ M G V S + + R+L +AF M E+ EK + D
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG--KAFQMKEEMVEK-GVLPDT 487
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I+ C L +A+ + EM + G+ PD +TYT+LI+A+ D L +
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVI------ 298
MV +G P+ T++V I L K R+ A +L L++ F E PD+VTYN +I
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRL--LLKLFYEESVPDDVTYNTLIENCSNN 605
Query: 299 ---------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
KGFC G ++ A +V+ ML R PN IY MIH + G+ + AY +
Sbjct: 606 EFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLY 665
Query: 350 KDSMKKNWVPSVDTISALLEGLKK 373
+ ++ + AL++ L +
Sbjct: 666 MELEHSSFACHTVAVIALVKALAR 689
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 186 IFSFNIVIKAFCEMGI-----LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ S+N V+ A D A V +M + GV P+V TY +I E G
Sbjct: 167 VLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKG 226
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
G M +G PN+ T+N I K++ +A L+ M G+ + ++YN VI G
Sbjct: 227 LGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVING 286
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C G + ++ M G+ L+P+ Y T+++ C+EG+ + ++ + + K P+
Sbjct: 287 LCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPN 346
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQ 388
V T + L+ N CKA + V+
Sbjct: 347 VVTYTTLI------NCMCKAGNLSRAVE 368
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 97/196 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I C+ G L +A + +M+ G++P+ TYTTLI F + +
Sbjct: 346 NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P++ T+N + R +A ++ M G+ PD V+Y+ VI GFCR
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M+ + ++P+ Y ++I LC + A+ + ++ M++ P T
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525
Query: 365 SALLEGLKKNNQPCKA 380
++L+ + + KA
Sbjct: 526 TSLINAYCVDGELSKA 541
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 168/374 (44%), Gaps = 48/374 (12%)
Query: 46 LEPP---ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
L PP A+++ +A D + F+ F+ F++ +S L+ R D +
Sbjct: 90 LSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRV 149
Query: 103 LEHQKSLPQGRREGF--IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
+ + + +G R G ++M+ Y +AG ++ AM + M GC + N A+ VL
Sbjct: 150 V--RLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVL 207
Query: 161 T-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC-EMGILDKAYLVMVEMQKLGVK 218
R KA++ E + ++ D++++N +IK C ++D ++ V +Q G
Sbjct: 208 VVAGRVDKALE--FAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQN-GCP 264
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLV---------- 267
PD I+Y T++S K+ R E GL M G FP+ T+NV I L
Sbjct: 265 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALE 324
Query: 268 ------NKR-------------------RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
KR R +A +++G M G +PD VTY+ V+ GFC
Sbjct: 325 FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFC 384
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G LD A+K+ M PN + +++ LC+ G + A+ + S ++ W PS
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDI 444
Query: 363 TISALLEGLKKNNQ 376
T S ++ G ++ +
Sbjct: 445 TYSVVMHGFRREGK 458
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ M GC S + L + + ++ ++ L + + D ++N++I
Sbjct: 251 AMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLI 310
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ G D+A + E + + D + Y+ ++ +F + R + M+ KGC
Sbjct: 311 HGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQ 370
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ T++ + QA K+M M + +P+ VT+ ++ G C+ G A ++
Sbjct: 371 PDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWEL 430
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ P+ Y ++H +EG + + ++K + P+ I+ L+ L K
Sbjct: 431 LNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCK 490
Query: 374 NNQPCKANTIMALVQRR 390
+ +P +A M Q +
Sbjct: 491 DRKPAEAKDFMEQCQSK 507
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 81/228 (35%), Gaps = 70/228 (30%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ +++ V+ FC +G LD+A +M M K KP+ +T+T L++ K +
Sbjct: 370 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 429
Query: 243 LWN-----------------------------------LMVCKGCFPNLATFNVRIQHLV 267
L N M+ KG FP N+ I L
Sbjct: 430 LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALC 489
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL--------DM---------- 309
R+ +A M Q G + V + VI GF R G L DM
Sbjct: 490 KDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVV 549
Query: 310 -----------------AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A + ML R ++P Y+T+IH C++G
Sbjct: 550 TYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKG 597
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 119/219 (54%), Gaps = 1/219 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G K + + N + + L ++ ++ I ++
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNV 333
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+++I +F + G L +A ++ EM + G+ P+ ITY +LI F K+NR E + +L
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KGC P++ TFN+ I R +L M G+ + VTYN +++GFC+SG
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
L++AKK++ M+ RR+ P+ Y+ ++ LC G+ A
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 108/205 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I FC G D ++ +M K + P+V+T++ LI +F K+ + + L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G PN T+N I + R +A +++ LM G +PD +T+N++I G+C++
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D +++ M R ++ N Y T++ CQ G +A + ++ + + P + +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +++
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEK 501
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 1/238 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+D F DM TV N + +++ + + A ++ K I I++ +I+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK-GIAHSIYTLSIM 129
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I FC L A+ M ++ KLG +PD + + TL++ + R L + MV G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P L T N + L + A L+ M G +P+EVTY V+ C+SG +A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M R + + Y +I LC++G + A+ + + K + + T + L+ G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I FC+ L++A ++ M G PD++T+ LI+ + K NR + G L+
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N T+N +Q + A KL M + PD V+Y +++ G C +G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
L+ A +++ + ++ + IY +IH +C + A+
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 21/242 (8%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +FNI+I +C+ +D + EM GV + +TY TL+ F + + E+ L+
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + P++ ++ + + L + +A ++ G +++ +E D Y ++I G C +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP----- 359
+D A ++ ++ + + + + Y MI LC++ + A I+ + ++ P
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 360 -----------SVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLS-AFKSILS 407
T + L+E +K + P +T+ ++ SS +L +F +LS
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN----MLSSGELDKSFLDMLS 637
Query: 408 KS 409
+
Sbjct: 638 TT 639
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ V+ C+ G A ++ +M++ +K D + Y+ +I KD + L+N M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG ++ T+N I N R KL+ M + I P+ VT++++I F + G L
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ M+ R + PN Y ++I C+E A M + K P + T + L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 368 LEGLKKNNQPCKANTI 383
+ G CKAN I
Sbjct: 410 INGY------CKANRI 419
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N ++ C G + A +++ M + G +P+ +TY +++ K + + L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M + + +++ I L A L M+ G + D +TYN +I GFC +G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D K+ M+ R++ PN + +I +EG A + K+ M++ P+ T +
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 366 ALLEGLKKNNQ 376
+L++G K N+
Sbjct: 373 SLIDGFCKENR 383
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VI + L SA K + E+ L M KG ++ T ++ I R+ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MG + + G EPD V +N ++ G C + A ++ M+ P T+++ LC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G + A ++ ++ + P+ T +L + K+ Q A ++ ++ R
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G ++ A F +M + + S L L ++ +L KA++ F EK ++
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF--GKIEKSKME 505
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI + I+I C +D A+ + + GVK D Y +IS + + + L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M +G P+ T+N+ I+ + + A +L+ M+ G D T +VI
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN-MLS 624
Query: 304 SGHLD 308
SG LD
Sbjct: 625 SGELD 629
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 38/314 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G+I HA+ +M GC + + N + L + ++ + + K ++ D+
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP-DV 359
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+FN +I +C+ LD A ++ M G+ PD ITY ++++ K + + N +
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KGC PN T+N+ I++ + +A+ ++ M + G+ PD +++N +I GFCR+G
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479
Query: 307 LD-----------------------------------MAKKVYSAMLGRRLMPNRKIYQT 331
LD MA+K++ M+ + P+ Y+
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR- 390
++ C+ + + AY+ + + K +VPS+ T +L L N++ +A I+ ++ R
Sbjct: 540 LVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599
Query: 391 -VPHFSSNQLSAFK 403
VP LS K
Sbjct: 600 VVPEVVDTILSTDK 613
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A++ F + K + N+ +K L + L A+Q V + H DI+
Sbjct: 268 GDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHP--DIW 325
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NIVI C+MG + A +VM + G PDV T+ T+I + K + + L M
Sbjct: 326 TYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERM 385
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P+ T+N + L ++ + N+ M G P+ +TYN++I+ FC+ L
Sbjct: 386 WMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQL 445
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A V M L+P+ + T+IH C+ GD + AY++ + +K + + DT + L
Sbjct: 446 EEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNIL 505
Query: 368 L 368
+
Sbjct: 506 I 506
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 40/293 (13%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N L L + D+ A L +V ++ + + F+ NI I+ CE G L++A + +
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKR-GMSVNKFTCNIWIRGLCEGGRLEEA-VAL 172
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
VE + PDV+TY TL+ KD++ + M+ +GC P+ T+N I +
Sbjct: 173 VESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232
Query: 270 RRSWQANKLM--------------------GLMQRFGIE---------------PDEVTY 294
+A +L+ GL +E PD V Y
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N ++KG CR G + A +V + M+ P+ Y +I+ LC+ G+ + A ++ D++
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
K ++P V T + +++G K K ++ + LV+R + + + S+L+
Sbjct: 353 KGYLPDVFTFNTMIDGYCKR---LKLDSALQLVERMWMYGIAPDAITYNSVLN 402
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N +I +C+ +L +A ++ + G PD +TY +LI+ + E L+
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N K P+L +N ++ L + A ++M M G PD TYN+VI G C+
Sbjct: 278 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKM 337
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A V + + + +P+ + TMI C+ + A + + P T
Sbjct: 338 GNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITY 397
Query: 365 SALLEGLKKNNQPCKAN 381
+++L GL K + + N
Sbjct: 398 NSVLNGLCKAGKAKEVN 414
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G +++A + E Q +KPD++ Y +L+ + +
Sbjct: 253 DRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVM 312
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV GC P++ T+N+ I L A +M G PD T+N +I G+C+
Sbjct: 313 NEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKR 372
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A ++ M + P+ Y ++++ LC+ G ++ + K P+ T
Sbjct: 373 LKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 432
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L+E K NQ +A+ ++
Sbjct: 433 NILIENFCKINQLEEASGVI 452
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ A D+A+ V V M GV PD T+T I +F RP + L +
Sbjct: 12 AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+GC + ++ L + A L M R + PD T+N V+ C+ G +
Sbjct: 72 PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ + + +L R + N+ I LC+ G A + +SM P V T + L
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPDVVTYNTL 190
Query: 368 LEGLKKNNQ 376
+ GL K+++
Sbjct: 191 MRGLCKDSK 199
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%), Gaps = 8/256 (3%)
Query: 141 MHLYGCKRTVKSLNAALKVL--TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M L+GC + NA + L T D +A + ++ + + D + + IK+FC
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHD-QAHKVYVRMLSAG--VAPDARTHTVRIKSFCI 57
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G A ++ + + G + Y T++ Y L++ M+ + FP++AT
Sbjct: 58 TGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN + L K ++ L+ + + G+ ++ T N+ I+G C G L+ A + +M
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM- 176
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
+ P+ Y T++ LC++ A + M + +P T + +++G K +
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236
Query: 379 KANTIM--ALVQRRVP 392
+A ++ A+ + VP
Sbjct: 237 EATELLKDAIFKGFVP 252
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 4/290 (1%)
Query: 54 LKAERDPEKLFQLFKA--NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+KAE+D K +F + ++ + F + RL +F E +LE K
Sbjct: 22 IKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDC 81
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
E + I YG+ A+ F+ M + K T KS +L E +K
Sbjct: 82 EVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIG 141
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
F E+ EK I + S NI+IKA C+ ++ A+ + EM G +PD TY TLI+
Sbjct: 142 FYKEMREK-GIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLING 200
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K + L + M KG P++ ++ I L +A +L+ M GIEP+
Sbjct: 201 LCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPN 260
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
TY+ ++ G C+SGH A ++ M+ RRL+PN Y T+I+ LC+EG
Sbjct: 261 VFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEG 310
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V +M+ VKP +Y T+ ++N + G + M KG P + + N+ I+
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163
Query: 265 HLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L N+ A +L M G +PD TY +I G C+ G + AK++ M + L
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y ++IH LCQ + + A + ++ + P+V T S+L++GL K+ +A +
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283
Query: 384 MALVQRR 390
+ ++ RR
Sbjct: 284 LEVMVRR 290
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 113/283 (39%), Gaps = 43/283 (15%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A F +M GC+ + + L + + + L E+ EK + + S+
Sbjct: 172 VESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEK-GLSPSVVSYT 230
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C+ LD+A ++ EM G++P+V TY++L+ K L +MV +
Sbjct: 231 SLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRR 290
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------------- 294
PN+ T++ I L + + +A +++ M+ G++PD Y
Sbjct: 291 RLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEA 350
Query: 295 --------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
N+V++G C + A ++Y +M R +
Sbjct: 351 ANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGT 410
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ ++ C+ GD N A + ++ + +P + L+ GL
Sbjct: 411 FDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL 453
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 8/167 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV------PEKF 180
K G + A++ M L G K + L + + + F+ E+ P +
Sbjct: 308 KEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRA 367
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
F + N+V++ C +A+ + + M+ G+ ++ T+ L+ F K
Sbjct: 368 SWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKA 427
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM--GLMQRF 285
+ M+ GC P+ +NV + L ++++ + +L+ L Q+F
Sbjct: 428 ARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKF 474
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 129/295 (43%), Gaps = 4/295 (1%)
Query: 54 LKAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+KAERD +K +F + + + F +SRL A F E LL K
Sbjct: 22 IKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKC 81
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
E + I YG+ A+ F M Y C+ + KS +L LK
Sbjct: 82 NITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALR 141
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
F + E I + S N++IKA C+ G +D A + EM G PD TY TLI+
Sbjct: 142 FYRYMRE-MGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLING 200
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ + L+ M K C P + T+ I L + A +L+ M GI+P+
Sbjct: 201 LCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPN 260
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
TY+ ++ G C+SG A ++ M+ RR +PN Y T++H LC+EG A
Sbjct: 261 VFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 121/249 (48%), Gaps = 9/249 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A + F +M C TV + + + L +S+DL + L E+ K I+ ++
Sbjct: 203 RLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK-GIKPNV 261
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ ++ C+ G +A ++ M P++ITY+TL+ K+ + + + +
Sbjct: 262 FTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDR 321
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY-------NLVIK 299
M +G P+ + I + + +A + M GI P+ +T+ N+V++
Sbjct: 322 MKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQ 381
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C + H + A ++Y +M R + + K + ++++Y C +GD + A + + + +P
Sbjct: 382 GLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIP 440
Query: 360 SVDTISALL 368
T +A++
Sbjct: 441 DEVTWNAVV 449
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
EK +I DIF + +A+ + A V +M++ +P +Y T+ + +N+
Sbjct: 79 EKCNITEDIFLS--ICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN-KLMGLMQRFGIEPDEVTYNL 296
++ + M G P++A+ NV I+ L + A ++ M G PD TY
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGT 196
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I G CR G + AK+++ M + P Y ++IH LCQ D + A + ++ K
Sbjct: 197 LINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRR 390
P+V T S+L++G K+ +A ++ +V RR
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I L +G + A+ F +M GC + + L + + E+ K
Sbjct: 162 IKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK- 220
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ +I C+ LD A ++ EM G+KP+V TY++L+ K
Sbjct: 221 ACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRA 280
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L ++MV + PN+ T++ + L + + +A +++ M+ G+ PD Y +I G
Sbjct: 281 LELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISG 340
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNR-------KIYQTMIHYLCQE 339
FC A M+ + PNR +I+ ++ LC E
Sbjct: 341 FCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE 386
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 168/374 (44%), Gaps = 48/374 (12%)
Query: 46 LEPP---ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
L PP A+++ +A D + F+ F+ F++ +S L+ R D +
Sbjct: 90 LSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRV 149
Query: 103 LEHQKSLPQGRREGF--IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
+ + + +G R G ++M+ Y +AG ++ AM + M GC + N A+ VL
Sbjct: 150 V--RLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVL 207
Query: 161 T-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC-EMGILDKAYLVMVEMQKLGVK 218
R KA++ E + ++ D++++N +IK C ++D ++ V +Q G
Sbjct: 208 VVAGRVDKALE--FAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQN-GCP 264
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLV---------- 267
PD I+Y T++S K+ R E GL M G FP+ T+NV I L
Sbjct: 265 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALE 324
Query: 268 ------NKR-------------------RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
KR R +A +++G M G +PD VTY+ V+ GFC
Sbjct: 325 FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFC 384
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G LD A+K+ M PN + +++ LC+ G + A+ + S ++ W PS
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDI 444
Query: 363 TISALLEGLKKNNQ 376
T S ++ G ++ +
Sbjct: 445 TYSVVMHGFRREGK 458
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ M GC S + L + + ++ ++ L + + D ++N++I
Sbjct: 251 AMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLI 310
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ G D+A + E + + D + Y+ ++ +F + R + M+ KGC
Sbjct: 311 HGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQ 370
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ T++ + QA K+M M + +P+ VT+ ++ G C+ G A ++
Sbjct: 371 PDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWEL 430
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ P+ Y ++H +EG + + ++K + P+ I+ L+ L K
Sbjct: 431 LNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCK 490
Query: 374 NNQPCKANTIMALVQRR 390
+ +P +A M Q +
Sbjct: 491 DRKPAEAKDFMEQCQSK 507
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 81/228 (35%), Gaps = 70/228 (30%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ +++ V+ FC +G LD+A +M M K KP+ +T+T L++ K +
Sbjct: 370 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 429
Query: 243 LWN-----------------------------------LMVCKGCFPNLATFNVRIQHLV 267
L N M+ KG FP N+ I L
Sbjct: 430 LLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALC 489
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL--------DM---------- 309
R+ +A M Q G + V + VI GF R G L DM
Sbjct: 490 KDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVV 549
Query: 310 -----------------AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A + ML R ++P Y+T+IH C++G
Sbjct: 550 TYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKG 597
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
+ DM L G + N ++ L +S + A + E+PEK + + F+F I+++ +C
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYC 193
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ G+ DK ++ M+ GV P+ + Y T++S+F ++ R + + M +G P++
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 258 TFNVRIQHLVNKRRSWQANKL---MGLMQRFGI-EPDEVTYNLVIKGFCRSGHLDMAKKV 313
TFN RI L + + A+++ M L + G+ P+ +TYNL++KGFC+ G L+ AK +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++ + + + Y + L + G F A + K K PS+ + + L++GL K
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 374 NNQPCKANTIMALVQR 389
A TI+ L++R
Sbjct: 374 LGMLSDAKTIVGLMKR 389
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 24/300 (8%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCK 147
L +R F +E L+ LP R I +ML G K G+++ A F +
Sbjct: 269 LDASRIFSDME--LDEYLGLP---RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+++S N L+ L + L ++ +K I I+S+NI++ C++G+L A
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ M++ GV PD +TY L+ + + + L M+ C PN T N+ + L
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R +A +L+ M G D VT N+++ G C SG LD A ++ M
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM---------- 492
Query: 328 IYQTMIHYLCQEGDFNLAYI-MCKDSM-KKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+H G+ +YI + DS+ + N +P + T S LL GL K + +A + A
Sbjct: 493 ----RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 2/196 (1%)
Query: 192 VIKAFCEMGILDKAY--LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
V+ F + +DKA+ +V + KP V Y L+ + K+ R E + L+ MV
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P TFN+ I+ L + A +L M G +P+E T+ ++++G+C++G D
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
++ +AM ++PN+ IY T++ C+EG + + M + ++ VP + T ++ +
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 370 GLKKNNQPCKANTIMA 385
L K + A+ I +
Sbjct: 261 ALCKEGKVLDASRIFS 276
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D ++NI I FC+ G + A+ V+ +M+K G + TY +LI N+ +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL + M KG PN+ T+N IQ+L + A L+ M + I P+ ++ +I+ F
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 302 CRSGHLDMAKKVYSA 316
C+ DMA++V+
Sbjct: 675 CKVPDFDMAQEVFET 689
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ ++ C+ G +A + EM ++PD + Y I F K + +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC +L T+N I L K + ++ + LM M+ GI P+ TYN I+ C
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++ A + M+ + + PN ++ +I C+ DF++A
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 24/272 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A +M C + N L L + + + L ++ EK +
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY-GL 464
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-----------------------PDV 221
D + NI++ C G LDKA ++ M+ G PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
ITY+TL++ K R L+ M+ + P+ +N+ I H + + A +++
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G TYN +I G + + M + + PN Y T I YLC+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + M+KN P+V + L+E K
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G I A DM GC +++++ N+ + L + I + E+ EK I
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK-GISP 627
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N I+ CE ++ A ++ EM + + P+V ++ LI AF K ++ ++
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
V C +++ L+ + +A +L+ + G E Y +++ C+
Sbjct: 688 ETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 305 GHLDMAKKVYSAMLGR 320
L++A + M+ R
Sbjct: 747 DELEVASGILHKMIDR 762
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIE 100
K + P ++KL +AE+D EK +F + + + ++ +F VSRL A +F E
Sbjct: 12 KNITPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAE 71
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
++ K E ++ I YG+ ++ F+ M + C + K+ L +L
Sbjct: 72 DIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM-GILDKAYLVMVEMQKLGVKP 219
E L F + E + + S N++IKA C G +D + EM K G P
Sbjct: 132 VEENQLNLAFKFYKNMRE-IGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDP 190
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D TY TLIS + R + L+ MV K C P + T+ I L + +A + +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYV 250
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M+ GIEP+ TY+ ++ G C+ G A +++ M+ R PN Y T+I LC+E
Sbjct: 251 EEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M+ P Y T+++ ++N+ + + M G P +A+ NV I+ L
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 271 RSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A K+ M + G +PD TY +I G CR G +D AKK+++ M+ + P Y
Sbjct: 171 GTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++I+ LC + + A ++ K P+V T S+L++GL K+ + +A + ++
Sbjct: 231 TSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 390 R 390
R
Sbjct: 291 R 291
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 99/248 (39%), Gaps = 42/248 (16%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A F +M C TV + + + L S+++ ++ E+ K I+ ++F+
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGK-GIEPNVFT 264
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ ++ C+ G +A + M G +P+++TYTTLI+ K+ + + L + M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL------------ 296
+G P+ + I + +A + M GI P+ +T+N+
Sbjct: 325 LQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGL 384
Query: 297 -----------------------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++K C+ G A ++ ++ +PN+
Sbjct: 385 CTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKG 444
Query: 328 IYQTMIHY 335
++ +I +
Sbjct: 445 TWKLLIGH 452
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
+F + + + F +E LL K + E + + YGKA + + A+D F+ M
Sbjct: 67 SFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRM 126
Query: 142 HL-YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK---FHIQFDIFSFNIVIKAFC 197
+ CK+TVKS N L V+ + F V + +IQ + SFN+VIKA C
Sbjct: 127 GAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALC 186
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+G +D+A V M D TY+TL+ + R + L + M +G FPN
Sbjct: 187 RVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 246
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
FNV I L K +A+KL+ M G P+EVTYN ++ G C G LD A + + M
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 306
Query: 318 LGRRLMPNRKIYQTMIHYLCQEG 340
+ + +PN + T++ + G
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHG 329
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 7/302 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKAG 129
+R + + Y + + L R D LL+ + + P ++ + K G
Sbjct: 203 DRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALC---KKG 259
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A +M L GC + N+ + L L + L + + DI +F
Sbjct: 260 DLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI-TF 318
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
++ F + G V+V +++ G + + +Y++LIS +K+ + E G LW MV
Sbjct: 319 GTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVE 378
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KGC PN ++ I L + + +A + + M+ G P+ TY+ ++ G+ +G +
Sbjct: 379 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHK 438
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A V+ M + Y +I+ LC+ G A I+ K + + V S+++
Sbjct: 439 AILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIH 498
Query: 370 GL 371
G
Sbjct: 499 GF 500
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 4/235 (1%)
Query: 93 ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
R D + L+ ++ +G + I L+ K G +H M + +M GCK
Sbjct: 329 GRALDGVRVLVSLEEKGYRGNEFSYSSLISGLF-KEGKGEHGMQLWKEMVEKGCKPNTIV 387
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
+A + L + +L+E+ K H + F+++ ++ + E G + KA LV EM
Sbjct: 388 YSALIDGLCREGKPDEAKEYLIEMKNKGHTP-NSFTYSSLMWGYFEAGDIHKAILVWKEM 446
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ Y+ LI+ K+ + + +W M+ +G ++ ++ I N +
Sbjct: 447 TDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLV 506
Query: 273 WQANKLMG--LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
Q KL L ++PD VTYN+++ FC + A + + ML + P+
Sbjct: 507 EQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y +AG I A+ + +M C + + L ++ LK ++ +
Sbjct: 426 LMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSR- 484
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM--QKLGVKPDVITYTTLISAFYKDNRPE 238
I+ D+ +++ +I FC ++++ + +M ++PDV+TY L++AF N
Sbjct: 485 GIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVS 544
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQ---------------------HLVNKRRSWQANK 277
+ N M+ +GC P+ T ++ ++ L+ ++R+ A+
Sbjct: 545 RAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASN 604
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ +M + + P T+ L ++ C+
Sbjct: 605 IIEVMLQKFLLPKPSTWALAVQQLCK 630
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 160/383 (41%), Gaps = 44/383 (11%)
Query: 49 PALVKLKAER---DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH 105
P LV +R D K Q F +H+ + +++ + A R + L+
Sbjct: 67 PQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYR 126
Query: 106 QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+S G I Y AG A+ F MH +GC + ++S N L VL +S+
Sbjct: 127 MRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKR 186
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP------ 219
++ KF + D S+N+++ +C + +KA ++ EM K G+ P
Sbjct: 187 VEMAYNLFKVFKGKF--RADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYN 244
Query: 220 -----------------------------DVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
DVITYTT+I F + +++ MV K
Sbjct: 245 TMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK 304
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++AT+N IQ L K A + M G P+ +TYNLVI+G C G ++ A
Sbjct: 305 GVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERA 364
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT----ISA 366
+ M PN + Y +I Y C EG+ + A + + + +P++DT ISA
Sbjct: 365 MEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISA 424
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+ K ++ N ++ +V R
Sbjct: 425 MFVRKKSDDLLVAGNLLIEMVDR 447
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 4/259 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A++ +M G + S N LK + + F +E+ +K + D+ ++ VI
Sbjct: 224 ALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEM-KKRDCEIDVITYTTVI 282
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F G + +A V M K GV P V TY I K + + ++ MV KG
Sbjct: 283 HGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYV 342
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN T+N+ I+ L ++ +A + MG M+ G EP+ TYNLVI+ FC G +D A +
Sbjct: 343 PNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDL 402
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLC---QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M +PN Y +I + + D +A + + + + +VP T + +L G
Sbjct: 403 FQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNG 462
Query: 371 LKKNNQPCKANTIMALVQR 389
L A I+ L R
Sbjct: 463 LLLTGNQGFAKEILRLQSR 481
>gi|90399325|emb|CAJ86125.1| H0313F03.9 [Oryza sativa Indica Group]
Length = 466
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 3/314 (0%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P L+K+ A RDP + FK R N+ + + RLA RRF +E +L
Sbjct: 36 LSPNELLKIFANIRDPSLITGSFKRACDRRDYKPNEALYSLMIDRLASCRRFSDVEEVLA 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
++ + F R++ +YG A + A++T + M Y C + K+ N L +L
Sbjct: 96 RARAESFRFSDEFFYRLIKMYGNVANHPQKAIETLFAMPGYNCWPSTKTFNYVLHMLVCK 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + + + + + D FNI++K C+ G D A ++ EM K G P+V T
Sbjct: 156 RQYEVVHEVYLSA-SRLGVTLDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTT 214
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+TL++ + + + L M + + +N+ I L ++R +A L M
Sbjct: 215 YSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMV 274
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G P+ TY +++ G SG AK + S M R+ P ++ +I LC +
Sbjct: 275 PKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLD 334
Query: 344 LAYIMCKDSMKKNW 357
A+++ K +++ W
Sbjct: 335 DAHLVLKQMVEQAW 348
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C+P+ TFN + LV KR+ +++ R G+ D +N+++KG C+ G D A
Sbjct: 138 CWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAI 197
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M + +PN Y T++++LCQ G + A+ +C+ K++ + L+ GL
Sbjct: 198 SLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGL 257
Query: 372 KKNNQPCKA 380
+ + +A
Sbjct: 258 CREQRVTEA 266
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 149/343 (43%), Gaps = 16/343 (4%)
Query: 38 REPLVDKPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF 96
R L P+ P L KL + D +LF+ + A + +L F
Sbjct: 56 RRSLSLTPISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDF 115
Query: 97 DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNA 155
IE LL+ K +E + IM YGKAG+ A DM +Y C T KS N
Sbjct: 116 KVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNV 175
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L +L + + ++ + + +++F +V+KA C + +D A ++ +M K
Sbjct: 176 VLDILVDGDCPRVAPNVFYDMLSR-GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKH 234
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G P+ + Y TLI A ++NR L M C P++ TFN I L R +A
Sbjct: 235 GCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEA 294
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
KL+ M G D +TY ++ G CR G +D A+ A+L + PN +Y T+I
Sbjct: 295 AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEAR----ALLNKIPNPNTVLYNTLISG 350
Query: 336 LCQEGDFNLAYIMCKDSMKKNWV-----PSVDTISALLEGLKK 373
G F A KD + N V P T + +++GL K
Sbjct: 351 YVASGRFEEA----KDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 13/253 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-- 184
K G I+ A+ F +M GCK + + N+ + L ++ ++ E +H F
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKME-------EALSLYHDMFLE 511
Query: 185 ----DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++N ++ AF + +A+ ++ EM G D ITY LI A K E G
Sbjct: 512 GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKG 571
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL+ M+ KG FP + + N+ I L + A K + M G+ PD VTYN +I G
Sbjct: 572 LGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLING 631
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ GH+ A +++ + + P+ Y T+I C EG FN A ++ + ++P+
Sbjct: 632 LCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPN 691
Query: 361 VDTISALLEGLKK 373
T S L+ + K
Sbjct: 692 EVTWSILINYIVK 704
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 142/319 (44%), Gaps = 2/319 (0%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMI 131
N+I N + +S + RF+ + LL + + + + IM+ K G +
Sbjct: 334 NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
A++ +M + V + + + L+ + + K + + +N
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK-GLSLNTVGYNC 452
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I A C+ G +++A + EM G KPD+ T+ +LI+ K+++ E L++ M +G
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
N T+N + + + QA KL+ M G D +TYN +IK C++G ++
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ MLG+ + P +I LC+ G N A +D + + P + T ++L+ GL
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632
Query: 372 KKNNQPCKANTIMALVQRR 390
K +A+ + +Q
Sbjct: 633 CKMGHVQEASNLFNKLQSE 651
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 14/264 (5%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
M L+ +AG K TF C + L A D K I+ L ++ ++
Sbjct: 83 MELFQRAGAQKGYSHTFD-----ACYLLIDKLGAV-------GDFKVIEKLLKQMKDE-G 129
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIG 240
+ F F +++K + + G+ +A ++++M + P +Y ++ + P +
Sbjct: 130 LLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVA 189
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ M+ +G P + TF V ++ L A L+ M + G P+ V Y +I
Sbjct: 190 PNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHA 249
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C + + A ++ M P+ + + +IH LC+ G + A + + + +
Sbjct: 250 LCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTD 309
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
T L+ GL + Q +A ++
Sbjct: 310 ALTYGYLMHGLCRMGQVDEARALL 333
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML-YGKAGMIKHA 134
+ N+Y + +S R D + + + + + E + ++ Y G + A
Sbjct: 546 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 605
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVI 193
+ M G TV + N + L D + +A+ L+E + D+F++NI+I
Sbjct: 606 LLYRDRMVERGVAMTVATYNLLVHALF--MDGRGTEAYELVEEMGGKGLAPDVFTYNILI 663
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ G + KA + M + GV+ V+TYT LI A K + + + L++ V +G
Sbjct: 664 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 723
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+L +N I +A ++MG M++ I PD+VTYN +++G C G +D A+K+
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 783
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M R + P+ Y T+I +GD A + + M K + P++ T +AL++GL K
Sbjct: 784 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843
Query: 374 NNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSILSK 408
N Q A N + +V+ + S +S + + ++
Sbjct: 844 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITY 224
++A + E+ E+ I + +++ VI +C++G +D+A V EM G VKP+ + Y
Sbjct: 530 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 589
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI + + + + MV +G +AT+N+ + L R +A +L+ M
Sbjct: 590 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 649
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD TYN++I G C+ G++ A +++ M R + Y +I+ L ++G
Sbjct: 650 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 709
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++++ P + +AL+ + +A IM ++++
Sbjct: 710 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
TFN+ ++HL + + +A +L+ M R P+ VTYN VI GFC G + A +
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 539
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
M R + PN+ Y T+I C+ G + A + + + K V P +AL+ G
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 595
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML-YGKAGMIKHA 134
+ N+Y + +S R D + + + + + E + ++ Y G + A
Sbjct: 551 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 610
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVI 193
+ M G TV + N + L D + +A+ L+E + D+F++NI+I
Sbjct: 611 LLYRDRMVERGVAMTVATYNLLVHALF--MDGRGTEAYELVEEMGGKGLAPDVFTYNILI 668
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ G + KA + M + GV+ V+TYT LI A K + + + L++ V +G
Sbjct: 669 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 728
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+L +N I +A ++MG M++ I PD+VTYN +++G C G +D A+K+
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 788
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M R + P+ Y T+I +GD A + + M K + P++ T +AL++GL K
Sbjct: 789 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848
Query: 374 NNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSILSK 408
N Q A N + +V+ + S +S + + ++
Sbjct: 849 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ F +M G + TV + A + L++ ++ E + I+ D+
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR-GIRPDL 731
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I + G +D+A+ +M EM+K + PD +TY TL+ R + L +
Sbjct: 732 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 791
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+L T+N I K A ++ M G P +TYN +I+G C++G
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A+ + M+ + P+ Y ++I L E +
Sbjct: 852 GDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITY 224
++A + E+ E+ I + +++ VI +C++G +D+A V EM G VKP+ + Y
Sbjct: 535 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 594
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI + + + + MV +G +AT+N+ + L R +A +L+ M
Sbjct: 595 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 654
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD TYN++I G C+ G++ A +++ M R + Y +I+ L ++G
Sbjct: 655 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 714
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++++ P + +AL+ + +A IM ++++
Sbjct: 715 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
TFN+ ++HL + + +A +L+ M R P+ VTYN VI GFC G + A +
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 544
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
M R + PN+ Y T+I C+ G + A + + + K V P +AL+ G
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 600
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 160/331 (48%), Gaps = 4/331 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K + P ++KL KAE++P +F + + + F + RL + ++ +
Sbjct: 6 KVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLT 161
++ ++ E + + Y K M A++ F +M ++GC ++S N+ L
Sbjct: 66 VDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFI 125
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
ES + + F + + ++ ++NI+IK C+ +K ++ M + G+ PD+
Sbjct: 126 ESNQWREAELFFTYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDI 184
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG- 280
++Y TLI+A K L++ M +G P++ +N+ I + K +AN++
Sbjct: 185 LSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKR 244
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L+ + P TYN++I G C+ G LD + ++++ M P+ + +MIH L + G
Sbjct: 245 LLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAG 304
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+FN A + ++ ++ P V T +A+L GL
Sbjct: 305 NFNAAEKVFQEMIESGLSPDVRTYNAMLSGL 335
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 17/241 (7%)
Query: 134 AMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A T Y + + G CK LN AL++L E+ + A D F+++ +
Sbjct: 392 ADSTTYGLLINGLCKNGY--LNKALRILEEAENEGA--------------DLDTFAYSSM 435
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C+ G+L++A ++ +M+K K + + +LI+ + + + E + M K C
Sbjct: 436 VHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDC 495
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P + ++N I L R A + M G++PD +TY+L+I G CR +DMA
Sbjct: 496 APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALN 555
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
++ + +RL P+ +++ +IH LC ++A + + N VP + T + ++EGL
Sbjct: 556 LWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLY 615
Query: 373 K 373
K
Sbjct: 616 K 616
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
M++G K GM++ A++ + M K N+ + + L+ + L E+ K
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSK- 493
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ S+N +I C+ AYL + EM + G+KPD+ITY+ LI + + ++
Sbjct: 494 DCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMA 553
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
LW+ + K P+L N+ I L ++ A ++ M++ PD VT+N +++G
Sbjct: 554 LNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEG 613
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
++G A K++ +L L P+ Y LC + A D++ + +P+
Sbjct: 614 LYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPN 673
Query: 361 VDTISALLEGL 371
T + L+ +
Sbjct: 674 APTWNVLVRAV 684
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 36/224 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+F+ +I + G + A V EM + G+ PDV TY ++S ++ + LW
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N+M C N+ ++N+ IQ L++ ++ QA L+ G++ D TY L+I G C++
Sbjct: 349 NVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407
Query: 305 G-----------------------------------HLDMAKKVYSAMLGRRLMPNRKIY 329
G L+ A ++ M R N ++
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++I+ + A + ++ K+ P+V + + ++ GL K
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCK 511
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 228 ISAFYKDNRPEIGNGLWNLMV-CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
I A+ K + P+ L+ MV GC P + +FN + + + +A Q G
Sbjct: 85 IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ P+ TYN++IK C+ + K + + M L P+ Y T+I+ L + G+ L
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNL-LDA 203
Query: 347 IMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTI 383
+ D M V P V + L++G + KAN I
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEI 241
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G + + N + + L ++ ++ I ++
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNV 431
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+++I +F + G L +A + EM G+ PD ITYT+LI F K+N + N + +L
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 491
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC PN+ TFN+ I R +L M G+ D VTYN +I+GFC G
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
L++AK+++ M+ R++ PN Y+ ++ LC G+
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 36/297 (12%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G AM M YGC+ + L V+ +S L ++ E+ +I+ D
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAV 362
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++I+I C+ G LD A+ + EM+ G+ ++ITY LI F R + G L M
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ + PN+ TF+V I V + + +A +L M GI PD +TY +I GFC+ HL
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482
Query: 308 DMAKKVYSAMLGRRLMPN------------------------RKI-----------YQTM 332
D A ++ M+ + PN RK+ Y T+
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
I C+ G N+A + ++ + + P++ T LL+GL N + KA I +++
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + + +F+ +I C G + +A ++ M ++G KPD+IT TL++ +
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV GC PN T+ + + ++ A +L+ M+ I+ D V Y+++I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G LD A +++ M + + N Y +I C G ++ + +D +K+
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428
Query: 359 PSVDTISALLEGLKKNNQ 376
P+V T S L++ K +
Sbjct: 429 PNVVTFSVLIDSFVKEGK 446
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FNI+I +C+ +D + +M GV D +TY TLI F + + + L+
Sbjct: 500 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 559
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + PN+ T+ + + L + S +A ++ +++ +E D YN++I G C +
Sbjct: 560 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 619
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P K Y MI LC++G + A ++ + + P T
Sbjct: 620 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 679
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ L+ + K+ ++ ++R
Sbjct: 680 NILIRAHLGDGDATKSVKLIEELKR 704
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 8/293 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+++ E V R D+I ++ + ++L R +R ++ KA A+D F
Sbjct: 122 DEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRER----LRSGLVDIKA---DDAIDLF 174
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
DM TV + + +++ + A ++ K I ++++ +I+I FC
Sbjct: 175 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK-GIAHNLYTLSIMINCFCR 233
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
L A+ M ++ KLG +P+ IT++TLI+ + R L + MV G P+L T
Sbjct: 234 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 293
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
N + L + +A L+ M +G +P+ VTY V+ C+SG +A ++ M
Sbjct: 294 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 353
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R + + Y +I LC+ G + A+ + + K ++ T + L+ G
Sbjct: 354 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + N ++ C G +A L++ +M + G +P+ +TY +++ K + + L
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + + +++ I L A L M+ GI + +TYN++I GFC +
Sbjct: 350 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+ R++ PN + +I +EG A + K+ + + P T
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 469
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L++G K N KAN ++ L+
Sbjct: 470 TSLIDGFCKENHLDKANQMVDLM 492
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 3/189 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA I ++ F M L G + N ++ E L + E+ + +
Sbjct: 511 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPP 569
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++ I++ C+ G +KA + +++K ++ D+ Y +I ++ + L+
Sbjct: 570 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 629
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P + T+N+ I L K +A L M+ G PD TYN++I+
Sbjct: 630 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 689
Query: 305 GHLDMAKKV 313
G D K V
Sbjct: 690 G--DATKSV 696
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VI ++ L SA K + ++ L M KG NL T ++ I R+ A
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MG + + G EP+ +T++ +I G C G + A ++ M+ P+ T+++ LC
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G A ++ ++ P+ T +L + K+ Q A ++ ++ R
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 355
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F E EK ++ DI +NI+I C +D A+ + + GVKP V TY
Sbjct: 589 KALEIF--EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I K L+ M G P+ T+N+ I+ + + ++ KL+ ++R G
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706
Query: 287 IEPDEVTYNLVI 298
D T +VI
Sbjct: 707 FSVDASTIKMVI 718
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ F+ + A + D + +M+ G+ ++ T + +I+ F + + +
Sbjct: 186 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 245
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ G PN TF+ I L + R +A +L+ M G +PD +T N ++ G C SG
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 305
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M+ PN Y +++ +C+ G LA + + ++N S
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365
Query: 366 ALLEGLKKNNQ 376
+++GL K+
Sbjct: 366 IIIDGLCKHGS 376
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 148/363 (40%), Gaps = 37/363 (10%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+ + DPE Q+ + ++ +E+ + +L A FD +E L+ +
Sbjct: 60 LTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREG 119
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYD-MHLYGCKRTVKSLNAALKVLTESRDLKAI 169
G + + Y + A+D + ++ +G + N L VL E +K +
Sbjct: 120 HEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLL 179
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
++ E+ ++ IQ D+ + N +IKA C + A L++ EM V PD T+TTL+
Sbjct: 180 ESVYNEMTDR-GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH------------------------ 265
F ++ E + M+ GC P T NV I
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298
Query: 266 -----------LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
L A K+M LM + G +PD TYN VI ++G LD AK +
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ M+ R +P+ + T+I LC + A + ++ K P V T + L+ L K
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418
Query: 375 NQP 377
P
Sbjct: 419 GDP 421
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 5/274 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+LE S E +M + + G I+ A+ M GC T ++N +
Sbjct: 217 MLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYC 276
Query: 162 E-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ R A+ E+ + F + D ++N + C+ G + A VM M + G PD
Sbjct: 277 KMGRVEDALGYIQKEIADGF--EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY T+I+ K+ + G+ N MV +GC P+ TFN I L ++ R +A L
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G+ PD T+N++I C+ G + +++ M P+ Y +I +LC G
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 341 DFNLAYIMCKDSMKKNWVP-SVDTISALLEGLKK 373
A + K+ M+ N P S T + +++ L K
Sbjct: 455 KLVNALDLLKE-MESNGCPRSTVTYNTIIDALCK 487
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + HA+ M G V + N + L+++ +L + + ++ ++ + D +
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP-DTTT 372
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I A C L++A + E+ G+ PDV T+ LI+A K P +G L+ M
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P+ T+N+ I HL + + A L+ M+ G VTYN +I C+ ++
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A++V+ M + + + T+I LC+ + A + + +K+ PS T +++L
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552
Query: 369 EGLKKNNQPCKANTIM 384
K KA I+
Sbjct: 553 THYCKQGDLKKAADIL 568
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 2/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D ++ + G V + N + L + D + L E + D ++N
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGD-PHLGIRLFEEMKSSGCAPDEVTYN 444
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I C MG L A ++ EM+ G +TY T+I A K R E +++ M
Sbjct: 445 ILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAH 504
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G + TFN I L +R A +L+ M + G++P +TYN ++ +C+ G L A
Sbjct: 505 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKA 564
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M + Y T+I+ LC+ G +A + + K P+ + +++
Sbjct: 565 ADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQS 624
Query: 371 L-KKNN 375
L ++NN
Sbjct: 625 LFRRNN 630
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ A + F M +G R+ + N + L +++ + L+E K +Q ++N
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE-LIEQMVKEGLQPSNITYN 549
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ +C+ G L KA ++ M G + DV+TY TLI+ K R ++ L M K
Sbjct: 550 SILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 609
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
G P +N IQ L + A L M G PD +TY +V +G CR G
Sbjct: 610 GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 3/217 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I A C+ +++A V +M G+ +T+ TLI K R + L M
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +G P+ T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 537 VKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 596
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A K+ M + + P K Y +I L + + A + ++ + P T +
Sbjct: 597 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIV 656
Query: 368 LEGLKKNNQPCKA--NTIMALVQRR-VPHFSSNQLSA 401
GL + P K + ++ +V + +P FSS ++ A
Sbjct: 657 FRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLA 693
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D LV ++ GV+ D Y L++ + +R ++ ++N M +G P++ T N
Sbjct: 142 DAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I+ L + A ++ M + PDE T+ +++GF G ++ A +V + M+
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P R +I+ C+ G A + + + P T + + L +N A
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALK 321
Query: 383 IMALV 387
+M L+
Sbjct: 322 VMDLM 326
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 2/265 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ D+ +GC+ V S NA LK L ++ +Q LME + +I +
Sbjct: 206 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE-LMEEMVRMACPPNIVT 264
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ E+ + + N M
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMP 324
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N ++ L + R + +L+ M D+VT+N+++ FC++G +D
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ ML R MP+ Y T+I+ C+EG + A ++ K P+ + + +L
Sbjct: 385 RVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444
Query: 369 EGLKKNNQPCKANTIMA-LVQRRVP 392
+GL + A +M+ ++Q+ P
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCP 469
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + + + L E+ +K D
Sbjct: 309 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK-DCPLDD 367
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M + G PDVITYTT+I+ F K+ + L
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A LM M + G + +T+N +I C+ G
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G + A + + K P+ S+
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 548 IASALSREGR 557
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ---FD 185
G I A+ +M GC + L+ ++ + V E H + D
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA----VRVLEDLHARGCALD 191
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N+V+ A C+ G +D+A ++ ++ G +PDV++Y ++ R L
Sbjct: 192 VGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME 251
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV C PN+ TFN I +L + ++++ M G PD Y +I G C+ G
Sbjct: 252 EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEG 311
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
HL++A ++ + M L PN Y T++ LC
Sbjct: 312 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 5/246 (2%)
Query: 97 DYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLN 154
D + LLE L +G I ++ G K G+I A+ M GCK S
Sbjct: 384 DRVIELLEQM--LERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
LK L + + + ++ ++ + +FN +I C+ G++++A ++ +M
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
G PD+I+Y+T+I K + + L N+MV KG PN ++ L + R +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
++ +Q I D V YN VI C+ G + A + + M+ +PN Y +I
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620
Query: 335 YLCQEG 340
L EG
Sbjct: 621 GLASEG 626
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ V++A C G + A V+ EM + G P Y ++ A + +
Sbjct: 123 YTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLED 182
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +GC ++ N+ + + ++ +A L+ + FG EPD V+YN V+KG C +
Sbjct: 183 LHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKR 242
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+++ M+ PN + T+I YLC+ G F + + ++ P + +
Sbjct: 243 WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYAT 302
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+++G+ K A+ I+ R+P +
Sbjct: 303 IIDGICKEGHLEVAHEIL----NRMPSYG 327
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 121/300 (40%), Gaps = 7/300 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R++ E LL K P + I++ + + G++ +
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL---DDVTFNILVDFFCQNGLVDRVI 387
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M GC V + + + L L++ + + S+ IV+K
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C A +M +M + G + IT+ TLI+ K E L M+ GC P+
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M G+ P+ + Y+ + R G ++ +++
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ G+ A + VP+ T + L+ GL
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 626
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G+++ A++ M + GC + S + + L ++ K +A L+ V + +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG--KTDEALELLNVMVNKGMSPN 541
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ + A G ++K + +Q ++ D + Y +IS+ K E
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-----------LMQRFGI 287
MV GC PN +T+ + I+ L ++ +A +++ LM+ FGI
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGI 654
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G + + N + + L ++ ++ I ++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNV 333
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+++I +F + G L +A + EM G+ PD ITYT+LI F K+N + N + +L
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC PN+ TFN+ I R +L M G+ D VTYN +I+GFC G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
L++AK+++ M+ R++ PN Y+ ++ LC G+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 36/297 (12%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G AM M YGC+ + L V+ +S L ++ E+ +I+ D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAV 264
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++I+I C+ G LD A+ + EM+ G+ ++ITY LI F R + G L M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ + PN+ TF+V I V + + +A +L M GI PD +TY +I GFC+ HL
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 308 DMAKKVYSAMLGRRLMPN------------------------RKI-----------YQTM 332
D A ++ M+ + PN RK+ Y T+
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
I C+ G N+A + ++ + + P++ T LL+GL N + KA I +++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + + +F+ +I C G + +A ++ M ++G KPD+IT TL++ +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV GC PN T+ + + ++ A +L+ M+ I+ D V Y+++I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G LD A +++ M + + N Y +I C G ++ + +D +K+
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 359 PSVDTISALLEGLKKNNQ 376
P+V T S L++ K +
Sbjct: 331 PNVVTFSVLIDSFVKEGK 348
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+D F DM TV + + +++ + A ++ K I ++++ +I+I
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK-GIAHNLYTLSIMI 130
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC L A+ M ++ KLG +P+ IT++TLI+ + R L + MV G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+L T N + L + +A L+ M +G +P+ VTY V+ C+SG +A ++
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
M R + + Y +I LC+ G + A+ + + K ++ T + L+ G
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FNI+I +C+ +D + +M GV D +TY TLI F + + + L+
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + PN+ T+ + + L + S +A ++ +++ +E D YN++I G C +
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P K Y MI LC++G + A ++ + + P T
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ L+ + K+ ++ ++R
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKR 606
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + N ++ C G +A L++ +M + G +P+ +TY +++ K + + L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + + +++ I L A L M+ GI + +TYN++I GFC +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+ R++ PN + +I +EG A + K+ + + P T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L++G K N KAN ++ L+
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLM 394
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VI ++ L SA K + ++ L M KG NL T ++ I R+ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MG + + G EP+ +T++ +I G C G + A ++ M+ P+ T+++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G A ++ ++ P+ T +L + K+ Q A ++ ++ R
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 3/189 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA I ++ F M L G + N ++ E L + E+ + +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPP 471
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++ I++ C+ G +KA + +++K ++ D+ Y +I ++ + L+
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P + T+N+ I L K +A L M+ G PD TYN++I+
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 305 GHLDMAKKV 313
G D K V
Sbjct: 592 G--DATKSV 598
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M+ G+ ++ T + +I+ F + + + ++ G PN TF+ I L +
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A +L+ M G +PD +T N ++ G C SG A + M+ PN Y
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+++ +C+ G LA + + ++N S +++GL K+
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F E EK ++ DI +NI+I C +D A+ + + GVKP V TY
Sbjct: 491 KALEIF--EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I K L+ M G P+ T+N+ I+ + + ++ KL+ ++R G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 287 IEPDEVTYNLVI----KGFCRSGHLDM 309
D T +VI G + LDM
Sbjct: 609 FSVDASTIKMVIDMLSDGRLKKSFLDM 635
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 177/388 (45%), Gaps = 46/388 (11%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
KPL L KL KAE+ P+ LF + + + + F + RL+ + ++ +
Sbjct: 6 KPLSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLT 161
+E K+ E ++ ++ Y K+ M A+D F M ++GCK ++S NA L
Sbjct: 66 VELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFI 125
Query: 162 ESRDLKAIQAFLMEVP--------EKFHI---------QF-----------------DIF 187
E+ L+ ++FL + ++I QF D++
Sbjct: 126 EANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVY 185
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ VI + G L A V EM + G+ PDV+ Y +I F+K G +W +
Sbjct: 186 SYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERL 245
Query: 248 VCKGC-FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
V C +PN+ T+NV I L R ++ ++ M++ E D TY+ +I G C G+
Sbjct: 246 VKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGN 305
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG----DFNLAYIMCKDSMKKNWVPSVD 362
+D A +VY M+ R ++ + Y +++ C+ G F L +M K++ +V
Sbjct: 306 VDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-----NVV 360
Query: 363 TISALLEGLKKNNQPCKANTIMALVQRR 390
+ + + GL +N + +A ++ L++RR
Sbjct: 361 SYNIFIRGLFENRKVEEAISVWELLRRR 388
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 17/253 (6%)
Query: 134 AMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A T Y + ++G CK LN ALK+L E++D + D F+++ +
Sbjct: 392 ADSTTYGVLIHGLCKNG--HLNKALKILKEAKDGGD--------------KLDAFAYSSI 435
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ + G +D+A ++ +M K G + LI+ F + ++ E + M KGC
Sbjct: 436 VDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P + ++N I L R A + M +PD +TY+L++ G C+ +DMA
Sbjct: 496 SPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALN 555
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
++ +L + L P+ ++ ++H LC G A ++ + + N +P++ T + L++GL
Sbjct: 556 LWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLY 615
Query: 373 KNNQPCKANTIMA 385
K + A+ I A
Sbjct: 616 KARECEMASVIWA 628
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ + M YGC+ + N + + L+ F E+ K +
Sbjct: 441 KQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETK-GCSPTV 499
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+N +I C+ AY + EM + KPD+ITY+ L+ + + ++ LW
Sbjct: 500 VSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQ 559
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
++ KG P++ N+ + L + + A L M++ P+ VT+N ++ G ++
Sbjct: 560 VLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARE 619
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+MA +++ M P+ Y + LC G + + D++K +P+ T
Sbjct: 620 CEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYI 679
Query: 367 LLEGLKK 373
L+ + K
Sbjct: 680 LVRAVLK 686
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A+ F +M GC TV S N + L ++ +F+ E+ EK + D+
Sbjct: 476 RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK-DWKPDM 534
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++++++ C+ +D A + ++ G++PDV + L+ + E L++
Sbjct: 535 ITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PNL T N + L R A+ + M + G +PD ++YN+ +KG C G
Sbjct: 595 MKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGR 654
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ ++ L ++P + ++ + + G +
Sbjct: 655 ISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ E +K + D+F+++ +I C++G +D A V EM K V DV+TY L++ F
Sbjct: 277 MWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFC 336
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + + LW +M + C N+ ++N+ I+ L R+ +A + L++R G D
Sbjct: 337 RAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADST 395
Query: 293 TYNLVIKGFCRSGHLDMAKKV 313
TY ++I G C++GHL+ A K+
Sbjct: 396 TYGVLIHGLCKNGHLNKALKI 416
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 9/290 (3%)
Query: 90 LAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
LA F HLL+ ++S+P + I+ ++ Y +AGM A D F M YG
Sbjct: 144 LAKHHHFPLARHLLDEMRKRSIPISSQ--VILALIRRYVRAGMSSEASDLFRSMEEYGGG 201
Query: 148 RTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
++ A+L L++ R QA F D+ + ++ A+C G LDKA
Sbjct: 202 VPDPAVLASLLGALSKKRLASEAQALFDSYKSVF--TPDVVLYTTLVHAWCRSGCLDKAE 259
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V EMQ+ G+ P+V TYT +I A Y+ + L M+ GC PN ATFN ++
Sbjct: 260 QVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAH 319
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH--LDMAKKVYSAMLGRRLMP 324
V RS Q ++ M++ G +PD +TYN +++ C G LD A K+ M+ + P
Sbjct: 320 VKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTP 379
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ + M+ + G+ + A+ + + + P+V T + L++ K+
Sbjct: 380 DCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKD 429
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ ++G + A F +M G V + A + + + + Q L ++ +
Sbjct: 249 WCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS-GCPP 307
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +++A + G ++ V +M++LG PD+ITY L+ + + +
Sbjct: 308 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMK 367
Query: 245 NL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M+ KGC P+ TFN ++ +V A+KL MQ +P+ +TYNL++K F
Sbjct: 368 LLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFG 427
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK-KNWVPSV 361
+ +DM ++ M + + PN Y +I C G++ AY ++ ++ K+ P
Sbjct: 428 KDKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKK 487
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
+L L+K Q K ++ L+ R
Sbjct: 488 PVYDMVLVLLRKAGQLRKHEELVELMADR 516
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G A+D M K V + + L + L +F E+ K I+ ++
Sbjct: 242 KSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK-GIKANV 300
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N +I +FC G D ++ +M + P+V+T++ LI + K+ + L+N
Sbjct: 301 FTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNE 360
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G PN T+N I L N +R +AN++M LM G +PD TYN++I GFC++
Sbjct: 361 MITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQ 420
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D +++ M R ++ + Y T+I CQ +A + ++ + + P + T +
Sbjct: 421 VDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAI 480
Query: 367 LLEGLKKNNQ 376
LL+GL N +
Sbjct: 481 LLDGLCDNGE 490
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 36/267 (13%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
TV N +L ++ + A ++ K I +D+++ NI+I FC L A+
Sbjct: 89 TVIDFNRLFGLLARTKQYDLVLALCKQMELK-GIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
M ++ KLG +P+ +T+ TL++ + R L + MV P+L T N + L
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 269 KRRSWQANKLMGLMQRFGIEPDE-----------------------------------VT 293
K R +A L+ M G +P++ VT
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++I C+ G LD A +S M + + N Y ++I C G ++ + +D +
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKA 380
+ P+V T SAL++ L K + +A
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEA 354
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D + +M G + + N+ + L + L +M++ DI
Sbjct: 347 KEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ-MMDLMVSKGCDPDI 405
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI+I FC+ +D + +M G+ D +TY+TLI F + + + ++
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +G P + T+ + + L + +A ++ M + +E D YN++I G C +
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ ++ + + + + Y M+ LC+ + A + + + + P T +
Sbjct: 526 VDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNT 585
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
L+ + N + ++ ++R FSS+
Sbjct: 586 LIRAHLRGNDITTSVQLIEEMKR--CGFSSD 614
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + N ++ C + +A ++ M G +P+ TY +++ K L
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + P++ T+ + I +L R A M+ GI+ + TYN +I FC
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D ++ M+ R++ PN + +I L +EG A + + + + P+ T
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L+ GL + + +AN +M L+
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLM 396
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VI + L + + ++ L M KG +L T N+ I +R+ A
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MG + + G EP+ VT+N ++ G C G + A ++ M+ + +P+ T+++ LC
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMAL-VQRRVPH 393
+ + A + M P+ T +L N+ CK+ NT AL + R++ H
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPIL------NRMCKSGNTASALDLLRKMEH 258
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F++ + G + A D F + G ++K+ NA L+ L + L A + E+
Sbjct: 152 FLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEM 211
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E ++ + +S+ +IKA C+ G +D + ++ E+ + G++P V+TY L+ A K R
Sbjct: 212 RESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGR 271
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L M G P++ TF + I L R + ++ M++ G+ P+EV YN
Sbjct: 272 VEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNE 331
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+I CR GH A +++ M+ +++ P Y + LC+EG+ A + +D
Sbjct: 332 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILED 386
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ ++ + N +I CE + +A V+ M G++ D ITY +I KD++ E
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M +G P+L TFN + N + + L+ M+ G++PD V+Y +I G
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PS 360
C++ + AK+ + ++ R L PN IY +I + GD + A I ++MK N + P+
Sbjct: 583 CKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGA-IDAVETMKSNGIQPT 641
Query: 361 VDTISALL 368
T +L+
Sbjct: 642 NVTYGSLM 649
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 14/306 (4%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
F ++ LA RF + +L+ + L E ++ + + G A+ F +M
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 352
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFL---MEVPEKFHIQFDIFSFNIVIKAFCE 198
L K T + N K L + +++ + L + + H FN V+ +
Sbjct: 353 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL----FNTVVAWLLQ 408
Query: 199 MGI-LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
L+ + EM G++P+ T + K + + G+W + KG NLA
Sbjct: 409 RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLA 468
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T N I L + +A K++ M GIE D +TYN++I+G C+ ++ A K++ M
Sbjct: 469 TSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDM 528
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
R P+ + T++H C G + + + P + + +++G
Sbjct: 529 TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG------H 582
Query: 378 CKANTI 383
CKA I
Sbjct: 583 CKAKDI 588
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ ++ G + + NA + L E + +K + + K I+ D
Sbjct: 444 KGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNK-GIELDS 502
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I+ C+ +++A + +M + G KPD+ T+ TL+ A+ + E L +
Sbjct: 503 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 562
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P++ ++ I + +A + + + G++P+ YN +I G+ R+G
Sbjct: 563 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 622
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ A M + P Y ++++++C G
Sbjct: 623 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 656
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+FN ++ A+C +G +++ + ++ +M+ G++PD+++Y T+I K
Sbjct: 536 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL 595
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN--------- 295
++ +G PN+ +N I A + M+ GI+P VTY
Sbjct: 596 TELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHA 655
Query: 296 --------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++I+G+C+ G + A + M R + PN+ Y
Sbjct: 656 GLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTY 715
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
T+++ + G+ A + + + +P T L+
Sbjct: 716 TTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG+ G I A+D M G + T + + + + + ++ + + E ++
Sbjct: 617 YGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN-NVDL 675
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ + I+I+ +C++G + +A EM+ G+ P+ +TYTTL+ A+ K E + L+
Sbjct: 676 GVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLF 735
Query: 245 NLMVCKGCFPNLATFNVRI 263
+ MV G P+ T+ I
Sbjct: 736 DEMVGSGVIPDNITYGTLI 754
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G ++ M G + + S + +++D++ + +L E+ ++ ++
Sbjct: 547 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDR-GLKP 605
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F +N +I + G + A + M+ G++P +TY +L+ E ++
Sbjct: 606 NVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 665
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + + + IQ + +A M+ GI P+++TY ++ + +S
Sbjct: 666 SQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKS 725
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
G+ + A K++ M+G ++P+ Y T+I
Sbjct: 726 GNSEEASKLFDEMVGSGVIPDNITYGTLI 754
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG + A+ F +M G V + + + + + +L+ A + ++ E+ ++
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER-GLRM 328
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ F+F +I FC G LD A L M EM++ ++P V+ Y LI+ + K R + L
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG P++ T++ + + A +L M + G+ PD +TY+ +I+G C
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A +++ ML L P+ Y T+I C+EG+ A + + +KK +P V T
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L++GL K+ + +A ++
Sbjct: 509 SVLIDGLSKSARTKEAQRLL 528
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+++++NI+++A C G ++A +V +M+ G P+V+TY TL++AF + + L
Sbjct: 153 NVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERL 212
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+M G P+L TFN + L R A K+ M R G+ PD V+YN ++ G+C+
Sbjct: 213 VGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCK 272
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G L A V++ M + ++P+ + ++IH +C+ G+ A + ++ + T
Sbjct: 273 AGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT 332
Query: 364 ISALLEGLKKNN 375
+AL++G +N
Sbjct: 333 FTALIDGFCRNG 344
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM GC V + N + + ++ A + L+ V + ++ + +FN V+ C+
Sbjct: 180 DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAER-LVGVMREGGVRPSLVTFNTVVNGLCKA 238
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G ++ A + EM + G+ PD ++Y TL+S + K ++ M KG P++ TF
Sbjct: 239 GRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF 298
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
I + +A L+G M+ G+ +E T+ +I GFCR+G LD A M
Sbjct: 299 TSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRE 358
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
R+ P+ Y +I+ C+ G + A + + K P V T S +L G K
Sbjct: 359 CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLW 244
+ ++N V+ A + L A ++ M + GV P+V TY L+ A + R E +
Sbjct: 120 LLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVG 178
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC PN+ T+N + A +L+G+M+ G+ P VT+N V+ G C++
Sbjct: 179 DDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKA 238
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A+K++ M L P+ Y T++ C+ G + A + + +K VP V T
Sbjct: 239 GRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF 298
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
++L+ + + +A ++ ++ R
Sbjct: 299 TSLIHAMCRAGNLERAVALVGQMRER 324
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A + ++M G K V + + L + D + ++ +K +
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP- 433
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CE L A + +M +LG++PD TYTTLI K+ + L
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ M+ KG P++ T++V I L R+ +A +L+ + PD + Y +
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGF G ++ A KVY +ML R + +Y +IH C+ G+ A
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFH 613
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K ++ + P+ + +L+ GL + +A+ ++
Sbjct: 614 KQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVI 648
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 166/344 (48%), Gaps = 11/344 (3%)
Query: 54 LKAERDPEKLFQLFK---ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L+ + DP+ LF+ +N + + + ++ +++L A+ F +E +L K+
Sbjct: 18 LRLQEDPKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFHEMEQILLQFKT-- 75
Query: 111 QGR---REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
Q R +E I+ YG+AG+ ++A+ F +M LY C+RT+KS N L VL ++
Sbjct: 76 QTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTLLNVLMICKEFD 135
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
++ + + K H++ D +FNI+I+ C G +D A V+ EM+ + P+ +T+ TL
Sbjct: 136 VMREHFVNI--KRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTL 193
Query: 228 ISAFYKDNRPEIGNGLWNLMV-CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
I + + + L + MV G PN + I+ L A +L M+R G
Sbjct: 194 IYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDG 253
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
++ D Y+ +I G + G D V M + + Y MI+ C++ DF AY
Sbjct: 254 VKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAY 313
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + M+ P V + + +L L K+ + +A+ + + RR
Sbjct: 314 KILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRR 357
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E E+ ++ D ++ +I ++G D+ + V++EM+ G K D +TY +I+ F
Sbjct: 245 LKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFC 304
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
KD E + + M+ C P++ ++NV + L + +A+ L M R G PD V
Sbjct: 305 KDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVV 364
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+Y +V G + A + M+ + P I+ LCQ GD +L +
Sbjct: 365 SYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVW 418
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLP-QGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
+ + + + R+FD HL++ KS + E F + ++ Y +AG+ A+ F
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI-LIRRYVRAGLASEAVHCFN 210
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M YGC + + + L+ R Q+F + ++F + D+ + +++ +C
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRA 268
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + +A V EM+ G++P+V TY+ +I A + + + ++ M+ GC PN TF
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N ++ V R+ + ++ M++ G EPD +TYN +I+ CR +L+ A KV + M+
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ N + T+ Y+ ++ D N A+ M M+ P+ T + L+
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 7/303 (2%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHA 134
+ +K AF +S L+ RR + + SL I+ ++ G +AG I A
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFD---SLKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
F +M L G + V + + + L + ++ + + +FN +++
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS-GCAPNAITFNNLMR 333
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
+ G +K V +M+KLG +PD ITY LI A +D E + N M+ K C
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N +TFN +++ KR A+++ M EP+ VTYN++++ F S DM K+
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISALLEGLKK 373
M + + PN Y+ ++ C G +N AY + K+ + +K PS+ +L L++
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 374 NNQ 376
Q
Sbjct: 514 AGQ 516
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 158/351 (45%), Gaps = 15/351 (4%)
Query: 48 PPALVK-LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
P L++ L+ + D ++F + + + +E+ + +L A F+Y+ +LE
Sbjct: 64 PKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEM 123
Query: 107 KSLPQGRREGFIMRIMMLYGK-------AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
K G + + YGK G++K D Y K + N L V
Sbjct: 124 KLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDE------YRIKPDTRFYNVLLNV 177
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L ++ LK +++ + + I+ D+ +FNI+IKA C+ + A L+M EM G+ P
Sbjct: 178 LVDANKLKLVESAHSSMVRR-RIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP 236
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D T+TT++ + + + + MV GC T NV I + R QA +
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFI 296
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G PD+ TYN ++ G C+ GH A +V AML L P+ Y ++I LC+
Sbjct: 297 QEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKL 356
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G+ A + + ++ P+ T +A++ L K N+ +A I L+ +
Sbjct: 357 GEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
++E S E IM Y + G + A+ M YGC T ++N +
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284
Query: 162 ESRDLKAIQAFLME-VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ + +F+ E V E F + D F++N ++ C++G A V+ M G+ PD
Sbjct: 285 KQGRIDQALSFIQEAVSEGF--RPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
+ TY +LIS K E + + MV + C PN T+N I L + R +A ++
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L+ GI PD T+N +I+G C S + A ++ M G+ P+ Y +I LC
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
A + K+ +V + L++G KN + +A I
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
K AMD F +M GC+ + N + L SR L+ L E+ E ++ +N
Sbjct: 430 KSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM-ELNGCARNVVIYNT 488
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I FC+ +++A + EM+ GV D +TY TLI K R E L + M+ +G
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P+ T+N + H +A ++ M G PD VTY +I G C++G + +A
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ ++ + ++ Y +I L + + A + ++ + K+ P T + GL
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668
Query: 372 KKNNQPCKAN---TIMALVQRRVPHFSS 396
P T+ + + +P FSS
Sbjct: 669 CNGGGPIGEAVDFTVEMIERGNIPEFSS 696
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 5/271 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I+ A+ M C + NA + L + + + K I D+
Sbjct: 355 KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK-GILPDV 413
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I+ C A + EM+ G +PD TY LI + + E L
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC N+ +N I +R +A ++ M+ G+ D VTYN +I G C+S
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ M+ L P++ Y +++ + C+ GD A + + P + T +
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 367 LLEGLKKNNQPCKANTIMALVQRR----VPH 393
L+ GL K + A+ ++ +Q + PH
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPH 624
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 166/386 (43%), Gaps = 41/386 (10%)
Query: 33 NKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAG 92
NK P + + E +++L+ E D F++ A+++ + ++ + +L
Sbjct: 32 NKPPEYQEIKTPIKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGR 91
Query: 93 ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
D +++LL+ K E + ++ Y + G+ + A+ FY + +GC+ TVK
Sbjct: 92 ECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKI 151
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N L + + I+ + + +++++NI++KA C+ +D A ++VEM
Sbjct: 152 YNHLLDAMLSENRFQMIEPIYSNMKRDGK-EPNVYTYNILLKALCKNNRVDGACKLLVEM 210
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
G +PDV++YTT+IS+ K + E L PN++ +N I + +
Sbjct: 211 SNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNALINGFCREYKV 265
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML-------------- 318
+ L+G M GI+P+ +TY+ VI G++++A V++ M
Sbjct: 266 KEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSL 325
Query: 319 -------GRRL--------------MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
GR L PN Y T+IH LC G A + +
Sbjct: 326 MKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGC 385
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P+V T AL++G K A+ I
Sbjct: 386 SPNVSTYGALIDGFAKAGDLVGASEI 411
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 164 RDLKAIQAFLM--EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
R+ K + FL+ ++ EK I ++ +++ VI + +G ++ A V +M G P+V
Sbjct: 261 REYKVKEVFLLLGQMVEK-GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
T+T+L+ ++ R +WN M +G PN+ +N I L + + +A +
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+R G P+ TY +I GF ++G L A ++++ M+ +PN +Y +M++ LC+
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
F+ A+ + + N P+ T + ++GL
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGL 469
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 2/244 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ M GC V + A + ++ DL ++ I ++
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP-NVVV 426
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ C + +A+ ++ +M P+ +T+ T I R E L+ M
Sbjct: 427 YTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME 486
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC PN+ T+N + L+ + R +A +L+ M+ G+E + VTYN + GFC G +
Sbjct: 487 QYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFE 546
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDTISAL 367
A K+ ML + P+ Y T+ + C +G A ++ K S WVP V ++L
Sbjct: 547 EALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSL 606
Query: 368 LEGL 371
L G+
Sbjct: 607 LWGI 610
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 3/212 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A+ + M + GC V + + +K R L+A+ + E F + ++
Sbjct: 298 GNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGF--EPNVV 355
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C G + +A V +M++ G P+V TY LI F K + +WN M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ GC PN+ + + L QA L+ M P+ VT+N IKG C SG +
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ A ++ M PN K Y ++ L +E
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKE 507
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 17/302 (5%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRRE--GFIMR--------------IMMLYGKAG 129
T L AR ++ + +L+H + G + G +M ++ +Y + G
Sbjct: 53 TTHILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREG 112
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M+ A++TF M + G +V + N L L + R + A+ F E+ + + D+ +F
Sbjct: 113 MVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLAR-RVCPDVSTF 171
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI+I C G L KA ++ +M++ G P V+TY T+++ + K R + L + M
Sbjct: 172 NILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGS 231
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG + T+N+ + L RS + L+ M++ I P+E+TYN +I GF + G +
Sbjct: 232 KGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGA 291
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +++ M L+PN Y +I C +G+F A + + P+ + SALL
Sbjct: 292 ATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLN 351
Query: 370 GL 371
GL
Sbjct: 352 GL 353
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G +K A M G +V + N L + KA + ++ K I+ D +
Sbjct: 182 GKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSK-GIEADACT 240
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+++ C+ K YL++ +M+K + P+ ITY ++I+ F K+ + ++ M
Sbjct: 241 YNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMS 300
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN T+N I + QA ++ +M+ G +P+EV+Y+ ++ G CR +
Sbjct: 301 MLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFE 360
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++K + M ++ Y MI LC+ G N + + +K VP V T S L+
Sbjct: 361 LSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLI 420
Query: 369 EGL 371
G
Sbjct: 421 NGF 423
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C G ++A ++ M+ G KP+ ++Y+ L++ + + E+ + M
Sbjct: 310 TYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERM 369
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G + I L ++ KL+ M + G+ PD VT++++I GFCR G +
Sbjct: 370 RMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKI 429
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
K++ M L PN IY T+I+ C+ GD A+
Sbjct: 430 KNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI++ + + L K + M + G+ PD +T +LI F K ++G L M
Sbjct: 732 TYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKM 791
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G + TFN+ I +A L+ +M F I PD T++ +I R +
Sbjct: 792 LLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTV 851
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI-SA 366
+ + ML R +P+R+ Y +++ +C+ G + A+ + KD M+ + S D SA
Sbjct: 852 QESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKL-KDEMEALGISSGDVAESA 910
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+ GL K + +A ++ + R+
Sbjct: 911 LVRGLAKCGKVEEAKLVLDFMLRK 934
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++M Y + + A D M+L+ + + ++ + VL+ ++ L E+ E+
Sbjct: 806 LIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERG 865
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D + ++ C MG + A+ + EM+ LG+ + + L+ K + E
Sbjct: 866 CIP-DRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEA 924
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + M+ K P +ATF + +A KL M ++ D + YN++I G
Sbjct: 925 KLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISG 984
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
C G + A K+Y + R L PN Y +I
Sbjct: 985 LCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D +FN++I +CE + KA+ ++ M + PD+ T+ ++IS + + + +
Sbjct: 796 VAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESH 855
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + M+ +GC P+ + + + A KL M+ GI +V + +++G
Sbjct: 856 LLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGL 915
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ G ++ AK V ML + L+P + T++H C+
Sbjct: 916 AKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCR 952
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI---------------- 228
D+ +F+++I FC +G + ++ +M K G+ P+ I YTTLI
Sbjct: 412 DVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVY 471
Query: 229 -------------------SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
S+ KD + + ++ M G PN TF+ I N
Sbjct: 472 VAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNS 531
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A + M + G P TY ++K CR+G AK++ + + Y
Sbjct: 532 GNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTY 591
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
T++ + G A + + +++N +P T + + GL
Sbjct: 592 NTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 100/264 (37%), Gaps = 2/264 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A + M G N + L + + + F + + ++
Sbjct: 458 YCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPN 517
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I +F+ +I + G KA+ + EM K G P TY L+ A + + + L
Sbjct: 518 SI-TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + + T+N + A L M + + PD TY ++ G R
Sbjct: 577 DKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRR 636
Query: 305 GHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + A Y +LG+ + P + +Y T + L + G A C+D K +
Sbjct: 637 GKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIA 696
Query: 364 ISALLEGLKKNNQPCKANTIMALV 387
+ +L G + + KA I ++
Sbjct: 697 TNVILNGYSRMGKMAKAGDIFTMM 720
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + + +I FC+ +LD ++ +M GV D T+ LI + + + L
Sbjct: 764 DKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N+M FP++ T + I L +++ L+ M G PD Y ++ CR
Sbjct: 824 NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRM 883
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
GH+ A K+ M + ++ L + G A ++ ++K+ +P++ T
Sbjct: 884 GHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATF 943
Query: 365 SALLEGLKKNNQPCKA 380
+ L+ +N +A
Sbjct: 944 TTLMHMFCRNESLVEA 959
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N++I C+ G + A+ + + G +P V+TY+T+I +DN + G L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +GC PN T+N + L+ + R+ +A L+ M G P+ +T+ L+IKG C+ G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A +V M+ R +P+ +I+ ++H LC+ G + A+ + + + P T +
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
+++GL K + A ++ L+ FSS + F
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAE---SFSSPTVFTF 214
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V + + + L++ + L ++ E + + +++ V+ ++G ++
Sbjct: 538 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE-LGCRANTVTYSTVVDGLLKVGRMED 596
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A +V+ +M+ G PD +TY TLI F+K R GL M+ G P++ T+
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM- 323
L R +A +++ M G P+ +TY+ ++ G C++G + A + M ++
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ Y +I LC+ G + AY + ++ +P V T S L+ GL
Sbjct: 717 PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 9/239 (3%)
Query: 146 CKRTVKSLNAALKVLTES---RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC-EMGI 201
C+ T+ + N + L++S RD + F++E + D+ +FN V+ C E I
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIES----GLSPDVITFNSVLDGLCKEQRI 524
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A+ V + G +P+V+TY+TLI K + + L MV GC N T++
Sbjct: 525 LD-AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 583
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ L+ R A ++ M+ G PD VTYN +I GF + L A + ML
Sbjct: 584 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
P+ Y T+ H LC+ G F+ A + + P+ T S++++GL K + +A
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 702
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 141/329 (42%), Gaps = 13/329 (3%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
KA R E L F+ A + +V + A+ + L A R D LE + + GR
Sbjct: 695 KAGRVTEAL-GYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLE--RMIRAGRI 751
Query: 115 EGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+ +++ G AG I ++ F M GCK + + NA + + A A
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811
Query: 173 LMEVPEKFH-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L E+ K H I + + IVIKA C +D+A + + D I+Y TLI++
Sbjct: 812 LEEM--KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE--DCRDEISYNTLITSL 867
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
R E L MV G P+ + + L A KL+ M+ G PD
Sbjct: 868 VASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDL 927
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TY ++I G ++ L +A + ML + L P+ +Y ++I C+ + A+ + +
Sbjct: 928 RTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS 987
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKA 380
S + P++ S +++ L KN KA
Sbjct: 988 SGIE---PTITMYSTMVDSLCKNRGTDKA 1013
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K A M GC + + +K L + +++A + E+ ++ + D+
Sbjct: 85 GRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVP-DVEI 143
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+++ A CE+G +D+A+ ++ +G PD +TY T++ YK R E + L+
Sbjct: 144 HTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLA 203
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P + TF + + L A + M + G+ P+ VTY+ +I G C++G LD
Sbjct: 204 ESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLD 263
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+A + + + + +++H LCQ A + K VP+V ++L+
Sbjct: 264 IALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK---AMPCVPNVVCFNSLM 317
Query: 369 EGL 371
GL
Sbjct: 318 NGL 320
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 99/205 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N ++ + G++ A ++ M + G+ PDVIT+ +++ K+ R + ++
Sbjct: 473 LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 532
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +GC PN+ T++ I L + +A +L+ M G + VTY+ V+ G + G
Sbjct: 533 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 592
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A V M +P+ Y T+I + A + ++ ++ + PSV T +
Sbjct: 593 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 652
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
L GL ++ + +A I+ + R
Sbjct: 653 TLCHGLCRSGRFDEAVEILDYMAAR 677
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 130/330 (39%), Gaps = 55/330 (16%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
+AF + L A R + LL+ +P +M + +A + A + F
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLC---QARRVDEAFELFDV 335
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF-HIQF---------DIFSFN 190
M GC V + N LK L + R +PE + H++ ++ +F+
Sbjct: 336 MKESGCSADVITYNILLKGLCKLR----------RIPEAYRHVELMRRTEGCSPNVVTFS 385
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYK--DNR----------- 236
+I+ C G +++A+ V M + G+ P+ TY L+ K D+R
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445
Query: 237 -------------PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
PE+ + ++ + C P L T+N + L A L+ M
Sbjct: 446 REWRSSSSWPIHSPEV-----DFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMI 500
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G+ PD +T+N V+ G C+ + A V+ L R PN Y T+I L + +
Sbjct: 501 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 560
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + ++ + T S +++GL K
Sbjct: 561 EALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 101/264 (38%), Gaps = 43/264 (16%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+F + + +++ VI C +DK ++ EM G P+ +TY TL++A R +
Sbjct: 29 QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAK 88
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR-------------- 284
L M GC P L TF + I+ L + A +++ M
Sbjct: 89 EAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLL 148
Query: 285 ---------------------FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
G PD VTYN ++ G ++G L+ A V +
Sbjct: 149 HALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSS 208
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANT 382
P + + L + G+ AY DSM + V P+ T AL++GL CKA
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEF-FDSMPQTGVSPNTVTYDALIDGL------CKAGK 261
Query: 383 IMALVQRRVPHFSSNQLSAFKSIL 406
+ + S + AF S+L
Sbjct: 262 LDIALGLLRDKNSQAGMFAFSSLL 285
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 58/352 (16%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKH 133
V N ++ + L A + D LL + S + G +L+G +A ++
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNS-----QAGMFAFSSLLHGLCQAHRLEE 296
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIV 192
A+ M C V N+ + L ++R + +AF L +V ++ D+ ++NI+
Sbjct: 297 AIQLLKAMP---CVPNVVCFNSLMNGLCQAR--RVDEAFELFDVMKESGCSADVITYNIL 351
Query: 193 IKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC-K 250
+K C++ + +AY + M++ G P+V+T++TLI R ++ MV +
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVE 411
Query: 251 GCFPNLATFNVRIQHLVNK--------------RRSWQANK-----------LMGLMQRF 285
G PN T+ ++ L R W+++ LM + R
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCR- 470
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
P VTYN ++ G +SG + A + M+ L P+ + +++ LC+E A
Sbjct: 471 ---PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQ--------------PCKANTI 383
+ + K ++++ P+V T S L++GL K + C+ANT+
Sbjct: 528 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 579
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 33/283 (11%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G A++ M GC + ++ + L ++ + + ++ + +
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C+ G +D+AY + M + G PDV+T++ LI+ R + G L+
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +GC ++ +N I K A L+ M+ GI + VT+ +VIK C +
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839
Query: 307 LD---------------------------------MAKKVYSAMLGRRLMPNRKIYQTMI 333
+D A ++ AM+ P+ Y T++
Sbjct: 840 IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L + G +A + ++ + P + T + ++ GL K Q
Sbjct: 900 DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQ 942
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
++ ++ ++ L +RR + LL + M +M KAG + A
Sbjct: 856 DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G +++ + L++++ L + E+ K +++ D ++ +I AFC+
Sbjct: 916 QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK-NLKPDAIVYSSLIDAFCK 974
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+D A+ ++ + G++P + Y+T++ + K+ + + M K C P +
Sbjct: 975 ADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHI 1031
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQ 283
+ V + R +A KL+ +Q
Sbjct: 1032 WTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 146/322 (45%), Gaps = 9/322 (2%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
K++R E FQ+F A ++ +K + + L R E LL+ ++P
Sbjct: 477 KSDRSGEA-FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD---AMPDPDT 532
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
F I L K G + A+ + M + N + ++ + + A
Sbjct: 533 YAFNCCINGL-SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 591
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ K ++Q D+ +F +I C+ G ++ A ++ M LGV P+V+TY L+ K
Sbjct: 592 EMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R E MV GC P+ T+ + L R+ A +L+ ++ FG +PD VTY
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD--- 351
N+++ G +SG + A V M+G+ P+ Y T+I LC+ GD A + D
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770
Query: 352 SMKKNWVPSVDTISALLEGLKK 373
+ + VP+V T S L+ GL K
Sbjct: 771 RVSRCCVPNVVTYSVLINGLCK 792
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 127 KAGMIKHAMDTFY-DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
+AG A++ F +M G T+ + N + L +S +L A E+ E+ H D
Sbjct: 192 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGH-HPD 250
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I + C+ G L++A + +M P+V+TY+ LI+ K R + L
Sbjct: 251 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQ 310
Query: 246 LMVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLMGLMQ--RFGIEPDEVTYNLVIKGF 301
M K C PN+ T+N + L + + +A +LM ++ + PD VT++ +I G
Sbjct: 311 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 370
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G +D A V+ M+ +PN Y +++ LC+ A+ M + + K P V
Sbjct: 371 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 430
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
T S L++ K + + + + L+ + + F SI+
Sbjct: 431 ITYSVLVDAFCKAS---RVDEALELLHGMASRGCTPNVVTFNSII 472
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N+++ C+ +++A+ ++ M GV PDVITY+ L+ AF K + + L
Sbjct: 888 NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ-RFGIEPDEVTYNLVIKGFCR 303
+ M +GC PN+ TFN I L +S +A ++ M + G+ PD++TY +I G R
Sbjct: 948 HGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFR 1007
Query: 304 SGHLDMAKKVYSAM----------------------------LGRRLMPNRKIYQTMIHY 335
+G A+ + AM L L+P++ + +I
Sbjct: 1008 TGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAG 1067
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
C+ G+F A + ++ + KN P V T AL++GL K Q
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQ--KLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+I ++N + C+ ++ +A +M ++ L V PD +T++TLI K + +
Sbjct: 816 NIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 875
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ M+ G PN+ T+NV + L + +A+ ++ M G+ PD +TY++++ FC
Sbjct: 876 VFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 935
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSV 361
++ H+D A ++ M R PN + ++I LC+ A+ M D ++K P
Sbjct: 936 KASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDK 995
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
T L++GL + +A ++
Sbjct: 996 ITYCTLIDGLFRTGWAGQAEVLL 1018
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQFD 185
KAG ++ A DM C V + + + L + + + + E+ K + +
Sbjct: 263 KAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 322
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQ--KLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I ++N + C+ + +A +M ++ L V PD +T++TLI K + + +
Sbjct: 323 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 382
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ G PN+ T+N + L + +A+ ++ M G+ PD +TY++++ FC+
Sbjct: 383 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 442
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSVD 362
+ +D A ++ M R PN + ++I LC+ A+ M D ++K VP
Sbjct: 443 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKI 502
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T L++GL + + +A ++
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALL 524
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 41/247 (16%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVM-VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +NIV+++ C G +A + EM + GV P ++TY T+I+ K N G L+
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+V +G P++ T+N I L +A +L G M P+ VTY+++I G C+
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 305 GHLDMAKKVYSAMLGR---------------------------------------RLMPN 325
G +D A+++ M + R+ P+
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT-IM 384
+ T+I LC+ G + A + D + +VP+V T +AL+ GL K ++ +A+ I
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419
Query: 385 ALVQRRV 391
++V + V
Sbjct: 420 SMVDKGV 426
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IFSFN + + G KA + +P+ TY+TL+ A YK ++ L
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG-DVERTLGF 169
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++A +N+ +Q L + +A ++ G M R G+ P VTYN +I G C+S
Sbjct: 170 FRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKS 229
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L +++ ++ R P+ Y T+I LC+ GD A + D ++ VP+V T
Sbjct: 230 NELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTY 289
Query: 365 SALLEGLKK 373
S L+ GL K
Sbjct: 290 SVLINGLCK 298
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 65/246 (26%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A + F DM G V + N + L ++ ++ A + + +K + D+
Sbjct: 866 KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK-GVTPDV 924
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQ--------------------------------- 213
++++++ AFC+ +D+A ++ M
Sbjct: 925 ITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDD 984
Query: 214 ---KLGVKPDVITYTTLISAFYK-----------DNRPEIG--------NGLWNL----- 246
K G+ PD ITY TLI ++ D P+ NGL L
Sbjct: 985 MTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSR 1044
Query: 247 ----MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M+ P+ TFN+ I QA+ L M ++PD +T+ +I G C
Sbjct: 1045 ALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 1104
Query: 303 RSGHLD 308
++G ++
Sbjct: 1105 KAGQVE 1110
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 20/125 (16%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME---VPEKFHI 182
G AG + +D D Y + N + L++ D+ ++E VP+K
Sbjct: 1009 GWAGQAEVLLDAMPDPDTY-------AFNCCINGLSKLGDVSRALHRMLELELVPDKV-- 1059
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+FNI+I C+ G ++A + EM ++PDV+T+ LI K + E
Sbjct: 1060 -----TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE---A 1111
Query: 243 LWNLM 247
W++M
Sbjct: 1112 TWDIM 1116
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 9/284 (3%)
Query: 90 LAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
LA F HLL+ ++S+P + I+ ++ Y +A M A D F M YG
Sbjct: 155 LAKHHHFPLARHLLDEMRERSVPISAQ--LILALIRRYVRAEMPSEASDLFRRMEEYGAG 212
Query: 148 RT-VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+L + L L++ R QA F D+ + ++ A+C G LD+A
Sbjct: 213 APDPATLASLLGALSKKRLASEAQAMFDSYKSVF--TPDVVLYTTLVHAWCRSGRLDEAE 270
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V EMQ+ GV P+V TYT +I A Y+ + L M+ GC PN ATFN ++
Sbjct: 271 RVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAH 330
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH--LDMAKKVYSAMLGRRLMP 324
V RS Q ++ M++ G EPD +TYN +++ C G LD A K+ + M+ + +P
Sbjct: 331 VKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIP 390
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ + M+ + G+ N A + + + P+V T + L+
Sbjct: 391 DCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLM 434
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ ++G + A F +M G V + A + + + + Q L ++ +
Sbjct: 260 WCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS-GCPP 318
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +++A + G ++ V +M++LG +PD+ITY L+ + + +
Sbjct: 319 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMK 378
Query: 245 NL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M+ KGC P+ TFN ++ ++ A KL MQ +P+ VTYNL+++ F
Sbjct: 379 MLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFN 438
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI----MCKDSMKKNWV 358
+DM ++ M + + PN Y +I C G++ A++ M ++ K
Sbjct: 439 LEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTK 498
Query: 359 PSVDTISALL 368
P D + ALL
Sbjct: 499 PVYDMVLALL 508
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G I+ A+ + +M G K + S + + + + A+L E+ F +
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-RCFGLVP 329
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +VI FC G++ A V EM G PDV+TY TL++ K+ R GL
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G P+L TF I + + +A +L M + PD VTYN +I G CR
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ M R + PN Y +I C++G A+ + + K +P++ T
Sbjct: 450 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 509
Query: 365 SALLEGLKKNNQPCKANTIM 384
+++++G ++ K +
Sbjct: 510 NSIIKGYCRSGNVSKGQKFL 529
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG++ A+ +M GC V + N L L + R L + L E+ E+ +
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER-GVPP 399
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F +I +C G LDKA + M ++PD++TY TLI + + N LW
Sbjct: 400 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M + FPN T+++ I K + A + M GI P+ +TYN +IKG+CRS
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ +K M+ ++ P+ Y T+IH +E + A+ + K+ P V T
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579
Query: 365 SALLEGLKKNNQPCKANTI 383
+ L+ G + +A I
Sbjct: 580 NMLINGFSVHGNVQEAGWI 598
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 36/285 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG + AM M G K + + N+ LK L S E+ + F + D+
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDV 261
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE-------- 238
SF I+I FC +G +++A + EM+ G+KPD+++++ LI F + + +
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
Query: 239 ------IGNGLWNLMV----CK-----------------GCFPNLATFNVRIQHLVNKRR 271
+ +G+ MV C+ GC P++ T+N + L +RR
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A L+ M+ G+ PD T+ +I G+C G LD A +++ ML +RL P+ Y T
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I +C++GD + A + D + P+ T S L++ + Q
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 486
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 92/173 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I + CE G ++ A+ + EM G+ P+++TY ++I + + G M
Sbjct: 473 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 532
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ P+L T+N I + + + A KL+ +M++ ++PD VTYN++I GF G++
Sbjct: 533 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 592
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A ++ M + + P+R Y +MI+ G+ A+ + + +++ + P
Sbjct: 593 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ + ++ NI++ +C+ DK V+ EM+K V PDV+T+ ++ A ++ E
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + MV KG P + T+N ++ L +A ++ M FG+ PD ++ ++I GFC
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG--DFNLAYI 347
R G ++ A K+Y M R + P+ + +I + G D +AY+
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR----DLKAIQAFLMEVPEKFHI 182
+ G + A D + DMH R + + +L +S ++ FL E+ K I
Sbjct: 448 RQGDLDKANDLWDDMH----SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GI 502
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+I ++N +IK +C G + K + +M V PD+ITY TLI + K+++
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 562
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L N+M + P++ T+N+ I +A + M GIEPD TY +I G
Sbjct: 563 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 622
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRK 327
+G+ A +++ ML R P+ K
Sbjct: 623 TAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 62/135 (45%)
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
P + + L+ N T N+ + + + + ++ M++ + PD VT+N+
Sbjct: 137 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 196
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ R+G + A + +M+ + L P Y +++ LC+ G ++ A+ + K+
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256
Query: 357 WVPSVDTISALLEGL 371
P V + + L+ G
Sbjct: 257 VAPDVRSFTILIGGF 271
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 7/304 (2%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYG 145
+ +L A F I+ LL K RE + IM YG+AG+ A DM +Y
Sbjct: 118 IDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYS 177
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C+ T +S N L VL K + E+ K I +++F +V+KA C + +D A
Sbjct: 178 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK-GISPTVYTFGVVMKALCLVNEVDSA 236
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
++ +M + G P+ I Y TLI A K R L M+ GC P++ TFN I
Sbjct: 237 CALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHG 296
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L R +A KL+ M G P+ TY +++ G CR G +D A+ +L + PN
Sbjct: 297 LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR----MLLNKVPNPN 352
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
++ T+I+ G + A + +SM P + T + L+ GL K A +M
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412
Query: 385 ALVQ 388
+Q
Sbjct: 413 NEMQ 416
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 4/310 (1%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
N++ N F ++ R D + ++ H+ L G ++ G K G
Sbjct: 346 NKVPNPNVVLFNTLINGYVSRGRLDEAKAVM-HESMLSVGCGPDIFTYNTLILGLCKKGY 404
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + +M + GC+ V + + + L+ + L E+ K + + +N
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNAVGYN 463
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A C+ + A + +M G KPD+ T+ +LI K N+ E GL+ M+ +
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N T+N I + + +A KL+ M G D++TYN +IK CR+G+++
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M+ + L PN +I+ LC+ G+ A +D + + P + T ++L+ G
Sbjct: 584 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 643
Query: 371 LKKNNQPCKA 380
L K + +A
Sbjct: 644 LCKTGRAQEA 653
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 9/247 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAAL----KVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++ A++ F DM GCK + + N+ + KV L Q L+E + +
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-----GVIANT 529
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I AF G + +A ++ +M G D ITY LI A + E G L+
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG PN + N+ I L A + + M G+ PD VTYN +I G C++G
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A ++ + + P+ Y T+I + C+EG F+ A+++ + ++P+ T
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709
Query: 367 LLEGLKK 373
L+ K
Sbjct: 710 LVSNFIK 716
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++N +IKA C G ++K + +M G+ P+ I+ LI+ + +
Sbjct: 562 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 621
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P++ T+N I L R+ +A L +Q GI PD +TYN +I C+
Sbjct: 622 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 681
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G D A + S + +PN + ++ +EGD
Sbjct: 682 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 40/302 (13%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
P+ R +MR + + G + A F +M + TV + N + + +RDL A+
Sbjct: 184 PETRLFNVLMRDFV---RLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAV 239
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
E+ + ++ D++++ +IK FC G ++ A + EM+ GV P+ + +TTLI
Sbjct: 240 DGLYKEMSD-VGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLID 298
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
A K+ G L+ M +G P+L +N + L R A ++ M+ G++P
Sbjct: 299 AHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKP 358
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKV---------------YSAML------GR-------- 320
D+VTY +I G C+ G LDMA + Y+A++ GR
Sbjct: 359 DKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVL 418
Query: 321 ------RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
L P+ Y +I C++GD + + K+ K P V T + ++ GL K
Sbjct: 419 REMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKL 478
Query: 375 NQ 376
Q
Sbjct: 479 GQ 480
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 135/326 (41%), Gaps = 11/326 (3%)
Query: 58 RDPEKLFQLFKA----NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL---P 110
RD +L +L A + R V F +S + AR D ++ L + + P
Sbjct: 194 RDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKP 253
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
G +++ + + G +++A+ F +M G + + ++ A
Sbjct: 254 DVYTYGALIKG---FCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGM 310
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
++ + + D+ ++N ++ C L A ++ EM+ G+KPD +TYTTLI
Sbjct: 311 DLYQDMRVR-GVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDG 369
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
KD + ++ + M K + T+ I L R A +++ M +EPD
Sbjct: 370 CCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPD 429
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
TY +VI FCR G + K+ M + P Y +++ LC+ G A ++
Sbjct: 430 NTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLH 489
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQ 376
+ P T + LL+G K+ +
Sbjct: 490 AMLNIGVSPDDITYNILLDGQCKHGK 515
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 39/248 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + MD + DM + G + + NA + L +R+LKA ++ + E+ + ++ D
Sbjct: 302 KEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM-KNAGLKPDK 360
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--------- 237
++ +I C+ G LD A + +M + V D +TYT LIS K RP
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420
Query: 238 ------EIGNGLWNLMV---C-----------------KGCFPNLATFNVRIQHLVNKRR 271
E N + +++ C KG P + T+NV + L +
Sbjct: 421 MMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQ 480
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A+ L+ M G+ PD++TYN+++ G C+ G + ++++ S+ + ++P+ +Y +
Sbjct: 481 MKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTS 537
Query: 332 MIHYLCQE 339
+I L ++
Sbjct: 538 LISELAKK 545
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G I+ A+ + +M G K + S + + + + A+L E+ F +
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-RCFGLVP 268
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +VI FC G++ A V EM G PDV+TY TL++ K+ R GL
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G P+L TF I + + +A +L M + PD VTYN +I G CR
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ M R + PN Y +I C++G A+ + + K +P++ T
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 448
Query: 365 SALLEGLKKNNQPCKANTIM 384
+++++G ++ K +
Sbjct: 449 NSIIKGYCRSGNVSKGQKFL 468
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG++ A+ +M GC V + N L L + R L + L E+ E+ +
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER-GVPP 338
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F +I +C G LDKA + M ++PD++TY TLI + + N LW
Sbjct: 339 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 398
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M + FPN T+++ I K + A + M GI P+ +TYN +IKG+CRS
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 458
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ +K M+ ++ P+ Y T+IH +E + A+ + K+ P V T
Sbjct: 459 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518
Query: 365 SALLEGLKKNNQPCKANTI 383
+ L+ G + +A I
Sbjct: 519 NMLINGFSVHGNVQEAGWI 537
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 36/285 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG + AM M G K + + N+ LK L S E+ + F + D+
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDV 200
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE-------- 238
SF I+I FC +G +++A + EM+ G+KPD+++++ LI F + + +
Sbjct: 201 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 260
Query: 239 ------IGNGLWNLMV----CK-----------------GCFPNLATFNVRIQHLVNKRR 271
+ +G+ MV C+ GC P++ T+N + L +RR
Sbjct: 261 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A L+ M+ G+ PD T+ +I G+C G LD A +++ ML +RL P+ Y T
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I +C++GD + A + D + P+ T S L++ + Q
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 425
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ + ++ NI++ +C+ DK V+ EM+K V PDV+T+ ++ A ++ E
Sbjct: 92 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + MV KG P + T+N ++ L +A ++ M FG+ PD ++ ++I GFC
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG--DFNLAYI 347
R G ++ A K+Y M R + P+ + +I + G D +AY+
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 85/159 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I + CE G ++ A+ + EM G+ P+++TY ++I + + G M
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 471
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ P+L T+N I + + + A KL+ +M++ ++PD VTYN++I GF G++
Sbjct: 472 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 531
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
A ++ M + + P+R Y +MI+ G+ A+
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A +M G + + N+ +K S ++ Q FL ++ + D+ +
Sbjct: 424 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN-KVSPDLIT 482
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I + + + A+ ++ M+K V+PDV+TY LI+ F + ++ M
Sbjct: 483 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 542
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
KG P+ T+ I V S +A +L M + G E
Sbjct: 543 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 62/135 (45%)
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
P + + L+ N T N+ + + + + ++ M++ + PD VT+N+
Sbjct: 76 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 135
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ R+G + A + +M+ + L P Y +++ LC+ G ++ A+ + K+
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195
Query: 357 WVPSVDTISALLEGL 371
P V + + L+ G
Sbjct: 196 VAPDVRSFTILIGGF 210
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 8/238 (3%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
YG K ++ S N L L + + ++ E+ ++ I+ ++ SFNIV+ C++G L+
Sbjct: 114 YGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKR-KIELNVISFNIVVNGLCKVGKLN 172
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-----NGLWNLMVCKGCFPNLAT 258
+A V+ +M+ GV P+VITY TLI + K R IG + + MV KG PN T
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR--IGKMYKADAILKEMVAKGICPNEVT 230
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N+ I A ++ G MQR G+ P+ VTYN++I G C G +D A + M+
Sbjct: 231 YNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMV 290
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L PN + +I+ C+ N A + D K+ P+ T + L++ K+ +
Sbjct: 291 SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR 348
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 133/271 (49%), Gaps = 3/271 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ AM F +M G + V + N + L + A ++ ++ ++ + N
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS-DLEPNVVTHN 302
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I FC+ +++A + +M+K GV P+ +TYTTLI A+ KD R E L+N+M+ +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G FP ++T+N I L K A LM M + D VTYN++I C+ G A
Sbjct: 363 GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKA 422
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+ M + L P+ Y T++ C+EG+ A I+ +K +V T + L++G
Sbjct: 423 VKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKG 482
Query: 371 LKKNNQPCKANTIMALVQRR--VPHFSSNQL 399
+ AN ++ + R VP+ ++ ++
Sbjct: 483 FCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI---QAFLMEVPEKFHIQ 183
K G + A D DM ++G V + N + + + + A L E+ K I
Sbjct: 167 KVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAK-GIC 225
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ ++NI+I FC+ + A V EMQ+ G++P+V+TY LI+ D + + L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ MV PN+ T NV I + +A L M++ G++P+ +TY +I +C+
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ A +Y+ M+ R + P Y +I LC++GD A + + + K V T
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405
Query: 364 ISALLEGLKKNNQPCKA 380
+ L++ L K + KA
Sbjct: 406 YNILIDSLCKKGESRKA 422
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ +C G L A +V M++ G + +V+T+ LI F R E NGL N M
Sbjct: 440 TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499
Query: 248 VCKGCFPNLATFNVRIQHLVNK 269
+ +G PN T+ + + ++ K
Sbjct: 500 LERGLVPNRTTYEIIKEEMMEK 521
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 1/270 (0%)
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+M Y KAG IK A M GC V + + L + DL + L E+ K
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WK 907
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+Q +IF++N ++ C+ G +++A ++ E + G+ D +TYTTL+ A+ K +
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ M+ KG P + TFNV + KL+ M GI P+ T+N ++K
Sbjct: 968 AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+C +L A +Y M R + P+ K Y+ ++ C + A+ + ++ K +
Sbjct: 1028 QYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSV 1087
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQR 389
SV T S L++G K + +A I ++R
Sbjct: 1088 SVSTYSVLIKGFFKRKKFVEAREIFDQMRR 1117
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++A F E+ + I D+ ++ +I FC++G + +A + EM G++PD+IT+
Sbjct: 789 DIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T L++ + K + + N M+ GC PN+ T+ I L + AN+L+ M +
Sbjct: 848 TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G++P+ TYN ++ G C+SG+++ A K+ L + Y T++ C+ G+ +
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGL 371
A + + + K P++ T + L+ G
Sbjct: 968 AQEILTEMLGKGLQPTIVTFNVLMNGF 994
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--- 181
+ K G I+ A FY+MH V + A + + D+ +E + FH
Sbjct: 784 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM-------VEAGKLFHEML 836
Query: 182 ---IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
++ DI +F ++ +C+ G + A+ V M + G P+V+TYTTLI K+ +
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L + M G PN+ T+N + L +A KL+G + G+ D VTY ++
Sbjct: 897 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+C+SG +D A+++ + MLG+ L P + +++ C G + + K
Sbjct: 957 DAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1016
Query: 359 PSVDTISALLE 369
P+ T + L++
Sbjct: 1017 PNATTFNCLVK 1027
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 8/256 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM-EVPEKFHIQFDIF 187
GM+ A F M YG +V S N L L++ + A + E PE + +++
Sbjct: 612 GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPE-VGVCWNVA 670
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+NIVI C++G +++A+ +++ M+ G PDVI+Y+T+I+ + + + L M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG PN T+ I L + +A + M GI PD + Y ++ GFC+ G +
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K + M R + P+ Y +I CQ GD A + + + + P + T + L
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 368 LEGLKKNNQPCKANTI 383
+ G CKA I
Sbjct: 851 MNGY------CKAGHI 860
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A M L G V S + + +L + + ++ +K ++ + ++
Sbjct: 683 GRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK-GLKPNSYT 741
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C + L +A EM G+ PD I YTTL+ F K + + M
Sbjct: 742 YGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMH 801
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ P++ T+ I +A KL M G+EPD +T+ ++ G+C++GH+
Sbjct: 802 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIK 861
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V++ M+ PN Y T+I LC+EGD + A + + K P++ T ++++
Sbjct: 862 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 921
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
GL CK+ I V + V F + L+A
Sbjct: 922 NGL------CKSGNIEEAV-KLVGEFEAAGLNA 947
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 56/290 (19%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--------MEVPEKFHIQFDIFS- 188
F+D ++SL + + S+DLK Q+ + + V E F FD+
Sbjct: 530 FFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVY 589
Query: 189 -----------FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD-NR 236
F++ + E G+L +A V +M G+ V + ++ KD N+
Sbjct: 590 TYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNK 649
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
++ G N+A++N+ I + R +A+ L+ LM+ G PD ++Y+
Sbjct: 650 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYST 709
Query: 297 VIKGFCRSGHLDM-----------------------------------AKKVYSAMLGRR 321
VI G+CR G LD A++ +S M+G+
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++P+ +Y T++ C+ GD A + ++ P V T +A++ G
Sbjct: 770 ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 112/205 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+FNIVI C+ G L +A + V M+ +G PDV+TY +LI + K E L
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC ++ T+N I R +A G M+R G+ + VT++ + FC+
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A K+++ M R +MPN Y +++ C+ G + A ++ + + + VP+V T
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ +++GL K + +A+ +++L++R
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMER 403
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A F M GC V + N+ + + DL+ ++ + E+ K D+
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM-RKSGCAADV 270
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I F + G ++KAY EM++ GV +V+T++T + AF K+ + L+
Sbjct: 271 VTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQ 330
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G PN T+ + R A L+ M G+ P+ VTY +++ G C+ G
Sbjct: 331 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 390
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A V S M + N +Y T+IH + A + K V
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450
Query: 367 LLEGLKKNNQPCKANTIM 384
L+ GL K+ + +A +++
Sbjct: 451 LIWGLCKDQKVDEAKSLL 468
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 10/209 (4%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ ++ C+ G LD A +++ EM G+ P+V+TYT ++ K+ + + + +L
Sbjct: 341 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSL 400
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G N + I S +A L+ M+ G+E D Y +I G C+
Sbjct: 401 MERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQK 460
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D AK + M G L PN IY T++ L + G + A + + + P+V T A
Sbjct: 461 VDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCA 520
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFS 395
L++GL CKA +I + HF+
Sbjct: 521 LIDGL------CKAGSI----SEAISHFN 539
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 83/167 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D+ + +I C+ +D+A ++ +M G++P+ + YTT++ A +K +
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + ++ G PN+ T+ I L +A M+ G++P+ Y +I GF
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
C+ G L+ A + + M+ + + ++ +Y ++I ++ + A+ +
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 113 RREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
+R+G + ++ + K G+++ AM F M + G + + + ++ L
Sbjct: 297 KRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 356
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
L E+ + + ++ ++ +++ C+ G + +A V+ M++ GVK + + YTT
Sbjct: 357 DDAIVLLDEMVHQGLVP-NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415
Query: 227 LISAFYKDNRPE--------------------IGNGLWNLMVCK---------------G 251
LI + +N E G +W L CK G
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL--CKDQKVDEAKSLLHKMAG 473
Query: 252 CF--PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
C PN + + L + +A L+ + G +P+ VTY +I G C++G +
Sbjct: 474 CGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISE 533
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A ++ M L PN + Y +I C+ G N A + + + K ++L++
Sbjct: 534 AISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593
Query: 370 GLKK 373
G K
Sbjct: 594 GYMK 597
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +I C+ G + +A +M++LG+ P+V YT LI F K
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L N M+ KG + + I + + A L M G++ D Y I GFC
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+ A+ V S M+G + P++ +Y +I
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I FC++G L+KA +M EM G+ D + YT+LI + K + L
Sbjct: 549 NVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALK 608
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G +L + I N +A ++ M GI PD+ YN +I+ + +
Sbjct: 609 TKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKL 668
Query: 305 GHLDMAKKVYSAM 317
G+++ A + + M
Sbjct: 669 GNMEEASSLQNEM 681
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D++ + I FC M ++ +A V+ EM G+ PD Y LI + K E +
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEAS 675
Query: 242 GLWNLM 247
L N M
Sbjct: 676 SLQNEM 681
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 153/343 (44%), Gaps = 17/343 (4%)
Query: 31 SLNKFPNREP--LVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVS 88
+L K+P LVD+ L KL P+ L Q FK+ ++ +F+ +
Sbjct: 57 TLEKYPVEWTPNLVDRVL------KLLWNHGPKAL-QFFKSLDYHPTYAHVSSSFDHAID 109
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
R + + L++ ++ G I Y AG A+ F+ MH +GC +
Sbjct: 110 IAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQ 169
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ S N L VL +S+ ++ L +V F I++K F G L +A+
Sbjct: 170 DLNSFNTILDVLCKSKRVEMADNKLFKVFRG--------RFRILLKGFFRAGQLKEAWEF 221
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
++M+K + DV+TYTT++ F ++N M+ +G P++AT+N IQ L
Sbjct: 222 FLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCK 281
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
K A + M R G P+ TYN+VI+G C G ++ A + + M PN +I
Sbjct: 282 KDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQI 341
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y +I Y C + + + + +P++DT + L+ +
Sbjct: 342 YNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAM 384
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G AG ++ A F +M G +V + NA ++VL + +++ + E+ K ++
Sbjct: 244 FGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMP- 302
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N+VI+ C +G ++KA M M+ +P+V Y +I F E G ++
Sbjct: 303 NSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVF 362
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRS---WQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M C PNL T+N+ I + +++S A KL+ M G P + T+N V+ G
Sbjct: 363 EKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGL 422
Query: 302 CRSGHLDMAKKV 313
+G+ D AK++
Sbjct: 423 LLTGNQDFAKEI 434
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-NGLWNL 246
+F I+ + + G D+A + M + G D+ ++ T++ K R E+ N L+
Sbjct: 138 TFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFK- 196
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
V +G F L R L + +W+ M++ E D VTY V+ GF +G
Sbjct: 197 -VFRGRFRILLKGFFRAGQL---KEAWE---FFLQMKKRKCEIDVVTYTTVVHGFGVAGE 249
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A++V++ M+G ++P+ Y I LC++ + A + ++ ++K ++P+ T +
Sbjct: 250 VRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNV 309
Query: 367 LLEGLKKNNQPCKANTIMA 385
++ GL + KA MA
Sbjct: 310 VIRGLCHVGRMEKAMEFMA 328
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
++LG P T+ + + +P+ ++ M GC +L +FN + L +R
Sbjct: 130 RRLGPNPK--TFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRV 187
Query: 273 WQA-NKLMGLMQ-RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
A NKL + + RF I ++KGF R+G L A + + M R+ + Y
Sbjct: 188 EMADNKLFKVFRGRFRI---------LLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYT 238
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
T++H G+ A + + + + +PSV T +A ++ L CK + +
Sbjct: 239 TVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVL------CKKDNV------- 285
Query: 391 VPHFSSNQLSAFKSILSKS 409
N +S F+ +L K
Sbjct: 286 -----ENAISVFEEMLRKG 299
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 133/264 (50%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G + A DM GC V + ++ L L ++ L A L + + +I
Sbjct: 960 KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT-RSGCSPNI 1018
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C++G +D+AY ++ EM G +P+V+TYT L+ AF K + E GL +
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KG PNL T+N + K +A +L+ M + G P+ V+YN VI G C++
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + ML +P+ + T+I +C+ ++AY + + P++ T ++
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+ GL K+ + +A ++ + R+
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRK 1222
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 127/264 (48%), Gaps = 8/264 (3%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
++++G +AG I A + +M +G + V N +K L +R L + E+ E
Sbjct: 882 ILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEES 941
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
D+F+++ ++ + + G +D A ++ +M G P+V+TY++L+ K + +
Sbjct: 942 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDE 1001
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M GC PN+ T+N I R +A L+ M G +P+ VTY +++
Sbjct: 1002 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 1061
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
FC+ G + A + M+ + +PN Y +++ C++ + A + ++K VP
Sbjct: 1062 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 1121
Query: 360 SVDTISALLEGLKKNNQPCKANTI 383
+V + + ++ GL CKA +
Sbjct: 1122 NVVSYNTVIAGL------CKATKV 1139
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 121/240 (50%), Gaps = 4/240 (1%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VK 218
L + D+ L E+P + + ++ N+VIK C LD A + EM++ G
Sbjct: 887 LCRAGDIGTAYELLKEMP-RHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCP 945
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PDV TY+T++ + K + + L MV KGC PN+ T++ + L + +A L
Sbjct: 946 PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 1005
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ M R G P+ VTYN +I G C+ G +D A + M+ PN Y ++ C+
Sbjct: 1006 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 1065
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRR-VPHFSS 396
G A + + ++K +VP++ T ++LL+ K ++ +A ++ +++Q+ VP+ S
Sbjct: 1066 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ ++ K ++ A M GC V S N + L ++ + L+E
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE-GVLLLEQMLSN 1152
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ DI +FN +I A C+ +D AY + +Q+ G P+++TY +L+ K R +
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Query: 241 NGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M K GC P++ T+N I L +R +A KL M G+ PD+VTY++VI
Sbjct: 1213 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 1272
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C+ +D A V ML P Y T+I C+ G+ + A + + + K P
Sbjct: 1273 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 1332
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQR 389
V T S ++ L K + +A ++ + R
Sbjct: 1333 DVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 6/199 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I FC+ G L +A+ ++ +M + G +PDV +TLI A K + L
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + C P++ +++ I L +R +A + +M + PD VTYN V+ G C+S
Sbjct: 464 RMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKS 523
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++ M +MP+ Y +IH C++ + + A+ M + + VP V T
Sbjct: 524 RRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTY 583
Query: 365 SALLEGLKKNNQPCKANTI 383
SAL+ GL CKA T+
Sbjct: 584 SALINGL------CKAGTV 596
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + KAG ++ A D M GC+ V L+ + L ++ + + Q L+ +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE-LLRMSIGM 469
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D+ +++I+I A C+ L +A + M K PDV+TY +++ K R
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ M G P++ T+++ I A K++ M+ PD VTY+ +I G
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D A V+ MLG PN Y T+I LC+ A M + K++ P
Sbjct: 590 LCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPD 649
Query: 361 VDTISALLEGL 371
T + L+ GL
Sbjct: 650 SITYTCLINGL 660
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 6/285 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG I A + F +M+ G K + L+ L ++ E+ + D
Sbjct: 173 RAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDS 230
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + LD A ++ EM G P+V +Y T++ F K NR E N LW L
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE--NALWLL 288
Query: 247 --MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +GC P++ ++ I L + +A ++M M + G +P+ +TY ++ GFCR
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 348
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ M R PN Y ++H C+ D A+ + + ++ P
Sbjct: 349 GDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINY 408
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
S ++ G K + +A+ ++ + RR LS L K+
Sbjct: 409 STIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKA 453
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +I A C+ +D A ++ + PDV+ Y+ LI A K R
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++MV C+P++ T+N + L RR A L M+ G+ PD VTY++VI FC+
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+LD A K+ M + +P+ Y +I+ LC+ G + A+ + ++ + P++ T
Sbjct: 559 NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTY 618
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++GL K N+ +A ++ +++++
Sbjct: 619 NTLIDGLCKINKVEQAAEMLEIMRKQ 644
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC + + N + L +S+ + +A + FL + + + D +++IVI + C+ +D
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG--LAPDDVTYSIVISSLCKWRFMD 1281
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V+ M K G P ITY TLI F K + + L++ KG +P++ TF++ I
Sbjct: 1282 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 1341
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + R QA +L+ M R G+ PD VTYN ++KGFC + + A ++ M
Sbjct: 1342 DWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCE 1401
Query: 324 PNRKIYQTMIHYL 336
P+ Y T++ +L
Sbjct: 1402 PDNATYTTLVGHL 1414
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 3/207 (1%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLM-EVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
C V + N+ + L +SR + AFL+ + + D+ +++IVI +FC+ LD
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRIN--DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDS 563
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ ++ M++ PDV+TY+ LI+ K + ++ M+ GC PNL T+N I
Sbjct: 564 AFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLID 623
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + QA +++ +M++ PD +TY +I G C + L+ A +V M + +P
Sbjct: 624 GLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLP 683
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+R Y T++ L + + L + K+
Sbjct: 684 DRMTYGTLLRALQKTNNLELVEQLLKE 710
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ ++N ++ C+ D+A ++ EM +K G PD+ITY T+I K R + L
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ G P+ T+++ I L R +AN ++ LM + G +P +TY +I GFC+
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G+LD A ++ +L + P+ + I +L + G A + + ++ VP T
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371
Query: 364 ISALLEGL 371
+ LL+G
Sbjct: 1372 YNTLLKGF 1379
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I C+ G +DKA+ V EM G P+++TY TLI K N+ E +
Sbjct: 579 DVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEML 638
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + C P+ T+ I L N R +A +++ M+ G PD +TY +++ ++
Sbjct: 639 EIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKT 698
Query: 305 GHLDMAKKVYSAM 317
+L++ +++ M
Sbjct: 699 NNLELVEQLLKEM 711
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G D T L+ A + RP+ ++ +C C PN+ TF + I L A
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTA 896
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKIYQTMIH 334
+L+ M R G+ + + +N+VIKG C + LD A +++ M P+ Y T++
Sbjct: 897 YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHF 394
L + G + A + +D + K P+V T S+LL GL K K + AL+QR
Sbjct: 957 SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG---KLDEATALLQRMTRSG 1013
Query: 395 SSNQLSAFKSIL 406
S + + +I+
Sbjct: 1014 CSPNIVTYNTII 1025
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 99/251 (39%), Gaps = 40/251 (15%)
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM---VEMQK 214
KVL D A F + Q +IF N ++ + +A+ + +E Q
Sbjct: 98 KVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQW 157
Query: 215 LGVKPDVITYTTLISAFYKDNR-----------------------PEIGNGLWNLMVC-- 249
G D +TY+TLIS F + + I GL + C
Sbjct: 158 GG---DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSD 214
Query: 250 ---------KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
K C P+ T+N I L R A +L+ M G P+ +YN V+ G
Sbjct: 215 AVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG 274
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC++ ++ A + M+ R P+ Y T+I+ LC+ + A + +++ P+
Sbjct: 275 FCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334
Query: 361 VDTISALLEGL 371
V T L++G
Sbjct: 335 VITYGTLVDGF 345
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E +G + + C C N+ LV + QA+ L D VTY+ +
Sbjct: 117 ETRDGYQHEIFCCNCLLNV---------LVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTL 167
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I GF R+G + A +++ M + L + ++++++ LC G + A + ++ M K
Sbjct: 168 ISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTC 226
Query: 358 VPSVDTISALLEGLKKNNQ 376
P T + ++ GL K+++
Sbjct: 227 PPDSVTYNTMINGLSKSDR 245
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 107/183 (58%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++IVI AFC+ G+LD A ++ EM++ + PD+ TY+TLI A K ++ E L+ M+
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMI 275
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+PN+ TFN I L + + A ++M M G++PD +TYN++I G+ G +D
Sbjct: 276 HLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVD 335
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A++++ +M+ + + PN Y +I+ ++ + A +C++ +K PS+ T + LL
Sbjct: 336 RAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395
Query: 369 EGL 371
GL
Sbjct: 396 HGL 398
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V S + LK L + ++ + E+ K I F +IV+ + C M D + V
Sbjct: 71 SVVSFSKLLKALVHMKHYSSVVSLFREI-HKLRIPVHEFILSIVVNSCCLMHRTDLGFSV 129
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLV 267
+ K G+ + + + TL+ + +N+ + L+ +V + C PN + + L
Sbjct: 130 LAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLC 189
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
K + +A L+ LM++ +P+ Y++VI FC+ G LD A + + M + + P+
Sbjct: 190 KKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF 249
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y T+I LC+ + + + + N P+V T +++++GL K + A IM
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ +I S+NI+I + +D+A V E+ + G+KP ++T L+ ++ R +
Sbjct: 349 IEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M+ G P+L T + +A ++R + + Y VI G
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G LD A + + L P+ Y MI CQEG + A M + +
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADN 528
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
T + ++ G ++N+ + + + + F + + I+++
Sbjct: 529 RTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ + L + ++ + + + EK + D+ ++N++I + G +D+A +
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMRYMIEK-GVDPDVITYNMIIDGYGLRGQVDRAREIF 341
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M ++P++I+Y LI+ + + + + + + KG P++ T NV + L
Sbjct: 342 DSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFEL 401
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R+ A M G PD T+ ++ G+ ++G ++ A + + RR N +IY
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+I LC+ G + A+ + P V T +A++ G
Sbjct: 462 TAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 1/209 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG G + A + F M + + S N + + + E+ +K ++
Sbjct: 328 YGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQK-GLKP 386
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I + N+++ E+G A EM G PD+ T+ TL+ ++K+ E +
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + + N+ + I L + +A+ + G+ PD +TY +I G+C+
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
G LD AK + M + + + Y ++
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIV 535
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + I AM ++ G K ++ + N L L E K+ Q F E+ HI
Sbjct: 363 YARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP- 421
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+++ ++ + + G++++A ++++ ++ YT +I K+ + + + +
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G P++ T+ I + +A ++ M+ G D TYN++++GF RS
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541
Query: 305 GHLDMAKKVYSAMLGR 320
+ K + G+
Sbjct: 542 NKVSEMKAFLEEIAGK 557
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 129/257 (50%), Gaps = 3/257 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEK 179
+M GKAG + A++ +M G K V + NA + + DL ++A+ L++ ++
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL--VEAYNLLDEMKR 282
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ D+ +++ +I + LD+A V+ +M+K G PD ITY TLI+ K
Sbjct: 283 NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLND 342
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ M KGC P++ T++ I L R A L M+ GI+PD TY +I
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT 402
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
++G +D A +++S M G+ L P+ Y ++ L + G F A + +D + +P
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462
Query: 360 SVDTISALLEGLKKNNQ 376
V T ALL GL K +
Sbjct: 463 DVATYDALLLGLSKTKE 479
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+AG + A++ +M GCK + + N + L ++ L E+ + + D
Sbjct: 55 GRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVP-D 113
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I + G L +A+ + EM++ G PD TY +LI K R + L
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC P++ T++ I L + +A KL M+R G +PD +T+ ++ ++G
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTI 364
+D A ++ M R + P Y +I + GD AY + D MK+N P V T
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL-DEMKRNGCKPDVVTY 292
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
S L+ GL K +Q +A ++ +++
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKE 318
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 130/261 (49%), Gaps = 3/261 (1%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQF 184
GK G + AM+ +M +GC V + ++ + L +D + ++AF L + ++ +
Sbjct: 160 GKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL--GKDGETVKAFKLFQEMKRRGRKP 217
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +F ++ A + G +D A ++ EM++ GVKP V+TY LI+ F K L
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC P++ T++ I L+ + +A +++ M++ G PD +TYN +I G ++
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKA 337
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A +++ M + P+ Y T+I L + A ++ ++ P + T
Sbjct: 338 GLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY 397
Query: 365 SALLEGLKKNNQPCKANTIMA 385
+++ L K Q A+ + +
Sbjct: 398 CSIITVLGKAGQVDDADRLFS 418
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GKAG A+ +M GC V++ N + L ++ L E+ E+ + D
Sbjct: 90 GKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP-D 148
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
F++N +I ++G KA ++ EM++ G PDV+TY++LI+ KD L+
Sbjct: 149 TFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQ 208
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G P+ TF + L R A +L+ M+ G++P VTYN +I GF + G
Sbjct: 209 EMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVG 268
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L A + M P+ Y +I L + + A + K K+ P T +
Sbjct: 269 DLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328
Query: 366 ALLEGLKK 373
L+ GL K
Sbjct: 329 TLINGLGK 336
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N ++ A + G ++A L+ E++ PDV++Y+ LI++ + + E +
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC PNL T+N + L + +A +L+ M+ G PD TYN +I ++
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A +++ M R +P+ Y ++I+ L + G A + ++ + P V T
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
S+L+ GL K+ + KA + ++RR S +A L K+
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKA 232
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 1/275 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GKAG++ A F M GC V + + + L ++ +++ L E E IQ D
Sbjct: 335 GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVES-ACVLFEEMESVGIQPD 393
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F++ +I + G +D A + EM+ G+ PDVITY +++ + R + ++
Sbjct: 394 LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFE 453
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++AT++ + L + A L+ + G D + ++ ++ G
Sbjct: 454 DMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWG 513
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++D A ++ + L P Y +I L + G + A+ +D ++ P + + S
Sbjct: 514 NVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYS 573
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
+L+ L + Q A ++ + +R S S
Sbjct: 574 SLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYS 608
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ GKA ++ A F +M G + + + + + VL ++ + E+ K
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK- 423
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+ ++N + + G +A + +M++ G+ PDV TY L+ K +
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL ++ +GC + F+ ++ L + +A++L+ G+ P +YN +I
Sbjct: 484 CGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDA 543
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++G + A + + P+ Y ++I L Q G + A+ + ++ K+
Sbjct: 544 LAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ T+N + L + +A L ++ PD V+Y+ +I R+G + A +V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M + PN Y T++ L + G F+ A + + VP V T + L+ L K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 374 NNQPCKANTIMALVQRR--VPH-FSSNQL 399
+ +A T+ A ++ R VP F+ N L
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSL 155
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A+ + +GC+ + S NA LK L ++ ++ LM+ + +I
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE-LMDEMVRVDCAPNI 251
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ E+ N + N
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ +N ++ L + R +A +L+ M + D+VT+N+++ FC++G
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D ++ ML MP+ Y T+I+ C+EG + A ++ K P+ + +
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 367 LLEGLKKNNQPCKANTIMA-LVQRRVP 392
+L+GL + A +M+ ++Q+ P
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCP 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + K + L E+ +K D
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCPLDD 356
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M G PDVITYTT+I+ F K+ + L
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A +LM M + G P+ VT+N +I C+ G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++ A ++ ML P+ Y T+I L + G
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A++ +M GC + L+ S + ++E D +
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN-SVRVLEAMHAKGCTLDTGN 183
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N+V+ A CE G +D+A ++ ++ G + D+++Y ++ R L + MV
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ TFN I +L + ++++ M G PD Y +I G C+ GHL+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+A ++ + M L PN Y T++ LC
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCS 333
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 132/315 (41%), Gaps = 7/315 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R+ E LL QK P + I++ + + G++ +
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP---LDDVTFNILVDFFCQNGLVDRVI 376
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C G A +M +M + G P+ +T+ TLI+ K E L M+ GC P+
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ + Y+ + R G ++ +++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ + + A + +P+ T + L++GL
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615
Query: 376 QPCKANTIMALVQRR 390
+A +++ + R
Sbjct: 616 LAKEAQELLSELCSR 630
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 3/254 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + +++A+D F M YG V+S NA + + F E+ +++ I
Sbjct: 121 YAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREM-QRYRISP 179
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++ N+V+ AFC+ G L+KA V +M+ +G P + +Y TLI+ + G L
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM G P+ TFN I + +ANK+ M+ + P+ +TYN +I G+ +
Sbjct: 240 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 299
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ +M +++ ML + + Y +I LC EG A + K+ ++N VP+ T
Sbjct: 300 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 359
Query: 365 SALLEG--LKKNNQ 376
SAL+ G ++KN++
Sbjct: 360 SALITGQCVRKNSE 373
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 13/257 (5%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK------VLTESRDLKAIQAFLM 174
+M + K G ++ A++ F M G T+ S N + +L LK +
Sbjct: 187 VMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILM---- 242
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
EK ++ D +FN +I FC G L +A + EM+ V P+ ITY TLI+ + +
Sbjct: 243 ---EKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 299
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
E+G L + M+ G ++ T+N I L + R+ +A L+ + R + P+ T+
Sbjct: 300 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 359
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I G C + + A ++Y +M+ PN ++ +I C+ DF+ A + ++ +
Sbjct: 360 SALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSE 419
Query: 355 KNWVPSVDTISALLEGL 371
++ P DT+S L GL
Sbjct: 420 RSIAPDSDTLSELCRGL 436
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ DI ++N +I C G KA ++ E+ + + P+ T++ LI+ E
Sbjct: 317 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAF 376
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M+ GC PN TF + I A +++ M I PD T + + +G
Sbjct: 377 QLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGL 436
Query: 302 CRSGHLDMAKKVYSAMLGRRLMP 324
SG ++A K+ M + LMP
Sbjct: 437 WLSGKEELALKLCKEMEMKHLMP 459
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 131/265 (49%), Gaps = 2/265 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ D+ +GC+ V S NA LK L ++ +Q LME + +I +
Sbjct: 243 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE-LMEEMVRMACPPNIVT 301
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ E+ + + N M
Sbjct: 302 FNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMP 361
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N ++ L + R + +L+ M D+VT+N+++ FC++G +D
Sbjct: 362 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 421
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ ML MP+ Y T+I+ C+EG + A ++ K P+ + + +L
Sbjct: 422 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 481
Query: 369 EGLKKNNQPCKANTIMA-LVQRRVP 392
+GL + A +M+ ++Q+ P
Sbjct: 482 KGLCSAERWVDAEDLMSQMIQQGCP 506
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + + + L E+ +K D
Sbjct: 346 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK-DCPLDD 404
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M + G PDVITYTT+I+ F K+ + L
Sbjct: 405 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A LM M + G + +T+N +I C+ G
Sbjct: 465 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 524
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G + A + + K P+ S+
Sbjct: 525 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 584
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 585 IASALSREGR 594
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 7/213 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ---FD 185
G I A+ +M GC + L+ ++ + V E H + D
Sbjct: 173 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA----VRVLEDLHARGCALD 228
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N+V+ A C+ G +D+A ++ ++ G +PDV++Y ++ R L
Sbjct: 229 VGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME 288
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV C PN+ TFN I +L + ++++ M G PD Y +I G C+ G
Sbjct: 289 EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEG 348
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
HL++A ++ + M L PN Y T++ LC
Sbjct: 349 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +LEH G I ++ G K G+I A+ M GCK
Sbjct: 422 RVIELLEQMLEH------GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 475
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + + + ++ ++ + +FN +I C+ G++++A ++ +
Sbjct: 476 SYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLINFLCKKGLVEQAIELLKQ 534
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + + L N+MV KG PN ++ L + R
Sbjct: 535 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 594
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +Q I D V YN VI C+ G + A + + M+ +PN Y
Sbjct: 595 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 654
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 655 LIRGLASEG 663
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ V++A C G + A V+ EM + G P Y ++ A + +
Sbjct: 160 YTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLED 219
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +GC ++ N+ + + ++ +A L+ + FG EPD V+YN V+KG C +
Sbjct: 220 LHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKR 279
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+++ M+ PN + T+I YLC+ G F + + ++ P + +
Sbjct: 280 WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYAT 339
Query: 367 LLEGLKKNNQ 376
+++G+ K
Sbjct: 340 IIDGICKEGH 349
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 122/300 (40%), Gaps = 7/300 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R++ E LL K P + I++ + + G++ +
Sbjct: 368 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP---LDDVTFNILVDFFCQNGLVDRVI 424
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 483
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C A +M +M + G + IT+ TLI+ K E L M+ GC P+
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M G+ P+ + Y+ + R G ++ +++
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ G+ A + VP+ T + L+ GL
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 663
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G+++ A++ M + GC + S + + L ++ K +A L+ V + +
Sbjct: 521 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG--KTDEALELLNVMVNKGMSPN 578
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ + A G ++K + +Q ++ D + Y +IS+ K E
Sbjct: 579 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 638
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-----------LMQRFGI 287
MV GC PN +T+ + I+ L ++ +A +++ LM+ FGI
Sbjct: 639 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGI 691
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH----- 181
KAG K A+ +M GC + + N ++ L E R L + L E+ + +
Sbjct: 92 KAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 151
Query: 182 --------------------------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ D+ S+ VI C+ G LD A ++ +M
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNR 211
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PDV+TY++LI F K E GL + M+ GC PN+ +N + L +A
Sbjct: 212 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKA 271
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ M+R G PD V+YN I G C++ + AK V+ M+ R PN Y ++
Sbjct: 272 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++ + + A + + + +K + + + LL+GL K +
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L+ L S L+ + L + E + D +N +I + + +A+ + EM K
Sbjct: 17 LRGLCRSNQLEKARQLLGRMKEMGCVPDDAI-YNALISGYSKAKDFGQAFKFLAEMVKNH 75
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
P V+TYT ++ K R + L + M KGC PN+ T+NV ++ L +R+ +A
Sbjct: 76 CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 135
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
K++ M G PD VTYN IKG C+ +D A+K + M + P+ Y T+I+ L
Sbjct: 136 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGL 192
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
C+ GD + A M + P V T S+L++G K + +A M L+ +
Sbjct: 193 CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA---MGLLDSMLKLGCR 249
Query: 397 NQLSAFKSILS 407
+ A+ S+L
Sbjct: 250 PNMVAYNSLLG 260
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 6/274 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA A +M C TV + + L ++ K L E+ +K
Sbjct: 55 YSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDK-GCSP 113
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I+++N++++ CE LD+A ++ EM G PDV+TY + I K +R +
Sbjct: 114 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL 173
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M P++ ++ I L A++++ M G PD VTY+ +I GFC+
Sbjct: 174 ARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKG 230
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A + +ML PN Y +++ L + G A M + ++ + P V +
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPHFSS 396
+A ++GL K + KA + + R P+ SS
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 121/253 (47%), Gaps = 9/253 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A D +M G V S NA + L ++ +K +A + E+ +
Sbjct: 264 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER-GCTPNA 322
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN- 245
S++++++ C+ LD A ++ + ++ D++ YT L+ K R + L++
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKR---RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++ K C P++ +NV + +R ++ Q +K M ++R + VT+N+++ G C
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM--LERNCC--NVVTWNILVHGLC 438
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
L A+ + M+ +P+ Y T++ +C+ G A + ++++K VP V
Sbjct: 439 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 498
Query: 363 TISALLEGLKKNN 375
T SAL+ GL N
Sbjct: 499 TYSALITGLVHEN 511
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 11/256 (4%)
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYG------KAGMIKHAMDTFYDMHLYGCKRTVKSLN 154
H+ + + L + R GF ++ KA +K A F M GC S +
Sbjct: 267 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 326
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-- 212
++ L + ++L + + EK+ I DI + +++ C+ G D+A + ++
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQI-VDILLYTVLLDGLCKGGRFDEACALFSKVLD 385
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+K+ +PDV Y ++ + K + + + M+ + C N+ T+N+ + L R
Sbjct: 386 EKI-CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRL 443
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A ++ M G PD VTY ++ C+ G A +++ + +P+ Y +
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 503
Query: 333 IHYLCQEGDFNLAYIM 348
I L E AY++
Sbjct: 504 ITGLVHENMAEEAYLL 519
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ K C P+ TF + ++ L + +A +L+G M+ G PD+ YN +I G+ ++
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A K + M+ +P Y ++ LC+ G A + + K P++ T +
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 367 LLEGL 371
++EGL
Sbjct: 121 IVEGL 125
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ C L A +++ M G PD +TY TL+ A K + L+
Sbjct: 426 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 485
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
V GC P++ T++ I LV++ + +A L + D +N +I G+ +
Sbjct: 486 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF-------TKLDVALWNAMILGYAEN 538
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
G D+ K++ ++ + PN + + I
Sbjct: 539 GSGDLGLKLFVELIESDVEPNARTFGKEI 567
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 29/162 (17%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE------ 238
D ++ ++ A C+ G A + E K G PDV+TY+ LI+ +N E
Sbjct: 461 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 520
Query: 239 --IGNGLWNLMVC--------------------KGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+ LWN M+ PN TF I LV +A
Sbjct: 521 TKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKA 580
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
L + G PD N +I F + G L+ A++++ +M
Sbjct: 581 RGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G A+ F M GCK V + N + L + R + FL E+ + I D
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR-GIPPDAI 269
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD------------- 234
++N ++ C +G L++A + M++ G KPDV+TY +I + YKD
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329
Query: 235 ----------NRPEIGNGLWNL------------MVCKGCFPNLATFNVRIQHLVNKRRS 272
I +GL L M KGC P++ +N I L R
Sbjct: 330 VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLV 389
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A + + M GI P+ VTY+ ++ GFC G LD A +++ M+GR +MPN + +
Sbjct: 390 NDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSIL 449
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ LCQEG + A + + +K P++ T +AL+ G
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+ +FY M + ++ L + + + + +L + F + ++S N
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTV-VYLCNQMDLFGVTHTVYSLN 132
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I C + +D A V +M KLG++PDVIT+TTLI+ + + ++ L+N MV
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ ++N I L N + A + M++ G +P+ VTYN +I C+ ++ A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
S M+GR + P+ Y +++H LC G N A + K + P V T + +++
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312
Query: 371 LKKN 374
L K+
Sbjct: 313 LYKD 316
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 3/268 (1%)
Query: 111 QGRREGFIMRIMMLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
QG + +L+G G + A+ F M GCK V + N + L + R +
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVND 391
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
FL E+ ++ I + +++ ++ FC +G LD+A + EM V P+ +T++ L+
Sbjct: 392 AMEFLSEMVDR-GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
++ ++ M KG PN+ T+N + + + +A K+ +M G
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCA 510
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD +YN++I G+C S +D AK + + M ++L PN Y T++ LC G A +
Sbjct: 511 PDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQEL 570
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQ 376
K +P++ T S LL GL K+
Sbjct: 571 FKKMCSSGMLPTLMTYSILLNGLCKHGH 598
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M L+G TV SLN + L + + ++ K IQ D+ +F +I C G
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM-FKLGIQPDVITFTTLINGVCNEG 177
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + EM + G +PDVI+Y TLI+ + ++ M GC PN+ T+N
Sbjct: 178 KIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYN 237
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L R A + M GI PD +TYN ++ G C G L+ A +++ M
Sbjct: 238 TIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN 297
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ Y +I L ++ N A + + + P V T + +L GL
Sbjct: 298 GCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F M GCK V + N + L + R + FL E+ ++ I D+ +
Sbjct: 282 GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQ-GIPPDVVT 340
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ C +G L++A + +M++ G KPDV+ Y T+I + KD + MV
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV 400
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN T++ + N + +A +L M + P+ +T+++++ G C+ G +
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVS 460
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ V+ M + + PN Y +++ C N A + + + K P + + + L+
Sbjct: 461 EARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
G + + KA + L Q V + N ++
Sbjct: 521 NGYCNSRRMDKAKAL--LTQMSVKKLTPNTVT 550
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+N +I C G + A V +M++ G KP+V+TY T+I + KD
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+ T+N + L + +A +L M++ G +PD VTYN++I +
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A S M+ + + P+ Y T++H LC G N A + K +K P V
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376
Query: 365 SALLEGLKKNNQPCKANTIMA-LVQRRVP 392
+ +++ L K+ A ++ +V R +P
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIP 405
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV------LTESRDLKAIQAFLMEVPEKF 180
+ GM+ A F M G + + + NA + + E+R + I P
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAP--- 511
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D+ S+NI+I +C +DKA ++ +M + P+ +TY T++ R
Sbjct: 512 ----DLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M G P L T+++ + L +A KL M+ +EPD + Y ++I+G
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
G L++AK ++S + + P + Y MI L +EG + AY
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAY 673
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + S N + SR + +A L ++ K + + ++N ++K C +G L
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK-KLTPNTVTYNTIMKGLCYVGRLLD 566
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + +M G+ P ++TY+ L++ K + L+ M K P++ + + I+
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+ + A L + GI+P TYN++IKG + G D A +++
Sbjct: 627 GMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A+ + +GC+ + S NA LK L ++ ++ LM+ + +I
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE-LMDEMVRVDCAPNI 251
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ E+ N + N
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ +N ++ L + R +A +L+ M + D+VT+N+++ FC++G
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D ++ ML MP+ Y T+I+ C+EG + A ++ K P+ + +
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 367 LLEGLKKNNQPCKANTIMA-LVQRRVP 392
+L+GL + A +M+ ++Q+ P
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCP 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + K + L E+ +K D
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCPLDD 356
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M G PDVITYTT+I+ F K+ + L
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A +LM M + G P+ VT+N +I C+ G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G A + + K P+ S+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 537 IACALSREGR 546
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A++ +M GC + L+ S + ++E D +
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN-SVRVLEAMHAKGCTLDTGN 183
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N+V+ A CE G +D+A ++ ++ G + D+++Y ++ R L + MV
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ TFN I +L + ++++ M G PD Y +I G C+ GHL+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+A ++ + M L PN Y T++ LC
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCS 333
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 132/315 (41%), Gaps = 7/315 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R+ E LL QK P + I++ + + G++ +
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP---LDDVTFNILVDFFCQNGLVDRVI 376
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C G A +M +M + G P+ +T+ TLI+ K E L M+ GC P+
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ + Y+ + R G ++ +++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ + + A + +P+ T + L++GL
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615
Query: 376 QPCKANTIMALVQRR 390
+A +++ + R
Sbjct: 616 LAKEAQELLSELCSR 630
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 1/230 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M L+ V SLN + L + + L ++ K I D +FN +I C G
Sbjct: 119 MDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKM-FKLGIHPDAITFNALINGLCNEG 177
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ +A + EM K G +P+VI+YTT+I+ K + ++ M GC PN+ T++
Sbjct: 178 KIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYS 237
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L R A + + M GI P+ TYN ++ GFC G L+ A +++ M+GR
Sbjct: 238 TIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR 297
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+MPN + ++ LC+EG + A ++ + +K P + T +AL++G
Sbjct: 298 DVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDG 347
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A+D F M GCK V + + + L + R + FL E+ E+ I ++
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER-GIPPNV 268
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N ++ FC +G L++A + EM V P+ +T+T L+ K+ ++
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P+++T+N + +R +A K+ +M R G P +YN++I G+C+S
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D AK + + M + L P+ Y T++ LCQ G A + K+ P++ T
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448
Query: 367 LLEGLKKNNQ 376
LL+G K+
Sbjct: 449 LLDGFCKHGH 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 16/286 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-- 184
K GM+ A F M G + + + NA + D +Q + E + F I
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALM-------DGYCLQRLMNEAKKVFEIMIRK 367
Query: 185 ----DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
S+NI+I +C+ +D+A ++ EM + PD +TY+TL+ + RP+
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M G PNL T+ + + +A KL+ M+ +EP+ V Y ++I+G
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEG 487
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+G L++AK+++S + G P+ + Y MI L +EG + AY + + ++P+
Sbjct: 488 MFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + +++G +N ++T + L+ V S LS F+ +L
Sbjct: 548 SCSYNVMIQGFLQNQD---SSTAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 3/266 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIF 187
G IK A++ F +M G + V S + L ++ + A+ F + E+ + ++
Sbjct: 177 GKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVF--KKMEQNGCKPNVV 234
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I + C+ +++ A + EM + G+ P+V TY +++ F + L+ M
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V + PN TF + + L + +A + M G+EPD TYN ++ G+C +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ AKKV+ M+ + P Y +I+ C+ + A + + K P T S L
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPH 393
++GL + +P +A + + PH
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPH 440
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 85/155 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I++ FC+ G LD+A ++ M++ ++P+++ YT LI + + E+ L+
Sbjct: 442 NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELF 501
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + G P++ T+ V I+ L+ + S +A L M+ G P+ +YN++I+GF ++
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 561
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A ++ M+G+R N +Q ++ Q+
Sbjct: 562 QDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 148/336 (44%), Gaps = 16/336 (4%)
Query: 45 PLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL 103
P+ P L KL + D LF+ R I + + + + +L F I+ LL
Sbjct: 58 PITPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLL 117
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTE 162
+ K +E + IM YGKAG+ A DM +Y + T KS N L++L
Sbjct: 118 KQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVA 177
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
K ++ + I +++F +V+KAFC + +D A ++ +M K G P+ I
Sbjct: 178 GNCPKVAPNVFYDMLSR-GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSI 236
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
Y LI A ++NR L M GC P++ TFN I L R +A KL M
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRM 296
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
D + ++ G CR G +D A+ AML + PN +Y T+I+ G F
Sbjct: 297 LLRDFTADALIQGYLMHGLCRMGKVDEAR----AMLSKIPNPNTVLYNTLINGYVVSGRF 352
Query: 343 NLAYIMCKDSMKKNWV-----PSVDTISALLEGLKK 373
A KD + KN V P T + +++GL K
Sbjct: 353 EEA----KDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ + +N +I A C+ G + A + EM G KPD+ T+ +LI K+++ E
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ M+ +G N T+N I + QA+KL+G M+ G D +TYN +IK
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G + + M G + P+ +I+ C+ G N A +D +++ P +
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDI 617
Query: 362 DTISALLEGLKK 373
T ++L+ GL K
Sbjct: 618 VTYNSLINGLCK 629
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES---------------RDLKA---IQAF 172
+ AM +M L GC+ V++ N + L ++ RD A IQ +
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
LM C MG +D+A ++ ++ P+ + Y TLI+ +
Sbjct: 311 LMH-------------------GLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYV 347
Query: 233 KDNR-PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
R E + L+ MV G P+ TFN+ I L K A + + M + G EP+
Sbjct: 348 VSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+TY ++I GFC+ GH + A KV ++M + L N Y +I LC++G A M +
Sbjct: 408 ITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
K P + T ++L+ GL KN++
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDK 492
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I+ A+ + +M GCK + + N+ + L ++ ++ ++ + I +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA-NT 512
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I AF + ++ +A ++ EM+ G D ITY LI A K E GL
Sbjct: 513 VTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + FP++ + N+ I + A + + M + G+ PD VTYN +I G C+ G
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGR 632
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A +++ + + + P+ Y T+I C EG FN A + + ++P+ T S
Sbjct: 633 FQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSI 692
Query: 367 LLEGLKKNNQPCKANTIM 384
L+ KNN + TI+
Sbjct: 693 LINYFVKNNSDSEQFTIL 710
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FNI+I C+ G L A + EM K G +P+VITYT LI F K E + +
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M KG N +N I L + A ++ G M G +PD T+N +I G C++
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
++ A +Y ML ++ N Y T+IH
Sbjct: 491 DKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 142/281 (50%), Gaps = 5/281 (1%)
Query: 90 LAG-ARRFDYIEHLLEHQKSLP-QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
LAG R+FD HL++ KS + E F + ++ Y +AG+ A+ F M YGC
Sbjct: 160 LAGKVRQFDLAWHLIDLMKSRNVEISIETFTI-LIRRYVRAGLASEAVHCFNRMEDYGCV 218
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ + + L+ R Q+F + ++F + D+ + +++ +C G + +A
Sbjct: 219 PDQIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
V +M+ G++P+V TY+ +I A + + + ++ M+ GC PN TFN ++ V
Sbjct: 277 VFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R + ++ M++ G EPD +TYN +I+ CR +L+ A KV + M+ ++ N
Sbjct: 337 KAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNAS 396
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ T+ Y+ ++ D N A+ M M+ P+ T + L+
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I ++ D A+ ++ M+ V+ + T+T LI + + +N M
Sbjct: 154 YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
GC P+ F++ I +L KRR+ +A L RF EPD + Y +++G+CR+G +
Sbjct: 214 DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRAGEI 271
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+KV+ M + PN Y +I LC+ G + A+ + D + P+ T + L
Sbjct: 272 SEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 368 LEGLKKNNQPCK 379
+ K +P K
Sbjct: 332 MRVHVKAGRPEK 343
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 132/265 (49%), Gaps = 2/265 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ + +GC+ + S NA LK L ++ ++ LM+ + +I +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE-LMDEMVRVDCAPNIVT 253
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ E+ N + N M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N ++ L + R +A +L+ M + D+VT+N+++ FC++G +D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ ML MP+ Y T+I+ C+EG + A ++ K P+ + + +L
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 369 EGLKKNNQPCKANTIMA-LVQRRVP 392
+GL + A +M+ ++Q+ P
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCP 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + K + L E+ +K D
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCPLDD 356
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M G PDVITYTT+I+ F K+ + L
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A +LM M + G P+ VT+N +I C+ G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G A + + K P+ S+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 537 IACALSREGR 546
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A++ +M GC + L+ S + ++E D +
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN-SVRVLEAMHAKGCTLDTGN 183
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N+V+ A CE G +D+A ++ ++ G + D+++Y ++ R L + MV
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ TFN I +L + ++++ M G PD Y +I G C+ GHL+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+A ++ + M L PN Y T++ LC
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCS 333
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 132/315 (41%), Gaps = 7/315 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R+ E LL QK P + I++ + + G++ +
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP---LDDVTFNILVDFFCQNGLVDRVI 376
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C G A +M +M + G P+ +T+ TLI+ K E L M+ GC P+
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ + Y+ + R G ++ +++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ + + A + +P+ T + L++GL
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615
Query: 376 QPCKANTIMALVQRR 390
+A +++ + R
Sbjct: 616 LAKEAQELLSELCSR 630
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 132/265 (49%), Gaps = 2/265 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ + +GC+ + S NA LK L ++ ++ LM+ + +I +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEE-LMDEMVRVDCAPNIVT 253
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ E+ N + N M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N ++ L + R +A +L+ M + D+VT+N+++ FC++G +D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ ML MP+ Y T+I+ C+EG + A ++ K P+ + + +L
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 369 EGLKKNNQPCKANTIMA-LVQRRVP 392
+GL + A +M+ ++Q+ P
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCP 458
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + K + L E+ +K D
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK-DCPLDD 356
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M G PDVITYTT+I+ F K+ + L
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A +LM M + G P+ VT+N +I C+ G
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G A + + K P+ S+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 537 IACALSREGR 546
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A++ +M GC + L+ S + ++E D +
Sbjct: 125 GRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN-SVRVLEAMHAKGCTLDTGN 183
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N+V+ A CE G +D+A ++ ++ G + D+++Y ++ R L + MV
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV 243
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ TFN I +L + ++++ M G PD Y +I G C+ GHL+
Sbjct: 244 RVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+A ++ + M L PN Y T++ LC
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCS 333
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 132/315 (41%), Gaps = 7/315 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R+ E LL QK P + I++ + + G++ +
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP---LDDVTFNILVDFFCQNGLVDRVI 376
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKG 435
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C G A +M +M + G P+ +T+ TLI+ K E L M+ GC P+
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ + Y+ + R G ++ +++
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ + + A + +P+ T + L++GL
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615
Query: 376 QPCKANTIMALVQRR 390
+A +++ + R
Sbjct: 616 LAKEAQELLSELCSR 630
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A D M G K + + N + S ++A A L + + I+ D
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDS 291
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G L++A + EM + G++P + Y TLI F ++ + +
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDE 351
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P ++T+N I L ++R+ +A ++ +Q GI PD +TYN++I G+CR +
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A ++ ML + P +K Y +++H L ++ A + K + +P V +A
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNA 471
Query: 367 LLEG 370
L++G
Sbjct: 472 LIDG 475
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G T+ + N+ + L + + + E+ EK I D ++NI+I +C K
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK-GISPDAITYNILINGYCRCANAKK 414
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+L+ EM G+KP TYT+L+ K NR + + L+ + +G P++ FN I
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ A +L+ M R + PDEVT+N +++G CR G ++ A++++ M R + P
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + T+I + GD A+ + + + + P+V T +AL++GL KN +
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A + FY M G T+++ N+ L + + +A E+ + I+ +++FNI+
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM-FRLRIKSSVYTFNIM 227
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I C+ G L KA + M+ GVKP+++TY T++ + R E + + M +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+ I + + R +A+K+ M + G+ P V YN +I GFC G+LDMA
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
ML + + P Y ++IH L E + A M K+ +K P T + L+ G
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+ ++ I FL ++ + I F+ +IK+ C+M D+A+ M++ GV P +
Sbjct: 129 TNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIE 187
Query: 223 TYTTLISAFYKDNRPEIGNGLW---------------NLMV---CK-------------- 250
T +L+S F K NR E L+ N+M+ CK
Sbjct: 188 TCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM 247
Query: 251 ---GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN+ T+N + + R A+ ++ M+R IEPD TY +I G C+ G L
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A K++ M+ + L P+ IY T+I C +G+ ++A + +KK P++ T ++L
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ L + +A ++ +Q +
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEK 390
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + K A +M G K T K+ + L VL++ +K ++ + +
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLP 464
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ FN +I C + A+ ++ +M ++ V PD +T+ T++ ++ + E L+
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+ +FN I + A ++ M G P +TYN +++G C++
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
D+A+++ M+ + + P+ Y T+I
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIE 614
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
IM + + G ++ A + F +M G K S N + + D+K AF + E
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIK--DAFRVR-NEML 563
Query: 181 HIQFD--IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
F+ + ++N +++ C+ D A ++ EM G+ PD TY TLI K N P+
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K +K A++ + +M G V + + L ++ ++ + + FL+++ F +
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS-FGVVP 331
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF +N +I +C+ G L +A + E++K + PDV TY+ LI +R E +GL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG PN T+N I + +A ++ M GIEP+ +T++ +I G+C++
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A +Y+ M+ + L+P+ Y +I ++G+ A+ + K+ + P+V T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 365 SALLEGLKKNNQ 376
S L++GL K+ +
Sbjct: 512 SCLIDGLCKDGR 523
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 14/259 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG + A+ ++ + V + + +K L ++ L E+ +K +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP- 401
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I +C+ G ++KA V +M + G++P++IT++TLI + K + E GL+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KG P++ + I + +A +L MQ G+ P+ T + +I G C+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 305 GHLDMAKKVYSAMLG------------RRLM-PNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G + A K++ A G R L PN +Y +I LC +G A D
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581
Query: 352 SMKKNWVPSVDTISALLEG 370
P V T +++G
Sbjct: 582 MRCSGLRPDVFTCIVIIQG 600
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F I+I C+ + A +++M GV P++ Y LI + K L
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + P++ T+++ I+ L R +A+ L+ M++ G P+ VTYN +I G+C+
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+++ A +V S M + + PN + T+I C+ G A + + + K +P V
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 365 SALLEGLKKNNQPCKA 380
+AL++G K+ +A
Sbjct: 477 TALIDGHFKDGNTKEA 492
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N+V+ + G D + V +M G P+V+TY TLI + L++ M+
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K FP + + + I+ L + R +A + M+ G+ P+ TYN ++ G+C+ H+
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A ++Y MLG L+PN + +I LC+ + A D VP++ + L++
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 370 GLKKNNQPCKANTIMALVQR 389
G K +A ++ + +++
Sbjct: 342 GYCKAGNLSEALSLHSEIEK 361
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPE 178
M+L G K G + DM G V + + D LKA + F + +
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I++ I+I+ C + +A + M+ G+ P++ TY T++ + K +
Sbjct: 223 KIFPTVVIYT--ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L+ M+ G PN+ TF + I L A K + M FG+ P+ YN +I
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C++G+L A ++S + ++P+ Y +I LC A + ++ KK ++
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P+ T + L++G K KA
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKA 422
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F ++I AF EMG++++A V +M L P + ++ K R + ++ MV
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ T+ I + +A +L M I P V Y ++I+G C +
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ ++ M ++PN Y TM+ C+ A + + + +P+V T L+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305
Query: 369 EGLKKNNQ 376
+GL K ++
Sbjct: 306 DGLCKTDE 313
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 126/300 (42%), Gaps = 30/300 (10%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML------YGKAG 129
++ + + + + L G R + + LL+ K ++GF+ + Y K G
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMK------KKGFLPNAVTYNTLIDGYCKEG 417
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ A++ M G + + + + + ++ ++A E+ K + D+ ++
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP-DVVAY 476
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I + G +A+ + EMQ+ G+ P+V T + LI KD R I + + +
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR--ISDAIKLFLAK 534
Query: 250 KG---------------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
G C PN + IQ L R ++A+K M+ G+ PD T
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
++I+G R+ HL + + +L ++PN +Y+ + + G A C + ++
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ 654
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 3/258 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F ++ YGKAG+ + ++ F M G +V + N+ L +L + Q+ E+
Sbjct: 158 FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ + D ++FNI+I+ FC+ ++D+ + EM + PD++TY TL+ + +
Sbjct: 218 LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277
Query: 237 PEIGNGLWNLMVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
I + + N MV K P++ T+ ++ K +A + M G++P+E+TY
Sbjct: 278 VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337
Query: 295 NLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
N +IKG C +D K+++ L G +P+ T+++ C G+ N A + + M
Sbjct: 338 NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397
Query: 354 KKNWVPSVDTISALLEGL 371
N P T S L+ L
Sbjct: 398 VLNVRPDSATYSVLIRNL 415
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ F +M G K + N +K L E + + I+ D + N
Sbjct: 315 IDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLN 374
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN----- 245
++ A C G L+ A V +M L V+PD TY+ LI + E L++
Sbjct: 375 TLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEK 434
Query: 246 --LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
L+ GC P +A + + L ++ +A ++ + + G + D +++ ++IKG CR
Sbjct: 435 EILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCR 493
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + ++ ML R +P+ + YQ++I L Q+G+ +AY + +K + VP T
Sbjct: 494 EGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETST 553
Query: 364 ISALL 368
++L
Sbjct: 554 FHSIL 558
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D SF I+IK C G + Y ++V M + PD+ TY +LI + P +
Sbjct: 480 DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTL 539
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ P +TF+ + L+ K + ++ + + LM I + ++ S
Sbjct: 540 EKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGS 599
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A K+ + + + + +I +L F LA+ + ++K+ +D
Sbjct: 600 GLRDKAFKIVGLLYANGYVVD---MEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMC 656
Query: 365 SALLEGL------------------KKNNQP--CKANTIMALVQR 389
++EGL K NNQP C N +AL R
Sbjct: 657 DTVIEGLCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVALEAR 701
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 134/269 (49%), Gaps = 4/269 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ AG + AMD M GC V + A + ++ L+ L E+ E+
Sbjct: 153 IITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER- 208
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ ++N+++ A C++ ++ A V+ +M + G P+V+T+ +L+ F K +
Sbjct: 209 GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA 268
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L +MV KG PN+ T++ I L ++ +A +++ M+ G+ PD TY+ +I G
Sbjct: 269 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHG 328
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++ ++ A+++ M G P+ +Y ++IH C+ G A ++ K+ P
Sbjct: 329 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR 389
V T + +++GL K + +A I+ +Q
Sbjct: 389 VVTYNTVIDGLCKLGKIAEAQVILEQMQE 417
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 6/265 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + + L +++F + +LE K+ +G +++G KA I+ A
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKT--RGVTPDAFTYSALIHGLCKADKIEEAEQ 340
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
M GC V ++ + +S L Q L E+ K D+ ++N VI
Sbjct: 341 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM-RKQRKSPDVVTYNTVIDGL 399
Query: 197 CEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C++G + +A +++ +MQ+ G V PDV+TY+T+I+ K + L + M GC P+
Sbjct: 400 CKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 459
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T+ I L R +A L+ M+R G P+ VTY +I G C++ +D A++V
Sbjct: 460 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEG 340
M PN Y TM++ LC G
Sbjct: 520 EMRNAGCPPNLVTYNTMVNGLCVSG 544
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 2/266 (0%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
R V + + + + L A + + E +L I+ + K+G +
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A T +M V + N + L + + Q L ++ E + D+ +++ V
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I C+ +L +A ++ M K G PDV+TYTT+I K R E L M GC
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN+ T+ I L R+ +A ++M M+ G P+ VTYN ++ G C SG + A++
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 551
Query: 313 VYSAMLGRR--LMPNRKIYQTMIHYL 336
+ M R P+ Y+T+++ L
Sbjct: 552 LVQRMKDGRAECSPDAATYRTIVNAL 577
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 3/206 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+NIVI FC G L A ++ EM+ G PD T+T +I+A N ++ +G
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMA--NAGDL-DGAM 167
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + GC PN+ T+ I ++ +A KL+ M+ G P+ VTYN+++ C+
Sbjct: 168 DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+ V M+ PN + +++ C+ G+ + A + + K P+V T
Sbjct: 228 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
SAL++GL K+ + +A ++ ++ R
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTR 313
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 123/298 (41%), Gaps = 41/298 (13%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A D F L C+ V S N + + DL A L E+ + D F+
Sbjct: 94 REAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM-KSAGFAPDAFTHTP 152
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I A G LD A M ++ +G P+V+TYT LI+AF + + E L M +G
Sbjct: 153 IITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 209
Query: 252 CFPNLATFNVRIQHLVN----------------------------------KRRSWQ-AN 276
C PNL T+NV + L KR + A
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 269
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
KL+G+M G+ P+ VTY+ +I G C+S AK+V M R + P+ Y +IH L
Sbjct: 270 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGL 329
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV--QRRVP 392
C+ A M + P V S+++ K+ + +A + + QR+ P
Sbjct: 330 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 387
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 2/261 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A M G + V + +A + L +S+ + L E+ + +
Sbjct: 259 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR-GVTP 317
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+++ +I C+ +++A ++ M G PDV+ Y+++I AF K +
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCR 303
M + P++ T+N I L + +A ++ MQ G + PD VTY+ VI G C+
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK 437
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
S L A+K+ M P+ Y T+I LC+ G A + + + P+V T
Sbjct: 438 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 497
Query: 364 ISALLEGLKKNNQPCKANTIM 384
+ L+ GL K + +A +M
Sbjct: 498 YTTLISGLCKARKVDEAERVM 518
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ +I AFC+ G L +A + EM+K PDV+TY T+I K + +
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412
Query: 245 NLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G P++ T++ I L +A KL+ M + G PD VTY +I G C+
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G L+ A+ + M PN Y T+I LC+ + A + ++ P++ T
Sbjct: 473 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532
Query: 364 ISALLEGL 371
+ ++ GL
Sbjct: 533 YNTMVNGL 540
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 168/384 (43%), Gaps = 33/384 (8%)
Query: 31 SLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRL 90
++N N + ++ E L KLK E + FK+ A++ + + RL
Sbjct: 24 TINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRL 83
Query: 91 AGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTV 150
R D I++LL+ K E + ++ Y +AG+ + A+ TFY + +GCK +V
Sbjct: 84 GYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSV 143
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K N L L + I + ++ I+ +++++N+++KA C+ +D A ++
Sbjct: 144 KIYNHVLDALLSENKFQMINGIYNNM-KRDGIELNVYTYNMLLKALCKNDRVDAARKLLA 202
Query: 211 EMQKLGVKPDVITYTT------------------------------LISAFYKDNRPEIG 240
EM G PD ++YTT LI+ F ++++ E
Sbjct: 203 EMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEV 262
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+N M +G P++ T++ I L A ++ M G P+ T+ ++KG
Sbjct: 263 FELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKG 322
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-P 359
+ G L A +++ M+ PN Y T+IH LC G + + M++N V P
Sbjct: 323 YFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM-VEAVSVSQKMERNGVFP 381
Query: 360 SVDTISALLEGLKKNNQPCKANTI 383
+ T S L++G K A+ I
Sbjct: 382 NETTYSTLIDGFAKAGDLVGASEI 405
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D+ +++ VI EMG ++ A V+ +M G P+V T+T+L+ ++ R
Sbjct: 274 IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEAL 333
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LWN M+ +G PN +N I L + + +A + M+R G+ P+E TY+ +I GF
Sbjct: 334 DLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGF 393
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++G L A ++++ M+ +PN +Y M+ LC+ FN A + ++ N P+
Sbjct: 394 AKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNT 453
Query: 362 DTISALLEGL 371
T + ++GL
Sbjct: 454 ITFNTFIKGL 463
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + ++ C + + A ++ M P+ IT+ T I + E +
Sbjct: 417 NVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVL 476
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M GC PN+ T+N + L N +R+ +A +++G ++ I+ + VTYN ++ GFC +
Sbjct: 477 NQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHA 536
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN-WVPSVDT 363
G A ++ +L P+ Y T+I+ C++G+ A + KK P V T
Sbjct: 537 GMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFT 596
Query: 364 ISALLEGL 371
++LL G+
Sbjct: 597 YTSLLWGV 604
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
K T + +K L RD+ IQ +L+++ + I + F IVI A+ G+ ++A
Sbjct: 70 KHTPLTYTTMIKRLGYERDIDGIQ-YLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+ + G KP V Y ++ A +N+ ++ NG++N M G N+ T+N+ ++ L
Sbjct: 129 KTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKAL 188
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK----------VYSA 316
R A KL+ M G PD V+Y V+ CR G ++ A++ VY+A
Sbjct: 189 CKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNA 248
Query: 317 MLG--------------------RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ + P+ Y T+I+ L + G+ +A + +
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
P+V T ++L++G + C+A + L R + S A+ +++
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEA---LDLWNRMIQEGSEPNTVAYNTLI 355
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A+ M L GC V + + +K R +A+ + + E + +
Sbjct: 292 GNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGS--EPNTV 349
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C G + +A V +M++ GV P+ TY+TLI F K + +WN M
Sbjct: 350 AYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM 409
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ GC PN+ + + L A L+ M P+ +T+N IKG C SG
Sbjct: 410 ITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKT 469
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ A KV + M PN Y ++ L
Sbjct: 470 EWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G + AM M YGC V + N L L ++ + + E+ E+ I+ ++
Sbjct: 466 SGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI-EEMEIKSNLV 524
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ FC G+ A + ++ G KPD ITY T+I A+ K + L + +
Sbjct: 525 TYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRL 584
Query: 248 VCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG-FCRSG 305
KG +P++ T+ + + N +A + M GI P+ T+N +++G F + G
Sbjct: 585 TKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLG 644
Query: 306 HL 307
HL
Sbjct: 645 HL 646
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A + FY M G T+++ N+ L + + +A E+ + I+ +++FNI+
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM-FRLRIKSSVYTFNIM 227
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I C+ G L KA + M+ GVKP+++TY T++ + R E + + M +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+ I + + R +A+K+ M + G+ P V YN +I GFC G+LDMA
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
ML + + P Y ++IH L E + A M K+ +K P T + L+ G
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G T+ + N+ + L + + + E+ EK I D ++NI+I +C K
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK-GISPDAITYNILINGYCRCANAKK 414
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+L+ EM G+KP TYT+L+ K NR + + L+ + +G P+ FN I
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ A +L+ M R + PDEVT+N +++G CR G ++ A++++ M R + P
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKP 534
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + T+I + GD A+ + + + + P+V T +AL++GL KN +
Sbjct: 535 DHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A D M G K + + N + S ++A A L + + I+ D
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDS 291
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G L++A + EM + G++P + Y TLI F ++ + +
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDE 351
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P ++T+N I L ++R+ +A ++ +Q GI PD +TYN++I G+CR +
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A ++ ML + P +K Y +++H L ++ A + K + +P +A
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNA 471
Query: 367 LLEG 370
L++G
Sbjct: 472 LIDG 475
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 36/263 (13%)
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+ ++ I FL ++ + I F+ +IK+ C+M D+A+ M++ GV P +
Sbjct: 129 TNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIE 187
Query: 223 TYTTLISAFYKDNRPEIGNGLW---------------NLMV---CK-------------- 250
T +L+S F K NR E L+ N+M+ CK
Sbjct: 188 TCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM 247
Query: 251 ---GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN+ T+N + + R A+ ++ M+R IEPD TY +I G C+ G L
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A K++ M+ + L P+ IY T+I C +G+ ++A + +KK P++ T ++L
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ L + +A ++ +Q +
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEK 390
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + K A +M G K T K+ + L VL++ +K ++ + +
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLP 464
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FN +I C + A+ ++ +M ++ V PD +T+ T++ ++ + E L+
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+ +FN I + A ++ M G P +TYN +++G C++
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
D+A+++ M+ + + P+ Y T+I
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIE 614
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
IM + + G ++ A + F +M G K S N + + D+K AF + E
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIK--DAFRVR-NEML 563
Query: 181 HIQFD--IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
F+ + ++N +++ C+ D A ++ EM G+ PD TY TLI K N P+
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPD 623
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K +K A++ + +M G V + + L ++ ++ + + FL+++ F +
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS-FGVVP 331
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF +N +I +C+ G L +A + E++K + PDV TY+ LI +R E +GL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG PN T+N I + +A ++ M GIEP+ +T++ +I G+C++
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A +Y+ M+ + L+P+ Y +I ++G+ A+ + K+ + P+V T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 365 SALLEGLKKNNQ 376
S L++GL K+ +
Sbjct: 512 SCLIDGLCKDGR 523
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG + A+ ++ + V + + +K L ++ L E+ +K +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP- 401
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I +C+ G ++KA V +M + G++P++IT++TLI + K + E GL+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KG P++ + I + +A +L MQ G+ P+ T + +I G C+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 305 GHLDMAKKVYSAMLG 319
G + A K++ A G
Sbjct: 522 GRISDAIKLFLAKTG 536
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N+V+ + G D + V +M G P+V+TY TLI + L++ M+
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K FP + + + I+ L + R +A + M+ G+ P+ TYN ++ G+C+ H+
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A ++Y MLG L+PN + +I LC+ + A D VP++ + L++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 370 GLKKNNQPCKANTIMALVQR 389
G K +A ++ + +++
Sbjct: 342 GYCKAGNLSEALSLHSEIEK 361
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPE 178
M+L G K G + DM G V + + D LKA + F + +
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I++ I+I+ C + +A + M+ G+ P++ TY T++ + K +
Sbjct: 223 KIFPTVVIYT--ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L+ M+ G PN+ TF + I L A K + M FG+ P+ YN +I
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C++G+L A ++S + ++P+ Y +I LC A + ++ KK ++
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P+ T + L++G K KA
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKA 422
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F ++I AF EMG++++A V +M L P + ++ K R + ++ MV
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ T+ I + +A +L M I P V Y ++I+G C +
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ ++ M ++PN Y TM+ C+ A + ++ + +P+V T L+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305
Query: 369 EGLKKNNQ 376
+GL K ++
Sbjct: 306 DGLCKTDE 313
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 5/204 (2%)
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
HL+ + KS N LK +S + + F + K D FS +KA
Sbjct: 588 HLHTHLKPPKS-NQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSS 646
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
L + + + G +P + T+LIS + + +++ + K NL ++
Sbjct: 647 LVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTS 702
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I V+ +R +A +L MQ ++PD VT + + G LDM + +++ + R
Sbjct: 703 VISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRG 762
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLA 345
L + + ++I+ + G+ A
Sbjct: 763 LDTDLCLNNSLINMYSKCGEIGTA 786
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V + NA L L+++ A + F + + + +++++NI+I+A C G +A +
Sbjct: 115 SVLAYNAVLLALSDASLTSARRFFDSMLSDG--VAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M+ G P+V+TY TL++AF++ + L +M+ G PNL TFN + +
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ A K+ M R G+ PD V+YN ++ G+C++G A V++ M + +MP+
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++IH +C+ G+ A + + ++ + T +AL++G K
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCK 337
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG A+ F +M G V + + + V+ ++ +L+ + ++ E+ +Q
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRER-GLQM 323
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +F +I FC+ G LD A L + M++ +KP V+ Y LI+ + R + L
Sbjct: 324 NEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELL 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG P++ T++ I + A +L M G+ PD +TY+ +I+ C
Sbjct: 384 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEE 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M+ L P+ Y ++I C+EG+ A + +K +P V T
Sbjct: 444 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTY 503
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K+ + +A ++
Sbjct: 504 SVLINGLSKSARAMEAQQLL 523
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 16/275 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A + ++M G K V + + + ++ D + ++ EK +
Sbjct: 370 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK-GVLP 428
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CE L A+++ M KLG++PD TYT+LI K+ E L
Sbjct: 429 DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLH 488
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ MV G P++ T++V I L R+ +A +L+ + P Y+ +
Sbjct: 489 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKA 548
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGFC G ++ A KVY +ML R + +Y +IH C+ G+ A
Sbjct: 549 ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 608
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K +++ + P+ + +L+ GL +N +A+ ++
Sbjct: 609 KQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVI 643
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N V+ A + L A M GV P+V TY LI A + +
Sbjct: 116 VLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILR 174
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC PN+ T+N + A +L+G+M G++P+ VT+N ++ G C++G
Sbjct: 175 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAG 234
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A+KV+ M+ L P+ Y T++ C+ G + A + + +K +P V T +
Sbjct: 235 KMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 294
Query: 366 ALLEGLKKNNQPCKANTI 383
+L+ + CKA +
Sbjct: 295 SLIHVM------CKAGNL 306
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 93/186 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N ++ AF G +D A ++ M G+KP+++T+ ++++ K + E ++
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P+ ++N + S +A + M + GI PD VT+ +I C++
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L+ A + M R L N + +I C++G + A + + + PSV
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCY 363
Query: 365 SALLEG 370
+AL+ G
Sbjct: 364 NALING 369
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G P V+ Y ++ A D ++ M+ G PN+ T+N+ I+ L + +A
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ M+ G P+ VTYN ++ F R+G +D A+++ ML L PN + +M++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+C+ G A + + M++ P + + L+ G K +A ++ A
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFA 279
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 7/294 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ + +L F I+ LL K +E + IM Y KAG +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 142 -HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
++Y C+ T KS N L++L K ++ + I +F+F +V+KAFC +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVN 231
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+D A ++ +M K G P+ + Y TLI + K NR L M GC P+ TFN
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L R +A K++ M G PD++TY ++ G C+ G +D AK ++ R
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY----R 347
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTISALLEGLKK 373
P I+ T+IH G + A + D + VP V T ++L+ G K
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 77/294 (26%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G++ A++ +DM GCK V
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNV---------------------------------- 424
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-------- 236
+S+ I++ FC++G +D+AY V+ EM G+KP+ + + LISAF K++R
Sbjct: 425 --YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 237 -------------------------PEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNK 269
EI + LW L M+ +G N T+N I + +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A KL+ M G DE+TYN +IKG CR+G +D A+ ++ ML P+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+I+ LC+ G A K+ + + P + T ++L+ GL C+A I
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL------CRAGRI 650
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 7/274 (2%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
P G++M + K G + A D FY + K + N + L
Sbjct: 320 PDDITYGYLMNGLC---KIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDA 372
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+A L ++ + I D+ ++N +I + + G++ A V+ +M+ G KP+V +YT L+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K + + + N M G PN FN I + R +A ++ M R G +P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D T+N +I G C + A + M+ ++ N Y T+I+ + G+ A +
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + T ++L++GL + + KA ++
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A D F ++ G ++K+ N ++ L L + E+ + + D+++
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++IKA C G +D A++++ E+++ G++P V+TY L+ A + R E L MV
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P++ TF + I L +R + + ++ M+ FGI P+EV YN +I CR GH
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
A +++ M+ + + Y + LC+EG+ A
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHA 375
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+FN ++A+C +G ++ ++ +M+ G+KPD++TY T+I + K N
Sbjct: 531 DLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYL 590
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN--------- 295
++ G PN +N I A ++ M+ GI+P +TYN
Sbjct: 591 IELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHA 650
Query: 296 --------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++I+GFC+ G +D A + M R + PN+ Y
Sbjct: 651 GLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTY 710
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
T+++ C+ G+ A+ + + + VP + + L+ G
Sbjct: 711 TTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISG 751
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 127/284 (44%), Gaps = 1/284 (0%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
L G R D + L+ + + + + K G + A + ++ + G
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
+ + NA + L + ++K L + + ++FD ++NI+I+ C+ +++A +
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDS-GVEFDRITYNIMIQFCCKASKMEEAIQLR 520
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M K G KPD+ T+ T + A+ + E L + M +G P++ T+ I
Sbjct: 521 DDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKA 580
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ +ANK + + + G+ P+ V YN +I G+ R+G + A V M + P Y
Sbjct: 581 KDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITY 640
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++++++C G A + + KN V + +++G K
Sbjct: 641 NSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCK 684
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I + NI+++A G LD A V EM+ V PDV TYT +I A + + +
Sbjct: 180 IKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVML 239
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G P + T+NV + L R +A +L G M + P VT+ ++I G R
Sbjct: 240 AELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARG 299
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
V M G + PN IY +I + C+EG + A + + + K +V T
Sbjct: 300 QRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTY 359
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ + + L K + A I+
Sbjct: 360 NLIAKALCKEGEMEHAEQIL 379
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 135/352 (38%), Gaps = 38/352 (10%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
E+ FQL R+ + F ++ LA +RF ++ +L+ + E +
Sbjct: 268 EEAFQLKGRMVEGRLR-PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQ 326
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME-VPEK 179
++ + + G A+ F +M G K+TV + N K L + +++ + L E +
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAG 386
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ +F+ ++V G LD ++ EM +KP+ T I K + E
Sbjct: 387 MTVHCSLFN-SVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEE 445
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE----------- 288
+W L++ KG N+AT N I L +A K++ M G+E
Sbjct: 446 AAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQ 505
Query: 289 ------------------------PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
PD T+N ++ +C G ++ + M L P
Sbjct: 506 FCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKP 565
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ Y T+I C+ D + A + +K P+ +AL+ G +N
Sbjct: 566 DIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGS 617
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG+ G I A+ M G + T + N+ + + + ++ + + K +I+
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILK-NIEL 670
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ + I+I+ FC++G +D+A + EM ++P+ +TYTTL+ A+ K E L+
Sbjct: 671 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLF 730
Query: 245 NLMVCKGCFPNLATFNVRIQ 264
+ MV G P+ ++N I
Sbjct: 731 DEMVSSGIVPDTVSYNTLIS 750
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 104/247 (42%), Gaps = 36/247 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA ++ A+ DM G K + + N L+ ++ I L ++ + ++ DI
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE-GLKPDI 567
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I +C+ + KA ++E+ K G++P+ + Y LI + ++ G+ +
Sbjct: 568 VTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDT 627
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG----------------LMQRF----- 285
M G P T+N + + + +A ++ ++Q F
Sbjct: 628 MKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGK 687
Query: 286 --------------GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
I P+++TY ++ +C+ G+ + A K++ M+ ++P+ Y T
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNT 747
Query: 332 MIHYLCQ 338
+I C+
Sbjct: 748 LISGCCE 754
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 137/300 (45%), Gaps = 41/300 (13%)
Query: 125 YGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTES----RDLKAIQAFLMEVPEK 179
YGKA + + A+D F+ M + CKR+VKS N+ L V+ R L+ +++
Sbjct: 122 YGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLE-FYDYVVNSNMN 180
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+I + SFN+VIKA C++G +D+A V M + PD TY TL+ K+ R +
Sbjct: 181 MNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L + M +GC P+ +NV I L K + KL+ M G P+EVTYN +I
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIH 300
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMP----------------------------------- 324
G C G LD A + M+ + +P
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL 360
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N+ IY +I L +EG A + K +K P++ SA+++GL + +P +A I+
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEIL 420
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++ VI C G ++A ++ M G P+V TY++L+ F+K E +W
Sbjct: 396 NIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVW 455
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC N ++V I L R +A + M GI+PD V Y+ +IKG C
Sbjct: 456 REMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGI 515
Query: 305 GHLDMAKKVYSAMLGR---RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G +D A K+Y ML + + P+ Y ++ LC + D + A + + + P V
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDV 575
Query: 362 DTISALLEGLKKNNQPCK 379
T + L L + + C+
Sbjct: 576 ITCNTFLNTLSEKSDSCE 593
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++++I + G ++A + +M + G +P+++ Y+ +I ++ +P + N M+
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC PN+ T++ ++ S +A ++ M G +E Y+++I G C G +
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-----IMCKDSMKKNWVPSVDT 363
A V+S ML + P+ Y +MI LC G + A ++C++ K P V T
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVT 542
Query: 364 ISALLEGL 371
+ LL+GL
Sbjct: 543 YNILLDGL 550
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 6/313 (1%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
++ ++F+ + + + Y + + L R D LL+ +S +G ++
Sbjct: 204 DRAIEVFRGMPEKK-CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS--EGCSPSPVIY 260
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
+++ G K G + +M L GC + N + L L + L +
Sbjct: 261 NVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
I D+ ++ + +D A L ++ M++ G + + Y+ LIS +K+ + E
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRAMDGARL-LISMEERGYRLNQHIYSVLISGLFKEGKAE 379
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
LW M KGC PN+ ++ I L + + +A +++ M G P+ TY+ ++
Sbjct: 380 EAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLM 439
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
KGF ++G + A +V+ M N Y +I LC G A ++ +
Sbjct: 440 KGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 359 PSVDTISALLEGL 371
P S++++GL
Sbjct: 500 PDTVAYSSMIKGL 512
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 18/232 (7%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M + K G+ + A+ + +M GC R + + L +K ++
Sbjct: 438 LMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKML-TI 496
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKA---YLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
I+ D +++ +IK C +G +D A Y M+ ++ +PDV+TY L+
Sbjct: 497 GIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDV 556
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L N M+ +GC P++ T N + L K S + + +E+ L+
Sbjct: 557 SRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSF---------LEELVARLL 607
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ + A K+ MLG+ L P + ++ +C+ N A C
Sbjct: 608 -----KRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAINKC 654
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 5/256 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G +K A++ F ++ + NA + D FL E+ E+ +
Sbjct: 205 FCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNER-KVAP 259
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++NI+I C+ DKA ++ EM GV PD +T+ +++ K + E + L
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + C P+ T+N I L ++ +A L+ G PD VTY+++ G C+
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M G+ PN Y T+I LC+ AY + + + +VP V T
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439
Query: 365 SALLEGLKKNNQPCKA 380
+ +++GL K + KA
Sbjct: 440 TIIVDGLCKEGRLDKA 455
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA A + ++M G + N+ + L ++ + + L + E+ + +
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER-NCRPSC 331
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ +D+A ++ E G PDV+TY+ L K R + L
Sbjct: 332 CTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 391
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGC PNL T+N I L ++ +A +L+ + G PD VTY +++ G C+ G
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A K+ ML R P+ Y ++ LC+ G + A+ + K+ + K+ +
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHF 394
L+ G K+++ +A ++ + R P+
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGI-RGTPYI 538
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I C D A + EM + V PDV TY LI K ++ + + +
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEML 284
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+ TFN + L + +A+ L+ +M P TYN +I G C+
Sbjct: 285 HEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ 344
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++D AK + + +P+ Y + LC+ G + A+ + K+ K P++ T
Sbjct: 345 QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTY 404
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L++GL K ++ KA ++
Sbjct: 405 NTLIDGLCKASKTEKAYELL 424
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 12/301 (3%)
Query: 95 RFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVK 151
R D I ++ E + +P + +M + +GK + A MH GC V
Sbjct: 553 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK---VDEAFPFLESMHSAGCVPDVV 609
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S N + L ++ K + L ++ + I D ++N ++ FC+ D A ++
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKEERFDDAVGILKN 668
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN-LATFNVRIQHLVNKR 270
M K GV PD +TY TLIS + NR L + M+ GC + T+N I L +
Sbjct: 669 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
QA LM M G+E + VTYN+ I C+ G LD A + S M R + Y
Sbjct: 729 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYT 785
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMK-KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I LC+ + A + ++ + K + T + L++ K + +A T++ L+ +
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ 845
Query: 390 R 390
R
Sbjct: 846 R 846
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 5/229 (2%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G K + + N L+ L E+ I A + + + D +++++VIK+ C+M +DK
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAP-DSYTYHLVIKSLCQMNQIDK 178
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ ++ + + G KP+V YT L AF K R + ++ + P+ +N I
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIH 234
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
K A + + M + PD TYN++I G C++ D A ++ M+ R + P
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + +++ LC+ G F A+ + ++N PS T + L+ GL K
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCK 343
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 33/241 (13%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I C+ +KAY ++ + G PDV+TYT ++ K+ R + +
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV------------ 292
M+ +GC P++ T+ ++ L R +A+ + M D +
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519
Query: 293 --------------------TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
YN ++ G+C+ G LD V+ M R +PN K Y +
Sbjct: 520 SRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ LC+ G + A+ + VP V + + +++GL K ++P +A ++ ++Q +
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639
Query: 392 P 392
P
Sbjct: 640 P 640
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 4/258 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ M GC +V + A ++ L + + E+ K D
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK-DCTADA 506
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ +C+ +A V+ ++ P + Y L+ + K+ R + ++
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFED 563
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C+GC PN+ T+N+ + L + +A + M G PD V+YN++I G ++
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A++V M+ + P+ Y T++ C+E F+ A + K+ +K P T +
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683
Query: 367 LLEGLKKNNQPCKANTIM 384
L+ GL + N+ A +M
Sbjct: 684 LISGLSQTNRLGDAYELM 701
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
LM+ ++ + ++NI I C+ G LD+A ++ EM L D ++YTT+I
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGL 791
Query: 232 YKDNRPEIGNGLWNLMVC-KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K + + + L MV KG TFN+ I +R +A L+GLM + G P
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+TYN+VI C+ +D A +++ M R ++ + Y +I+ LC +G
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 901
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N ++ +C+ G LD+ V +M G P++ TY ++ K + + M
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P++ ++N+ I L + +A +++ M + GI PD VTYN ++ FC+ D
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
A + M+ + P+ Y T+I L Q AY + + ++ V S T
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 715
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 9/194 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A+ M +G + + N + L + L + L E+ D
Sbjct: 726 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM----DTLRDE 781
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT---LISAFYKDNRPEIGNGL 243
S+ VI C+ LD+A + EM + VK IT T LI AF K R + L
Sbjct: 782 VSYTTVIIGLCKAEQLDRASKLAREM--VAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
LMV +GC P++ T+N+ I L + +A +L M GI V+Y ++I G C
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899
Query: 304 SGHLDMAKKVYSAM 317
G A +V M
Sbjct: 900 QGRGKEALQVLEEM 913
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN++I AF + LD+A ++ M + G P VITY +I+ K ++ + L++ M
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+G + ++ V I L + R +A +++ M E D++ + V
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 154/364 (42%), Gaps = 38/364 (10%)
Query: 51 LVKLKAERDPEKLFQLF-KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
+ L+ + DPE ++ A A + + ++ +E+ + +L A FD ++ L+ +
Sbjct: 60 VTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRRE 119
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYD-MHLYGCKRTVKSLNAALKVLTESRDLKA 168
G + + Y + + A D + + ++G + + N L VL E +K
Sbjct: 120 GHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKL 179
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+++ E+ + I+ D+ +FN VI A C A L++ EM V PD T+TTL+
Sbjct: 180 LESAYTEMSSQ-GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238
Query: 229 SAFYKDNRPE---------------------------------IGNGLWNLM--VCKGCF 253
F ++ E +G+ L + + G
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFE 298
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ TF+ + L A K++GLM + G EPD TY+ VI C +G L+ AK +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ +P+ + T+I LC E A + ++ K P+V T + L+ L K
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418
Query: 374 NNQP 377
P
Sbjct: 419 VGDP 422
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 138/324 (42%), Gaps = 3/324 (0%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L+ + AE KL + ++ + + F + L AR+ +LE S
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD 226
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAI 169
E +M + + G I+ A+ M GC T ++N + + R A+
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
E+ + F + D +F+ + C+ G +D A V+ M + G +PDV TY+T+I+
Sbjct: 287 GYIQQEIADGF--EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVIN 344
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ E G+ N MV GC P+ TFN I L + + +A L + G+ P
Sbjct: 345 CLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSP 404
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ T+N++I C+ G +A +++ M P+ Y +I LC G A +
Sbjct: 405 NVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLL 464
Query: 350 KDSMKKNWVPSVDTISALLEGLKK 373
K+ S T + +++GL K
Sbjct: 465 KEMEVSGCPQSTVTYNTIIDGLCK 488
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A M GC + N + L L+ E+ K + ++++
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVK-GLSPNVYT 408
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FNI+I A C++G A + EM+ G PD +TY LI + L M
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC + T+N I L +RR +A ++ M GI + +T+N +I G C + +D
Sbjct: 469 VSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERID 528
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ M+ L PN Y +++ + C++G+ + A + + + V T + L+
Sbjct: 529 DAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLI 588
Query: 369 EGLKK 373
GL K
Sbjct: 589 NGLCK 593
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 1/245 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D ++ + G V + N + L + D + L E + D ++N
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGD-PHLAVRLFEEMKSSGCTPDEVTYN 445
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I C G L KA ++ EM+ G +TY T+I K R E +++ M
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N TFN I L N R A +L+ M G++P+ VTYN ++ +C+ G++ A
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M + Y T+I+ LC+ A + + K P+ + +++
Sbjct: 566 ADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625
Query: 371 LKKNN 375
L + N
Sbjct: 626 LFRGN 630
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 93/193 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ N++I +C++G + A + + G +PD +T++T ++ ++ + + LM
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +GC P++ T++ I L N +A ++ M G PD T+N +I C L
Sbjct: 328 LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQL 387
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A + + + L PN + +I+ LC+ GD +LA + ++ P T + L
Sbjct: 388 EEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNIL 447
Query: 368 LEGLKKNNQPCKA 380
++ L + + KA
Sbjct: 448 IDNLCSSGKLAKA 460
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 1/253 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A+ F +M GC + N + L S L L E+ Q +
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV 477
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ +++A V +M G+ + IT+ TLI R + L +
Sbjct: 478 -TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G PN T+N + H + +A ++ M G E D VTY +I G C++
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A K+ M + + P K Y +I L + + A + ++ + P T
Sbjct: 597 TQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKI 656
Query: 367 LLEGLKKNNQPCK 379
+ GL + P K
Sbjct: 657 VFRGLCRGGGPIK 669
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 193 IKAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
I ++ + + D A+ LV ++ GV+ + Y L++ + ++ ++ + M +G
Sbjct: 132 IGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQG 191
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P++ TFN I L R++ A ++ M + PDE T+ +++GF G ++ A
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAAL 251
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ + M P +I+ C+ G A + + + P T S + GL
Sbjct: 252 RLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGL 311
Query: 372 KKNNQPCKANTIMALV 387
+N A ++ L+
Sbjct: 312 CQNGHVDHALKVLGLM 327
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 4/277 (1%)
Query: 99 IEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
++H E+ + + + G ++ M++ G +AG++ A+ +M +GC V + N
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L + R L + L E+ E+ + D+ +F +I +C G ++KA +
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKER-GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ 433
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
++PD++TY TLI + N LW+ M + FPN T+++ I K + A
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+ M GI P+ +TYN +IKG+CRSG++ ++ M ++MP+ Y T+IH
Sbjct: 494 FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+EG + A+ + K +N P T + ++ G
Sbjct: 554 YVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFS 590
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 4/265 (1%)
Query: 123 MLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
ML G +AG ++ A+ + +M V S + + + T ++ +L E+ E
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE- 327
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F + D + +VI FC G++ +A V EM G PDV+TY TL++ K+ R
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L N M +G P+L TF I +A + + + PD VTYN +I
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID 447
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G CR G L A +++ M R + PN Y +I C++G + A+ + + K VP
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Query: 360 SVDTISALLEGLKKNNQPCKANTIM 384
++ T +++++G ++ K +
Sbjct: 508 NIMTYNSIIKGYCRSGNVSKGQQFL 532
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 89/163 (54%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ + ++ NI++ ++C+ + V+ EM+K V PDV+T+ ++ A ++ E
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + MV KG P L T+N ++ L+ R +A ++ M G+ PD ++N++I GFC
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
R+G L+ A + Y M GRR+ P+ + +I + G+ + A
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAM---DTFYDMHLY 144
L RR E LL K +G +++G + G I+ A+ DT D L
Sbjct: 379 LCKERRLSDAEELLNEMKE--RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL- 435
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF----SFNIVIKAFCEMG 200
+ + + N + + DL E+ + H + +IF +++I+I + CE G
Sbjct: 436 --RPDIVTYNTLIDGMCRQGDLGKAN----ELWDDMHSR-EIFPNHVTYSILIDSHCEKG 488
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+D A+ + EM G+ P+++TY ++I + + G M P+L T+N
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I V + + +A L+ +M+ ++PD VTYN++I GF G++ A VY M R
Sbjct: 549 TLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGAR 608
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ P+R Y +MI+ G+ ++ + + ++K P
Sbjct: 609 GIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++A A + + K I+ + ++N V+K G DKA V M GV PDV ++
Sbjct: 209 DVEAAMALIDSMVSK-GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSF 267
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI F + E + M + P++ +F+ I + A + + M+
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
FG+ PD V Y +VI GFCR+G + A +V M+ +P+ Y T+++ LC+E +
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
A + + ++ P + T + L+ G ++ KA
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + GM+ A++ M GC V + N L L + + L A E+ E+ +
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVP- 428
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +F +I C+ G + KA + M + +KPD++TY LI F K E N LW
Sbjct: 429 DFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELW 488
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ + FPN ++ + + N +A +L M R GI+P VT N VIKG+CRS
Sbjct: 489 NEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRS 548
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + M+ + P+ Y T+I+ + + A+ + K P V T
Sbjct: 549 GDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTY 608
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ +L G + + +A I+ +++R +
Sbjct: 609 NVILNGFCRQGRMQEAELILRKMIERGI 636
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 33/389 (8%)
Query: 36 PNREP---------LVDKPLEPPALVKLKAERDPEKL-FQLFKANAHNRI-VIENKYAFE 84
PN+EP LV+K L V+ K D + L ++ + + +R+ ++E+ +
Sbjct: 49 PNQEPTSSAPPDSFLVEKILLNLRRVRSKRLSDAQTLILRMIRRSGVSRVEIVESLISMS 108
Query: 85 DT--VSRLAGARRFDYIEHLLEHQKSLPQG-------RREGFIMRI----MMLYG--KAG 129
T V L FD + + L +G RR+GF++ I +L G K G
Sbjct: 109 STCGVDNLV----FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMG 164
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A + + ++ G + V +LN + L + + ++ FL+++ +K I DI ++
Sbjct: 165 WVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQK-GIFADIVTY 223
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N +I A+C G+L +A+ VM M G+KP + TY +I+ K R G++N M+
Sbjct: 224 NTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS 283
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P+ T+N + +A + M G+ PD ++++ +I R+GHLD
Sbjct: 284 IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQ 343
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M L+P+ IY +I+ C+ G + A + +++ V + +L
Sbjct: 344 ALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILN 403
Query: 370 GLKKNNQPCKANTIM-ALVQRR-VPHFSS 396
GL K AN + +V+R VP F +
Sbjct: 404 GLCKKKLLADANALFDEMVERGVVPDFCT 432
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A D F DM G + S ++ + V + + L + ++ + ++ + I+
Sbjct: 308 EAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVI-YTIL 366
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +C G++ +A + +M + G DV+ Y T+++ K N L++ MV +G
Sbjct: 367 INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ TF I + +A L G+M + I+PD VTYN++I GFC++ ++ A +
Sbjct: 427 VPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANE 486
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ M+ R++ PN Y +++ C G + A+ + + ++K P++ T + +++G
Sbjct: 487 LWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 373 KNNQPCKANTIMA 385
++ KA+ +
Sbjct: 547 RSGDLSKADEFLG 559
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 92/175 (52%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ I++ +C +G + +A+ + EM + G+KP ++T T+I + + + M
Sbjct: 502 SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G P+ T+N I V +A L+ M+ G++PD VTYN+++ GFCR G +
Sbjct: 562 ISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRM 621
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
A+ + M+ R + P+R Y T+I+ + + A+ + +++ +VP D
Sbjct: 622 QEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A + +M G K T+ + N +K S DL FL ++ + +
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE-GVGP 568
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I F + +DKA+ ++ +M+ G++PDV+TY +++ F + R + +
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
M+ +G P+ +T+ I V++ +A + M + G PD+
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 159/354 (44%), Gaps = 21/354 (5%)
Query: 41 LVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
+V+ PLE P EK+F+ ++ + A + FD +E
Sbjct: 50 VVENPLEAPI---------SEKMFKSAPKMGSFKL---GDSTLSSMIESYANSGDFDSVE 97
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKV 159
LL + + E + + YGKA + A+D F+ M + CKR+VKS N+ L V
Sbjct: 98 KLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNV 157
Query: 160 LTES----RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ R L+ +++ +I + SFN+VIKA C++ +D+A V M +
Sbjct: 158 IINEGLYHRGLE-FYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER 216
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
PD TY TL+ K+ R + L + M +GC P+ +NV I L K +
Sbjct: 217 KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 276
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
KL+ M G P+EVTYN +I G C G LD A + M+ + +PN Y T+I+
Sbjct: 277 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
L ++ A + ++ + + S L+ GL K KA M+L ++
Sbjct: 337 LVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG---KAEEAMSLWRK 387
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +++++ C G ++A ++ M G P+ TY++L+ F+K E +W
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVW 455
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC N ++V I L R +A + M GI+PD V Y+ +IKG C
Sbjct: 456 KEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGI 515
Query: 305 GHLDMAKKVYSAMLGR---RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G +D A K+Y ML + + P+ Y ++ LC + D + A + + + P V
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Query: 362 DTISALLEGLKKNNQPC 378
T + L L + + C
Sbjct: 576 ITCNTFLNTLSEKSNSC 592
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 9/324 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
AL KL R ++ ++F+ R + + Y + + L R D LL+ +S
Sbjct: 196 ALCKL---RFVDRAIEVFRGMPE-RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS- 250
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+G ++ +++ G K G + +M L GC + N + L L
Sbjct: 251 -EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ L + I D+ ++ +I + A ++ M++ G + Y+ L
Sbjct: 310 KAVSLLERMVSSKCIPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
IS +K+ + E LW M KGC PN+ ++V + L + + +A +++ M G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ TY+ ++KGF ++G + A +V+ M N+ Y +I LC G A +
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 348 MCKDSMKKNWVPSVDTISALLEGL 371
+ + P S++++GL
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F ++++I C +G + +A +V +M +G+KPD + Y+++I + L++
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 247 MVCK---GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF-- 301
M+C+ P++ T+N+ + L ++ +A L+ M G +PD +T N +
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Query: 302 ----CRSGH---------------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
C G + A + MLG+ L P + ++ +C+
Sbjct: 588 KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Query: 343 NLAYIMC 349
N A C
Sbjct: 648 NAAIDKC 654
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G A+D F M K +V + + L + + E+ K I+ D+
Sbjct: 251 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADV 309
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C G D ++ EM + PDV+T++ LI F K+ + L+N
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G P+ T+N I + +AN++ LM G EPD VTY+++I +C++
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D +++ + + L+PN Y T++ CQ G N A + ++ + + PSV T
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 489
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +Q+
Sbjct: 490 LLDGLCDNGELNKALEIFEKMQK 512
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+++ I+I +C L A+ V+ KLG +PD IT++TL++ F + R
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV P+L T + I L K R +A L+ M +G +PDEVTY V+
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+SG+ +A ++ M R + + Y +I LC++G F+ A + + K V
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309
Query: 362 DTISALLEGL 371
T S+L+ GL
Sbjct: 310 VTYSSLIGGL 319
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I FC+ L +A + M G +PD++TY+ LI+++ K R + G L+
Sbjct: 378 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG PN T+N + + A +L M G+ P VTY +++ G C +
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A +++ M R+ IY +IH +C + A+ + K P V T
Sbjct: 498 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 557
Query: 365 SALLEGLKKNNQPCKANTI 383
+ ++ GL K +A+ +
Sbjct: 558 NVMIGGLCKKGSLSEADML 576
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + D +F+ ++ FC G + +A ++ M ++ +PD++T +TLI+ R
Sbjct: 162 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 221
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV G P+ T+ + L S A L M+ I+ V Y++VI
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 281
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ G D A +++ M + + + Y ++I LC +G ++ M ++ + +N +
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P V T SAL++ K + +A
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEA 363
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +++I+I ++C+ +D + E+ G+ P+ ITY TL+ F + + L+
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 472
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G P++ T+ + + L + +A ++ MQ+ + YN++I G C +
Sbjct: 473 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 532
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P+ Y MI LC++G + A ++ + + P T
Sbjct: 533 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 592
Query: 365 SALL 368
+ L+
Sbjct: 593 NILI 596
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + + +I C G + +A +++ M + G +PD +TY +++ K + L+
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + ++ +++ I L A L M+ GI+ D VTY+ +I G C
Sbjct: 263 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+GR ++P+ + +I +EG A + + + + P T
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 382
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L++G K N +AN + L+
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLM 405
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
++ Q D ++ V+ C+ G A + +M++ +K V+ Y+ +I + KD +
Sbjct: 232 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 291
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L+N M KG ++ T++ I L N + K++ M I PD VT++ +I
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F + G L AK++Y+ M+ R + P+ Y ++I C+E + A M + K
Sbjct: 352 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 411
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P + T S L+ N CKA +
Sbjct: 412 PDIVTYSILI------NSYCKAKRV 430
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 133 HAMDTFYDMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
H + +D+ + GC+ + + + + +++ + E+ K I + ++N
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNT 454
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ FC+ G L+ A + EM GV P V+TY L+ + ++ M
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
+ +N+ I + N + A L + G++PD VTYN++I G C+ G L A
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574
Query: 312 KVYSAMLGRRLMPNRKIYQTMIH 334
++ M P+ Y +I
Sbjct: 575 MLFRKMKEDGCTPDDFTYNILIR 597
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P I + L SA + + ++ G M G ++ T + I K++ A +
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G + G EPD +T++ ++ GFC G + A + M+ + P+ T+I+ LC
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 216
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMAL 386
+G + A ++ ++ + P T +L N+ CK+ N+ +AL
Sbjct: 217 KGRVSEALVLIDRMVEYGFQPDEVTYGPVL------NRLCKSGNSALAL 259
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 144/331 (43%), Gaps = 8/331 (2%)
Query: 46 LEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
+ P L KL + D +LF + + ++ + +L F I+ LL
Sbjct: 70 ITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLM 129
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTES 163
K +E + IM Y KAG +M ++Y C+ T KS N L++L
Sbjct: 130 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 189
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
K ++ + I +F+F +V+KA C + +D A V+ +M K G P+ +
Sbjct: 190 NCHKVAANVFYDMLSR-KIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVI 248
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y TLI + K NR L M GC P+ TFN I L R +A K++ M
Sbjct: 249 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 308
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G PD++TY ++ G C+ G +D AK ++ R P I+ T+IH G +
Sbjct: 309 IRGFTPDDITYGYLMNGLCKIGRVDAAKDLFY----RIPKPTSVIFNTLIHGFVTHGRLD 364
Query: 344 LAYIMCKDSMKK-NWVPSVDTISALLEGLKK 373
A + D + VP V T ++L+ G K
Sbjct: 365 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 395
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G++ A++ DM GCK V S + + + L E+ ++
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD-GLKP 451
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ FN +I AFC+ + +A + EM + G KPDV T+ +LIS + + EI + LW
Sbjct: 452 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD--EIKHALW 509
Query: 245 NL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M+ +G N T+N I + + +A KL+ M G DE+TYN +IKG C
Sbjct: 510 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLC 569
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R+G +D A+ ++ ML L+P+ +I+ LC+ G A K+ + + P +
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629
Query: 363 TISALLEGLKKNNQPCKANTI 383
T ++L+ GL C+A I
Sbjct: 630 TFNSLINGL------CRAGRI 644
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 3/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQ 183
+ K G I A + +M G K N + E R +A++ F E+P K +
Sbjct: 428 FCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF-REMPRK-GCK 485
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+++FN +I CE+ + A ++ +M GV + +TY TLI+AF + + L
Sbjct: 486 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 545
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N MV +G + T+N I+ L +A L M R G+ P ++ N++I G CR
Sbjct: 546 VNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCR 605
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG ++ A + M+ R P+ + ++I+ LC+ G M + + P T
Sbjct: 606 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 665
Query: 364 ISALLEGLKKNN 375
+ L+ L K
Sbjct: 666 YNTLMSWLCKGG 677
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K I A++ F +M GCK V + N+ + L E ++K L ++ + +
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVA 521
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I AF G + +A ++ EM G D ITY +LI + + L+
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P+ + N+ I L +A + M G PD VT+N +I G CR+
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ + + P+ Y T++ +LC+ G A ++ + ++ +VP+ T
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701
Query: 365 SALLEGL 371
S LL+ L
Sbjct: 702 SILLQSL 708
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
P G++M + K G + A D FY + K T N + L
Sbjct: 314 PDDITYGYLMNGLC---KIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDA 366
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+A L ++ + I D+ ++N +I + + G++ A V+ +M+ G KP+V +YT L+
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K + + L N M G PN FN I + R +A ++ M R G +P
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D T+N +I G C + A + M+ ++ N Y T+I+ + G+ A +
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + + T ++L++GL + + KA ++
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSL 580
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 3/254 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + +++A+D F M YG V+S NA + + F E+ +++ I
Sbjct: 254 YAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREM-QRYRISP 312
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++ N+V+ AFC+ G L+KA V M+ +G P + +Y TLI+ + G L
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM G P+ TFN I + +ANK+ M+ + P+ +TYN +I G+ +
Sbjct: 373 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 432
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ +M +++ ML + + Y +I LC EG A + K+ ++N VP+ T
Sbjct: 433 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 492
Query: 365 SALLEG--LKKNNQ 376
SAL+ G ++KN++
Sbjct: 493 SALITGQCVRKNSE 506
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 13/257 (5%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK------VLTESRDLKAIQAFLM 174
+M + K G ++ A++ F M G T+ S N + +L LK +
Sbjct: 320 VMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILM---- 375
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
EK ++ D +FN +I FC G L +A + EM+ V P+ ITY TLI+ + +
Sbjct: 376 ---EKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 432
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
E+G L + M+ G ++ T+N I L + R+ +A L+ + R + P+ T+
Sbjct: 433 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 492
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I G C + + A ++Y +M+ PN ++ +I C+ DF+ A + ++ +
Sbjct: 493 SALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSE 552
Query: 355 KNWVPSVDTISALLEGL 371
++ P DT+S L GL
Sbjct: 553 RSIAPDSDTLSELCRGL 569
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ DI ++N +I C G KA ++ E+ + + P+ T++ LI+ E
Sbjct: 450 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAF 509
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M+ GC PN TF + I A +++ M I PD T + + +G
Sbjct: 510 QLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGL 569
Query: 302 CRSGHLDMAKKVYSAMLGRRLMP 324
SG ++A K+ M + LMP
Sbjct: 570 WLSGKEELALKLCKEMEMKHLMP 592
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 132/284 (46%), Gaps = 9/284 (3%)
Query: 90 LAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
LA R F HLL+ ++++P R+ I+ + Y +A M A D F M YG
Sbjct: 145 LAKHRHFGLARHLLDEMRERAVPISRQ--LILALTRRYVRAEMPSEAADLFRRMEEYGAG 202
Query: 148 RTVKSLNAALKVLTESRDLKA-IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+ A+L + L + QA F D+ + V+ A+C G LD+A
Sbjct: 203 APDPATLASLLAALSKKRLASEAQALFDSCRTVF--TPDVVLYTAVVHAWCRAGRLDEAE 260
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V EMQ+ G+ P+V TYT +I A Y+ + L M+ GC PN TFN ++
Sbjct: 261 RVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAIMRSH 320
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC--RSGHLDMAKKVYSAMLGRRLMP 324
V RS Q ++ MQ+ EPD +TYN +I+ C G+LD A KV M ++ +P
Sbjct: 321 VKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVP 380
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ + M L G+ A+ + + + P+V T + LL
Sbjct: 381 DCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLL 424
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 123/273 (45%), Gaps = 4/273 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + +AG + A F +M G V + A + + + + Q L ++ +
Sbjct: 246 VVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS- 304
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ +FN ++++ + G ++ V +MQ+L +PDVITY LI + +
Sbjct: 305 GCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLD 364
Query: 241 NGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L L M K C P+ TFN + L+ A+KL M+ +P+ VTYN ++
Sbjct: 365 AALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLL 424
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNW 357
+ F + +DM ++ M + PN Y +I C G++ A+ K+ + +K++
Sbjct: 425 RLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSF 484
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
PS +L L+K Q K ++ L+ R
Sbjct: 485 KPSKQVRDMVLVLLRKAGQLKKHEELVELMVDR 517
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 2/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++ +++ ++D+F M L G + S N AL +L +S +L F E + QFD+
Sbjct: 50 QSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR--TQFDV 107
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+SF I IKAFCE G + K + ++ +M+ +GV P+V YT LI A ++ + +++
Sbjct: 108 YSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSR 167
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G N + + I K +L M+ G+ P+ TYN +I +CR G
Sbjct: 168 MDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGK 227
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L +A KV+ + R + N Y +I LC++G + A + + + + P+ T +
Sbjct: 228 LSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNM 287
Query: 367 LLEGLKKNNQPCKA 380
L++GL Q KA
Sbjct: 288 LMDGLCNTGQLDKA 301
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + A F ++ G + N + L + + L+E ++ HI
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEG-LLERMKRAHINP 280
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+FN+++ C G LDKA + +++ +G+ P ++TY LIS F K + + L
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G P+ T+ + + V +A ++ LM+R G+ PD+ TY ++I G C
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A K+Y +M+ L PN IY TMI+ C+E + A ++ +K P+V +
Sbjct: 401 GNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASY 460
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ ++ L K+ + +A ++
Sbjct: 461 ISTIQILCKDGKSIEAKRLL 480
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++N +I +C G L A+ V E+ K GV + +TY LI + + GL
Sbjct: 211 NLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLL 270
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M P TFN+ + L N + +A + ++ G+ P VTYN++I GF +
Sbjct: 271 ERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKV 330
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ + ++ M R + P++ Y +++ + D AY M + VP T
Sbjct: 331 GNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTY 390
Query: 365 SALLEGL 371
L+ GL
Sbjct: 391 GVLIHGL 397
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + A+ + L G T+ + N + ++ + + + E+ ++ I
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDR-GISPSKV 353
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLWNL 246
++ I++ F ++KAY + M+++G+ PD TY LI K N E + L+
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVE-ASKLYKS 412
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV PN +N I + S++A K + M + G+ P+ +Y I+ C+ G
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGK 472
Query: 307 LDMAKKVYSAMLGRRLMP 324
AK++ M L P
Sbjct: 473 SIEAKRLLKEMTEAGLKP 490
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 185 DIFSFNIVIKAFCEMGIL---DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D ++ ++I C G + K Y MVEM ++P+ + Y T+I+ + K+
Sbjct: 386 DQHTYGVLIHGLCIKGNMVEASKLYKSMVEMH---LQPNDVIYNTMINGYCKECNSYKAL 442
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
MV G PN+A++ IQ L +S +A +L+ M G++P E
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE 492
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 142/303 (46%), Gaps = 38/303 (12%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ +FY M + +V L + + + + + ++ + F + +++S N
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM-DLFGVTHNVYSLN 135
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I C + +D A VM +M KLG++PD IT+ TLI+ + + + GL+N MV
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 251 G---------------C--------------------FPNLATFNVRIQHLVNKRRSWQA 275
G C PN+ T+N I L R +A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+ + M GI PD VTYN ++ GFC G L+ A +++ M+GR +MP+ + ++
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPH 393
LC+EG + A + + +K P+ T +AL++G +NQ +A ++ ++ + P+
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Query: 394 FSS 396
SS
Sbjct: 376 LSS 378
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFDIF 187
G IK A+ F +M G + V S N + L ++ + + A++ F E+ + ++
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF--RKMEQNRGKPNVV 237
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I + C+ ++++A + EM G+ PDV+TY T++ F + L+ M
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V + P+ TFN+ + L + +A + M G EP+ TYN ++ G+C +
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A KV M+G+ PN Y +I+ C+ N A + + +KN P T S L
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417
Query: 368 LEGLKKNNQPCKA 380
++GL + +P +A
Sbjct: 418 MQGLCQVGRPREA 430
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A+ F M K V + N + L + R + FL E+ ++ I D+
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR-GIPPDV 271
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ FC +G L++A + EM V PD +T+ L+ K+ +
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PN T+N + + +A K++G+M G P+ +YN++I G+C+S
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ AK++ S M + L P+ Y T++ LCQ G A + K+ +P + S
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451
Query: 367 LLEGLKKNNQ 376
LL+G K+
Sbjct: 452 LLDGFCKHGH 461
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +FNI++ C+ G++ +A V M + G +P+ TY L+ + N+ + +
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M+ KGC PNL+++N+ I +R +A +L+ M + PD VTY+ +++G C+
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQV 424
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ++ M L+P+ Y ++ C+ G + A + K+ ++ P++
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484
Query: 365 SALLEGL 371
+ L+ G+
Sbjct: 485 TILIRGM 491
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 111/222 (50%), Gaps = 3/222 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+NI+I +C+ +++A ++ EM + + PD +TY+TL+ + RP L+
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+L +++ + +A KL+ M I+P+ + Y ++I+G +
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L++AK+++S + + P+ Y MI L +EG + AY + ++P +
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ +++G +N ++T + L+ V S S F+ +L
Sbjct: 555 NVIIQGFLQNQD---SSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + S N + +S+ + + L E+ EK ++ D +++ +++ C++G +
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK-NLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G+ PD++ Y+ L+ F K + L M + PN+ + + I+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + A +L + GI PD TYN++IKG + G D A + + M +P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ Y +I Q D + A + + + K + T LL+
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 149/317 (47%), Gaps = 7/317 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
D +E LL+ + + R +++++ YG+ A D F + C TV +
Sbjct: 11 LDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTK 70
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ +L S + + + ++ +K Q D F++N++I+ F G LD A + EM+
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQK-GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G +PD TY L++A K R + ++ M+ +G PN+ T+N+ + R+ Q
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF---RKVGQL 186
Query: 276 NKLMGL---MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ +GL M+R G +P VTYN+++ C +G + A+K++ M G P+ Y T+
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
++ L + G A+ + ++ + + + ++LL L K + +M + R+
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306
Query: 393 HFSSNQLSAFKSILSKS 409
H + + L K+
Sbjct: 307 HPDAFSFNTIMDALGKA 323
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 10/282 (3%)
Query: 106 QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+ S P GF++ + GKAG ++ A F M G + + N + +
Sbjct: 129 KGSEPDEYTYGFLVNAL---GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
L E+ + Q + ++NI++ A C G + A + +M G PD TY+
Sbjct: 186 LDMALGLFAEMKRR-GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV---NKRRSWQANKLMGLM 282
TL++ K R E + ++ MV +G +L +N + L N R W KLM M
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW---KLMKEM 301
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
R G PD ++N ++ ++ D A++V++ M+ P+ Y +I + GD
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A M ++ ++ ++P T ++L+ L + Q +A ++
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
AG + A F+ M GC + + + L +S ++ E+ ++ + D+
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR-GVAVDLV 276
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ + G +D+ + +M EM + G PD ++ T++ A K N+P+ ++ M
Sbjct: 277 NYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V GC P+L ++N+ I + QA +++ M G P+ TYN +I G +
Sbjct: 337 VESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQV 396
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A V M P+ Y ++ L + G+ A + + K P + +
Sbjct: 397 DEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVR 456
Query: 368 LEGLKKNNQ 376
++GL +++
Sbjct: 457 IDGLAFDDR 465
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 4/235 (1%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQF 184
GK+G ++ A F +M G + + N+ L L ++ ++ + + E+ K FH
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP-- 308
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FSFN ++ A + D A V M + G KPD+I+Y LI ++ + +
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQML 368
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P T+N I L + +A ++ M+ G PD VTYN ++ +
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKR 428
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G A +++ M + + P+ Y I L + + A ++ KD MK P
Sbjct: 429 GENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD-MKAVGCP 482
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 200 GILDKAYLVMVEMQKLG--VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
GILD ++ EM G ++P+ T LI+A+ + N+ L+N C P +
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVH 66
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
F I LVN +A + + + G + D YN++I+ F RSG LD A +++ M
Sbjct: 67 AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ P+ Y +++ L + G A +++ P++ T + L++ +K Q
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 378 CKANTIMALVQRR 390
A + A ++RR
Sbjct: 187 DMALGLFAEMKRR 199
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 9/287 (3%)
Query: 87 VSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
+ LA F HLL+ ++S+P + I+ ++ Y +A M A D F M Y
Sbjct: 151 IDLLAKHHHFPLARHLLDEMRERSVPISAQ--LILALIRRYVRAEMPSEASDLFRRMEEY 208
Query: 145 GCKRT-VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
G +L + L L++ R QA F D+ + ++ A+C G L+
Sbjct: 209 GAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVF--TPDVVLYTTLVHAWCRSGRLN 266
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V EMQ+ GV P+V TYT +I A Y+ + L M+ GC PN ATFN +
Sbjct: 267 EAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM 326
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH--LDMAKKVYSAMLGRR 321
+ V RS Q ++ M++ G EPD +TYN +++ C G LD A K+ + M+ +
Sbjct: 327 RAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKG 386
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+P+ + M+ + G+ N A + + + P+V T + L+
Sbjct: 387 CIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLM 433
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ ++G + A F +M G V + A + + + + Q L ++ +
Sbjct: 259 WCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS-GCPP 317
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +++A + G ++ V +M++LG +PD+ITY L+ + + +
Sbjct: 318 NTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMK 377
Query: 245 NL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M+ KGC P+ TFN ++ ++ A KL MQ +P+ VTYNL+++ F
Sbjct: 378 MLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFN 437
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI----MCKDSMKKNWV 358
+DM ++ M + + PN Y +I C G++ A++ M ++ K
Sbjct: 438 LEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTK 497
Query: 359 PSVDTISALL 368
P D + ALL
Sbjct: 498 PVYDMVLALL 507
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
F + + + + +S NA L L +R L+ A P K +I ++ S NI++K
Sbjct: 156 FLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLV 215
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
MG LD A V+ EM G+ PDV+TYTT+++A+ E L++ +V G P+
Sbjct: 216 GMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDAT 275
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
+ V + ++ + A ++M M+ G++P+EVTY++VI+ C+ G A + M
Sbjct: 276 MYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDLTREM 335
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
LG +P+ + ++ LCQ+G A + + +KK+ P +S L+ L KN
Sbjct: 336 LGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCKNGMV 395
Query: 378 CKANTIMALVQR 389
+A + ++R
Sbjct: 396 QEARGLFDELER 407
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 42/304 (13%)
Query: 122 MMLYGKAGM--IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
++L G GM + A+ +M +G V + L DL+ Q ++
Sbjct: 209 ILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVAS 268
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK------ 233
+ D + +++ +C G L A +M EM+ GVKP+ +TY+ +I A K
Sbjct: 269 GR-RPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIE 327
Query: 234 -----------------------------DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
D + N +W MV K P+ + I
Sbjct: 328 ACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIY 387
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L +A L ++R G P +TYN +I G C +G L A +V+ M+ RR P
Sbjct: 388 WLCKNGMVQEARGLFDELER-GFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEP 446
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N Y+ +I C+ G N Y + K+ + K PS AL++ L ++P +T+
Sbjct: 447 NAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSL---SEPSHDDTVW 503
Query: 385 ALVQ 388
+V+
Sbjct: 504 TIVE 507
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 107/184 (58%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ IVI AFC+ G+LD A ++ EM++ + PD+ TY+TLI A K ++ E L+ M
Sbjct: 215 TYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM 274
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +PN+ TFN I L + + A ++M M G++PD +TYN++I G+ G +
Sbjct: 275 IHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQV 334
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A++++ +M+ + + P+ Y +I+ ++ + A +C++ +K PS+ T + L
Sbjct: 335 DRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVL 394
Query: 368 LEGL 371
L GL
Sbjct: 395 LHGL 398
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V S + LK + + ++ + E+ K I F +IV+ + C M D + V
Sbjct: 71 SVASFSKLLKAMVHMKHYSSVVSLFREI-HKLRIPVHEFILSIVVNSCCLMHRTDLGFSV 129
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLV 267
+ K G+ + +T+TTLI + +N+ + L+ +V + C PN + + L
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLC 189
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
K + +A L+ LM++ +P+ TY +VI FC+ G LD A + + M + + P+
Sbjct: 190 KKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF 249
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y T+I LC+ + + + + N P+V T +++++GL K + A IM
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D M K ++ + + L + L E+ +K I DI
Sbjct: 190 KKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQK-SIPPDI 248
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ +I A C++ + + +EM L + P+V T+ ++I K+ + E +
Sbjct: 249 FTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRY 308
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P++ T+N+ I + + +A ++ M IEPD ++YN++I G+ R
Sbjct: 309 MIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKK 368
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A +V + + L P+ ++H L + G A + + +P + T
Sbjct: 369 IDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCT 428
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHF 394
LL G KN LV+ + HF
Sbjct: 429 LLGGYFKN----------GLVEEAMSHF 446
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ DI S+NI+I + +D+A V E+ + G+KP ++T L+ ++ R +
Sbjct: 349 IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M+ G P+L T + +A ++R + + Y VI G
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G LD A + + L P+ Y MI CQEG + A M + +
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADN 528
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
T + ++ G ++N+ + + + + F + + I+++
Sbjct: 529 RTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ + L + ++ + + + EK + D+ ++N++I + G +D+A +
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMRYMIEK-GVDPDVITYNMIIDGYGLRGQVDRAREIF 341
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M ++PD+I+Y LI+ + + + + + + KG P++ T NV + L
Sbjct: 342 DSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFEL 401
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R+ A M G PD T+ ++ G+ ++G ++ A + + RR N +IY
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+I LC+ G + A+ + P V T +A++ G
Sbjct: 462 TAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + I AM ++ G K ++ + N L L E K+ Q F E+ HI
Sbjct: 363 YARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP- 421
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+++ ++ + + G++++A ++++ ++ YT +I K+ + + + +
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G P++ T+ I + +A ++ M+ G D TYN++++GF RS
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541
Query: 305 GHLDMAKKVYSAMLGR 320
+ K + G+
Sbjct: 542 NKVSEMKAFLEEIAGK 557
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A TF M K + NA + L ++ + Q LME+ + +
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN-GVNP 443
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +I A+ G L+K ++V+ EMQ+ G+KP+V++Y ++++AF K+ + +
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M K PN +N I V + QA L+ M+ GI P VTYNL+IKG C
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 563
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+++ +++ RL+P+ Y T+I C G+ + A + + K +V T
Sbjct: 564 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623
Query: 365 SALLEGL 371
L+ GL
Sbjct: 624 HQLISGL 630
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + N A++ + DL L + + FS+N+VI G
Sbjct: 159 GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 218
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V EM + V P+ ITY T+I K E G L + MVC G PN T+NV +
Sbjct: 219 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 278
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTY------------------------------ 294
L R + + L+ M + PD TY
Sbjct: 279 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338
Query: 295 -----NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
++++ G C+ G + +A++V +++ L+P R IY T+I+ CQ G+ A+
Sbjct: 339 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 398
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
++ P T +AL+ GL K + A ++ +Q
Sbjct: 399 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + ++ +I++ C+ G + A V+ + G+ P + Y TLI+ + + E
Sbjct: 333 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 392
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ M + P+ T+N I L R A L+ MQ G+ P T+N +I
Sbjct: 393 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 452
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+ R+G L+ V S M L PN Y ++++ C+ G A + D K+ +
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 512
Query: 359 PSVDTISALLE 369
P+ +A+++
Sbjct: 513 PNAQVYNAIID 523
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ C G + + ++ EM + PD TY+ L ++ + L+
Sbjct: 271 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 330
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G T ++ + L + A +++ + G+ P V YN +I G+C++G
Sbjct: 331 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 390
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A + M R + P+ Y +I+ LC+ A + + P+V+T +
Sbjct: 391 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 450
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L++ + Q K +++ +Q
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQE 473
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 1/244 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M +G K + N L L + + A L E+ + + D F+++I+ G
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP-DGFTYSILFDGLSRNG 319
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ + K GV T + L++ KD + I + +V G P +N
Sbjct: 320 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 379
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I A G M+ I+PD +TYN +I G C++ + A+ + M
Sbjct: 380 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 439
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ P + + T+I + G +I+ + + P+V + +++ KN + +A
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499
Query: 381 NTIM 384
I+
Sbjct: 500 VAIL 503
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G A+D F M K +V + + L + +L + E+ K I+ D+
Sbjct: 221 KSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK-GIKADV 279
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C G D ++ EM + P+V+T++ LI F K+ + L+N
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +G P+ T++ I + R +AN+++ LM G EP+ VTY+++I +C++
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D +++ + + L+ + Y T++ CQ G N+A + ++ + + PSV T
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +Q+
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQK 482
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 125/245 (51%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F +M + G K V + ++ + L L E+ + +I ++
Sbjct: 256 KDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR-NIIPNV 314
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+ +I F + G L +A + EM G+ PD ITY++LI F K+NR N + +L
Sbjct: 315 VTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDL 374
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC PN+ T+++ I +R +L + G+ D VTYN +++GFC+SG
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGK 434
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L++AK+++ M+ R + P+ Y ++ LC G+ A + + K + + +
Sbjct: 435 LNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNI 494
Query: 367 LLEGL 371
++ G+
Sbjct: 495 IIHGM 499
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++++ NI+I FC L A+ V+ K G +P+ IT++TLI+ F + R
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV PN+ T N I L K R +A L+ M ++G E +E+TY V+
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+SG+ +A ++ M R + + Y +I LC++G+ + A + + K V
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279
Query: 362 DTISALLEGL 371
S+++ GL
Sbjct: 280 VAYSSIIGGL 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I FC+ L +A ++ M G +P+++TY+ LI+++ K R + G L+
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG + T+N +Q + A +L M G+ P VTY +++ G C +
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDN 467
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDT 363
G L A +++ M R++ IY +IH +C + A+ + C S+ K P V T
Sbjct: 468 GELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV-KGVKPDVLT 526
Query: 364 ISALLEGLKKNNQPCKANTI 383
+ ++ GL K +A+ +
Sbjct: 527 YNVMIGGLCKKGSLSEADML 546
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 3/242 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M L G + + ++N + R K + AF ++ KF + + +F+ +I FC
Sbjct: 94 EMDLNGIEHNMYTMNIMINCFCRKR--KLLFAFSVVGRALKFGFEPNTITFSTLINGFCL 151
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G + +A ++ M ++ +P+V+T TLI+ R L + MV GC N T
Sbjct: 152 EGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEIT 211
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ + + + A L M+ I+ V Y++VI C+ G+LD A +++ M
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEME 271
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
+ + + Y ++I LC +G ++ M ++ + +N +P+V T SAL++ K +
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 379 KA 380
+A
Sbjct: 332 EA 333
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + N +I C G + +A +++ M K G + + ITY +++ K + L+
Sbjct: 173 NVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLF 232
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + ++ +++ I L A L M+ GI+ D V Y+ +I G C
Sbjct: 233 RKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCND 292
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+GR ++PN + +I +EG A + + + + P T
Sbjct: 293 GRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITY 352
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
S+L++G K N+ +AN ++ L+
Sbjct: 353 SSLIDGFCKENRLGEANQMLDLM 375
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 92/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +++I+I ++C+ +D + E+ G+ D +TY TL+ F + + + L+
Sbjct: 383 NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELF 442
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G P++ T+ + + L + +A ++ MQ+ + YN++I G C +
Sbjct: 443 QEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNA 502
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P+ Y MI LC++G + A ++ + + PS T
Sbjct: 503 SKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTY 562
Query: 365 SALL 368
+ L+
Sbjct: 563 NILI 566
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 42/255 (16%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ M YGC+ + L + +S + A+ L E+ I+ +
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN-TALALDLFRKMEERSIKASVVQ 246
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++IVI + C+ G LD A + EM+ G+K DV+ Y+++I D R + G + M+
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ PN+ VT++ +I F + G L
Sbjct: 307 GRNIIPNV-----------------------------------VTFSALIDVFVKEGKLL 331
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AK++Y+ M+ R + P+ Y ++I C+E A M + K P++ T S L+
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 369 EGLKKNNQPCKANTI 383
N CKA +
Sbjct: 392 ------NSYCKAKRV 400
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + + +++ + E+ K + D ++N +++ FC+ G L+
Sbjct: 379 GCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA-DTVTYNTLVQGFCQSGKLNV 437
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM GV P V+TY L+ + + ++ M + +N+ I
Sbjct: 438 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIH 497
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ N + A L + G++PD +TYN++I G C+ G L A ++ M P
Sbjct: 498 GMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAP 557
Query: 325 NRKIYQTMIH 334
+ Y +I
Sbjct: 558 SDCTYNILIR 567
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +I ++ L SA + ++ G M G N+ T N+ I KR+ A +
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G +FG EP+ +T++ +I GFC G + A + M+ + PN T+I+ LC
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMAL 386
+G A ++ +K + T +L N+ CK+ NT +AL
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVL------NRMCKSGNTALAL 229
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K +K A++ + +M G V + + L ++ ++ + + FL+++ F +
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS-FGVVP 331
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF +N +I +C+ G L +A + E++K + PDV TY+ LI +R E +GL
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG PN T+N I + +A ++ M GIEP+ +T++ +I G+C++
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A +Y+ M+ + L+P+ Y +I ++G+ A+ + K+ + P+V T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 365 SALLEGLKKNNQ 376
S L++GL K+ +
Sbjct: 512 SCLIDGLCKDGR 523
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 14/259 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG + A+ ++ + V + + +K L ++ L E+ +K +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP- 401
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I +C+ G ++KA V +M + G++P++IT++TLI + K + E GL+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KG P++ + I + +A +L MQ G+ P+ T + +I G C+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 305 GHLDMAKKVYSAMLG------------RRLM-PNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G + A K++ A G R L PN +Y +I LC +G A D
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581
Query: 352 SMKKNWVPSVDTISALLEG 370
P V T +++G
Sbjct: 582 MRCSGLRPDVFTCIVIIQG 600
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F I+I C+ + A +++M GV P++ Y LI + K L
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + P++ T+++ I+ L R +A+ L+ M++ G P+ VTYN +I G+C+
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+++ A +V S M + + PN + T+I C+ G A + + + K +P V
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 365 SALLEGLKKNNQPCKA 380
+AL++G K+ +A
Sbjct: 477 TALIDGHFKDGNTKEA 492
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N+V+ + G D + V +M G P+V+TY TLI + L++ M+
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K FP + + + I+ L + R +A + M+ G+ P+ TYN ++ G+C+ H+
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A ++Y MLG L+PN + +I LC+ + A D VP++ + L++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 370 GLKKNNQPCKANTIMALVQR 389
G K +A ++ + +++
Sbjct: 342 GYCKAGNLSEALSLHSEIEK 361
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
LKA + F + +K I++ I+I+ C + +A + M+ G+ P++ TY
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYT--ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
T++ + K + L+ M+ G PN+ TF + I L A K + M F
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+ P+ YN +I G+C++G+L A ++S + ++P+ Y +I LC A
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ ++ KK ++P+ T + L++G K KA
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKA 422
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F ++I AF EMG++++A V +M L P + ++ K R + ++ MV
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ T+ I + +A +L M I P V Y ++I+G C +
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ ++ M ++PN Y TM+ C+ A + ++ + +P+V T L+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305
Query: 369 EGLKKNNQPCKA 380
+GL K ++ A
Sbjct: 306 DGLCKTDEMVSA 317
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 119/278 (42%), Gaps = 30/278 (10%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML------YGKAG 129
++ + + + + L G R + + LL+ K ++GF+ + Y K G
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMK------KKGFLPNAVTYNTLIDGYCKEG 417
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ A++ M G + + + + + ++ ++A E+ K + D+ ++
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP-DVVAY 476
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I + G +A+ + EMQ+ G+ P+V T + LI KD R I + + +
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR--ISDAIKLFLAK 534
Query: 250 KG---------------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
G C PN + IQ L R ++A+K M+ G+ PD T
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
++I+G R+ HL + + +L ++PN +Y+ +
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
Y KAG ++ AM + +M + G V + A + +D +AF L + ++ +
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID--GHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 184 FDIFSFNIVIKAFCEMGILDKA---YLVMVEMQKLGVK----------PDVITYTTLISA 230
++F+ + +I C+ G + A +L G K P+ + YT LI
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
D R + ++ M C G P++ T V IQ L + + GI P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
Y ++ KG+ SG+L A + + G
Sbjct: 626 SSVYRVLAKGYEESGYLKSALRCSEDLSG 654
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G A+D F M K +V + + L + + E+ K I+ D+
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADV 280
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C G D ++ EM + PDV+T++ LI F K+ + L+N
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G P+ T+N I + +AN++ LM G EPD VTY+++I +C++
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D +++ + + L+PN Y T++ CQ G N A + ++ + + PSV T
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +Q+
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQK 483
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+++ I+I +C L A+ V+ KLG +PD IT++TL++ F + R
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV P+L T + I L K R +A L+ M +G +PDEVTY V+
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+SG+ +A ++ M R + + Y +I LC++G F+ A + + K V
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 362 DTISALLEGL 371
T S+L+ GL
Sbjct: 281 VTYSSLIGGL 290
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I FC+ L +A + M G +PD++TY+ LI+++ K R + G L+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG PN T+N + + A +L M G+ P VTY +++ G C +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A +++ M R+ IY +IH +C + A+ + K P V T
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 365 SALLEGLKKNNQPCKANTI 383
+ ++ GL K +A+ +
Sbjct: 529 NVMIGGLCKKGSLSEADML 547
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + D +F+ ++ FC G + +A ++ M ++ +PD++T +TLI+ R
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV G P+ T+ + L S A L M+ I+ V Y++VI
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ G D A +++ M + + + Y ++I LC +G ++ M ++ + +N +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P V T SAL++ K + +A
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEA 334
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +++I+I ++C+ +D + E+ G+ P+ ITY TL+ F + + L+
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G P++ T+ + + L + +A ++ MQ+ + YN++I G C +
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P+ Y MI LC++G + A ++ + + P T
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 365 SALL 368
+ L+
Sbjct: 564 NILI 567
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + + +I C G + +A +++ M + G +PD +TY +++ K + L+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + ++ +++ I L A L M+ GI+ D VTY+ +I G C
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+GR ++P+ + +I +EG A + + + + P T
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L++G K N +AN + L+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLM 376
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
++ Q D ++ V+ C+ G A + +M++ +K V+ Y+ +I + KD +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L+N M KG ++ T++ I L N + K++ M I PD VT++ +I
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F + G L AK++Y+ M+ R + P+ Y ++I C+E + A M + K
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P + T S L+ N CKA +
Sbjct: 383 PDIVTYSILI------NSYCKAKRV 401
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 133 HAMDTFYDMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
H + +D+ + GC+ + + + + +++ + E+ K I + ++N
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNT 425
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ FC+ G L+ A + EM GV P V+TY L+ + ++ M
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
+ +N+ I + N + A L + G++PD VTYN++I G C+ G L A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 312 KVYSAMLGRRLMPNRKIYQTMIH 334
++ M P+ Y +I
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIR 568
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P I + L SA + + ++ G M G ++ T + I K++ A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G + G EPD +T++ ++ GFC G + A + M+ + P+ T+I+ LC
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMAL 386
+G + A ++ ++ + P T +L N+ CK+ N+ +AL
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVL------NRLCKSGNSALAL 230
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 187/438 (42%), Gaps = 67/438 (15%)
Query: 28 RAVSLNKFPNREPL-VDKPLEP-----PALVK------------------LKAERDPEKL 63
R S + P PL KPLEP P +V +K E+DP+
Sbjct: 90 RVPSASSLPWISPLNFTKPLEPKLDPPPEIVVAETRKKSKYITHDVAINLIKREKDPQHA 149
Query: 64 FQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-REGFIMRIM 122
++F + + N + + +LA ++F ++ +L HQ + + EG + +M
Sbjct: 150 LKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVL-HQMTYEACKFHEGVFINLM 208
Query: 123 MLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
Y K G + D F + + K + K++++ L +L +S + ++ L+
Sbjct: 209 KHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLV 268
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ---------------------------- 213
+ ++ FNI++K C G +D A+ V+ EM+
Sbjct: 269 YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEA 328
Query: 214 ---------KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
K + PD +TY LI+ F ++ + + + M GC PN+ ++ +
Sbjct: 329 FELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVD 388
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + A ++ M+ G++PD +TY +I F R+G +D A ++ + M
Sbjct: 389 GLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQA 448
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + ++ LC+EG F+ A M + ++ + + +L L +N + KAN ++
Sbjct: 449 DTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLL 508
Query: 385 ALVQRR--VPHF-SSNQL 399
L+ R VPH+ +SN+L
Sbjct: 509 GLMLSRGFVPHYATSNEL 526
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 93/185 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+++ ++ C+ G L A V+ EM+ G+KPD ITYT+LI+ F ++ + + L
Sbjct: 379 NVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELL 438
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C + TFNV + L + R +A ++ + + G+ ++ +Y +V+ ++
Sbjct: 439 TEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQN 498
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A K+ ML R +P+ ++ LC+EG N A D + + P D+
Sbjct: 499 CELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSW 558
Query: 365 SALLE 369
L++
Sbjct: 559 ELLID 563
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ A +M G K + + + + + + L E+ E Q D
Sbjct: 392 KAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKEN-DCQADT 450
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ C G D+A ++ ++ + GV + +Y ++++ ++ N L L
Sbjct: 451 VTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGL 510
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G P+ AT N + L + + A + + G +P ++ L+I CR
Sbjct: 511 MLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRK 570
Query: 307 L 307
L
Sbjct: 571 L 571
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + A + ++H YG K + N L +L + + E E + +
Sbjct: 154 YARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVP- 212
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++SFNI+I+ C +G +DKA+ M G PD+++Y TLI+ F + N G+ L
Sbjct: 213 DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272
Query: 245 NL-MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ KG P++ T+ I A++L M GI+P++ T+N++I GF +
Sbjct: 273 KEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGK 332
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G++ A +Y ML +P+ + ++I C+EG+ N + ++ +N P+V T
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 364 ISALLEGLKKNNQ 376
+ L+ L K N+
Sbjct: 393 YAVLINALCKENR 405
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM + G V + + + + D+KA E+ I+ + F+FN++I F ++
Sbjct: 275 DMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS-GIKPNDFTFNVLIDGFGKV 333
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + A ++ +M LG PDV+T+T+LI + ++ G LW M + PN+ T+
Sbjct: 334 GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTY 393
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
V I L + R +A + ++ + P YN VI GFC++G +D A + + M
Sbjct: 394 AVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE 453
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
++ P++ + +I C +G A ++ N VP TI++L+ L K P +
Sbjct: 454 KKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNE 513
Query: 380 ANTI 383
A+ I
Sbjct: 514 ASQI 517
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 31/279 (11%)
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
R F R ++ + +A ++K F+ H SLNA L SR+L AF
Sbjct: 32 RARPFCDREIIRHSEAWLVKVVCTLFFRSH---------SLNACFGYL--SRNLNPSIAF 80
Query: 173 LMEVPEKFH-----IQFDIFS------------FNIVIKAFCEMGILDKAYLVMVEMQKL 215
EV ++F ++F FS ++++++ C++G+ D A +V M+
Sbjct: 81 --EVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSD 138
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ PD L+S++ + + + N + C G + +N + LV + +A
Sbjct: 139 GILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEA 198
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L PD ++N++I+G CR G +D A + + M P+ Y T+I+
Sbjct: 199 VLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLING 258
Query: 336 LCQEGDFNLAYIMCKDSMK-KNWVPSVDTISALLEGLKK 373
C+ + + + + K+ M K P V T ++++ G K
Sbjct: 259 FCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCK 297
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+GK G ++ AM + M L GC V + + + R+ + Q L E + ++
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID--GYCREGEVNQGLKLWEEMKVRNLS 387
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+++++ ++I A C+ + +A + ++ V P Y +I F K + + N +
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M K C P+ TF + I K R +A M PDE+T N +I +
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507
Query: 304 SGHLDMAKKVYSAMLGR 320
+G + A ++ A L +
Sbjct: 508 AGMPNEASQIKQAALQK 524
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A TF M K + NA + L ++ + Q LME+ + +
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN-GVNP 439
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +I A+ G L+K ++V+ EMQ+ G+KP+V++Y ++++AF K+ + +
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M K PN +N I V + QA L+ M+ GI P VTYNL+IKG C
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 559
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+++ +++ RL+P+ Y T+I C G+ + A + + K +V T
Sbjct: 560 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 619
Query: 365 SALLEGL 371
L+ GL
Sbjct: 620 HQLISGL 626
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + N A++ + DL L + + FS+N+VI G
Sbjct: 155 GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 214
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V EM + V P+ ITY T+I K E G L + MVC G PN T+NV +
Sbjct: 215 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS 274
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTY------------------------------ 294
L R + + L+ M + PD TY
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334
Query: 295 -----NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
++++ G C+ G + +A++V +++ L+P R IY T+I+ CQ G+ A+
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
++ P T +AL+ GL K + A ++ +Q
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + ++ +I++ C+ G + A V+ + G+ P + Y TLI+ + + E
Sbjct: 329 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ M + P+ T+N I L R A L+ MQ G+ P T+N +I
Sbjct: 389 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 448
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+ R+G L+ V S M L PN Y ++++ C+ G A + D K+ +
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 508
Query: 359 PSVDTISALLE 369
P+ +A+++
Sbjct: 509 PNAQVYNAIID 519
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ C G + + ++ EM + PD TY+ L ++ + L+
Sbjct: 267 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 326
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G T ++ + L + A +++ + G+ P V YN +I G+C++G
Sbjct: 327 SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 386
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A + M R + P+ Y +I+ LC+ A + + P+V+T +
Sbjct: 387 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 446
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L++ + Q K +++ +Q
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQE 469
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ M +G K + N L L + + A L E+ + + D
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP-DG 301
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++I+ G + + K GV T + L++ KD + I +
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+V G P +N I A G M+ I+PD +TYN +I G C++
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A+ + M + P + + T+I + G +I+ + + P+V + +
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481
Query: 367 LLEGLKKNNQPCKANTIM 384
++ KN + +A I+
Sbjct: 482 IVNAFCKNGKIPEAVAIL 499
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 40/284 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD---LKAIQAFLMEVPEKFH 181
Y MI A++T G V S N+ L + SR L A + + + +
Sbjct: 152 YSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSR-- 209
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ +++++NI+I+ FC +G L K EM++ G P+V+TY TLI A+ K R +
Sbjct: 210 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 269
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL M KG PNL ++NV I L + +A +++ M G PDEVTYN ++ G+
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 329
Query: 302 CRSG--------HLDMAKK-------VYSAMLG--------------------RRLMPNR 326
C+ G H +M + Y+A++ R L PN
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ Y T+I ++G N AY + + + + PSV T +A + G
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A+ +M G +V + A + + ++R+L F ++ + ++
Sbjct: 329 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR-GLRP 387
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++ +I F G+L++AY ++ EM + G P V+TY I R E G+
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KG P++ +++ I K +A ++ M G+ PD VTY+ +I+G C
Sbjct: 448 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A + ML L P+ Y T+I+ C EGD N A + + + K ++P T
Sbjct: 508 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K + +A ++
Sbjct: 568 SVLINGLNKQARTREAKRLL 587
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I A M G + + S N + L +K L E+ K
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP- 317
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N ++ +C+ G +A ++ EM + GV P V+TYT LI++ K +
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ I + +A +++ M G P VTYN I G C
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A V M+ + L P+ Y T+I C++G+ + A+ M ++ ++K P T
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497
Query: 365 SALLEGL 371
S+L++GL
Sbjct: 498 SSLIQGL 504
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CEM L +A + EM +G+ PD TYTTLI+A+ + L
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLH 552
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI------ 298
+ M+ KG P+ T++V I L + R+ +A +L+ + P +VTY+ +I
Sbjct: 553 DEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 612
Query: 299 ---------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
KGFC G + A +V+ +M+ R P +Y +IH C+ G+ A+ +
Sbjct: 613 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY 672
Query: 350 KDSMKKNWVPSVDTISALLEGLKK 373
K+ + +VP T+ L++ L K
Sbjct: 673 KEMIHSGFVPHTVTVITLIKALFK 696
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI---GNGLWN 245
F++++K++ + ++D+A + + G P V++Y +++ A + +R + ++
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVR-SRGSVKLSAEEVYR 203
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ PN+ T+N+ I+ + + G M+R G P+ VTYN +I +C+ G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A + +M + + PN Y +I+ LC+EG A+ + ++ K + P T +
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323
Query: 366 ALLEGLKKNNQPCKANTIMALVQR 389
LL G K +A I A + R
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVR 347
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
++ LTE+ DL + M +P D F++ +I A+C G L+KA + EM G
Sbjct: 507 MRRLTEACDLSQ-EMLDMGLPP------DEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN-------- 268
PD +TY+ LI+ K R L ++ + P+ T++ I++ N
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 619
Query: 269 -------KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
K +A+++ M +P E YN++I G CR G+L A +Y M+
Sbjct: 620 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679
Query: 322 LMPNRKIYQTMIHYLCQEG 340
+P+ T+I L +EG
Sbjct: 680 FVPHTVTVITLIKALFKEG 698
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 38/381 (9%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P ++KL K+E++P F LF + + + + + RL+ R +++ +
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLT 161
+E +S E + ++ YGK M A+D F M ++GC+ ++S N L
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 162 ESRDLKAIQAF----------------------------------LMEVPEKFHIQFDIF 187
E++ +++ ++ K + D+F
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN-L 246
S++ VI + G LD A + EM + GV PDV Y LI F K+ + LW+ L
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +PN+ T N+ I L R K+ M++ E D TY+ +I G C +G+
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A+ V++ + R+ + Y TM+ C+ G + + + KN V V + +
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV-SYNI 364
Query: 367 LLEGLKKNNQPCKANTIMALV 387
L++GL +N + +A I L+
Sbjct: 365 LIKGLLENGKIDEATMIWRLM 385
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+M+ E D++++ +I C+ L++A ++ EM K GV+ + LI
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+D+R + M GC P + ++N+ I L + +A+ + M G +PD
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY++++ G CR +D+A +++ L L + ++ +IH LC G + A + +
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+N ++ T + L+EG K +A I + +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 2/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G IK +++ + M + + S N +K L E+ + +P K +
Sbjct: 335 FCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA- 392
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ I I C G ++KA VM E++ G DV Y ++I K R E + L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G N N I L+ R +A+ + M + G P V+YN++I G C++
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ML P+ K Y ++ LC++ +LA + ++ V
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+ GL + A T+MA ++ R
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHR 598
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A + +M +G + NA + L L FL E+ K + + S+N
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG-KNGCRPTVVSYN 503
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I C+ G +A + EM + G KPD+ TY+ L+ +D + ++ LW+ +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G ++ N+ I L + + A +M M+ + VTYN +++GF + G + A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M L P+ Y T++ LC + A D+ P+V T + L+
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Query: 371 L 371
+
Sbjct: 684 V 684
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 139/344 (40%), Gaps = 26/344 (7%)
Query: 20 DAIALNNIRAVSLNKFPNREPLVDKPLEP-----PALVKLKAERDPEKLFQLFKANAHNR 74
+ +AL+ I+ N P++ V K + PA+ R L F A
Sbjct: 78 EDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAI------RSYNTLLNAF-VEAKQW 130
Query: 75 IVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-------REGF------IMRI 121
+ +E+ +A+ +T + ++ + + +K + R +EGF +
Sbjct: 131 VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTV 190
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ KAG + A++ F +M G V N + + +D K + E
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSS 250
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ ++ + NI+I + G +D + M++ + D+ TY++LI +
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N + + ++ T+N + + ++ +L +M+ + V+YN++IKG
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGL 369
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+G +D A ++ M + ++ Y IH LC G N A
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 42/181 (23%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQ 183
KAG A +M G K +K+ + L L R + +E+ +F ++
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID----LALELWHQFLQSGLE 566
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ NI+I C +G LD A VM M+ +++TY TL+ F+K +
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 244 WNLM--------------------VCKGC---------------FPNLATFNVRIQHLVN 268
W M +C+G FP + T+N+ ++ +VN
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Query: 269 K 269
+
Sbjct: 687 R 687
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 106/196 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I A C++G +D A L +M GV P+++ +T+L+ ++ E L+
Sbjct: 413 NVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELF 472
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G PN+ FN + +L + R +A +L+ LM+R G PD ++YN +I+G C
Sbjct: 473 FEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLV 532
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A K+ ML L PN Y T++H C++G + AY + ++ + P V T
Sbjct: 533 GKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTY 592
Query: 365 SALLEGLKKNNQPCKA 380
+ +L GL K + +A
Sbjct: 593 NTILHGLFKTRRFSEA 608
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 141 MHLYGCKRTVKSLNAALK-VLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCE 198
M GC V S N LK E+R +A++ +M + ++ S+N VI F
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFT 216
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G +DKAY + ++M G+ P+V+TYT +I K + G++ M+ KG PN+ T
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ I ++ + + +++ M G+EPD TY L++ C+ G A+K++ +M+
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI 336
Query: 319 GRRLMPNRKIYQTMIHYLCQEG 340
+ + P+ IY ++H +G
Sbjct: 337 RKGIKPDVSIYGIILHGYATKG 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 40/246 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAY-------------------------------------L 207
D+F+++I++ FC MG L+ + +
Sbjct: 93 DVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGV 152
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV---CKGCFPNLATFNVRIQ 264
++ M +LG P+V++Y TL+ F +NR E L ++M + C PNL ++N I
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + +A L M GI P+ VTY +VI G C++ +D A+ V+ M+ + + P
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N Y +IH G + M K+ P T LL+ L K + +A +
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332
Query: 385 ALVQRR 390
+ R+
Sbjct: 333 DSMIRK 338
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 5/272 (1%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIK--HAMDTFYDMHLYGCKRTVKSLNAAL-KV 159
L+ + + +G ++ ++YG + K A + F++M G V N + +
Sbjct: 435 LKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNL 494
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
TE R +KA + L+++ E+ + DI S+N +I+ C +G D+A ++ M +G+KP
Sbjct: 495 CTEGRVMKAQR--LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ TY TL+ + +D R + ++ M+ G P + T+N + L RR +A +L
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M G + TYN+++ G ++ +D A K++ ++ + L + + MI L ++
Sbjct: 613 LNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKD 672
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
G A + VP V T + E L
Sbjct: 673 GRKEDAMNLFATISANGLVPDVTTYRLIAENL 704
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A + F DM G V + + L +++ + + ++ +K ++ +I +
Sbjct: 218 GQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK-GVRPNIVT 276
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I + +G + ++ EM G++PD TY L+ K + L++ M+
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI 336
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P+++ + + + K + + + LM GI P+ +N+V F + +
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIG 396
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M + L PN Y T+I LC+ G + A + + + P++ ++L+
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456
Query: 369 EGL 371
GL
Sbjct: 457 YGL 459
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV---MVEMQ 213
LK L +++ + L+ + ++ S+N ++K FC+ ++A + M + Q
Sbjct: 137 LKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQ 196
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
P++++Y T+I+ F+ + + + L+ M +G PN+ T+ + I L +
Sbjct: 197 VRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVD 256
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A + M G+ P+ VTY +I G+ G ++ M L P+ Y ++
Sbjct: 257 RAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLL 316
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
YLC++G A + ++K P V +L G
Sbjct: 317 DYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHG 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 98/221 (44%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ +C G +D AY V EM G+ P V+TY T++ +K R L+ M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G ++ T+N+ + L +A K+ + ++ D +T+N++I + G
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A +++ + L+P+ Y+ + L +EG M + K P+ ++ L
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
+ L +A ++ + + ++ S S+ S+
Sbjct: 736 VRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSR 776
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR-IQHLVNKRRSWQA 275
V PDV TY+ L+ F + R E G + L++ G N R ++ L + +R +A
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 276 -NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG---RRLMPNRKIYQT 331
L+ M G P+ V+YN ++KGFC + A ++ M R PN Y T
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+I+ EG + AY + D + P+V T + +++GL CKA +
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGL------CKAQVV 255
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G I A F +M G V + N L L ++R + + + Q+
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK-QW 622
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I+++NI++ + +D+A + + ++ D+IT+ +I A KD R E L+
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLF 682
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G P++ T+ + ++L+ + + + + M++ G P+ + N +++
Sbjct: 683 ATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLR 742
Query: 305 GHLDMAKKVYS 315
G + A S
Sbjct: 743 GDISRAGAYLS 753
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
Q+ L G + +L+G K A + + +M G + ++ + N L L+++
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKN 637
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ + K +Q DI +FNI+I A + G + A + + G+ PDV T
Sbjct: 638 NCVDEALKMFQSLCSK-DLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTT 696
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y + ++ E +G+++ M GC PN N ++ L+ + +A + +
Sbjct: 697 YRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKID 756
Query: 284 RFGIEPDEVTYNLVIKGFCRSGH 306
+ T +++I F R H
Sbjct: 757 EKNFSLEASTTSMLISLFSREEH 779
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I ++F++N +I FC G +A ++ EM + + PDV+T++ LI+
Sbjct: 268 QNLFSEMQEK-GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
A K+ + L+N M+ +G PN T+N I + R A ++ LM G P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D +T++++I G+C + +D K+ M R L+ N Y T+IH CQ G+ N A +
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQ 376
++ + P+V T + LL+GL N +
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGK 473
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F+I+I +C +D ++ EM + G+ + ITYTTLI F + L
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF-----------GIEPDEVT 293
M+ G PN+ T N + L N + A ++ +MQ+ +EPD T
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQT 506
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
YN++I G G A+++Y M R L+P+ Y ++I LC++ + A M
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 354 KKNWVPSVDTISALLEGLKK 373
K + P V T + L+ G K
Sbjct: 567 SKGFSPDVVTFTTLINGYCK 586
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 123/296 (41%), Gaps = 47/296 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A + F +M G + + N + S Q L E+ E+ + D+
Sbjct: 260 KDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER-KMSPDV 318
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+++I A + G +A + EM G+ P+ ITY ++I F K NR + ++ L
Sbjct: 319 VTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGC P++ TF++ I +R KL+ M R G+ + +TY +I GFC+ G+
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ---------------------------- 338
L+ A + M+ + PN T++ LC
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 339 ------------------EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
EG F+ A + ++ + VP T +++++GL K ++
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 4/227 (1%)
Query: 146 CKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
CK V + + L E R ++A+ A L + E +Q + ++ ++ C+MG
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAV-ALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVS 230
Query: 205 AYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ +M+++ +KP+V+ Y+ +I +KD R L++ M KG PNL T+N I
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ R +A +L+ M + PD VT++++I + G A+++Y+ ML R ++
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGII 350
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
PN Y +MI ++ + A M K P V T S L++G
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG 397
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 55/340 (16%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
F ++ L +F E L + + LP+G I M+ G K + A FY
Sbjct: 320 TFSVLINALVKEGKFFEAEEL--YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY 377
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M GC V + + + ++ + L E+ + + + ++ +I FC++
Sbjct: 378 LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA-NTITYTTLIHGFCQL 436
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAF---------------------------- 231
G L+ A ++ EM GV P+V+T TL+
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496
Query: 232 YKDNRPEIGNGLWNLMVC--------------------KGCFPNLATFNVRIQHLVNKRR 271
+ D P++ +N+++C +G P+ T+N I L + R
Sbjct: 497 FNDVEPDVQT--YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A ++ M G PD VT+ +I G+C+ G + +V+ M R ++ N Y+T
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+IH CQ G+ N A + ++ + P TI +L GL
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-DNRPEIGNGL 243
++ +F ++ C G + +A ++ M + G++P+ ITY T++ K + N L
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ PN+ ++ I L R A L MQ GI P+ TYN +I GFC
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG A+++ M R++ P+ + +I+ L +EG F A + + + + +P+ T
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355
Query: 364 ISALLEGLKKNNQ 376
+++++G K N+
Sbjct: 356 YNSMIDGFSKQNR 368
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 18/288 (6%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
E++F L + VI F + GA+R D LL H+ S +G I
Sbjct: 373 ERMFYLMATKGCSPDVI----TFSILIDGYCGAKRVDDGMKLL-HEMS-RRGLVANTITY 426
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVP 177
+++G + G + A+D +M G V + N L L + LK A++ F +
Sbjct: 427 TTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486
Query: 178 EKFH---------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
K ++ D+ ++NI+I G +A + EM G+ PD ITY ++I
Sbjct: 487 SKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI 546
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
K +R + +++ M KG P++ TF I R ++ M R GI
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV 606
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ +TY +I GFC+ G+++ A ++ M+ + P+ + M+ L
Sbjct: 607 ANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 40/235 (17%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I +I+SF I+IK FC L A ++ KLG P ++T++TL+ ++R
Sbjct: 103 EMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRV 162
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
++ +CK PN+ F + L + R +A L+ M G++P+++TY +
Sbjct: 163 SEALHFFH-QICK---PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218
Query: 298 IKGFCRSGH----LDMAKK------------VYSAML------GRR-------------- 321
+ G C+ G L++ +K +YSA++ GR+
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ PN Y MI+ C G ++ A + ++ ++ P V T S L+ L K +
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 38/232 (16%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ LD A + M + P VI + L+ + RP++ L M +
Sbjct: 49 SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI--------------- 298
N+ +F + I+ + + A G + + G P VT++ ++
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168
Query: 299 ----------------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD- 341
G CR G + A + M+ L PN+ Y T++ +C+ GD
Sbjct: 169 FHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 228
Query: 342 ---FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
NL M + S K P+V SA+++GL K+ + A + + +Q +
Sbjct: 229 VSALNLLRKMEEVSRIK---PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + A + ++H YG K + N L +L + + E E + +
Sbjct: 154 YARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVP- 212
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++SFNI+I+ C +G +DKA+ M G PD+++Y TLI+ F + N G+ L
Sbjct: 213 DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272
Query: 245 NL-MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ KG P++ T+ I A++L M GI+P++ T+N++I GF +
Sbjct: 273 KEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGK 332
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G++ A +Y ML +P+ + ++I C+EG+ N + ++ +N P+V T
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 364 ISALLEGLKKNNQ 376
+ L+ L K N+
Sbjct: 393 YAVLINALCKENR 405
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM + G V + + + + D+KA E+ I+ + F+FN++I F ++
Sbjct: 275 DMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS-GIKPNDFTFNVLIDGFGKV 333
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + A ++ +M LG PDV+T+T+LI + ++ G LW M + PN+ T+
Sbjct: 334 GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTY 393
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
V I L + R +A + ++ + P YN VI GFC++G +D A + + M
Sbjct: 394 AVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE 453
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
++ P++ + +I C +G A ++ N VP TI++L+ L K P +
Sbjct: 454 KKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNE 513
Query: 380 ANTI 383
A+ I
Sbjct: 514 ASQI 517
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 31/279 (11%)
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
R F R ++ + +A ++K F+ H SLNA L SR+L AF
Sbjct: 32 RARPFCDREIIRHSEAWLVKVVCTLFFRSH---------SLNACFGYL--SRNLNPSIAF 80
Query: 173 LMEVPEKFH-----IQFDIFS------------FNIVIKAFCEMGILDKAYLVMVEMQKL 215
EV ++F ++F FS ++++++ C++G+ D A +V M+
Sbjct: 81 --EVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSD 138
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ PD L+S++ + + + N + C G + +N + LV + +A
Sbjct: 139 GILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEA 198
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L PD ++N++I+G CR G +D A + + M P+ Y T+I+
Sbjct: 199 VLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLING 258
Query: 336 LCQEGDFNLAYIMCKDSMK-KNWVPSVDTISALLEGLKK 373
C+ + + + + K+ M K P V T ++++ G K
Sbjct: 259 FCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCK 297
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+GK G ++ AM + M L GC V + + + R+ + Q L E + ++
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLID--GYCREGEVNQGLKLWEEMKVRNLS 387
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+++++ ++I A C+ + +A + ++ V P Y +I F K + + N +
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M K C P+ TF + I K R +A M PDE+T N +I +
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507
Query: 304 SGHLDMAKKVYSAMLGR 320
+G + A ++ A L +
Sbjct: 508 AGMPNEASQIKQAALQK 524
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 113/206 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +N +I C+ ++++AY EM G+ PDVITY+TLI F + L
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLL 330
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M K P++ T+ + I L + + +A L+G+M + G++P+ VTY+ ++ G+C
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV 390
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + AK+++ AM+ + P+ Y MI+ LC+ + A + ++ + KN VP+ T
Sbjct: 391 GEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTY 450
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
++L++GL K+ + A +M + R
Sbjct: 451 NSLIDGLCKSGRITSALDLMKELHHR 476
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 1/248 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A D + +M+ G V + + + + L + L E+ K +I D+
Sbjct: 284 KDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK-NINPDV 342
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ I+I A C+ G L +A ++ M K GVKP+V+TY+TL+ + +++
Sbjct: 343 YTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHA 402
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV P++ ++N+ I L + +A L+ M + P+ VTYN +I G C+SG
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + + R + Y +++ LC+ + + A + ++ P+ T +A
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522
Query: 367 LLEGLKKN 374
L++GL K
Sbjct: 523 LIDGLCKG 530
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ + +I+I FC +G + ++ V+ ++ KLG +P+ I TTL+ +
Sbjct: 163 IEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSL 222
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ +V +G N ++ + L + A KL+ +++ PD V YN +I G
Sbjct: 223 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ ++ A Y+ M R + P+ Y T+I C G A+ + + KN P V
Sbjct: 283 CKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDV 342
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
T + L++ L K + +A ++ ++ +
Sbjct: 343 YTYTILIDALCKEGKLKEAKNLLGVMTKE 371
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ S+NI+I C+ +D+A ++ EM V P+ +TY +LI K R L
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G ++ T+ + L + +A L M+ GI+P++ TY +I G C+
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN-WVPSVDT 363
L A+K++ +L + + Y MI LC+EG + A M K M+ N +P T
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM-KSKMEDNGCIPDAVT 589
Query: 364 ISALLEGLKKNNQPCKANTIM-ALVQRRVPHF 394
++ L + ++ KA ++ ++ + + HF
Sbjct: 590 FEIIIRSLFEKDENDKAEKLLHEMIAKGLLHF 621
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ ++ C+ LDKA + ++M++ G++P+ TYT LI K R + L+
Sbjct: 481 DVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLF 540
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KGC ++ T+NV I L + +A + M+ G PD VT+ ++I+
Sbjct: 541 QHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEK 600
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIY 329
D A+K+ M+ + L+ R +
Sbjct: 601 DENDKAEKLLHEMIAKGLLHFRNFH 625
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 71/156 (45%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +I + ++ + K L M KG P+L T ++ I + + + +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G + + G +P+ + ++KG C G + + + ++ + N+ Y T+++ LC+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
G+ A + + ++ P V + +++GL K+
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKD 285
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 127/295 (43%), Gaps = 4/295 (1%)
Query: 54 LKAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+KAERD +K +F + + + F +SRL A F E LL K
Sbjct: 22 IKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKC 81
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
E + I YG+ A+ F M Y C+ + KS +L LK
Sbjct: 82 NITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALR 141
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
F + E I + S N++IKA C+ G +D A + EM G P TY TLI
Sbjct: 142 FYRYMRE-MGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXG 200
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ + L+ M K C P + T+ I L + A +L+ M GI+P+
Sbjct: 201 LCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPN 260
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
TY+ ++ G C+SG A ++ M+ RR +PN Y T++H LC+EG A
Sbjct: 261 VFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 121/249 (48%), Gaps = 9/249 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A + F +M C TV + + + L +S+DL + L E+ K I+ ++
Sbjct: 203 RLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK-GIKPNV 261
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ ++ C+ G +A ++ M P++ITY+TL+ K+ + + + +
Sbjct: 262 FTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDR 321
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY-------NLVIK 299
M +G P+ + I + + +A + M GI P+ +T+ N+V++
Sbjct: 322 MKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQ 381
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C + H + A ++Y +M R + + K + ++++Y C +GD + A + + + +P
Sbjct: 382 GLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIP 440
Query: 360 SVDTISALL 368
T +A++
Sbjct: 441 DEXTWNAVV 449
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
EK +I DIF + +A+ + A V +M++ +P +Y T+ + +N+
Sbjct: 79 EKCNITEDIFLS--ICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN-KLMGLMQRFGIEPDEVTYNL 296
++ + M G P++A+ NV I+ L + A ++ M G P TY
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGT 196
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I G CR G + AK+++ M + P Y ++IH LCQ D + A + ++ K
Sbjct: 197 LIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRR 390
P+V T S+L++G K+ +A ++ +V RR
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 134/269 (49%), Gaps = 4/269 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ AG + AMD M GC V + A + ++ L+ L E+ E+
Sbjct: 31 IITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER- 86
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ ++N+++ A C++ ++ A V+ +M + G P+V+T+ +L+ F K +
Sbjct: 87 GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA 146
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L +MV KG PN+ T++ I L ++ +A +++ M+ G+ PD TY+ +I G
Sbjct: 147 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHG 206
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++ ++ A+++ M G P+ +Y ++IH C+ G A ++ K+ P
Sbjct: 207 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR 389
V T + +++GL K + +A I+ +Q
Sbjct: 267 VVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 6/265 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + + L +++F + +LE K+ G +++G KA I+ A
Sbjct: 161 NVVTYSALIDGLCKSQKFLEAKEVLEEMKA--SGVTPDAFTYSALIHGLCKADKIEEAEQ 218
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
M GC V ++ + +S L Q L E+ K D+ ++N VI
Sbjct: 219 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM-RKQRKSPDVVTYNTVIDGL 277
Query: 197 CEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C++G + +A +++ +MQ+ G V PDV+TY+T+I+ K + L + M GC P+
Sbjct: 278 CKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 337
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T+ I L R +A L+ M+R G P+ VTY +I G C++ +D A++V
Sbjct: 338 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 397
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEG 340
M PN Y TM++ LC G
Sbjct: 398 EMRNAGCPPNLVTYNTMVNGLCVSG 422
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + K+G + A T +M V + N + L + + Q L ++ E
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+ +++ VI C+ +L +A ++ M K G PDV+TYTT+I K R E
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L M GC PN+ T+ I L R+ +A ++M M+ G P+ VTYN ++ G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 301 FCRSGHLDMAKKVYSAMLGRR--LMPNRKIYQTMIHYL 336
C SG + A+++ M R P+ Y+T+++ L
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ +I AFC+ G L +A + EM+K PDV+TY T+I K + +
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290
Query: 245 NLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M G P++ T++ I L +A KL+ M + G PD VTY +I G C+
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G L+ A+ + M PN Y T+I LC+ + A + ++ P++ T
Sbjct: 351 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 410
Query: 364 ISALLEGL 371
+ ++ GL
Sbjct: 411 YNTMVNGL 418
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I AF L++A ++ EM++ G P+++TY L+ A K + +
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G PN+ TFN + + A KL+G+M G+ P+ VTY+ +I G C+S
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
AK+V M + P+ Y +IH LC+ A M + P V
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 365 SALLEGLKKNNQPCKANTIMALV--QRRVPHF 394
S+++ K+ + +A + + QR+ P
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 267
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 2/261 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A M G + V + +A + L +S+ + L E+ + +
Sbjct: 137 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM-KASGVTP 195
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+++ +I C+ +++A ++ M G PDV+ Y+++I AF K +
Sbjct: 196 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 255
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCR 303
M + P++ T+N I L + +A ++ MQ G + PD VTY+ VI G C+
Sbjct: 256 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCK 315
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
S L A+K+ M P+ Y T+I LC+ G A + + + P+V T
Sbjct: 316 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 375
Query: 364 ISALLEGLKKNNQPCKANTIM 384
+ L+ GL K + +A +M
Sbjct: 376 YTTLISGLCKARKVDEAERVM 396
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G L A ++ EM+ G PD T+T +I+A N ++ +G + + GC PN+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMA--NAGDL-DGAMDHLRSMGCDPNV 57
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+ I ++ +A KL+ M+ G P+ VTYN+++ C+ + A+ V
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
M+ PN + +++ C+ G+ + A + + K P+V T SAL++GL K+ +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 377 PCKANTIM 384
+A ++
Sbjct: 178 FLEAKEVL 185
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 107/187 (57%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +NIVI AFC+ G+LD A ++ EM++ + PD+ITYT+LI K ++ E L+
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLF 271
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +P++ TFN I L + + A ++M M G+EP+E+TYN+V+ G+C
Sbjct: 272 LEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++++ +M+ + + P+ Y +I+ ++ + A + ++ + PS+ T
Sbjct: 332 GQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTC 391
Query: 365 SALLEGL 371
S LL GL
Sbjct: 392 SVLLRGL 398
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S + LK L + ++ + E+ K I D F+ + V+ + C M D + V+
Sbjct: 74 SFSKLLKALVHMKHYSSVVSIFREI-HKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAI 132
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKR 270
K G+ + +T+TTLI + +N+ + L+ +V + C P+ + + L K
Sbjct: 133 HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKG 192
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A L+ LM++ +PD YN+VI FC+ G LD A + + M + + P+ Y
Sbjct: 193 HTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYT 252
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
++I L + + + + + N P V T +++++GL K + A IM
Sbjct: 253 SLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMT 307
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + V+ C+ G KA+ ++ M++ KPD Y +I AF KD + L
Sbjct: 177 DEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLL 236
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL-MQRFGIEPDEVTYNLVIKGFCR 303
N M K P++ T+ I L K W+ + + L M I PD T+N VI G C+
Sbjct: 237 NEMKQKNIPPDIITYTSLIDGL-GKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK 295
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ A+++ + M+ + + PN Y ++ C G A + + K P + +
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIIS 355
Query: 364 ISALLEG 370
+AL+ G
Sbjct: 356 YTALING 362
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ DI S+ +I + E +DKA + E+ + G+KP ++T + L+ ++ R E
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G PNL T + +A ++R + + Y VI G
Sbjct: 409 IFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G LD A + + L P+ Y MI CQEG + A M + +P
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDN 528
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
T + ++ G ++++ + + + + F + + I+++
Sbjct: 529 RTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAED 576
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ + L + ++ + + + EK ++ + ++N+V+ +C G + +A +
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMTYMIEK-GVEPNEITYNVVMDGYCLRGQMGRARRIF 341
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M G++PD+I+YT LI+ + + + + L+ + G P++ T +V ++ L
Sbjct: 342 DSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEV 401
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R+ A MQ G P+ T+ ++ G+ ++G ++ A + + RR N +IY
Sbjct: 402 GRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+I+ LC+ G + A+ + P V T +A++ G
Sbjct: 462 TAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 143/278 (51%), Gaps = 10/278 (3%)
Query: 109 LPQGRRE-GFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+ QG+ E G ++ ++ G K + A++ F +M G + V + ++ + L
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
L ++ E+ I D+F+F+ +I AF + G L +A + EM K + P ++TY+
Sbjct: 307 WSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+LI+ F +R + ++ MV K CFP++ T+N I+ +R + ++ M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+ + VTYN++I+G ++G DMA++++ M+ + PN Y T++ LC+ G A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ + + P++ T + ++EG+ CKA +
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM------CKAGKV 517
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ ++ +++ +I C G A ++ +M + + PDV T++ LI AF K+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ MV + P++ T++ I R +A ++ M PD VTYN +
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
IKGFC+ ++ +V+ M R L+ N Y +I L Q GD ++A + K+ +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P++ T + LL+GL KN + KA + +QR
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I + ++++I+I FC L A V+ +M KLG +P+++T ++L++ +
Sbjct: 103 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 162
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + M G PN TFN I L ++ +A L+ M G +PD V
Sbjct: 163 HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV 222
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G D+A + + M +L P IY T+I LC+ + A + K+
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + +I + + ++ +C + +A ++ +M G +P+ +T+ TLI + N+
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV KGC P+L T+ V + L + + A L+ M++ +EP + YN +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A ++ M + + PN Y ++I LC G ++ A + D +++
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P V T SAL++ K + +A + +V+R +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ +V+ C+ G D A+ ++ +M++ ++P V+ Y T+I K +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I PD T++ +I F
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P V
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 363 TISALLEGLKK 373
T + L++G K
Sbjct: 398 TYNTLIKGFCK 408
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ +++ V EM + G+ + +TY LI ++ ++ ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +QR +EP TYN++I+G C++
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ + + + P+ Y TMI C++G A + K+ + +P+
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 575 NTLIRARLRDGDREASAELI 594
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I I +++ +I FC LD+A + M PDV+TY TLI F K R E
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G ++ M +G N T+N+ IQ L A ++ M G+ P+ +TYN ++
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L+ A V+ + ++ P Y MI +C+ G + + C S+ K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGV 532
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P V + ++ G + +A+ +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 79 NKYAFEDTVSR---LAGARRFDYIEHLLEHQKSLPQ----GRREGFIMRIMMLYGKAGMI 131
+K+ F D V+ + G ++ +E +E + + Q G + + I L+ +AG
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDC 447
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFN 190
A + F +M G + + N L L ++ L KA+ F E ++ ++ I+++N
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF--EYLQRSKMEPTIYTYN 505
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I+ C+ G ++ + + + GVKPDV+ Y T+IS F + E + L+ M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +N I+ + + +L+ M+ G D T LV G LD
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 622
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 1/289 (0%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S +A +FD + L E ++L ++ + + + A+ M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + +L++ L S+ + A + ++ + Q + +FN +I
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY-QPNTVTFNTLIHGLFLHNKA 202
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A ++ M G +PD++TY +++ K ++ L N M P + +N
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + A L M+ GI P+ VTY+ +I C G A ++ S M+ R++
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ + +I +EG A + + +K++ PS+ T S+L+ G
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ M+ F +M G + N ++ L ++ D Q E+ + +I ++N
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYN 470
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L+ + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ +N I K +A+ L M+ G P+ YN +I+ R G + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 311 KKVYSAM 317
++ M
Sbjct: 591 AELIKEM 597
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + EM K P +I ++ L+SA K N+ ++ L M G N T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++G M + G EP+ VT + ++ G+C S + A + M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
PN + T+IH L + A + + K P + T ++ GL K
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 10/346 (2%)
Query: 63 LFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM 122
+F L K R V + Y + +S + + + +LE K + G R +
Sbjct: 248 IFDLMKC----RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEI--GLRPTAVTYNT 301
Query: 123 ML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y G ++ A D M G TV + N + L + + E+ EK
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D ++NI+I +C G + KA+ + EM G++P +TYT+LI K R +
Sbjct: 362 LVP-DSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L+ +V KG FP+L FN I +A ++ M + + PDEVT+N +++G
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
CR G ++ A+++ M R + P+ Y T+I + GD A+ + + + + P+
Sbjct: 481 RCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPT 540
Query: 361 VDTISALLEGLKKNNQPCKANTIM-ALVQRRVPHFSSNQLSAFKSI 405
+ T +AL++GL KN + A ++ ++ + + + LS + I
Sbjct: 541 LLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ I+ + +FNI+I C+ G L KA + M+ LG+KP+V+TY T+I + R E
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++LM C+G P+ T+ I + + + +A+ ++ M+ G+ P VTYN +I
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C G+L+MA M+ LMP Y +IH L + + A + K+ +K V
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P T + L+ G + KA T+
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTL 388
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++++I+A CE+ D A+ M+ GV P V ++S F K NR E L+ M
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
++ TFN+ I L + + +A + +GLM+ GI+P+ VTYN +I G+C G ++
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ ++ M R + P+ Y + I +C+EG A M + + P+ T + L+
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Query: 369 EG 370
+G
Sbjct: 304 DG 305
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N ++ F + +KA+++ EM ++ +K V+T+ +I+ K+ + +
Sbjct: 156 VHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIG 215
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
LM G PN+ T+N I ++ R A + LM+ G++PD TY I G C+ G
Sbjct: 216 LMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEG 275
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A + M L P Y T+I C +G+ +A+ +++ +P+V T +
Sbjct: 276 KLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYN 335
Query: 366 ALLEGL 371
L+ L
Sbjct: 336 MLIHAL 341
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
LG+K V+ Y LI A + R + +++M KG P++ N + + R+ +
Sbjct: 116 LGIKTYVL-YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEK 174
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
A L M R I+ VT+N++I C+ G L AK+ M + PN Y T+IH
Sbjct: 175 AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTIM 384
C G A M D MK V P T + + G+ K + +A+ ++
Sbjct: 235 GYCSRGRVEGAR-MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGML 284
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E + I+ D S+N +I + + G + A+ V EM +G P ++TY LI
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLC 552
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
K+ + L M+ KG PN T+ I+ + N
Sbjct: 553 KNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGN 588
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 138/304 (45%), Gaps = 7/304 (2%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYG 145
+ +L A F + LL K RE + IM YG+AG+ A DM +Y
Sbjct: 136 IDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYS 195
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C+ T +S N L VL K + E+ K I +++F +V+KA C + +D A
Sbjct: 196 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK-GISPTVYTFGVVMKALCLVNEVDSA 254
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
++ +M + G P+ I Y TLI A K R L M+ GC P++ TFN I
Sbjct: 255 CALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHG 314
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L R +A KL+ M G P+ TY +++ G CR G +D A+ +L + PN
Sbjct: 315 LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR----MLLNKVPNPN 370
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
++ T+I+ G + A + +SM P + T + L+ GL K A +M
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430
Query: 385 ALVQ 388
+Q
Sbjct: 431 NEMQ 434
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 4/310 (1%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
N++ N F ++ R D + ++ H+ L G ++ G K G
Sbjct: 364 NKVPNPNVVLFNTLINGYVSRGRLDEAKAVM-HESMLSVGCGPDIFTYNTLILGLCKKGY 422
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + +M + GC+ V + + + L+ + L E+ K + + +N
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNAVGYN 481
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A C+ + A + +M G KPD+ T+ +LI K N+ E GL+ M+ +
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N T+N I + + +A KL+ M G D++TYN +IK CR+G+++
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M+ + L PN +I+ LC+ G+ A +D + + P + T ++L+ G
Sbjct: 602 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 661
Query: 371 LKKNNQPCKA 380
L K + +A
Sbjct: 662 LCKTGRAQEA 671
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAAL----KVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++ A++ F DM GCK + + N+ + KV L Q L+E + +
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-----GVIANT 547
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I AF G + +A ++ +M G D ITY LI A + E G L+
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG PN + N+ I L A + + M G+ PD VTYN +I G C++G
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A ++ + + P+ Y T+I + C+EG F+ A+++ + ++P+
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 721
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++N +IKA C G ++K + +M G+ P+ I+ LI+ + +
Sbjct: 580 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 639
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P++ T+N I L R+ +A L +Q GI PD +TYN +I C+
Sbjct: 640 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 699
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G D A + S + +PN + ++ +EGD
Sbjct: 700 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G I+ A++ F + + + L+ L + + K + F E+ E
Sbjct: 72 LITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECG 131
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V+++ TL++ + K + G
Sbjct: 132 YPA-SLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L N M G P++ T++V I L + R +AN L G M G+ P+ VT+ +I G
Sbjct: 191 FRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDG 250
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G LD+A +Y ML + P+ Y T+I+ LC++GD A + + +K P
Sbjct: 251 HCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPD 310
Query: 361 VDTISALLEG 370
T + L++G
Sbjct: 311 KITYTTLIDG 320
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 139/279 (49%), Gaps = 5/279 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G ++ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D+A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ +G P++ T+N I L K QA L+ M R G++PD++TY
Sbjct: 256 RLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A ++ M+ + + +Y +I LCQEG A M ++ ++
Sbjct: 316 TLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR--RVP 392
P +T + ++ K KA+ ++ +QR RVP
Sbjct: 376 GLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F NIV+K C G + +A ++ EM + V PD+++Y TLI+ K + + GL
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GCFPN T + L R +A +L+ M++ G + D V Y +I GFC +
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+LD K+++ MLG+ + N Y ++H LC+ G + A + + P V T
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++GL K+ + A ++ L+ +
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEK 348
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I ++ +++ ++ C +G +A V+ M + G+ PDV+TYT LI KD R
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L NLMV KG P+ T+NV + L + A K++ +M G + D VTYN ++KG
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Query: 302 CRSGHLDMAKKVYSAMLGRR--LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C G +D A K++++M L PN + +I LC+EG A + + +KK
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459
Query: 360 SVDTISALLEGLKK 373
++ T + LL G K
Sbjct: 460 NLVTYNMLLGGCLK 473
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 117 FIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
FIM I+ L G + G + AM +M + S N + L +++ LK L+
Sbjct: 145 FIMNIV-LKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLL 203
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ E + + ++ C+ G +D+A ++ M+K G DV+ Y TLIS F +
Sbjct: 204 EM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ G L++ M+ KG N+ T++ + L + +AN ++ M GI PD VTY
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+I G C+ G A + + M+ + P+ Y ++ LC+EG A+ + + ++
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382
Query: 355 KNWVPSVDTISALLEGL 371
K V T + L++GL
Sbjct: 383 KGKKADVVTYNTLMKGL 399
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 7/261 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGC-KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KA +K A+ +M GC +V + + R +A++ L+E +K D
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME--LLEAMKKKGFDAD 248
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + +I FC G LD+ + EM G+ +V+TY+ L+ + + + N + N
Sbjct: 249 VVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN 308
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T+ I L R+ A L+ LM G EP VTYN+++ G C+ G
Sbjct: 309 AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEG 368
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN---WVPSVD 362
+ A K+ M+ + + Y T++ LC +G + A + +SM N P+V
Sbjct: 369 LVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL-FNSMFDNENCLEPNVF 427
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L+ GL K + KA I
Sbjct: 428 TFNMLIGGLCKEGRLTKAVKI 448
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
+N LK L + + + E+ K + DI S+N +I C+ L +A +++EM
Sbjct: 147 MNIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 205
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ G P+ +T TTL+ KD R + L M KG ++ + I N
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 265
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ +L M GI + VTY+ ++ G CR G A V +AM + P+ Y +
Sbjct: 266 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 325
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
I LC++G A + ++K PS T + LL GL K
Sbjct: 326 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
Y+M L GC + K + A+++ + DL VP F +++I+I FC+
Sbjct: 464 YNMLLGGCLKAGK-IKEAMELWKQVLDLGF-------VPNSF-------TYSILIDGFCK 508
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
M +L+ A + EM+ G+ P + Y TL+++ K+ E L+ M C P++ +
Sbjct: 509 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 568
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN I + +L M G+ PD +T++ +I + G LD AK M+
Sbjct: 569 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628
Query: 319 GRRLMPNRKIYQTMIHYLCQEGD 341
P+ +Y +++ L +GD
Sbjct: 629 ASGFTPDALVYDSLLKGLSSKGD 651
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 1/248 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G++ A M G K V + N +K L + + +A++ F + ++ +
Sbjct: 366 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+FN++I C+ G L KA + +M K G +++TY L+ K + + LW
Sbjct: 426 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 485
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ G PN T+++ I R A L M+ G+ P YN ++ C+ G
Sbjct: 486 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ AK ++ M P+ + TMI + GDF + ++ P T S
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605
Query: 366 ALLEGLKK 373
L+ L K
Sbjct: 606 TLINRLSK 613
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 6/281 (2%)
Query: 61 EKLFQLFKANAHNRIVIE-NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM 119
++ +LF + N +E N + F + L R + H+K + +G +
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI--HRKMVKKGSCGNLVT 463
Query: 120 RIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
M+L G KAG IK AM+ + + G + + + + R L + E+
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM- 522
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ +F +N ++ + C+ G L++A + EM +PD+I++ T+I K
Sbjct: 523 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 582
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ L MV G P+ TF+ I L +A + M G PD + Y+ +
Sbjct: 583 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 642
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+KG G + M + + +RKI T++ LC
Sbjct: 643 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 683
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ V M + V P + + LI F +P++G G+ L++ +G N+ N+ ++
Sbjct: 93 AFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLK 152
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L ++A L+ M R + PD V+YN +I G C++ L A + M P
Sbjct: 153 GLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFP 212
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
N T++ LC++G + A + + KK + V L+ G N
Sbjct: 213 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 263
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K M+ A F +M +G + N + L + L+ ++ E+ + +
Sbjct: 506 FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA-NCEP 564
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI SFN +I + G + ++M ++G++PD +T++TLI+ K +
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P+ ++ ++ L +K + + L+ M G D + ++ C S
Sbjct: 625 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 76/172 (44%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P T L+ A + + ++ M P+ + + I+ + ++ +
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+GL+ + G + N+V+KG CR+G + A + M + + P+ Y T+I+ LC+
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
A + + P+ T + L++GL K+ + +A ++ ++++
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK 243
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 14/306 (4%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
+ P + +K RDP + LF R + ++ + +LA + F +E +L +
Sbjct: 31 DAPFVNHVKEARDPVEALTLFHEYLQ-RGFKPDYPSYAALLYKLARCQDFGAVEEVLRYV 89
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
+ +E + + YGKA ++ A++ F M + C RT +SLN+ L VL ++
Sbjct: 90 EDKNVHCQETIFIALFQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDN--- 146
Query: 167 KAIQAFLMEVPEKFHIQFDI------FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ +E E F +++ +FN++IK + E G ++A V EM + V+P
Sbjct: 147 ----GWFLEANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPS 202
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V+TY +LI ++ + GL M+ KG PN TF + ++ +A K+M
Sbjct: 203 VVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMF 262
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M+ G +P V + +++ + G +D AK V M R + P+ Y +I+YLC+EG
Sbjct: 263 DMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEG 322
Query: 341 DFNLAY 346
AY
Sbjct: 323 RAADAY 328
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 133/273 (48%), Gaps = 7/273 (2%)
Query: 102 LLEHQKSLPQGRREGFIMRIM----MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
LE + +G GF + + M+ G + G + A F +M + +V + N+
Sbjct: 149 FLEANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNS 208
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L + +L + L ++ +K + + +F ++++ C +G ++A +M +M+
Sbjct: 209 LIGYLCRNGELDKAKGLLEDMIKKGK-RPNAITFALLMEGSCLIGEHNEAKKMMFDMEYR 267
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G KP V+ + L+S K + + + + M + P++ T+N+ I +L + R+ A
Sbjct: 268 GCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADA 327
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+++ MQ G E + TY +++ GFCR G + KV +AML P + +++++
Sbjct: 328 YEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVG 387
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
L + G+ + A + ++ K+ + D AL+
Sbjct: 388 LVKSGNLDGACFVLEEMEKRQMMFCADDWEALV 420
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+N M C + N + LV+ +AN+L G + V +N++IKG+
Sbjct: 120 LFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKGWL 179
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G + A KV+ ML R++ P+ Y ++I YLC+ G+ + A + +D +KK P+
Sbjct: 180 EKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAI 239
Query: 363 TISALLEG 370
T + L+EG
Sbjct: 240 TFALLMEG 247
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 3/259 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQFDIFSFNI 191
A+ F++ G K S A L L +D A++ L V +K H Q IF
Sbjct: 46 EALTLFHEYLQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFI--A 103
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+ + + + ++ KA + M + + +L++ + N L++ G
Sbjct: 104 LFQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMG 163
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
N FNV I+ + K QA+K+ M +EP VTYN +I CR+G LD AK
Sbjct: 164 FRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAK 223
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M+ + PN + ++ C G+ N A M D + P+V L+ L
Sbjct: 224 GLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDL 283
Query: 372 KKNNQPCKANTIMALVQRR 390
K + +A +++ +++R
Sbjct: 284 GKRGKIDEAKSVLHEMKKR 302
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 144/311 (46%), Gaps = 16/311 (5%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
+ RLAGA+ D + +L +G R + ++ +G + A++ F M +
Sbjct: 189 IKRLAGAQETDAVVQILTAM--WKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSF 246
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + N L++L + + ++ + F IQ D +F I + +F G LD
Sbjct: 247 GCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ-FRIQPDAQTFRIFVHSFNRSGRLDP 305
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYK----DNRPEIGNGLWNLMVCKGCFPNLATFN 260
A + EM K G+ P V T+T LI A K D + NG+ NL C PN+ T+
Sbjct: 306 AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR----CSPNVVTYT 361
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L R +A ++ M+ PD + YN +I G ++G DMA ++ M R
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
L+PN + Y MI L + G A+ + D ++ VP V T + L++ L K Q
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ---M 478
Query: 381 NTIMALVQRRV 391
+ ++A+++ V
Sbjct: 479 DKVLAIIKEMV 489
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 140/273 (51%), Gaps = 17/273 (6%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF----- 172
I++ M+ G +I + ++ + G RTV+ + K L E + AF
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543
Query: 173 ------LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
L+EV +K + ++ ++ + G LD+A ++ EM+K G +P V+TY++
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L+++FYK ++ E L++ MV KGC +++T+++ I L QA + G M+ G
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+EP Y ++ + +D A ++++ + L+P+ +Y M++ L + + A
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA- 722
Query: 347 IMCK--DSMK-KNWVPSVDTISALLEGLKKNNQ 376
CK DSMK +N +P + T ++LL+GL K+ +
Sbjct: 723 --CKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GKAG + A+ +M GC+ +V + ++ + + + + E+ K + D
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA-D 632
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++++VI C+ +D+A V M++ G++P + Y TL+S+ KD + + ++N
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ P+ +N+ + LV R +A KL+ M+ I PD TY ++ G +SG
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A +++ M P+ Y +++ L + G + A I+ + KK VP V T S
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYS 812
Query: 366 ALLEGLKKNNQ 376
+L++ L K +
Sbjct: 813 SLIDSLGKEGR 823
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ ++ + G L A ++ M K PDV+TY++LI + K+ R E +
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KGC PN+ ++ I K +A +L MQR P+ VTYN ++ G ++
Sbjct: 832 ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L++A+K+ M +P+ Y +I + + G + A K +K VP V T
Sbjct: 892 GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951
Query: 365 SALLEGLKKNNQPCKA 380
++L+E L K ++ +A
Sbjct: 952 TSLIESLGKVDKLLEA 967
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 3/248 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEK 179
+M + GK G + HA+ F M C V + ++ + L E R +A F + +
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++S +I +F + G++D+A + EMQ+ P+++TY L+S K R +
Sbjct: 839 CTPNVGVYSS--LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV 896
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M GC P+L T+N+ I + +A M+ GI PD +T+ +I+
Sbjct: 897 AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE 956
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ L A +++ +M P+ Y +I L + G + A ++ + K +P
Sbjct: 957 SLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Query: 360 SVDTISAL 367
TI +
Sbjct: 1017 DGITIGIM 1024
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ ++G + A + +M G V + + L +S ++ F + +
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGM-KNLRCSP 355
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ ++ + G L++A V VEM++ PD I Y TLI K ++ GL+
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G PNL T+N+ I L R +A +L ++ G PD TYN +I +
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475
Query: 305 GHLDMAKKVYSAML--GRRLMPNRK-----------------------------IYQTMI 333
G +D + M+ G + +R Y T++
Sbjct: 476 GQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLM 535
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G + A + + K +P+V T + L++GL K + +A +++ ++++
Sbjct: 536 SAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 153 LNAAL--KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
LN L V+ +DL + F ++ + ++ ++IK D ++
Sbjct: 147 LNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILT 206
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
M K G + + T+L+ F N ++N M GC P+ +N ++ LV
Sbjct: 207 AMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGG 266
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
A + G + +F I+PD T+ + + F RSG LD A + M+ + P +
Sbjct: 267 FYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFT 326
Query: 331 TMIHYLCQEGDFNLAYIMCK--DSMKK-NWVPSVDTISALLEGLKK 373
+I L + G+ + A CK + MK P+V T + L+ GL K
Sbjct: 327 VLIDALVKSGNIDEA---CKFFNGMKNLRCSPNVVTYTTLVNGLAK 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 37/245 (15%)
Query: 66 LFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY 125
+F+A A R V + + + L R + + E+ S G ++ +
Sbjct: 795 IFRAMAKKRCV-PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GK GM+ A++ F +M C + + N L L ++ L + L E+ EK D
Sbjct: 854 GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM-EKVGCVPD 912
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT---------------------- 223
+ ++NI+I +MG++D+A M++ G+ PDVIT
Sbjct: 913 LVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFD 972
Query: 224 -------------YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
Y LI + + +++ M KGC P+ T + + L +
Sbjct: 973 SMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVRE 1032
Query: 271 RSWQA 275
+ + A
Sbjct: 1033 QQFHA 1037
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A M GC V + + L + DL + L E+ K +Q
Sbjct: 874 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQP 932
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF++N ++ C+ G +++A ++ E + G+ D +TYTTL+ A+ K + +
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P + TFNV + KL+ M GI P+ T+N ++K +C
Sbjct: 993 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+L A +Y M R + P+ K Y+ ++ C+ + A+ + ++ K + SV T
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
S L++G K + +A + ++R
Sbjct: 1113 SVLIKGFLKRKKFLEAREVFDQMRRE 1138
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++A F E+ + I D+ ++ +I FC++G + +A + EM G++PD +T+
Sbjct: 809 DIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T LI+ + K + + N M+ GC PN+ T+ I L + AN+L+ M +
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G++P+ TYN ++ G C+SG+++ A K+ L + Y T++ C+ G+ +
Sbjct: 928 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGL 371
A + K+ + K P++ T + L+ G
Sbjct: 988 AQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 25/296 (8%)
Query: 102 LLEHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
L E +++ + R+G + ++ + K G I+ A FY+MH V + A
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVM 209
+ + D+ +E + FH F D +F +I +C+ G + A+ V
Sbjct: 835 IISGFCQIGDM-------VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M + G P+V+TYTTLI K+ + N L + M G PN+ T+N + L
Sbjct: 888 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A KL+G + G+ D VTY ++ +C+SG +D A+++ MLG+ L P +
Sbjct: 948 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+++ C G + + K P+ T ++L++ Q C N + A
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK------QYCIRNNLKA 1057
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G IK A M L G V S + + +L + L+EV ++ ++ + +
Sbjct: 703 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK-LIEVMKRKGLKPNSYI 761
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C + L +A EM + G+ PD + YTTLI F K + + M
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ P++ T+ I +A KL M G+EPD VT+ +I G+C++GH+
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V++ M+ PN Y T+I LC+EGD + A + + K P++ T ++++
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
GL CK+ I V + V F + L+A
Sbjct: 942 NGL------CKSGNIEEAV-KLVGEFEAAGLNA 967
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--------MEVPEKFHIQFDIFS- 188
F+D ++SL + + S+DLK Q+ + + V + F FD+
Sbjct: 550 FFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVY 609
Query: 189 -----------FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD--- 234
F++ + + G+L +A V +M G+ V + ++ KD
Sbjct: 610 TYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK 669
Query: 235 ---------NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
PE+G VC N+A++N+ I + R +A+ L+ LM+
Sbjct: 670 TATAIIVFREFPEVG-------VCW----NVASYNIVIHFVCQLGRIKEAHHLLLLMELK 718
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G PD ++Y+ V+ G+CR G LD K+ M + L PN IY ++I LC+ A
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+ +++ +P + L++G CK I A
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGF------CKRGDIRA 812
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + ++M G + + + N+ + L +S +++ + E E + D
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADT 969
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ A+C+ G +DKA ++ EM G++P ++T+ L++ F E G L N
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE--------------- 291
M+ KG PN TFN ++ + A + M G+ PD
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 1089
Query: 292 --------------------VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
TY+++IKGF + A++V+ M L +++I+
Sbjct: 1090 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y K+G + A + +M G + T+ + N + L+ + L + K
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK- 1033
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I + +FN ++K +C L A + +M GV PD TY L+ K +
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
L+ M KG +++T++V I+ + +++ +A ++ M+R G+ D+ ++
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 1149
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 140/316 (44%), Gaps = 3/316 (0%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
++ + LFK N + + + ++ AR F LL+ +
Sbjct: 149 QEAYDLFK-NHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT 207
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ G + A+ + DM C +V + + L +S + L ++ E
Sbjct: 208 IIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEA- 265
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ ++N +I FC++G +D+A ++ +M + PDV TY LI + K RP+ G
Sbjct: 266 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 325
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L MV GC PN T+N + LV + A L +M R +P T+NL+I
Sbjct: 326 AKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 385
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC+ G LD+A +++ M R +P+ Y MI C+ + A + + + P
Sbjct: 386 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 445
Query: 361 VDTISALLEGLKKNNQ 376
V T ++++ GL K +Q
Sbjct: 446 VVTYNSIVSGLCKASQ 461
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI+++NI+I C +D A ++ M + G PDV+TY +++S K ++ + ++
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ G F ++ T + I L RR A KL+ M+R G PD V Y ++I GFC++
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD + +S ML + +P Y +I LC+ ++ K +++ P
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589
Query: 365 SALLEGLKKNNQ 376
+++++GL K++
Sbjct: 590 TSVIDGLCKSDS 601
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPE 178
+M+ G +A I A M GC V + N+ + L ++ + +A+ + EV
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD--EAYEVYEVLR 473
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
D+ + + +I C+ LD A ++ EM++ G PDV+ YT LI F K ++ +
Sbjct: 474 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLD 533
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++ M+ KGC P + T+++ I L R L+ M G+ PD + Y VI
Sbjct: 534 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVI 593
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+S D A ++Y M P Y ++ LC+ + A + + +
Sbjct: 594 DGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCL 653
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P T +++ +G K+ + KA + ++ R
Sbjct: 654 PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 130/315 (41%), Gaps = 44/315 (13%)
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+LFQL +R + + Y + +S A R D LLE G +
Sbjct: 397 ELFQLMT----DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE--AGCPPDVVTYN 450
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
++ G KA + A + + + G V + + + L +SR L + L E+ E+
Sbjct: 451 SIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM-ER 509
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKA------------------YLVMVE---------- 211
D+ ++ I+I FC+ LDK+ Y ++++
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 569
Query: 212 -------MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
M + GV PD I YT++I K + + L+ LM GC P + T+NV +
Sbjct: 570 GCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD 629
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L R +A L+ +M+ G PD VTYN V GF +S D A +++ AM R P
Sbjct: 630 KLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689
Query: 325 NRKIYQTMIHYLCQE 339
+Y ++ L E
Sbjct: 690 TPFMYSLLLTKLVAE 704
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G K T L+SAF + + + L+ C C P+ T++ I R QA
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M++ GI P YN +IKG C +G +D A Y M R P+ Y ++
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDA 245
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
LC+ + A ++ +D ++ P+V T + L+ G K
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 32/361 (8%)
Query: 45 PLEPPALVK-LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL 103
P+ +VK L+ E D + FK+ +++ +E + +L D + +LL
Sbjct: 38 PVSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLL 97
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+ K + ++ Y ++ + + + FY + +GC+ +VK N L L
Sbjct: 98 QQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQ 157
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
K I A + + ++ ++F++N+++KA C+ G +D A ++VEM G PD ++
Sbjct: 158 NLFKMINALYNNMKSE-GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVS 216
Query: 224 YTTLISAFYK----DNRPEIGN--------------------------GLWNLMVCKGCF 253
YTT+IS+ K D E+ L N MV +G
Sbjct: 217 YTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ +++ I L + + + G M G P+ T+ +IKGF G + A +
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ M+ + PN Y T+IH LC +G+ + A + K + P+V T S ++ G K
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396
Query: 374 N 374
+
Sbjct: 397 S 397
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S++ VI +MG ++ + V M G +P+V T+T+LI F+ R GLW
Sbjct: 278 NVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLW 337
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
NLM+ +G PN+ +N I L + +A + M++ I P+ TY+ +I GF +S
Sbjct: 338 NLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKS 397
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + ++ M+ PN +Y M+ LCQ F+ A+ + + + P+V T
Sbjct: 398 GDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITF 457
Query: 365 SALLEGL 371
+ ++GL
Sbjct: 458 NNFIKGL 464
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 5/265 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--HIQFDIFSF 189
K A D +M G V S + + L+ D+ ++ L F + ++ +F
Sbjct: 261 KEAFDLMNEMVDRGVDPNVISYSTVISCLS---DMGNVELSLAVFGRMFVRGCRPNVQTF 317
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+IK F G + A + M + GV P+V+ Y TLI D + +WN M
Sbjct: 318 TSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK 377
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
PN+ T++ I A + M G P+ V Y ++ C+ D
Sbjct: 378 DSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQ 437
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M+ P + I LC+ G A + K +P++ T + LL+
Sbjct: 438 AFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLD 497
Query: 370 GLKKNNQPCKANTIMALVQRRVPHF 394
GL + N +A ++ ++ R F
Sbjct: 498 GLFRANAFREACGLIRELEERKVEF 522
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 38/242 (15%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ ++ F M + GC+ V++ + +K R A+ + + + E + ++
Sbjct: 293 GNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG--VSPNVV 350
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C G +D+A V +M+K ++P+V TY+T+I F K WN M
Sbjct: 351 AYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410
Query: 248 VCKGCFPN-----------------------------------LATFNVRIQHLVNKRRS 272
+ GC PN + TFN I+ L R
Sbjct: 411 INCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRV 470
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A ++ M+++ P+ TYN ++ G R+ A + + R++ + Y T+
Sbjct: 471 EWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI 530
Query: 333 IH 334
++
Sbjct: 531 MY 532
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + ++ C+M + D+A+ ++ M G P VIT+ I + R E +
Sbjct: 418 NVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVL 477
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M C PN+ T+N + L +A L+ ++ +E D VTYN ++ GF +
Sbjct: 478 DQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFN 537
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDT 363
G ++ ML + + T ++ C+ G A ++ S +K + + T
Sbjct: 538 GMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIIT 597
Query: 364 ISALLEGL 371
+ +L G+
Sbjct: 598 HTIILWGI 605
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG ++ AM+ M Y C +++ N L L + + + E+ E+ ++FD
Sbjct: 466 RAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEER-KVEFDC 524
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-NGLWN 245
++N ++ F G+ + ++ +M G+K D IT T ++A+ K + + L N
Sbjct: 525 VTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDN 584
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG-FCRS 304
+ K ++ T + + + N + +A + M + GI P+ T+N++++G F +
Sbjct: 585 ISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKL 644
Query: 305 GHL 307
GH+
Sbjct: 645 GHM 647
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 68/175 (38%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY T+I ++N + + L M + + F I+ Q K+
Sbjct: 75 LTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYR 134
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
++ FG EP YNLV+ M +Y+ M L PN Y ++ LCQ G
Sbjct: 135 IREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGK 194
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
+ A + + K P + + ++ + K KA + + VP +++
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNA 249
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A TF M K + NA + L ++ + Q LME+ + +
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN-GVNP 306
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +I A+ G L+K ++V+ EMQ+ G+KP+V++Y ++++AF K+ + +
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M K PN +N I V + QA L+ M+ GI P VTYNL+IKG C
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 426
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+++ +++ RL+P+ Y T+I C G+ + A + + K +V T
Sbjct: 427 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486
Query: 365 SALLEGL 371
L+ GL
Sbjct: 487 HQLISGL 493
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + N A++ + DL L + + FS+N+VI G
Sbjct: 22 GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 81
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V EM + V P+ ITY T+I K E G L + MVC G PN T+NV +
Sbjct: 82 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 141
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTY------------------------------ 294
L R + + L+ M + PD TY
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201
Query: 295 -----NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
++++ G C+ G + +A++V +++ L+P R IY T+I+ CQ G+ A+
Sbjct: 202 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 261
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
++ P T +AL+ GL K + A ++ +Q
Sbjct: 262 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I++ C+ G + A V+ + G+ P + Y TLI+ + + E +
Sbjct: 204 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + P+ T+N I L R A L+ MQ G+ P T+N +I + R+G
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ V S M L PN Y ++++ C+ G A + D K+ +P+ +A
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383
Query: 367 LLE 369
+++
Sbjct: 384 IID 386
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ C G + + ++ EM + PD TY+ L ++ + L+
Sbjct: 134 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 193
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G T ++ + L + A +++ + G+ P V YN +I G+C++G
Sbjct: 194 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 253
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A + M R + P+ Y +I+ LC+ A + + P+V+T +
Sbjct: 254 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 313
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L++ + Q K +++ +Q
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQE 336
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 1/244 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M +G K + N L L + + A L E+ + + D F+++I+ G
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP-DGFTYSILFDGLSRNG 182
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ + K GV T + L++ KD + I + +V G P +N
Sbjct: 183 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 242
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I A G M+ I+PD +TYN +I G C++ + A+ + M
Sbjct: 243 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 302
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ P + + T+I + G +I+ + + P+V + +++ KN + +A
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362
Query: 381 NTIM 384
I+
Sbjct: 363 VAIL 366
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 8/292 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
A E TV RLA A D +++ L+ + EG ++ + + +AG A+ TFY
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116
Query: 142 -HLYGCKR-TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
H GC TV+ N L L +L A + + K ++ +++++N++IKA C+
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRE-NLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQN 175
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+ A ++ EM + G +PD +++TT+ISA K +R + G+ M P A++
Sbjct: 176 DRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASY 230
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N + L + R + ++ M G+ PD V Y ++ FC++ L MA + + M+
Sbjct: 231 NAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVT 290
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+PN + + ++ +G + A M + + W PS + + L+ GL
Sbjct: 291 EGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGL 342
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIKAFCEMGILDKAYLVM 209
S NA + L ++ + FL+ V E H ++ D ++ ++ AFC+ L A ++
Sbjct: 229 SYNAVVHALCGQFRMR--EVFLV-VDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAIL 285
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M G P+V T+T L+ F+ D + G+WN MV +G P+ ++NV I+ L +
Sbjct: 286 ARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHI 345
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A + M + PD TY+ +I GF ++G LD+A +++ M PN +Y
Sbjct: 346 GDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVY 405
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
M+ LC++ F+ A + +N P+ T + L+ L
Sbjct: 406 TNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSL 447
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+N++I+ C +G L +A V M K PDV TY+TLI F K ++ +WN
Sbjct: 333 ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWND 392
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN+ + + L K QA L+ M P+ +T+N +I+ C G
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A V+ M PN + Y ++H L +EG+ A M + + + S+ + +
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512
Query: 367 LLEGL 371
+ GL
Sbjct: 513 TISGL 517
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ + M G + S N ++ L DLK F+ K D+ +
Sbjct: 311 GKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKR-ALFVFSCMGKSDCLPDVRT 369
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I F + G LD A + +M G KP+V+ YT ++ K + L + M
Sbjct: 370 YSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMS 429
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ C PN TFN I+ L + R+ +A + M+R+G P++ TYN ++ G R G+ +
Sbjct: 430 LENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCE 489
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ + ML + Y T I LCQ A I+ + + P T +A++
Sbjct: 490 DALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAII 549
Query: 369 EGLKKNNQ 376
K
Sbjct: 550 HAYCKEGN 557
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG + AM + DM GCK V + VL + + + ++ + +
Sbjct: 377 FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLE-NCPP 435
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +I++ C++G +A V M++ G P+ TY L+ +++ E +
Sbjct: 436 NTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRML 495
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G +L ++N I L R +A L+G M GI+PD T+N +I +C+
Sbjct: 496 TEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKE 555
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A + M N Y +++ LC + + A + + + P+ T
Sbjct: 556 GNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATW 615
Query: 365 SALLEGL 371
+ L+ G+
Sbjct: 616 NVLVRGI 622
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T + N + L ++A + + E+ EK I D ++NIVI +C+ G KA+ +
Sbjct: 362 TFYTYNTLIHGLFMENKIEAAEILIREIREK-GIVLDSVTYNIVINGYCQHGDAKKAFAL 420
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM G+KP TYT+LI + N+ + L+ +V KG P+L N +
Sbjct: 421 HDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 480
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+A L+ M R I+PD+VTYN +++G C G + A+++ M R + P+
Sbjct: 481 TGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 540
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
Y T+I ++GD A+I+ + + + P++ T +ALL+GL KN
Sbjct: 541 YNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKN 586
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 4/257 (1%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
Y + M+ A++ FY M G ++ N L +L+ ++ F ++ + I+
Sbjct: 165 FYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADM-YRMEIK 223
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++++FNI+I C+ G L KA + M+ G+KP ++TY TL+ + R E +
Sbjct: 224 SNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMI 283
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG P+L T+N + + N+ R A++++ M+ G+ PD V+YN++I+G
Sbjct: 284 ISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSN 340
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G L+ A M+ + ++P Y T+IH L E A I+ ++ +K V T
Sbjct: 341 NGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 400
Query: 364 ISALLEGLKKNNQPCKA 380
+ ++ G ++ KA
Sbjct: 401 YNIVINGYCQHGDAKKA 417
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 33/282 (11%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ L + I++A + DM+ K V + N + VL + LK + FL + E F
Sbjct: 197 ILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL-GIMESF 255
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEI 239
I+ I ++N +++ + G ++ A +++ EM+ G +PD+ TY ++S + R E+
Sbjct: 256 GIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEV 315
Query: 240 -----GNGL------WNL--------------------MVCKGCFPNLATFNVRIQHLVN 268
G GL +N+ MV +G P T+N I L
Sbjct: 316 LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + A L+ ++ GI D VTYN+VI G+C+ G A ++ M+ + P +
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT 435
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y ++I+ LC+ A + + + K P + ++ L++G
Sbjct: 436 YTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDG 477
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+NI+I+ G L+ A+ EM K G+ P TY TLI + +N+ E L
Sbjct: 327 DSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 386
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG + T+N+ I + +A L M GI+P + TY +I CR
Sbjct: 387 REIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRR 446
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
A +++ ++G+ + P+ + T++ C G+ + A+ + K+ + N P T
Sbjct: 447 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTY 506
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRV---PHFSSNQL 399
+ L+ GL + +A +M ++RR H S N L
Sbjct: 507 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 544
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+ +++ +C++ ++D+A M++ G P T ++S + NR E + M
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
N+ TFN+ I L + + +A +G+M+ FGI+P VTYN +++G+ G ++
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A+ + S M + P+ + Y ++ ++C EG
Sbjct: 279 GARMIISEMKSKGFQPDLQTYNPILSWMCNEG 310
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 143/278 (51%), Gaps = 10/278 (3%)
Query: 109 LPQGRRE-GFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+ QG+ E G ++ ++ G K + A++ F +M G + V + ++ + L
Sbjct: 861 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
L ++ E+ I D+F+F+ +I AF + G L +A + EM K + P ++TY+
Sbjct: 921 WSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 979
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+LI+ F +R + ++ MV K CFP++ T+N I+ +R + ++ M +
Sbjct: 980 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+ + VTYN++I+G ++G DMA++++ M+ + PN Y T++ LC+ G A
Sbjct: 1040 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 1099
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ + + P++ T + ++EG+ CKA +
Sbjct: 1100 MVVFEYLQRSKMEPTIYTYNIMIEGM------CKAGKV 1131
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + A D F ++ G + V + A + L S L ++ +K I ++
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNV 363
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ AF + G + +A + EM ++ + PD++TY++LI+ +R + N +++L
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC ++ ++N I +R KL M + G+ + VTYN +I+GF ++G
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A++ +S M + P+ Y ++ LC G+ A ++ +D K+ + T +
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 367 LLEGLKKNNQ 376
++ G+ K +
Sbjct: 544 VIRGMCKTGK 553
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ ++ +++ +I C G A ++ +M + + PDV T++ LI AF K+ +
Sbjct: 897 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 956
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ MV + P++ T++ I R +A ++ M PD VTYN +
Sbjct: 957 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 1016
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
IKGFC+ ++ +V+ M R L+ N Y +I L Q GD ++A + K+ +
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P++ T + LL+GL KN + KA + +QR
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + +I + + ++ +C + +A ++ +M G +P+ +T+ TLI + N+
Sbjct: 758 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV KGC P+L T+ V + L + + A L+ M++ +EP + YN +I
Sbjct: 818 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A ++ M + + PN Y ++I LC G ++ A + D +++
Sbjct: 878 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P V T SAL++ K + +A + +V+R +
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I + ++++I+I FC L A V+ +M KLG +P+++T ++L++ +
Sbjct: 717 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 776
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + M G PN TFN I L ++ +A L+ M G +PD V
Sbjct: 777 HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV 836
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G D+A + + M +L P IY T+I LC+ + A + K+
Sbjct: 837 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 896
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 897 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D+++FNIVI FC + A ++ +M KLG +PD +T +L++ F + NR
Sbjct: 215 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 274
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L + MV G P++ +N I L +R A ++R GI P+ VTY +
Sbjct: 275 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 334
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C S A ++ S M+ +++ PN Y ++ + G A + ++ ++ +
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 394
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALV 387
P + T S+L+ GL +++ +AN + L+
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLM 424
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I DI +++ +I C +D+A + M G DV++Y TLI+ F
Sbjct: 385 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 444
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K R E G L+ M +G N T+N IQ +A + M FGI PD
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 504
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKD 351
TYN+++ G C +G L+ A ++ M R + + Y T+I +C+ G A+ + C
Sbjct: 505 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564
Query: 352 SMKKNWVPSVDTISALLEGL 371
S+ K P + T + ++ GL
Sbjct: 565 SL-KGLKPDIVTYTTMMSGL 583
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ +V+ C+ G D A+ ++ +M++ ++P V+ Y T+I K +
Sbjct: 832 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 891
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I PD T++ +I F
Sbjct: 892 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 951
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P V
Sbjct: 952 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 1011
Query: 363 TISALLEGLKK 373
T + L++G K
Sbjct: 1012 TYNTLIKGFCK 1022
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 96/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I + C+ ++ A+ E+++ G++P+V+TYT L++ +R L
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ K PN+ T++ + V + +A +L M R I+PD VTY+ +I G C
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A +++ M+ + + + Y T+I+ C+ + ++ ++ V + T
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 471
Query: 365 SALLEGL 371
+ L++G
Sbjct: 472 NTLIQGF 478
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ +++ V EM + G+ + +TY LI ++ ++ ++
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 1068
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +QR +EP TYN++I+G C++
Sbjct: 1069 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 1128
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ + + + P+ Y TMI C++G A + K+ + +P+
Sbjct: 1129 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 1188
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 1189 NTLIRARLRDGDREASAELI 1208
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I I +++ +I FC LD+A + M PDV+TY TLI F K R E
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G ++ M +G N T+N+ IQ L A ++ M G+ P+ +TYN ++
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L+ A V+ + ++ P Y MI +C+ G + + C S+ K
Sbjct: 1088 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGV 1146
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P V + ++ G + +A+ +
Sbjct: 1147 KPDVVAYNTMISGFCRKGSKEEADAL 1172
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+N +I FC+ ++ + EM + G+ + +TY TLI F++ + +
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 491
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P++ T+N+ + L + +A + MQ+ ++ D VTY VI+G C++
Sbjct: 492 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 551
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ A ++ ++ + L P+ Y TM+ LC +G
Sbjct: 552 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 587
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA ++ M F +M G + N ++ ++ D+ Q F ++ + F I
Sbjct: 443 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISP 501
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI+++NI++ C+ G L+KA ++ +MQK + D++TYTT+I K + E W
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---W 558
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+L C +L G++PD VTY ++ G C
Sbjct: 559 SLF----CSLSLK----------------------------GLKPDIVTYTTMMSGLCTK 586
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G L + +Y+ M LM N +GD L+ + K + + PS+
Sbjct: 587 GLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSL 635
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 79 NKYAFEDTVSR---LAGARRFDYIEHLLEHQKSLPQ----GRREGFIMRIMMLYGKAGMI 131
+K+ F D V+ + G ++ +E +E + + Q G + + I L+ +AG
Sbjct: 1003 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDC 1061
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFN 190
A + F +M G + + N L L ++ L KA+ F E ++ ++ I+++N
Sbjct: 1062 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF--EYLQRSKMEPTIYTYN 1119
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I+ C+ G ++ + + + GVKPDV+ Y T+IS F + E + L+ M
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +N I+ + + +L+ M+ G D T LV G LD
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 1236
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 1/289 (0%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S +A +FD + L E ++L ++ + + + A+ M
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + +L++ L S+ + A + ++ + Q + +FN +I
Sbjct: 758 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY-QPNTVTFNTLIHGLFLHNKA 816
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A ++ M G +PD++TY +++ K ++ L N M P + +N
Sbjct: 817 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + A L M+ GI P+ VTY+ +I C G A ++ S M+ R++
Sbjct: 877 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ + +I +EG A + + +K++ PS+ T S+L+ G
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 985
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ M+ F +M G + N ++ L ++ D Q E+ + +I ++N
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYN 1084
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L+ + K
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ +N I K +A+ L M+ G P+ YN +I+ R G + +
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 311 KKVYSAM 317
++ M
Sbjct: 1205 AELIKEM 1211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + EM K P +I ++ L+SA K N+ ++ L M G N T+++
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++G M + G EP+ VT + ++ G+C S + A + M
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
PN + T+IH L + A + + K P + T ++ GL K
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L++ MV FP++ FN + +V ++ L M+ GI D T+N+VI FC
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 234
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ +A + ML P+R ++++ C+ + A + ++ + P +
Sbjct: 235 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 294
Query: 363 TISALLEGLKKNNQPCKANTIMALVQRR 390
+A+++ L K + A ++R+
Sbjct: 295 AYNAIIDSLCKTKRVNDAFDFFKEIERK 322
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 4/312 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
N Y + +S +R + H + +P +M ++M + I A+ F
Sbjct: 367 NVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLM---ENMEIDSALIVF 423
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M +GC S N ++ D + + L + K + ++NI+IK +C+
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM-LKGRPTPTLVTYNIIIKGYCD 482
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G D A V+ M+ G +PD +YT LIS F K ++ E+ +G++N M+ +G PN T
Sbjct: 483 SGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVT 542
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ I + A +++ M+R G P+ TYN++I G + + A+++ ML
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVML 602
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
++ P+ Y T+I+ LC G LA M +K +P++ T S+L++ L + +
Sbjct: 603 EEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVE 662
Query: 379 KANTIMALVQRR 390
+A + + ++++
Sbjct: 663 EAEEMFSELKKQ 674
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 147/357 (41%), Gaps = 48/357 (13%)
Query: 58 RDPEKLFQLFKANAHNRIVIE----NKYAFEDTVSRLAGARR----FDYIEHLLEHQKSL 109
RD + F++F NR+ E N + ++ L + R D+I + H L
Sbjct: 277 RDLDSAFEIF-----NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH-GVL 330
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK----------- 158
P F I+ L G I+ A F DM GCK V + + +
Sbjct: 331 PT--VHTFTAPIVALC-DMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGL 387
Query: 159 --------VLTESRDLKAIQAFLMEVPE--KFHIQFDIF----------SFNIVIKAFCE 198
V+ + A+ LME E I F++ S+N +I+ +C
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+G +KA ++ M K P ++TY +I + ++ + LM GC P+ +
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ I + A+ + M G+ P+EVTY +I G+C+ LD A ++ M
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
PN + Y +IH L ++ +F+ A +CK +++ P V T S ++ GL N
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N VI A C+ G + A ++ ++ K G+KPD TYT++I + ++ +
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M +GC PN AT++ I L N R +A + M R G+ P T+ I
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQEGDFNLAYIMCKDSMKKNWVPS 360
C G ++ A K++ M + PN Y ++I L + M +D + VP+
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGV----VPN 399
Query: 361 VDTISALLEGLKKN 374
T +AL+ L +N
Sbjct: 400 TVTYNALMNVLMEN 413
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N++I + A + M + + PDV+TY+T+I+ + + ++
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV GC PNL T++ IQ L + R +A ++ +++ G+ PDEVTY +I+ S
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMS 693
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G +D A M+ P + Y +I L E
Sbjct: 694 GKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I +C+ LD A ++ M++ G +P+V TY LI K N L +M
Sbjct: 542 TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 601
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ + P++ T++ I L N A ++ M + G P+ TY+ +I+ + G +
Sbjct: 602 LEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRV 661
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A++++S + + L+P+ Y MI G + A+ + + P++ T L
Sbjct: 662 EEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVL 721
Query: 368 LEGLK 372
++GL+
Sbjct: 722 IKGLQ 726
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G K + TYTTL+ K N ++ ++ +G PNL +N I L A
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ + + G++PD TY +I G+CR+ LD A ++++ M PN Y T+I+
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLING 307
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC G N A + + +P+V T +A + L
Sbjct: 308 LCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++D+ + ++ E G++P+++ Y ++I+A KD + N + G P+ T+
Sbjct: 212 VMDRYHQILRE----GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYT 267
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I R A ++ M G EP+ TY+ +I G C SG ++ A S M
Sbjct: 268 SMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH 327
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++P + I LC G A+ + D KK P+V T ++L+ G
Sbjct: 328 GVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 97/256 (37%), Gaps = 67/256 (26%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M GC+ V++ N + LT+ + + L +V + I D+ +++ VI C G
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE-LCKVMLEEKISPDVVTYSTVINGLCNNG 624
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN--------------- 245
+ A + +M K G P++ TY++LI A ++ R E +++
Sbjct: 625 AIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYV 684
Query: 246 --LMVC------------------KGCFPNLATFNVRIQHLVNKRRSWQANKLMGL---- 281
+ VC GC P L T++V I+ L N+ +KL+ L
Sbjct: 685 KMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE---MVYHKLVALPNAA 741
Query: 282 ---------------------MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ E Y+ ++ RSG A +Y +M+ +
Sbjct: 742 STSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQ 801
Query: 321 RLMPNRKIYQTMIHYL 336
PN+ Y+ H+L
Sbjct: 802 SQCPNQDTYK---HFL 814
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 3/260 (1%)
Query: 90 LAGA-RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
LAG R FD HL++ KS ++ Y +AG+ A+ F M YGCK
Sbjct: 152 LAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKP 211
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
S + + L + R + F + KF + D+ + ++ +C G + KA V
Sbjct: 212 DKVSFSIVISSLCKKRRASEAELFFDSLKHKF--EPDVIVYTSLVHGWCRAGDIAKAEEV 269
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+M++ GVKP+V TY+ +I + + + + +++ M+ GC PN TFN ++ V
Sbjct: 270 FSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVK 329
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R+ + ++ M+R G D ++YN +I+ C+ +LD A KV M+ + + PN
Sbjct: 330 AGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNAST 389
Query: 329 YQTMIHYLCQEGDFNLAYIM 348
+ ++ + + D N A+ M
Sbjct: 390 FNSIFGCIAELHDVNGAHRM 409
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 7/301 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
+K +F +S L RR E + SL I+ +++G +AG I A +
Sbjct: 212 DKVSFSIVISSLCKKRRASEAELFFD---SLKHKFEPDVIVYTSLVHGWCRAGDIAKAEE 268
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F DM G K V + + + L + E+ + + +FN +++
Sbjct: 269 VFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDA-GCDPNAVTFNSLMRVH 327
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G +K V +M++LG D I+Y LI + KD + + + MV KG PN
Sbjct: 328 VKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNA 387
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+TFN + A+++ M+ P+ +TYN++++ F S +DM K+
Sbjct: 388 STFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKE 447
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNN 375
M + PN Y+ +I C++G +N AY + K+ +++ + P++ +LE L+
Sbjct: 448 MDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAG 507
Query: 376 Q 376
Q
Sbjct: 508 Q 508
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L +LM +G ++TF+V ++ V + +A M+ +G +PD+V++++VI C
Sbjct: 165 LIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLC 224
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ A+ + + L + P+ +Y +++H C+ GD A + D + P+V
Sbjct: 225 KKRRASEAELFFDS-LKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVY 283
Query: 363 TISALLEGLKKNNQPCKANTIMA 385
T S +++ L + Q +A+ + +
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVFS 306
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A TF M K + NA + L ++ + Q LME+ + +
Sbjct: 200 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN-GVNP 258
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +FN +I A+ G L+K ++V+ EMQ+ G+KP+V++Y ++++AF K+ + +
Sbjct: 259 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 318
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M K PN +N I V + QA L+ M+ GI P VTYNL+IKG C
Sbjct: 319 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 378
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+++ +++ RL+P+ Y T+I C G+ + A + + K +V T
Sbjct: 379 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 438
Query: 365 SALLEGL 371
L+ GL
Sbjct: 439 HQLISGL 445
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FS+N+VI G A V EM + V P+ ITY T+I K E G L +
Sbjct: 16 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 75
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY------------ 294
MVC G PN T+NV + L R + + L+ M + PD TY
Sbjct: 76 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 135
Query: 295 -----------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
++++ G C+ G + +A++V +++ L+P R IY T
Sbjct: 136 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 195
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+I+ CQ G+ A+ ++ P T +AL+ GL K + A ++ +Q
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I++ C+ G + A V+ + G+ P + Y TLI+ + + E +
Sbjct: 156 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 215
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + P+ T+N I L R A L+ MQ G+ P T+N +I + R+G
Sbjct: 216 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 275
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ V S M L PN Y ++++ C+ G A + D K+ +P+ +A
Sbjct: 276 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 335
Query: 367 LLE 369
+++
Sbjct: 336 IID 338
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ C G + + ++ EM + PD TY+ L ++ + L+
Sbjct: 86 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 145
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G T ++ + L + A +++ + G+ P V YN +I G+C++G
Sbjct: 146 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 205
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A + M R + P+ Y +I+ LC+ A + + P+V+T +
Sbjct: 206 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 265
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L++ + Q K +++ +Q
Sbjct: 266 LIDAYGRTGQLEKCFIVLSEMQE 288
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 1/244 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M +G K + N L L + + A L E+ + + D F+++I+ G
Sbjct: 76 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP-DGFTYSILFDGLSRNG 134
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ + K GV T + L++ KD + I + +V G P +N
Sbjct: 135 DSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 194
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I A G M+ I+PD +TYN +I G C++ + A+ + M
Sbjct: 195 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 254
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ P + + T+I + G +I+ + + P+V + +++ KN + +A
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314
Query: 381 NTIM 384
I+
Sbjct: 315 VAIL 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P+ +Y +I+ ++ R +++ M + PN T+N I + +L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M G++P+ +TYN+++ G CR+G + + M ++++P+ Y + L +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
GD + +K T S LL GL K+ + A ++
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 178
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 135/270 (50%), Gaps = 10/270 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES---RDLKAIQAFLMEVPEKFHIQ 183
K G + +A+ F M YG + V + + L S RD + +M K I+
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM----KRKIK 243
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ +FN +I AF + G L A + EM ++ + P++ TYT+LI+ + R + +
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ LM KGCFP++ + I ++ A K+ M + G+ + +TY +I+GF
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGL 363
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK---NWVPS 360
G ++A++V+ M+ R + PN + Y ++H LC G N A ++ +D K+ P+
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ T + LL GL N + KA + +Q+R
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQKR 453
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
+ + G + + N + +S +FL ++ K + DIF+F +I FC
Sbjct: 97 LQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL-MKLGFEPDIFTFTSLINGFCLGN 155
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+++A ++ +M ++G+KPDV+ YTT+I + K+ + L+N M G P++ +
Sbjct: 156 RIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYT 215
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L N R A+ L+ M + I+PD +T+N +I F + G L AK++Y+ M+
Sbjct: 216 SLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQM 275
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ PN Y ++I+ LC EG + A M K P V ++L+ G K
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCK 328
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 18/230 (7%)
Query: 160 LTESRDLKAIQAF--LMEVPEKF-----------HIQF-----DIFSFNIVIKAFCEMGI 201
+ ESR L +I F L+ V K H+Q D+++ N+++ FC+
Sbjct: 62 MVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQ 121
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
A + ++ KLG +PD+ T+T+LI+ F NR E + N MV G P++ +
Sbjct: 122 PCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTT 181
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L A L M+ +GI PD V Y ++ G C SG A + M+ R+
Sbjct: 182 IIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK 241
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ P+ + +I +EG A + + ++ + P++ T ++L+ GL
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F ++ +M D + +Q +GV D+ T L++ F + ++P + +
Sbjct: 71 IIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLG 130
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ G P++ TF I R +A ++ M GI+PD V Y +I C++G
Sbjct: 131 KLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNG 190
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A +++ M + P+ +Y ++++ LC G + A ++ + MK+ P V T +
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250
Query: 366 ALLEGLKKNNQ 376
AL++ K +
Sbjct: 251 ALIDAFVKEGK 261
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 7/214 (3%)
Query: 162 ESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
E R +A Q F LME F D+ ++ +I FC+ ++ A + EM + G+ +
Sbjct: 294 EGRLDEARQMFYLMETKGCFP---DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
ITYTTLI F +P + ++ MV +G PN+ T+NV + L + +A +
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410
Query: 281 LMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
MQ+ G+ P+ TYN+++ G C +G L+ A V+ M R + Y +I +C
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ G A + K P+V T + ++ GL
Sbjct: 471 KAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL 504
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
MVE + L P +I +T L++ K + ++ L + G +L T N+ +
Sbjct: 62 MVESRPL---PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQ 118
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ A+ +G + + G EPD T+ +I GFC ++ A + + M+ + P+ I
Sbjct: 119 SSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVI 178
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALV 387
Y T+I LC+ G + A + P V ++L+ GL + + A+ ++ ++
Sbjct: 179 YTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM 238
Query: 388 QRRV 391
+R++
Sbjct: 239 KRKI 242
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 2/265 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ D+ +GC+ V S NA LK L ++ +Q LME + +I +
Sbjct: 206 GSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE-LMEEMVRMACPPNIVT 264
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I C G+ ++ + V+ +M + G PD+ Y T+I K+ ++ + + N M
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP 324
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N ++ L + R + +L+ M D+VT+N+++ FC++G +D
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ ML MP+ Y T+I+ C+EG + A ++ K P+ + + +L
Sbjct: 385 RVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444
Query: 369 EGLKKNNQPCKANTIMA-LVQRRVP 392
+GL + A +M+ ++Q+ P
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCP 469
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A + M YG K V N LK L + + + L E+ +K D
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK-DCPLDD 367
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M G PDVITYTT+I+ F K+ + L
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A LM M + G + +T+N +I C+ G
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G + A + + K P+ S+
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 548 IASALSREGR 557
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ---FD 185
G I A+ +M GC + L+ ++ + V E H + D
Sbjct: 136 GRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSA----VRVLEDLHARGCALD 191
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N+V+ A C+ G +DKA ++ ++ G +PDV++Y ++ R L
Sbjct: 192 VGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME 251
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV C PN+ TFN I +L + ++++ M G PD Y +I G C+ G
Sbjct: 252 EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEG 311
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
HL +A ++ + M L PN Y T++ LC
Sbjct: 312 HLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +L H G I ++ G K G+I A+ M GCK
Sbjct: 385 RVIELLEQMLVH------GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + + + ++ ++ + +FN +I C+ G++++A ++ +
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + + L N+MV KG PN ++ L + R
Sbjct: 498 MLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +Q I D V YN VI C+ G + A + + M+ +PN Y
Sbjct: 558 INKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTI 617
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 618 LIRGLASEG 626
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 123/296 (41%), Gaps = 7/296 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R++ E LL K P + I++ + + G++ +
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL---DDVTFNILVDFFCQNGLVDRVI 387
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M ++GC V + + + L L++ + + S+ IV+K
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCK-EGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C A +M +M + G + IT+ TLI+ K E L M+ GC P+
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M G+ P+ + Y+ + R G ++ +++
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + + +Y +I LC+ G+ A + VP+ T + L+ GL
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ V++A C G + A V+ EM + G P Y ++ A + +
Sbjct: 123 YTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLED 182
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +GC ++ N+ + + ++ +A L+ + FG EPD V+YN V+KG C +
Sbjct: 183 LHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKR 242
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+++ M+ PN + T+I YLC+ G F + + + P + +
Sbjct: 243 WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYAT 302
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+++G+ K A+ I+ R+P +
Sbjct: 303 IIDGICKEGHLKVAHEIL----NRMPSYG 327
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G+++ A++ M + GC + S + + L ++ K +A L+ V + +
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG--KTDEALELLNVMVNKGMSPN 541
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ + A G ++K + +Q ++ D + Y +IS+ K E
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-----------LMQRFGI 287
MV GC PN +T+ + I+ L ++ +A +++ LM+ FGI
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGI 654
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 144/291 (49%), Gaps = 7/291 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGF------IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
F I + E Q+ + R +G I+ ++G +K A+ F +M G +
Sbjct: 305 FSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPS 364
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
+ A + + ++ ++A Q + E+ K I + FN +I +CE G++D+A +
Sbjct: 365 AHTYGALIHGVCKAGQMEAAQMLVNEMQGK-GIDLNPVIFNTLIDGYCESGMVDEALRLQ 423
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
V M+K G++ DV Y ++ S K NR + GL MV +G PN +F I +
Sbjct: 424 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKE 483
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A ++ M+ G P+ +TYN++I G+ + G++ A K+ + R L+P+
Sbjct: 484 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 543
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
++IH C +G ++A + + ++ VP+V T +A++ GL K+ + +A
Sbjct: 544 TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
++ Q E+ EK I+ D++ + +I C G + +A ++ EM G+ P TY
Sbjct: 311 IEEAQRLFEEMREK-GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 369
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI K + E L N M KG N FN I +A +L +M++
Sbjct: 370 ALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKK 429
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+E D YN + G C+ D AK + +M+ R + PN + T+I C+EG+F A
Sbjct: 430 GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 489
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ ++ +K VP++ T + L++G K +A+ + ++ R
Sbjct: 490 KRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 5/259 (1%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+E F + +Y M A++ F M G +S L L + + F
Sbjct: 154 KEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFF 213
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ ++ ++S IV+ C+ G ++ +M E+ GVK +V+TY I ++K
Sbjct: 214 RRMV-NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK 272
Query: 234 DNRPEIGN--GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
R ++G + LM +G N+ T+ + I N + +A +L M+ GIE D
Sbjct: 273 --RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 330
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
Y +I CRSG++ A ++ M + L+P+ Y +IH +C+ G A ++ +
Sbjct: 331 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 390
Query: 352 SMKKNWVPSVDTISALLEG 370
K + + L++G
Sbjct: 391 MQGKGIDLNPVIFNTLIDG 409
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A++AF + FHI D S + + A G +D M L V+ V + T
Sbjct: 173 EALEAFEHMEKKGFHI--DERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
++ K E+G L + + KG N+ T+N I+ + +++ LM++ G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ + VTY L+I GF G ++ A++++ M + + + +Y ++I C+ G+ A
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
++ + K +PS T AL+ G+ K Q
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 380
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 144/291 (49%), Gaps = 7/291 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGF------IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
F I + E Q+ + R +G I+ ++G +K A+ F +M G +
Sbjct: 309 FSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPS 368
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
+ A + + ++ ++A Q + E+ K I + FN +I +CE G++D+A +
Sbjct: 369 AHTYGALIHGVCKAGQMEAAQMLVNEMQGK-GIDLNPVIFNTLIDGYCESGMVDEALRLQ 427
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
V M+K G++ DV Y ++ S K NR + GL MV +G PN +F I +
Sbjct: 428 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKE 487
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A ++ M+ G P+ +TYN++I G+ + G++ A K+ + R L+P+
Sbjct: 488 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 547
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
++IH C +G ++A + + ++ VP+V T +A++ GL K+ + +A
Sbjct: 548 TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
++ Q E+ EK I+ D++ + +I C G + +A ++ EM G+ P TY
Sbjct: 315 IEEAQRLFEEMREK-GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 373
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI K + E L N M KG N FN I +A +L +M++
Sbjct: 374 ALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKK 433
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+E D YN + G C+ D AK + +M+ R + PN + T+I C+EG+F A
Sbjct: 434 GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 493
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ ++ +K VP++ T + L++G K +A+ + ++ R
Sbjct: 494 KRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 5/259 (1%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+E F + +Y M A++ F M G +S L L + + F
Sbjct: 158 KEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFF 217
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ ++ ++S IV+ C+ G ++ +M E+ GVK +V+TY I ++K
Sbjct: 218 RRMV-NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK 276
Query: 234 DNRPEIGN--GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
R ++G + LM +G N+ T+ + I N + +A +L M+ GIE D
Sbjct: 277 --RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 334
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
Y +I CRSG++ A ++ M + L+P+ Y +IH +C+ G A ++ +
Sbjct: 335 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 394
Query: 352 SMKKNWVPSVDTISALLEG 370
K + + L++G
Sbjct: 395 MQGKGIDLNPVIFNTLIDG 413
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A++AF + FHI D S + + A G +D M L V+ V + T
Sbjct: 177 EALEAFEHMEKKGFHI--DERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
++ K E+G L + + KG N+ T+N I+ + +++ LM++ G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ + VTY L+I GF G ++ A++++ M + + + +Y ++I C+ G+ A
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
++ + K +PS T AL+ G+ K Q
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 384
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 135/297 (45%), Gaps = 9/297 (3%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
+ + LA F HLL+ ++++P R I ++ Y +A M A D F
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAVPISSR--LIFALIRRYVRAEMPSEAADLFRR 195
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKA-IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M YG + A+L + L + QA F D+ + V+ A+C
Sbjct: 196 MEEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVF--TPDVVLYTAVVHAWCRA 253
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G LD+A V EMQ+ G+ P+V TYT +I A Y+ + L M+ GC PN ATF
Sbjct: 254 GQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATF 313
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC--RSGHLDMAKKVYSAM 317
N ++ V RS Q ++ M + EPD +TYN +I+ C G+LD A KV M
Sbjct: 314 NAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDKM 373
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ ++ +P+ + M L G+ A+ + + + P+V T + LL+ K
Sbjct: 374 IAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKE 430
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 4/273 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + +AG + A F +M G V + A + + + + Q L ++ +
Sbjct: 246 VVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDS- 304
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ +FN +++A + G ++ V +M +L +PD+ITY LI + +
Sbjct: 305 GCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLD 364
Query: 241 NGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L L M+ K C P+ TFN + LV A+KL M+ +P+ VTYN ++
Sbjct: 365 AALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLL 424
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNW 357
K F + +DM ++ M + PN Y +I C G++ A+ K+ + +K++
Sbjct: 425 KLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEKSF 484
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
PS +L L+K Q K ++ L+ R
Sbjct: 485 KPSKQVRDMVLVLLRKAGQLKKHEELVELMVDR 517
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 8/324 (2%)
Query: 49 PALVKLKAERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEHLLEHQK 107
P + ++K DPE+ LF + + + Y ++ + +LA +R FD +E +L H K
Sbjct: 44 PFVTEVKTVEDPEEALSLF--HRYKEQGFRHYYPSYAALLYKLARSRMFDAVETILAHMK 101
Query: 108 SLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
RE + + YG + A++ F M + C RT++S NA L VL ++
Sbjct: 102 DTEMQCRESVFIALFQHYGP----EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFD 157
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E + + +FNI++K G KA V EM + V+P V+TY +L
Sbjct: 158 EANDIFGKSYE-MGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSL 216
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I + + L M KG N T+ + ++ L + ++ +A KLM M G
Sbjct: 217 IGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGC 276
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+ V + +++ + G ++ AK + M RRL P+ Y +I+YLC+EG AY
Sbjct: 277 KAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYK 336
Query: 348 MCKDSMKKNWVPSVDTISALLEGL 371
+ + VP+ T +++GL
Sbjct: 337 VLLEMQIGGCVPNAATYRMVVDGL 360
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A M GC V + + L + DL + L E+ K +Q
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQP 489
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF++N ++ C+ G +++A ++ E + G+ D +TYTTL+ A+ K + +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P + TFNV + KL+ M GI P+ T+N ++K +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+L A +Y M R + P+ K Y+ ++ C+ + A+ + ++ K + SV T
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
S L++G K + +A + ++R
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++A F E+ + I D+ ++ +I FC++G + +A + EM G++PD +T+
Sbjct: 366 DIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T LI+ + K + + N M+ GC PN+ T+ I L + AN+L+ M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G++P+ TYN ++ G C+SG+++ A K+ L + Y T++ C+ G+ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGL 371
A + K+ + K P++ T + L+ G
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 25/299 (8%)
Query: 99 IEHLLEHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
I L E +++ + R+G + ++ + K G I+ A FY+MH V +
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAY 206
A + + D+ +E + FH F D +F +I +C+ G + A+
Sbjct: 389 YTAIISGFCQIGDM-------VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V M + G P+V+TYTTLI K+ + N L + M G PN+ T+N + L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+A KL+G + G+ D VTY ++ +C+SG +D A+++ MLG+ L P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+ +++ C G + + K P+ T ++L++ Q C N + A
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK------QYCIRNNLKA 614
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G IK A M L G V S + + +L + L+EV ++ ++ + +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK-LIEVMKRKGLKPNSYI 318
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C + L +A EM + G+ PD + YTTLI F K + + M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ P++ T+ I +A KL M G+EPD VT+ +I G+C++GH+
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V++ M+ PN Y T+I LC+EGD + A + + K P++ T ++++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
GL CK+ I V + V F + L+A
Sbjct: 499 NGL------CKSGNIEEAV-KLVGEFEAAGLNA 524
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFL--------MEVPEKFHIQFDIFS------------F 189
++SL + + S+DLK Q+ + + V + F FD+ F
Sbjct: 119 LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVF 178
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD------------NRP 237
++ + + G+L +A V +M G+ V + ++ KD P
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 238
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E+G VC N+A++N+ I + R +A+ L+ LM+ G PD ++Y+ V
Sbjct: 239 EVG-------VCW----NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+CR G LD K+ M + L PN IY ++I LC+ A + +++
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 358 VPSVDTISALLEGLKK 373
+P + L++G K
Sbjct: 348 LPDTVVYTTLIDGFCK 363
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + ++M G + + + N+ + L +S +++ + E E + D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADT 526
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ A+C+ G +DKA ++ EM G++P ++T+ L++ F E G L N
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE--------------- 291
M+ KG PN TFN ++ + A + M G+ PD
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 292 --------------------VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
TY+++IKGF + A++V+ M L +++I+
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y K+G + A + +M G + T+ + N + L+ + L + K
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK- 590
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I + +FN ++K +C L A + +M GV PD TY L+ K +
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
L+ M KG +++T++V I+ + +++ +A ++ M+R G+ D+ ++
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ E+ I D+F+F+
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFS 125
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + P ++TY++LI+ F +R + ++ MV K
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFP++ T+N I+ +R + ++ M + G+ + VTYN++I+G ++G DMA
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++++ M+ + PN Y T++ LC+ G A ++ + + P++ T + ++EG
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 306 M------CKAGKV 312
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ ++ +++ +I C G A ++ +M + + PDV T++ LI AF K+ +
Sbjct: 78 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 137
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ MV + P++ T++ I R +A ++ M PD VTYN +
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
IKGFC+ ++ +V+ M R L+ N Y +I L Q GD ++A + K+ +
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P++ T + LL+GL KN + KA + +QR
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ +V+ C+ G D A+ ++ +M++ ++P V+ Y T+I K +
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I PD T++ +I F
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P V
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192
Query: 363 TISALLEGLKK 373
T + L++G K
Sbjct: 193 TYNTLIKGFCK 203
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H D+ ++N +IK FC+ +++ V EM + G+ + +TY LI ++ ++
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 245
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ MV G PN+ T+N + L + +A + +QR +EP TYN++I+G
Sbjct: 246 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 305
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G ++ ++ + + + P+ Y TMI C++G A + K+ + +P+
Sbjct: 306 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365
Query: 361 VDTISALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 366 SGCYNTLIRARLRDGDREASAELI 389
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I I +++ +I FC LD+A + M PDV+TY TLI F K R E
Sbjct: 149 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 208
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G ++ M +G N T+N+ IQ L A ++ M G+ P+ +TYN ++
Sbjct: 209 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 268
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L+ A V+ + ++ P Y MI +C+ G + + C S+ K
Sbjct: 269 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGV 327
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P V + ++ G + +A+ +
Sbjct: 328 KPDVVAYNTMISGFCRKGSKEEADAL 353
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + MV KGC P+L T+ V + L + + A L+ M++ +EP + YN +I G C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ H+D A ++ M + + PN Y ++I LC G ++ A + D +++ P V
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 363 TISALLEGLKKNNQPCKANTIM-ALVQRRV 391
T SAL++ K + +A + +V+R +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSI 152
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 79 NKYAFEDTVSR---LAGARRFDYIEHLLEHQKSLPQ----GRREGFIMRIMMLYGKAGMI 131
+K+ F D V+ + G ++ +E +E + + Q G + + I L+ +AG
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDC 242
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFN 190
A + F +M G + + N L L ++ L KA+ F E ++ ++ I+++N
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF--EYLQRSKMEPTIYTYN 300
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I+ C+ G ++ + + + GVKPDV+ Y T+IS F + E + L+ M
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +N I+ + + +L+ M+ G D T LV G LD
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 417
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ M+ F +M G + N ++ L ++ D Q E+ + +I ++N
Sbjct: 207 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYN 265
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L+ + K
Sbjct: 266 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 325
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ +N I K +A+ L M+ G P+ YN +I+ R G + +
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385
Query: 311 KKVYSAM 317
++ M
Sbjct: 386 AELIKEM 392
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G +PD++TY +++ K ++ L N M P + +N I L + A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L M+ GI P+ VTY+ +I C G A ++ S M+ R++ P+ + +I
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+EG A + + +K++ PS+ T S+L+ G
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 279 MGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
M L+ R G +PD VTY +V+ G C+ G D+A + + M +L P IY T+I
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
LC+ + A + K+ K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 117
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + N+ ++ L L ++ E+ I ++ +F+
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 313
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T+N I+ +R + +L M + G+ + VTYN +I+G ++G DMA
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+K++ M+ + P+ Y ++ LC+ G A ++ + K P + T + ++EG
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 493
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 494 M------CKAGKV 500
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I +D++S+NI+I FC L A V+ +M KLG +PD++T ++L++ +
Sbjct: 86 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 145
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + M PN TFN I L ++ +A L+ M G +PD
Sbjct: 146 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 205
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY V+ G C+ G +D+A + M ++ + IY T+I LC + N A + +
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 265
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T ++L+ L + A+ +++ +++R++
Sbjct: 266 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 305
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L ++ EK I+ D+ + +I A C ++
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVND 257
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G++P+V+TY +LI R + L + M+ + PN+ TF+ I
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ + P
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
N Y T+I C+ + ++ ++ V + T + L++GL
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+F++ V+ C+ G +D A ++ +M+K ++ DV+ YTT+I A
Sbjct: 201 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 260
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T+N I+ L N R A++L+ M I P+ VT++ +I F
Sbjct: 261 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 320
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 321 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 380
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L++G CKA +
Sbjct: 381 TYNTLIKGF------CKAKRV 395
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 14/239 (5%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K++N AL + TE D K I+ ++ ++N +I+ C G A ++
Sbjct: 253 KNVNDALNLFTE-MDNKGIRP-------------NVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + + P+V+T++ LI AF K+ + L++ M+ + P++ T++ I
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A + LM P+ VTYN +IKGFC++ ++ +++ M R L+ N Y
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 418
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I L Q GD ++A + K + P + T S LL+GL K + KA + +Q+
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK FC+ +++ + EM + G+ + +TY TLI ++ ++ ++
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L + +A + +Q+ +EPD TYN++I+G C++
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 497
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ ++ + + PN IY TMI C++G A + ++ + +P+ T
Sbjct: 498 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 557
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 558 NTLIRARLRDGDKAASAELI 577
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V + N +K +++ ++ E+ ++ + + ++N +I+ + G D A
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMA 433
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +M GV PD+ITY+ L+ K + E ++ + P++ T+N+ I+
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 493
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ + L + G++P+ + Y +I GFCR G + A ++ M +PN
Sbjct: 494 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y T+I ++GD + + K+ +V TIS ++ L
Sbjct: 554 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 165/353 (46%), Gaps = 8/353 (2%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYA---FEDTVSRLAGARRFDYI 99
+P+ P L L + ++DP+ QLFK +Y+ ++ +++L A+ F+ +
Sbjct: 5 RPITPFRLASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEM 64
Query: 100 EHLLEHQKSLPQ-GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK 158
+ +L K +E I+ YG+A + ++A+ ++ + +RTVKS N+ L
Sbjct: 65 QEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLS 124
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
V +D ++ + + EK + D ++N++I+ FC G LD A V EM GV
Sbjct: 125 VFLMCKDFDKMRELFVGI-EKLG-KADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVS 182
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMV-CKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P+VIT+ LI F R + L MV +PN + I+ + A +
Sbjct: 183 PNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFR 242
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L M R IE D Y+ +I G ++G + A V+ M R P+ Y +I+ C
Sbjct: 243 LKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFC 302
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ DF AY + + ++K P V + + +L L + + +AN + + RR
Sbjct: 303 KDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRR 355
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ D ++ +I + G ++A V +M++ G KPD +TY +I+ F KD E
Sbjct: 251 KIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAA 310
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + MV KGC P++ ++NV ++ L + + +AN L M R G PD V+Y ++ G
Sbjct: 311 YRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDG 370
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
FC A + M+ + +P ++ LC+
Sbjct: 371 FCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCE 408
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+IK C+ G L A+ + EM + ++ D Y+TLIS +K R E G+W M +G
Sbjct: 227 LIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERG 286
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P+ T+NV I + A +L+ M G +PD ++YN++++ G A
Sbjct: 287 YKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEAN 346
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ M R P+ Y+ + C F A + + + K +VP +I + L
Sbjct: 347 DLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRL 406
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N++I FC+ + AY ++ EM + G KPDVI+Y ++ +++ + N L+
Sbjct: 290 DTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLF 349
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC P++ ++ + N + +A ++ M G P + + C
Sbjct: 350 EDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCEG 409
Query: 305 GHLDMAKKVYSAM 317
+ D+ + ++ +
Sbjct: 410 KNEDLLRSAFNTL 422
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 176/392 (44%), Gaps = 61/392 (15%)
Query: 36 PNREPLV--DKPLEPP---------ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFE 84
P+ PLV +PL PP + V R+P L+ L + + N AF+
Sbjct: 16 PSSLPLVLATRPLNPPPSSASLLHESHVAHALRREPNVLYAL-----QHFQYLTNTLAFK 70
Query: 85 DT-------VSRLAGARRFDYIEHLLEHQK--SLPQGRREGFIMRIMMLYGKAGMIKHAM 135
T + +L D + ++L K +P ++ FI ++ Y +G+ A+
Sbjct: 71 HTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPC-SQDSFIC-VLNSYKNSGLGDRAL 128
Query: 136 DTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
FY + +GCK TVK N L +L ES + + + E ++ ++F++N+++K
Sbjct: 129 KMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLK 188
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE---------------- 238
A C+ G LD A ++VEM K G PD ++YTT+++A +D R E
Sbjct: 189 ALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVS 248
Query: 239 --------------IGN--GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+G GL + MV G PN+ +++ I L + A ++G M
Sbjct: 249 VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKM 308
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
R G P+ T++ ++KG+ G + ++ M+ + PN +Y T+++ LC G+
Sbjct: 309 IRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNL 368
Query: 343 NLAYIMCKDSMKKNWV-PSVDTISALLEGLKK 373
A +C K + P+V T S L+ G K
Sbjct: 369 AEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVK 400
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 125/248 (50%), Gaps = 4/248 (1%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+G + V NA + L R+ + + F LM+ + ++ S++ VI ++G +
Sbjct: 241 FGAEGVVSVCNALICGL--CREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEV 298
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+ A V+ +M + G +P+V T+++L+ ++ R G GLW +MV +G PN+ +N
Sbjct: 299 ELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTL 358
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGI-EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ L +A + G M++ P+ TY+ ++ GF ++G L A +V++ M+
Sbjct: 359 LNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCG 418
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
+ PN +Y +M+ LC+ F+ AY + + P+V T + ++GL + A
Sbjct: 419 VRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAM 478
Query: 382 TIMALVQR 389
++ +QR
Sbjct: 479 RVVDQMQR 486
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y G + + + M L G + V N L L S +L + +
Sbjct: 323 LMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDC 382
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ +++ ++ F + G L A V +M GV+P+V+ YT+++ K++ +
Sbjct: 383 FCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQA 442
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M GC P + TFN I+ L R A +++ MQR+G PD TYN ++ G
Sbjct: 443 YRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDG 502
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L A ++ + R++ N Y T+++ G
Sbjct: 503 LFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHG 542
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDI 186
G ++ A+ M GC+ V + ++ +K R + + + + V E ++ ++
Sbjct: 295 VGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEG--VRPNV 352
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+N ++ C G L +A V M+K +P+V TY+TL+ F K + + +WN
Sbjct: 353 VVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWN 412
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G PN+ + + L QA +L+ M G P VT+N IKG C G
Sbjct: 413 KMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGG 472
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ A +V M +P+ + Y ++ L
Sbjct: 473 RVLWAMRVVDQMQRYGCLPDTRTYNELLDGL 503
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 3/182 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + AM M YGC ++ N L L +LK + E+ E+ ++ ++
Sbjct: 471 GGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEER-KVELNLV 529
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-NGLWNL 246
++N V+ F G + V+ M GVKPD IT +I A+ K + L +
Sbjct: 530 TYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRI 589
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS-G 305
K P++ + + N +A + M GI P+ T++++++GF + G
Sbjct: 590 TAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLG 649
Query: 306 HL 307
H+
Sbjct: 650 HM 651
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 120/225 (53%), Gaps = 2/225 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V + NA L L+++ A + F + + + +++++NI+++A C G +A +
Sbjct: 155 SVLAYNAVLLALSDASLTSARRFFDSMLSDG--VAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M+ G P+V+TY TL++AF++ + L +M G PNL TFN + +
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ A K+ M R G+ PD V+YN ++ G+C++G A V++ M + +MP+
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++IH +C+ G+ A + + ++ + T +AL++G K
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK 377
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG A+ F +M G V + + + V+ ++ +L+ + ++ E+ +Q
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER-GLQM 363
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +F +I FC+ G LD A L + M++ +KP V+ Y LI+ + R + L
Sbjct: 364 NEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELL 423
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG P++ T++ I + A +L M G+ PD +TY+ +I+ C
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGE 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M+ L P+ Y ++I C+EG+ A + +K +P V T
Sbjct: 484 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTY 543
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K+ + +A ++
Sbjct: 544 SVLINGLSKSARAMEAQQLL 563
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A + ++M G K V + + + ++ D + ++ EK +
Sbjct: 410 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK-GVLP 468
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ C L A+++ M KLG++PD TYT+LI K+ E L
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ MV G P++ T++V I L R+ +A +L+ + P Y+ +
Sbjct: 529 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA 588
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGFC G ++ A KVY +ML R + +Y +IH C+ G+ A
Sbjct: 589 ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 648
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K ++ + P+ + +L+ GL +N +A+ ++
Sbjct: 649 KQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N V+ A + L A M GV P+V TY L+ A + +
Sbjct: 156 VLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILR 214
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC PN+ T+N + A +L+G+M+ G++P+ VT+N ++ G C++G
Sbjct: 215 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAG 274
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A+KV+ M+ L P+ Y T++ C+ G + A + + +K +P V T +
Sbjct: 275 KMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 334
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
+L+ + K +A T++ ++ R
Sbjct: 335 SLIHVMCKAGNLERAVTLVRQMRER 359
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 95/186 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N ++ AF G +D A ++ M++ G+KP+++T+ ++++ K + E ++
Sbjct: 224 NVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 283
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+ ++N + S +A + M + GI PD VT+ +I C++
Sbjct: 284 DEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 343
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L+ A + M R L N + +I C++G + A + + + PSV
Sbjct: 344 GNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCY 403
Query: 365 SALLEG 370
+AL+ G
Sbjct: 404 NALING 409
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + N+ ++ L L ++ E+ I ++ +F+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 329
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T+N I+ +R + +L M + G+ + VTYN +I+G ++G DMA
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+K++ M+ + P+ Y ++ LC+ G A ++ + K P + T + ++EG
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 510 M------CKAGKV 516
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I +D++S+NI+I FC L A V+ +M KLG +PD++T ++L++ +
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + M PN TFN I L ++ +A L+ M G +PD
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY V+ G C+ G +D+A + M ++ + IY T+I LC + N A + +
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T ++L+ L + A+ +++ +++R++
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L ++ EK I+ D+ + +I A C ++
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G++P+V+TY +LI R + L + M+ + PN+ TF+ I
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ + P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
N Y T+I C+ + ++ ++ V + T + L++GL
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+F++ V+ C+ G +D A ++ +M+K ++ DV+ YTT+I A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T+N I+ L N R A++L+ M I P+ VT++ +I F
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L++G CKA +
Sbjct: 397 TYNTLIKGF------CKAKRV 411
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 14/239 (5%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K++N AL + TE D K I+ ++ ++N +I+ C G A ++
Sbjct: 269 KNVNDALNLFTE-MDNKGIRP-------------NVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + + P+V+T++ LI AF K+ + L++ M+ + P++ T++ I
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A + LM P+ VTYN +IKGFC++ ++ +++ M R L+ N Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I L Q GD ++A + K + P + T S LL+GL K + KA + +Q+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK FC+ +++ + EM + G+ + +TY TLI ++ ++ ++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L + +A + +Q+ +EPD TYN++I+G C++
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ ++ + + PN IY TMI C++G A + ++ + +P+ T
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 574 NTLIRARLRDGDKAASAELI 593
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V + N +K +++ ++ E+ ++ + + ++N +I+ + G D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMA 449
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +M GV PD+ITY+ L+ K + E ++ + P++ T+N+ I+
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ + L + G++P+ + Y +I GFCR G + A ++ M +PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y T+I ++GD + + K+ +V TIS ++ L
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +SRL+ A HL L R F R + +A ++ F +
Sbjct: 97 FAAALSRLSHADAGAAARHLPPVLSLLRASRLPAFSDRPFLPLLRALRPLPSLRLFLSLP 156
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+ + + +S NA L L +R L+ A P K +I ++ S NI++K +G L
Sbjct: 157 SFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGIGDL 216
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+ A V+ EM G+ PDV+TYTT+++A+ E L++ ++ G P+ + V
Sbjct: 217 NSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVL 276
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I + R+ A ++M M G++P+EVTY++VI+ C+ A+ + MLG
Sbjct: 277 IDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGY 336
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
+P+ + ++ LCQ+G A M + +KK+ P +S L+ L K +A
Sbjct: 337 VPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARK 396
Query: 383 IMALVQR 389
+ ++R
Sbjct: 397 LFDELER 403
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 117/295 (39%), Gaps = 40/295 (13%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ +M +G V + L DL+ Q ++ + D
Sbjct: 214 GDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGR-RPDATM 272
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK--------------- 233
+ ++I +C L A +M EM GV+P+ +TY+ +I A K
Sbjct: 273 YTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREML 332
Query: 234 --------------------DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
D + N +W MV K P+ + I L K
Sbjct: 333 GAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQ 392
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A KL ++R G P +TYN +I G C +G L A +V+ M+ RR PN Y+ +I
Sbjct: 393 EARKLFDELER-GFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALI 451
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
C+ G N Y + K+ M + PS AL++ L K P +T+ +V+
Sbjct: 452 KGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSK---PSHDDTVCTIVE 503
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + ++ F +M G V + + + ++ +L+ A + ++ E+ ++
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER-GLRM 326
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +F +I FC+ G LD A L + EM+K G++P V+ Y LI+ + K R ++ L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K P++ T++ I A +L M + G+ PD +TY+ +I+G C
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L+ A +++ ML + P+ Y T+I C+EG+ A + + ++K +P V T
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K+ + +A+ ++
Sbjct: 507 SVLINGLSKSARTKEAHRLL 526
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 122/226 (53%), Gaps = 3/226 (1%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V + NA L L+++ L + + FL + + + +++++NI+++A C G L++A V
Sbjct: 117 SVPAYNAVLLALSDA-SLPSARRFLSSML-RHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLV 267
+ +M+ G P+ +TY TL++AF + + + +LM +G PNL TFN + L
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R A K+ M R G+ PD V+YN ++ G+C+ G L + V+S M R L+P+
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++IH C+ G+ A + ++ + T +AL++G K
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 44/330 (13%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
+ L ARRF + +L H + P ++R + G+ ++ A+ DM GC
Sbjct: 131 ASLPSARRF--LSSMLRHGVA-PNVYTYNILVRALCARGR---LEEAVGVVGDMRGAGCA 184
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ N + + +L + + + E+ + + ++ +FN ++ C+ G ++ A
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 244
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
V EM + G+ PDV++Y TL+S + K +++ M +G P++ TF I
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 304
Query: 268 NKRRSWQANKLM------GL-----------------------------MQRFGIEPDEV 292
QA L+ GL M++ GI+P V
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
YN +I G+C+ G +D+A+++ M +R+ P+ Y T+I C+ G+ + A+ + +
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 353 MKKNWVPSVDTISALLEGL---KKNNQPCK 379
+KK +P T S+L+ GL K+ N C+
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CE L+ A + M +LGV+PD TYTTLI K+ E L
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ M+ KG P++ T++V I L R+ +A++L+ + PD + Y+ +
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGFC G + A KVY +ML R + +Y +IH C+ G+ A
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 350 KDSMKKNWVPSVDTISALLEGL 371
K ++ + P+ + +L+ GL
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGL 633
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N V+ A + L A + M + GV P+V TY L+ A R E G+ M
Sbjct: 120 AYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGH 306
GC PN T+N + A +++ LM+ G +P+ VT+N ++ G C++G
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A+KV+ M+ L P+ Y T++ C+ G + + + + ++ VP V T ++
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+ K +A ++A ++ R
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRER 322
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G + A M GC V + ++ L L ++ L A L + + +I
Sbjct: 232 KSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT-RSGCSPNI 290
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C++G +D+AY ++ EM G +P+V+TYT L+ AF K + E GL +
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KG PNL T+N + K +A +L+ M + G P+ V+YN VI G C++
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + ML +P+ + T+I +C+ ++AY + + P++ T ++
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+ GL K+ + +A ++ + R+
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRK 494
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ ++ K ++ A M GC V S N + L ++ + L+E
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE-GVLLLEQMLSN 424
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ DI +FN +I A C+ +D AY + +Q+ G P+++TY +L+ K R +
Sbjct: 425 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484
Query: 241 NGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M K GC P++ T+N I L +R +A KL M G+ PD+VTY++VI
Sbjct: 485 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 544
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C+ +D A V ML P Y T+I C+ G+ + A + + + K P
Sbjct: 545 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 604
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQR 389
V T S ++ L K + +A ++ + R
Sbjct: 605 DVVTFSIFIDWLSKRGRLRQAGELLETMLR 634
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V + + DL + ++ E+ + + + ++N ++ C LD
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY-RPNAITYNNIMHGLCSGRKLDS 202
Query: 205 AYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + EM++ G PDV TY+T++ + K + + L MV KGC PN+ T++ +
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLL 262
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + +A L+ M R G P+ VTYN +I G C+ G +D A + M+
Sbjct: 263 HGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 322
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN Y ++ C+ G A + + ++K +VP++ T ++LL+ K ++ +A +
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382
Query: 384 M-ALVQRR-VPHFSS 396
+ +++Q+ VP+ S
Sbjct: 383 LSSMIQKGCVPNVVS 397
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC + + N + L +S+ + +A + FL + + + D +++IVI + C+ +D
Sbjct: 496 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG--LAPDDVTYSIVISSLCKWRFMD 553
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V+ M K G P ITY TLI F K + + L++ KG +P++ TF++ I
Sbjct: 554 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 613
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + R QA +L+ M R G+ PD VTYN ++KGFC + + A ++ M
Sbjct: 614 DWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCE 673
Query: 324 PNRKIYQTMIHYL 336
P+ Y T++ +L
Sbjct: 674 PDNATYTTLVGHL 686
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 8/225 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I + LD A ++ EM G P+V +Y T++ F K NR E N LW
Sbjct: 43 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE--NALW 100
Query: 245 NL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L MV +GC P++ ++ I L + +A ++M M + G +P+ +TY ++ GFC
Sbjct: 101 LLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 160
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSV 361
R G LD A ++ M R PN Y ++H LC + A + K+ + P V
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
T S +++ L K+ K + LV+ V S + + S+L
Sbjct: 221 FTYSTIVDSLVKSG---KVDDACRLVEAMVSKGCSPNVVTYSSLL 262
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G + A++ M G + + N + L R L + E+ E
Sbjct: 159 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPP 218
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+++ ++ + + G +D A ++ M G P+V+TY++L+ K + + L
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC PN+ T+N I R +A L+ M G +P+ VTY +++ FC+
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + M+ + +PN Y +++ C++ + A + ++K VP+V +
Sbjct: 339 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398
Query: 365 SALLEGLKK 373
+ ++ GL K
Sbjct: 399 NTVIAGLCK 407
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ ++N ++ C+ D+A ++ EM +K G PD+ITY T+I K R + L
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ G P+ T+++ I L R +AN ++ LM + G +P +TY +I GFC+
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G+LD A ++ +L + P+ + I +L + G A + + ++ VP T
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643
Query: 364 ISALLEG 370
+ LL+G
Sbjct: 644 YNTLLKG 650
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+++ C+ G A L EM K PD +TY T+I+ K +R + L MV G
Sbjct: 16 ILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN+ ++N + R A L+ M G PD V+Y VI G C+ +D A
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+V M+ R PN Y T++ C+ GD + A + + ++ + P+ T + ++ GL
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD VTYN +I G +S LD A ++ M+ PN Y T++H C+ A +
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQR 389
+ + + P V + + ++ GL K +Q +A +M ++QR
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 2/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ + DM + C +V + + L +S + L ++ E ++ +
Sbjct: 82 GRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVVT 139
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I FC++G +D+A ++ +M + PDV TY LI + K RP+ G L MV
Sbjct: 140 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 199
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC PN T+N + LV + A L +M R +P T+NL+I FC+ G LD
Sbjct: 200 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 259
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+A +++ M R +P+ Y MI C+ + A + + + P V T ++++
Sbjct: 260 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 319
Query: 369 EGLKKNNQ 376
GL K +Q
Sbjct: 320 SGLCKASQ 327
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 3/236 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M YGC+ + N + L +S K I AF L ++ + + F+FN++I FC+
Sbjct: 197 EMVKYGCEPNFITYNTLMDSLVKSG--KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 254
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+G LD AY + M G PD+ TY +IS + NR + L M GC P++ T
Sbjct: 255 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 314
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N + L + +A ++ +++ G D VT + +I G C+S LD A+K+ M
Sbjct: 315 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 374
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
P+ Y +IH C+ + + + + K VP+V T S +++ L K+
Sbjct: 375 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS 430
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI+++NI+I C +D A ++ M + G PDV+TY +++S K ++ + ++
Sbjct: 276 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 335
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ G F ++ T + I L RR A KL+ M+R G PD V Y ++I GFC++
Sbjct: 336 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
LD + +S ML + +P Y +I LC+
Sbjct: 396 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 14/251 (5%)
Query: 132 KHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSF 189
+ A D F + HL G C + + + ++RD + QA+ L++ EK I +
Sbjct: 15 QEAYDLFKN-HLCGLCSPDSITYSTLINGFCKARDFQ--QAYRLLDEMEKRGIVPHNAVY 71
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N +IK C+ G +D A + +MQ+ P VITYT L+ A K R + + M+
Sbjct: 72 NTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIE 130
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GC PN+ T+N I +A L M PD TYN++I G+C+
Sbjct: 131 AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQD 190
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAYIMCKDSMKKNWVPSVDTIS 365
K+ M+ PN Y T++ L + G FNLA +M ++++ PS T +
Sbjct: 191 GAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM----LRRDCKPSHFTFN 246
Query: 366 ALLEGLKKNNQ 376
+++ K Q
Sbjct: 247 LMIDMFCKVGQ 257
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L+SAF + + + L+ +C C P+ T++ I R QA +L+ M++ G
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I P YN +IKG C +G +D A Y M R P+ Y ++ LC+ + A
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKK 373
++ +D ++ P+V T + L+ G K
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCK 149
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+A I A M GC V + N+ + L ++ + +A + + EV D
Sbjct: 289 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY--EVLRNGGYFLD 346
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + + +I C+ LD A ++ EM++ G PDV+ YT LI F K ++ + ++
Sbjct: 347 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 406
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
M+ KGC P + T+++ I L R L+ M G+
Sbjct: 407 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 148/320 (46%), Gaps = 11/320 (3%)
Query: 60 PEKLFQLFKANAHNRIVIENKYAFE--DTVSR---LAGARRFDYIEHLLEHQKSLPQGRR 114
P K F+ F + N +++ F D + R L AR F + +E + +
Sbjct: 40 PPKAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFS---IERRSNGSVKIE 96
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
+ F ++ YG AG+ A+ F M G +V + N+ L +L + +
Sbjct: 97 DRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFD 156
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ + + D ++FNI+I+ FC+ ++D+ + EM + +PDV+TY TL+ +
Sbjct: 157 EMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 216
Query: 235 NRPEIGNGLWNLMV--CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ I + + MV K P++ T+ ++ K+ +A + M G++P+++
Sbjct: 217 GKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDI 276
Query: 293 TYNLVIKGFCRSGHLDMAKKVY-SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TYN +IKG C D K++ A+ GR +P+ Y T+++ C G+F+ A M K
Sbjct: 277 TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKK 336
Query: 352 SMKKNWVPSVDTISALLEGL 371
+ P T S L+ L
Sbjct: 337 MKELKVQPDSATYSVLIRNL 356
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 9/269 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ F +M G K + N +K L E + I+ L D ++N
Sbjct: 256 IDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYN 315
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN----- 245
++ A C+ G D+A + +M++L V+PD TY+ LI + E L++
Sbjct: 316 TLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDE 375
Query: 246 --LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
L+ GC P +A +N L ++ +A ++ + + G + D +Y +I G C+
Sbjct: 376 DILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCK 434
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + K+ ML R +P+ + Y +I+ Q+G+ LAY + +K +++P
Sbjct: 435 EGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSV 494
Query: 364 ISALLEGLKKNNQPCK-ANTIMALVQRRV 391
++L L KN+ + A+ ++ ++ R++
Sbjct: 495 FHSILSELLKNDFARESASFVVLMIDRKI 523
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 88/218 (40%), Gaps = 6/218 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ +I C+ G + Y +++ M + PD TY LI+ F + P + M
Sbjct: 424 SYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERM 483
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ P + F+ + L+ + ++ + LM I + ++ SG
Sbjct: 484 LKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLR 543
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + M + + +I ++CQ G A M ++K ++ + +
Sbjct: 544 IKAFQIVELLYDNGYMVD---MEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVV 600
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
+EGL K +P +A + ++ + H QLS + +
Sbjct: 601 IEGLCKMKRPLEAFGLYYMLVEKSNH---QQLSCLEGL 635
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 160/331 (48%), Gaps = 4/331 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P ++KL K+E++P F LF + + + + + RL+ AR ++ +
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLT 161
+E +S E + ++ YGK M A+D F M ++GC+ ++S N L
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFV 125
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E++ +++ L E + ++ ++N++IK C+ +KA + M K G KPDV
Sbjct: 126 EAKQWVKVES-LFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDV 184
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG- 280
+Y+T+I+ K + + L++ M + P++ +N+ I + ++ A +L
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L++ + P+ T+N++I G + G +D K++ M + Y ++IH LC EG
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + A + + +++ V T + +L G
Sbjct: 305 NVDKAESVFNELVERKAFIDVVTYNTMLGGF 335
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+M+ E D++++ +I C+ L++A ++ EM K GV+ + LI
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+D+R + L M GC P + ++N+ I L + +A+ + M G++PD
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK 535
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY++++ G CR +++A +++ L L P+ ++ +IH LC G + A + +
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+N ++ T + L+EG K +A I
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIWG 628
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 2/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G IK +++ + M V S N +K L E+ + +P K +
Sbjct: 335 FCRCGKIKESLELWRIMEQRNSVNIV-SYNILIKGLLENGKIDEATMIWRLMPAKGYAA- 392
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ I I C G ++KA VM E++ G DV Y ++I K R E + L
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G N N I L+ R A+ LM M + G P V+YN++I G C +
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEA 512
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ML L P+ K Y ++ LC++ LA + ++ P V
Sbjct: 513 GKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMH 572
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+ GL + A T+MA ++ R
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHR 598
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 2/184 (1%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
VIK + + + D+A V M+++ G +P + +Y TL++AF + + L+
Sbjct: 84 VIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PNL T+NV I+ K+ +A + M + G +PD +Y+ VI ++G LD A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDA 203
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLE 369
+++ M RR+ P+ Y +I +E D +A + ++ + V P+V T + ++
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263
Query: 370 GLKK 373
GL K
Sbjct: 264 GLSK 267
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S+NI+I CE G +A + EM + G+KPD+ TY+ L+ +D + E+ LW+
Sbjct: 499 VVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWH 558
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ G P++ N+ I L + + A +M M+ + VTYN +++G+ +
Sbjct: 559 QFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVR 618
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A ++ M L P+ Y T++ LC + A D+ P+V T +
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWN 678
Query: 366 ALLEGL 371
L+ +
Sbjct: 679 ILVRAV 684
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/401 (18%), Positives = 165/401 (41%), Gaps = 26/401 (6%)
Query: 20 DAIALNNIRAVSLNKFPNREPLVDKPLEP-----PALVKLKAERDPEKLFQLFKANAHNR 74
+ +AL+ I+ N P+R V K + P + R L F A
Sbjct: 78 EDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGI------RSYNTLLNAF-VEAKQW 130
Query: 75 IVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-------REGF------IMRI 121
+ +E+ +A+ +T + ++ + + +K + R +EGF +
Sbjct: 131 VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTV 190
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ K G + A++ F +M V N + + +D K ++ E
Sbjct: 191 INDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSS 250
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ ++ + NI+I + G +D + M++ + D+ TY++LI + +
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAE 310
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N +V + F ++ T+N + + ++ +L +M++ + V+YN++IKG
Sbjct: 311 SVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGL 369
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+G +D A ++ M + + Y IH LC G N A + ++ K V
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDV 429
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
+++++ L K + +A+ ++ + + +S+ +A
Sbjct: 430 YAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNAL 470
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQ 183
+AG A +M G K +K+ + L L R ++ +E+ +F ++
Sbjct: 511 EAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIE----LALELWHQFLQSGLE 566
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ NI+I C +G LD A VM M+ +++TY TL+ ++K +
Sbjct: 567 PDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVI 626
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
W M G P++ ++N ++ L R A + + GI P T+N++++
Sbjct: 627 WGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVR 682
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 150/330 (45%), Gaps = 29/330 (8%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P ++KL K+E++P +F D+V+R G Y+ H
Sbjct: 6 KSLSPKRVIKLLKSEKNPHSALSIF-----------------DSVTRFPGYSHTPYVFHH 48
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLT 161
+ + P+ + Y K M A+D F MH ++GC+ ++S N+ L L
Sbjct: 49 ILKRLFDPK--------LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 100
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
ES ++F + E + ++ ++NI+IK C DKA ++ M G PDV
Sbjct: 101 ESNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDV 159
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG- 280
+Y TLI++ K+ L++ M +G P++A +N+ I K A+++
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L++ + P+ +YN++I G C+ G D + +++ M + Y T+IH LC G
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + A + K+ + P V + +L G
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNG 309
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 39/332 (11%)
Query: 78 ENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAM 135
++ Y + + L G+ D + +++ G ++ ML G +AG I+ +
Sbjct: 263 QDLYTYSTLIHGLCGSGNLDGATRV--YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 320
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF---------------------- 172
+ + M GC RTV S N ++ L E+ + +AI +
Sbjct: 321 ELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379
Query: 173 -----------LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++E E D F+++ +I C G LD+ V+ +M K G KP+
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+I+ F + ++ E + MV KGCFP + T+N I L R +A L+
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M + G +P+ +TY+L++ G C+ LDMA ++ L + P+ K++ +IH LC G
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + ++N VP++ T + L+EG K
Sbjct: 560 VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + M +GCK NA + + L+ F + K +
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP-TV 474
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + +AY ++ EM + G KP++ITY+ L++ + + ++ LW
Sbjct: 475 VTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQ 534
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P++ N+ I L + + A +L M++ P+ VT+N +++GF +
Sbjct: 535 ALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRD 594
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A K++ +L L P+ Y + LC + A D++ + +P+ T +
Sbjct: 595 FERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNI 654
Query: 367 LLEG 370
L++G
Sbjct: 655 LVQG 658
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEI 239
HI +F +V A+ + + D+A + M ++ G +P + +Y +L++A + N+ +
Sbjct: 48 HILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDE 107
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ G PNL T+N+ I+ K++ +A +L+ M G PD +Y +I
Sbjct: 108 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLIN 167
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV- 358
++G++ A K++ M R + P+ Y +I ++GD A + + +K V
Sbjct: 168 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 227
Query: 359 PSVDTISALLEGLKK 373
P++ + + ++ GL K
Sbjct: 228 PNIPSYNVMINGLCK 242
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P + ++N + L+ + +A + G+ P+ TYN++IK CR D A
Sbjct: 84 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K++ + M G+ P+ Y T+I+ L + G + A + + ++ P V + L++G
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203
Query: 371 LKKNNQPCKANTI 383
K A+ I
Sbjct: 204 FFKKGDILNASEI 216
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 107 KSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
++L +G + M ++++G +G ++ A+ + +M C + + N ++ + R
Sbjct: 534 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVR 593
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D + + + + +Q DI S+NI +K C + A + + GV P IT+
Sbjct: 594 DFERASKIWDHILQ-YGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITW 652
Query: 225 TTLISAF 231
L+ +
Sbjct: 653 NILVQGY 659
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 159/391 (40%), Gaps = 38/391 (9%)
Query: 16 AAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRI 75
A A+ LN+ + +L + + + P ++K P+ L FK +H+
Sbjct: 29 ATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKAL-HFFKILSHHPS 87
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
+F+ + A R F + L+ +S G I Y G A+
Sbjct: 88 YCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAV 147
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
F MH YGC + + S N L VL +S+ ++ + KF + D S+NI++
Sbjct: 148 TVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKF--KADCVSYNIIVNG 205
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG------------- 242
+C + KA ++ EM + G+ P++ TY +++ +++ + G
Sbjct: 206 WCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDID 265
Query: 243 ----------------------LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
++N MV G P++ATFN IQ L K A +
Sbjct: 266 VVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFE 325
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M + G P+ +TYNLVI+G C G + A ++ M PN + Y +I Y C G
Sbjct: 326 EMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAG 385
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + + + +P++DT + L+ +
Sbjct: 386 EIEKGLDLFQKMGNGDCLPNLDTYNILINSM 416
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G G IK A + F M G +V + NA +++L + ++ E+ ++ ++
Sbjct: 277 GVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNS 336
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N+VI+ C +G + +A +M M+ +P+V TY LI F E G L+
Sbjct: 337 I-TYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQ 395
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRS---WQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M C PNL T+N+ I + ++ S A KL+ M G P ++T+N V+ G
Sbjct: 396 KMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLL 455
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNR 326
+G+ D AK++ S G +P +
Sbjct: 456 LTGNQDFAKEILSLQGGCGRLPRK 479
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S + A+ + RD + + FL+ + +F I+ + + MG +A V +
Sbjct: 94 SFDHAIDICARLRDFRTLW-FLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMS 152
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF-PNLATFNVRIQHLVNKR 270
M + G D+ ++ T++ K R E+ L+ + KG F + ++N+ + +
Sbjct: 153 MHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKAL--KGKFKADCVSYNIIVNGWCLIK 210
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R+ +A +++ M G+ P+ TYN+++ G+ R+G + A + M R+ + Y
Sbjct: 211 RTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYT 270
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
++IH L G+ A + +K +PSV T +AL++ L K +
Sbjct: 271 SVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDS 316
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 139/278 (50%), Gaps = 4/278 (1%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ A+D FY M G TV + N+ + + S K E+ E ++++ D+ +F
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE-WNMKPDVVTF 317
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I++ A C+ G++ +A V +M ++ ++PD++TY++LI K + + + L N M+
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+ P++ TF++ + K +A ++ LM G+ P+ VTYN ++ G+C +D
Sbjct: 378 RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDE 437
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+KV+ M+ + P+ Y +I C+ + A + + K P+ T + L+
Sbjct: 438 ARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLIS 497
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
GL + +P A L ++ H L + ++LS
Sbjct: 498 GLCQAGRPYAAK---ELFKKMGSHGCPPDLITYSTLLS 532
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 132/264 (50%), Gaps = 22/264 (8%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMD---TFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAI 169
+EG ++ + ++GK MI+ AM+ Y ++G CK ++ ++ L SR+++
Sbjct: 326 KEGVVLEALSVFGK--MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP- 382
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
D+ +F+I + FC+ G++ +A ++ M + G++P+V+TY +L+
Sbjct: 383 ---------------DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMD 427
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ ++ + ++++MV KGC P++ ++N+ I+ R +A +L M G+ P
Sbjct: 428 GYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +T+ +I G C++G AK+++ M P+ Y T++ C+ G + A +
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547
Query: 350 KDSMKKNWVPSVDTISALLEGLKK 373
+ K P+ LL G+ K
Sbjct: 548 EALKKSQLKPNHVICKILLGGMCK 571
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 120/247 (48%), Gaps = 3/247 (1%)
Query: 145 GCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
G K ++ + N + L E R ++A++ + + Q +++ +++ C++G
Sbjct: 169 GFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY--QPTVYTHTMIVNGLCKIGKTS 226
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + M +M +L +P+V++Y+ +I + K+ L+ M G P + T+N I
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ N + QA+ L M + ++PD VT+++++ C+ G + A V+ M+ +
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y ++IH +C+ + + + + + +N P V T S ++ K +A +I
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 384 MALVQRR 390
+ L+ R
Sbjct: 407 INLMIER 413
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 78/141 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+NI+IK +C+ +D+A + EM G+ P+ IT+TTLIS + RP L+
Sbjct: 453 DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELF 512
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P+L T++ + +A L +++ ++P+ V +++ G C++
Sbjct: 513 KKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKA 572
Query: 305 GHLDMAKKVYSAMLGRRLMPN 325
G L+ AK+++S++ L P+
Sbjct: 573 GKLEDAKELFSSLSIEELQPD 593
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 100/208 (48%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E F + +++ I+I C + ++ + V+ ++ KLG KP +IT+ TLI+ + R
Sbjct: 131 EFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRI 190
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ ++ +G P + T + + L ++ A M M EP+ V+Y+++
Sbjct: 191 VEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSII 250
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C++ ++ A ++ M + P Y ++I+ +C G + A I+ K+ ++ N
Sbjct: 251 IDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNM 310
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMA 385
P V T S L++ L K +A ++
Sbjct: 311 KPDVVTFSILVDALCKEGVVLEALSVFG 338
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 80/188 (42%), Gaps = 3/188 (1%)
Query: 190 NIVIKAFCEMGIL---DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
N ++ C+ G D A +M + P + + L++A + + ++
Sbjct: 70 NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G ++ T + I L + ++G + + G +P +T+N +I G C G
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + ++ R P + +++ LC+ G + A + K ++ + P V + S
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249
Query: 367 LLEGLKKN 374
+++ L KN
Sbjct: 250 IIDSLCKN 257
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 16/318 (5%)
Query: 78 ENKYAFEDTVSRLAGARRFDYI-------------EHLLEHQKSLPQGRREGFIMRIMML 124
E K FE S RF Y E L + + +G + + M+
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 125 YG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI 182
G KAG + AM F +M + G + + N + +S D+ L E+ + +
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR-KL 447
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
F+++++I C L KA V+ +M + GVKP+V Y TLI A+ +++R E+
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L +M+ G P+L +N I L ++ +A L+ M GI+P+ TY I +
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+SG + +A++ + ML ++PN IY +I C G+ A K ++K +P +
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627
Query: 363 TISALLEGLKKNNQPCKA 380
SA++ L KN + +A
Sbjct: 628 AYSAIIHSLSKNGKTKEA 645
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 41/259 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F +N +I C +++A +++V+M + G+KP+ TY I+ + K ++ +
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579
Query: 245 NLMVCKGCFPN--------------------LATFNVRIQH-LVNKRRSWQA-------- 275
M+ G PN L+TF ++ L+ R++ A
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639
Query: 276 ---NKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ MG+ +F G+ PD YN +I GFC+ G ++ A ++Y ML + PN +Y
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699
Query: 330 QTMI--HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
T+I + C+ G+ A+ + + + K P L++G K KA ++
Sbjct: 700 NTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA 759
Query: 388 QRRVPHFSSNQLSAFKSIL 406
Q++ S LSAF S++
Sbjct: 760 QQK----SVGSLSAFNSLI 774
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ VIKA C++G + K +V+ EM+K KP++ TY I + + +
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVK 299
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM+ KG P+ T+ + + ++RS +A + M G+ P+ TY +I GF +
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+++ A ++ M+ R L N Y MI + + G+ A + + + P T
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTY 419
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++G K++ KA ++A ++ R
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKAR 445
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +++ FC+ +A L+ M G+ P+ TYT LI F K+ E +
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G N+ T+N I + +A L M GIEPD TYNL+I G+ +S
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKS 429
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSV 361
+ A ++ + M R+L P+ Y +I LC D A + D M +N V P+V
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL-DQMIRNGVKPNV 486
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I F + G +++A + EM G+K +V+TY +I K L+N
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+N+ I + +A +L+ M+ + P TY+++I G C S
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A +V M+ + PN +Y T+I QE + +A + K + +P + +
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
L+ GL + + +A ++ + + +++ AF ++ SKS
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F++N I C+ G +D+A V M + G+ PD TYT L+ F K R + ++
Sbjct: 275 NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G PN T+ I + + +A ++ M G++ + VTYN +I G ++
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A +++ ML + P+ Y +I + D A + + + PS T
Sbjct: 395 GEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL ++ KAN ++
Sbjct: 455 SVLISGLCHSSDLQKANEVL 474
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC----KGCFP 254
MG+ K Y MVE + + PDV TYT +I A K +G+ + MV K C P
Sbjct: 223 MGLFWKVYGSMVEAK---IVPDVYTYTNVIKAHCK-----VGDVIKGKMVLSEMEKECKP 274
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
NL T+N I L +A ++ LM G+ PD TY L++ GFC+ AK ++
Sbjct: 275 NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+M L PNR Y +I +EG+ A + + + + +V T +A++ G+ K
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 375 NQPCKANTI 383
+ KA ++
Sbjct: 395 GEMAKAMSL 403
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 137/335 (40%), Gaps = 40/335 (11%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG-RRE 115
E D EK QL+ HN I N + ++ + + E + + +G +
Sbjct: 674 EGDIEKASQLYDEMLHNGIN-PNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732
Query: 116 GFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
G+I I++ GK G ++ A+ F++ +++V SL+A
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQ----QKSVGSLSA------------------- 769
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
FN +I +FC+ G + +A + +M + P+++TYT LI A+ K
Sbjct: 770 --------------FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 815
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
E L+ M + PN T+ + ++ L M+ GI D + Y
Sbjct: 816 EMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAY 875
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
++ +C+ G A K+ + L + ++ +I +LC+E + + + K
Sbjct: 876 GVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGK 935
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ S T + LL G K+ +A+ ++ ++QR
Sbjct: 936 EELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 970
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 39/251 (15%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDI 186
G A+ TF M G +++ +A + L+++ K A+ FL + K + D+
Sbjct: 604 VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL--KTGVVPDV 661
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS--AFYKDNRPEIGNGLW 244
F +N +I FC+ G ++KA + EM G+ P+++ Y TLI+ + K L+
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721
Query: 245 NLMVCKGCFPN----------------------------------LATFNVRIQHLVNKR 270
+ M+ KG P+ L+ FN I
Sbjct: 722 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHG 781
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A +L M + P+ VTY ++I + ++ ++ A++++ M R ++PN Y
Sbjct: 782 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 841
Query: 331 TMIHYLCQEGD 341
+++ Q G+
Sbjct: 842 SLLLSYNQIGN 852
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G FP L N ++ L+ K+ G M I PD TY VIK C+ G +
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
K V S M + PN Y I LCQ G + A + K M+K P T + L
Sbjct: 259 IKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317
Query: 368 LEGLKKNNQPCKANTI 383
++G K + +A I
Sbjct: 318 VDGFCKQKRSKEAKLI 333
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F ++ YG+AG+ K ++ F +M L G V + N+ L VL + + E+
Sbjct: 157 FFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEM 216
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ + ++ D +++NI+I+ FC+ ++D+ + EM PDV+TY TL+ + +
Sbjct: 217 LKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK 276
Query: 237 PEIGNGLWNLMV--CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ + L N M CK P++ T+ I+ K+ +A ++ M G++P+ VTY
Sbjct: 277 IKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTY 336
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAY 346
N +IKG C + D K++ M G +P+ + T+I+ C G+ + A+
Sbjct: 337 NTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAF 389
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 13/277 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + + A+D +M+ G K + + N +K L E++ ++ L ++
Sbjct: 308 YCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIP 367
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +FN +I + C G LD+A+ V M+KL V D +Y+ LI + L+
Sbjct: 368 DACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLF 427
Query: 245 N-------LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ L+ G P A++ Q+L ++ +A +++ + + G + D ++Y +V
Sbjct: 428 DELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIV 486
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C+ G + + ML R +P+ IY +I ++ LA + +K ++
Sbjct: 487 ILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSY 546
Query: 358 VPSVDTISALLEGLKKNNQPC---KANTIMALVQRRV 391
P T ++L L + Q C A I+ +++R +
Sbjct: 547 KPQTSTWHSILNRLLE--QGCVHESAGVIVMMLERNI 581
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 16/318 (5%)
Query: 78 ENKYAFEDTVSRLAGARRFDYI-------------EHLLEHQKSLPQGRREGFIMRIMML 124
E K FE S RF Y E L + + +G + + M+
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 125 YG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI 182
G KAG + AM F +M + G + + N + +S D+ L E+ + +
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR-KL 447
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
F+++++I C L KA V+ +M + GVKP+V Y TLI A+ +++R E+
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L +M+ G P+L +N I L ++ +A L+ M GI+P+ TY I +
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+SG + +A++ + ML ++PN IY +I C G+ A K ++K +P +
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627
Query: 363 TISALLEGLKKNNQPCKA 380
SA++ L KN + +A
Sbjct: 628 AYSAIIHSLSKNGKTKEA 645
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +++ +I + + G +A V ++ K GV PDV Y +LIS F K+ E + L+
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G PN+ +N I L +A +L ++ + PD VTY+ +I G+C+S
Sbjct: 685 DEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKS 744
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A K++ M+ + + P+ IY +I +EG+ A + ++ +K+ V S+
Sbjct: 745 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAF 803
Query: 365 SALLEGLKKNNQPCKA 380
++L++ K+ + +A
Sbjct: 804 NSLIDSFCKHGKVIEA 819
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F +N +I C +++A +++V+M + G+KP+ TY I+ + K ++ +
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579
Query: 245 NLMVCKGCFPN--------------------LATFNVRIQH-LVNKRRSWQA-------- 275
M+ G PN L+TF ++ L+ R++ A
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639
Query: 276 ---NKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ MG+ +F G+ PD YN +I GFC+ G ++ A ++Y ML + PN +Y
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
T+I+ LC+ G+ A + + +K+ VP V T S +++G K+ +A
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 131/280 (46%), Gaps = 5/280 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A DM G K + A + + ++S +++ + + ++ + ++
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ I+IK C++G +A M + G+ PD+ Y+ +I + K+ + + G++
Sbjct: 593 I-YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G P++ +N I + +A++L M GI P+ V YN +I G C+ G
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE 711
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A++++ + + L+P+ Y T+I C+ G+ A+ + + + K P
Sbjct: 712 VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 771
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
L++G K KA ++ Q++ S LSAF S++
Sbjct: 772 LIDGCGKEGNLEKALSLFHEAQQK----SVGSLSAFNSLI 807
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ VIKA C++G + K +V+ EM+K KP++ TY I + + +
Sbjct: 241 DVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVK 299
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM+ KG P+ T+ + + ++RS +A + M G+ P+ TY +I GF +
Sbjct: 300 KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 359
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+++ A ++ M+ R L N Y MI + + G+ A + + + P T
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTY 419
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++G K++ KA ++A ++ R
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKAR 445
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +++ FC+ +A L+ M G+ P+ TYT LI F K+ E +
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G N+ T+N I + +A L M G+EPD TYNL+I G+ +S
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKS 429
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSV 361
+ A ++ + M R+L P+ Y +I LC D A + D M +N V P+V
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL-DQMIRNGVKPNV 486
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F++N I C+ G +D+A V M + G+ PD TYT L+ F K R + ++
Sbjct: 275 NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G PN T+ I + + +A ++ M G++ + VTYN +I G ++
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A +++ ML L P+ Y +I + D A + + + PS T
Sbjct: 395 GEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL ++ KAN ++
Sbjct: 455 SVLISGLCHSSDLQKANEVL 474
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC----KGCFP 254
MG+ K Y MVE + + PDV TYT +I A K +G+ + MV K C P
Sbjct: 223 MGLFWKVYGSMVEAK---IVPDVYTYTNVIKAHCK-----VGDVIKGKMVLSEMEKECKP 274
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
NL T+N I L +A ++ LM G+ PD TY L++ GFC+ AK ++
Sbjct: 275 NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+M L PNR Y +I +EG+ A + + + + +V T +A++ G+ K
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 375 NQPCKANTI 383
+ KA ++
Sbjct: 395 GEMAKAMSL 403
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I F + G +++A + EM G+K +V+TY +I K L+N
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+N+ I + +A +L+ M+ + P TY+++I G C S
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A +V M+ + PN +Y T+I QE + +A + K + +P + +
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
L+ GL + + +A ++ + + +++ AF ++ SKS
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN +I +FC+ G + +A + +M + P+++TYT LI A+ K E L+ M
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 861
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ PN T+ + ++ L M+ GI D + Y ++ +C+ G
Sbjct: 862 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKS 921
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K+ + L + ++ +I +LC+E + + + K+ S T + L
Sbjct: 922 LEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTL 981
Query: 368 LEGLKKNNQPCKANTIMALVQR 389
L G K+ +A+ ++ ++QR
Sbjct: 982 LLGFYKSGNEDEASKVLGVMQR 1003
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G I+ A + +M G + N + L + ++ + E+ EK +
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP- 729
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I +C+ G L +A+ + EM G+ PD Y LI K+ E L+
Sbjct: 730 DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ K +L+ FN I + +A +L M + P+ VTY ++I + ++
Sbjct: 790 HEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 848
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
++ A++++ M R ++PN Y +++ Q G+
Sbjct: 849 EMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G FP L N ++ L+ K+ G M I PD TY VIK C+ G +
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
K V S M + PN Y I LCQ G + A + K M+K P T + L
Sbjct: 259 IKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317
Query: 368 LEGLKKNNQPCKANTI 383
++G K + +A I
Sbjct: 318 VDGFCKQKRSKEAKLI 333
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 115 EGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+G+I I++ GK G ++ A+ F++ +++V SL+A ++ D +
Sbjct: 765 DGYIYCILIDGCGKEGNLEKALSLFHEAQ----QKSVGSLSAFNSLI----DSFCKHGKV 816
Query: 174 MEVPEKFHIQFD------IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+E E F D I ++ I+I A+ + ++++A + ++M+ + P+ +TYT+L
Sbjct: 817 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876
Query: 228 ISAFYKDNRPEIGN-----GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+ ++ +IGN L+ M +G + + V + +S +A KL+
Sbjct: 877 LLSY-----NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
GI+ ++ ++ +I C+ + ++ S M L + K T++ + G+
Sbjct: 932 LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 991
Query: 343 NLAYIMCKDSMKKNWVPS----VDTISALLEGLKKN 374
+ A + + WVP+ D+IS + +K +
Sbjct: 992 DEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMKSD 1027
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++ +++ ++D F M L G + S N AL +L +S +L F E + QFD+
Sbjct: 50 QSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR--TQFDV 107
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+SF I IKAFCE G + K + ++ +M+ +GV P+V YT LI A ++ + +++
Sbjct: 108 YSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSR 167
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G N + + I K +L M+ G+ P+ TYN +I +CR G
Sbjct: 168 MDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGK 227
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L +A KV+ + R + N Y +I LC++G + A + + + + P+ T +
Sbjct: 228 LSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNM 287
Query: 367 LLEGLKKNNQPCKA 380
L++GL Q KA
Sbjct: 288 LMDGLCNTGQLDKA 301
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + A F ++ G + N + L + + L+E ++ HI
Sbjct: 222 YCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEG-LLERMKRAHINP 280
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+FN+++ C G LDKA + +++ +G+ P ++TY LIS F K + + L
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G P+ T+ + + V +A ++ LM+R G+ PD+ TY ++I G C
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A K+Y +M+ L PN IY TMI+ C+E + A ++ +K P+V +
Sbjct: 401 GNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASY 460
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ ++ L K+ + +A ++
Sbjct: 461 ISTIQILCKDGKSIEAKRLL 480
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++N +I +C G L A+ V E+ K GV + +TY LI + + GL
Sbjct: 211 NLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLL 270
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M P TFN+ + L N + +A + ++ G+ P VTYN++I GF +
Sbjct: 271 ERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKV 330
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ + ++ M R + P++ Y +++ + D AY M + VP T
Sbjct: 331 GNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTY 390
Query: 365 SALLEGL 371
L+ GL
Sbjct: 391 GVLIHGL 397
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + A+ + L G T+ + N + ++ + + + E+ ++ I
Sbjct: 295 TGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDR-GISPSKV 353
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLWNL 246
++ I++ F ++KAY + M+++G+ PD TY LI K N E + L+
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVE-ASKLYKS 412
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV PN +N I + S++A K + M + G+ P+ +Y I+ C+ G
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGK 472
Query: 307 LDMAKKVYSAMLGRRLMP 324
AK++ M L P
Sbjct: 473 SIEAKRLLKEMTEAGLKP 490
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 185 DIFSFNIVIKAFCEMGIL---DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D ++ ++I C G + K Y MVEM ++P+ + Y T+I+ + K+
Sbjct: 386 DQHTYGVLIHGLCIKGNMVEASKLYKSMVEMH---LQPNDVIYNTMINGYCKECNSYKAL 442
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
MV G PN+A++ IQ L +S +A +L+ M G++P E
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPE 492
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 150/310 (48%), Gaps = 9/310 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N+ + +S L R + L +++ + G + +L+G K G + A+
Sbjct: 84 NRITYNALLSGLCNGGRMSDAQAL--YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALK 141
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F G V + NA + ++ L Q L + + + D+ ++N ++
Sbjct: 142 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP-DVVTYNSLVNGL 200
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD-NRPEIGNGLWNLMVCKGCFPN 255
C+ G +D+A +++V+ G P+VITY+TLIS ++ R E L MV GC P+
Sbjct: 201 CKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPD 257
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ ++N I L ++ +A KL G + R G EP+ TYN++I G + ++ A +++S
Sbjct: 258 IVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
++ L P+ Y I LC+ G A +M KD +K VP V + +A++ GL K
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377
Query: 376 QPCKANTIMA 385
+ +A +++
Sbjct: 378 RVDEAEVLLS 387
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 4/248 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ A+ DM GC V S NA + L + + + + L + K +
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK-GCSPNA 398
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK---DNRPEIGNGL 243
SFN +I C G KA EM K GVKP V+TY L+ K + R + L
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 458
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ KG P++ T++ I L + A +L+G M+ G P+ TYN +I G C
Sbjct: 459 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 518
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+D A +++ AM+ + +P+ Y T+I LC++ + A + S++ VP+
Sbjct: 519 LDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGM 578
Query: 364 ISALLEGL 371
+L++GL
Sbjct: 579 YFSLIDGL 586
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 133/266 (50%), Gaps = 9/266 (3%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M L GCK + S NA + L + + +A++ F + + + + ++ ++NI+I +
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGY--EPEVPTYNILIDGLLKE 306
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+++A+ + + K G++PD ITYT I K R E + M KGC P++ +
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++R +A L+ M+ G P+ +++N +I G CR+G A + ML
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426
Query: 320 RRLMPNRKIYQTMIHYLC---QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
R + P Y ++ LC QEG A + ++K VP V T SAL++GL K +
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486
Query: 377 PCKANTIMALVQRR--VPH-FSSNQL 399
A ++ ++ + +P+ ++ N L
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSL 512
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +FNI I C + A V M+K G P+ ITY L+S R L+
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P++ T+N + + +A K+ + G PD VTYN +I GFC++
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A+++ M+ L+P+ Y ++++ LC+ G + A ++ D K + P+V T
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITY 225
Query: 365 SALLEGL 371
S L+ GL
Sbjct: 226 STLISGL 232
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 10/284 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKA--GMIKHAMDTFYDMHLYGCKRTVK 151
RR + LLE K + G + + +++G A + A+ F + G + V
Sbjct: 237 RRLESARQLLE--KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVP 294
Query: 152 SLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
+ N + +L E R +A + F V K ++ D ++ + I C+ G ++ A L++
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLV--KHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + G PDV+++ +I+ K+ R + L + M KGC PN +FN I
Sbjct: 353 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 412
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS---GHLDMAKKVYSAMLGRRLMPNRK 327
+ +A M + G++P VTYN+++ G C++ G + A ++ AM+ + +P+
Sbjct: 413 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 472
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y +I L + G + A + K +P+V T ++L+ GL
Sbjct: 473 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 516
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ I++++ + G ++KA+ + ++ G+ D+ T+ IS + +R ++
Sbjct: 15 DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVF 73
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G +PN T+N + L N R A L M + G PD VTYN ++ GFC+
Sbjct: 74 DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A K++ + R +P+ Y +I+ C+ + A + + + ++ VP V T
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193
Query: 365 SALLEGLKKNNQ 376
++L+ GL KN +
Sbjct: 194 NSLVNGLCKNGR 205
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 17/285 (5%)
Query: 41 LVDKPLEPPALVK-------LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGA 93
LV LEP A+ KA R + L L + + + + + ++ L
Sbjct: 319 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLML--KDMDEKGCVPDVVSHNAVINGLCKE 376
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
+R D E LL ++ +G I ++ G +AG K AM TF +M G K TV
Sbjct: 377 KRVDEAEVLLSGMEA--KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV 434
Query: 152 SLNAALKVLTESRD---LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ N + L ++R +K + EK + D+ +++ +I + G LD A +
Sbjct: 435 TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP-DVVTYSALIDGLGKAGKLDDARRL 493
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ M+ G P+V TY +LIS ++ + L+ MV KGC P+ T+ I L
Sbjct: 494 LGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCK 553
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+ +A L G+ P Y +I G C +D A K+
Sbjct: 554 QEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G IK A+ F M G V + +A + L ++ L + L + K I ++
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP-NV 506
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I C + +D+A + V M + G PD ITY T+ISA K + L++
Sbjct: 507 YTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDG 566
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+ G P + I L R +A KL+
Sbjct: 567 SLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + ++ F +M G V + + + ++ +L+ A + ++ E+ ++
Sbjct: 268 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER-GLRM 326
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +F +I FC+ G LD A L + EM+K G++P V+ Y LI+ + K R ++ L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K P++ T++ I A +L M + G+ PD +TY+ +I+G C
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L+ A +++ ML + P+ Y T+I C+EG+ A + + ++K +P V T
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K+ + +A+ ++
Sbjct: 507 SVLINGLSKSARTKEAHRLL 526
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 122/226 (53%), Gaps = 3/226 (1%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V + NA L L+++ L + + FL + + + +++++NI+++A C G L++A V
Sbjct: 117 SVPAYNAVLLALSDA-SLPSARRFLSSML-RHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLV 267
+ +M+ G P+ +TY TL++AF + + + +LM +G PNL TFN + L
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R A K+ M R G+ PD V+YN ++ G+C+ G L + V+S M R L+P+
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++IH C+ G+ A + ++ + T +AL++G K
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 44/330 (13%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
+ L ARRF + +L H + P ++R + G+ ++ A+ DM GC
Sbjct: 131 ASLPSARRF--LSSMLRHGVA-PNVYTYNILVRALCARGR---LEEAVGVVGDMRGAGCA 184
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ N + + +L + + + E+ + + ++ +FN ++ C+ G ++ A
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 244
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
V EM + G+ PDV++Y TL+S + K +++ M +G P++ TF I
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 304
Query: 268 NKRRSWQANKLM------GL-----------------------------MQRFGIEPDEV 292
QA L+ GL M++ GI+P V
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
YN +I G+C+ G +D+A+++ M +R+ P+ Y T+I C+ G+ + A+ + +
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424
Query: 353 MKKNWVPSVDTISALLEGL---KKNNQPCK 379
+KK +P T S+L+ GL K+ N C+
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CE L+ A + M +LGV+PD TYTTLI K+ E L
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ M+ KG P++ T++V I L R+ +A++L+ + PD + Y+ +
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGFC G + A KVY +ML R + +Y +IH C+ G+ A
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
K ++ + P+ + +L+ GL + +A+
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N V+ A + L A + M + GV P+V TY L+ A R E G+ M
Sbjct: 120 AYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGH 306
GC PN T+N + A +++ LM+ G +P+ VT+N ++ G C++G
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A+KV+ M+ L P+ Y T++ C+ G + + + + ++ VP V T ++
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+ K +A ++A ++ R
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRER 322
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 127/255 (49%), Gaps = 3/255 (1%)
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
E F++ +M Y +AG+ A+ F M Y CK + + + +L R Q F
Sbjct: 130 ETFLI-LMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFD 188
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+ +KF + D+ + +++ +C G + +A V EM+ G+KP+V TY+ +I + +
Sbjct: 189 SLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRC 246
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ + ++ M+ GC PN T+N ++ V R+ + ++ M+R G EPD VTY
Sbjct: 247 GQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTY 306
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N +I+ C+ +L+ A KV M + PN + T+ + + GD N A+ M K +
Sbjct: 307 NFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKE 366
Query: 355 KNWVPSVDTISALLE 369
N + T + L++
Sbjct: 367 LNCEANTVTYNTLMK 381
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 7/301 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
+K AF +S L RR + + SL I+ ++ G +AG I A
Sbjct: 163 DKIAFSILISILCRERRASQAQEFFD---SLKDKFEPDVIVYTNLVRGWCRAGNISEAER 219
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F +M + G K V + + + L + E+ + Q + ++N +++
Sbjct: 220 VFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDA-GCQPNSITYNSLMRIH 278
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G +K V +M++LG +PD +TY LI KD E + LM KGC PN
Sbjct: 279 VKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNA 338
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+TFN + A+++ M+ E + VTYN ++K F S DM K+ +
Sbjct: 339 STFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTE 398
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNN 375
M ++ PN Y+ +I C G +N AY ++ + + + PS+ +L+ L+K
Sbjct: 399 MDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAG 458
Query: 376 Q 376
Q
Sbjct: 459 Q 459
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG++ A+ +M GC V + N L L + R L + L E+ E+ +
Sbjct: 26 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER-GVPP 84
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F +I +C G LDKA + M ++PD++TY TLI + + N LW
Sbjct: 85 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 144
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M + FPN T+++ I K + A + M GI P+ +TYN +IKG+CRS
Sbjct: 145 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 204
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ +K M+ ++ P+ Y T+IH +E + A+ + K+ P V T
Sbjct: 205 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 264
Query: 365 SALLEGLKKNNQPCKANTI 383
+ L+ G + +A I
Sbjct: 265 NMLINGFSVHGNVQEAGWI 283
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F + D + +VI FC G++ A V EM G PDV+TY TL++ K+ R
Sbjct: 10 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 69
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
GL N M +G P+L TF I + + +A +L M + PD VTYN +I
Sbjct: 70 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 129
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G CR G LD A ++ M R + PN Y +I C++G A+ + + K +P
Sbjct: 130 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 189
Query: 360 SVDTISALLEGLKKNNQPCKA 380
++ T +++++G ++ K
Sbjct: 190 NIMTYNSIIKGYCRSGNVSKG 210
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
EM+ G+ PD + YT +I F + + + MV GC P++ T+N + L +R
Sbjct: 6 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R A L+ M+ G+ PD T+ +I G+C G LD A +++ ML +RL P+ Y
Sbjct: 66 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
T+I +C++GD + A + D + P+ T S L++
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 164
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 92/173 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I + CE G ++ A+ + EM G+ P+++TY ++I + + G M
Sbjct: 158 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 217
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ P+L T+N I + + + A KL+ +M++ ++PD VTYN++I GF G++
Sbjct: 218 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 277
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A ++ M + + P+R Y +MI+ G+ A+ + + +++ + P
Sbjct: 278 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR----DLKAIQAFLMEVPEKFHI 182
+ G + A D + DMH R + + +L +S ++ FL E+ K I
Sbjct: 133 RQGDLDKANDLWDDMH----SREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK-GI 187
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+I ++N +IK +C G + K + +M V PD+ITY TLI + K+++
Sbjct: 188 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 247
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L N+M + P++ T+N+ I +A + M GIEPD TY +I G
Sbjct: 248 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 307
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRK 327
+G+ A +++ ML R P+ K
Sbjct: 308 TAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+ FG+ PD V Y +VI GFCR+G + A +V M+G +P+ Y T+++ LC+E
Sbjct: 7 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEG 370
A + + ++ P + T + L+ G
Sbjct: 67 LLDAEGLLNEMRERGVPPDLCTFTTLIHG 95
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 2/326 (0%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKH 133
R ++ N + + +S L RR D L + +SL + + YGK G +
Sbjct: 396 RGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEK 455
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+DTF M G ++ + NA+L L E ++ + ++ + D ++N+++
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI-HNCGLSPDSVTYNMMM 514
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
K + + G +DKA ++ EM G +PD+I +LI YK R + ++ +
Sbjct: 515 KCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLA 574
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P + T+N+ I L + + +A L G M+ G P+ VT+N ++ C++ +D+A K+
Sbjct: 575 PTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKM 634
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M P+ Y T+I+ L +EG A+ MKK P T+ LL G+ K
Sbjct: 635 FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWF-YHQMKKFLSPDHVTLYTLLPGVVK 693
Query: 374 NNQPCKANTIMALVQRRVPHFSSNQL 399
+ + A I+ + +SNQ+
Sbjct: 694 DGRVEDAIKIVMEFVHQSGLQTSNQV 719
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M+ G+ MD +M G + + + ++VL + + L + ++
Sbjct: 233 LMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDE- 291
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D+ ++ ++I A C G LDKA + +M+ KPD++TY TL+S F E
Sbjct: 292 GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETV 351
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
W+ M G P++ T+ + ++ L + QA ++ +M+ GI P+ TYN +I G
Sbjct: 352 KRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISG 411
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
LD A ++++ M + P Y I Y + GD A + K+ +PS
Sbjct: 412 LLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471
Query: 361 VDTISALLEGLKK 373
+ +A L L +
Sbjct: 472 IAACNASLYSLAE 484
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
+ L A + D + L ++ + +M +G G ++ + +M G
Sbjct: 304 IDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGY 363
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
V + ++ L +S K QAF +++V I ++ ++N +I + LD+A
Sbjct: 364 APDVVTYTILVEALCKSG--KVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEA 421
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ M+ LGV P +Y I + K PE + M +G P++A N +
Sbjct: 422 LELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYS 481
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L R +A + + G+ PD VTYN+++K + ++G +D A K+ + ML P+
Sbjct: 482 LAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD 541
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ ++I L + G + A+ M P+V T + L+ GL K + KA
Sbjct: 542 IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKA 596
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + AM F +M Y CK N + ++ ++ I L + K I+ D+
Sbjct: 905 KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVN-IACDLFKRMIKEGIRPDL 963
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ I+++ G +D A E++ G+ PD ++Y +I+ K R E L++
Sbjct: 964 KSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSE 1023
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P L T+N I H N QA K+ +Q G+EP+ TYN +I+G +SG+
Sbjct: 1024 MKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGN 1083
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTM 332
D A V+ M+ PN + +
Sbjct: 1084 KDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 9/301 (2%)
Query: 90 LAGARRFDY--IEHLLEHQKSL---PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
+A RR D I LLE ++L P +R++ G+AG I A M
Sbjct: 235 VALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVL---GRAGRIDDAYGILKTMEDE 291
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC V + + L + L + ++ H + D+ ++ ++ F G L+
Sbjct: 292 GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH-KPDLVTYITLMSKFGNYGDLET 350
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
EM+ G PDV+TYT L+ A K + + + ++M +G PNL T+N I
Sbjct: 351 VKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLIS 410
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L+N RR +A +L M+ G+ P +Y L I + + G + A + M R +MP
Sbjct: 411 GLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMP 470
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ ++ L + G A + D P T + +++ K Q KA ++
Sbjct: 471 SIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLL 530
Query: 385 A 385
Sbjct: 531 T 531
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+N ++ I + A + VEM+ G P++ TY L+ A K R + L+N M
Sbjct: 790 SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+C+GC PN+ T N+ I LV +A L + P TY +I G ++G
Sbjct: 850 LCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRS 909
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A K++ M + PN IY +I+ + G+ N+A + K +K+ P + + + L
Sbjct: 910 EEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTIL 969
Query: 368 LEGL 371
+E L
Sbjct: 970 VECL 973
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+GK+ I + + +M GCK + + N + L +S + KA+ + + F
Sbjct: 833 HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPT 892
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ +I + G ++A + EM KP+ Y LI+ F K I L
Sbjct: 893 --PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDL 950
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ +G P+L ++ + ++ L R A ++ G++PD V+YNL+I G +
Sbjct: 951 FKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGK 1010
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
S L+ A ++S M R + P Y +I + G + A M ++ P+V T
Sbjct: 1011 SRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFT 1070
Query: 364 ISALLEGLKKNNQPCKANTI 383
+AL+ G K+ +A ++
Sbjct: 1071 YNALIRGHSKSGNKDRAFSV 1090
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFD 185
K+ I A+D +Y++ T + + +L R +A++ F E+P+ + + +
Sbjct: 870 KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIF-EEMPD-YQCKPN 927
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+NI+I F + G ++ A + M K G++PD+ +YT L+ + R + +
Sbjct: 928 CAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFE 987
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ G P+ ++N+ I L RR +A L M+ GI P+ TYN +I F +G
Sbjct: 988 ELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAG 1047
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A K++ + L PN Y +I + G+ + A+ + K M P+ T +
Sbjct: 1048 MVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFA 1107
Query: 366 AL 367
L
Sbjct: 1108 QL 1109
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +S+N +I + G +A V M G+KP + TY+ L+ A + L
Sbjct: 190 LNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDL 249
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G PN+ T+ + I+ L R A ++ M+ G PD VTY ++I C
Sbjct: 250 LEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCA 309
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G LD AK++Y+ M P+ Y T++ GD + + P V T
Sbjct: 310 AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVT 369
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR--VPHFSS 396
+ L+E L K+ + +A ++ +++ R VP+ +
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHT 404
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 103/206 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF++N+++ A + +D+ + + EM G KP++IT+ +ISA K N L+
Sbjct: 822 NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ P T+ I L+ RS +A K+ M + +P+ YN++I GF ++
Sbjct: 882 YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++++A ++ M+ + P+ K Y ++ L G + A ++ P +
Sbjct: 942 GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ ++ GL K+ + +A ++ + ++ R
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNR 1027
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 38/300 (12%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ YG+A + A F + + CKRTVKS+N+ L L ++R L+ + +++
Sbjct: 24 VIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISN-- 81
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT----------------- 223
+ D +FNI+I A C G LD + V EMQK GVKP+V+T
Sbjct: 82 YGSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEA 141
Query: 224 -------------------YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
YTTLI F L MV A ++ I
Sbjct: 142 LRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLIS 201
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L R + + ++ M G +PD VTYN +I G C+ L+ A +V M+ + P
Sbjct: 202 ALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKP 261
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + T+I +LC+EG + A + +D ++ P V + + +GL + Q +A +I+
Sbjct: 262 DVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSIL 321
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + F +M G K V + + L+ + LK ++ + + I+ +
Sbjct: 100 CGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNAS 159
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ +IK FC +G L+ A+ + EM VK Y+TLISA +K R E + + M
Sbjct: 160 IYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREM 219
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
GC P+ T+N I + A+++M M G +PD ++N +I C+ G L
Sbjct: 220 GENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKL 279
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A + M R P+ Y+ + LC+ A + + + K +VP ++I+ L
Sbjct: 280 DKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKL 339
Query: 368 LEGL 371
++ L
Sbjct: 340 VDRL 343
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I A + G ++ ++ EM + G KPD +TY +I+ K+N E + + + MV
Sbjct: 196 YSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMV 255
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC P++ +FN I L + + +A L+ M R G PD ++Y ++ G C L
Sbjct: 256 EKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLK 315
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M+ + +P + ++ LCQE + L + M +S+ + ++D + ++
Sbjct: 316 EATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLW-MILNSLGRGNRMNMDMWARVV 374
Query: 369 EGLKKNNQPCKANTIMALVQ 388
+ K N +N I +L+
Sbjct: 375 AFVYKENLSESSNLIDSLIS 394
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G++ A+ +M GC V + N L L + + L E+ E+ +
Sbjct: 439 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFP 497
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++F +I + + G ++KA + M + +KPDV+TY TLI F K + E N LW
Sbjct: 498 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 557
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ + +PN ++ + I N +A +L M G E +T N ++KG+CR+
Sbjct: 558 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 617
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ A + S ML + ++P+ Y T+I+ +E + + A+ + +P V T
Sbjct: 618 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 677
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ +L G + + +A IM +++R V
Sbjct: 678 NVILNGFSRQGRMQEAELIMLKMIERGV 705
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + + ++ G + V +LN + L +++ ++ ++FL ++ EK + D+
Sbjct: 231 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDV 289
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I A+C G+L++A+ +M M G+KP V TY +I+ K + G+ +
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ AT+N+ + A ++ M G+ PD V+++ +I ++G
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A K + M L P+ IY +I C+ G + A + + +++ V V T +
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 469
Query: 367 LLEGLKKNNQPCKANTIMALVQRR--VPHF 394
+L GL K +A+ + + R P F
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDF 499
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ I+I FC G++ +A V EM + G DV+TY T+++ K+ + L+ M
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G FP+ TF I +A L +M + ++PD VTYN +I GFC+ ++
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 551
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++++ M+ RR+ PN Y +I+ C G + A+ + + ++K + ++ T + ++
Sbjct: 552 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 611
Query: 369 EGLKKNNQPCKANTIMA--LVQRRVP 392
+G + KA+ ++ L++ VP
Sbjct: 612 KGYCRAGNAVKADEFLSNMLLKGIVP 637
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A+ F M K V + N + + +++ + ++ + I
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYP 567
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ S+ I+I +C MG + +A+ + EM + G + +IT T++ + + +
Sbjct: 568 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 627
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KG P+ T+N I + + +A L+ M+ G+ PD +TYN+++ GF R
Sbjct: 628 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 687
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G + A+ + M+ R + P+R Y ++I+ + + A+ + + +++ +VP
Sbjct: 688 GRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 8/282 (2%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
+ F + H+L + LP + I+R++ K+G+ + + + C
Sbjct: 133 QSFSAMIHILVRSRRLPDA--QAVILRMVR---KSGVSRVEIVESLVLTYGNCGSNPLVF 187
Query: 154 NAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
+ ++ ++R L+ +AF V + + I + N ++ ++G +D A+ + E+
Sbjct: 188 DLLVRTYVQARKLREGCEAF--RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 245
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ GV+ +V T +I+A K+ + E + M KG FP++ T+N I +
Sbjct: 246 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 305
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A +LM M G++P TYN +I G C++G AK V ML + P+ Y +
Sbjct: 306 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 365
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ C+ + A + + + VP + + SAL+ L KN
Sbjct: 366 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 407
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + N ++K +C G KA + M G+ PD ITY TLI+ F K+ + L N
Sbjct: 604 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 663
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T+NV + + R +A +M M G+ PD TY +I G
Sbjct: 664 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQN 723
Query: 306 HLDMAKKVYSAMLGRRLMPNRK 327
+L A +V+ ML R +P+ K
Sbjct: 724 NLKEAFRVHDEMLQRGFVPDDK 745
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 20/281 (7%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLM-----------EVPEKFHIQF-----DIFSFN 190
K +++S +A + +L SR L QA ++ E+ E + + + F+
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 188
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++++ + + L + ++ G+ + +L+ K ++ ++ +V
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N+ T N+ I L ++ + M+ G+ PD VTYN +I +CR G L+ A
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ +M G+ L P Y +I+ LC+ G + A + + +K P T + LL
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 371 LKKNNQPCKANTIMALV--QRRVPHFSSNQLSAFKSILSKS 409
+N+ A I + Q VP S SA +LSK+
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVS--FSALIGLLSKN 407
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G++ A+ +M GC V + N L L + + L E+ E+ +
Sbjct: 543 FCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFP 601
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++F +I + + G ++KA + M + +KPDV+TY TLI F K + E N LW
Sbjct: 602 DFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 661
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ + +PN ++ + I N +A +L M G E +T N ++KG+CR+
Sbjct: 662 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 721
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ A + S ML + ++P+ Y T+I+ +E + + A+ + +P V T
Sbjct: 722 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 781
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ +L G + + +A IM +++R V
Sbjct: 782 NVILNGFSRQGRMQEAELIMLKMIERGV 809
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + + ++ G + V +LN + L +++ ++ ++FL ++ EK + D+
Sbjct: 335 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDV 393
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I A+C G+L++A+ +M M G+KP V TY +I+ K + G+ +
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 453
Query: 247 MVCKGCFPNLATFNV------RIQHLVNKRRSWQA-------------NKLMGL------ 281
M+ G P+ AT+N+ R ++++ R + + L+GL
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513
Query: 282 ----------MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
M+ G+ PD V Y ++I GFCR+G + A KV ML + + Y T
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT 573
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+++ LC+E + A + + ++ P T + L+ G K+ KA T+ ++ +R
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ I+I FC G++ +A V EM + G DV+TY T+++ K+ + L+ M
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G FP+ TF I +A L +M + ++PD VTYN +I GFC+ ++
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 655
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++++ M+ RR+ PN Y +I+ C G + A+ + + ++K + ++ T + ++
Sbjct: 656 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 715
Query: 369 EGLKKNNQPCKANTIMA--LVQRRVP 392
+G + KA+ ++ L++ VP
Sbjct: 716 KGYCRAGNAVKADEFLSNMLLKGIVP 741
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A+ F M K V + N + + +++ + ++ + I
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYP 671
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ S+ I+I +C MG + +A+ + EM + G + +IT T++ + + +
Sbjct: 672 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 731
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KG P+ T+N I + + +A L+ M+ G+ PD +TYN+++ GF R
Sbjct: 732 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 791
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G + A+ + M+ R + P+R Y ++I+ + + A+ + + +++ +VP
Sbjct: 792 GRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 8/282 (2%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
+ F + H+L + LP + I+R++ K+G+ + + + C
Sbjct: 237 QSFSAMIHILVRSRRLPDA--QAVILRMVR---KSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 154 NAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
+ ++ ++R L+ +AF V + + I + N ++ ++G +D A+ + E+
Sbjct: 292 DLLVRTYVQARKLREGCEAF--RVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 349
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ GV+ +V T +I+A K+ + E + M KG FP++ T+N I +
Sbjct: 350 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 409
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A +LM M G++P TYN +I G C++G AK V ML + P+ Y +
Sbjct: 410 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 469
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ C+ + A + + + VP + + SAL+ L KN
Sbjct: 470 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 511
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + N ++K +C G KA + M G+ PD ITY TLI+ F K+ + L N
Sbjct: 708 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 767
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T+NV + + R +A +M M G+ PD TY +I G
Sbjct: 768 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQN 827
Query: 306 HLDMAKKVYSAMLGRRLMPNRK 327
+L A +V+ ML R +P+ K
Sbjct: 828 NLKEAFRVHDEMLQRGFVPDDK 849
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 20/281 (7%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLM-----------EVPEKFHIQF-----DIFSFN 190
K +++S +A + +L SR L QA ++ E+ E + + + F+
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 292
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++++ + + L + ++ G+ + +L+ K ++ ++ +V
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N+ T N+ I L ++ + M+ G+ PD VTYN +I +CR G L+ A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ +M G+ L P Y +I+ LC+ G + A + + +K P T + LL
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 371 LKKNNQPCKANTIMALV--QRRVPHFSSNQLSAFKSILSKS 409
+N+ A I + Q VP S SA +LSK+
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVS--FSALIGLLSKN 511
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 146/314 (46%), Gaps = 15/314 (4%)
Query: 76 VIENKYAFEDTVSRLAGARRFDY---IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM-- 130
++ N + ++ L RF I +E +L + I++ G GM
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK-----GLFGMDD 422
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ AM F M G TV + N + + L FL + E + + D ++
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKES-NCEPDERTYC 481
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC+ G LD A EM K G+ P+ TYT +I + K+ + ++ L+ M
Sbjct: 482 ELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN 541
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC ++ T+N I L R +A K M G++P+ +TY +I G C++ ++A
Sbjct: 542 GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLA 601
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K++ M + +PN Y ++I+ LCQEG + A + ++ + P++DT S L+ G
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCE----PTIDTYSTLVSG 657
Query: 371 LKKNNQPCKANTIM 384
L + + +A+ ++
Sbjct: 658 LCREGRSNEASQLV 671
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ GK M+ A + + + G K ++ + N + +L + ++ ++ + F
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQ-F 226
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D F++ +I C LDKA+ V M K G P+ +TY+TLI+ + R
Sbjct: 227 DLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEA 286
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M KG P + T+ V I L + R A L+ M + G P TY +I G
Sbjct: 287 MDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISG 346
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
R+G +++A +Y ML L+PN Y +I+ LC EG F +A
Sbjct: 347 LFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIA 391
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 3/258 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIF 187
G + A++ M GC +V++ A + L + ++ AI + + E + +
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG--LVPNTV 373
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C G A + M+ G + TY +I + + E ++N M
Sbjct: 374 TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G P + T+N I + + A + + +M+ EPDE TY +I GFC+ G L
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A + ML + PN+ Y MI C+EG ++A + + + S++T +A+
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553
Query: 368 LEGLKKNNQPCKANTIMA 385
+ GL K N+ +A A
Sbjct: 554 ISGLSKGNRFSEAEKFCA 571
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I A+ F M GC ++++ NA + L++ + F ++ E+ +Q
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ-GLQP 580
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++ +I C+ + A+ + EM+K P+ TYT+LI ++ + + L
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLT 640
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
GC P + T++ + L + RS +A++L+ M+ G+ P Y ++ C+S
Sbjct: 641 E----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKS 696
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++++ M + P+ IY+ +I LC A + + +KK W +
Sbjct: 697 LKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVW 756
Query: 365 SALLEGL 371
+ L++GL
Sbjct: 757 TVLVDGL 763
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + F M GC + + + L + L E+ EK I+ ++++
Sbjct: 248 LDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEK-GIEPTVYTYT 306
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+ I + C++G +D A ++ M K G P V TYT +IS ++ + E+ G+++ M+ +
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN T+N I L + R A K+ M+ G + TYN +IKG ++ A
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA 426
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
V++ ML P Y T+I + G N A + N P T L+ G
Sbjct: 427 MVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISG 486
Query: 371 LKKNNQ 376
K +
Sbjct: 487 FCKGGK 492
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 10/221 (4%)
Query: 157 LKVLTESRDLKAIQAFL--MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
+K +LK + FL + + F ++SFN ++ + ++ A V ++
Sbjct: 131 IKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFS 190
Query: 215 LGVKPDVITYTTLISAFYKDNRPE----IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
GVKP ++T+ T+I+ K + + + N ++ +C P+ T+ I R
Sbjct: 191 SGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLC----PDAFTYTSLILGHCRNR 246
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A ++ M + G P+ VTY+ +I G C G + A + M + + P Y
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
I LC G + A + + KK PSV T +A++ GL
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 102/261 (39%), Gaps = 9/261 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
+ +S L+ RF E K QG + I ++ G K A F+
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFC--AKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFH 606
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M C + + + L + + A + E I +++ ++ C
Sbjct: 607 EMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEP-----TIDTYSTLVSGLCRE 661
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G ++A ++ M++ G+ P + Y +L+ A K + + ++NLM KG P+L +
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIY 721
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
V I L R+ +A + + + D + + +++ G + G D+ K M
Sbjct: 722 KVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMES 781
Query: 320 RRLMPNRKIYQTMIHYLCQEG 340
R P+ Y + L + G
Sbjct: 782 RNCTPSLHTYIILARELSKVG 802
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 41/295 (13%)
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPE 178
++M+ Y +AG ++ AM + M GC + N A+ VL R KA++ E
Sbjct: 134 QLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALE--FAERMR 191
Query: 179 KFHIQFDIFSFNIVIKAFC-EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ ++ D++++N +IK C ++D ++ V +Q G PD I+Y T++S K+ R
Sbjct: 192 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQN-GCPPDKISYYTVMSFLCKEKRV 250
Query: 238 EIGNGLWNLMVCK-GCFPNLATFNVRIQHLV----------------NKR---------- 270
E GL M G FP+ T+NV I L KR
Sbjct: 251 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 310
Query: 271 ---------RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
R +A +++G M G +PD VTY+ V+ GFCR G LD A+K+ M
Sbjct: 311 IVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKND 370
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
PN + +++ LC+ G + A+ + S ++ W PS T S ++ G ++ +
Sbjct: 371 CKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGK 425
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
FL E E + D ++ ++ +FC G + +A ++ EM G +PDV+TY+T++ F
Sbjct: 292 FLRE-SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 350
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + + M C PN T + L ++ +A +L+ + P +
Sbjct: 351 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 410
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+TY++V+ GF R G L + V ML + P +IH LC++G A +
Sbjct: 411 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQ 470
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K +V + ++ G + A ++M
Sbjct: 471 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLM 503
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ M GC S + L + + ++ ++ L + + D ++N++I
Sbjct: 218 AMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLI 277
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ G D+A + E + + D + Y+ ++ +F + R + M+ KGC
Sbjct: 278 HGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQ 337
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ T++ + QA K+M M + +P+ VT+ ++ G C+ G A ++
Sbjct: 338 PDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWEL 397
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ P+ Y ++H +EG + + ++K + P+ I+ L+ L K
Sbjct: 398 LNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCK 457
Query: 374 NNQPCKANTIMALVQRR 390
+ +P +A M Q +
Sbjct: 458 DGKPAEAKDFMEQCQSK 474
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 42/235 (17%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLG-------------------------------- 216
F ++ ++ G L A V+ MQK G
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 191
Query: 217 ---VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
V+PDV TY LI R + +M+ GC P+ ++ + L ++R
Sbjct: 192 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR-- 249
Query: 274 QANKLMGLMQRF----GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++ GL+QR G+ PD+VTYN++I G + GH D A + G+R + Y
Sbjct: 250 -VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGY 308
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
++H C G A + + + K P V T S +++G + + +A +M
Sbjct: 309 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMM 363
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G + A M+ CK + A L L + L + E++
Sbjct: 350 FCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPS 409
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++++V+ F G L ++ V+V+M + G P + LI A KD +P
Sbjct: 410 DI-TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFM 468
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
KGC N+ F I + A LM M PD VTY +V+ +
Sbjct: 469 EQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKK 528
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G L A + ML R L+P Y+T+IH C++G
Sbjct: 529 GRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKG 564
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N++I A C+ G +A M + Q G +V+ +TT+I F + E L + M
Sbjct: 448 INLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMY 507
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P++ T+ V + L K R +A L+ M G+ P VTY VI +C G+L+
Sbjct: 508 LSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLE 567
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ ML R+ M + Y ++ LC G N AY + ++ V T L+
Sbjct: 568 DLLNLLEKMLARQEM--KSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILM 625
Query: 369 E-------GLKKNNQPCK 379
E GL+ N C+
Sbjct: 626 ESFLNRGLGLQAYNVACR 643
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+FNIVI C+ G L +A + V M+ +G PDV+TY +LI + K E L
Sbjct: 198 NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLV 257
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSW--QANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ M GC ++ T+N I + W +A G M+R G+ + VT + + FC
Sbjct: 258 SEMRKSGCAADVVTYNALINCF--SKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A K+++ M R +MPN Y +++ C+ G + A ++ + + + VP+V
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375
Query: 363 TISALLEGLKKNNQPCKANTIMALVQR 389
T + +++GL K + A+ +++L++R
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMER 402
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 5/246 (2%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
RLA R+ + L EH LP F + I L K G + A F M GC
Sbjct: 177 RLARNRQGGLVRRLFEH---LPAPNVFTFNIVIDFLC-KQGELVEARALFVRMKAMGCSP 232
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
V + N+ + + +L+ ++ + E+ K D+ ++N +I F + G ++KAY
Sbjct: 233 DVVTYNSLIDGYGKCGELEEVELLVSEM-RKSGCAADVVTYNALINCFSKFGWIEKAYSY 291
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM++LGV +V+T +T + AF K+ L+ M +G PN T+ +
Sbjct: 292 FGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCK 351
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R A L+ M G+ P+ VTY +++ G C+ G + +A V S M + N +
Sbjct: 352 AGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELL 411
Query: 329 YQTMIH 334
Y T+IH
Sbjct: 412 YTTLIH 417
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 9/260 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G I+ A F +M G V +L+ + + ++ ++ + +
Sbjct: 279 FSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPN 338
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ F++ ++ C+ G LD A +++ EM G+ P+V+TYT ++ K+ + + + +
Sbjct: 339 E-FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVL 397
Query: 245 NLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+LM G N + I H +NK S +A L+ M+ G+E D Y +I G C+
Sbjct: 398 SLMERAGVKANELLYTTLIHGHFMNK-NSERALDLLNEMKNKGMELDVSLYGTLIWGLCK 456
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
LD AK + M L PN IY T++ + G + A + P+V T
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVT 516
Query: 364 ISALLEGLKKNNQPCKANTI 383
AL++GL CKA +I
Sbjct: 517 YCALIDGL------CKAGSI 530
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF 117
R+ KLF A R ++ N++ + V A R D LL+ + QG
Sbjct: 321 REAMKLF----AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM--VHQGLVPNV 374
Query: 118 IMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
+ +M+ G K G + A D M G K + +++ + L E
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ K ++ D+ + +I C++ LD+A ++ +M G++P+ + YTT++ AF+K
Sbjct: 435 MKNK-GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAG 493
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ L + + G PN+ T+ I L ++A M+ G++P+ Y
Sbjct: 494 KESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYT 553
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
+I GFC+ G L A + + M+ + + ++ +Y ++I ++GD A+ +
Sbjct: 554 TLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A L ++P+ +Q ++ ++ +I C+ G + +A +M++LG+ P+V YTTLI
Sbjct: 500 ALLHKIPDS-GLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDG 558
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
F K L N MV KG + + I + + A L M G++ D
Sbjct: 559 FCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLD 618
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
Y I GFC + A+ V S M+G + P++ Y +I
Sbjct: 619 LYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 128/325 (39%), Gaps = 49/325 (15%)
Query: 95 RFDYIEHLLEHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKR 148
+F +IE + + +R G + ++ L + K G+++ AM F M + G
Sbjct: 281 KFGWIEKAYSY---FGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMP 337
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ + + ++ L L E+ + + ++ ++ +++ C+ G + A V
Sbjct: 338 NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP-NVVTYTVMVDGLCKEGKVAVADDV 396
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPE--------------------IGNGLWNLMV 248
+ M++ GVK + + YTTLI + + E G +W L
Sbjct: 397 LSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL-- 454
Query: 249 CK-----------------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
CK G PN + + + +A L+ + G++P+
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
VTY +I G C++G + A + M L PN ++Y T+I C+ G + A + +
Sbjct: 515 VTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNE 574
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
+ K ++L++G K
Sbjct: 575 MVDKGMSLDKVVYTSLIDGHMKQGD 599
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I FC++G L KA +M EM G+ D + YT+LI K + L M+
Sbjct: 552 YTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMI 611
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G +L + I N +A ++ M GI PD+ YN +I+ + + G+++
Sbjct: 612 ETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNME 671
Query: 309 MAKKVYSAM 317
A + + M
Sbjct: 672 EASSLQNEM 680
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + ++ F +M G V + + + ++ +L+ A + ++ E+ ++
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER-GLRM 184
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +F +I FC+ G LD A L + EM+K G++P V+ Y LI+ + K R ++ L
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K P++ T++ I A +L M + G+ PD +TY+ +I+G C
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L+ A +++ ML + P+ Y T+I C+EG+ A + + ++K +P V T
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K+ + +A+ ++
Sbjct: 365 SVLINGLSKSARTKEAHRLL 384
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++NI+++A C G L++A V+ +M+ G P+ +TY TL++AF + + +
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68
Query: 245 NLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+LM +G PNL TFN + L R A K+ M R G+ PD V+YN ++ G+C+
Sbjct: 69 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G L + V+S M R L+P+ + ++IH C+ G+ A + ++ + T
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188
Query: 364 ISALLEGLKK 373
+AL++G K
Sbjct: 189 FTALIDGFCK 198
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A+ DM GC + N + + +L + + + E+ + + ++ +
Sbjct: 24 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 83
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN ++ C+ G ++ A V EM + G+ PDV++Y TL+S + K +++ M
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLM------GL--------------------- 281
+G P++ TF I QA L+ GL
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 203
Query: 282 --------MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
M++ GI+P V YN +I G+C+ G +D+A+++ M +R+ P+ Y T+I
Sbjct: 204 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 263
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL---KKNNQPCK 379
C+ G+ + A+ + + +KK +P T S+L+ GL K+ N C+
Sbjct: 264 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CE L+ A + M +LGV+PD TYTTLI K+ E L
Sbjct: 290 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 349
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ M+ KG P++ T++V I L R+ +A++L+ + PD + Y+ +
Sbjct: 350 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 409
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGFC G + A KVY +ML R + +Y +IH C+ G+ A
Sbjct: 410 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469
Query: 350 KDSMKKNWVPSVDTISALLEGL 371
K ++ + P+ + +L+ GL
Sbjct: 470 KQMLRSGFSPNSTSTISLVRGL 491
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + GV P+V TY L+ A R E G+ M GC PN T+N +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 272 SWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
A +++ LM+ G +P+ VT+N ++ G C++G ++ A+KV+ M+ L P+ Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
T++ C+ G + + + + ++ VP V T ++L+ K +A ++A ++ R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI----QAFLMEV-PEKFHIQFD 185
I A F M GC V + +K L +S ++K + L + P + + +
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S++I+I C+ G D+A + EM+ LGV PDVI+YT+LI F + + + L+N
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 542
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G P++ TF+V I L + + +AN+L+ +M + G P+ VTY ++KG C +
Sbjct: 543 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK------KNWVP 359
+ A +++ M +P+ Y T++ LCQ G+ A + K + N+ P
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Query: 360 SVDTISALLEGLKKNNQ 376
V + S +++GL K+ +
Sbjct: 663 DVISYSIIIDGLCKHGR 679
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 140/325 (43%), Gaps = 45/325 (13%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHA-MDTFYDMHLYG--CKRTVKSLNAALKVLTESRDL 166
P G +M+ + GK + H + D YG CK T+ S + + L + R
Sbjct: 78 PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRRE 137
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ E+ + + D+ S+ +I FC G +KA + EM +G++ DV T +
Sbjct: 138 DEARELFKEMKAQGMMP-DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSM 196
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI K+ + N L +M+ +GC ++ T++ I+ L K R +A +L MQ+ G
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Query: 287 IEPDEVTYNLVIKGFCRSGHL--------------------------------------- 307
PD + Y ++KG C++G++
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316
Query: 308 --DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D A++++ M + +MP+ Y T+IH C G + A + + + P V T S
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
L++ L K + +AN ++ +V +R
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQR 401
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 13/317 (4%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
++ + L RR D L + K+ QG I +++G ++G + A F
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKA--QGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G + V + + + +L ++ K I+A L+EV + DI +++ +IK C
Sbjct: 181 EMLDVGIRSDVTTSSMLIDIL--CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG------C 252
+ +A + + MQKLG +PD I Y TL+ + L M+ C
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P L ++++ I L RR +A +L M+ GI PD ++Y +I GFC SG + AK
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ ML + P+ +I LC++G A + + +++ +P V T + L++GL
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418
Query: 373 KNNQPCKANTIMALVQR 389
++ KA + +Q+
Sbjct: 419 MKHRISKATQLFLKMQK 435
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 11/254 (4%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA---IQAFLMEVPEKFHIQF--D 185
I A F M GC+ + +K L ++ ++ + ++ ++ I+
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S++I+I C+ D+A + EM+ G+ PDVI+YTTLI F + E L+N
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T +V I L K + +ANKL+ ++ + G PD VT ++KG C
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK------NWVP 359
+ A +++ M MPN T++ LCQ G+ +A + K+ + N P
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481
Query: 360 SVDTISALLEGLKK 373
+ + S +++GL K
Sbjct: 482 NAISYSIIIDGLCK 495
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 140 DMHLYG--CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
D YG CK T+ S + + L + R + E+ + I D+ S+ +I FC
Sbjct: 290 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ-GIMPDVISYTTLIHGFC 348
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
G +KA + EM +G++PDV T + LI K + N L +++ +GC P++
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT------------------------ 293
T ++ L K R +A +L MQ+ G P+ VT
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468
Query: 294 -----------------YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
Y+++I G C+ G D A++++ M ++P+ Y ++IH
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C+ G + A + + + P V T S L++ L K + +AN ++ ++ +R
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 149/317 (47%), Gaps = 13/317 (4%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
++ + L RR D L + K+ QG I +++G +G + A F
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKA--QGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G + V + + + +L + K I+A L+EV + D+ + ++K C
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKG--KVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK------GC 252
+ KA + ++MQKLG P+V+T TL+ + +I L M+ C
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN ++++ I L R +A +L M+ G+ PD ++Y +I GFCRSG AK
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ M+ + P+ + +I LC+EG A + + +++ +P+ T + L++GL
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 373 KNNQPCKANTIMALVQR 389
N++ +A + +Q+
Sbjct: 600 MNDRISEATQLFMKMQK 616
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 164 RDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
++ K I+A L+EV + DI +++ +IK C + +A + + M+KLG +PD I
Sbjct: 22 KEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 81
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKG------CFPNLATFNVRIQHLVNKRRSWQAN 276
Y TL+ + + I L M+ C P L ++++ I L RR +A
Sbjct: 82 AYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEAR 141
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+L M+ G+ PD ++Y +I GFCRSG + AK +++ ML + + +I L
Sbjct: 142 ELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDIL 201
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
C+EG A + + +++ + + T S L++GL
Sbjct: 202 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ +I FC G A + EM +GV+PDV T++ LI K+ + N L
Sbjct: 517 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 576
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+M+ +GC PN T+ ++ L R +A +L MQ+ G PD VTY
Sbjct: 577 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 636
Query: 295 -------------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+++I G C+ G D A++++ M ++
Sbjct: 637 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 696
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
PN Y ++IH C+ G A + + + + + T S ++ G K Q KA
Sbjct: 697 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 13/276 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N ++ + L R D L + K+L G I +++G ++G K A
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKAL--GVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKA 195
F +M G + V + + + +L ++ K I+A L+EV + + ++ ++K
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDML--CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC-KGCF- 253
C + +A + ++MQKLG PDV+TY TL+ + + L M+ G +
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657
Query: 254 ----PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
P++ ++++ I L R +A +L M+ G+ P+ ++Y +I GFCRSG L+
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
AK +++ M+ + + N Y MIH C+EG + A
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M +G++PDV T LI F K+ + N L +MV +GC ++ T++ I+ L K R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPN 325
+A +L M++ G PD + Y ++KG C++G +++A ++ ML G + P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
Y +I LC++ + A + K+ + +P V + ++L+ G ++ + KA +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHI 182
++ K G + A + M GC + + + +K L + R +A Q F+ +K
Sbjct: 19 MFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFM--SMKKLGC 76
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEM----QKLGVK--PDVITYTTLISAFYKDNR 236
+ D ++ ++K C+ G ++ A + EM + G+K P +++Y+ +I KD R
Sbjct: 77 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRR 136
Query: 237 PEIGNGLWNLMVCKGCFPNLATF-----------------------------------NV 261
+ L+ M +G P++ ++ ++
Sbjct: 137 EDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSM 196
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L + + +AN+L+ +M + G D VTY+ +IKG C + A +++ +M
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN------WVPSVDTISALLEGLKKN 374
P+ Y T++ LCQ G+ N A + ++ + P++ + S +++GL K+
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 142/324 (43%), Gaps = 2/324 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
L+ + D + + L + + + +E+ + +L F + +L+ K
Sbjct: 79 LRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEI 138
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHL-YGCKRTVKSLNAALKVLTESRDLKAIQAF 172
R G + ++ Y K + A+ M +G K + N L VL + LK ++
Sbjct: 139 RRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIV 198
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ + I+ D+ +FNI+IKA C + A L+M EM G+ PD T+TTL+ F
Sbjct: 199 NSRMVSR-GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFI 257
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++ + MV GC + T NV + + R + + M G PD
Sbjct: 258 EEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRF 317
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
T+N ++ G CR GH+ A ++ ML P+ Y ++I LC+ G+ A +
Sbjct: 318 TFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM 377
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ +++ P+ T + L+ L K NQ
Sbjct: 378 ILRDFSPNTVTYNTLISTLCKENQ 401
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N++I + C G L++A ++ EM+ G +V+TY TLI F K+ R E ++
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF 514
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G N+ T+N I L RR +A +LM M G++PD+ TYN ++ FCR+
Sbjct: 515 DEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRA 574
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + M P+ Y T+I L + G LA + + K V + T
Sbjct: 575 GDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTY 634
Query: 365 SALLEGLKKNNQPCKA 380
+ +++ L + + +A
Sbjct: 635 NPVIKALFREKRTSEA 650
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM----MLYG--KAGMIK 132
+++ F V+ L R +++H LE + Q EGF I +++G K G ++
Sbjct: 315 DRFTFNSLVNGLC---RIGHVKHALEILDVMLQ---EGFDPDIFTYNSLIFGLCKLGEVE 368
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A++ M L + N + L + ++ L V I D+ +FN +
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDVCTFNSL 427
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C A + EM+ G PD TY LI + R E L M GC
Sbjct: 428 IQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
N+ T+N I +R +A ++ M+ GI + VTYN +I G C++ ++ A +
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ ML L P++ Y +++ Y C+ GD A + + P T L+ GL
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607
Query: 373 KNNQPCKANTIMALVQ 388
K + A+ ++ VQ
Sbjct: 608 KAGRVELASRLLRTVQ 623
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 1/322 (0%)
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
KL ++ + +R + + F + L A + ++E S E +
Sbjct: 193 KLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTL 252
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
M + + G + A+ M GC + ++N + + ++ + +F+ E+ +
Sbjct: 253 MQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNE-G 311
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D F+FN ++ C +G + A ++ M + G PD+ TY +LI K E
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAV 371
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ N M+ + PN T+N I L + + +A +L ++ GI PD T+N +I+G
Sbjct: 372 EILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 431
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C + + +A +++ M + P+ Y +I LC G A + K+ +V
Sbjct: 432 CLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNV 491
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + L++G KN + +A I
Sbjct: 492 VTYNTLIDGFCKNKRIEEAEEI 513
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 6/267 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ F +M GC + N + L L+ + L E+ E ++ ++N +I
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM-ESSGCSRNVVTYNTLI 498
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC+ +++A + EM+ G+ +V+TY TLI K+ R E L + M+ +G
Sbjct: 499 DGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + + +A ++ M G EPD VTY +I G ++G +++A ++
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + ++ + Y +I L +E + A + ++ M+K P T + GL
Sbjct: 619 LRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCS 678
Query: 374 NNQPCKANTIMALVQRR----VPHFSS 396
P + LV+ +P FSS
Sbjct: 679 GGGPI-GEAVDFLVEMTDKGFLPDFSS 704
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 115/213 (53%), Gaps = 1/213 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N +I + C++ ++++A+ + EM G+ PDV+TY LIS F + +
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+N M+ + PN+ TFN+ + +RR +A ++ +M + GI+PD TYN ++ +
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C ++ AK +++ + R + PN Y MIH C+ + A + K+ N +P V
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 362 DTISALLEGLKKNNQPCKA-NTIMALVQRRVPH 393
T ++L++GL K + A + + R VPH
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 1/244 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G +K A D F M V + N + + R LK + L + ++ I+ D+F
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQ-GIKPDVF 318
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ +C + ++KA + + + GV P++ +Y+ +I F K + + L+ M
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
C P++ T+N I L + A KL+ M G+ D++TYN ++ C++ +
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 438
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A + + M + P+ Y T++ LC+ G A I+ +D + K ++ V+ +A+
Sbjct: 439 DKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAM 498
Query: 368 LEGL 371
++G
Sbjct: 499 IQGF 502
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFD 185
K ++ A D + +M G V + NA + +K A F + E +I +
Sbjct: 224 KVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE--NINPN 281
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+++FNI++ FC+ L +A V+ M K G+KPDV TY +L+ + ++N
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +G PN+ ++++ I ++ +A L M I PD VTYN +I G C+ G
Sbjct: 342 TISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLG 401
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A K+ M R + ++ Y +++ LC+ + A + + P + T +
Sbjct: 402 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYT 461
Query: 366 ALLEGLKKNNQ 376
L++GL KN +
Sbjct: 462 TLVDGLCKNGR 472
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I S++I+I FC++ +D+A + EM + PDV+TY +LI K + L
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G + T+N + L + +A L+ M+ GI+PD TY ++ G C++
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ V+ +L + + + IY MI C G F+ + + + +P+ T
Sbjct: 471 GRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTY 530
Query: 365 SALLEGLKKNNQPCKANTIM 384
++ L ++ KA ++
Sbjct: 531 EIIICSLFDKDENDKAEKLL 550
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 9/206 (4%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+M++G K + AM+ F +MH V + N+ + L + + ++ +++ ++
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKI----SYALKLVDE 412
Query: 180 FH---IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
H + D ++N ++ A C+ +DKA ++ +M+ G++PD+ TYTTL+ K+ R
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E ++ ++ KG ++ + IQ + ++ L+ M+ G P+ VTY +
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRL 322
+I D A+K+ M+ R L
Sbjct: 533 IICSLFDKDENDKAEKLLREMITRGL 558
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ +I C++G A ++ + V+P+V+ Y T+I + K L++ M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V KG P++ T+N I + A L M I P+ T+N+++ GFC+ L
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
AK V + M+ + + P+ Y +++ C + N A + ++ P++ + S +
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358
Query: 368 LEGLKK 373
+ G K
Sbjct: 359 IHGFCK 364
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D+ +I+I F ++G ++ V+ ++ K+G +P+VIT TTLI +
Sbjct: 103 ITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL 162
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ +V G N ++ I L ++ A +L+ + ++P+ V YN +I
Sbjct: 163 QFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ ++ A +YS M+ + + P+ Y +I C G A + + +N P+V
Sbjct: 223 CKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNV 282
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
T + L++G K + +A ++A++ ++
Sbjct: 283 YTFNILVDGFCKERRLKEAKNVLAMMMKQ 311
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF F ++ + + + +M+ G+ D++ + LI+ F + + + +
Sbjct: 72 IFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLA 131
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ G PN+ T I+ L K + QA + + G ++V+Y +I G C+ G
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ + G+ + PN +Y T+I +C+ N A+ + + + K P V T +
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251
Query: 366 ALLEGL 371
AL+ G
Sbjct: 252 ALISGF 257
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ + +I+ FC G+ D++ ++ +M++ G P+ +TY +I + + + + L
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549
Query: 244 WNLMVCKGCF 253
M+ +G F
Sbjct: 550 LREMITRGLF 559
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 144 YGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
YG V S NA L V+ + +K + E+ E + +++++NI+I+ FC G L
Sbjct: 161 YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSPNVYTYNILIRGFCTAGNL 219
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+ EM++ G P+V+TY T+I A+ K + L LM KG PNL ++NV
Sbjct: 220 EMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + + + ++++ M + PD VT+N +I G+C G+ A +++ M+ L
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN Y T+I+ +C+ G+ N A + P+ T + L++G + +A
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 383 IM 384
IM
Sbjct: 400 IM 401
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I F + G L +AY +M EM + G P +ITY LI+ R E +GL M
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G P++ +++ I + +A +L M GI PD TY+ +I+G C+ L
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
++ ML L P+ Y ++I+ C EGD + A + + ++K + P + T + L
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559
Query: 368 LEGLKKNNQPCKANTIM--ALVQRRVPH 393
+ G K ++ +A ++ L + VP+
Sbjct: 560 INGFNKQSRTKEAKRLLLKLLYEESVPN 587
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A F +M G V + N ++ + +L+ F E+ E+ ++ ++N
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM-ERNGCLPNVVTYN 242
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A+C++ + +A+ ++ M G+ P++I+Y +I+ ++ + + + + M +
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
P+ TFN I N QA L M + G+ P+ VTY +I C++G+L+ A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M R L PN + Y T+I Q+G AY + K+ ++ + P++ T +AL+ G
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I A+C G LDKA + EM + G PD++TY LI+ F K +R + L
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ + PN T+N L++ + + + LM KGFC
Sbjct: 577 LKLLYEESVPNEITYNT----LIDNCNNLEFKSALALM----------------KGFCMK 616
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A +V +ML + N ++Y +IH + G+ AY + K+ + + P TI
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Query: 365 SALLEGLKKNNQPCKANTIM 384
AL + L + + N ++
Sbjct: 677 MALAKSLYHEGKEVELNQLL 696
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ NL G P + ++N + ++ ++S + A + M G+ P+ TYN++I+GF
Sbjct: 154 IVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF 213
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C +G+L+M + M +PN Y T+I C+ A+ + + K P++
Sbjct: 214 CTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + ++ GL + Q + + I+ + +R
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKR 302
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 17/347 (4%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
KL + KLF +A R ++ + AF + L+G+ + ++E K
Sbjct: 224 GFCKLGNTQAAYKLFSEMEA----REIVPDSIAFSALICGLSGSGK------VVEADKLF 273
Query: 110 PQGRREGF------IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+ ++GF ++ Y K G +K A M G V + A L +S
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+L L E+ K +Q +I ++N ++ C+ G + +A +M EM++ G+ PD IT
Sbjct: 334 GELDTANELLHEMCRK-GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
YTTL+ A+YK L M+ +G P + TFNV + L + +L+ M
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
GI P+ TYN ++K +C ++ ++ ++Y M + ++P+ Y +I C+ +
Sbjct: 453 EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMK 512
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
A+ + K+ ++K + + + +AL++G K + +A + ++R
Sbjct: 513 EAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 7/262 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I+ A M GC V S + +L+ + + E+ K ++ ++
Sbjct: 122 RLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK-GLKPNL 180
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++++ +I C+ G + + V+ EM K GV PD + YTTLI F K + L++
Sbjct: 181 YTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE 240
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + P+ F+ I L + +A+KL M + G EPDEVTY +I G+C+ G
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +++ M+ L PN Y + LC+ G+ + A + + +K ++ T +
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
++ GL CKA I+ V+
Sbjct: 361 IVNGL------CKAGNILQAVK 376
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG++ A F + YG + S N L L+ RD+
Sbjct: 51 EAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDM-------------------- 90
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+V+K F E +LGV + +Y L+++ ++ + + L
Sbjct: 91 --LGMVLKVFSEF-------------PQLGVCWNTESYNILMNSLFRLGKIREAHHLLMR 135
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGC P++ ++ I + + +L+ MQ G++P+ TY+ +I C+SG
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +KV M+ R + P+ IY T+I C+ G+ AY + + + VP SA
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255
Query: 367 LLEGLKKNNQPCKANTI 383
L+ GL + + +A+ +
Sbjct: 256 LICGLSGSGKVVEADKL 272
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I A+ +M G + + ++ ++ + L E+ ++ +Q +
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR-GLQPTV 425
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ C G L+ ++ M + G+ P+ TY +++ + N I ++
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRG 485
Query: 247 MVCKGCFPNLATFNVRIQHLV---NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M +G P+ T+N+ I+ N + +W +K M + +RF + +YN +IKGF +
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM-VEKRFNLTAS--SYNALIKGFFK 542
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
L A++++ M L+ + +IY + +EG+ +C ++++K
Sbjct: 543 RKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A+ F M YG + V + + L S + + L + ++ I+ D+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDV 247
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I AF + G A + EM ++ + P++ TYT+LI+ F + + ++ L
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGCFP++ + I ++ A K+ M + G+ + +TY +I+GF + G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW---VPSVDT 363
++A++V+S M+ R + PN + Y ++H LC G A ++ +D K+ P++ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+ LL GL N + KA + +++R
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
+ + G + + N + +S +FL ++ K + DI +F +I FC
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM-MKLGFEPDIVTFTSLINGFCLGN 156
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+++A ++ +M ++G+KPDV+ YTT+I + K+ L++ M G P++ +
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L N R A+ L+ M + I+PD +T+N +I F + G A+++Y+ M+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ PN Y ++I+ C EG + A M K P V ++L+ G K
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 21/240 (8%)
Query: 153 LNAALKVLT---ESRDLKAIQAF--LMEVPEKF-----------HIQF-----DIFSFNI 191
N AL + T ESR L +I F L+ V K H+Q D+++ N+
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ FC+ A + +M KLG +PD++T+T+LI+ F NR E + N MV G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P++ + I L A L M+ +GI PD V Y ++ G C SG A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M R++ P+ + +I +EG F A + + ++ + P++ T ++L+ G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ + +I + C+ G ++ A + +M+ G++PDV+ YT+L++ R +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M + P++ TFN I V + + A +L M R I P+ TY +I GF
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G +D A++++ M + P+ Y ++I+ C+ + A + + +K +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 362 DTISALLEGLKKNNQPCKANTIMA-LVQRRVP 392
T + L++G + +P A + + +V R VP
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
+LME F D+ ++ +I FC+ +D A + EM + G+ + ITYTTLI F
Sbjct: 306 YLMETKGCFP---DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIE 288
+ +P + +++ MV +G PN+ T+NV + L + +A + MQ+ G+
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF-NLAYI 347
P+ TYN+++ G C +G L+ A V+ M R + Y +I +C+ G N +
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 348 MC---KDSMKKNWVPSVDTISALL-EGLK 372
C +K N V IS L EGLK
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLK 511
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F ++ +M D + +Q +GV D+ T L++ F + ++P + +
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ TF I R +A ++ M GI+PD V Y +I C++G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H++ A ++ M + P+ +Y ++++ LC G + A + + K+ P V T +
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 366 ALLEGLKKNNQ 376
AL++ K +
Sbjct: 252 ALIDAFVKEGK 262
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
MVE + L P +I +T L++ K + ++ L + + G +L T N+ +
Sbjct: 63 MVESRPL---PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQ 119
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + A+ +G M + G EPD VT+ +I GFC ++ A + + M+ + P+ +
Sbjct: 120 SSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y T+I LC+ G N A + P V ++L+ GL + + A++++ +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 389 RR 390
+R
Sbjct: 240 KR 241
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 37/147 (25%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFL-MEVPEKFHI 182
+G+ G A + F M G +++ N L L + + KA+ F M+ E +
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--------------------------- 215
+I+++N+++ C G L+KA +V +M+K
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 216 --------GVKPDVITYTTLISAFYKD 234
GVKP+V+TYTT+IS +++
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFRE 508
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 36/296 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ M GC+ V + N+ + + S D L ++ E+ +++ D+F+
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFT 220
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVK------------------------------ 218
++ +I + C G +D A + EM+ G+K
Sbjct: 221 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 280
Query: 219 -----PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
P+VIT+ L+ F K+ + + N L+ M+ +G PN+ T+N + + R
Sbjct: 281 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 340
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+AN ++ LM R PD VT+ +IKG+C +D KV+ + R L+ N Y ++
Sbjct: 341 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
CQ G LA + ++ + +P V T LL+GL N + KA I +Q+
Sbjct: 401 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A+ F +M G K +V + N+ ++ L ++ L ++ + I ++
Sbjct: 230 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNV 288
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ F + G L +A + EM G+ P++ITY TL+ + NR N + +L
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C P++ TF I+ +R K+ + + G+ + VTY+++++GFC+SG
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A++++ M+ ++P+ Y ++ LC G A + +D K + +
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 367 LLEGLKKNNQ-----------PCKA 380
++EG+ K + PCK
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKG 493
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I +I++ NI+I FC AY V+ ++ KLG +PD T+ TLI + + +
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV GC P++ T+N + + + A L+ M+ ++ D TY+ +I
Sbjct: 169 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 228
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M + + + Y +++ LC+ G +N ++ KD + + VP+V
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + LL+ K + +AN +
Sbjct: 289 ITFNVLLDVFVKEGKLQEANEL 310
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 93/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +F +IK +C + +D V + K G+ + +TY+ L+ F + + ++ L+
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+ + + L + + +A ++ +Q+ ++ V Y +I+G C+
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A ++ ++ + + PN Y MI LC++G + A I+ + + P+ T
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536
Query: 365 SALL 368
+ L+
Sbjct: 537 NTLI 540
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ G L+KA + ++QK + ++ YTT+I K + E L+
Sbjct: 427 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 486
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ CKG PN+ T+ V I L K +AN L+ M+ G P++ TYN +I+ R
Sbjct: 487 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 546
Query: 305 GHLDMAKKVYSAM 317
G L + K+ M
Sbjct: 547 GDLTASAKLIEEM 559
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N L V + L+ E+ + I +I ++N ++ +C L +A ++
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 346
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M + PD++T+T+LI + R + G ++ + +G N T+++ +Q
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A +L M G+ PD +TY +++ G C +G L+ A +++ + ++ +Y
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 466
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I +C+ G A+ + K P+V T + ++ GL K +AN ++
Sbjct: 467 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G IK A + F +M +G V + L L ++ L KA++ F E +K +
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF--EDLQKSKMD 460
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I + +I+ C+ G ++ A+ + + GVKP+V+TYT +IS K N L
Sbjct: 461 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 520
Query: 244 WNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
M G PN T+N I+ HL + + A KL+ M+ G D + +VI
Sbjct: 521 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA-KLIEEMKSCGFSADASSIKMVI 575
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 7/214 (3%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD----KAYLVMVEMQKLGVKPDV 221
L I +F F I + N+ + GI+D A + EM + P +
Sbjct: 22 LCTISSFFSSCERDFS---SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSL 78
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ ++ SA + + + + G N+ T N+ I ++ A ++G
Sbjct: 79 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 138
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ + G EPD T+N +IKG G + A + M+ P+ Y ++++ +C+ GD
Sbjct: 139 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 198
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+LA + + ++N V T S +++ L ++
Sbjct: 199 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
EM + G+ P+ ITY++LI F K+NR + N + +LMV KG
Sbjct: 724 EMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 38 REPLVDKPLEP---PALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAG 92
R+P+V P P P V+ + ++ DP ++F + ++ + + +L
Sbjct: 37 RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGR 96
Query: 93 ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
R F+ I+ +L +S ++ +Y +A + + + TFY M + K
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFH-IQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
LN L VL R +AF + + H + + S+N++++AFC L AY + +
Sbjct: 157 LNRILDVLVSHRGYLQ-KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + V PDV +Y LI F + + L + M+ KG P+ ++ + L K +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A KL+ M+ G PD V YN +I GFCR A+KV ML PN Y+T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I LC +G F+ ++ + K + P + L++G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLM 282
+T LI + + PE + M+ P N + LV+ R Q A +L
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G+ P+ +YNL+++ FC + L +A +++ ML R ++P+ Y+ +I C++G
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
N A + D + K +VP + + LL L + Q
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 1/257 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
AGM++ AM F M GC + + L + A L + K + ++
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP-NVA 215
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+N +I +C G L+ A + MQ G P+V TYT LI F K + E L++ M
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G PN+ T+ IQ ++ A +L+ M+ G+ P+E T ++I C+ G +
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A++ +++ + + N+ IY +MI LC+ G F+ A+ + + + + +VP S+L
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSL 395
Query: 368 LEGLKKNNQPCKANTIM 384
++GL + N+ +A +++
Sbjct: 396 IDGLCRENKLLEAISLL 412
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
++ LN L L L +++ +P + ++ ++ +I A+C G L A +
Sbjct: 43 IRCLNTLLMALARHGMLSDMESLAARMPVR-----NLHTYTTLINAYCHAGDLPAAKRHL 97
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+ + G+ PD YT+ + + + L+ LM +GC T+ +Q L
Sbjct: 98 SSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGA 157
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A + M G PD Y++++ G C +G A + + +G+ +PN +Y
Sbjct: 158 GMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I C GD LA + K K +P+V T + L+ G K+ K M L R
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSG---KVERAMVLYSR 274
Query: 390 RV 391
+
Sbjct: 275 MI 276
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++HA + M G + + L + ++ Q FL + +K I+ +
Sbjct: 298 GHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQK-GIKVNQVI 356
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I A C+ G D A+ +M ++ G PD Y++LI ++N+ L N M+
Sbjct: 357 YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G N F + I + + RS + M G++PD VTY + I+ +C+ G ++
Sbjct: 417 ESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRME 476
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ + M+ + PN Y T+I G + A+ K+ + P+ ++ + LL
Sbjct: 477 DAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
Query: 369 EGLKKNNQ 376
L K N
Sbjct: 537 GLLLKKNS 544
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I FC+ G +++A ++ M + G+ P+V+TYTTLI + E L
Sbjct: 248 NVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL 307
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G PN T V I L R +A + +G + + GI+ ++V Y +I C+S
Sbjct: 308 HSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKS 367
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----NLAYIMCKDSMKKNWVP 359
G D A + ++ +P+ +Y ++I LC+E +L M + ++ N VP
Sbjct: 368 GKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 100/253 (39%), Gaps = 57/253 (22%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D+ ++ + I+++C+ G ++ A +M++M GV+P++ TY TLI + N +
Sbjct: 455 VKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYA--NLGLVSQ 512
Query: 242 GLWNL--MVCKGCFPNLATFNVRIQHLVNKR----------------------------- 270
+L M+ GC PN ++ V + L+ K
Sbjct: 513 AFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVI 572
Query: 271 ----------------------RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
R +A + MQ + P E Y +I+ R L
Sbjct: 573 KLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLK 632
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + +M+ R +P + Y+ +I LC+EG F+ A + D + K + L+
Sbjct: 633 EALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILI 692
Query: 369 EGL--KKNNQPCK 379
+GL K N C
Sbjct: 693 DGLLQKGNTADCS 705
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C L +A ++ +M + GV+ + + +T LI ++ R + +
Sbjct: 388 DAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMIS 447
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P++ T+ V I+ R A +M M G+ P+ TYN +IKG+
Sbjct: 448 DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANL 507
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G + A M+ PN + Y ++ L ++ ++
Sbjct: 508 GLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYH 546
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 100/281 (35%), Gaps = 36/281 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G ++ A+D F M GC V++ + +S ++ + E +
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA-GLAP 282
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I+ C G L+ A+ ++ M+ G+ P+ T LI A K R E
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+V KG N + I L + A+ LM + G PD Y+ +I G CR
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402
Query: 305 GHL-----------------------------------DMAKKVYSAMLGRRLMPNRKIY 329
L D K + M + P+ Y
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
I CQ+G A M + P++ T + L++G
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 85/224 (37%), Gaps = 17/224 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR----------------DLKA 168
Y G++ A + +M GCK +S L +L + D+K
Sbjct: 504 YANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKV 563
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ L EV K + ++ I+ ++ L++A +V MQ + P YT +I
Sbjct: 564 LEELLEEVI-KLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMI 622
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
Y+ + + MV + P L ++ I L + A + G +
Sbjct: 623 ECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYN 682
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
DE+ + ++I G + G+ ++ S M + P IY +
Sbjct: 683 RDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI----QAFLMEV-PEKFHIQFD 185
I A F M GC V + +K L +S ++K + L + P + + +
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S++I+I C+ G D+A + EM+ LGV PDVI+YT+LI F + + + L+N
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G P++ TF+V I L + + +AN+L+ +M + G P+ VTY ++KG C +
Sbjct: 699 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 758
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK------KNWVP 359
+ A +++ M +P+ Y T++ LCQ G+ A + K + N+ P
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Query: 360 SVDTISALLEGLKKNNQ 376
V + S +++GL K+ +
Sbjct: 819 DVISYSIIIDGLCKHGR 835
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 10/241 (4%)
Query: 140 DMHLYG--CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
D YG CK T+ S + + L + R + E+ + + D+ S+ +I FC
Sbjct: 153 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMP-DVISYTSLIHGFC 211
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
G +KA + EM +G++PDV T LI F K+ + N L +MV +GC ++
Sbjct: 212 HSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIV 271
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T++ I+ L K R +A +L M++ G PD + Y ++KG C++G +++A ++ M
Sbjct: 272 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331
Query: 318 LG-------RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
L + + P+ +I LC+EG A + + +++ + + T S L++G
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Query: 371 L 371
L
Sbjct: 392 L 392
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 149/317 (47%), Gaps = 13/317 (4%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
++ + L RR D L E K+ QG I +++G +G + A F
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKA--QGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G + V + + + +L + K I+A L+EV + D+ + ++K C
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKG--KVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK------GC 252
+ KA + ++MQKLG P+V+T TL+ + +I L M+ C
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN ++++ I L R +A +L M+ G+ PD ++Y +I GFCRSG AK
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ M+ + P+ + +I LC+EG A + + +++ +P+ T + L++GL
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755
Query: 373 KNNQPCKANTIMALVQR 389
N++ +A + +Q+
Sbjct: 756 MNDRISEATQLFMKMQK 772
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 17/339 (5%)
Query: 65 QLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL---PQGRREGFIMRI 121
+L + H R I + + + L R L K L P G +M+
Sbjct: 256 ELLEVMVH-RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314
Query: 122 MMLYGKAGMIKHA-MDTFYDMHLYG--CKR-TVKSLNAALKVLTESRDLKAIQA-FLMEV 176
+ GK + H + D YG C R V + + + +L ++ K I+A L+EV
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL--CKEGKVIEANELLEV 372
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ DI +++ +IK C + +A + + MQKLG +PD ITY TL+ +
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432
Query: 237 PEIGNGLWNLMVCKG------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
I L M+ C P L ++++ I L RR +A +L M+ GI PD
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
++Y +I GFC SG + AK +++ ML + P+ +I LC++G A + +
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+++ + V T + L++GL ++ KA + +Q+
Sbjct: 553 VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK 591
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 51/316 (16%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHI 182
++ K G + A + M GC + + + +K L + R +A Q F+ +K
Sbjct: 244 MFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFM--SMKKLGC 301
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEM----QKLGVK---PDVITYTTLISAFYKDN 235
+ D ++ ++K C+ G ++ A + EM + G+K PDV T + LI K+
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEG 361
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ N L +M+ +GC ++ T++ I+ L + R +A L MQ+ G PD +TY
Sbjct: 362 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 421
Query: 296 LVIKGFCRSGHLDMAKKVYSAML---GR-------------------------------- 320
++KG C++G++++A +++ ML GR
Sbjct: 422 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 481
Query: 321 ------RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+MP+ Y T+IH C G + A + + + P V T S L++ L K
Sbjct: 482 EEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541
Query: 375 NQPCKANTIMALVQRR 390
+ +AN ++ +V +R
Sbjct: 542 GKVIEANKLLEVVIQR 557
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 44/294 (14%)
Query: 140 DMHLYG--CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
D YG CK T+ S + + L + R + E+ + I D+ S+ +I FC
Sbjct: 446 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ-GIMPDVISYTTLIHGFC 504
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
G +KA + EM +G++PDV T + LI K + N L +++ +GC ++
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT------------------------ 293
T ++ L K R +A +L MQ+ G P+ VT
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624
Query: 294 -----------------YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
Y+++I G C+ G D A++++ M ++P+ Y ++IH
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C+ G + A + + + P V T S L++ L K + +AN ++ ++ +R
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 11/254 (4%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAF--LMEVPEKFHIQF--D 185
I A F M GC+ + +K L ++ ++ A+Q ++ ++ I+
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S++I+I C+ D+A + EM+ G+ PDVI+YTTLI F + E L+N
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T +V I L K + +ANKL+ ++ + G D VT ++KG C
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK------NWVP 359
+ A +++ M MPN T++ LCQ G+ +A + K+ + N P
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637
Query: 360 SVDTISALLEGLKK 373
+ + S +++GL K
Sbjct: 638 NAISYSIIIDGLCK 651
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ +I FC G A + EM +GV+PDV T++ LI K+ + N L
Sbjct: 673 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+M+ +GC PN T+ ++ L R +A +L MQ+ G PD VTY
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQT 792
Query: 295 -------------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+++I G C+ G D A++++ M ++
Sbjct: 793 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 852
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
PN Y ++IH C+ G A + + + + + T S ++ G K Q KA
Sbjct: 853 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT---------LISAFYKDN 235
D F+FNI+I C + +++ M + + G PD++TY+ LI K+
Sbjct: 9 DSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEG 68
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ N L +M+ +GC ++ T++ I+ L + R +A L MQ+ G PD +TY
Sbjct: 69 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 128
Query: 296 LVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
++KG C++G++++A +++ ML G + P Y +I LC++ + A +
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188
Query: 350 KDSMKKNWVPSVDTISALLEG 370
K+ + +P V + ++L+ G
Sbjct: 189 KEMKAQGMMPDVISYTSLIHG 209
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 13/276 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N ++ + L R D L + K+L G I +++G ++G K A
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKAL--GVIPDVISYTSLIHGFCRSGKWKDAKY 695
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKA 195
F +M G + V + + + +L ++ K I+A L+EV + + ++ ++K
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDML--CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC-KGCF- 253
C + +A + ++MQKLG PDV+TY TL+ + + L M+ G +
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Query: 254 ----PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
P++ ++++ I L R +A +L M+ G+ P+ ++Y +I GFCRSG L+
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
AK +++ M+ + + N Y MIH C+EG + A
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQR--------FGIEPDEVTYNLVIKGF 301
G FP+ TFN+ I L N +R + M G+M+R + I PD T +++I
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G + A ++ M+ R + + Y T+I LC E + A + K P
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 362 DTISALLEGL 371
T L++GL
Sbjct: 125 ITYGTLMKGL 134
>gi|357168491|ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 140/336 (41%), Gaps = 40/336 (11%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P ++K+ A RD + +F+ R ++ + + RLA ARRF +E LL
Sbjct: 36 LAPNEVLKIFANIRDASLITSVFRKACARRDYKPSEALYSLMIDRLACARRFGDVEELLV 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+ + F R++ +YG A + AM+ Y M Y C + K+ N L +L
Sbjct: 96 RARVEKFRFSDEFFYRLIKMYGNVANHPERAMEMLYAMPGYNCWPSTKTFNYVLHMLVCK 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + I P + D FNI+IK C+ G D+A ++ EM K P+V+T
Sbjct: 156 RQYEVIHEVYESAP-WLGVTLDTCCFNILIKGLCQFGKFDEAISLLHEMPKQECLPNVVT 214
Query: 224 YTT-----------------------------------LISAFYKDNRPEIGNGLWNLMV 248
Y+T LIS ++ + I ++ M
Sbjct: 215 YSTLMHFLCQHGRVDKAFELFERMRKEEIDADTVVYNILISGLCREGKVTIAFDMFKSMS 274
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+GC+PN T+ V + L+ R +A L+ +M G+ P +Y L+I G C L+
Sbjct: 275 SEGCYPNSGTYQVLLDSLLTSRNFTEAKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLE 334
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIH--YLCQEGDF 342
++ M+ + +P + ++ L GDF
Sbjct: 335 DGHLIFKQMVDQGFIPRMGTWTKLLTSMSLTYTGDF 370
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 37/202 (18%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N PE + M C+P+ TFN + LV KR+ +++ G+ D +
Sbjct: 121 NHPERAMEMLYAMPGYNCWPSTKTFNYVLHMLVCKRQYEVIHEVYESAPWLGVTLDTCCF 180
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ---------------- 338
N++IKG C+ G D A + M + +PN Y T++H+LCQ
Sbjct: 181 NILIKGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRK 240
Query: 339 -------------------EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL--KKNNQP 377
EG +A+ M K + P+ T LL+ L +N
Sbjct: 241 EEIDADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTSRNFTE 300
Query: 378 CKANTIMALVQRRVPHFSSNQL 399
K M + P FSS +L
Sbjct: 301 AKDLVCMMSAEGLRPSFSSYKL 322
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 16/283 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-- 184
K GMI A F M G + V + NA + D Q+ + E + F+I
Sbjct: 199 KEGMILEAQCVFETMIEKGVEPNVNTYNALM-------DGYCSQSQMDEAQKLFNIMVRK 251
Query: 185 ----DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ S+NI+IK C+ G +D+A ++ EM + PD +TY+TL+ F +D RP+
Sbjct: 252 GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L M G P+L T+++ + L + +A +L+ MQ IEP+ Y ++I+G
Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQG 371
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C G L+ A++++S + + + P+ Y MI L + G N A + +D +P+
Sbjct: 372 MCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPN 431
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFK 403
T + +++G +N A L++ V S S F+
Sbjct: 432 SCTYNVIIQGFLRNGDTSNAG---RLIEEMVGRGFSADSSTFQ 471
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A+ M GCK V + + L + + + FL E+ + I ++
Sbjct: 94 KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR-GISPNV 152
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ FC +G ++A + +M + V PD +T+ L+ K+ ++
Sbjct: 153 VTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFET 212
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG PN+ T+N + ++ + +A KL +M R G P +YN++IKG C+SG
Sbjct: 213 MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D AK + + M + L P+ Y T++ CQ+G A + ++ +P + T S
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+L+GL K +A ++ +Q
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQE 355
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 101/187 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +FNI++ + G++ +A V M + GV+P+V TY L+ + ++ + L+
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N+MV KGC P++ ++N+ I+ R +A L+ M + PD VTY+ ++KGFC+
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A+K+ M L+P+ Y ++ LC++G + A+ + K + P++
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365
Query: 365 SALLEGL 371
+ L++G+
Sbjct: 366 TILIQGM 372
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q + +F+ ++ + A + EM K+G +PDVITY+T+I+ K
Sbjct: 40 KLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTT 99
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L M KGC PN+ ++ I L + +A + + M GI P+ VTY+ ++
Sbjct: 100 MAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSIL 159
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GFC G + A ++ M+ R +MP+ + ++ L +EG A + + ++K
Sbjct: 160 HGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVE 219
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V+T +AL++G +Q +A + ++ R+
Sbjct: 220 PNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 2/205 (0%)
Query: 181 HIQFDIFSFNIVIKAFCEMGI--LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+I+ D+++ I+I FC A+ V+ M KLG++P+ +T++TL++ +
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L++ MV G P++ T++ I L + A +L+ M+ G +P+ V Y+ +I
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ + A + S M+ R + PN Y +++H C G N A + K +++N +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P T + L++GL K +A +
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCV 209
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E + + D+ +++IV+ C+ G LD+A+ ++ MQ+ ++P++ YT LI
Sbjct: 314 LLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMC 373
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ E L++ + KG P++ T+ V I L+ S +A +L M G P+
Sbjct: 374 NFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSC 433
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
TYN++I+GF R+G A ++ M+GR + +Q +
Sbjct: 434 TYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 36/190 (18%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
++PDV T T LI+ F C N F+ A
Sbjct: 6 IRPDVYTLTILINCF--------------------CHSNHDHFHF-------------AF 32
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
++G M + G++P+ VT++ ++ G + A K++ M+ P+ Y T+I+ L
Sbjct: 33 SVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGL 92
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
C+ G +A + K +K P+V S +++ L K+ +A M + V S
Sbjct: 93 CKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEA---MEFLSEMVNRGIS 149
Query: 397 NQLSAFKSIL 406
+ + SIL
Sbjct: 150 PNVVTYSSIL 159
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 147/356 (41%), Gaps = 49/356 (13%)
Query: 57 ERDPEKLFQLFK--ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
E E+ +L + AN H R N + + L A+ FD E + Q+ + G +
Sbjct: 182 ENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVF--QQMIDNGVK 239
Query: 115 EGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+++G G K + M G K + + L L ++ +
Sbjct: 240 PNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL 299
Query: 173 LME--VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
++E + HI FNI A+ + G++DKA + +M++ G+ P+V+ Y LI A
Sbjct: 300 MVENGLSPDHHI------FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 353
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFN------------------------------ 260
K R + +N M+ +G PN+ FN
Sbjct: 354 LCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 413
Query: 261 -----VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
I +L N R + +L+ LM+ G+ PD +Y +I G+C +G D A+KV+
Sbjct: 414 AVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFD 473
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
M+ L P Y T++H C + AY + ++ ++K P V T + +L GL
Sbjct: 474 GMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQ 183
Y K GMI AMD F M +G V + A + L + R A F + E +
Sbjct: 319 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG--VT 376
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+I FN ++ C + ++A ++ EM G+ P+ + + TLI R G L
Sbjct: 377 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 436
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+LM G P+ ++ I R+ +A K+ M G+ P EVTYN ++ G+C
Sbjct: 437 IDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 496
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ +D A ++ ML + + P Y T++H L Q F+ A + + + + T
Sbjct: 497 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 556
Query: 364 ISALLEGLKKNN 375
+ +L GL K+N
Sbjct: 557 YNIILNGLCKSN 568
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 16/252 (6%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+++ E ++ D FS+ +I +C G D+A V M +G+ P +TY TL+ +
Sbjct: 436 LIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 495
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+R + L+ M+ KG P + T+N + L +R +A +L M G + D
Sbjct: 496 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 555
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN+++ G C+S +D A K++ ++ + L N + MI L + G A +
Sbjct: 556 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 615
Query: 353 MKKNWVPSVDT----------------ISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
VP+V T +L ++KN + + ALV+R +
Sbjct: 616 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 675
Query: 397 NQLSAFKSILSK 408
++ A+ S L +
Sbjct: 676 SRAGAYLSKLDE 687
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 116/282 (41%), Gaps = 39/282 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G +KH+ TF + G + +N LK L + + + +A+ L +PE D
Sbjct: 110 RMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPE-LGCTPD 168
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEM---QKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
S++I++K FC ++A ++ M P+V+TYTT+I K + G
Sbjct: 169 TVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEG 228
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSW----------------------------- 273
++ M+ G PN T+N I ++ + W
Sbjct: 229 VFQQMIDNGVKPNNDTYNCLIHGYLSIGK-WKEVVQMLEKMSARGLKPDCYTYGSLLNYL 287
Query: 274 ----QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + + LM G+ PD +N+ + + G +D A +++ M L PN Y
Sbjct: 288 CALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 347
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I LC+ G + A + + + P++ ++L+ GL
Sbjct: 348 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE--------- 238
++N ++ +C +D AY + EM + GV P V+TY T++ ++ R
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545
Query: 239 --------------IGNGL------------WNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
I NGL + + KG N+ TF + I L+ R
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A L + G+ P+ VTY LV + G L+ ++SAM PN ++ +
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 665
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ L GD + A ++N+ T S L+
Sbjct: 666 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLI 701
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
MV + V P+ TY+ LI + R + + L++ G N N ++ L +
Sbjct: 86 MVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCD 145
Query: 269 KRRSWQA-NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---GRRLMP 324
+R +A + L+ M G PD V+Y++++KGFC + A ++ M GR P
Sbjct: 146 GKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPP 205
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
N Y T+I LC+ F+ A + + + P+ DT + L+ G
Sbjct: 206 NVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHG 251
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 3/207 (1%)
Query: 109 LPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
L +G G + +L+G + A + + +M G K + + N L L +S +
Sbjct: 511 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCV 570
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ K +Q +I +F I+I A + G + A + + G+ P+V+TY
Sbjct: 571 DEAFKMFQSLCSK-GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRL 629
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+ ++ E + L++ M G PN N ++ L+++ +A + +
Sbjct: 630 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 689
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+ T +L+I F + AK +
Sbjct: 690 FSVEASTTSLLISIFTSDEYQHHAKSL 716
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 162/378 (42%), Gaps = 74/378 (19%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
AF + LA R++ + +++ KS E F + IM Y +A ++ A+ TF M
Sbjct: 58 AFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFCI-IMRKYARAQKVEEAVYTFNIM 116
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--------------------- 180
Y + + N L L +S++++ Q + ++F
Sbjct: 117 DKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLP 176
Query: 181 ------------HIQFDIFSFNIVIKAFCEMGILDKA------------------YLVMV 210
+ DI ++ I++ C+ G +D+A Y V+V
Sbjct: 177 KAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLV 236
Query: 211 -----------------EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
EM+ G++PDV Y LI AF K NR + + N M CKG
Sbjct: 237 HTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVT 296
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN TFN+ + L+ + + +A ++ M + EPD TY ++IK FC L A KV
Sbjct: 297 PNSRTFNIILSSLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKV 355
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M +R MP+ +Q +I+ LC++GD A ++ ++ ++K PS T L + L K
Sbjct: 356 WKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIK 415
Query: 374 NNQPCKANTIMALVQRRV 391
+ ++ +Q+++
Sbjct: 416 EGR----EDVLKFLQKKI 429
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVM---VEMQKLGVKPDVITYTTLISAFYKDNRP 237
H + +F+ VI + ++ + Y +M V++ K +V T+ ++ + + +
Sbjct: 51 HYNHSVKAFHTVIDSLAKI----RQYQLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKV 106
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNL 296
E +N+M PNLA FN + L + +A ++ + RF PD TY++
Sbjct: 107 EEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRF--VPDSKTYSI 164
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+++G+ + +L A++++ M+ P+ Y M+ LC+ G + A
Sbjct: 165 LLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEA 213
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 130/283 (45%), Gaps = 2/283 (0%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
V L ++FD + L+ + + ++M A A+D F M +G
Sbjct: 167 VDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQFGV 226
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
R K++NA L L + + +K + E+ + + D SFN ++ +C+ +L++A
Sbjct: 227 VRDTKAMNALLDTLCKEKSVKRARGVFQEL--RGVVPPDESSFNTLVHGWCQARMLNEAR 284
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
M EM++ G P VITYT+LI A+ + + + N M KGC PN+ T+ + + L
Sbjct: 285 DTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHAL 344
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
R+ +A + ++R G PD YN +I R+G L+ A V+ M + P
Sbjct: 345 GKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTV 404
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
I+ TMI C A + +++ P + T + LL+
Sbjct: 405 AIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLK 447
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +A M+ A DT +M +G +V + + ++ +D + + A L E+ K +
Sbjct: 274 WCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSK-GCRP 332
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ IV+ A + G +A V ++++ G PD Y ++I + R E N ++
Sbjct: 333 NVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVF 392
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P +A FN I + ++ A K++ M+ +PD TY ++K C+
Sbjct: 393 DEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKR 452
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ + + M + + P+ Y ++ +LC+ G + + ++ + K ++P +T
Sbjct: 453 QWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETF 512
Query: 365 SALLEGLKKNN 375
++E L K N
Sbjct: 513 DLVMEKLDKGN 523
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+++ + D + ++ +M ++G + T T ++ NR +N M
Sbjct: 163 YNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMD 222
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ--RFGIEPDEVTYNLVIKGFCRSGH 306
G + N + L ++ + G+ Q R + PDE ++N ++ G+C++
Sbjct: 223 QFGVVRDTKAMNALLDTLCKEK---SVKRARGVFQELRGVVPPDESSFNTLVHGWCQARM 279
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A+ M P+ Y ++I C E DF Y + + K P+V T +
Sbjct: 280 LNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTI 339
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
++ L K + +A + V+R
Sbjct: 340 VMHALGKAGRTQEALDVFDKVKR 362
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 3/174 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP-NLATFNVRIQHLVNK 269
+M + GV D L+ K+ + G++ + +G P + ++FN +
Sbjct: 220 KMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQEL--RGVVPPDESSFNTLVHGWCQA 277
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R +A M M+ G P +TY +I+ +C + + M + PN Y
Sbjct: 278 RMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITY 337
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++H L + G A + + VP ++++ L + + AN++
Sbjct: 338 TIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSV 391
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V + N+ + + +S D L ++ E+ +++ D+F+++ +I + C G +D
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDGCIDA 223
Query: 205 AYLVMVEMQKLGVK-----------------------------------PDVITYTTLIS 229
A + EM+ G+K P+VIT+ LI
Sbjct: 224 AISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K+ + + N L+ M+ KG PN T+N + + R +AN ++ LM R P
Sbjct: 284 VFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSP 343
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D VT+ +IKG+C+ +D K++ + R L+ N Y ++ CQ G +A +
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + +P V T LL+GL N + KA I +Q+
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A+ F +M G K ++ + N+ + L ++ L ++ + I ++
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR-KIIPNV 275
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN++I F + G L +A + EM G+ P+ ITY +L+ + NR N + +L
Sbjct: 276 ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDL 335
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C P++ TF I+ +R + KL + + G+ + VTY+++++GFC+SG
Sbjct: 336 MVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGK 395
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L++A++++ M+ ++P+ Y ++ LC G A + +D K + +
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455
Query: 367 LLEGLKKNNQ-----------PCKA 380
++EG+ K + PCK
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKG 480
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I +I++ NI+I FC AY V+ ++ KLG +PD T+ TLI+ +++
Sbjct: 96 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L MV GC PN+ T+N + + + A L+ M ++ D TY+ +I
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M + + + Y +++ LC+ G +N + KD + +P+V
Sbjct: 216 CRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNV 275
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + L++ K + +AN +
Sbjct: 276 ITFNVLIDVFVKEGKLQEANEL 297
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 89/164 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +F +IK +C++ +D+ + ++ K G+ + +TY+ L+ F + + EI L+
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+ + + L + + +A ++ +Q+ + D V Y ++I+G C+
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G ++ A ++ ++ + + PN Y MI LC++G + A I+
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 507
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + DM V + N + V + L+ E+ K I +
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK-GISPNT 310
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ +C L +A ++ M + PD++T+T+LI + K R + G L+
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK 370
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +G N T+++ +Q + A +L M G+ PD +TY +++ G C +G
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGK 430
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A +++ + ++ + +Y +I +C+ G A+ + K P+V T +
Sbjct: 431 LEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 490
Query: 367 LLEGLKKNNQPCKANTIM 384
++ GL K +AN ++
Sbjct: 491 MISGLCKKGSLSEANILL 508
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ G L+KA + ++QK + D++ YT +I K + E L+
Sbjct: 414 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLF 473
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ CKG PN+ T+ V I L K +AN L+ M+ G EP++ TYN +I+ R
Sbjct: 474 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRD 533
Query: 305 GHLDMAKKVYSAM 317
G L + K+ M
Sbjct: 534 GDLTASAKLIEEM 546
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+ GI + T N++I FCR A V ++ P+ + T+I+ LC E
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ A ++ ++ P+V T ++++ G+ K+
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGD 185
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 6/255 (2%)
Query: 127 KAGMIKHAMDTFY-DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
+AG A++ F +M G T+ + N + L +S DL A E+ E+ H D
Sbjct: 13 RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGH-HPD 71
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I + C+ G L++A + +M G P+V+TY+ LI+ K R + L
Sbjct: 72 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 131
Query: 246 LMVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLMGLMQ--RFGIEPDEVTYNLVIKGF 301
M K C PN+ T+N + L + + +A +LM ++ + PD VT++ +I G
Sbjct: 132 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 191
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G +D A V+ M+ +PN Y +++ LC+ A+ M + + K P V
Sbjct: 192 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 251
Query: 362 DTISALLEGLKKNNQ 376
T S L++ K ++
Sbjct: 252 ITYSVLVDAFCKASR 266
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTV-----KSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+ KA + A++ + M GC V + N + ++ + + A E+ K
Sbjct: 261 FCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++Q D+ +F +I C+ G ++ A ++ M LGV P+V+TY L+ K R E
Sbjct: 321 -NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 379
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
MV GC P+ T+ + L R+ A +L+ ++ FG +PD VTYN+++
Sbjct: 380 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 439
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G +SG + A V M+G+ P+ + L + G+ + + + K +P
Sbjct: 440 GLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLP 499
Query: 360 SVDTISALLE 369
T S++L+
Sbjct: 500 DATTCSSILD 509
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 131/269 (48%), Gaps = 8/269 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQFD 185
KAG ++ A DM GC V + + + L + + + + E+ K + +
Sbjct: 84 KAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 143
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQ--KLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I ++N + C+ + +A +M ++ L V PD +T++TLI K + + +
Sbjct: 144 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 203
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ G PN+ T+N + L + +A+ ++ M G+ PD +TY++++ FC+
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 263
Query: 304 SGHLDMAKKVYSAMLGRR-----LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+ +D A ++ M R L+P++ + +I C+ G+F A + ++ + KN
Sbjct: 264 ASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 323
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALV 387
P V T AL++GL K Q A I+ L+
Sbjct: 324 PDVMTFGALIDGLCKAGQVEAARDILDLM 352
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 41/247 (16%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVM-VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +NIV+++ C G +A + EM + GV P ++TY T+I+ K N G L+
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+V +G P++ T+N I L +A +L G M G P+ VTY+++I G C+
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 305 GHLDMAKKVYSAMLGR---------------------------------------RLMPN 325
G +D A+++ M + R+ P+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT-IM 384
+ T+I LC+ G + A + D + +VP+V T +AL+ GL K ++ +A+ I
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 385 ALVQRRV 391
++V + V
Sbjct: 241 SMVDKGV 247
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A F +M + V + A + L ++ ++A + L ++ + ++
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNLGVPPNV 361
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ C+ G +++A + EM G PD ITY +L+ A + +R + L +
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G P+ T+N+ + L ++ QA ++ M G +PD T+ G RSG+
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
L ++ +L + ++P+ +++ ++C+ G + M K+
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 6/250 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIF 187
G + A+ TF M G T+ S NA + L +R L A++ F + FH ++
Sbjct: 181 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP--NLV 238
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++++VI C+ LD+A ++ M G +PD++ YT L+ F R + GL M
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +GC P++ T+ V I L R A+++ + P+ VTY+ +I G+CR+ +
Sbjct: 299 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D KV M R PN Y TMI L AY M ++ + +VP T L
Sbjct: 359 DEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Query: 368 LEGLKKNNQP 377
L+ +QP
Sbjct: 416 KRALRMIDQP 425
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 127 KAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
K G + A D F M GC+ + NA + L + L A +A + E K D
Sbjct: 108 KLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEA-RKRDFAPD 166
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N ++ A ++G +D+A +M + G P ++++ +I+ + R ++N
Sbjct: 167 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 226
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ + PNL T++V I L + +A +L+ M G PD V Y ++ GF +G
Sbjct: 227 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 286
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A + M+ + +P+ Y +I LC+ G + A+ + ++ + P+V T S
Sbjct: 287 RLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYS 346
Query: 366 ALLEGLKKNNQPCKANTIM 384
AL+ G + ++ + +M
Sbjct: 347 ALIGGYCRASRVDEGGKVM 365
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA---YLV 208
+ N ++ + DL A + L E+ + +Q + + +I+++ C G + +A +
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVE-GMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLV 267
+E+ +PDV++YTTLI+ K R + L+ MV GC PN T+N + L
Sbjct: 86 SLELAH--AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ R A ++ ++ PD VTYN ++ + G +D A ++ M +P
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ +I LC+ A + + + +++ P++ T S +++GL K++Q +A ++
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260
>gi|414591622|tpg|DAA42193.1| TPA: hypothetical protein ZEAMMB73_663178 [Zea mays]
Length = 564
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 101 HLLEHQKSLPQGRREGFI-MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
L EH + LP R +RI+ LYGKAGM HA+ TF +M +YGC RT KSLNA +KV
Sbjct: 342 ELKEHVEYLPGARLAPIDGLRIIGLYGKAGMPGHALRTFQEMGMYGCPRTAKSLNATMKV 401
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L +R + E PEK+ ++ D S N V+K F +MG L AY VM M++ GV+P
Sbjct: 402 LLRARMFDEALSLFEEGPEKYDVEVDDISCNAVVKMFYDMGDLRAAYRVMQGMERAGVRP 461
Query: 220 DVIT 223
DVIT
Sbjct: 462 DVIT 465
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 126/232 (54%), Gaps = 8/232 (3%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C T+ +N K+ ++RD AIQ F +K + ++ +N VI C+ G++D+A
Sbjct: 177 CYGTI--INGLCKI-GKTRD--AIQMF--PKMKKIRVYPNLIMYNTVIDGLCKQGLVDEA 229
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQ 264
+ EM + G++ DV +Y ++I F R + L + MV +G +P++ TFN+ I
Sbjct: 230 CGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILID 289
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L R +A ++ +M + G +PD V+YN ++ G+C SG + AK+V+ M+ R +P
Sbjct: 290 GLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALP 349
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
N Y T+I+ C+ + A ++ + KN VP T + LL+GL K+ +
Sbjct: 350 NVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + M G K + S NA + S + + ++ E+ + ++
Sbjct: 293 KLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALP-NV 351
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ +I +C++ ++D+A +++ EM + PD +TY L+ K R L
Sbjct: 352 ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA 411
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G +L T+NV + + +A L + GI P+ TYN+++ G C+SG
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L AK+++ + + PN + Y MIH LC+EG + A + + N++P+ T
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531
Query: 367 LLEGL 371
++ +
Sbjct: 532 IVRAI 536
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G++ A +M G + V S N+ + +A L E+ + + D+
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++FNI+I C++G + +AY V+ M K G KPD+++Y L++ + +++
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV + PN+ ++ I R +A L+ M + PD VTYN ++ G +SG
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ AM + Y ++ + F+ A + + ++ P++ T +
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
LL+GL K+ + A I L+ +
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAK 485
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 1/239 (0%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N L L + + A+ + + K I+ + +F+I+I AF ++G + A+ ++ +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
K+G + DV TTL+ R L + V +G + + I L ++
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A ++ M++ + P+ + YN VI G C+ G +D A + + M+ + + Y +M
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
IH C G F A + + + + V P V T + L++GL K + +A ++A++ +R
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 5/246 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD----LKAIQAFLMEVPE-KFHIQFD 185
I A F M GC + +K L ++ + LK + L + + + +
Sbjct: 177 ISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPG 236
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +++I+I C++G D+A + EM+ G+ PDVI+Y+TLI F + + L++
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +G P++ TF+V I L + + +A KL+ +M + GI P+ +TYN +I GFC G
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVG 356
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A++++ +M + L P+ Y T+I+ C+ A + + ++ P+V T
Sbjct: 357 DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG 416
Query: 366 ALLEGL 371
LL+GL
Sbjct: 417 TLLKGL 422
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 5/299 (1%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLY 144
+ L R D + L E K+ QG I +++G AG + F +M
Sbjct: 244 IDGLCKVGREDEAKELFEEMKA--QGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + + + + L + + + L+EV + I ++ ++N +I FC +G L+
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKK-LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + + M G++PD I+YTTLI+ + K + + L+N M+ G PN+ T+ ++
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L K + A KL G+M+ +G+ + Y + + G C++ L A ++++ +
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
N + Y +I LC+ G A+ + + ++ P V T + ++ G K Q AN +
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANIL 539
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+ +I+ C + + +A M + + G P+V+TYTTLI ++R L+
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM----QRFGI--EPDEVTYNLVI 298
M GC PN T+ I+ L A KL M ++G+ +P +TY+++I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G D AK+++ M + ++P+ Y T+IH C G ++ + + + + +
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P + T S L++ L K + +A ++ ++QR +
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 150/344 (43%), Gaps = 12/344 (3%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
L K+ E + ++LF+ KA +I + ++ + A ++D +HL + +
Sbjct: 246 GLCKVGREDEAKELFEEMKAQG----MIPDVISYSTLIHGFCCAGKWDQSKHLFDEM--V 299
Query: 110 PQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
QG + + +++ K G + A M G + + N+ + DL
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ + + +P K ++ D S+ +I +C+ + +A + EM ++G P+V TY TL
Sbjct: 360 SARELFLSMPSK-GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ ++ + L+ +M G N + + + L ++A +L ++ +
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+ + Y+ +I G C++G L+ A +++ + L P+ Y MIH C+ G + A I
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
+ + + P + + LL G + N K ++ L+ + V
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGN---KLEEVIKLLHKMV 579
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 162 ESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
++ ++ AIQAF ++ + H I SFN ++ ++ + + + EM+ G+ PD
Sbjct: 66 KTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPD 125
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
+ T + L + NR ++ +G PN+ T+ I+ L + R +A +L
Sbjct: 126 LFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFL 185
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIYQTMIH 334
MQ+ G P+ VTY +IKG C++G++++A K++ ML G P Y +I
Sbjct: 186 RMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIID 245
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ G + A + ++ + +P V + S L+ G
Sbjct: 246 GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + ++ L+ K N L+N M G P+L T ++ L N R +A
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M + R G P+ VTY +IKG C + A +++ M PN Y T+I LCQ
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 339 EGDFNLAYIMCKDSMKK------NWVPSVDTISALLEGLKK 373
G+ N+A + K+ + N P V T S +++GL K
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCK 249
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K +K AM+ + +M G V + LK L + + + L V + + +
Sbjct: 387 YCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK-LFGVMKTYGVSA 445
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ + I + C+ L +A + E++ K ++ Y+ LI K + E L+
Sbjct: 446 NSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELF 505
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G P++ T+N+ I + AN L M+ G PD + YN ++ GFC
Sbjct: 506 EKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEG 565
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
L+ K+ M+ + + PN ++ LC++
Sbjct: 566 NKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 1/264 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y + G + A+ +M GC V + N L L + + L E+ E+
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D ++F +I C+ G + KA + M + +KPD++ Y TLI F K E
Sbjct: 359 ALP-DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ LW+ M+ + FPN T+ + I + +A +L +M GI+P VT N VIKG
Sbjct: 418 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+CRSG A + M+ + + P+ Y T+I+ +E + + A++ K+ +P
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
+ T + ++ G + + +A ++
Sbjct: 538 IITYNVVMNGFCRQGRMQEAELVL 561
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 4/270 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A + F +M G + S ++ + V + +R L + ++ +KF + D + ++
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM-KKFGLVPDNVIYTVL 299
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ +C G + +A + EM + G DVI Y T+++ K+ + L++ MV +G
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ TF I +A L G M + I+PD V YN +I GFC+ G ++ A +
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
++ M+ R++ PN Y +I+ C G + A+ + ++K P++ T + +++G
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479
Query: 373 KNNQPCKANTIMA-LVQRRVP--HFSSNQL 399
++ KA+ + ++ + V H S N L
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTL 509
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 3/252 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + V +LN + L + +++FL E+ E I D+ ++N +I A+C G+L++
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-EGNGIYADMVTYNTLIGAYCREGLLEE 171
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ +M M G+KP + TY +I+ K R G+ M+ G P+ T+N +
Sbjct: 172 AFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLV 231
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ +A ++ G M R G+ PD V+++ +I F R+ HLD A + M L+P
Sbjct: 232 ESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVP 291
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ IY ++H C+ G+ A + + +++ V V + +L GL K A+ +
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351
Query: 385 -ALVQR-RVPHF 394
+V+R +P F
Sbjct: 352 DEMVERGALPDF 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ I+I A+C +G + +A+ + M + G+KP ++T T+I + + + M
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ KG P+ ++N I V + +A + M++ G+ PD +TYN+V+ GFCR G +
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRM 554
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A+ V M+ + + P+R Y +I+ + + N A+ + +++ + P
Sbjct: 555 QEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 1/168 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A + M G K T+ + N +K S D FL + K +
Sbjct: 443 YCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK-GVAP 501
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+N +I F +DKA+L + +M+K G+ PD+ITY +++ F + R + +
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
M+ KG P+ +T+ I V + +A + M + G PD+V
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+ + + L + ++ G + +L+ K + E+ + +V
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G N+ T N+ + L + + M+ GI D VTYN +I +CR G L+
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ ++M + L P+ Y +I+ LC++G + A + + + P T + LL
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 369 EGLKKNNQPCKANTIMA--LVQRRVPHFSSNQLSAFKSILSKS 409
+ + +A I L Q VP S S+ ++ S++
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQGVVPDLVS--FSSLIAVFSRN 271
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 6/166 (3%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN---KRRSWQANKL 278
+ + LI + + + G + ++ KG ++ N + LV +W+ ++
Sbjct: 49 LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ R GIE + T N+++ C+ G D K S M G + + Y T+I C+
Sbjct: 109 V---VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR 165
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
EG A+ + K PS+ T +A++ GL K + +A I+
Sbjct: 166 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGIL 211
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 3/257 (1%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
++L+G K+G + AMD F GC + + A + L +++ ++ A LME
Sbjct: 135 LVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVA-LMEKITA 193
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I ++N ++ C+MG L++A ++ ++ G PDV+TYT+LI K+ R
Sbjct: 194 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 253
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L+ M +G + + I+ L+ + QA+ + M G PD VT + +I
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C++G + A +++ +M R L PN +Y +IH LC+ + A M K P
Sbjct: 314 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 373
Query: 360 SVDTISALLEGLKKNNQ 376
T + L++GL K+
Sbjct: 374 DTITYNILIDGLCKSGD 390
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFD 185
K G ++ A+D + GC V + + + L E R +A + F E+ + + D
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF-KEMALR-GLVLD 269
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +I+ + G + +A V M G PDV+T +T+I K R ++
Sbjct: 270 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G PN ++ I L R+ A +++ M++ PD +TYN++I G C+SG
Sbjct: 330 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A+ + ML P+ Y ++ C+ G+ + A + D + P+V T
Sbjct: 390 DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYG 449
Query: 366 ALLEGLKKNNQPCKAN 381
L+ GL K Q KA+
Sbjct: 450 TLISGLCKRRQLTKAS 465
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 9/256 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I A+ F M G +A + L ++R + L ++ + F D
Sbjct: 317 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP-DT 375
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I C+ G ++ A EM + G KPDV TY L+S F K + G+++
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PN+ T+ I L +R+ +A+ M+ G PD Y+ ++ G C+SG
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV----D 362
L+ ++ M R + N + +I +LC+ + A + ++++K +P
Sbjct: 496 LEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSL-FNAIRKEGMPHPYAYNS 553
Query: 363 TISALLEGLKKNNQPC 378
IS L++ K N PC
Sbjct: 554 IISTLIKSAKVN--PC 567
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + + +I C+ G + A + M+ G+ P+ + Y+ LI K + + +
Sbjct: 304 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 363
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C P+ T+N+ I L A M G +PD TYN+++ GFC++
Sbjct: 364 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKA 423
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ D A V+ M PN Y T+I LC+ A + + ++ P
Sbjct: 424 GNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVY 483
Query: 365 SALLEGLKKNNQ 376
S+L++GL K+ +
Sbjct: 484 SSLVDGLCKSGK 495
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 4/242 (1%)
Query: 144 YGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+G + +V + NA L V + R +A E+ F D+ ++N++I +C
Sbjct: 53 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLP--DVETWNVLITGYCLAREP 110
Query: 203 DKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
++A+ V+ EM++ GV P + T+ ++ K + + GC ++ T+
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ L ++ A LM + G P TYN ++ G C+ G L+ A + ++
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
P+ Y ++I L +E AY + K+ + V +AL+ GL + + +A+
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290
Query: 382 TI 383
++
Sbjct: 291 SV 292
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 136/260 (52%), Gaps = 1/260 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
++ + G+++ A + F M + +S N L L++S + + ++ F ++ I
Sbjct: 228 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIA 286
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+F++N++I C+ G L+ + + V+M+++G+ PDV+TY +LI + K E L
Sbjct: 287 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 346
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M GC P++ T+N I + +A + M+ G++P+ VTY+ +I FC+
Sbjct: 347 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 406
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + A K++ M L+PN Y ++I C+ G+ A+ + D ++ ++ T
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466
Query: 364 ISALLEGLKKNNQPCKANTI 383
+ALL+GL K + +A +
Sbjct: 467 YTALLDGLCKAGRMIEAEEV 486
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 2/219 (0%)
Query: 117 FIMRIMMLY-GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
F +M+ Y K G ++++ F M G V + N+ + + L+ + + E
Sbjct: 290 FTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNE 349
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + + DI ++N +I +C+ + +A+ EM+ G+KP+V+TY+TLI AF K+
Sbjct: 350 MKDVGCVP-DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 408
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ L+ M G PN T+ I +A KL+ M + G++ + VTY
Sbjct: 409 MMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 468
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
++ G C++G + A++V+ +ML + PN+++Y ++H
Sbjct: 469 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 507
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 4/267 (1%)
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
++LP+ R F++ + G +++ F DM G +V + N + L + DL
Sbjct: 249 RTLPKARSCNFLLHRLSKSGNGQLVRKF---FNDMIGAGIAPSVFTYNVMIDYLCKEGDL 305
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ + +++ E + D+ ++N +I + ++G L++ + EM+ +G PD+ITY
Sbjct: 306 ENSRRLFVQMRE-MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI+ + K + ++ M G PN+ T++ I + A KL M+R G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ P+E TY +I C++G+L A K+ + ML + N Y ++ LC+ G A
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + +K P+ +AL+ G K
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIK 511
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ I ++ ++I C+ GI++ A M LG++P+V YT+LI K+N E
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M C+G P++ F I + +A L+ M IE D Y ++ GF
Sbjct: 660 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+ G L A+K ++ M+ + ++P + ++ + G + A I K+ M++
Sbjct: 720 SQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA-IELKNEMER 772
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++ F E+G+L++A M+ P + L+ K ++ +N M+
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T+NV I +L + + +L M+ G+ PD VTYN +I G+ + G L+
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+++ M +P+ Y +I+ C+ A+ + P+V T S L+
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Query: 369 EGLKK 373
+ K
Sbjct: 402 DAFCK 406
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I A C+ G L +A+ ++ +M + GVK +++TYT L+ K R ++
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G PN + + + R A K++ M I+PD + Y +I G C
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ K + M R + N I T+I + G + A ++ ++ T
Sbjct: 550 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 609
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHF 394
L++GL CKA +V+ V +F
Sbjct: 610 LIDGL------CKA----GIVELAVDYF 627
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I A+ + G A EMQ +GV+ ++TY LI K E+ + M+ G
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN+A + I L A KL MQ G+ PD + +I G + G+L A
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ S M + + +Y +++ Q G+ + A + ++K +P LL
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 754
Query: 372 KKNNQ 376
K Q
Sbjct: 755 YKRGQ 759
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C F+V V +AN+ M+ F P + N ++ +SG+ + +
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K ++ M+G + P+ Y MI YLC+EGD + + + P V T ++L++G
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334
Query: 372 KK 373
K
Sbjct: 335 GK 336
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 144 YGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
YG V S NA L V+ + +K + E+ E + +++++NI+I+ FC G L
Sbjct: 161 YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSPNVYTYNILIRGFCTAGNL 219
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+ EM++ G P+V+TY T+I A+ K + L LM KG PNL ++NV
Sbjct: 220 EMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVV 279
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + + + ++++ M + PD VT+N +I G+C G+ A +++ M+ L
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN Y T+I+ +C+ G+ N A + P+ T + L++G + +A
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 383 IM 384
IM
Sbjct: 400 IM 401
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I F + G L +AY +M EM + G P +ITY LI+ R E +GL M
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G P++ +++ I + +A +L M GI PD TY+ +I+G C+ L
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
++ ML L P+ Y ++I+ C EGD + A + + ++K + P + T + L
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559
Query: 368 LEGLKKNNQPCKANTIM--ALVQRRVPH 393
+ G K ++ +A ++ L + VP+
Sbjct: 560 INGFNKQSRTKEAKRLLLKLLYEESVPN 587
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A F +M G V + N ++ + +L+ F E+ E+ ++ ++N
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM-ERNGCLPNVVTYN 242
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A+C++ + +A+ ++ M G+ P++I+Y +I+ ++ + + + + M +
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
P+ TFN I N QA L M + G+ P+ VTY +I C++G+L+ A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M R L PN + Y T+I Q+G AY + K+ ++ + P++ T +AL+ G
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I A+C G LDKA + EM + G PD++TY LI+ F K +R + L
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ + PN T+N L++ + + + LM KGFC
Sbjct: 577 LKLLYEESVPNEITYNT----LIDNCNNLEFKSALALM----------------KGFCMK 616
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A +V +ML + N ++Y +IH + G+ AY + K+ + + P TI
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Query: 365 SALLEGLKKNNQPCKANTIM 384
AL + L + + N ++
Sbjct: 677 MALAKSLYHEGKEVELNQLL 696
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ NL G P + ++N + ++ ++S + A + M G+ P+ TYN++I+GF
Sbjct: 154 IVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF 213
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C +G+L+M + M +PN Y T+I C+ A+ + + K P++
Sbjct: 214 CTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + ++ GL + Q + + I+ + +R
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKR 302
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 129/257 (50%), Gaps = 1/257 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
+Y KAG + +A +M G + + A + L + +L L E+ +K +Q
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQ 500
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ +N ++ C+ G +++A +M EM+ G+ PD ITYTT+I A+ + + + L
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P + TFNV + ++L+G M GI PD +TYN ++K C
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
++ K+Y M + + P+ Y +I C+ + A+ + K+ ++K +VP+V +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680
Query: 364 ISALLEGLKKNNQPCKA 380
+AL++ K + +A
Sbjct: 681 YNALIKRFYKKKKILEA 697
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 9/339 (2%)
Query: 52 VKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+ +K + +L +K N I + + + L+ AR+ ++ LL + +
Sbjct: 168 IGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKL--LDKLLSYGLVVTV 225
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
F+ RI + I+ A+ F + YG S N + L +K
Sbjct: 226 DSCNAFLSRIA---NNSEGIEMAIKVFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHR 279
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
LM++ + D+ S++ VI +C +G L KA +M +MQ G+KP+ TY ++I
Sbjct: 280 LLMQMDFRSSTP-DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
K + + M+ + P+ + I ANK M I PD
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+TY +I+GF + G + + ++ M+ R L P+ Y T+I C+ G+ A+ + +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ P++ T AL++GL K+ + AN ++ ++++
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I +C+ G + A+ + EM ++G+ P+++TY LI K + N L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG N+ +N + + QA KLM M+ GI+PD +TY VI +CR
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-----QEGDFNLAYIMCKDSMKKNWVP 359
G +D A K+ ML R L P + +++ C ++GD L ++ ++K VP
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM-----LEKGIVP 606
Query: 360 SVDTISALLE 369
T + L++
Sbjct: 607 DAITYNTLMK 616
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D ++ +I+ F + G + + + EM G+KPD +TYTTLI + K
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N MV G PN+ T+ I L AN+L+ M++ G++ + YN ++ G
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G+++ A K+ M + P+ Y T+I C+ GD + A+ + ++ + + P+V
Sbjct: 514 CKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573
Query: 362 DTISALLEGL 371
T + L+ G
Sbjct: 574 VTFNVLMNGF 583
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I+ A+ +M + G + + D+ L E+ ++ +Q +
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTV 573
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ FC +G+L+ ++ M + G+ PD ITY TL+ N ++
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+ T+N+ I+ R +A L M G P +YN +IK F +
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKK 693
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+ A++++ M G L+ + +IY + +EGD + +C ++++K
Sbjct: 694 ILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G +K A+ DM + G K + N+ + +L + + L E+ + I
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ-KIIP 361
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +I F ++G + A EM + PD ITYTTLI F + + L+
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P+ T+ I A L M + G+ P+ VTY +I G C+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ M + L N IY +M++ +C+ G+ A + K+ P T
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541
Query: 365 SALLEG 370
+ +++
Sbjct: 542 TTVIDA 547
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++IKA C+ G++DKA+ + EM G KP+V TYT LI +D + E NG+ M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G FP++ T+N I R A +L+ +M++ +P+ T+N +++G CR G
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A + ML L P+ Y +I LC+EG N+AY + + P T +A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ K + A+ + L+ R+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRK 505
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S++I+I CE+G L++A+ + +M + G +P TYT LI A + L++ M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +GC PN+ T+ V I L + +AN + M + GI P +TYN +I G+C+ G +
Sbjct: 328 IARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRV 387
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + M R PN + + ++ LC+ G A + K + P + + + L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 368 LEGLKKNNQ 376
++GL +
Sbjct: 448 IDGLCREGH 456
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + ++ A C+ G + A + M ++ K+G D T+L+ F + +++
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFD 254
Query: 246 LMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM +G C PN ++++ I L R +A L M G +P TY ++IK C
Sbjct: 255 LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M+ R PN Y +I LC++G A +C+ +K PSV T
Sbjct: 315 GLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITY 374
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+AL+ G K+ + A ++ ++++R
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKR 400
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F++E K + S N+++ + L + ++ ++ KLG+ P V+TYTTL+
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + LM GC PN+ + + I L R +A KL+ MQ G+ P+
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH--YLCQEG 340
VTY +++KG+ +G LD A + AM+ R N +IY +++ L Q+G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKG 702
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 195 AFCEMGILDKAYLVMVEMQKLGV-KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC L A V M + G P+ ++Y+ LI + R E GL + M KGC
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+ V I+ L ++ +A L M G +P+ TY ++I G CR G ++ A V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ + P+ Y +I+ C++G A+ + K+ P+V T + L+EGL +
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 374 NNQPCKA 380
+P KA
Sbjct: 419 VGKPYKA 425
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 36/261 (13%)
Query: 164 RDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+D + + AF L+ V EK + ++ +FN +++ C +G KA ++ M G+ PD++
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+Y LI ++ + L M P+ TF I + ++ A+ +GLM
Sbjct: 443 SYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGH--------------------------LDMAKKVYS- 315
R GI DEVT +I G C G LDM K
Sbjct: 503 LRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKL 562
Query: 316 ----AMLGR----RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
AMLG+ L+P+ Y T++ L + GD + ++ M + +P+V + +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTII 622
Query: 368 LEGLKKNNQPCKANTIMALVQ 388
+ GL + + +A +++ +Q
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQ 643
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 39/228 (17%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F ++ D +F +I AFC+ G D A + M + G+ D +T TTLI N +
Sbjct: 470 FDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC--NVGKT 527
Query: 240 GNGLWNL--------------------MVCKGC-----------------FPNLATFNVR 262
+ L+ L M+ KGC P++ T+
Sbjct: 528 RDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L+ + +++ LM+ G P+ Y ++I G C+ G ++ A+K+ SAM +
Sbjct: 588 VDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
PN Y M+ G + A + +++ + + S+LL G
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRG 695
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 26/245 (10%)
Query: 152 SLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
S N A +V++ R I F M V + FD N ++K G+ A+ V+V
Sbjct: 68 SPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIV 127
Query: 211 -----------EMQKL-----------GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
EM KL G + + Y++L+ + K + + + M
Sbjct: 128 ALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRME 187
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G + + + L + A M + + G D ++ GFCR +L
Sbjct: 188 ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLR 247
Query: 309 MAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISA 366
A KV+ M PN Y +IH LC+ G A+ + KD M +K PS T +
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTV 306
Query: 367 LLEGL 371
L++ L
Sbjct: 307 LIKAL 311
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 36/297 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F D GC+ TV + + L + + A A L + E+ Q ++
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTA-AAGLFKKMEEAGCQPNV 235
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I + C+ ++++A + M+ + PD+ TY +LI R + + L N
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY------------ 294
M PN+ TFNV + + + + +A + M G+EPD VTY
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 295 -----------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
N++IKG+C++ +D AK++++ M+ + L P+ Y T
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+IH LCQ G A + K+ +P + T S LL+G K KA + ++Q
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A+D F M + + N+ ++ L R K A L E+ +I +I
Sbjct: 247 KDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMT-SLNIMPNI 305
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI--GNGLW 244
F+FN+++ A C+ G + +A V M ++GV+PDV+TY++L+ + R EI L+
Sbjct: 306 FTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY--SLRMEIVEARKLF 363
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV------------ 292
+ M+ KGC P+ ++N+ I+ +R +A +L M G+ PD V
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 293 -----------------------TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
TY++++ GFC+ G+L A +++ M L P+ +Y
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+I +C+ G+ A + + + +P+V + ++ L K
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCK 527
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+NI+IK +C+ +D+A + EM G+ PD + Y TLI + R L+
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF 433
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+L T+++ + + +A +L +MQ ++PD YN++I C+
Sbjct: 434 KNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKF 493
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G+L A+K++S + + L+PN +IY T+I+ LC+EG
Sbjct: 494 GNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEG 529
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q D +FN +I C++G +A + + G +P V TYTT+I+ K
Sbjct: 158 KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETT 217
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
GL+ M GC PN+ T+N+ I L + +A + M+ I PD TYN +I
Sbjct: 218 AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G C A + + M +MPN + ++ +C+EG + A + K +
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Query: 359 PSVDTISALLEG 370
P V T S+L+ G
Sbjct: 338 PDVVTYSSLMYG 349
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI++ +I+I F + +D A+ V +M KLG++PD +T+ TLI+ K + +
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFF 188
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ GC P + T+ I L + A L M+ G +P+ VTYN++I C+
Sbjct: 189 DDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD 248
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++S M +R+ P+ Y ++I LC + A + + N +P++ T
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308
Query: 365 SALLEGLKKNNQPCKANTI 383
+ L++ + K + +A +
Sbjct: 309 NVLVDAICKEGKVSEAQGV 327
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMV-EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I F ++ A +MG A + + +M+ G+ PD+ T + LI F R ++ ++
Sbjct: 94 IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ TFN I L + QA + + G +P TY +I G C+
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ++ M PN Y +I LC++ N A + K P + T
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Query: 365 SALLEGL 371
++L++GL
Sbjct: 274 NSLIQGL 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA I A F +M G + N + L + L+ Q + ++
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP- 443
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++++++ FC+ G L KA+ + MQ +KPD+ Y LI A K + L+
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + +G PN+ + I +L + +A + M+ G PDE +YN++I+GF
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 219 PDVITYTTLISAFYKDNRPEIGN-GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P +I +T L+SA K + L M G P++ T ++ I + +R A
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ M + G++PD VT+N +I G C+ G A + + P Y T+I+ LC
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ G+ A + K + P+V T + L++ L K+
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKD 248
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 7/211 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
+ +++ + A+R D + L + QG + +++G + G ++ A D
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEM--IHQGLTPDNVNYNTLIHGLCQLGRLREAQD 431
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKA 195
F +MH G + + + L + L +AF L V + +++ DI +NI+I A
Sbjct: 432 LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG--KAFRLFRVMQSTYLKPDIAMYNILIDA 489
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C+ G L A + E+ G+ P+V YTT+I+ K+ + + M GC P+
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPD 549
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
++NV I+ + + +A +L+G M+ G
Sbjct: 550 EFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
EK ++ DI+++N + C + LD+A ++ M ++GV P+ +TYTTLIS KD
Sbjct: 379 EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDM 438
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L+ M KG P++ T+NV I K +A + M++ G PD TY +
Sbjct: 439 VEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASL 498
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C +G +D+A K++ M R PN Y +I L +EG A+ + D +K
Sbjct: 499 VHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGL 558
Query: 358 VPSVDTISALLEGLKKNNQ 376
+P SAL+ L +N+
Sbjct: 559 IPDDSLYSALVGSLHTDNR 577
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + TV + + L+ +RD+ ++A E+ ++ D++ + VI A+C G + +
Sbjct: 242 GIEATVGTYTILVDSLSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRR 300
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V+ E GV+P+ TY LI+ F K + E L M +G N FN I
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMID 360
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
K A K+ M++ G+E D TYN + G CR LD AK + M+ ++P
Sbjct: 361 GYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
N Y T+I C++GD A + ++ +K PSV T + +++G K
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGS 472
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++V+ C+ G +D A ++ +M + GV + + Y +L+ + + + +
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G + T+ + + L R + L M+ + D Y VI +CR+G+
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+ A KV +G + PN + Y +I+ C+ G A ++ D
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLAD 342
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 9/309 (2%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMM---LYG---KAGMIKHAMDTFYDMHLYGCK 147
R + L E ++ R+ GF + I L G K G + A + D G
Sbjct: 162 RTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNI 221
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
V +LN + L + L + +L E+ EK + D+ ++N ++ A+C G++ +A+
Sbjct: 222 VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEK-GVYADLVTYNTLVNAYCRRGLVSEAFG 280
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ M G+KP + TY LI+ K+ E + + M+ G PN ATFN +
Sbjct: 281 LVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESC 340
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
K W+A ++ M + G+ PD ++++ ++ F R+G L A + M G L+P+
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-AL 386
IY +I+ C+ D + A M + +++ V V T + LL GL + A+ + +
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 387 VQRRV-PHF 394
V+R V P F
Sbjct: 461 VERGVFPDF 469
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 1/240 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC V + N L L + L E+ E+ + D ++ +I +C+ G + K
Sbjct: 429 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER-GVFPDFYTLTTLIHGYCKDGNMTK 487
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + M +KPDV+TY TL+ F K E LW M+ + FP+ +F++ I
Sbjct: 488 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 547
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ +A +L M+ GI+P VT N +IKG+ R+G+L A + M+ + P
Sbjct: 548 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 607
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ Y T+I+ +E +F+ A+ + + ++ +P++ T +A+L G ++ + +A ++
Sbjct: 608 DCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVL 667
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 117/235 (49%), Gaps = 1/235 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A+ F M L K V + N + + +++ + ++ + I
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR-EIFP 537
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
SF+I+I FC +G++ +A+ + EM++ G+KP ++T T+I + + N
Sbjct: 538 SYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFL 597
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ +G P+ T+N I V + +A L+ M+ G+ P+ VTYN ++ GF R
Sbjct: 598 NTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRH 657
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G + A+ V M+ + + P++ Y ++I+ + + A+ + + +++ +VP
Sbjct: 658 GRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ SF+ ++ F G L +A +M+ +G+ PD + YT LI+ + +++ +
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV +GC ++ T+N + L + A++L M G+ PD T +I G+C+
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A ++ M R L P+ Y T++ C+ G+ A + D + + PS +
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542
Query: 365 SALLEGL 371
S L+ G
Sbjct: 543 SILINGF 549
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + I+I +C + A + EM + G DV+TY TL++ + + + L+
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G FP+ T I +A L M ++PD VTYN ++ GFC+
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ AK+++ M+ R + P+ + +I+ C G + A+ + + +K P++ T
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRVP 392
+ +++G + KAN + ++ VP
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVP 606
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K GMI AMD F M +G +
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHG------------------------------------LSP 407
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I A C++G +D A + +M GV P+++ + +L+ ++ E L
Sbjct: 408 NVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELV 467
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G PN FN I +L N R + +L+ LM+ G+ PD +Y +I G+C +
Sbjct: 468 YEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLT 527
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A+KV+ M+ L P Y T++H C + AY + ++ ++K P V T
Sbjct: 528 GRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTY 587
Query: 365 SALLEGL 371
+ +L GL
Sbjct: 588 NTILHGL 594
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 16/252 (6%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+++ E ++ D FS+ +I +C G D+A V M +G+ P +TY TL+ +
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYC 560
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+R + L+ M+ KG P + T+N + L +R +A +L M G + D
Sbjct: 561 SASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIY 620
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN+++ G C+S +D A K++ ++ + L N + MI L + G A +
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680
Query: 353 MKKNWVPSVDT----------------ISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
VP+V T +L ++KN + + ALV+R +
Sbjct: 681 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 740
Query: 397 NQLSAFKSILSK 408
++ A+ S L +
Sbjct: 741 SRAGAYLSKLDE 752
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 131 IKHAMDTFYD-MHLYGCKRTVKSLNAALKVL-TESRDLKAIQAF-LMEVPEKFHIQFDIF 187
+ AMD M GC S LK L E R +A++ +M ++
Sbjct: 141 VGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV 200
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S++IVI F G +DK Y + +EM G+ PDV+TYTT+I K + G++ M
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G PN T+N I ++ + + +++ M G++PD TY ++ C++G
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A+ + +M+ + + P Y +IH +G
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + +G + ++ EM G+KPD TY +L++ K+ R ++
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDS 329
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P ++T+ + I K + + + LM G+ PD +N+ + + G
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A +++ M L PN Y +I LC+ G + A + + + P++ ++
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449
Query: 367 LLEGL 371
L+ GL
Sbjct: 450 LVYGL 454
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 4/198 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D + N ++K C + +A V+++ M +LG PD ++YT L+ + R E
Sbjct: 122 RMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEAL 181
Query: 242 GLWNLMV---CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L ++M + C PN+ ++++ I + + + L M GI PD VTY VI
Sbjct: 182 ELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVI 241
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C++ D A+ V+ M+ PN Y +IH G + M ++ +
Sbjct: 242 DGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLK 301
Query: 359 PSVDTISALLEGLKKNNQ 376
P T +LL L KN +
Sbjct: 302 PDCYTYGSLLNYLCKNGR 319
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 5/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ + G ++H F + G + ++N LK L + + +A+ L +PE
Sbjct: 100 FCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPE-LGCM 158
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D S+ I++K C ++A + M + P+V++Y+ +I+ F+ + + +
Sbjct: 159 PDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKP 218
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M+ +G P++ T+ I L + +A + M G +P+ TYN +I G
Sbjct: 219 YNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHG 278
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ G ++ M R L P+ Y ++++YLC+ G A ++K P
Sbjct: 279 YLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPK 338
Query: 361 VDTISALLEG 370
V T L+ G
Sbjct: 339 VSTYGILIHG 348
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE--------- 238
++N ++ +C +D AY + EM + GV P V+TY T++ ++ R
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 610
Query: 239 --------------IGNGL------------WNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
I NGL + + KG N+ TF + I L+ R
Sbjct: 611 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 670
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A L + G+ P+ VTY LV + G L+ ++SAM PN ++ +
Sbjct: 671 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 730
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ L GD + A ++N+ T S L+
Sbjct: 731 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLM 766
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ +++ +S R D E + + S+ E ++ Y A I A F
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 572
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G V + N L L +++ + + + + DI+++NI++ C+
Sbjct: 573 REMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKCDIYTYNIILNGLCK 631
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+D+A+ + + G++ ++IT+T +I A K R E L+ + G PN+ T
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
+ + ++L+ + + + L M++ G P+ N +++ G + A S +
Sbjct: 692 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 750
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
++ L +G G + +L+G + A + + +M G K + + N L L +S
Sbjct: 573 REMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 632
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ + K +Q +I +F I+I A + G + A + + G+ P+V+T
Sbjct: 633 NCVDEAFKMFQSLCSK-GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y + ++ E + L++ M G PN N ++ L+++ +A + +
Sbjct: 692 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 751
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+ T +L++ F + AK +
Sbjct: 752 ERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 7/289 (2%)
Query: 84 EDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHL 143
E TV RLA A D +++ L+ + E ++ + + +AG A+ TFY
Sbjct: 55 EATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASD 114
Query: 144 YGCKR-TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
GC+ V+ N L L + A+ + + K + +++++N++I+A C+ +
Sbjct: 115 LGCRDPGVRVYNHLLDALLRENMVGAVVP-VYDNMRKAGVDPNVYTYNLLIRALCQNDRV 173
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A ++ EM + G PD +++ T++S K R E G V P A++N
Sbjct: 174 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAV 228
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L + R W+ ++ M + G++P+ VTY ++ FC++ L MA + + M+
Sbjct: 229 VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC 288
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN + ++ ++G + A M + + W PS + + L+ GL
Sbjct: 289 TPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 337
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ ++ M G + S N ++ L DLK F + ++ + + +
Sbjct: 306 GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM-KRNALLPNATT 364
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ ++ F G LD A L+ EM+ G KP+V+ YT +I K + L + M+
Sbjct: 365 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 424
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN TFN I L + R +A + M+R G P++ TYN ++ G R G+
Sbjct: 425 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 484
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + ML + Y T+I+ LCQ A ++ M + P T +A++
Sbjct: 485 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 544
Query: 369 EGLKKNNQ 376
K +
Sbjct: 545 HAYCKEGK 552
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 7/242 (2%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + A ++ L + D+ +Q L E+ + + + I AF G D+
Sbjct: 46 GSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLR-GVACTEDALVAAIGAFARAGSADR 104
Query: 205 AYLVMVEMQKLGVK-PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A LG + P V Y L+ A ++N +++ M G PN+ T+N+ I
Sbjct: 105 ALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLI 164
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ L R A K++ M R G PDEV++ ++ G C+ G ++ A+ + +
Sbjct: 165 RALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA-----ETV 219
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P + Y ++H LC E + + + +++ P+V T + +++ K + A I
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279
Query: 384 MA 385
+A
Sbjct: 280 LA 281
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 9/254 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE----SRDLKAIQAFLMEVPEKF 180
+ AG + AM + +M GCK V + VL + + I LM+
Sbjct: 372 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD----- 426
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + +FN +I C+ G + +A V M++ G P+ TY L+ +++ +
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M+ G +L T+N I L A L+G M GI+PD T+N +I
Sbjct: 487 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C+ G + +A + M N Y +I LC +G + A + + + P+
Sbjct: 547 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPN 606
Query: 361 VDTISALLEGLKKN 374
T + L+ + N
Sbjct: 607 EATWNVLVRAIFTN 620
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NIV+K C G + +A ++ EM + V PD+++Y TLI+ K + + GL M
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GCFPN T + L R +A +L+ M++ G + D V Y +I GFC +G+LD
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
K+++ MLG+ + N Y ++H LC+ G + A + + P V T + L++
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
GL K+ + A ++ L+ + S+ + S L K
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 220
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I ++ +++ ++ C +G +A V+ M + G+ PDV+TYT LI KD R
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L NLMV KG P+ T+NV + L + A K++ +M G + D VTYN ++KG
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253
Query: 302 CRSGHLDMAKKVYSAMLGRR--LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C G +D A K++++M L PN + +I LC+EG A + + +KK
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 313
Query: 360 SVDTISALLEGLKK 373
++ T + LL G K
Sbjct: 314 NLVTYNMLLGGCLK 327
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + AM +M + S N + L +++ LK L+E+ E + +
Sbjct: 12 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVT 70
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ C+ G +D+A ++ M+K G DV+ Y TLIS F + + G L++ M+
Sbjct: 71 CTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 130
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG N+ T++ + L + +AN ++ M GI PD VTY +I G C+ G
Sbjct: 131 GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRAT 190
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + M+ + P+ Y ++ LC+EG A+ + + ++K V T + L+
Sbjct: 191 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 250
Query: 369 EGL 371
+GL
Sbjct: 251 KGL 253
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 7/261 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGC-KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KA +K A+ +M GC +V + + R +A++ L+E +K D
Sbjct: 45 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME--LLEAMKKKGFDAD 102
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + +I FC G LD+ + EM G+ +V+TY+ L+ + + + N + N
Sbjct: 103 VVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN 162
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T+ I L R+ A L+ LM G EP VTYN+++ G C+ G
Sbjct: 163 AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEG 222
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN---WVPSVD 362
+ A K+ M+ + + Y T++ LC +G + A + +SM N P+V
Sbjct: 223 LVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL-FNSMFDNENCLEPNVF 281
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L+ GL K + KA I
Sbjct: 282 TFNMLIGGLCKEGRLTKAVKI 302
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
+N LK L + + + E+ K + DI S+N +I C+ L +A +++EM
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 59
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ G P+ +T TTL+ KD R + L M KG ++ + I N
Sbjct: 60 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ +L M GI + VTY+ ++ G CR G A V +AM + P+ Y +
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
I LC++G A + ++K PS T + LL GL K
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 220
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
Y+M L GC + K + A+++ + DL F VP F +++I+I FC+
Sbjct: 318 YNMLLGGCLKAGK-IKEAMELWKQVLDL----GF---VPNSF-------TYSILIDGFCK 362
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
M +L+ A + EM+ G+ P + Y TL+++ K+ E L+ M C P++ +
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 422
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN I + +L M G+ PD +T++ +I + G LD AK M+
Sbjct: 423 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482
Query: 319 GRRLMPNRKIYQTMIHYLCQEGD 341
P+ +Y +++ L +GD
Sbjct: 483 ASGFTPDALVYDSLLKGLSSKGD 505
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 6/287 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G++ A M G K V + N +K L + + +A++ F + ++ +
Sbjct: 220 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 279
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+FN++I C+ G L KA + +M K G +++TY L+ K + + LW
Sbjct: 280 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 339
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ G PN T+++ I R A L M+ G+ P YN ++ C+ G
Sbjct: 340 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ AK ++ M P+ + TMI + GDF + ++ P T S
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQL---SAFKSILSKS 409
L+ L K + +A + AL + F+ + L S K + SK
Sbjct: 460 TLINRLSKLGELDEAKS--ALERMVASGFTPDALVYDSLLKGLSSKG 504
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 6/281 (2%)
Query: 61 EKLFQLFKANAHNRIVIE-NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM 119
++ +LF + N +E N + F + L R + H+K + +G +
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI--HRKMVKKGSCGNLVT 317
Query: 120 RIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
M+L G KAG IK AM+ + + G + + + + R L + E+
Sbjct: 318 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM- 376
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ +F +N ++ + C+ G L++A + EM +PD+I++ T+I K
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ L MV G P+ TF+ I L +A + M G PD + Y+ +
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+KG G + M + + +RKI T++ LC
Sbjct: 497 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 1/175 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M+ A F +M +G + N + L + L+ ++ E+ + + DI SF
Sbjct: 365 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA-NCEPDIISF 423
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N +I + G + ++M ++G++PD +T++TLI+ K + MV
Sbjct: 424 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 483
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
G P+ ++ ++ L +K + + L+ M G D + ++ C S
Sbjct: 484 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 141/263 (53%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA + A +M G V + N+ + L +S ++ + L+E K ++ ++
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQ-LLETMVKRKVRPNL 243
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I +C+ G A+ ++ M + G PDV+T+ +LIS F + ++ + + +L
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHL 303
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PNL T+NV I L + R+ +A +L+ M GI PD +TYN +I FCR+
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ + M+ R ++P+ Y T+ L + F+ A+ + + +P++ T ++
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L+EGL + + +A ++A+++R
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRR 446
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 128/239 (53%), Gaps = 4/239 (1%)
Query: 152 SLNAALKVLTESR-DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
+ N L+ L ++R +A Q F E+ + H + ++N +I FC+ G +++A+ ++
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQ-HCDTNHITYNTLIGGFCKAGDMERAFQLLA 129
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
EM++ G PDV+T+++++ A N + + C P+ FN+ + L
Sbjct: 130 EMKERGHSPDVVTHSSIVQALC--NTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKAN 187
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A +++ M GI PD VTYN +I G C+S ++ A+++ M+ R++ PN Y
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I+ C+ G LA+ + + ++ P V T ++L+ G + ++ KA ++ L+++
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK 306
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ KAG ++ A +M G V + ++ ++ L + +L +A+Q F E
Sbjct: 115 FCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF----RESVECA 170
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D FNI++ C+ L +A ++ EM + G+ PDV+TY +LI K R E L
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV + PNL T+N I + A++L+ M + G PD VT+N +I GFC+
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+D A +V M PN Y +I LC G N A + + + +P + T
Sbjct: 291 KSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIIT 350
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
++L+ +N Q +A I L+ R
Sbjct: 351 YNSLIGIFCRNFQIEQAFQIQNLMVER 377
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I FC +++A+ + M + GV PD I+Y TL A K R + L
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G PNL TFN ++ L RR +A L+ +M+R G +P TY +++ G C++
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G +D AK+V M+ + P T++H L +EG +LA
Sbjct: 467 GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 3/280 (1%)
Query: 90 LAGA-RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
LAG R+FD H+++ KS ++ Y +AG+ A+ F M YGC
Sbjct: 187 LAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTP 246
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ + + + L + R Q+F + +F + D+ + ++ +C G + KA V
Sbjct: 247 DMVAFSIVISSLCKKRRANEAQSFFDSLKHRF--EPDVVVYTSLVHGWCRAGDISKAEEV 304
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+M+ G+KP+V TY+ +I + + + + +++ M+ GC PN TFN ++ V
Sbjct: 305 FSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVK 364
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R+ + K+ M+R G D ++YN +I+ CR +L+ A K+ + M+ + + PN
Sbjct: 365 AGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNAST 424
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ + + + D N A+ M + N P+ T + L+
Sbjct: 425 FNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILM 464
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
AF +S L RR + + + SL ++ +++G +AG I A + F
Sbjct: 250 AFSIVISSLCKKRRANEAQSFFD---SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFS 306
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM + G K V + + + L + E+ + + +FN +++ +
Sbjct: 307 DMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDA-GCDPNAVTFNSLMRVHVKA 365
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G +K V +M++LG D I+Y +I + +D E + NLMV KG PN +TF
Sbjct: 366 GRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTF 425
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N + A+++ M+ +P+ +TYN++++ F S DM K+ M
Sbjct: 426 NFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDE 485
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
++ PN Y+ +I C +N AY +M + +K P++ +LE L+K Q
Sbjct: 486 SQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQ 543
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM +G + TF+ ++ V + +A M+ +G PD V +++VI C+
Sbjct: 202 DLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKK 261
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+ + + L R P+ +Y +++H C+ GD + A + D P+V T
Sbjct: 262 RRANEAQSFFDS-LKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTY 320
Query: 365 SALLEGLKKNNQPCKANTIMA 385
S +++ L + Q +A+ + +
Sbjct: 321 SIVIDSLCRCGQITRAHDVFS 341
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G +K A+ + +M V S + + + + ++ A+L E+ + +
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM-KGLGLVP 330
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +VI FC G + +A V EM G PDV+TY TL++ K +R L
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G P+L TF I + A +L + R + PD VTYN +I G CR
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A +++ M R ++PN Y +I C++G A+ + +KK +P++ T
Sbjct: 451 GDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTY 510
Query: 365 SALLEG 370
+++++G
Sbjct: 511 NSIIKG 516
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 3/258 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+AG + A+ M G K + + N+ LK L + R KA + F ++ + D
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVF--RTMDQCSVAPD 261
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ SFNI+I FC +G + +A EMQ V PDV++++ LI F + +
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P+ + + I +A ++ M FG PD VTYN ++ G C+
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L A+K+ + M R + P+ + T+IH C++G+F A + +++ P V T +
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN 441
Query: 366 ALLEGLKKNNQPCKANTI 383
+L++G+ + KAN +
Sbjct: 442 SLIDGMCRKGDLAKANEL 459
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 15/301 (4%)
Query: 67 FKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL---PQGRREGFIMRIMM 123
F +R V + +F + + D+ L K L P G ++ M+
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDG-----VIYTMV 338
Query: 124 LYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ G +AG + A+ +M +GC V + N L L + L + L E+ E+
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER-G 397
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D+ +F +I +C G + A + + + ++PDV+TY +LI + N
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKAN 457
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW+ M + PN T+++ I K + A + M + G P+ TYN +IKG+
Sbjct: 458 ELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGY 517
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQE---GDFNLAYIMCKDSMKKNW 357
CRSG++ ++ M + P+ + T+IH Y+ +E G FN+ IM K+ ++ +
Sbjct: 518 CRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDA 577
Query: 358 V 358
V
Sbjct: 578 V 578
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 141/305 (46%), Gaps = 13/305 (4%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
+SR GA R + + LL + PQ + ++R Y ++ + A + F + +
Sbjct: 63 MSRRRGASRREIVSSLLASSPT-PQPQVFDLLIRT---YTQSRKPREAFEAFRLLLDHRV 118
Query: 147 KRTVKSLNAALKVLTESR-DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ NA L VL+ + A +A+ + + + + ++ NI++ ++C+ D A
Sbjct: 119 PVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEV--NAYTLNIMVHSYCKTLEFDGA 176
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V+ EM+K V PDV+T+ LI A ++ + L + M +G P + T+N ++
Sbjct: 177 DTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKG 236
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L RR +A ++ M + + PD ++N++I GFCR G + A K Y M R + P+
Sbjct: 237 LCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPD 296
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+ +I + G+ + A ++ VP + ++ G C+A ++
Sbjct: 297 VVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF------CRAGSMSE 350
Query: 386 LVQRR 390
++ R
Sbjct: 351 ALRVR 355
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I + CE G ++ A+ + EM K G P++ TY ++I + + + G M
Sbjct: 474 TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
FP+L TFN I + + A + +M++ + PD VTYN++I GF G++
Sbjct: 534 RQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNM 593
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
A +V+ M + P+R Y ++I+ G+ A+ + + + + + P
Sbjct: 594 QDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 1/192 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N ++ C+ L A ++ EM++ GV PD+ T+TTLI + + E L+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++ + P++ T+N I + K +AN+L M I P+ +TY+++I C
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A M+ + +PN + Y ++I C+ G+ + + N P + T
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545
Query: 365 SALLEG-LKKNN 375
+ L+ G +K+ N
Sbjct: 546 NTLIHGYIKEEN 557
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 5/295 (1%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
F+ LL+H+ +P ++ + +AG A + + + + +LN
Sbjct: 107 FEAFRLLLDHRVPVPASASNA----LLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNI 162
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ ++ + + E+ EK + D+ + N++I A G +D A ++ M
Sbjct: 163 MVHSYCKTLEFDGADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANR 221
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+KP ++TY +++ K R + ++ M P++ +FN+ I +A
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEA 281
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
K MQ + PD V+++ +I F R G +D A M G L+P+ IY +I
Sbjct: 282 VKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGG 341
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C+ G + A + + + +P V T + LL GL K ++ A ++ ++ R
Sbjct: 342 FCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER 396
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
FL E+ +K ++ +I ++N +IK +C G + K + +M++ V PD+IT+ TLI
Sbjct: 493 GFLDEMVKKGNLP-NIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ K+ ++N+M + P+ T+N+ I + A ++ M GIEPD
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPD 611
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
TY +I G +G+ A +++ M+ R P+ K
Sbjct: 612 RYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A D F ++ G ++K+ + ++ L L + E+ + + D+ +
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +IKA C G +D A+ ++ E+++ G++P V+TY L+ A K R E L MV
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P++ TF + I L ++ + ++ MQ FGI P+EV YN +I CR GH
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
A K++ M+ + + Y + LC+EG+ A
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHA 370
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
L G R D + L+ + + + + K+G + A + ++ + G
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + NA + L + ++K L + ++ D ++NI+I+ C+ +D+A +
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNS-GVELDRITYNIMIQGCCKASKMDEAIQLR 515
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M K G KPD+ T+ + + + E L + M +G P++ T+ I
Sbjct: 516 DDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKA 575
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ +AN+ + + + G+ P+ V YN +I G+ R+G++ A + M + P Y
Sbjct: 576 KDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTY 635
Query: 330 QTMIHYLCQEG 340
++++++C G
Sbjct: 636 NSLMYWMCHAG 646
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 41/239 (17%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+FNI + +C +G +++ ++ +M+ G+KPD++TY T+I + K N
Sbjct: 526 DLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYL 585
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN--------- 295
++ G PN +N I A ++ M+ GI+P VTYN
Sbjct: 586 TELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHA 645
Query: 296 --------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++I+GFC+ G +D A + M R + PN+ Y
Sbjct: 646 GLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTY 705
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
T++ + G+ A + + + VP + + L+ G C+ +++ +V+
Sbjct: 706 TTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF------CEVDSLDKMVE 758
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I + +I+++A G LD A V EM+ V PDV TYT +I A + + +
Sbjct: 175 IKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAML 234
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G P + T+NV + L R +A +L G M + P VT+ ++I G R
Sbjct: 235 AELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARG 294
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
V M G + PN IY MI + C++G + A + + + K +V T
Sbjct: 295 QQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTY 354
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ + + L K + A I+
Sbjct: 355 NLIAKALCKEGEMEHAEKIL 374
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG+ G I A+ M G + T + N+ + + + ++ ++A + K I+
Sbjct: 607 YGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVK-DIEL 665
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ + I+I+ FC++G +D+A + EM G+ P+ +TYTTL+ A+ K E + L+
Sbjct: 666 GVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV G I PD V+YN +I GFC
Sbjct: 726 DEMVSLG-----------------------------------IVPDSVSYNTLISGFCEV 750
Query: 305 GHLD 308
LD
Sbjct: 751 DSLD 754
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 127/338 (37%), Gaps = 37/338 (10%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S LA ++F + +L+ + E ++ + + G A+ F +M
Sbjct: 284 FGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMV 343
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLME-VPEKFHIQFDIFSFNIVIKAFCEMGI 201
G K+TV + N K L + +++ + L E + + +F+ ++V G
Sbjct: 344 SKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFN-SVVAWHLRGTGR 402
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD ++ EM +KP+ T I K + E +W ++ KG N+AT N
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIE--------------------------------- 288
I L +A K++ M G+E
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522
Query: 289 --PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD T+N+ + +C G ++ + M L P+ Y T+I C+ D + A
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ MK P+ +AL+ G +N A I+
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G++ A+ +M GC V + N L L + + L E+ E+ +
Sbjct: 282 FCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFP 340
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++F +I + + G ++KA + M + +KPDV+TY TLI F K + E N LW
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 400
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ + +PN ++ + I N +A +L M G E +T N ++KG+CR+
Sbjct: 401 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 460
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ A + S ML + ++P+ Y T+I+ +E + + A+ + +P V T
Sbjct: 461 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 520
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ +L G + + +A IM +++R V
Sbjct: 521 NVILNGFSRQGRMQEAELIMLKMIERGV 548
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + + ++ G + V +LN + L +++ ++ ++FL ++ EK + D+
Sbjct: 74 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDV 132
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I A+C G+L++A+ +M M G+KP V TY +I+ K + G+ +
Sbjct: 133 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 192
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ AT+N+ + A ++ M G+ PD V+++ +I ++G
Sbjct: 193 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 252
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A K + M L P+ IY +I C+ G + A + + +++ V V T +
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 312
Query: 367 LLEGLKKNNQPCKANTIMALVQRR--VPHF 394
+L GL K +A+ + + R P F
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDF 342
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 2/207 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ I+I FC G++ +A V EM + G DV+TY T+++ K+ + L+ M
Sbjct: 275 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 334
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G FP+ TF I +A L +M + ++PD VTYN +I GFC+ ++
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 394
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++++ M+ RR+ PN Y +I+ C G + A+ + + ++K + ++ T + ++
Sbjct: 395 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 454
Query: 369 EGLKKNNQPCKANTIMA--LVQRRVPH 393
+G + KA+ ++ L++ VP
Sbjct: 455 KGYCRAGNAVKADEFLSNMLLKGIVPD 481
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A+ F M K V + N + + +++ + ++ + I
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYP 410
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ S+ I+I +C MG + +A+ + EM + G + +IT T++ + + +
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KG P+ T+N I + + +A L+ M+ G+ PD +TYN+++ GF R
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 530
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
G + A+ + M+ R + P+R Y ++I+ + + A+ + + +++ +VP
Sbjct: 531 GRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + N ++ ++G +D A+ + E+ + GV+ +V T +I+A K+ + E +
Sbjct: 62 INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLS 121
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG FP++ T+N I + +A +LM M G++P TYN +I G C++G
Sbjct: 122 DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG 181
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
AK V ML + P+ Y ++ C+ + A + + + VP + + S
Sbjct: 182 KYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 241
Query: 366 ALLEGLKKN 374
AL+ L KN
Sbjct: 242 ALIGLLSKN 250
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + N ++K +C G KA + M G+ PD ITY TLI+ F K+ + L N
Sbjct: 447 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 506
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T+NV + + R +A +M M G+ PD TY +I G
Sbjct: 507 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQN 566
Query: 306 HLDMAKKVYSAMLGRRLMPNRK 327
+L A +V+ ML R +P+ K
Sbjct: 567 NLKEAFRVHDEMLQRGFVPDDK 588
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++++ + + L + ++ G+ + +L+ K ++ ++ +V
Sbjct: 30 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G N+ T N+ I L ++ + M+ G+ PD VTYN +I +CR G L+
Sbjct: 90 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ +M G+ L P Y +I+ LC+ G + A + + +K P T + LL
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209
Query: 369 EGLKKNNQPCKANTIMALV--QRRVPHFSSNQLSAFKSILSKS 409
+N+ A I + Q VP S SA +LSK+
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVS--FSALIGLLSKN 250
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 118/216 (54%), Gaps = 6/216 (2%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+L + E I+ DI S +I+I FC + +D V+ ++ KLG++P ++T+TTL++
Sbjct: 82 VYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNG 141
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL---MQRFGI 287
+ + + L++ M+ +G PN+ T+NV I L +S +AN+ +G M++ G
Sbjct: 142 LCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSL---SKSGKANEALGFLKQMEKVGC 198
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ V Y+ +I G+C G +D A+ V+ M+ + PN Y ++++ C+ A
Sbjct: 199 VPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQ 258
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ ++++K VP + T + ++ GL + +P A +
Sbjct: 259 LLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQL 294
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 103/192 (53%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q +++++N++I + + G ++A + +M+K+G P+V+ Y+TLI + + +
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++LMV KGC PN+ T+ + R +A +L+ R G+ PD VT+ +I G
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR+G A++++ + PN Y ++ LC+ G+ A+ + ++ + P++
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342
Query: 362 DTISALLEGLKK 373
+ L++ L K
Sbjct: 343 VIYTILIDSLCK 354
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 113/234 (48%), Gaps = 11/234 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++ ++ +C++ +++A ++ E + G+ PD++T+TT+IS + RP L+
Sbjct: 236 NVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLF 295
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G PN+ T+ V + L +A L MQR ++P+ V Y ++I C+
Sbjct: 296 RYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKC 355
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + K+++S ++ L PN Y ++ LC+EG A+ + + + P
Sbjct: 356 GKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAY 415
Query: 365 SALLEGLKKNNQPCKANTIM-----------ALVQRRVPHFSSNQLSAFKSILS 407
+ +++G ++ P A ++ A + + F +N + A K+++
Sbjct: 416 NVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDFPTNDIPALKTLIG 469
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + M + DM + G + V + N + L++S FL ++ EK ++ +
Sbjct: 146 GKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQM-EKVGCVPNVVN 204
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I +C G +D+A V M G P+V TYT+L++ + K R E L + +
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL 264
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P++ TF I L R A +L + G P+ +TY +++ G C+ G+L+
Sbjct: 265 RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLE 324
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ M + PN IY +I LC+ G + + + P+V T +AL+
Sbjct: 325 EAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALV 384
Query: 369 EGLKKNN 375
L K
Sbjct: 385 GALCKEG 391
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 99 IEHLLEHQKSLPQGRREGFIMRIM----MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKS 152
IE + E + L + R+G + I+ ++ G +AG A F + +G + +
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMT 309
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
L L + +L+ A E+ ++ ++ ++ + I+I + C+ G + + +
Sbjct: 310 YGVLLDGLCKHGNLEEAFALFQEM-QRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
G+KP+V TYT L+ A K+ + L+ M GC P+ +NV IQ + +
Sbjct: 369 IDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP 428
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLV 297
A +L+ M G D T L+
Sbjct: 429 SMARQLVEEMVNRGFSADAATRALL 453
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 171/377 (45%), Gaps = 50/377 (13%)
Query: 56 AERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF-DYIEHLLEHQKSLPQGRR 114
AE++P LF++ + N+ + + F + RLA R ++ +++ K+ +
Sbjct: 22 AEKNPLSALSLFESASRNKS--HSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCK 79
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLKAIQAF- 172
E + ++ Y K M A+DTF +M ++GCK V+S N L E + ++F
Sbjct: 80 EDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFS 139
Query: 173 ---------------------------------LMEVPEKFHIQFDIFSFNIVIKAFCEM 199
L++ +++ D+FS+ +I ++
Sbjct: 140 RYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKV 199
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC--FPNLA 257
G L A V EM GV DV Y LI F+K + G +W +V K C +PN+
Sbjct: 200 GDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLV-KDCSVYPNVV 258
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N+ I L R ++ ++ M + E D TY+ +I G C +G++D A +VY +
Sbjct: 259 TYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI 318
Query: 318 LGRRLMPNRKIYQTMIHYLCQEG----DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ L+ + + M++ C+ G F L +M K++ + +V + + L++GL +
Sbjct: 319 VESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-----TVVSYNILIKGLFE 373
Query: 374 NNQPCKANTIMALVQRR 390
N + +A +I L+ ++
Sbjct: 374 NGKVEEAISIWELLCKK 390
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 137 TFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
T Y + ++G CK LN ALK+ E+ D + D ++++ ++
Sbjct: 397 TTYGVLIHGLCKNG--RLNKALKIFKEAEDGPG--------------KLDAYAYSSMVDG 440
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C+ G +D+A ++ +M K G K D LI+ F + ++ E + M CKGC P
Sbjct: 441 LCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPT 500
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ ++N I+ L R +A + M +PD +T +L++ G C+ ++MA ++
Sbjct: 501 IVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQ 560
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
L + P+ +Y ++H LC A + + VP++ T + L+EGL K
Sbjct: 561 QALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVR 620
Query: 376 QPCKANTIMALVQRRVPH 393
KA+ I + + H
Sbjct: 621 DYEKASEIWDCILKDGLH 638
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A++ F +M GC T+ S N +K L ++ +F+ E+ EK + D+
Sbjct: 478 RASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK-EWKPDM 536
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++++ C+ ++ A + + G KPD+ Y L+ + E L++
Sbjct: 537 ITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSH 596
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PNL T N ++ L R +A+++ + + G+ PD ++YN+ IKG C
Sbjct: 597 MKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSR 656
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+ A + + L R ++P + ++
Sbjct: 657 ISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I S+N +IK C+ +AY + EM + KPD+IT + L+ ++ + E+ LW
Sbjct: 501 IVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQ 560
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ KG P++ +N+ + L + + A +L M+R P+ VT N +++G +
Sbjct: 561 QALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVR 620
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A +++ +L L P+ Y I LC + A D++ + +P+ T +
Sbjct: 621 DYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWN 680
Query: 366 ALL 368
L+
Sbjct: 681 ILV 683
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 120/280 (42%), Gaps = 5/280 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F +M + G V N + + D + + + + ++
Sbjct: 198 KVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNV 257
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I C+ G D++ + M K + D+ TY++LI + + ++
Sbjct: 258 VTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKE 317
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+V + T N + + ++ +L +M + + V+YN++IKG +G
Sbjct: 318 IVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGK 376
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ + + P Y +IH LC+ G N A + K++ S+
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436
Query: 367 LLEGLKKNNQPCKANTIMALVQRRV----PHFSSNQLSAF 402
+++GL K + +A +I+ + +R PH + ++ F
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGF 476
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I FC++G LD A V M K G P V TYT+LI A +KD R ++ + + M+
Sbjct: 649 YDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML 708
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ T+ I L +A KL+ +M++ G P+ VTY +I G +SG +D
Sbjct: 709 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVD 768
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
M+ ++++ M+ + PN Y+ +I++ C G + A+ + + + W V +++
Sbjct: 769 MSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVV 828
Query: 369 EGLKK 373
+G K
Sbjct: 829 QGFSK 833
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 120/257 (46%), Gaps = 51/257 (19%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ I+I +FC++G++++A EM+ +G P V+TYT L+ A+ K + + ++
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF 548
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQA----------------------------- 275
+ MV GC PN T++ + L S +A
Sbjct: 549 HRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIA 608
Query: 276 ----------------------NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+L+ +M G EP+ + Y+ +I GFC+ G LD A++V
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M +P Y ++I + ++ +LA + ++ + P+V T +A+++GL +
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728
Query: 374 NNQPCKANTIMALVQRR 390
+ KA +++++++R
Sbjct: 729 IGECQKALKLLSMMEKR 745
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI CE ++KA+L+ EM+ +GV PDV TYT LI +F K E +
Sbjct: 454 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWF 513
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC P++ T+ + + ++ QA+ + M G P+ +TY+ ++ G C++
Sbjct: 514 DEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKA 573
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A +VY+ M+G Y EG+ DS+ P+V T
Sbjct: 574 GESQKACEVYAKMIGTSDNVGSDFY--------FEGEHT-------DSI----APNVVTY 614
Query: 365 SALLEGLKKNNQPCKANTIM 384
AL++GL K ++ A ++
Sbjct: 615 GALIDGLCKAHKVVDAQELL 634
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + +A + F+ M G TV + + + + + R L L ++ E
Sbjct: 656 FCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES-SCTP 714
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I C +G KA ++ M+K G P+V+TYT+LI K + ++ L+
Sbjct: 715 NVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLF 774
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL-------------------------- 278
M+ +GC PN T+ V I H +A+ L
Sbjct: 775 TQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK 834
Query: 279 ----MGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---GRRLMPNRKI 328
+GL++ G+ Y L+I F ++G L+ A +++ M+ + ++
Sbjct: 835 FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT 894
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y ++I LC A+ + + +K VP + L++GL K N+
Sbjct: 895 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNK 942
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 29/274 (10%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G+I+ A F +M GC +V + A L +++ + + + FH
Sbjct: 500 FCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVP-------QASDIFHRMV 552
Query: 185 D------IFSFNIVIKAFCEMGILDKAYLVMVEM----QKLG------------VKPDVI 222
D +++ ++ C+ G KA V +M +G + P+V+
Sbjct: 553 DAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVV 612
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TY LI K ++ L ++M GC PN ++ I + A ++ M
Sbjct: 613 TYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G P TY +I + LD+A KV S ML PN Y MI LC+ G+
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K+ P+V T ++L++GL K+ +
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGK 766
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ + D +I E + D+A + M+ P+V+TY TL++ F K +
Sbjct: 266 EREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQL 325
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ ++M+ +GC PN + FN + N R A KL+ M G P V YN+
Sbjct: 326 GWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIF 385
Query: 298 IKGFCRSGH-------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
I C SG L +A+KVY ML + N+ LC G F+ A+ + K
Sbjct: 386 IGSIC-SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIK 444
Query: 351 DSMKKNWVPSVDTISALL 368
M+K +VP T S ++
Sbjct: 445 LMMRKGFVPDTSTYSKVI 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 22/338 (6%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK F LF+ + VI + Y + + + + +S+
Sbjct: 472 EKAFLLFQ-EMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTA 530
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT---ESRDLKAIQA------ 171
++ Y K + A D F+ M GC + +A + L ES+ + A
Sbjct: 531 LLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS 590
Query: 172 ------FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
F E I ++ ++ +I C+ + A ++ M G +P+ I Y
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI F K + + ++ M G P + T+ I + RR A K++ M
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES 710
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
P+ VTY +I G CR G A K+ S M R PN Y ++I L + G +++
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMS 770
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + P+ T L+ N C A +
Sbjct: 771 LQLFTQMITQGCAPNYVTYRVLI------NHCCAAGLL 802
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 100/240 (41%), Gaps = 16/240 (6%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFD 185
+ G + A+ M GC V + + + L +S + ++Q F + + +
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY- 786
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ ++I C G+LD+A+ ++ EM++ V Y +++ F K +G L
Sbjct: 787 -VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLG--LLE 843
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQA----NKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ G + + I R +A ++M + I + TY +I+
Sbjct: 844 ELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKD-TYTSLIQAL 902
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN----LAYIMCKDSMKKNW 357
C + L+ A ++YS + + ++P + +I L + +N L Y MC + + NW
Sbjct: 903 CLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV--NW 960
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW-QANKLMGL 281
T L+ +D+R +G L N++V K C + +W +A + +G
Sbjct: 155 TTERLLREIGEDDREVLGR-LLNVIVRKCC----------------RHGAWAKALEELGR 197
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
++ FG P TYN +++ +G +DM +V M ++ LC+EG
Sbjct: 198 LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGR 257
Query: 342 FNLAYIMC-KDSMKKNWVPSVDTISALLEG 370
++ A +M ++ K + V IS L+E
Sbjct: 258 WSDALVMIEREDFKLDTVLCTQMISGLMEA 287
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 137/270 (50%), Gaps = 7/270 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + R K + F E+ E
Sbjct: 60 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 119
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 120 Y-PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G
Sbjct: 179 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 238
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+I+ LC++GD N A+ + + K P
Sbjct: 239 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPD 298
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRR 390
T + L++G CK + A + R
Sbjct: 299 KFTYTTLIDGC------CKEGDLDAAFEHR 322
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 183
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 184 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 304 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSV 363
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 364 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 397
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DL + E+ K ++ D
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMK-GLKPDK 299
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT +IS ++ RP +
Sbjct: 300 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLRE 359
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P TYN+++ G
Sbjct: 360 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
+Y KAG + +A +M G + + A + L + +L L E+ +K +Q
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK-GLQ 500
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ +N ++ C+ G +++A +M EM+ G+ PD ITYTT+I A+ + + + L
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P + TFNV + ++L+G M GI PD +TYN ++K C
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
++ K+Y M + + P+ Y +I C+ + A+ + K+ ++K +VP+V +
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680
Query: 364 ISALLEGLKK 373
+AL++ K
Sbjct: 681 YNALIKRFYK 690
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 9/339 (2%)
Query: 52 VKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+ +K + +L +K N I + + + L+ AR+ ++ LL + +
Sbjct: 168 IGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKL--LDKLLSYGLVVTV 225
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
F+ RI + I+ A+ F + YG S N + L +K
Sbjct: 226 DSCNAFLSRIA---NNSEGIEMAIKVFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHR 279
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
LM++ + D+ S++ VI +C +G L KA +M +MQ G+KP+ TY ++I
Sbjct: 280 LLMQMDFRSSTP-DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
K + + M+ + P+ + I ANK M I PD
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+TY +I+GF + G + + ++ M+ R L P+ Y T+I C+ G+ A+ + +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ P++ T AL++GL K+ + AN ++ ++++
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I +C+ G + A+ + EM ++G+ P+++TY LI K + N L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG N+ +N + + QA KLM M+ GI+PD +TY VI +CR
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-----QEGDFNLAYIMCKDSMKKNWVP 359
G +D A K+ ML R L P + +++ C ++GD L ++ ++K VP
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM-----LEKGIVP 606
Query: 360 SVDTISALLE 369
T + L++
Sbjct: 607 DAITYNTLMK 616
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D ++ +I+ F + G + + + EM G+KPD +TYTTLI + K
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N MV G PN+ T+ I L AN+L+ M++ G++ + YN ++ G
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G+++ A K+ M + P+ Y T+I C+ GD + A+ + ++ + + P+V
Sbjct: 514 CKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573
Query: 362 DTISALLEGL 371
T + L+ G
Sbjct: 574 VTFNVLMNGF 583
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I+ A+ +M + G + + D+ L E+ ++ +Q +
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTV 573
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ FC +G+L+ ++ M + G+ PD ITY TL+ N ++
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+ T+N+ I+ R +A L M G P +YN +IK F +
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRK 693
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
A++++ M G L+ + +IY + +EGD + +C ++++K
Sbjct: 694 FXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G +K A+ DM + G K + N+ + +L + + L E+ + I
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ-KIIP 361
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +I F ++G + A EM + PD ITYTTLI F + + L+
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P+ T+ I A L M + G+ P+ VTY +I G C+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ M + L N IY +M++ +C+ G+ A + K+ P T
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541
Query: 365 SALLEG 370
+ +++
Sbjct: 542 TTVIDA 547
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ +A++ FY M G + N + L S L ++ ++ I ++ F
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR-KIDPNVIFFT 794
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I F + G L +A + EM + V P+++TY +LI+ F R +++LMV K
Sbjct: 795 ALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GCFP++ T+N I +R KL M G+ D TYN +I G+C++G L++A
Sbjct: 855 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+KV++ M+ + P+ Y ++ LC G A +M +D K + T + +++G
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974
Query: 371 LKKNNQ 376
+ +N++
Sbjct: 975 MCRNDK 980
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 7/232 (3%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
+ N L L S + + L ++ ++ I D+F+F +I AF + G LD+A + +
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKR-RINPDVFTFTALIDAFVKQGNLDEAQELYKQ 266
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + + P+ +TY +LI+ R ++LM KGCFPN+ T+N I RR
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR 326
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
KL M R G+ D TYN +I G+C+ G L +AK ++S M+ + P+ +
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++H LC G+ A + D + + ++ GL CKA+ +
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL------CKADKV 432
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
N + L ++ D+ L E+ +K + D+ ++N ++ C G +A ++ +M
Sbjct: 174 NTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMT 233
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
K + PDV T+T LI AF K + L+ M+ PN T+N I L R +
Sbjct: 234 KRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLY 293
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A K LM G P+ VTYN +I GFC+S ++ K++ M L+ + Y T+I
Sbjct: 294 HAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLI 353
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
H CQ G +A + + P + T LL GL N +
Sbjct: 354 HGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
I +L E I D++SF I+I FC A ++ +M KLG +P ++T +L+
Sbjct: 633 IVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLL 692
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F + NR + L + M G PN+ +N I L R A ++ M++ GI
Sbjct: 693 NGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIV 752
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
D VTYN +I G C SG A ++ M+ R++ PN + +I +EG+ A +
Sbjct: 753 ADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNL 812
Query: 349 CKDSMKKNWVPSVDTISALLEGL 371
K+ ++++ P++ T ++L+ G
Sbjct: 813 YKEMIRRSVHPNILTYNSLINGF 835
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A+D F +M +V L + R + + F ++ E F I D++SF I
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQM-ELFGISHDLYSFTI 105
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I FC L A ++ +M KLG P ++T+ +L+ F NR L MV G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMA 310
PN+ +N I L A +L+ M++ G + D VTYN ++ G C SG A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M RR+ P+ + +I ++G+ + A + K ++ + P+ T ++L+ G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285
Query: 371 L 371
L
Sbjct: 286 L 286
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F V+ A +M D + +M+ LG+ D+ ++T LI F + +R + L
Sbjct: 615 IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T + R +A L+ M G+EP+ V YN VI G C++
Sbjct: 675 KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNR 734
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A +++ M + ++ + Y T+I LC G + A + +D +K+ P+V +
Sbjct: 735 DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFT 794
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPH 393
AL++ K +A + + RR H
Sbjct: 795 ALIDTFVKEGNLLEAKNLYKEMIRRSVH 822
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I FC+ ++ + EM G+ D TY TLI + + + + ++
Sbjct: 859 DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G P++ T+N+ + L N + +A ++ +Q+ ++ D +TYN++I+G CR+
Sbjct: 919 NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRN 978
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ A ++ ++ + + + Y TMI LC+ G A +C + ++PS
Sbjct: 979 DKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 6/212 (2%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+ G KH D M GC V + N + +S+ ++ E+ + + D
Sbjct: 839 GRLGDAKHMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG-D 894
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
F++N +I +C+ G L+ A V M GV PD++TY L+ + + E +
Sbjct: 895 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ ++ T+N+ IQ + + +A L + R G++ D + Y +I G CR+G
Sbjct: 955 DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMI--HY 335
A K+ + M MP+ +IY + HY
Sbjct: 1015 LRREADKLCTRMKEDGFMPSERIYDETLRDHY 1046
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
D A+ + EM + P ++ +T +++A K N+ +I L++ M G +L +F +
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I R A L+G M + G +P VT ++ GFC+ A + +M
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
L PN IY T+I+ LC+ D N A + KK V T + L+ GL + + A
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775
Query: 382 TIM-ALVQRRV 391
++ +V+R++
Sbjct: 776 RLLRDMVKRKI 786
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + HA TF M GC V + N + +SR ++ + + + D F+
Sbjct: 290 GRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG-DTFT 348
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL--WNL 246
+N +I +C++G L A + M GV PD+IT+ L+ + EIG+ + +N
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG--EIGSAMVKFND 406
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + + +N+ I L + +A +L + G++PD TY ++I G C++G
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
A +++ RR+ + I Q +L + G N
Sbjct: 467 RREADELF-----RRMKEDGIICQAEDGHLGEHGTNN 498
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L + F R E L+ MV P++ F + + N RR M+ FG
Sbjct: 36 LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++ ++I FCR L +A + M+ P+ + +++H C + A+
Sbjct: 96 ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ +K + P+V + L++ L KN
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGD 185
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 124/252 (49%), Gaps = 1/252 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K K A+ + DM G V + + L + ++KA + + + KF +
Sbjct: 262 YCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMI-KFSVTP 320
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +N +I A+C++G + +A + +E+++ V PDV TY+ LI +R E ++
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G N T+N I + + +A ++ M G+EP+ +T++ +I G+C+
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+L A +YS M+ + L P+ Y MI C+ G A + D + P+ TI
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500
Query: 365 SALLEGLKKNNQ 376
S LL+GL K+ +
Sbjct: 501 SCLLDGLCKDGK 512
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 149/335 (44%), Gaps = 20/335 (5%)
Query: 60 PEKLFQLFKANAH----NRIVIENKYAFEDTVSRLAGARRFDYIEHL-------LEHQKS 108
PEK QL+ A H ++++ +Y D V L + + + L L+ K
Sbjct: 54 PEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKF 113
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P E ++++ K +++ A+ + H G T+++ N L VL ++ +
Sbjct: 114 TPNVYGE-----LIIVLCKMELVEEALSMY---HKVGAALTIQACNVLLYVLVKTGRFEL 165
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ E+ + + +F +I C G L +A + EM+ G+ P VI YT LI
Sbjct: 166 LWRIYEEMISN-GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILI 224
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
DN+ E + M G +PN+ T+N + + QA +L M G+
Sbjct: 225 RGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLV 284
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD VT+ ++I G C+ G + A+ ++ M+ + PN +Y ++I C+ GD + A +
Sbjct: 285 PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMAL 344
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + P V T S L+ GL ++ +A I
Sbjct: 345 FLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I + N+++ + G + + + EM G+ P VIT+ TLI +
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLL 199
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M KG P + + + I+ L + + +A + M+ G+ P+ TYN ++
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM 259
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C+ + A ++Y MLG L+P+ + +I LC+ G+ A + + +K +
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P++ ++L++ K +A + ++R
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELER 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 147/402 (36%), Gaps = 107/402 (26%)
Query: 76 VIENKYAFE---DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
V N Y + D +LA A+ + L +Q L +G + +++ G K G
Sbjct: 248 VYPNVYTYNTLMDGYCKLANAK-----QALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A + F +M + + N+ + + D+ A +E+ E+F + D+F+++
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL-ERFEVSPDVFTYS 361
Query: 191 IVIKAFCEM-----------------------------------GILDKAYLVMVEMQKL 215
I+I+ C + G +DKA + +M +
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
GV+P+VIT++TLI + K + G+++ MV K P++ T+ I +A
Sbjct: 422 GVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEA 481
Query: 276 NKLMGLMQRFGIEPD--------------------------------------------- 290
KL M GI P+
Sbjct: 482 LKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPS 541
Query: 291 ---EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
V Y +I G C+ G A K++S M L P+ IY M+ G F + YI
Sbjct: 542 LTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLR-----GLFQVKYI 596
Query: 348 MC---KDSMKKNWVPSVDTISALLE-----GLKKNNQPCKAN 381
+ D +K +P+ L E G K+ Q C +
Sbjct: 597 LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKD 638
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 5/259 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLME 175
F ++ YG AG+ + ++ F M G +V + N+ L VL R A Q F E
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF-DE 225
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + + + D ++FNI+I+ FC ++D+ + EM + PDV+TY TL+ +
Sbjct: 226 MLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAG 285
Query: 236 RPEIGNGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ +I + + MV K PN+ T+ I+ K+ +A L+ M G++P+++T
Sbjct: 286 KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT 345
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
YN +I+G C + LD K++ M+G +P+ T+I C G A+ + +
Sbjct: 346 YNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 405
Query: 353 MKKNWVPSVDTISALLEGL 371
+ P T S L+ L
Sbjct: 406 SELRVQPDSATYSVLVRSL 424
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 134/288 (46%), Gaps = 12/288 (4%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ +M G K + N ++ L E++ L I+ L + D + N +
Sbjct: 326 EALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTL 385
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-- 250
IKA C MG L++A+ V +M +L V+PD TY+ L+ + + ++ + K
Sbjct: 386 IKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEI 445
Query: 251 -----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
GC P +A +N ++L + ++ +A ++ + + G + D +Y +I G CR G
Sbjct: 446 LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREG 504
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + ML R +P+ + Y MI L ++GD LA+ + +K + +P+
Sbjct: 505 TPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFH 564
Query: 366 ALLEGL-KKNNQPCKANTIMALVQRRVPH---FSSNQLSAFKSILSKS 409
++L L +K A+ + +++RR+ S++ + S L +S
Sbjct: 565 SILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQS 612
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 23/332 (6%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML------YGKAGMIK 132
NK + + L A++ D I+ +LE + G GFI L + G ++
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEILEGM--VGDG---GFIPDTCTLNTLIKAHCTMGKLE 396
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI------ 186
A F M + + + ++ L + D + + F E+ EK + D+
Sbjct: 397 EAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLV 456
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N + + C G KA V ++ K G + D +Y TLI ++ PE G L L
Sbjct: 457 AAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVL 515
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + P+ T+ + I L+ K A+K + M + P ++ ++ G
Sbjct: 516 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGC 575
Query: 307 LDMAKKVYSAMLGRRLMPNRKI----YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ + ML RR+ N + + ++ +LCQ A M S++K +D
Sbjct: 576 AHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDID 635
Query: 363 TISALLEGLKKNNQPCKANTI-MALVQRRVPH 393
S ++ GL K ++ +A + LV++ + H
Sbjct: 636 MCSTVISGLCKAHKVSEAFALYYELVEKGMQH 667
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTM 332
++ K+ M+ G+ P VT+N ++ + G MAK+++ ML + P+ + +
Sbjct: 183 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNIL 242
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
I C + + K+ + P V T + L++GL + + A+ ++ + ++ P
Sbjct: 243 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 302
Query: 393 HFSSN 397
+ S N
Sbjct: 303 NLSPN 307
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 36/296 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ M GC+ V + N+ + + S D L ++ E+ +++ D+F+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFT 230
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVK------------------------------ 218
++ +I + C G +D A + EM+ G+K
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 219 -----PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
P+VIT+ L+ F K+ + + N L+ M+ +G PN+ T+N + + R
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+AN ++ LM R PD VT+ +IKG+C +D KV+ + R L+ N Y ++
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
CQ G LA + ++ + +P V T LL+GL N + KA I +Q+
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A+ F +M G K +V + N+ ++ L ++ L ++ + I ++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNV 298
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ F + G L +A + EM G+ P++ITY TL+ + NR N + +L
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C P++ TF I+ +R K+ + + G+ + VTY+++++GFC+SG
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A++++ M+ ++P+ Y ++ LC G A + +D K + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 367 LLEGLKKNNQ-----------PCKA 380
++EG+ K + PCK
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKG 503
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I +I++ NI+I FC AY V+ ++ KLG +PD T+ TLI + + +
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV GC P++ T+N + + + A L+ M+ ++ D TY+ +I
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M + + + Y +++ LC+ G +N ++ KD + + VP+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + LL+ K + +AN +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANEL 320
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 93/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +F +IK +C + +D V + K G+ + +TY+ L+ F + + ++ L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+ + + L + + +A ++ +Q+ ++ V Y +I+G C+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A ++ ++ + + PN Y MI LC++G + A I+ + + P+ T
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 365 SALL 368
+ L+
Sbjct: 547 NTLI 550
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ G L+KA + ++QK + ++ YTT+I K + E L+
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ CKG PN+ T+ V I L K +AN L+ M+ G P++ TYN +I+ R
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 305 GHLDMAKKVYSAM 317
G L + K+ M
Sbjct: 557 GDLTASAKLIEEM 569
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N L V + L+ E+ + I +I ++N ++ +C L +A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M + PD++T+T+LI + R + G ++ + +G N T+++ +Q
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A +L M G+ PD +TY +++ G C +G L+ A +++ + ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I +C+ G A+ + K P+V T + ++ GL K +AN ++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G IK A + F +M +G V + L L ++ L KA++ F E +K +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF--EDLQKSKMD 470
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I + +I+ C+ G ++ A+ + + GVKP+V+TYT +IS K N L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 244 WNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
M G PN T+N I+ HL + + A KL+ M+ G D + +VI
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA-KLIEEMKSCGFSADASSIKMVI 585
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 7/213 (3%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD----KAYLVMVEMQKLGVKPDV 221
L I +F F I + N+ + GI+D A + EM + P +
Sbjct: 32 LCTISSFFSSCERDFS---SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSL 88
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ ++ SA + + + + G N+ T N+ I ++ A ++G
Sbjct: 89 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ + G EPD T+N +IKG G + A + M+ P+ Y ++++ +C+ GD
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+LA + + ++N V T S +++ L ++
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 118/222 (53%), Gaps = 1/222 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + NI+I +C G +A+ ++ EM G++P ++TYT+LI K NR + + L+
Sbjct: 390 DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALF 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + +G P++ FN I +A +L+ M + PDE+TYN +++G+CR
Sbjct: 450 SKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCRE 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A+++ M R + P+ Y T+I + GD A+ + + M + P++ T
Sbjct: 510 GKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTY 569
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRVPHFSSNQLSAFKSI 405
+AL++GL KN + A ++ +V + + S LS +++
Sbjct: 570 NALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ +I+ +++FNI+I C+ G L KA + M+ LGVKP+V+TY T+I + +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++ M KG P+ T+N I L + R +A+ L+ M G+ P+ VTYN +I
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C G LD A M+ + +M + Y IH L EG A M K+ +K +
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388
Query: 359 PSVDTISALLEG 370
P T + L+ G
Sbjct: 389 PDAVTHNILING 400
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++++A+CE+ ++A +++ G P++ T ++S F K NR ++ L+ M
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+L TFN+ I L + + +A + +G M+ G++P+ VTYN +I G C G
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ ++ M + L P+ Y + I LC+EG A + ++ VP+ T +AL+
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 369 EG 370
+G
Sbjct: 329 DG 330
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A M G + NA + DL A+ E+ K I +
Sbjct: 298 KEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK-GIMASL 356
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+ I A G + A ++ EM++ G+ PD +T+ LI+ + + + GL +
Sbjct: 357 VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KG P L T+ I L + R +A+ L +Q+ G+ PD + +N +I G C +G+
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ M +++P+ Y T++ C+EG A + + ++ P + +
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 367 LLEGLKK 373
L+ G K
Sbjct: 537 LISGYSK 543
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 1/209 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G K A +M G + T+ + + + VL + +K A ++ ++ +
Sbjct: 401 YCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLP- 459
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI FN +I C G +D+A+ ++ EM + V PD ITY TL+ + ++ + E L
Sbjct: 460 DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLL 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+ ++N I + A ++ M G +P +TYN +I+G C++
Sbjct: 520 DEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKN 579
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+ A+++ M+ + + P+ Y ++I
Sbjct: 580 QEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A++ F + + EK + +I + N ++ F ++ A+++ EM ++ ++ + T+
Sbjct: 164 EALECFYL-IKEKGFVP-NIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNI 221
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I+ K+ + + M G PN+ T+N I + + +A + M+ G
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+EPD TYN I G C+ G L+ A + ML L+PN Y +I C +GD + AY
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAY 341
Query: 347 IMCKDSMKKNWVPSVDTISALLEGL 371
+ + K + S+ T + + L
Sbjct: 342 AYRDEMISKGIMASLVTYNLFIHAL 366
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
+ + L+ A+ + +P + L+ KG PN+ T N + + R+ A L
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M R I T+N++I C+ G L AK+ M + PN Y T+IH C G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
F A ++ + K P T ++ + GL K + +A+ ++
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLIC 310
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 153/321 (47%), Gaps = 19/321 (5%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM----MLYG-- 126
+R + N + V L R D LL L + R GF I+ ++ G
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALL-----LGEVTRRGFTPDIVTYSTVIDGLC 266
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ A+D F +M C T + N+ + + D+ L ++ + + D+
Sbjct: 267 KAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDV 322
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ AFC+MG LD AY + +M + PDV+T+T+L+ + R E L
Sbjct: 323 ITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 382
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +GC P + T+N + + +A +L+ + G P+ VTYN+++ G CR+G
Sbjct: 383 ITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 442
Query: 307 LDMAKKVYSAMLGRRLMP---NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
D A + Y L P + +Y ++ LC++G + A ++ +++ +VP+ T
Sbjct: 443 TDQALQ-YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 501
Query: 364 ISALLEGLKKNNQPCKANTIM 384
+ ++ L K +QP +A+ ++
Sbjct: 502 FATVVFALCKAHQPQQAHELL 522
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 166/377 (44%), Gaps = 45/377 (11%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L +L RD LF A V N + + + L AR D LL KS
Sbjct: 53 LAELCDARDTTTAMALFDKMAELGAV--NHTTYYNLIHPLCKARLLDEAMGLLLDMKS-- 108
Query: 111 QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMH-------------LYGCKRTVKSLNA 155
+G G ++ +++ G +AG ++HA+ + M+ ++G + + L
Sbjct: 109 RGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGR-LRD 167
Query: 156 ALKVLTESRDLK----------AIQAFLME---------VPEKFH--IQFDIFSFNIVIK 194
A++VL E + +Q+ + V E H + + +++ ++
Sbjct: 168 AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 227
Query: 195 AFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ LD+A L++ E+ + G PD++TY+T+I K R ++ M C
Sbjct: 228 GLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA--- 284
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P T+N I +A +L+G M PD +TY ++ FC+ G LD A ++
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ +L P+ + +++ LC EG A + ++ ++ P++ T + +++G K
Sbjct: 345 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 404
Query: 374 NNQPCKANTIMALVQRR 390
+NQ KA ++A + R
Sbjct: 405 SNQVRKAEELVADFRSR 421
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A++ ++ GC T+ + N + +S ++ + + + + + + +
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP-NTVT 429
Query: 189 FNIVIKAFCEMGILDKA--YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+NI++ C G D+A YL + + V Y ++ A +D R + +
Sbjct: 430 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 489
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G P ATF + L + QA++L+ M ++G P T + V+ +CR+G
Sbjct: 490 MIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 549
Query: 307 LDMAKKVYSAM 317
+ A ++ S +
Sbjct: 550 IQKADELASEL 560
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 5/259 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLME 175
F ++ YG AG+ + ++ F M G +V + N+ L VL R A Q F E
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF-DE 225
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + + + D ++FNI+I+ FC ++D+ + EM + PDV+TY TL+ +
Sbjct: 226 MLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAG 285
Query: 236 RPEIGNGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ +I + + MV K PN+ T+ I+ K+ +A L+ M G++P+++T
Sbjct: 286 KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT 345
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
YN +I+G C + LD K++ M+G +P+ T+I C G A+ + +
Sbjct: 346 YNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 405
Query: 353 MKKNWVPSVDTISALLEGL 371
+ P T S L+ L
Sbjct: 406 SELRVQPDSATYSVLVRSL 424
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 9/267 (3%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ +M G K + N ++ L E++ L I+ L + D + N +
Sbjct: 326 EALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTL 385
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-- 250
IKA C MG L++A+ V +M +L V+PD TY+ L+ + + ++ + K
Sbjct: 386 IKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEI 445
Query: 251 -----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
GC P +A +N ++L + ++ +A ++ + + G + D +Y +I G CR G
Sbjct: 446 LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREG 504
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + ML R +P+ + Y MI L ++GD LA+ + +K + +P+
Sbjct: 505 TPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFH 564
Query: 366 ALLEGL-KKNNQPCKANTIMALVQRRV 391
++L L +K A+ + +++RR+
Sbjct: 565 SILAALVEKGCAHESASLVKLMLERRI 591
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 141/360 (39%), Gaps = 51/360 (14%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML------YGKAGMIK 132
NK + + L A++ D I+ +LE + G GFI L + G ++
Sbjct: 342 NKITYNTLIQGLCEAQKLDKIKEILEGM--VGDG---GFIPDTCTLNTLIKAHCTMGKLE 396
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI------ 186
A F M + + + ++ L + D + + F E+ EK + D+
Sbjct: 397 EAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLV 456
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N + + C G KA V ++ K G + D +Y TLI ++ PE G L L
Sbjct: 457 AAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVL 515
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + P+ T+ + I L+ K A+K + M + P ++ ++ G
Sbjct: 516 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGC 575
Query: 307 LDMAKKVYSAMLGRRLMPN--------RKIYQT------------------------MIH 334
+ + ML RR+ N R +Y++ ++
Sbjct: 576 AHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVS 635
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI-MALVQRRVPH 393
+LCQ A M S++K +D S ++ GL K ++ +A + LV++ + H
Sbjct: 636 FLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH 695
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTM 332
++ K+ M+ G+ P VT+N ++ + G MAK+++ ML + P+ + +
Sbjct: 183 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNIL 242
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
I C + + K+ + P V T + L++GL + + A+ ++ + ++ P
Sbjct: 243 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 302
Query: 393 HFSSN 397
+ S N
Sbjct: 303 NLSPN 307
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I D+F++N +I FC G A ++ EM + + PDV+TY LI+
Sbjct: 275 QNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + L++ M+ +G PN T+N I + R A + LM G P
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D T+ +I G+C + +D ++ M R L+ N Y T+IH C GD N A +
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + P + T + LL+GL N +
Sbjct: 454 QQMISSGVCPDIVTCNTLLDGLCDNGK 480
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SFNI+IK FC L A ++ KLG+ PDV+T+TTL+ ++R
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
++ M C PN+ TF + L + R +A L+ M G++P ++TY +
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G L++ +K+ ++PN IY +I LC++G + A + +
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEV---SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T ++++ G + + A ++ +++R++
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 4/242 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A+D F+ M C+ V + + L E R ++A+ A L + E +Q ++
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV-ALLDRMMED-GLQPTQITY 222
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ C+ G A ++ +M+++ + P+V+ Y+ +I + KD R L+ M
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG FP+L T+N I + R A +L+ M I PD VTYN +I F + G
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++Y ML R ++PN Y +MI C++ + A M K P V T + L+
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Query: 369 EG 370
+G
Sbjct: 403 DG 404
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 11/272 (4%)
Query: 85 DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
DTVS L R+ + + H++ + I+ K G A + F +M
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVV---------IYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + N+ + S + L E+ E+ I D+ ++N +I AF + G +
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINAFVKEGKFFE 343
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G+ P+ ITY ++I F K +R + ++ LM KGC P++ TF I
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+R +L+ M R G+ + VTYN +I GFC G L+ A + M+ + P
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+ T++ LC G A M K +M+K+
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFK-AMQKS 494
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 7/209 (3%)
Query: 175 EVPEKFHIQFD------IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
E + FH F+ + +F ++ C G + +A ++ M + G++P ITY T++
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 229 SAFYK-DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
K + N L + PN+ ++ I L R A L MQ GI
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD TYN +I GFC SG A+++ ML R++ P+ Y +I+ +EG F A
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAE 346
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + + + +P+ T +++++G K ++
Sbjct: 347 LYDEMLPRGIIPNTITYNSMIDGFCKQDR 375
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYK 233
DI + N ++ C+ G L A + MQK GV+PDV+TY LI
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + L+ M +G P+ T++ I L + R +A ++ M P+ VT
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+N +I G+C++G +D +++ M R ++ + IY T+I+ + G+ N A + ++ +
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 643
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
P TI +L G + +A ++ +Q V +
Sbjct: 644 SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGY 683
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 22/287 (7%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM----MLYG--KAGMIKHA 134
+ F + GA+R D LL +P R G + + +++G G + A
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHE---MP---RRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFL--------MEVPEKFH-IQF 184
+D M G + + N L L ++ LK A++ F ++ F+ ++
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 509
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++NI+I G +A + EM G+ PD ITY+++I K +R + ++
Sbjct: 510 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K PN+ TFN I R +L M R GI D + Y +I GF +
Sbjct: 570 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 629
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G+++ A ++ M+ + P+ + M+ + + A M +D
Sbjct: 630 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 5/193 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P V+ + L+ + RP++ L+ M K
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +FN+ I+ + + A G + + G+ PD VT+ ++ G C + A
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + M+ P+ T +++G+ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 374 NNQPCKANTIMAL 386
K +T+ AL
Sbjct: 232 -----KGDTVSAL 239
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ M+ P++ F + +V R L M+R
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++N++IK FC L A + + L P+ + T++H LC E + A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ P+V T + L+ GL + + +A +AL+ R
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDR 209
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 39/260 (15%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
++ N + L ++R L E+ + + D+ +++ VI FC+ G +D+A ++
Sbjct: 10 RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69
Query: 211 EM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
EM + G+ PDV+TYT+++ +D + + + M KG P+ TF+ I N
Sbjct: 70 EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129
Query: 270 RRSWQANKL--------------------------------------MGLMQRFGIEPDE 291
R+ +A KL M + + +PD
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
VTY +I GFC+SG+L+ A K+ M GR+ +PN Y +++H LC+ GD + A + +
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 352 SMKKNWVPSVDTISALLEGL 371
K VP+V T + L+ GL
Sbjct: 250 MTSKGCVPNVVTYTTLIHGL 269
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 3/246 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFL-MEVPEKFHIQFDIFS 188
+ A+ + ++ C+ S +A + L R + +A + F ME+ E + D+ +
Sbjct: 132 VDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVT 191
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I FC+ G L+KA ++ M+ P+V+TY++L+ K + L+ M
Sbjct: 192 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 251
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC PN+ T+ I L + A LM M D V+YN ++ G+CR G ++
Sbjct: 252 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIE 311
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISAL 367
AK+++ M + +P+R Y ++ C A + ++ + P V T S +
Sbjct: 312 EAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 371
Query: 368 LEGLKK 373
+ G +
Sbjct: 372 VAGYSR 377
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
++E +K +P + +L+G KAG + A+D F M GC
Sbjct: 214 VMEGRKCVPN-----VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC------------- 255
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
VP ++ ++ +I C +D A L+M EM
Sbjct: 256 ----------------VP-------NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPA 292
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D ++Y L+ + + R E L+ M K C P+ T+ ++ N R +A L+
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 280 GLMQR-FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M+ GI+PD VTY++V+ G+ R+ A + M+ R + PN Y ++I LC+
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 412
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
G N A + K+ K P V T + ++EGL ++ +A T++ +V +RV
Sbjct: 413 AGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I C+ G ++ A V+ + K PDV+TYT +I +R E L M
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEM 457
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V K P++ TFN I L +A KL+ M G+EP VTY +++GF R+G +
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 517
Query: 308 DMAKKVYSAMLGRR----------LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
++A +++ M RR L+P + + +I LC+ + + A + ++ +
Sbjct: 518 EIAYELFEVM--RRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSREC 574
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIM 384
P+ + A+++GL + + +A ++
Sbjct: 575 EPAEEDCLAIVDGLLRAGRTEEAGKLI 601
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + HAM+ ++ K V + ++ L + + L E+ K ++ +
Sbjct: 412 KAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK-RVEPSV 466
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN VI A C +G +D+A+ ++V M G++P ++TYTTL+ F + R EI L+ +
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526
Query: 247 MVCKG----CFPNLA---TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
M K NL F+ I+ L R +A ++ ++ EP E ++
Sbjct: 527 MRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVD 586
Query: 300 GFCRSGHLDMAKKVYSAM 317
G R+G + A K+ +++
Sbjct: 587 GLLRAGRTEEAGKLINSI 604
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 75/247 (30%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+V+ C+ + KAY V+ EM+ V PD++TY+T+I+ F K + +
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV R G+ PD VTY V+ G CR G
Sbjct: 71 MV----------------------------------TRDGMAPDVVTYTSVVDGLCRDGK 96
Query: 307 LDMA---------------KKVYSAML-----GRRLMPNRKIYQ---------------T 331
+D A K +SA++ R++ K+Y+
Sbjct: 97 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSA 156
Query: 332 MIHYLCQEGDFNLAYIMCKD-SMKKN--WVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+I LC+E AY + ++ M+++ W P V T +AL++G K+ KA ++ +++
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216
Query: 389 RR--VPH 393
R VP+
Sbjct: 217 GRKCVPN 223
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKIYQTMIHYLCQEG 340
M+ F + P+E TYN+V+ G C++ A +V M G+ + P+ Y T+I+ C++G
Sbjct: 1 MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59
Query: 341 DFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQ 376
+ + A + ++ + ++ + P V T +++++GL ++ +
Sbjct: 60 EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGK 96
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + F +M G + + N+ + L + + K + + E+ + I D+F+ N
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLN 284
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
V+ A C+ G++ +A+ V+ M GV+P+V+TY L+ N ++ +++ MV K
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C N+ ++N I + +A L M R + P+ VTYN +I G C G L A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M+ R +P+ Y+T+ YLC+ + A + K NW P + + +L+G
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464
Query: 371 L 371
+
Sbjct: 465 M 465
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K GM+ A D M G + V + NA + L D+ A++ F V +
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV-AVKVFDTMVHKD--CVA 348
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + P+ +TY TLI R + L+
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+L T+ +L R +A L+ ++ +PD Y ++ G CR+
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN Y MIH LC++G A + + K P+ T
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 365 SALLEGLKKNNQ 376
+ + G +NN+
Sbjct: 529 NLITRGFLRNNE 540
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 109/213 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I D+++ IVI + C + +D A+ + ++ KLG +PD T+TTLI + +
Sbjct: 97 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L + A +L+ M++ +P+ V ++ +
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+ + + PN Y ++IH LC+ ++ + + +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+P V T++ +++ L K +A+ ++ ++ R
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D +F +I+ C G + +A + +M G +P+V+TY TLI+ K
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M C PN+ F+ I L R+ +A + M GI P+ VTYN +I G C
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ + + M+ ++MP+ T++ LC+EG A+ + + + P+V
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316
Query: 363 TISALLEG 370
T +AL++G
Sbjct: 317 TYNALMDG 324
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E + +A+ F + E F Q ++ ++ +I C++G A ++ M++ +P+V
Sbjct: 153 EGKIGEALHLFDKMIGEGF--QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMG 280
+ ++TLI + KD + +++ M+ KG PN+ T+N I H + K W+ LM
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI-HGLCKLCEWKHVTTLMN 269
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M I PD T N V+ C+ G + A V M+ R + PN Y ++ C
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++A + + K+ V +V + + L+ G K
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 2/227 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + AM F +M + N + L L+ + E+ + I
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP- 418
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ + C+ LDKA ++ ++ PD+ YTT++ + E L+
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+N+ I L + +A+KL M + G P++ TYNL+ +GF R+
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIMCK 350
++ ML R + ++ L +G D ++ I+CK
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD+A M P + + L+++ K L M G P++ T +
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L + R A + + + G +PD T+ +I+G C G + A ++ M+G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
PN Y T+I+ LC+ G+ + A + + + N P+V S L++ L K+ Q +A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 382 TIMA 385
I +
Sbjct: 231 NIFS 234
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 109 LPQGRRE-GFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+ QG+ E G ++ ++ G K + A++ F +M G + V + ++ + L
Sbjct: 247 MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
L ++ E+ I D+F+F+ +I AF + G L +A + EM K + P ++TY+
Sbjct: 307 WSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+LI+ F +R + ++ MV K CFP++ +++ I+ +R + +L M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+ + VTY +I+G ++G DMA++++ M+ + PN Y T++ LC+ G A
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ + + P++ T + ++EG+ CKA +
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM------CKAGKV 517
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ ++ +++ +I C G A ++ +M + + PDV T++ LI AF K+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ MV + P++ T++ I R +A ++ M PD V+Y+ +
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTL 402
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
IKGFC++ +D +++ M R L+ N Y T+I L Q GD ++A + K+ +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P++ T + LL+GL KN + KA + +QR
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++++I+I FC L A V+ +M KLG +P+++T ++L++ + R L +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN TFN I L ++ +A L+ M G +PD VTY +V+ G C+ G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D+A + + M +L P IY T+I LC+ + A + K+ K P+V T S+
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 367 LLEGLKKNNQPCKANTIMA-LVQRRV 391
L+ L + A+ +++ +++R++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKI 322
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + +I + + ++ +C + +A ++ +M G +P+ +T+ TLI + N+
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV KGC P+L T+ V + L + + A L+ M++ +EP + Y +I
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C++ H+D A ++ M + + PN Y ++I LC G ++ A + D +++
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P V T SAL++ K + +A + +V+R +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ +V+ C+ G D A++++ +M++ ++P V+ YTT+I K+ +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN 277
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I PD T++ +I F
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P V
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 363 TISALLEGLKKNNQPCKANTI 383
+ S L++G CKA +
Sbjct: 398 SYSTLIKGF------CKAKRV 412
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ +IK FC+ +D+ + EM + G+ + +TYTTLI ++ ++ ++
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +QR +EP TYN++I+G C++
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ + + + P+ Y TMI C++G A + K+ + +P+
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 575 NTLIRARLRDGDREASAELI 594
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 2/206 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I I +++ +I FC LD+A + M PDV++Y+TLI F K R +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G N T+ IQ L A ++ M G+ P+ +TYN ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L+ A V+ + ++ P Y MI +C+ G + + C S+ K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGV 532
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P V + ++ G + +A+ +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 12/238 (5%)
Query: 79 NKYAFEDTVS------RLAGARRFDY-IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMI 131
+K+ F D VS A+R D +E E + G + I L+ +AG
Sbjct: 389 SKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF-QAGDC 447
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFN 190
A + F +M G + + N L L ++ L KA+ F E ++ ++ I+++N
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF--EYLQRSKMEPTIYTYN 505
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I+ C+ G ++ + + + GVKPDV+ Y T+IS F + E + L+ M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +N I+ + + +L+ M+ G D T LV G LD
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 622
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA + M+ F +M G + ++ L ++ D Q E+ +
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPP 464
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N ++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L+
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P++ +N I K +A+ L M+ G P+ YN +I+ R
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 305 GHLDMAKKVYSAM 317
G + + ++ M
Sbjct: 585 GDREASAELIKEM 597
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 35/208 (16%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + EM K P +I ++ L+SA K N+ ++ L M G N T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++G M + G EP+ VT + ++ G+C S + A + M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 322 LMPNRKIYQTMIH-----------------------------------YLCQEGDFNLAY 346
PN + T+IH LC+ GD +LA+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKN 374
I+ + P V + +++GL KN
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKN 269
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ MV FP++ F+ + + + L MQ G+ + TY+++I FC
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFC 127
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R L +A V M+ PN ++++ C + A + + P+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 363 TISALLEGLKKNNQPCKANTIMALVQRRV 391
T + L+ GL +N KA+ +AL+ R V
Sbjct: 188 TFNTLIHGLFLHN---KASEAVALIDRMV 213
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 151/300 (50%), Gaps = 7/300 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM--RIMMLYGKAGM 130
++++IE K + VSR D E +LE + + +R F + +M+ Y ++G
Sbjct: 26 HQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGT----QRSDFYVFSGLMIAYLESGF 81
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ F + + + L+ L E R K + F EV E + ++ FN
Sbjct: 82 VRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGY-PASLYFFN 140
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+++ FC+ G + A V + K G++P V+++ TLI+ + K + G L + M
Sbjct: 141 ILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHAS 200
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T+++ I L + + +AN+L M G+ P+ VT+ +I G C++ +D+A
Sbjct: 201 GAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLA 260
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++Y ML + L P+ Y T+I+ LC++G+ + + + + P + + L++G
Sbjct: 261 MEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDG 320
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G ++ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
Q D+++++I+I C+ G LD+A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNE 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ ++ ++ M+ +G P+L T+N I L K Q + L+ M G++PD+++Y
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L++A ++ + M+ + + Y +I LC+EG + A M ++ +
Sbjct: 316 TLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
P T + ++ K A+ ++ +QR P
Sbjct: 376 GLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGP 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 27/294 (9%)
Query: 8 RRFCHTA----AAAAADAIALNNIR--AVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
+RFC A + DAI +R VS N N +KL D +
Sbjct: 144 QRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLIN------------GYIKLG---DLD 188
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+ F+L K+ H + Y + ++ L + D L + L G +
Sbjct: 189 EGFRL-KSAMHASGAQPDVYTYSILINGLCKEGKLDEANELF--NEMLDNGLVPNGVTFT 245
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+++G K + AM+ + M G + + N + L + +LK + + E+
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D S+ +I C+ G L+ A + +M + ++ D + YT LIS ++ R
Sbjct: 306 -GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASD 364
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ M+ G P+ T+ + I KR S A+KL+ MQR G P VT
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + F +M G + + N+ + L + + K + + E+ + I D+F+ N
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLN 284
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
V+ A C+ G++ +A+ V+ M GV+P+V+TY L+ N ++ +++ MV K
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C N+ ++N I + +A L M R + P+ VTYN +I G C G L A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M+ R +P+ Y+T+ YLC+ + A + K NW P + + +L+G
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464
Query: 371 L 371
+
Sbjct: 465 M 465
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K GM+ A D M G + V + NA + L D+ A++ F V +
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV-AVKVFDTMVHKD--CVA 348
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + P+ +TY TLI R + L+
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+L T+ +L R +A L+ ++ +PD Y ++ G CR+
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN Y MIH LC++G A + + K P+ T
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 365 SALLEGLKKNNQ 376
+ + G +NN+
Sbjct: 529 NLITRGFLRNNE 540
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 109/213 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I D+++ IVI + C + +D A+ + ++ KLG +PD T+TTLI + +
Sbjct: 97 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L + A +L+ M++ +P+ V ++ +
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+ + + PN Y ++IH LC+ ++ + + +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+P V T++ +++ L K +A+ ++ ++ R
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D +F +I+ C G + +A + +M G +P+V+TY TLI+ K
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M C PN+ F+ I L R+ +A + M GI P+ VTYN +I G C
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ + + M+ ++MP+ T++ LC+EG A+ + + + P+V
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316
Query: 363 TISALLEG 370
T +AL++G
Sbjct: 317 TYNALMDG 324
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E + +A+ F + E F Q ++ ++ +I C++G A ++ M++ +P+V
Sbjct: 153 EGKIGEALHLFDKMIGEGF--QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMG 280
+ ++TLI + KD + +++ M+ KG PN+ T+N I H + K W+ LM
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI-HGLCKLCEWKHVTTLMN 269
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M I PD T N V+ C+ G + A V M+ R + PN Y ++ C
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++A + + K+ V +V + + L+ G K
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 2/227 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + AM F +M + N + L L+ + E+ + I
Sbjct: 360 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP- 418
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ + C+ LDKA ++ ++ PD+ YTT++ + E L+
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+N+ I L + +A+KL M + G P++ TYNL+ +GF R+
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIMCK 350
++ ML R + ++ L +G D ++ I+CK
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD+A M P + + L+++ K L M G P++ T +
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L + R A + + + G +PD T+ +I+G C G + A ++ M+G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
PN Y T+I+ LC+ G+ + A + + + N P+V S L++ L K+ Q +A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 382 TIMA 385
I +
Sbjct: 231 NIFS 234
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 120/241 (49%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V+S NA L L +R L+ A P K +I ++ S NI++K +G LD A V
Sbjct: 156 SVRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGIGDLDAALKV 215
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ EM LG+ PDV+TYTT++SA+ E L++ ++ G P++ + V I
Sbjct: 216 LDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQ 275
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
A ++M M+ ++P+EVTY++VI+ C+ A+ MLG +P+ +
Sbjct: 276 CGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTAL 335
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
++ LCQ+G AY + + KKN P S L+ L KN +A + ++
Sbjct: 336 GAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVREARNLFDELE 395
Query: 389 R 389
R
Sbjct: 396 R 396
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 38/294 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ +M G V + L D++ Q ++ + D+
Sbjct: 207 GDLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGR-RPDVTM 265
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++I +C+ G L A +M EM+ V+P+ +TY+ +I A K+ +P M+
Sbjct: 266 YTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREML 325
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE----------------- 291
G P+ A + L +S +A +L M++ + PD
Sbjct: 326 GAGYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIYWLCKNGMVR 385
Query: 292 -----------------VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+TYN +I G C + L A +V+ M+ R PN Y+ +I
Sbjct: 386 EARNLFDELERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEALIK 445
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
LC+ G N + ++ + + PS L++ L ++P +TI +++
Sbjct: 446 GLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLVDSL---SEPRHEDTIRKILE 496
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I CE L +A V +M + G +P+ +TY LI K +P G ++
Sbjct: 402 LLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEALIKGLCKTGKPNEGATVFE 461
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
MV +GC P+ F V + L R K++ +G
Sbjct: 462 EMVSRGCKPSSLLFQVLVDSLSEPRHEDTIRKILETAALYG 502
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 10/335 (2%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQ 111
K + +P F+ ++ + + + + + L A D + E KS P
Sbjct: 78 KLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPN 137
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
R GF++ GK + Y++ GC V SL L L D A++
Sbjct: 138 SRLLGFLVSSFAEKGKLHCATALLLQSYEVE--GCCMVVNSLLNTLVKLDRVED--AMKL 193
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F E +F D +FNI+I+ C +G +KA ++ M G PD++TY TLI F
Sbjct: 194 F--EEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGF 251
Query: 232 YKDNRPEIGNGLW-NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K N + N ++ ++ GC P++ T+ I + +A+ L+ M R GI P
Sbjct: 252 CKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPT 311
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
VT+N+++ G+ ++G + A+++ M+ P+ + ++I C+ G N + + +
Sbjct: 312 NVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWE 371
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+ + P+ T S L+ L K N+ KA ++
Sbjct: 372 EMNARGMFPNAFTYSILINALCKENRLLKARELLG 406
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI ++N +IK FC+ L KA + +++ G PDV+TYT++IS + K + + + L
Sbjct: 240 DIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVL 299
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ G +P TFNV + A ++ G M FG PD VT+ +I G+CR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ +++ M R + PN Y +I+ LC+E A + K+ +P
Sbjct: 360 VGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFM 419
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++G K + +A I+ ++++
Sbjct: 420 YNPVIDGFCKAGKVNEAIVIVEEMEKK 446
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 1/277 (0%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
R D ++ EH + + F + I L G G + A++ M +GC + +
Sbjct: 186 RVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCG-VGKAEKAVELLGGMSGFGCLPDIVTY 244
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
N +K +S +LK +V D+ ++ +I +C+ G + +A +++ +M
Sbjct: 245 NTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDML 304
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+LG+ P +T+ L+ + K + M+ GCFP++ TF I +
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVN 364
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
Q +L M G+ P+ TY+++I C+ L A+++ + + ++P +Y +I
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
C+ G N A ++ ++ KK P T + L+ G
Sbjct: 425 DGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIG 461
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F +N VI FC+ G +++A +++ EM+K KPD IT+T LI R +++
Sbjct: 418 FMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
MV GC P+ T + + L+ + +A L
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 136/270 (50%), Gaps = 7/270 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + R K + F E+ E
Sbjct: 67 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 126
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A LV + K G++P V++Y TL++ + + + G
Sbjct: 127 YPA-SLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 185
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + AN+L M G+ P+ VT+ +I G
Sbjct: 186 FRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDG 245
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+++ LC++GD N A+ + + K P
Sbjct: 246 HCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPD 305
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRR 390
T + L++G CK + A + R
Sbjct: 306 KFTYTTLIDGC------CKEGDLDAAFEHR 329
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 133 FFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 190
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 191 AMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNG 250
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+J T+N + L K QA+ L+ M G++PD+ TY
Sbjct: 251 RVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYT 310
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 311 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSV 370
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 371 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 404
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DL + E+ K ++ D
Sbjct: 248 KNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXK-GLKPDK 306
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 307 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLRE 366
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 367 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 144/321 (44%), Gaps = 41/321 (12%)
Query: 106 QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESR 164
++ +P+G R+ +M+ Y +AG ++ AM M GC + N A+ VL R
Sbjct: 154 RRGMPRGTRQ--FAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGR 211
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
KA++ E + + D+ ++N +IK C + A ++ M + G PD I+Y
Sbjct: 212 IDKALE--FAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISY 269
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV----------------N 268
T++S K+ R L M G FP+ T+N+ I L
Sbjct: 270 FTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEG 329
Query: 269 KR-------------------RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KR R +A +++G M G PD VTY+ V+ GFCR G LD
Sbjct: 330 KRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQ 389
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+K+ M PN + +++ LC+ G + A+ + S ++ W PS T S ++
Sbjct: 390 ARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMH 449
Query: 370 GLKKNNQPCKA-NTIMALVQR 389
G ++ + ++ + +M ++Q+
Sbjct: 450 GFRREGKLKESCDVVMQMLQK 470
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+FL E E + D ++ + +FC G + +A ++ EM G +PDV+TY+ ++
Sbjct: 322 SFLRE-SEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDG 380
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
F + + + M GC PN T + L +S +A +L+ + P
Sbjct: 381 FCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPS 440
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+TY++V+ GF R G L + V ML + P +IH LC E
Sbjct: 441 AITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNE 489
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 81/226 (35%), Gaps = 70/226 (30%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ V+ FC +G LD+A +M M K G KP+ +T+T L++ K + L
Sbjct: 370 DVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELL 429
Query: 245 N-----------------------------------LMVCKGCFPNLATFNVRIQHLVNK 269
N M+ KG FP N+ I L N+
Sbjct: 430 NKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNE 489
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL--------DM------------ 309
R+ A M Q G + V + VI GF R G L DM
Sbjct: 490 RKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTY 549
Query: 310 ---------------AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A + ML R L P Y+T+IH C++G
Sbjct: 550 TVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKG 595
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 91/256 (35%), Gaps = 38/256 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G + A M+ GCK + A L L + L + E++
Sbjct: 381 FCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPS 440
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I ++++V+ F G L ++ V+++M + G P + LI A + +P
Sbjct: 441 AI-TYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFM 499
Query: 245 NLMVCKGCFPNLATFNVRIQ------------------HLVN-----------------K 269
KGCF N+ F I +L N K
Sbjct: 500 EQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRK 559
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ +A L+ M G+ P VTY VI +C G ++ + ML + + Y
Sbjct: 560 GKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS--AY 617
Query: 330 QTMIHYLCQEGDFNLA 345
+I LC G + A
Sbjct: 618 NQVIEKLCAFGKLSEA 633
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V + N+ + + S D L ++ E+ +++ D+F+++ +I + C G +D
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDA 246
Query: 205 AYLVMVEMQKLGVK-----------------------------------PDVITYTTLIS 229
A + EM+ G+K P+VIT+ L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K+ + + N L+ M+ +G PN+ T+N + + R +AN ++ LM R P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D VT+ +IKG+C +D KV+ + R L+ N Y ++ CQ G LA +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + +P V T LL+GL N + KA I +Q+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A+ F +M G K +V + N+ ++ L ++ L ++ + I ++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNV 298
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ F + G L +A + EM G+ P++ITY TL+ + NR N + +L
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C P++ TF I+ +R K+ + + G+ + VTY+++++GFC+SG
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A++++ M+ ++P+ Y ++ LC G A + +D K + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 367 LLEGLKKNNQ-----------PCKA 380
++EG+ K + PCK
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKG 503
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I +I++ NI+I FC AY V+ ++ KLG +PD T+ TLI + + +
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV GC P++ T+N + + + A L+ M+ ++ D TY+ +I
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M + + + Y +++ LC+ G +N ++ KD + + VP+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + LL+ K + +AN +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANEL 320
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 93/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +F +IK +C + +D V + K G+ + +TY+ L+ F + + ++ L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+ + + L + + +A ++ +Q+ ++ V Y +I+G C+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A ++ ++ + + PN Y MI LC++G + A I+ + + P+ T
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 365 SALL 368
+ L+
Sbjct: 547 NTLI 550
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N L V + L+ E+ + I +I ++N ++ +C L +A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M + PD++T+T+LI + R + G ++ + +G N T+++ +Q
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A +L M G+ PD +TY +++ G C +G L+ A +++ + ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I +C+ G A+ + K P+V T + ++ GL K +AN ++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ G L+KA + ++QK + ++ YTT+I K + E L+
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ CKG PN+ T+ V I L K +AN L+ M+ G P++ TYN +I+ R
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 305 GHLDMAKKVYSAM 317
G L + K+ M
Sbjct: 557 GDLTASAKLIEEM 569
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G IK A + F +M +G V + L L ++ L KA++ F E +K +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF--EDLQKSKMD 470
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I + +I+ C+ G ++ A+ + + GVKP+V+TYT +IS K N L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 244 WNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M G PN T+N I+ HL + + A KL+ M+ G D + +VI
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA-KLIEEMKSCGFSADASSIKMVIDML- 588
Query: 303 RSGHLD 308
SG LD
Sbjct: 589 LSGELD 594
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%)
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A + EM + P ++ ++ SA + + + + G N+ T N+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I ++ A ++G + + G EPD T+N +IKG G + A + M+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
P+ Y ++++ +C+ GD +LA + + ++N V T S +++ L ++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
Y G + A+ DM G TV + N + L D +A A+ ++E ++ +
Sbjct: 229 YCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALF--MDGRASDAYAVLEEMQRNGLS 286
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F++NI+I +C+ G KA V EM + GV+ +TYT+LI AF + + + + L
Sbjct: 287 PDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRL 346
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ + V KG P++ +N I +A ++M M++ I PD+VTYN +I+GFC
Sbjct: 347 FKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCL 406
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD A+ + M R + P+ LC+ G + A + K+ + K P T
Sbjct: 407 LGRLDEARGLIDEMTKRGIQPDLG--------LCKNGQGDDAENLMKEMVGKGITPDDST 458
Query: 364 ISALLEGLKKNNQ 376
+L+EGL ++
Sbjct: 459 YISLIEGLTTVDE 471
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITY 224
++A + E+ E+ I D +++ +I +C++G ++ A V EM G V P + Y
Sbjct: 163 VQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMY 222
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
LI + + ++ MV +G +AT+N+ + L R+ A ++ MQR
Sbjct: 223 NALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQR 282
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD TYN++I G+C+ G+ A +V+ M + + Y ++I+ ++G
Sbjct: 283 NGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQE 342
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRVP 392
+ K ++KK P V +AL+ +A IMA + ++R+P
Sbjct: 343 TDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIP 391
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ + ++N+++ A G AY V+ EMQ+ G+ PDV TY LI+ + K+ +
Sbjct: 250 VAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKAL 309
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M KG T+ I K + + ++L + + GI PD V YN +I
Sbjct: 310 EVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSH 369
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G ++ A ++ + M +R+ P+ Y T+I C G + A + + K+ P +
Sbjct: 370 CAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL 429
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
GL KN Q A +M
Sbjct: 430 --------GLCKNGQGDDAENLM 444
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
TFN+ ++HL + +A +L+ M R P+ VTYN VI GFC G + A +V M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 318 LGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
R + P++ Y T+I C+ G A + + + + V PS +AL+ G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGG 228
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 2/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I A++ F +M G K + A ++ +++ E+ E D
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA-GCSPDA 521
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +I + G LD+A V+ +M++ G PD++++ LI+ F + N+ + +
Sbjct: 522 IVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKE 581
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P+ T+N I H A++LM M + G+ P VTY +I +C +G+
Sbjct: 582 MENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN 641
Query: 307 LDMAKKVYSAMLG-RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A K++ M ++ PN IY +I+ LC++ +LA + D K P+ +T +
Sbjct: 642 LDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFN 701
Query: 366 ALLEGLKKNNQPCKANTIM 384
A+ +GL++ N KA +M
Sbjct: 702 AMFKGLQEKNWLSKAFELM 720
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 3/287 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA MI+ A + F M+ G V +LN + + + + F E+ K ++
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK-GLKG 484
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++ +I+AFC + ++KA + EM + G PD I Y TLIS + + + + +
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P++ +FNV I K + +A +++ M+ GI+PD VTYN +I F ++
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ++ M+ L+P Y +IH C G+ + A + +D + VP I
Sbjct: 605 GDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVI 664
Query: 365 -SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA-FKSILSKS 409
+ L+ L + NQ A ++M ++ + ++N +A FK + K+
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G A D + + G S NA L L +R+ K + L E+ E IQ ++
Sbjct: 282 RSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKE-MDIQPNV 340
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQK-----LGVKPDVITYTTLISAFYKDNRPEIGN 241
+F I+I C+ +D+A V +M V+PDVITY TLI K R E G
Sbjct: 341 VTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGL 400
Query: 242 GLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL M + C PN T+N I A +L M + G+ P+ VT N ++ G
Sbjct: 401 GLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDG 460
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G ++ A + ++ M G+ L N Y +I C + A + + ++ P
Sbjct: 461 MCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPD 520
Query: 361 VDTISALLEGLKKNNQPCKANTIMA 385
L+ GL + + +A+ +++
Sbjct: 521 AIVYYTLISGLSQAGKLDRASFVLS 545
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ AM+ F +M GC + L+++ L +F++ ++ DI SFN
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDR-ASFVLSKMKEAGFSPDIVSFN 560
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I FC LD+AY ++ EM+ G+KPD +TY TLIS F K + L MV +
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE 620
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDM 309
G P + T+ I +A K+ M + P+ V YN++I CR +D+
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + M + + PN + M L ++ + A+ + + P T+ L E
Sbjct: 681 ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTE 740
Query: 370 GLKKNNQPCK 379
L + K
Sbjct: 741 WLSAVGETAK 750
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 35/219 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV----------------------- 221
+ ++N +I +C+ +++ A + +M K GV P+V
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474
Query: 222 ------------ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+TYT LI AF N E L++ M+ GC P+ + I L
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ +A+ ++ M+ G PD V++N++I GFCR LD A ++ M + P+ Y
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
T+I + + GDF+ A+ + K +K+ VP+V T AL+
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 3/245 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+G I+ A M GC + +L++ +K A+ + ++ F +Q ++
Sbjct: 293 SGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMW-NQMIRGFGLQPNV 351
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +++ FC G +DKA V + M+++G P++ TY +LI+ F K E +WN
Sbjct: 352 VAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNK 411
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC PN+ + ++ L + +A L+ +M + P T+N IKG C +G
Sbjct: 412 MLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 471
Query: 307 LDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A+KV+ M + R PN Y ++ L + AY + ++ + S T +
Sbjct: 472 LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN 531
Query: 366 ALLEG 370
LL G
Sbjct: 532 TLLHG 536
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 183/421 (43%), Gaps = 72/421 (17%)
Query: 47 EPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQ 106
E L +L+ E FK+ A++ + FE + +LA + D +++LL+
Sbjct: 42 ESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM 101
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
K E + ++ +Y + G+ + A++ FY + +GC +VK N L L +
Sbjct: 102 KLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRI 161
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ I ++ ++ + ++F++N+++KA C+ +D A ++VEM G P+ ++YTT
Sbjct: 162 QMIYMVYRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTT 220
Query: 227 LISA-----FYKDNR-------PEI------------------GNGLWNLMVCKGCFPNL 256
+IS+ K+ R P + G L + MV KG PN+
Sbjct: 221 VISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNV 280
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQR-------------------------------- 284
+++ I L N + A L+ M +
Sbjct: 281 ISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQ 340
Query: 285 ----FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
FG++P+ V YN +++GFC G++D A V+ M PN + Y ++I+ + G
Sbjct: 341 MIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRG 400
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR-----VPHFS 395
A + + P+V ++++E L ++++ +A +++ ++ + VP F+
Sbjct: 401 SLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 460
Query: 396 S 396
+
Sbjct: 461 A 461
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVP-EKFHIQFDIFSFNIVIKAFCEMGILDKA 205
K T + ++ L + ++Q L ++ + FH D+F VI + ++G+ ++A
Sbjct: 72 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERA 129
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +++ G P V Y ++ +NR ++ ++ M G PN+ T+NV ++
Sbjct: 130 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 189
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A KL+ M G P+ V+Y VI C G + ++ L R P
Sbjct: 190 LCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQ-----LAERFEPV 244
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+Y +I+ LC+E D+ + + ++K P+V + S L+ L + Q A +++A
Sbjct: 245 VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLA 304
Query: 386 LVQRRVPHFSSNQLSAF 402
+ +R H + + LS+
Sbjct: 305 QMLKRGCHPNIHTLSSL 321
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G ++ A+ + M GC V + ++ L K ++ L+E+ K +
Sbjct: 396 FTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAES-LIEIMSKENCAP 454
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +FN IK C+ G LD A V +M Q+ P+++TY L+ K NR E GL
Sbjct: 455 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGL 514
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ +G + +T+N + N A +L+G M G PDE+T N++I +C+
Sbjct: 515 TREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCK 574
Query: 304 SGHLDMAKKVYSAM-LGRR-LMPNRKIYQTMIHYLCQ 338
G + A ++ + GRR P+ Y +I LC+
Sbjct: 575 QGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCR 611
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + F +M G K + + N+ + L+ + L A L + ++ +I +FN +I
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIA-LWDKMVGLGLKPNIVTFNALI 350
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC+ ++ +A + ++ + + P+ IT+ T+I AF K E G L N M+ +G F
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN++T+N I L + A KL+ M+ + ++ D VTYN++I G+C+ G A+K+
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
ML + PN Y T++ C EG+ A + K+ +V T + L++G K
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530
Query: 374 NNQPCKANTIM 384
+ AN ++
Sbjct: 531 TGKLEDANRLL 541
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 4/246 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A + F + YG K ++ S N L L + + +Q E+ ++ IQ ++ +FN
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR-RIQPNLTTFN 204
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI---GNGLWNLM 247
I I C+ G L+KA V+ +++ G P+++TY TLI K + + M
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ PN TFN I A MQR G++P+ VTYN +I G +G L
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A ++ M+G L PN + +I+ C++ A + D +++ VP+ T + +
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384
Query: 368 LEGLKK 373
++ K
Sbjct: 385 IDAFCK 390
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
Query: 100 EHLLEHQKSLPQGRREGFIMRIM----MLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSL 153
E++L + + + +R+G I+ ++ G + G + A+ + M G K + +
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA + + + +K + ++ E+ + + +FN +I AFC+ G++++ + + M
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVP-NAITFNTMIDAFCKAGMMEEGFALHNSML 405
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
G+ P+V TY LI+ ++ L N M ++ T+N+ I
Sbjct: 406 DEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A KL+G M G++P+ VTYN ++ G+C G+L A KV + M N Y +I
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLI 525
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL-LEGLKKNNQP 377
C+ G A + + ++K P+ T + LE L+K P
Sbjct: 526 KGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIP 570
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N+ I + CE V +Q G K + + L+SA K N ++ M+
Sbjct: 143 NLEIHSACE---------VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIK 193
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+ PNL TFN+ I L + +A ++ ++ +G P+ VTYN +I G C+ G
Sbjct: 194 RRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS--- 250
Query: 310 AKKVYSA------MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
A K+Y A ML ++ PN + T+I C++ + A ++ ++ P++ T
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310
Query: 364 ISALLEGLKKNNQ 376
++L+ GL N +
Sbjct: 311 YNSLINGLSNNGK 323
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + F +M G + + N+ + L + + K + + E+ + I D+F+ N
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLN 224
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
V+ A C+ G++ +A+ V+ M GV+P+V+TY L+ N ++ +++ MV K
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C N+ ++N I + +A L M R + P+ VTYN +I G C G L A
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M+ R +P+ Y+T+ YLC+ + A + K NW P + + +L+G
Sbjct: 345 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404
Query: 371 L 371
+
Sbjct: 405 M 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K GM+ A D M G + V + NA + L D+ A++ F V +
Sbjct: 232 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV-AVKVFDTMVHKD--CVA 288
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + P+ +TY TLI R + L+
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+L T+ +L R +A L+ ++ +PD Y ++ G CR+
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN Y MIH LC++G A + + K P+ T
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468
Query: 365 SALLEGLKKNNQ 376
+ + G +NN+
Sbjct: 469 NLITRGFLRNNE 480
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 86/156 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+NI+I +C++ +DKA ++ +M G+ D +TY TLI R + L+
Sbjct: 777 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 836
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV G P+L T+ + + +L +A L+ ++ ++ D + YN+ I G CR+
Sbjct: 837 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 896
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G L+ A+ ++S + + L P+ + Y MIH LC+ G
Sbjct: 897 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 932
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I D+++ IVI + C + +D A+ + ++ KLG +PD T+TTLI + +
Sbjct: 72 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L R+ +A + M GI P+ VTYN +
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C+ + + M+ ++MP+ T++ LC+EG A+ + + +
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251
Query: 358 VPSVDTISALLEG 370
P+V T +AL++G
Sbjct: 252 EPNVVTYNALMDG 264
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + + N+ + L + K + L E+ I ++ F+ V+ A C+ G++
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAI 726
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ V+ M K GV+PDV+TYT L+ + + +++ MV KGC PN+ ++N+ I
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+R +A L+ M G+ D VTYN +I G C G L A ++ M+ +P
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ Y+ ++ YLC+ A ++ K
Sbjct: 847 DLVTYRILLDYLCKNHHLAEAMVLLK 872
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF----YK 233
+ F I D+++ NI+I +FC + L A+ V+ ++ KLG +PDV+TY TL++ K
Sbjct: 608 DSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITK 667
Query: 234 DNRPEI------------------GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
P+I L N MV PN+ F+ + L + A
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+ ++ +M + G+EPD VTY ++ G C +D A KV+ M+ + +PN + Y +I+
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
CQ + A + + + + T + L+ GL
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 101/207 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I DIF++N +I A C + ++ EM + P+V+ ++T++ A K+ I +
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ ++M+ +G P++ T+ + + +A K+ M G P+ +YN++I G+
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ +D A + M + L+ + Y T+IH LC G A + + + +P +
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQ 388
T LL+ L KN+ +A ++ ++
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIE 875
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 7/286 (2%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
L HQ P ++R + + GK G A+ F M G + V + + L +
Sbjct: 109 LGHQ---PDATTFTTLIRGLCVEGKIG---EALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
R + E+ K I +I ++N +I C++ +M EM + PDV
Sbjct: 163 DRQVTEAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T T++ A K+ + + ++M+ +G PN+ T+N + + A K+ M
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ ++YN +I G+C+ +D A ++ M + L PN Y T+IH LC G
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
A + + + + +P + T L + L KN KA ++ ++
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 2/229 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + AM F +M + N + L L+ + E+ + I
Sbjct: 300 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP- 358
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ + C+ LDKA ++ ++ PD+ YTT++ + E L+
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 418
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+N+ I L + +A+KL M + G P++ TYNL+ +GF R+
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIMCKDS 352
++ ML R + ++ L +G D ++ I+CK S
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPS 527
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD+A M P + + L+++ K L M G P++ T +
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L + R A + + + G +PD T+ +I+G C G + A ++ M+G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
PN Y T+I+ LC++ A+ + + + K P++ T ++L+ GL K
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 197
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M+ K P+ FN + + + L M FGI PD T +VI C
Sbjct: 33 FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 92
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+D A + +L P+ + T+I LC EG A + + + + P+V T
Sbjct: 93 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 152
Query: 364 ISALLEGLKKNNQPCKANTIMA 385
L+ GL K+ Q +A I +
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFS 174
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M FGI PD T N++I FC L A V + +L P+ Y T+++ LC+
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK 663
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 51/298 (17%)
Query: 118 IMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
++ + ML G K G IK A D F M + G V S N L + A + L+
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML-------NGYATKGCLV 379
Query: 175 EVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ + F + D ++FN++IKA+ G+LDKA ++ EM+ GVKPDV+TY T+I
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 439
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ------------------------ 264
+A + + + +N M+ +G P+ +N IQ
Sbjct: 440 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Query: 265 -----------HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+L R A + L G+ PD V YN+++ G+C G ++ A +V
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ AM+ + PN Y T+++ C+ G + + ++ +++ PS S +++GL
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + + N+ + L ++R + +AFL ++ K + +
Sbjct: 234 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK-RVLPNN 292
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+T + L+ + K + + +++
Sbjct: 293 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 352
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ ++N+ + K L LM GI PD T+N++IK + G
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + P+ Y+T+I LC+ G + A + + P +
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L++G + KA +++ + H + F SI++
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHL---DIVFFSSIIN 510
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKR---TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
Y GM+ AM F +M +G K T +++ AAL + + D A++ F + +
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD--AMEKFNQMIDQG-- 462
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D +++N +I+ FC G L KA ++ E+ G+ D++ ++++I+ K R
Sbjct: 463 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 522
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++L V G P+ +N+ + + +A ++ M GIEP+ V Y ++ G+
Sbjct: 523 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G +D ++ ML R + P+ +Y +I L + G A + + + +
Sbjct: 583 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDI 642
Query: 362 DTISALLEGLKKN 374
T + +L GL KN
Sbjct: 643 CTYNIVLRGLFKN 655
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ +I N +++ FCE D+A +++ +LG PDV +Y+ L+ + +
Sbjct: 145 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 204
Query: 241 NGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L +M G C PN+ +N I + +A L M + GI PD VTYN V+
Sbjct: 205 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 264
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ +D A+ M+ +R++PN Y +I+ G + A + K+ + + +
Sbjct: 265 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 324
Query: 359 PSVDTISALLEGLKKNNQPCKANTI---MALVQRRVPHFSSN 397
P V T+S L+ L K + +A + MA+ + FS N
Sbjct: 325 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV--KPDV 221
R +A+ L PE + D+FS++I++K+ C+ G +A ++ M + G P+V
Sbjct: 164 RTDEALDILLHRTPELGCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNV 222
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y T+I F+K+ L+ MV +G P+L T+N + L R +A +
Sbjct: 223 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 282
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M + P+ TYN +I G+ +G A +V+ M ++P+ ++ LC+ G
Sbjct: 283 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 342
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEG 370
A + K P V + + +L G
Sbjct: 343 IKEARDVFDTMAMKGQNPDVFSYNIMLNG 371
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + ++ +C++G +D+ + EM + G+KP I Y+ +I ++ R
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G ++ T+N+ ++ L R +A L ++ ++ + +T N +I G
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++ ++ AK +++++ RL+P+ Y MI L +EG A M P+
Sbjct: 688 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 747
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
++ ++ L K N+ +A ++ + R +FS L+A
Sbjct: 748 RLLNHVVRELLKKNEIVRAGAYLSKIDER--NFSLEHLTA 785
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +N+++ +C +G ++KA V M G++P+V+ Y TL++ + K R + G L+
Sbjct: 536 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 595
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P+ +++ I L R+ A M GI D TYN+V++G ++
Sbjct: 596 REMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKN 655
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A ++ + + N TMI + Q A + + VPSV T
Sbjct: 656 RCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTY 715
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQ 398
S ++ L K LV+ FSS Q
Sbjct: 716 SIMITNLIKE----------GLVEEAEDMFSSMQ 739
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI-QFDIFSFNIVIKAFCEMGILD 203
GC V S + LK L + L + E + ++ ++N VI F + G ++
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD++TY +++ A K + MV K PN T+N I
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD VT ++++ C+ G + A+ V+ M +
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359
Query: 324 PNRKIYQTMIHYLCQEG 340
P+ Y M++ +G
Sbjct: 360 PDVFSYNIMLNGYATKG 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLW----------NLMV--------CK-------- 250
+ P TY L+ + +RPE+ + N+++ C+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 251 ----------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG--IEPDEVTYNLVI 298
GC P++ ++++ ++ L ++ +S QA+ L+ +M G P+ V YN VI
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GF + G ++ A ++ M+ R + P+ Y +++H LC+ + A + + K +
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289
Query: 359 PSVDTISALLEGLKKNNQ 376
P+ T + L+ G Q
Sbjct: 290 PNNWTYNNLIYGYSSTGQ 307
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + AM+ F M G + N ++ L + + E+ + DI
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN-GMHLDI 502
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+ +I C++G + A + +G+ PD + Y L+ + + E +++
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G PN+ + + R + L M + GI+P + Y+++I G +G
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
AK + M + + Y ++ L + F+ A + K+ N ++ T++
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+++G+ + + +A + A + R
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISR 705
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK ++F A I N + V+ R D E L ++ L +G + I+
Sbjct: 554 EKALRVFDAMVSAGIE-PNVVGYGTLVNGYCKIGRID--EGLSLFREMLQRGIKPSTILY 610
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
+++ G +AG A F++M G + + N L+ L ++R FL +
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDE-AIFLFKELR 669
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+++ +I + N +I + +++A + + + + P V+TY+ +I+ K+ E
Sbjct: 670 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 729
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M GC PN N ++ L+ K +A + + + +T L++
Sbjct: 730 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 789
Query: 299 -----KGFCR 303
KG CR
Sbjct: 790 DLFSSKGTCR 799
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 16/310 (5%)
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
K Q FK+ ++ +F+ + R + + L++ ++ G I
Sbjct: 83 KALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAII 142
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
Y AG A+ F+ MH +GC + + S N L VL +S+ ++ L +V
Sbjct: 143 TERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKV----- 197
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ F G L +A+ ++M+K + DV+TYTT++ F
Sbjct: 198 -----------FRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQ 246
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M+ +G P++AT+N IQ L K A + M R G P+ TYN+VI+G
Sbjct: 247 RVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGL 306
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G ++ A + + M PN +IY +I Y C + + + + +P++
Sbjct: 307 CHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNL 366
Query: 362 DTISALLEGL 371
DT + L+ +
Sbjct: 367 DTYNILISAM 376
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G AG ++ A F +M G +V + NA ++VL + +++ + E+ K ++
Sbjct: 236 FGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMP- 294
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N+VI+ C +G ++KA M M+ +P+V Y +I F E G ++
Sbjct: 295 NSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVF 354
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C PNL T+N+ I + +++S + + ++ +V +GFC+
Sbjct: 355 EKMGDADCLPNLDTYNILISAMFVRKKS-----------DYLLTAGKLLIEMVERGFCK 402
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ M YGC+ V + N L+ + + + FL E+ K +
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPSV 352
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I C G++ +A V+ +M + G P+ ++Y L+ A KD + E ++
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC+P++ T+N + L + A +++ + G P +TYN VI G + G
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A K+ M G+ L P+ Y T++ L +EG + A D + P+ T ++
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
++ GL K Q +A +A + R
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVAR 556
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I A+ M + V + N L+ L +S LK L ++
Sbjct: 190 YCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR-ECYP 245
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I+A C+ + +A ++ EM+ G KPDV+TY LI+ K+ R +
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M GC PN+ T N+ ++ + + R A K + M R G P VT+N++I CR
Sbjct: 306 NHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRK 365
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V M PN Y ++H LC++ A + + P + T
Sbjct: 366 GLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTY 425
Query: 365 SALLEGLKKNNQ 376
+ LL L K+ +
Sbjct: 426 NTLLTALCKDGK 437
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ E D+ ++N++I +C+ G + A + + ++ V PDV+TY T++
Sbjct: 167 VMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLC 223
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + + + + + C+P++ T+ + I+ + QA KL+ M+ G +PD V
Sbjct: 224 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV 283
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN++I G C+ G LD A + + M PN + ++ +C G + A +
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM 343
Query: 353 MKKNWVPSVDTISALL 368
++K PSV T + L+
Sbjct: 344 IRKGCSPSVVTFNILI 359
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G+I A+D M +GC S N L L + + + +AI+ + V + D
Sbjct: 364 RKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP--D 421
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N ++ A C+ G +D A ++ ++ G P +ITY T+I K + + L +
Sbjct: 422 IVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLD 481
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG P++ T++ + L + + +A ++ G++P+ +TYN ++ G C++
Sbjct: 482 EMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKAR 541
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A + M+ R P Y +I L EG
Sbjct: 542 QTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L++ + + +M G PD+I T+LI K + + ++ G P++ T+
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
NV I ++ + + L+ R + PD VTYN +++ C SG L A +V +
Sbjct: 184 NVLISGYC---KTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
R P+ Y +I C+E A + + K P V T + L+ G+ K +
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + + N L L + + L ++ K + ++N VI ++G D
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK-GCSPVLITYNTVIDGLSKVGKTDD 475
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ EM+ G+KPD+ITY+TL+ ++ + + ++ + G PN T+N +
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIML 535
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L R++ +A + M G +P E +Y ++I+G G A ++ + + R ++
Sbjct: 536 GLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVK 595
Query: 325 NRKIYQTMI 333
Q ++
Sbjct: 596 KSSAEQVVV 604
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 51/298 (17%)
Query: 118 IMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
++ + ML G K G IK A D F M + G V S N L + A + L+
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML-------NGYATKGCLV 389
Query: 175 EVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ + F + D ++FN++IKA+ G+LDKA ++ EM+ GVKPDV+TY T+I
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 449
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ------------------------ 264
+A + + + +N M+ +G P+ +N IQ
Sbjct: 450 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509
Query: 265 -----------HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+L R A + L G+ PD V Y++++ G+C G ++ A +V
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ AM+ + PN +Y T+++ C+ G + + ++ +++ PS S +++GL
Sbjct: 570 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + + N+ + L ++R + +AFL ++ K + +
Sbjct: 244 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK-RVLPNN 302
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+T + L+ + K + + +++
Sbjct: 303 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 362
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ ++N+ + K L LM GI PD T+N++IK + G
Sbjct: 363 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + P+ Y+T+I LC+ G + A + + P +
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L++G + KA +++ + H + F SI++
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHL---DIVFFSSIIN 520
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ +I N +++ FCE D+A +++ +LG PDV +Y+ L+ + +
Sbjct: 155 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 214
Query: 241 NGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L +M G C PN+ +N I + +A L M + GI PD VTYN V+
Sbjct: 215 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 274
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ +D A+ M+ +R++PN Y +I+ G + A + K+ + + +
Sbjct: 275 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 334
Query: 359 PSVDTISALLEGLKK 373
P V T+S L+ L K
Sbjct: 335 PDVVTLSMLMGSLCK 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKR---TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
Y GM+ AM F +M +G K T +++ AAL + + D A++ F + +
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD--AMEKFNQMIDQG-- 472
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D +++N +I+ FC G L KA ++ E+ G+ D++ ++++I+ K R
Sbjct: 473 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 532
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++L V G P+ +++ + + +A ++ M GIEP+ V Y ++ G+
Sbjct: 533 NIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 592
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G +D ++ ML R + P+ +Y +I L Q G A + + + +
Sbjct: 593 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDI 652
Query: 362 DTISALLEGLKKN 374
T + +L GL KN
Sbjct: 653 CTYNIVLRGLFKN 665
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV--KPDV 221
R +A+ L PE + D+FS++I++K+ C+ G +A ++ M + G P+V
Sbjct: 174 RTDEALDILLHRTPELGCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNV 232
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y T+I F+K+ L+ MV +G P+L T+N + L R +A +
Sbjct: 233 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 292
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M + P+ TYN +I G+ +G A +V+ M ++P+ ++ LC+ G
Sbjct: 293 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 352
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEG 370
A + K P V + + +L G
Sbjct: 353 IKEARDVFDTMAMKGQNPDVFSYNIMLNG 381
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + ++ +C++G +D+ + EM + G+KP I Y+ +I ++ R
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G ++ T+N+ ++ L R +A L ++ ++ + +T N +I G
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++ ++ AK +++++ RL+PN Y MI L +EG A M P+
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
++ ++ L K N+ +A ++ + R +FS L+A
Sbjct: 758 RLLNHVVRELLKKNEIVRAGAYLSKIDER--NFSLEHLTA 795
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI-QFDIFSFNIVIKAFCEMGILD 203
GC V S + LK L + L + E + ++ ++N VI F + G ++
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD++TY +++ A K + MV K PN T+N I
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD VT ++++ C+ G + A+ V+ M +
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369
Query: 324 PNRKIYQTMIHYLCQEG 340
P+ Y M++ +G
Sbjct: 370 PDVFSYNIMLNGYATKG 386
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLW----------NLMV--------CK-------- 250
+ P TY L+ + +RPE+ + N+++ C+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 251 ----------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG--IEPDEVTYNLVI 298
GC P++ ++++ ++ L ++ +S QA+ L+ +M G P+ V YN VI
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GF + G ++ A ++ M+ R + P+ Y +++H LC+ + A + + K +
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299
Query: 359 PSVDTISALLEGLKKNNQ 376
P+ T + L+ G Q
Sbjct: 300 PNNWTYNNLIYGYSSTGQ 317
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 8/211 (3%)
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E L ++ L +G + I+ +++ G +AG A F++M G + + N L
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
+ L ++R FL + +++ +I + N +I + +++A + + + +
Sbjct: 660 RGLFKNRCFDE-AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 718
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P+V+TY+ +I+ K+ E +++ M GC PN N ++ L+ K +A
Sbjct: 719 VPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 778
Query: 278 LMGLMQRFGIEPDEVTYNLVI-----KGFCR 303
+ + + +T L++ KG CR
Sbjct: 779 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 809
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +++ ++ + C+ G++ +A + M G++PD++ Y +LI R + L
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ KG PN+ TFNV + + +A +MG M G+EPD VTYN VI G C
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A KV+ M+ + +PN Y ++IH C+ + N A + + + P V T S
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPH 393
L+ G K +P A + + H
Sbjct: 392 TLIGGFCKAGKPEAAKELFCTMHEHDQH 419
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK---VLTESRDLKAIQAFLMEVPEKFH 181
+ K GMI A M G + V + N+ + +L++ D A++ F + + + F
Sbjct: 292 FCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGD--AVKVFELMIHKGF- 348
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ +++ +I +C+ ++KA ++ EM G+ PDV+T++TLI F K +PE
Sbjct: 349 -LPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAK 407
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M PNL T + + L + +A L M++ +E + V YN+V+ G
Sbjct: 408 ELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGM 467
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G L+ A++++S + + + + Y TMI LC+EG + A + + +P+
Sbjct: 468 CSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNE 527
Query: 362 DTISALLEGL 371
T + + GL
Sbjct: 528 FTYNVFVRGL 537
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
IQ D+ ++N +I C G +A ++ M + G+ P+V T+ L+ F KD
Sbjct: 243 IQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAK 302
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ MV G P++ T+N I + A K+ LM G P+ VTY+ +I G+
Sbjct: 303 TIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGW 362
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ +++ A + M+ L P+ + T+I C+ G A + + + P++
Sbjct: 363 CKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNL 422
Query: 362 DTISALLEGLKK 373
T + +L+GL K
Sbjct: 423 QTCAIILDGLFK 434
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
LG+KPDV T T +I+ N G + +M G P + TF I L +
Sbjct: 99 SLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVA 158
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG-----------------HLDM------- 309
+A + ++ G + + TY +I G C++G LD+
Sbjct: 159 RAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTI 218
Query: 310 ------------AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
A ++S M + + P+ Y ++IH LC G + A + + M+K
Sbjct: 219 MDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGI 278
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALV 387
+P+V T + L++ K+ +A TIM +
Sbjct: 279 MPNVQTFNVLVDNFCKDGMISRAKTIMGFM 308
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG + A + F MH + +++ L L + + + E+ EK +++
Sbjct: 397 FCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREM-EKMNLEL 455
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +NIV+ C G L+ A + + G+K DV+ YTT+I K+ + L
Sbjct: 456 NVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLL 515
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M GC PN T+NV ++ L+ + ++ K + LM+ G+ D T L+I F
Sbjct: 516 MKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF 572
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 4/258 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
FI +++ YG G +K A+ F+ + S N+ L VL +K + F ++
Sbjct: 125 FISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQI 184
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ + D+ ++ +I+ +C+MG+++ A V M VKP+++ Y T+I+ F K
Sbjct: 185 VKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGD 241
Query: 237 PEIGNGLWN-LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
E +++ +M + C PN T+ I K +A K M M G P+E+TYN
Sbjct: 242 MESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYN 301
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C +G +D AK + + M N +++M+ LC G F+ A ++ M+
Sbjct: 302 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 361
Query: 356 NWVPSVDTISALLEGLKK 373
N P V + ++ G K
Sbjct: 362 NMNPDVKSYEVVINGFCK 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G ++ A +M GC+ + NA + L + + + LM +
Sbjct: 272 YCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAK-MLMAKMRLNGFKD 330
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + ++K C +G D+A + + + + PDV +Y +I+ F K + + L
Sbjct: 331 NVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLL 390
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G P + +FN + LV +A L+ M + P+ V+YN +I G C +
Sbjct: 391 KEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMA 450
Query: 305 -GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + + + M+ + +Y ++ C+EG+ + + + K +V +++
Sbjct: 451 KGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLES 510
Query: 364 ISALLEGL 371
S L++ L
Sbjct: 511 FSVLVKQL 518
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ PD TY +I+G+C+ G ++ AKKV+ M + PN Y TMI+ C++GD A
Sbjct: 190 VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGDMESAR 246
Query: 347 IMCKDSMK-KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ M ++ +P+ T + L++G K + +A M + R
Sbjct: 247 LVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNR 291
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL----KVLTESRDLKAIQAFLMEVPEKFHI 182
+AG + A D DM +G V + N + K + + KA +AF+ E+ I
Sbjct: 212 RAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKA-EAFMKEMLAN-KI 269
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ +FN +I FC+ + A EMQK G+KP+++TY +LI+ + + E
Sbjct: 270 CPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID 329
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
LW+ MV G PN+ T+N I K+ +A K+ + + + P+ +T+N +I +C
Sbjct: 330 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYC 389
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G ++ + S+ML ++PN Y +I LC++ D A + + K V
Sbjct: 390 KEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T + L++GL KN++ A ++
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLL 471
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSF 189
+ A F +M G K + + N+ + L + L+ AI L + ++ +I ++
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID--LWDKMVGLGLKPNIVTY 346
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N +I FC+ ++ +A V ++ K + P+VIT+ T+I A+ K+ E G L + M+
Sbjct: 347 NALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLD 406
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G PN++T+N I L K+ A +L+ M+ G++ D VTYN++I G C++
Sbjct: 407 EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRN 466
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+K+ + M L PN Y T++ C EG A + K+ P+V T + L++
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIK 526
Query: 370 GLKKNNQPCKANTIM 384
G K N+ AN ++
Sbjct: 527 GYCKINKLEAANGLL 541
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A+D + M G K + + NA + + + +K +V ++ + ++ +
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ-ELVPNVIT 380
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I A+C+ G++++ + + M G+ P+V TY LI+ + + L N M
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG ++ T+N+ I L +S A KL+ M G++P+ VTYN ++ G+C G L
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL- 367
A V + M R PN Y +I C+ A + + ++K P+ T +
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
Query: 368 LEGLKKNNQP 377
LE L+K P
Sbjct: 561 LEMLEKGFSP 570
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 148/363 (40%), Gaps = 60/363 (16%)
Query: 54 LKAERDPEKLFQLFK-ANAHNRIVIENKYAFEDT---VSRLAGARRFDYIEHLLE----- 104
L A D E + + FK + R+ Y E T + LA ++R+ + L+
Sbjct: 52 LNAGVDSELVLRFFKWSQKEYRL----SYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKN 107
Query: 105 ---------HQKSLPQGRREGFIMRIMML---YGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
H L GR + I ML Y K + A + F YG K ++ S
Sbjct: 108 EKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTS 167
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N L L + + ++ E+ ++ I ++ +FNI I C G L+KA + +M
Sbjct: 168 CNPLLSALVKENKIGDVEYVYKEMIKR-RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDM 226
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ G+ P+V+TY TL+ + K R G +
Sbjct: 227 KAWGISPNVVTYNTLVDGYCK--RGSAG------------------------------KM 254
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
++A M M I P+EVT+N +I GFC+ ++ AKK + M + L PN Y ++
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSL 314
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV--QRR 390
I+ LC G A + + P++ T +AL+ G K +A + V Q
Sbjct: 315 INGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQEL 374
Query: 391 VPH 393
VP+
Sbjct: 375 VPN 377
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 32/297 (10%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+ML G +AGM+ A M G R V+S N L L + + Q L E+ +
Sbjct: 291 VMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHE 350
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGV-KPDVITYTTLISAFYKDNR 236
+Q + +++NI++ C+ G KA+ V + + K GV PDV+TYT+L+ A+ +
Sbjct: 351 -GVQPNSYTYNIIVDGLCKEG---KAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGN 406
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
N + + M KGC PN T+NV +Q L R +A +L+ M G D + N+
Sbjct: 407 AAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNI 466
Query: 297 VIKGFCRSGHLDMAKKVYSAM-------LGR----------------RLMPNRKIYQTMI 333
+I G CR+ LDMA + M LGR R +P+R Y T++
Sbjct: 467 IIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLV 526
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LC+EG F+ A + + K+ P + G K+ + A ++ ++++
Sbjct: 527 SALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKK 583
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ ++ A C+ G D+A ++EM + PD + Y T I + K + + +
Sbjct: 518 DRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVL 577
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC P+ T+N+ I K S + KL+ M+ GI P+ +TYN +IK FC
Sbjct: 578 RDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCER 637
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G ++ A + ML ++PN ++ +I C+ DF+ A
Sbjct: 638 GMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAA 678
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQK---LGV-KPDVITYTTLISAFYKDNRPEIG 240
++ +FN I A C+ G + AY + +MQ+ G+ +PD +T+ ++S F + +
Sbjct: 246 NVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEA 305
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L ++M C G + ++N + LV +A +L+ M G++P+ TYN+++ G
Sbjct: 306 RVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDG 365
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G +KV + + P+ Y +++H C EG+ A + + +K P+
Sbjct: 366 LCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPN 425
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
T + LL+ L K + +A ++
Sbjct: 426 SFTYNVLLQSLWKAGRITEAERLL 449
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 37/288 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR---DLKAIQAFLMEVPEKFHIQFD 185
GM+ A + +M G + + N + L + D++ ++ F+ + + D
Sbjct: 335 GMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFV----KSGVMTPD 390
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++ A+C G A ++ EM + G P+ TY L+ + +K R L
Sbjct: 391 VVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLE 450
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRR----------SWQANKLMGLMQRFGIE------- 288
M KG + A+ N+ I L + W L + R G
Sbjct: 451 RMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLA--LGRLGYSFLSLLTD 508
Query: 289 --------PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
PD +TY+ ++ C+ G D AKK M+G+ + P+ +Y T IH C+ G
Sbjct: 509 SSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHG 568
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+LA + +D KK PS T + L+ G ++ + ++ I+ L+
Sbjct: 569 KTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHN---SDEILKLIS 613
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 24/279 (8%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y G A +M GC + N L+ L ++ + + L + EK
Sbjct: 397 LLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKG 456
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVM--------VEMQKLGVK-------------- 218
+ D S NI+I C LD A ++ + + +LG
Sbjct: 457 Y-SLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRC 515
Query: 219 -PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD ITY+TL+SA K+ R + M+ K P+ ++ I ++ A K
Sbjct: 516 LPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVK 575
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
++ M++ G +P TYNL+I GF + D K+ S M G+ + PN Y ++I C
Sbjct: 576 VLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFC 635
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ G N A + + ++ VP++ + L++ K +
Sbjct: 636 ERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSD 674
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIG 240
I D ++ I +C+ G A V+ +M+K G KP TY LI F K N EI
Sbjct: 550 ISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEIL 609
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M KG PN+ T+N I+ + +A L+ M + I P+ ++ L+IK
Sbjct: 610 K-LISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKA 668
Query: 301 FCRSGHLDMAKKVYSAML 318
FC++ A++V+ A L
Sbjct: 669 FCKTSDFSAAQRVFDASL 686
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 185 DIFSFNIVIKAFC---------------------EMGILDKAYL-VMVEMQKLGV----- 217
D+F+ NI+++A C GIL + Y M LGV
Sbjct: 149 DVFTRNILLQALCAAGRMELARRVFDAMPERNEFSFGILARGYCRAGRSMDALGVLDSMP 208
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
+++ T+++ F ++ + + L M +G PN+ TFN RI L R A +
Sbjct: 209 TMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYR 268
Query: 278 LMGLMQ----RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+ MQ R PD+VT+++++ GFC +G +D A+ + M + + Y +
Sbjct: 269 IFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWL 328
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
L + G A + ++ + P+ T + +++GL K + + V+ V
Sbjct: 329 SGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGV 386
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 95/216 (43%), Gaps = 2/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A+ DM GCK + ++ N + E + I + E+ K I
Sbjct: 564 YCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGK-GICP 622
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK+FCE G+++KA ++ EM + + P++ ++ LI AF K + ++
Sbjct: 623 NVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF 682
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + C +++ L R +A ++ + I Y +I+G C+
Sbjct: 683 DASLST-CGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKV 741
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+D ++ ++ + + + +I L + G
Sbjct: 742 DEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERG 777
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PDV T L+ A R E+ +++ M + F +F + + RS A
Sbjct: 145 GAAPDVFTRNILLQALCAAGRMELARRVFDAMPERNEF----SFGILARGYCRAGRSMDA 200
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ M + V N V+ GFCR G +D A+++ M L PN + I
Sbjct: 201 LGVLDSMPTMNL----VVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISA 256
Query: 336 LCQEGDFNLAYIMCKDSMKKNW---VPSVDTIS 365
LC+ G AY + D M++ W +P D ++
Sbjct: 257 LCKAGRVLDAYRIFND-MQEKWERGLPRPDQVT 288
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
Y L+ A ++ R ++ L+ ++ G P++ T N+ +Q L R A ++ M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
E +E ++ ++ +G+CR+G A V +M L+ + T++ C+EG
Sbjct: 177 P----ERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLV----VCNTVVAGFCREGQV 228
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ A + + + P+V T +A + L CKA ++
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISAL------CKAGRVL 264
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 38/296 (12%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + KAG + +A F ++ G + TV S N + +S D++ + F L
Sbjct: 250 FFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE--EGFRLKG 307
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
V E + D+F+F+ +I C+ G LD+ L+ EM G+ P+ +T+TTLI K
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ ++ + +M+ +G P+L T+N I L +A +L+ M G++PD++T+
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFT 427
Query: 296 L-----------------------------------VIKGFCRSGHLDMAKKVYSAMLGR 320
+I G CR G + A ++ + ML
Sbjct: 428 TLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSA 487
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
P+ Y +I C++GD + + + K+ VP V T +AL+ GL K Q
Sbjct: 488 GFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQ 543
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I+ FN+++ FC+ G + A LV E+ K G++P V+++ TLIS K E G L
Sbjct: 248 IYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKG 307
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M +G P++ TF+ I L + R + + L M G+ P+ VT+ +I G C+ G
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A K + ML + + P+ Y +I+ LC+ GD A + + P T +
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFT 427
Query: 366 ALLEGLKKNNQ 376
L++G K+
Sbjct: 428 TLIDGCCKDGD 438
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
A++ F M + + ++ D+ ++N +I C++G L +A ++ EM G+KPD IT+TTL
Sbjct: 372 ALKNFQMMLAQG--VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I KD E + MV +G + F I L + R A +++ M G
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD+ TY +VI FC+ G + M K+ M +P Y +++ LC++G A +
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + P+ T + LL+G K+
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGS 578
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
R ++ N F + + D L Q L QG R + ++ G K G
Sbjct: 346 GRGLVPNGVTFTTLIDGQCKGGKVDLA--LKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A +M G K + + + D+++ + E+ I+ D +F
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEE-GIELDDVAFT 462
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C G + A ++ +M G KPD TYT +I F K ++G L M
Sbjct: 463 ALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSD 522
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
G P + T+N + L + + A L+ M G+ P+++TYN+++ G + G
Sbjct: 523 GHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P + FNV + A + + + G+ P V++N +I G C+SG ++ ++
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M + P+ + +I+ LC+EG + ++ + + VP+ T + L++G K
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 374 NNQ 376
+
Sbjct: 366 GGK 368
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+GC NL VR++ V RSW L + G P +N+++ GFC++G +
Sbjct: 212 RGC-ENLLRRVVRLRP-VEIERSWA---LYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGN 266
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALL 368
A+ V+ + R L P + T+I C+ GD + + K M+ V P V T SAL+
Sbjct: 267 ARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL-KGVMESEGVCPDVFTFSALI 325
Query: 369 EGLKKNNQ 376
GL K +
Sbjct: 326 NGLCKEGR 333
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 111/195 (56%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N +I + C++ ++++A+ + EM G+ PDV+TY+ LIS F + +
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+N M+ + P++ TFN+ + + + + +M + GI+P+ VTYN ++ G+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C ++ AK +++ M + P+ + Y MI+ C+ F+ A + K+ +KN +P V
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 362 DTISALLEGLKKNNQ 376
T S+L++GL K+ +
Sbjct: 401 VTYSSLIDGLSKSGR 415
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI S++I+I FC++ D+A + EM + + PDV+TY++LI K R L
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGF 301
+ M +G PN+ T+N + L ++ Q +K + L+ +F G +PD TY+++IKG
Sbjct: 424 DQMHDRGVPPNICTYNSILDALC---KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+SG L+ A+KV+ +L + + Y MI C EG FN A + +P
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540
Query: 362 DTISALLEGLKKNNQPCKANTIM-ALVQRRVP 392
T ++ L K ++ A ++ ++ R +P
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIARGLP 572
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 7/248 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK---VLTESRDLKAIQAFLMEVPEKFHIQ 183
K ++ A D F +M G V + +A + +L + +D AI F + E +I+
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKD--AIDLFNKMILE--NIK 292
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+++FNI++ AFC+ G + + V M K G+KP+ +TY +L+ + +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M G P++ ++++ I ++ +A L M R I PD VTY+ +I G +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG + A ++ M R + PN Y +++ LC+ + A + K + P + T
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 364 ISALLEGL 371
S L++GL
Sbjct: 473 YSILIKGL 480
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N L L +S+ + +L + E I+ ++ + NI+I FC++G++ A+ V ++
Sbjct: 88 FNKILGSLVKSKHYHTV-LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 213 QKLGVKPDVITYTTLISAF-----------YKDNRPEIG------------NGLWNLMVC 249
K+G PD IT+TTL + D +G +GL +
Sbjct: 147 LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 250 KGCF------------PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ PN+ +N I + + +A L M GI PD VTY+ +
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I GFC G L A +++ M+ + P+ + +++ C++G + MK+
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 358 VPSVDTISALLEG 370
P+ T ++L++G
Sbjct: 327 KPNFVTYNSLMDG 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDIFSF 189
AM+ F +MH V + ++ + L++S + ++ +++ ++ H + +I ++
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI----SYALQLVDQMHDRGVPPNICTY 438
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N ++ A C+ +DKA ++ + + G +PD+ TY+ LI + + E ++ ++
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLV 498
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG ++ + + IQ + +A L+ M+ G PD TY ++I + DM
Sbjct: 499 KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558
Query: 310 AKKVYSAMLGRRL 322
A+K+ M+ R L
Sbjct: 559 AEKLLREMIARGL 571
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 63/130 (48%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
K + I+Y++ + F+ +N + L+N ++ + P FN + LV +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L M+ GI+P+ V N++I FC+ G + A V++ +L +P+ + T+ LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166
Query: 338 QEGDFNLAYI 347
+G A++
Sbjct: 167 LKGQIQQAFL 176
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 16/331 (4%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSR-------LAGARRFDYIEHLLEHQKSL 109
E+D +++ ++ K V+EN+ E TV L+ AR +E + E KS
Sbjct: 191 EKDDDRVAEMLK-------VMENE-GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK 242
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
F ++ Y +AG ++ A + F + G + + A + + ++A
Sbjct: 243 NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAA 302
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+ + ++ + + + FN +I +C ++DKA + + M+K+G++ DV TY TL
Sbjct: 303 EMLVTDMQVR-GVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLAC 361
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ NR + L +M+ KG PN ++ I N+ +A +L M G EP
Sbjct: 362 GLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEP 421
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
VTYN+++ G+ + G + A++ + M + L+P+ Y ++H C G ++A +
Sbjct: 422 SLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLF 481
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
++ ++ P++ +AL+ GL K + +A
Sbjct: 482 EEMKQRGSKPNLVAYTALISGLAKEGRSEEA 512
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 145/359 (40%), Gaps = 52/359 (14%)
Query: 66 LFKANAHNRIVIENKYAFEDTVSRLAG---------------ARRFDYIEHLLEHQ-KSL 109
LF+A A + AFE TVSRL G A D LL+ S
Sbjct: 78 LFRAYADSGAAARAAEAFELTVSRLGGLDPRSLTSSLLSLRRAGHLDTAADLLKQAATSC 137
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK---------------------- 147
P ++ Y K+G + HA +M +G K
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197
Query: 148 -------------RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
TV + + L+ +RD+ ++A E+ K ++ D++ ++ VI
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVIN 256
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A+C G + +A V E G++P+ TY LI+ F K + E L M +G
Sbjct: 257 AYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 316
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N FN I K +A ++ +M++ GIE D TYN + G R+ +D AK +
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ + + PN Y T+I C EGD A + ++ PS+ T + +++G K
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 96/203 (47%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S ++V+ +C+ G + A ++ EM + GVK + + Y +L+ A+ ++ + + +
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P + T+ + + L R + + M+ + D Y+ VI +CR+G+
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +V+ +G + PN Y +I+ C+ G A ++ D + + +
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+++G + N KA I ++++
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEK 346
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 35/221 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++NI+I+ FC +G L K EM++ G P+V+TY TLI A+ K R + GL
Sbjct: 9 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG PNL ++NV I L + +A +++ M G PDEVTYN ++ G+C+
Sbjct: 69 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128
Query: 305 G--------HLDMAKK-------VYSAMLG--------------------RRLMPNRKIY 329
G H +M + Y+A++ R L PN + Y
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
T+I ++G N AY + + + + PSV T +A + G
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A+ +M G +V + A + + ++R+L F ++ + ++
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR-GLRP 183
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++ +I F G+L++AY ++ EM + G P V+TY I R E G+
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KG P++ +++ I K +A ++ M G+ PD VTY+ +I+G C
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A + ML L P+ Y T+I+ C EGD N A + + + K ++P T
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K + +A ++
Sbjct: 364 SVLINGLNKQARTREAKRLL 383
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I A M G + + S N + L +K L E+ K
Sbjct: 55 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP- 113
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N ++ +C+ G +A ++ EM + GV P V+TYT LI++ K +
Sbjct: 114 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 173
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ I + +A +++ M G P VTYN I G C
Sbjct: 174 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 233
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A V M+ + L P+ Y T+I C++G+ + A+ M ++ ++K P T
Sbjct: 234 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 293
Query: 365 SALLEGL 371
S+L++GL
Sbjct: 294 SSLIQGL 300
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
V P+V TY LI F + G G + M GC PN+ T+N I R +A
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L+ M G++P+ ++YN++I G CR G + A ++ M + P+ Y T+++
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
C+EG+F+ A ++ + ++ PSV T +AL+ N CKA +
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALI------NSMCKARNL 166
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 18/221 (8%)
Query: 170 QAFLM--EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+AF M E+ EK + D +++ +I+ CEM L +A + EM +G+ PD TYTTL
Sbjct: 273 RAFQMKQEMVEK-GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I+A+ + L + M+ KG P+ T++V I L + R+ +A +L+ +
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391
Query: 288 EPDEVTYNLVI---------------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
P +VTY+ +I KGFC G + A +V+ +M+ R P +Y +
Sbjct: 392 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 451
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
IH C+ G+ A+ + K+ + +VP T+ L++ L K
Sbjct: 452 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
++ LTE+ DL + M +P D F++ +I A+C G L+KA + EM G
Sbjct: 303 MRRLTEACDLSQ-EMLDMGLPP------DEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN-------- 268
PD +TY+ LI+ K R L ++ + P+ T++ I++ N
Sbjct: 356 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 415
Query: 269 -------KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
K +A+++ M +P E YN++I G CR G+L A +Y M+
Sbjct: 416 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475
Query: 322 LMPNRKIYQTMIHYLCQEG 340
+P+ T+I L +EG
Sbjct: 476 FVPHTVTVITLIKALFKEG 494
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ T+N+ I+ + + G M+R G P+ VTYN +I +C+ G +D A +
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+M + + PN Y +I+ LC+EG A+ + ++ K + P T + LL G K
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 374 NNQPCKANTIMALVQR 389
+A I A + R
Sbjct: 128 EGNFHQALVIHAEMVR 143
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M R + P+ TYN++I+GFC G L + M +PN Y T+I C+ G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A+ + K K P++ + + ++ GL
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGL 90
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG+ A+ F M Y CK + + + +L R Q+F + +KF +
Sbjct: 187 YVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKF--EP 244
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +++ +C G + +A V EM+ G P+V TYT +I A + + + ++
Sbjct: 245 DVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVF 304
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ GC PN TFN ++ V R+ + ++ M+R G PD VTYN +I+ C+
Sbjct: 305 AEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKD 364
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
G+LD A KV ++M+ + PN + + + + D N A+
Sbjct: 365 GNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAH 406
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 7/315 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
+K AF +S L RR + + SL I+ ++ G +AG I A
Sbjct: 211 DKIAFSILISILCRKRRATEAQSFFD---SLKDKFEPDVIVYTNLVRGWCRAGNIPEAER 267
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F +M + GC V + + L + E+ + + + +FN +++
Sbjct: 268 VFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLD-VGCEPNSITFNNLLRVH 326
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G +K V +M+++G PD +TY LI + KD + + N MV KGC PN
Sbjct: 327 VKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNA 386
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+TFN + R A++L M+ + + VTYN++++ F + DM K+
Sbjct: 387 STFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKE 446
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNN 375
M + PN Y +I C G +N AY ++ +++ + PS+ +L+ L+K
Sbjct: 447 MDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAG 506
Query: 376 QPCKANTIMALVQRR 390
Q K ++A++ R
Sbjct: 507 QLKKHEELVAVMVDR 521
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 48/251 (19%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR---- 236
+++ I +F+I+I+ + G+ +A M+ KPD I ++ LIS + R
Sbjct: 172 NVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEA 231
Query: 237 ------------PEI-------------GN-----GLWNLMVCKGCFPNLATFNVRIQHL 266
P++ GN ++ M GC PN+ T+ + I L
Sbjct: 232 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDAL 291
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A+ + M G EP+ +T+N +++ ++G + +VY+ M P+
Sbjct: 292 CRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDT 351
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK------------- 373
Y +I C++G+ + A + +KK P+ T + L + K
Sbjct: 352 VTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAK 411
Query: 374 -NNQPCKANTI 383
CKANT+
Sbjct: 412 MKELKCKANTV 422
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
D + V+ M+ V+ + T++ LI + + +N M C P+ F++
Sbjct: 158 FDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSI 217
Query: 262 RIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L KRR+ +A L +F EPD + Y +++G+CR+G++ A++V++ M
Sbjct: 218 LISILCRKRRATEAQSFFDSLKDKF--EPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVA 275
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
MPN Y +I LC+ G A+ + + + P+ T + LL
Sbjct: 276 GCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLL 323
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y +I K ++G + +LM + ++ TF++ I+ V + +A M+
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME 204
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ +PD++ ++++I CR A+ + + L + P+ +Y ++ C+ G+
Sbjct: 205 DYNCKPDKIAFSILISILCRKRRATEAQSFFDS-LKDKFEPDVIVYTNLVRGWCRAGNIP 263
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
A + + +P+V T + +++ L + Q +A+ + A
Sbjct: 264 EAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFA 305
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 45/317 (14%)
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
E + ++ + +A M A+ F + GC V+S NA L +R AF
Sbjct: 84 ESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFF 143
Query: 174 MEVPEKF---HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+ I ++ ++NI++++ C G LD+A + ++ G+ PD ITY+TL+S
Sbjct: 144 ASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSG 203
Query: 231 FYKDNRPEIGNGLWNL-----------MVC-----KGCF--------------------- 253
F K+NR + N L+ L VC GCF
Sbjct: 204 FVKNNR--LDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGA 261
Query: 254 -PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PNLAT+NV + L +A + M +PD +TY +I G CRS +D A +
Sbjct: 262 SPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAAR 321
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
VYS M+ L+P+ IY +++ C G A+ DSM + + +V + + +L+GL
Sbjct: 322 VYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKF-WDSMSVSGIRNVTSYNIMLKGLF 380
Query: 373 KNNQPCKANTIMALVQR 389
KA + L+++
Sbjct: 381 DGGMVDKATDLWELLEK 397
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC V + + ++ L + + A ++ +K +Q D+ NI+I C G +D+
Sbjct: 540 GCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDK-GLQTDVVMHNILIHGLCSAGKVDE 598
Query: 205 AYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ EM +K P+V+TY TL+ FY+ + LW ++ G P++ ++N RI
Sbjct: 599 ASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRI 658
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ L + R+ + +L+ M GI P +T+N++++ + G
Sbjct: 659 KGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ D FS++ +I C+ G LD A + ++ KP+ Y LI+ F + ++
Sbjct: 437 ELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIR 496
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ M C P T+N I L + +A++ M G D TY +I+G C
Sbjct: 497 VYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLC 556
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA-YIMCKDSMKKNWVPSV 361
R +D A +++ +L + L + ++ +IH LC G + A ++ + K N P+V
Sbjct: 557 RDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNV 616
Query: 362 DTISALLEGLKKNNQPCKANTI-MALVQ 388
T + L++G + KA ++ MA+++
Sbjct: 617 VTYNTLMDGFYETGCFDKAASLWMAILE 644
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 111/263 (42%), Gaps = 1/263 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
AG + A + M + G R V S N LK L + + + + + D+
Sbjct: 348 AGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMV 406
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F+ +I CE G +K+ ++ E + G + D +Y+++IS KD R + L+ +
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
PN +N I + A ++ M P +TYN +I G C++
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKY 526
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A + ML + M + Y ++I LC++ + A + + K V + L
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ GL + +A+ +++ ++ +
Sbjct: 587 IHGLCSAGKVDEASQLLSEMKEK 609
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I FC+ A V +M + P ITY TLI K + + M+
Sbjct: 478 YNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREML 537
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC ++ T+ I+ L ++ A L + G++ D V +N++I G C +G +D
Sbjct: 538 EKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVD 597
Query: 309 MAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ S M + PN Y T++ + G F+ A + ++ VP + + +
Sbjct: 598 EASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTR 657
Query: 368 LEGLKKNNQ 376
++GL N+
Sbjct: 658 IKGLCSCNR 666
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ +A EM + G DV TY +LI +D + + LWN
Sbjct: 511 ITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQ 570
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM-QRFGIEPDEVTYNLVIKGFCRSG 305
++ KG ++ N+ I L + + +A++L+ M ++ P+ VTYN ++ GF +G
Sbjct: 571 ILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETG 630
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
D A ++ A+L L+P+ Y T I LC
Sbjct: 631 CFDKAASLWMAILENGLVPDIISYNTRIKGLCS 663
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 125/250 (50%), Gaps = 7/250 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A D F M G K V + N+ + L L ++ E+ I ++ +FN +I
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFNSLI 333
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
AF + G L +A + EM + + P+++TY +LI+ F +R + ++ LMV K C
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ T+N I+ +R + +L M + G+ + VTYN +I+G ++G DMA+K+
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ + P+ Y ++ LC+ G A ++ + K P++ T + ++EG+
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM-- 511
Query: 374 NNQPCKANTI 383
CKA +
Sbjct: 512 ----CKAGKV 517
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 109/212 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D+F++N +I C G A ++ +M + + P+V+T+ +LI AF K+ +
Sbjct: 283 ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKL 342
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ + PN+ T+N I R +A ++ LM PD VTYN +
Sbjct: 343 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 402
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
IKGFC++ ++ +++ M R L+ N Y T+I L Q GD ++A + K +
Sbjct: 403 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 462
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T S LL+GL K + KA + +Q+
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQK 494
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + DI + + ++ +C + +A ++ +M ++G KPD +T+ TLI + N+
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV +GC P+L T+ + L + A L+ M++ IE + V YN +I
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A +++ M + + P+ Y ++I LC G ++ A + D +++
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P+V T ++L++ K + +A + ++QR +
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+F++ V+ C+ G +D A ++ +M+K ++ +V+ Y T+I K +
Sbjct: 218 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+N M KG P++ T+N I L N R A++L+ M I P+ VT+N +I F
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K++ M+ R + PN Y ++I+ C + A + + K+ +P V
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L++G CKA +
Sbjct: 398 TYNTLIKGF------CKAKRV 412
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I + ++++I++ FC L A V+ +M KLG +PD++T ++L++ +
Sbjct: 103 LGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 162
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TFN I L ++ +A L+ M G +PD
Sbjct: 163 HGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 222
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY V+ G C+ G +D+A + M ++ N IY T+I LC+ + A+ +
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM 282
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P V T ++L+ L + A+ +++ +++R++
Sbjct: 283 ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 87/156 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ +++ + EM + G+ + +TY TLI ++ ++ ++
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L + +A + +Q+ +EP+ TYN++I+G C++
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ ++ ++ + + PN IY TMI C++G
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 550
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F M C V + N +K +++ ++ E+ ++ + + ++N
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYN 435
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I+ + G D A + +M GV PD+ITY+ L+ K + E ++ +
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
PN+ T+N+ I+ + + L + G++P+ + Y +I GFCR G + A
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M +P+ Y T+I ++GD + + K+ +V TIS ++
Sbjct: 556 DALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 615
Query: 371 L 371
L
Sbjct: 616 L 616
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ + TY+ L++ F + ++ + +
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLG 140
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T + + + +R +A L+ M G +PD VT+N +I G
Sbjct: 141 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHN 200
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M+ R P+ Y T+++ LC+ GD +LA + K K +V +
Sbjct: 201 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYN 260
Query: 366 ALLEGLKK 373
+++GL K
Sbjct: 261 TIIDGLCK 268
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + EM K P +I ++ L+SA K N+ ++ L M G N T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ + + A ++G M + G EPD VT + ++ G+C + A + M+
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + A + + + P + T ++ GL K
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 51/298 (17%)
Query: 118 IMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
++ + ML G K G IK A D F M + G V S N L + A + L+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML-------NGYATKGCLV 376
Query: 175 EVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ + F + D ++FN++IKA+ G+LDKA ++ EM+ GVKPDV+TY T+I
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ------------------------ 264
+A + + + +N M+ +G P+ +N IQ
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 265 -----------HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+L R A + L G+ PD V Y++++ G+C G ++ A +V
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ AM+ + PN +Y T+++ C+ G + + ++ +++ PS S +++GL
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + + N+ + L ++R + +AFL ++ K + +
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK-RVLPNN 289
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+T + L+ + K + + +++
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ ++N+ + K L LM GI PD T+N++IK + G
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + P+ Y+T+I LC+ G + A + + P +
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L++G + KA +++ + H + F SI++
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHL---DIVFFSSIIN 507
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKR---TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
Y GM+ AM F +M +G K T +++ AAL + + D A++ F + +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD--AMEKFNQMIDQG-- 459
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D +++N +I+ FC G L KA ++ E+ G+ D++ ++++I+ K R
Sbjct: 460 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++L V G P+ +++ + + +A ++ M GIEP+ V Y ++ G+
Sbjct: 520 NIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 579
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G +D ++ ML R + P+ +Y +I L Q G A + + + +
Sbjct: 580 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDI 639
Query: 362 DTISALLEGLKKN 374
T + +L GL KN
Sbjct: 640 CTYNIVLRGLFKN 652
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ +I N +++ FCE D+A +++ +LG PDV +Y+ L+ + +
Sbjct: 142 LRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 241 NGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L +M G C PN+ +N I + +A L M + GI PD VTYN V+
Sbjct: 202 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 261
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ +D A+ M+ +R++PN Y +I+ G + A + K+ + + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321
Query: 359 PSVDTISALLEGLKK 373
P V T+S L+ L K
Sbjct: 322 PDVVTLSMLMGSLCK 336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV--KPDV 221
R +A+ L PE + D+FS++I++K+ C+ G +A ++ M + G P+V
Sbjct: 161 RTDEALDILLHRTPELGCVP-DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNV 219
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y T+I F+K+ L+ MV +G P+L T+N + L R +A +
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 279
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M + P+ TYN +I G+ +G A +V+ M ++P+ ++ LC+ G
Sbjct: 280 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 339
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEG 370
A + K P V + + +L G
Sbjct: 340 IKEARDVFDTMAMKGQNPDVFSYNIMLNG 368
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++++ +C +G ++KA V M G++P+V+ Y TL++ + K R + G L+
Sbjct: 533 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 592
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P+ +++ I L R+ A M GI D TYN+V++G ++
Sbjct: 593 REMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKN 652
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A ++ + + N TMI + Q A + + VPSV T
Sbjct: 653 RCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTY 712
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQ 398
S ++ L K LV+ FSS Q
Sbjct: 713 SIMITNLIKE----------GLVEEAEDMFSSMQ 736
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + ++ +C++G +D+ + EM + G+KP I Y+ +I ++ R
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G ++ T+N+ ++ L R +A L ++ ++ + +T N +I G
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++ ++ AK +++++ RL+P+ Y MI L +EG A M P+
Sbjct: 685 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
++ ++ L K N+ +A ++ + R +FS L+
Sbjct: 745 RLLNHVVRELLKKNEIVRAGAYLSKIDER--NFSLEHLTT 782
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI-QFDIFSFNIVIKAFCEMGILD 203
GC V S + LK L + L + E + ++ ++N VI F + G ++
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD++TY +++ A K + MV K PN T+N I
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD VT ++++ C+ G + A+ V+ M +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 324 PNRKIYQTMIHYLCQEG 340
P+ Y M++ +G
Sbjct: 357 PDVFSYNIMLNGYATKG 373
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 38/198 (19%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLW----------NLMV--------CK-------- 250
+ P TY L+ + +RPE+ + N+++ C+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 251 ----------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG--IEPDEVTYNLVI 298
GC P++ ++++ ++ L ++ +S QA+ L+ +M G P+ V YN VI
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GF + G ++ A ++ M+ R + P+ Y +++H LC+ + A + + K +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286
Query: 359 PSVDTISALLEGLKKNNQ 376
P+ T + L+ G Q
Sbjct: 287 PNNWTYNNLIYGYSSTGQ 304
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E L ++ L +G + I+ +++ G +AG A F++M G + + N L
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
+ L ++R FL + +++ +I + N +I + +++A + + + +
Sbjct: 647 RGLFKNRCFDE-AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 705
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P V+TY+ +I+ K+ E +++ M GC PN N ++ L+ K +A
Sbjct: 706 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 765
Query: 278 LMGLMQRFGIEPDEVTYNLVI-----KGFCR 303
+ + + +T L++ KG CR
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVDLFSSKGTCR 796
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D F M + G + + N+ ++ L K A L E+ +I DI +FN
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM-RSLNIMPDIVTFN 312
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+++ C+ G + +A V+ M ++GV+PDV+TY++L+ + + L++ M+ K
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P++ ++N+ I +R +A +L M G+ P+ V+YN +I G C+ G L A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ ++ M +PN Y ++ C++G F A+
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 34/288 (11%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF------ 180
K G AM+ F DM GC+ V + + L + + A L ++ E
Sbjct: 180 KVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV 239
Query: 181 ----------------------------HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
I DIF++N +I+ C +A ++ EM
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ L + PD++T+ L+ K+ + G+ M G P++ T++ + +
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A KL M G +PD +YN++I G+C+ +D AK++++ M+ + L PN Y T+
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
IH LCQ G A + K+ +P++ T S LL+G K KA
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKA 467
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 88/156 (56%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+FS+NI+I +C++ +D+A + EM G+ P+ ++Y TLI + L+
Sbjct: 377 DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLF 436
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G PNL T+++ + + +A +L MQ +P+ V YN++I C+S
Sbjct: 437 KNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKS 496
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G+L A+K++S + + L PN +IY T+I+ LC+EG
Sbjct: 497 GNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEG 532
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q I +F +I C++G +A + +M G +PDV TYTT+I+ K
Sbjct: 161 KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETA 220
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
GL M GC PN+ T++ I RR +A + M+ GI PD TYN +I
Sbjct: 221 AAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLI 280
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G C A + + M +MP+ + ++ +C+EG + A + K +
Sbjct: 281 QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Query: 359 PSVDTISALLEG 370
P V T S+L+ G
Sbjct: 341 PDVVTYSSLMYG 352
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 104/200 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I++ +I+I F + +D A+ V+ ++ KLG++P ++T+TTLI+ K + L+
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +GC P++ T+ I L + A L+ M+ G +P+ VTY+ +I +
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++S M + + P+ Y ++I LC + A + + N +P + T
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L++ + K + +A ++
Sbjct: 312 NVLVDTICKEGKVSEAQGVL 331
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 1/245 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y + A F M GCK V S N + + + + + E+ +
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ S+N +I C++G L +A + M G P++ TY+ L+ F K
Sbjct: 409 LTPNNV-SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKA 467
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M PNL +N+ I + A KL + G++P+ Y +I G
Sbjct: 468 FRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIING 527
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G LD A + + M P+ Y +I D + A + + K ++
Sbjct: 528 LCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587
Query: 361 VDTIS 365
V T +
Sbjct: 588 VGTTA 592
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 1/171 (0%)
Query: 219 PDVITYTTLISAFYKDNRP-EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P +I +T L+SA K + + L M G PN+ T ++ I + +R A
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
++ + + G++P VT+ +I C+ G A +++ M+ R P+ Y T+I+ LC
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+ G+ A + K + P+V T S +++ +K+ + +A I + ++
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 38/296 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K G I+ A F ++ G + T S N + L +SR+L + F L + E+ I
Sbjct: 233 FCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD--EGFRLKKTMEENRIY 290
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F+++++I C+ G LD A + EMQ+ G++P+ IT+T LI Y+ R +
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNT 350
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ G P+L +N + L +A KL+ M+ G++PD++TY +I G+C+
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCK 410
Query: 304 SGHLDMAKKV---------------YSAML------GR--------------RLMPNRKI 328
G L+ A ++ ++A++ GR + P+
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I C++G+ + + + K+ P V T + L+ GL K Q AN ++
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLL 526
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 15/260 (5%)
Query: 121 IMMLYGKAGMIKHAMDTF-------YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+M+ Y +G + A+ F + + +GC L + S I F
Sbjct: 159 LMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGC-------GYLLDKMINSNSPVTIWTFY 211
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E+ E + + +NI+I FC+ G + A L+ E++K G++P +++ TLI+ K
Sbjct: 212 SEILE-YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ G L M +P++ T++V I L + R A +L MQ+ G+ P+ +T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ +I G RS +D A Y ML + P+ +Y T+++ LC+ GD N A + +
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390
Query: 354 KKNWVPSVDTISALLEGLKK 373
P T + L++G K
Sbjct: 391 MVGMKPDKITYTTLIDGYCK 410
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 137 TFYDMHL-YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
TFY L YG V+ N + + ++ + E+ K ++ SFN +I
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI-RKRGLRPTTVSFNTLING 267
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C+ LD+ + + M++ + PDV TY+ LI K+ R ++ L++ M +G PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
TF I RR A M G++PD V YN ++ G C+ G ++ A+K+
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M + P++ Y T+I C+EGD A + K ++ V +AL+ G ++
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447
Query: 376 Q 376
+
Sbjct: 448 R 448
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 136/322 (42%), Gaps = 41/322 (12%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
R+ ++ F+L K NRI + + + + L R D E L + + +G R
Sbjct: 271 SRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ--RGLRPN 327
Query: 117 FIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
I ++ G ++ + AM+T++ M G K
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKP-------------------------- 361
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
D+ +N ++ C++G ++KA ++ EM+ +G+KPD ITYTTLI + K+
Sbjct: 362 ----------DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 411
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
E + M +G + F I R A + + M G++PD+ TY
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+VI G+C+ G++ M K+ M P Y +++ LC++G A ++ + +
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 355 KNWVPSVDTISALLEGLKKNNQ 376
P T + LLEG KN +
Sbjct: 532 LGVTPDDITYNILLEGHCKNGK 553
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+G P YN++I FC+ G + AK +++ + R L P + T+I+ LC+ + +
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 345 AYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + K +M++N + P V T S L+ GL K + A + +Q+R
Sbjct: 277 GFRL-KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ ++N+++ C+ G + A +++ M LGV PD ITY L+ K+ + E
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
KAG ++ A+D F +M C T + N+ + + D+ +AI+ V +K D
Sbjct: 226 KAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK--CAPD 280
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++ AFC+MG LD AY + +M + PDV+T+T+L+ + R E L
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +GC P + T+N + + +A +L+ + G P+ VTYN+++ G CR+G
Sbjct: 341 EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 400
Query: 306 HLDMAKKVYSAMLGRRLMP---NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
D A + Y L P + +Y ++ LC++G + A ++ +++ +VP+
Sbjct: 401 RTDQALQ-YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 459
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T + ++ L K +QP +A+ ++
Sbjct: 460 TFATVVFALCKAHQPQQAHELL 481
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 14/344 (4%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
L K + RD ++ Q + H + + V L R D L+E L
Sbjct: 48 GLSKARRLRDAVQVLQEMVSARH----VPDNTTLTVVVQSLCLGDRVDDARELVEEM--L 101
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+G I ++ G K + A+ M GC TV + N+ + +R +
Sbjct: 102 HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD 161
Query: 168 AIQAFLME-VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
F+ + V E H DI ++ +I FC+ + + ++ E+ + G PD++TY+T
Sbjct: 162 EAHGFMEQMVAEGCHP--DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I K R ++ M C P T+N I +A +L+G M
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD VTY ++ FC+ G LD A +++ M+ +L P+ + +++ LC EG A
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 336
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ ++ ++ P++ T + +++G K NQ KA ++A + R
Sbjct: 337 ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSR 380
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 176 VPEKFH--IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
V E H + + +++ ++ C+ LD+A ++ M + G P V+TY ++I+ F +
Sbjct: 97 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
R + +G MV +GC P++ T+ I R + +L+G + R G PD VT
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y+ VI G C++G L A ++ M P Y ++I C+ GD + A + +
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
P V T + L+ K + + L Q+ V + S + F S++
Sbjct: 274 DDKCAPDVVTYTTLMSAFCKMG---RLDDAYELFQQMVANKLSPDVVTFTSLVD 324
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ A++ ++ GC T+ + N + ++ ++ + + + + + + +
Sbjct: 330 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP-NTVT 388
Query: 189 FNIVIKAFCEMGILDKA--YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+NI++ C G D+A YL + + V Y ++ A +D R + +
Sbjct: 389 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G P ATF + L + QA++L+ M ++G P T + V+ +CR+G
Sbjct: 449 MIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 508
Query: 307 LDMAKKVYSAM 317
+ A ++ S +
Sbjct: 509 IQKADELASEL 519
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 38 REPLVDKPLEP---PALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAG 92
R+P+V P P P V+ + ++ DP ++F + ++ + + +L
Sbjct: 37 RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGR 96
Query: 93 ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
R F+ I+ +L +S ++ +Y +A + + + TFY M + K
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFH-IQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
LN L VL R +AF + + H + + S+N++++AFC L AY + +
Sbjct: 157 LNRILDVLVSHRGYLQ-KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + V PDV +Y LI F + + L + M+ KG P+ ++ + L K +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A KL+ M+ G PD V YN +I GFCR A+KV ML PN Y+T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I LC +G F+ ++ + K + P + L++G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLM 282
+T LI + + PE + M+ P N + LV+ R Q A +L
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G+ P+ +YNL+++ FC + L +A +++ ML R ++P+ Y+ +I C++G
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
N A + D + K +VP + + LL L + Q
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
IK+A M GC + + N +K D K + + ++ H ++ ++N
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYN 464
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+IK +C+ G A ++ M+ G KPD +YT LI F K ++ E GL+N MV
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN T+ I + A L+ M+R G P+ TYN++I G + + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ M+ + PN Y MI LC+ G +LA M +++ +P++ T S+L+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 371 LKKNNQPCKANTIMALVQR 389
L + + +A + A ++R
Sbjct: 645 LGQEGKVEEAENLFAELER 663
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S+ +I FC++ ++ A+ + EM G+ P+ +TYT LI + KD + + L
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC PN+ T+NV I L + A +L +M GI P+ VTY +I G C++
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +A ++++ M+ + +PN Y ++I L QEG A + + + +P T
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 365 SALLE 369
++E
Sbjct: 674 VKMIE 678
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 79/153 (51%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I A C+MG + A+ + V+M+ G +P+V TYT LIS ++ GL++ M G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FPN T+N I LV RR A ++ LM R G P+ VTYN +IKG+C G A
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
V + ML R N Y T+I C G+ A
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F DM GC+ V + A + L S LK + L + + + +
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK-VAIGLFHRMSRDGVFPNTVT 392
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I E + A++V+ M + G P+++TY +I + P+ + N M+
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G NL T+N I+ + + A +++ LM+ G +PDE +Y +I GFC+ ++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M+ L PN Y +I C++ + A + + + P+V T + L+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572
Query: 369 EGLKKNN 375
GL K N
Sbjct: 573 HGLTKQN 579
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 9/299 (3%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYG 145
S+ A AR +++ L + G R G +L + GM MD ++ M G
Sbjct: 157 SKEAMARTMSFLDMLSQ------SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ + NA + L + ++ + + +V E + D F++ +I C LD A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFES-EMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V +M K G +P+ +TY+TLI+ R L M+ G P T I
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A +L M+ G EP+ TY +I G C SG L +A ++ M + PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I+ L + A+++ + P++ T + +++G P KA +M
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I +C+ LD A ++ M++ G +P+V TY LI K N L +M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G FPN+ T+ I L + A ++ M G P+ +TY+ +I+ + G +
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A+ +++ + L+P+ Y MI G A+ +K P++ T L
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPHFS 395
++GLK N+ A+ +A + VP+ S
Sbjct: 712 IKGLK--NEYLLADQRLAALPDVVPNCS 737
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E ++ + ++ ++N++I + A + M + G+ P+V+TYT +I
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + ++N M+ +GC PNL T++ I+ L + + +A L ++R G+ PDE+
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TY +I+ + SG ++ A M+ P Y +I L E
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N VI A C+ G + A +M ++ + + PD TYT++I + + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M +GC PN T++ I L + R +A L+ M GI P T I
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G + A +++ M + PN Y +I LC G +A + + P+
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T +AL+ L +N + A ++ L+ R
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGR 418
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F M GC + + ++ ++ L + ++ + E+ E+ + D
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDE 670
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS-------------AFYK 233
++ +I+A+ G ++ A+ + M K G +P + TY LI A
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730
Query: 234 DNRPEIGNGLW-------NLMVCK--GCFPNLATF--NVRIQHLVNKRRSWQANKLMGLM 282
D P G ++M K P L+ N + +L R ++AN+L+G M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G+ PD+ YN ++ R ++D+A V+ M + + Y+ +I LCQ
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
A I ++ + + W P + L++GL ++
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 98/262 (37%), Gaps = 37/262 (14%)
Query: 104 EHQKSLPQGRREGFI------MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E + + R G I ++++ Y +G ++HA + M GC+ T+ + +
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 158 KVL---------------------------TESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K L T+ + + A L E+ +Q N
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ----N 768
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ G +A ++ M G+ PD Y +L+ + + ++ G++ M +
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC +L + I L R +A M PD+V ++I G R G+ D+
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888
Query: 311 KKVYSAMLGRRLMPNRKIYQTM 332
+ M RR MP+ IY +
Sbjct: 889 MEFLHIMETRRYMPSFHIYTIL 910
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
IK+A M GC + + N +K D K + + ++ H ++ ++N
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYN 464
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+IK +C+ G A ++ M+ G KPD +YT LI F K ++ E GL+N MV
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN T+ I + A L+ M+R G P+ TYN++I G + + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ M+ + PN Y MI LC+ G +LA M +++ +P++ T S+L+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 371 LKKNNQPCKANTIMALVQR 389
L + + +A + A ++R
Sbjct: 645 LGQEGKVEEAENLFAELER 663
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S+ +I FC++ ++ A+ + EM G+ P+ +TYT LI + KD + + L
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC PN+ T+NV I L + A +L +M GI P+ VTY +I G C++
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +A ++++ M+ + +PN Y ++I L QEG A + + + +P T
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 365 SALLE 369
++E
Sbjct: 674 VKMIE 678
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 79/153 (51%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I A C+MG + A+ + V+M+ G +P+V TYT LIS ++ GL++ M G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FPN T+N I LV RR A ++ LM R G P+ VTYN +IKG+C G A
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
V + ML R N Y T+I C G+ A
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F DM GC+ V + A + L S LK + L + + + +
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILK-VAIGLFHRMSRDGVFPNTVT 392
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I E + A++V+ M + G P+++TY +I + P+ + N M+
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G NL T+N I+ + + A +++ LM+ G +PDE +Y +I GFC+ ++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M+ L PN Y +I C++ + A + + + P+V T + L+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572
Query: 369 EGLKKNN 375
GL K N
Sbjct: 573 HGLTKQN 579
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 9/299 (3%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYG 145
S+ A AR +++ L + G R G +L + GM MD ++ M G
Sbjct: 157 SKEAMARTMSFLDMLSQ------SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ + NA + L + ++ + + +V E + D F++ +I C LD A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFES-EMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V +M K G +P+ +TY+TLI+ R L M+ G P T I
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A +L M+ G EP+ TY +I G C SG L +A ++ M + PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I+ L + A+++ + P++ T + +++G P KA +M
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I +C+ LD A ++ M++ G +P+V TY LI K N L +M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G FPN+ T+ I L + A ++ M G P+ +TY+ +I+ + G +
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A+ +++ + L+P+ Y MI G A+ +K P++ T L
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPHFS 395
++GLK N+ A+ +A + VP+ S
Sbjct: 712 IKGLK--NEYLLADQRLAALPDVVPNCS 737
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E ++ + ++ ++N++I + A + M + G+ P+V+TYT +I
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + ++N M+ +GC PNL T++ I+ L + + +A L ++R G+ PDE+
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TY +I+ + SG ++ A M+ P Y +I L E
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N VI A C+ G + A +M ++ + + PD TYT++I + + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M +GC PN T++ I L + R +A L+ M GI P T I
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G + A +++ M + PN Y +I LC G +A + + P+
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T +AL+ L +N + A ++ L+ R
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGR 418
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F M GC + + ++ ++ L + ++ + E+ E+ + D
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDE 670
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS-------------AFYK 233
++ +I+A+ G ++ A+ + M K G +P + TY LI A
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730
Query: 234 DNRPEIGNGLW-------NLMVCK--GCFPNLATF--NVRIQHLVNKRRSWQANKLMGLM 282
D P G ++M K P L+ N + +L R ++AN+L+G M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G+ PD+ YN ++ R ++D+A V+ M + + Y+ +I LCQ
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
A I ++ + + W P + L++GL ++
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 98/262 (37%), Gaps = 37/262 (14%)
Query: 104 EHQKSLPQGRREGFI------MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E + + R G I ++++ Y +G ++HA + M GC+ T+ + +
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 158 KVL---------------------------TESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K L T+ + + A L E+ +Q N
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ----N 768
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ G +A ++ M G+ PD Y +L+ + + ++ G++ M +
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC +L + I L R +A M PD+V ++I G R G+ D+
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888
Query: 311 KKVYSAMLGRRLMPNRKIYQTM 332
+ M RR MP+ IY +
Sbjct: 889 MEFLHIMETRRYMPSFHIYTIL 910
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 120/221 (54%), Gaps = 6/221 (2%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK--PDVITYTTLISA 230
L E E + DIF++N VI C+ G L+KA ++ EM + G K PD++TY TLI+A
Sbjct: 119 LFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178
Query: 231 -FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
KD E + + M G P++ T+N I L R +A +++ M P
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSP 235
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D VT+N ++ GFC++G L A +V M ++P+ Y +++ LC+ G +A+ +
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ +++ ++P V ++L++GL K+ + +A+ ++ + R
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 155/351 (44%), Gaps = 27/351 (7%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
+ +P++ +LF+ N + V + + + +S L + + LLE RR G
Sbjct: 110 DGNPDQAVKLFE-NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMI-----RRGG 163
Query: 117 FIMRIMMLYG--------KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
++ Y K G ++ A++ M L G V + N+ + L + +
Sbjct: 164 KSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAG--RV 221
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++A E+ + D+ +FN ++ FC+ G+L +A V+ EM + + PDVITYT L+
Sbjct: 222 VEA--AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 279
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL---------M 279
+ + + ++ L +V +G P++ + + L +A+KL +
Sbjct: 280 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREIL 339
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M + P TYN+V+ G + G + A + S ++ R +P+ Y T+I LC+
Sbjct: 340 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 399
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
A + + P+ T+ +++ GL + + A +++ + R+
Sbjct: 400 NRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK 450
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F++NIV+ + G + KA ++ ++ G PDV+TY TLI K NR L +
Sbjct: 351 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD 410
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GCFPN T + L R A L+ M R P+ V Y +I G C+S
Sbjct: 411 EMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 470
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A V AM G+ + + Y+ +I + G A M + + + ++P T
Sbjct: 471 RMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSK 530
Query: 366 ALLEGLKKNN 375
L E N+
Sbjct: 531 TLEEAAMSNS 540
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 11/243 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAGM+ A++ +M V + + L ++ L E+ + +I
Sbjct: 247 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP- 305
Query: 185 DIFSFNIVIKAFCEMGILDKAY---------LVMVEMQKLGVKPDVITYTTLISAFYKDN 235
D+ ++ ++ C+ G +++A+ ++ EM + + P + TY ++ KD
Sbjct: 306 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDG 365
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
L + +V +G P++ T+N I L R +A L M G P++VT
Sbjct: 366 SISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLG 425
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
V+ G CR G +D A + M +R PN +Y ++I LC+ + A ++ D+M+
Sbjct: 426 SVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL-DAMRG 484
Query: 356 NWV 358
V
Sbjct: 485 QGV 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F I+I+ C+ G +A + + + V PDV + LI +KD P+ L+
Sbjct: 61 NLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF 120
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVIK-GF 301
M P++ T+N I L +A +L+ M R G + PD VTYN +I G
Sbjct: 121 ENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGI 180
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G ++ A ++ M P+ Y ++IH LC G A + K + P +
Sbjct: 181 CKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILK---TMSCSPDL 237
Query: 362 DTISALLEGLKK 373
T + LL+G K
Sbjct: 238 VTFNTLLDGFCK 249
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%)
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
++ G K DV +Y L+ K ++ ++ GC PNL TF + I+ ++
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A + + + F + PD +N +I G + G+ D A K++ M R+ P+ Y T+
Sbjct: 79 TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
I LC+ G+ A + ++ +++ + D ++
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVT 171
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
SR AIQ F E+ + D+ S+N ++ + G + V ++ G P+++
Sbjct: 5 SRPDLAIQ-FFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLV 63
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T+ LI K + + P++ FN I L QA KL M
Sbjct: 64 TFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM 123
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML--GRRLMPNRKIYQTMIHY-LCQE 339
+ + PD TYN VI G C+SG+L+ A+++ M+ G + P+ Y T+I+ +C++
Sbjct: 124 ESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKD 183
Query: 340 GDFNLAYIMCKDSMK-KNWVPSVDTISALLEGLKKNNQPCKANTIM 384
GD A + D MK P V T ++++ L + +A I+
Sbjct: 184 GDVEEA-LEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 67/136 (49%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
++ ++N + LV ++ K+ + G P+ VT+ ++I+G C++G A +
Sbjct: 26 DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFL 85
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
A+ + P+ I+ +IH L ++G+ + A + ++ P + T + ++ GL K+
Sbjct: 86 RALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKS 145
Query: 375 NQPCKANTIMALVQRR 390
KA ++ + RR
Sbjct: 146 GNLEKARELLEEMIRR 161
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 9/263 (3%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME-VPEKFHIQF 184
GKAG+ + ++ F + + + NA L L L Q L+E V EK ++
Sbjct: 225 GKAGLRRRLVEGFIKSSTFNYRPFRNAFNAILHTL-----LTIEQYSLIEWVHEKMILEG 279
Query: 185 ---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D+ ++N+V++A +G LD+ + ++ EM + G+ PD+ TY L+ K ++P
Sbjct: 280 YSPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGDKPLAAL 339
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N M GC PN+ F I L M + G +PD V Y ++I +
Sbjct: 340 NLLNYMSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSY 399
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+G + A++ + ML R +PN Y +MI LC G+F+ A+ M KD P+
Sbjct: 400 VAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTPNF 459
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
S+L+ L+ + +AN ++
Sbjct: 460 SVYSSLVSRLRSAGKDTQANNVI 482
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 136/364 (37%), Gaps = 78/364 (21%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFY-DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
I RI++ G + A+D + L + + + ++ + R K F +
Sbjct: 110 IFRILLQDGPGFSARQALDEMRPKVSLELVREVLFRIVVSVDCVNRERYPKLAYKFFIWA 169
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN- 235
++ Q +N+V+K F E G + + + EM G+ T+ LI A K
Sbjct: 170 GQQEGYQHGTSMYNLVMKVFAECGEVKAMWRLFEEMMDKGLPVSSRTFHLLICASGKAGL 229
Query: 236 RPEIGNGL--------------------------------W--NLMVCKGCFPNLATFNV 261
R + G W M+ +G P++ T+NV
Sbjct: 230 RRRLVEGFIKSSTFNYRPFRNAFNAILHTLLTIEQYSLIEWVHEKMILEGYSPDVLTYNV 289
Query: 262 --RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL----------------------- 296
R ++++ K Q ++L+ M R G+ PD TYNL
Sbjct: 290 VMRAKYMLGKLD--QFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSD 347
Query: 297 ------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+I G R+G+L+ K + M+ + P+ Y MI G+F
Sbjct: 348 VGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEE 407
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKS 404
A D + + +P+V T ++++ GL + KA A+++ H + S + S
Sbjct: 408 AQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKA---FAMLKDMDSHGCTPNFSVYSS 464
Query: 405 ILSK 408
++S+
Sbjct: 465 LVSR 468
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 6/201 (2%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEV 176
+MR + GK +D +M G + + N L VL + + L A+ L+
Sbjct: 290 VMRAKYMLGKLDQFHRLLD---EMGRDGLTPDLHTYNLLLHVLGKGDKPLAALN--LLNY 344
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ F +I G L+ EM K G PDV+ YT +IS++
Sbjct: 345 MSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGE 404
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E ++ M+ +G PN+ T+N I+ L +A ++ M G P+ Y+
Sbjct: 405 FEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTPNFSVYSS 464
Query: 297 VIKGFCRSGHLDMAKKVYSAM 317
++ +G A V M
Sbjct: 465 LVSRLRSAGKDTQANNVIKYM 485
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+AG ++ F +M GC V + + + + Q F ++ + + +
Sbjct: 365 GRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEEAQRFFDDMLLRGQLP-N 423
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++N +I+ C +G DKA+ ++ +M G P+ Y++L+S + N +
Sbjct: 424 VYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTPNFSVYSSLVSRLRSAGKDTQANNVIK 483
Query: 246 LMVCKGCFPNLAT 258
M KG + +L +
Sbjct: 484 YMTDKGHYLHLLS 496
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 155/331 (46%), Gaps = 16/331 (4%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSR-------LAGARRFDYIEHLLEHQKSL 109
E+D +++ ++ K V+EN+ E TV L+ AR +E + E KS
Sbjct: 191 EKDDDRVAEMLK-------VMENE-GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK 242
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
F ++ Y +AG ++ A + F + G + + A + + ++A
Sbjct: 243 NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAA 302
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+ + ++ + + + FN +I +C ++DKA + + M+K+G++ DV TY TL
Sbjct: 303 EMLVTDMQVR-GVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLAC 361
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ NR + L +M+ KG PN ++ I N+ +A +L M G EP
Sbjct: 362 GLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEP 421
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
VTYN+++ G+ + G + A++ M + L+P+ Y ++H C G ++A +
Sbjct: 422 SLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLF 481
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
++ ++ P++ +AL+ GL K + +A
Sbjct: 482 EEMKQRGSKPNLVAYTALISGLAKEGRSEEA 512
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 145/359 (40%), Gaps = 52/359 (14%)
Query: 66 LFKANAHNRIVIENKYAFEDTVSRLAG---------------ARRFDYIEHLLEHQ-KSL 109
LF+A A + AFE TVSRL G A D LL+ S
Sbjct: 78 LFRAYADSGAAARAAEAFELTVSRLGGLDPRSLTSSLLSLRRAGHLDTAADLLKQAATSC 137
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK---------------------- 147
P ++ Y K+G + HA +M +G K
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197
Query: 148 -------------RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
TV + + L+ +RD+ ++A E+ K ++ D++ ++ VI
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVIN 256
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A+C G + +A V E G++P+ TY LI+ F K + E L M +G
Sbjct: 257 AYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 316
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N FN I K +A ++ +M++ GIE D TYN + G R+ +D AK +
Sbjct: 317 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 376
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ + + PN Y T+I C EGD A + ++ PS+ T + +++G K
Sbjct: 377 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 96/203 (47%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S ++V+ +C+ G + A ++ EM + GVK + + Y +L+ A+ ++ + + +
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P + T+ + + L R + + M+ + D Y+ VI +CR+G+
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +V+ +G + PN Y +I+ C+ G A ++ D + + +
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+++G + N KA I ++++
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEK 346
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 5/286 (1%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +SRLAGA D + +L +L F R + +A ++ F +
Sbjct: 106 FAAVLSRLAGAPP-DLLPPVL---SALRAAHLPAFSDRAFLPLLRALPPLPSLRLFLSLP 161
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+ +V+S NA L L +R L+ A P K +I D+ S NI++K + L
Sbjct: 162 SFNSHPSVRSFNALLHSLVAARRLRLAAALFRAAPTKLYITPDLVSCNILLKGLVGVRDL 221
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ EM G+ PDV+TYTT++SA+ + L++ ++ G P++ + V
Sbjct: 222 DAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVL 281
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I + A ++M M+ G++P+EVTY++VI+ C+ G A + MLG
Sbjct: 282 IDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGH 341
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
P+ + ++ +CQ+G A+ M + +KKN VP +TI+ L
Sbjct: 342 TPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKN-VPPDNTITNTL 386
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S N LK L RDL A L E+P + I D+ ++ V+ A+C L A + +
Sbjct: 207 SCNILLKGLVGVRDLDAALKVLDEMP-GWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDD 265
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
+ G PDV YT LI + + + + + + M G PN T++V I+ + +
Sbjct: 266 IIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGK 325
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
S +A LM M G PD V+ C+ G + A +++ M+ + + P+ I T
Sbjct: 326 SAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNT 385
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRR 390
+I++LC+ G A + D ++K + PS+ T ++L+ GL +N + +A + +V+RR
Sbjct: 386 LIYWLCKSGMVREARKLF-DELEKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERR 444
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 42/304 (13%)
Query: 122 MMLYGKAGM--IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
++L G G+ + A+ +M +G V + L DLK Q ++
Sbjct: 210 ILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAG 269
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK------ 233
+ D+ + ++I +C G + A +M EM+ GV+P+ +TY+ +I A K
Sbjct: 270 GRVP-DVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAE 328
Query: 234 -----------------------------DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
D + E + +W MV K P+ N I
Sbjct: 329 ACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIY 388
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L +A KL +++ G +P +TYN +I G C +G L A KV+ M+ RR P
Sbjct: 389 WLCKSGMVREARKLFDELEK-GYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEP 447
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N Y+ +I C+ G + + + + K PS L++ L ++P + +
Sbjct: 448 NAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSL---SEPIHDDIVD 504
Query: 385 ALVQ 388
+VQ
Sbjct: 505 NIVQ 508
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I PD V+ N+++KG LD A KV M G ++P+ Y T++ C + D A
Sbjct: 201 ITPDLVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQ 260
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ D + VP V + L++G + + A IM
Sbjct: 261 KLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIM 298
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A F M G + V + N+ + L L + E+ I ++ +F+
Sbjct: 271 IDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER-KINPNVVTFS 329
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T+N I+ +R + +L M + G+ + VTYN +I+G ++G DMA
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+K++ M+ + P+ Y ++ LC+ G A ++ + K P + T + ++EG
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 510 M------CKAGKV 516
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I +D++S+NI+I FC L A V+ +M KLG +PD++T ++L++ +
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TFN I L ++ +A L+ M + G +PD V
Sbjct: 162 HSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 221
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY V+ G C+ G +D+A + M ++ + IY T+I LC+ + A+ +
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P V T ++L+ L + A+ +++ +++R++
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKI 321
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + A + L + D+ + L ++ EK I+ D+ +N +I C+ +D
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHIDD 273
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ + +M+ G++PDV TY +LIS R + L + M+ + PN+ TF+ I
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALID 333
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPD---------------------------------- 290
V + + +A KL M + I+PD
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 291 -EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
VTYN +IKGFC++ ++ +++ M R L+ N Y T+I L Q GD ++A +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
K + P + T S LL+GL K + KA + +Q+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 104/205 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + DI + + ++ +C + A ++ +M ++G KPD +T+ TLI + N+
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 202
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV +GC P+L T+ + L + A L+ M++ IE D V YN +I
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A +++ M + + P+ Y ++I LC G ++ A + + +++
Sbjct: 263 DGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN 322
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P+V T SAL++ K + +A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 87/156 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK FC+ +++ + EM + G+ + +TY TLI ++ ++ ++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L + +A + +Q+ +EPD TYN++I+G C++
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ ++ ++ + + PN IY TMI C++G
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V + N +K +++ ++ E+ ++ + + ++N +I+ + G D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMA 449
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +M GV PD+ITY+ L+ K + E ++ + P++ T+N+ I+
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ + L + G++P+ + Y +I GFCR G + A ++ M +P+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 569
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y T+I ++GD + + K+ +V TIS ++ L
Sbjct: 570 SGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ MV P++ FN + + ++ L MQ I D +YN++I F
Sbjct: 66 GLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR L +A V M+ P+ ++++ C + A + ++ + P
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 185
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
T + L+ GL +N KA+ +ALV + V L + ++++
Sbjct: 186 VTFNTLIHGLFLHN---KASEAVALVDQMVQRGCQPDLVTYGAVVN 228
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M +GKAG A++ FY+M GC N + L + + L ++ K
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK- 399
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D ++NIVI G +KAY M++ PDV+TY TL++ K R +
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ M C P+L TF I L R A + + + G P+ YN +I G
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FCRSG +D +++ M+ P+ Y ++ + G ++A + ++ +++ P+
Sbjct: 520 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 579
Query: 361 VDTISALLEGLKKNNQPCKANTI 383
+ T + L+ L Q A T+
Sbjct: 580 LATYNVLIRSLSMAGQVEDAYTL 602
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L L +S+ L+ E E+ + D+F+++ ++ AF + G KA V MQK G
Sbjct: 307 LIALCKSKQLEEALTLFQEA-EQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAG 365
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
PD + Y LIS K + + L M KG P+ T+N+ I L + R +A
Sbjct: 366 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAY 425
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
G+M+R PD VTYN ++ G + D A ++ M + MP+ + T+I L
Sbjct: 426 SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 485
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ G A +K P+ +AL+ G ++ Q
Sbjct: 486 AKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQ 525
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 122/306 (39%), Gaps = 38/306 (12%)
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQ 170
G E + +G+AG + AM DM C+ + AA+ L E R ++
Sbjct: 50 GLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAM 109
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLIS 229
++ E D+ ++N +I +C+ G D+A + +++ G KP+ +++ TL+
Sbjct: 110 TLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVI 169
Query: 230 AFYKDNRPE---------IGNGL-WNLMVCK-------------------------GCFP 254
K +R +G GL ++ VC C
Sbjct: 170 FLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACAR 229
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+ T+ + + + + M L + G V YN +I+GF R G L A +++
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLF 289
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ + + +P+ Y +I LC+ A + +++ + V V T S L++ K
Sbjct: 290 ESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKA 348
Query: 375 NQPCKA 380
+ KA
Sbjct: 349 GRAAKA 354
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F +I + G ++ A + K+G P+ Y LIS F + + + G L+
Sbjct: 474 DLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELF 533
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ CFP+ T+ + + + + A +L+ M R G P TYN++I+ +
Sbjct: 534 QDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMA 593
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
G ++ A ++ M+ + P+ + Y +
Sbjct: 594 GQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 9/263 (3%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI----QAFLMEVPEKFH 181
G+AG+ + ++ F + + S NA L L I Q LME
Sbjct: 222 GQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMLMEGHSP-- 279
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D+ ++NIV++A +G LD+ + ++ EM K G+ PD+ TY L+ K ++P
Sbjct: 280 ---DVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKPLAAL 336
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N M GC P++ F I L M + G EPD V Y ++I G+
Sbjct: 337 NLLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGY 396
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+ L+ A+K++ ML R +PN Y TMI LC G+F+ A M KD + P+
Sbjct: 397 VAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKACSMLKDMDLRGCTPNF 456
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
S L+ L+ + +AN ++
Sbjct: 457 SVYSTLVCRLRNAGKDAEANNVI 479
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 84/235 (35%), Gaps = 46/235 (19%)
Query: 105 HQKSLPQGRRE-----GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
HQK L +G +MR + GK +D +M G + + N L V
Sbjct: 269 HQKMLMEGHSPDVLTYNIVMRAKYMLGKLDQFHRLLD---EMGKNGLTPDLHTYNILLHV 325
Query: 160 LTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
L + + L A+ L+ + F +I G L+ EM K G +
Sbjct: 326 LGKGDKPLAALN--LLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCE 383
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PDV+ YT +I+ + E L++ M+ +G PN+ T
Sbjct: 384 PDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYT-------------------- 423
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
YN +I+G C G D A + M R PN +Y T++
Sbjct: 424 ---------------YNTMIRGLCIVGEFDKACSMLKDMDLRGCTPNFSVYSTLV 463
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + GK A++ M GC +V + L+ + +L+A + F E+ +K
Sbjct: 322 LLHVLGKGDKPLAALNLLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKK- 380
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+ + ++I + L++A + +M G P+V TY T+I +
Sbjct: 381 GCEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKA 440
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+ M +GC PN + ++ + L N + +AN ++ M G
Sbjct: 441 CSMLKDMDLRGCTPNFSVYSTLVCRLRNAGKDAEANNVIKYMANKG 486
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+V+K F + G + + ++ EM + G+ T+ LI + + L +
Sbjct: 179 YNLVMKVFAQCGEVKAMWRLLEEMTENGLSISARTFHLLICTC---GQAGLRRRLVERFI 235
Query: 249 CKGCF---PNLATFNVRIQHLVNKRR----SWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
F P +FN + L+ + W K+ LM+ G PD +TYN+V++
Sbjct: 236 KSSSFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKM--LME--GHSPDVLTYNIVMRAK 291
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPS 360
G LD ++ M L P+ Y ++H L +GD LA + + M VPS
Sbjct: 292 YMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVL-GKGDKPLAALNLLNYMSDVGCVPS 350
Query: 361 VDTISALLEGLKK--NNQPCK 379
V + L++GL + N + CK
Sbjct: 351 VLHFTNLIDGLSRAGNLEACK 371
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG ++ F +M GC+ V + + +L+ Q ++ + + ++
Sbjct: 363 RAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLP-NV 421
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I+ C +G DKA ++ +M G P+ Y+TL+ + N +
Sbjct: 422 YTYNTMIRGLCIVGEFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNAGKDAEANNVIKY 481
Query: 247 MVCKGCFPNLAT 258
M KG + +L +
Sbjct: 482 MANKGQYLHLLS 493
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 135/260 (51%), Gaps = 1/260 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
++ + G+++ A + F M + +S N L L++S + + ++ F ++ I
Sbjct: 169 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIA 227
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+F++N++I C+ G L+ + + V+M+++G+ PDV+TY +LI + K E L
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M GC P++ T+N I + +A + M+ G++P+ VTY+ +I FC+
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + A K+ M L+PN Y ++I C+ G+ A+ + D ++ ++ T
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 364 ISALLEGLKKNNQPCKANTI 383
+ALL+GL K + +A +
Sbjct: 408 YTALLDGLCKAGRMIEAEEV 427
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
++LP+ R F++ + G +++ F DM G +V + N + L + DL
Sbjct: 190 RTLPKARSCNFLLHRLSKSGNGQLVRKF---FNDMIGAGIAPSVFTYNVMIDYLCKEGDL 246
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ + +++ E + D+ ++N +I + ++G L++ + EM+ +G PD+ITY
Sbjct: 247 ENSRRLFVQMRE-MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI+ + K + ++ M G PN+ T++ I + A KL+ M+R G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ P+E TY +I C++G+L A K+ + ML + N Y ++ LC+ G A
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + +K P+ +AL+ G K
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIK 452
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ I ++ ++I CE GI++ A M LG++P+V YT+LI +N E
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAK 600
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M C+G P++ F I + +A L+ M IE D Y ++ GF
Sbjct: 601 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+ G L A+K ++ M+ + ++P + ++ + G + A I K+ M++
Sbjct: 661 SQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA-IELKNEMER 713
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++ F E+G+L++A M+ P + L+ K ++ +N M+
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T+NV I +L + + +L M+ G+ PD VTYN +I G+ + G L+
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+++ M +P+ Y +I+ C+ A+ + P+V T S L+
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342
Query: 369 EGLKK 373
+ K
Sbjct: 343 DAFCK 347
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I A C+ G L +A+ ++ +M + GVK +++TYT L+ K R ++
Sbjct: 371 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G PN + + + R A K++ M I+PD + Y +I G C
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ K + M R + N I T+I + G + A ++ ++ T
Sbjct: 491 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 550
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHF 394
L++GL C+A +V+ V +F
Sbjct: 551 LIDGL------CEA----GIVELAVDYF 568
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I A+ + G A EMQ +GV+ ++TY LI + E+ + M+ G
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN+A + I L A KL MQ G+ PD + +I G + G+L A
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ S M + + +Y +++ Q G+ + A + ++K +P LL
Sbjct: 636 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 695
Query: 372 KKNNQ 376
K Q
Sbjct: 696 YKRGQ 700
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C F+V V +AN+ M+ F P + N ++ +SG+ + +
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K ++ M+G + P+ Y MI YLC+EGD + + + P V T ++L++G
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275
Query: 372 KK 373
K
Sbjct: 276 GK 277
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
P+ ++ +MR M+ ++G + A + F +M G TV + N + + ++ DL +
Sbjct: 242 PEAKQFNMLMRDMI---RSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
A L + K + D++++ ++ C+ G + A + EM++ GV P+ + +TTLI
Sbjct: 299 NA-LRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLID 357
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
A K+ G L M +G +L +N L R AN ++ M+ G++P
Sbjct: 358 AHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKP 417
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIM 348
D+VTY +I GFC+ G LDMA ++ M + + Y T+I L + G + I+
Sbjct: 418 DKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERIL 477
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQ 376
C + M+ P T + +++ KN+
Sbjct: 478 C-EMMEAGLEPDNTTYTMVIDAFCKNSD 504
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I+ A++ F +M G + + ++ A E+ + I+ D+
Sbjct: 326 KAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATR-GIKTDL 384
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N + C + L A ++ EM+ G+KPD +TYTTLI F K+ ++ +
Sbjct: 385 VAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQE 444
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G + T+ I L RS + +++ M G+EPD TY +VI FC++
Sbjct: 445 MSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSD 504
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ K+ M + P Y +++ C G A ++ + P T +
Sbjct: 505 VKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNI 564
Query: 367 LLEGLKKNNQ 376
LL+G K+ +
Sbjct: 565 LLDGHCKHGK 574
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 39/243 (16%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + ++ +M G K + + NA L RDLKA + E+ ++ D
Sbjct: 361 KEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM-RNNGLKPDK 419
Query: 187 FSFNIVIKAFCEMGILDKAY-----------------------------------LVMVE 211
++ +I FC+ G LD A ++ E
Sbjct: 420 VTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCE 479
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G++PD TYT +I AF K++ + G L M KG P + T+NV + +
Sbjct: 480 MMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQ 539
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A+ L+ M G+ PD++TYN+++ G C+ G + A+++ SA + ++ + +Y +
Sbjct: 540 MKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSA---KGMVSDFGLYTS 596
Query: 332 MIH 334
+I+
Sbjct: 597 LIN 599
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+AY +++ GV P+ + L+ + + +++ M+ +G P + TFN +
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ AN L GLM + G+ PD TY ++G C++G + A +++ M R +
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN ++ T+I C+EG+ + ++ + + +AL GL + AN I
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406
Query: 384 M 384
+
Sbjct: 407 V 407
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 16/331 (4%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSR-------LAGARRFDYIEHLLEHQKSL 109
E+D +++ ++ K V+EN+ E TV L+ AR +E + E KS
Sbjct: 115 EKDDDRVAEMLK-------VMENE-GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK 166
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
F ++ Y +AG ++ A + F + G + + A + + ++A
Sbjct: 167 NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAA 226
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+ + ++ + + + FN +I +C ++DKA + + M+K+G++ DV TY TL
Sbjct: 227 EMLVTDMQVR-GVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLAC 285
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ NR + L +M+ KG PN ++ I N+ +A +L M G EP
Sbjct: 286 GLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEP 345
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
VTYN+++ G+ + G + A++ + M + L+P+ Y ++H C G ++A +
Sbjct: 346 SLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLF 405
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
++ ++ P++ +AL+ GL K + +A
Sbjct: 406 EEMKQRGSKPNLVAYTALISGLAKEGRSEEA 436
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 145/359 (40%), Gaps = 52/359 (14%)
Query: 66 LFKANAHNRIVIENKYAFEDTVSRLAG---------------ARRFDYIEHLLEHQ-KSL 109
LF+A A + AFE TVSRL G A D LL+ S
Sbjct: 2 LFRAYADSGAAARAAEAFELTVSRLGGLDPRSLTSSLLSLRRAGHLDTAADLLKQAATSC 61
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK---------------------- 147
P ++ Y K+G + HA +M +G K
Sbjct: 62 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121
Query: 148 -------------RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
TV + + L+ +RD+ ++A E+ K ++ D++ ++ VI
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVIN 180
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A+C G + +A V E G++P+ TY LI+ F K + E L M +G
Sbjct: 181 AYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGI 240
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N FN I K +A ++ +M++ GIE D TYN + G R+ +D AK +
Sbjct: 241 NQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLL 300
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ + + PN Y T+I C EGD A + ++ PS+ T + +++G K
Sbjct: 301 RIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 359
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 96/203 (47%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S ++V+ +C+ G + A ++ EM + GVK + + Y +L+ A+ ++ + + +
Sbjct: 68 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P + T+ + + L R + + M+ + D Y+ VI +CR+G+
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +V+ +G + PN Y +I+ C+ G A ++ D + + +
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+++G + N KA I ++++
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEK 270
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 6/250 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIF 187
G + A+ TF M G T+ S NA + L +R L A++ F + FH ++
Sbjct: 131 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP--NLV 188
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++++VI C+ LD+A ++ M G +PD++ YT L+ F R + GL M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +GC P++ T+ V I L R A+++ + P+ VTY+ +I G+CR+ +
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D KV M R PN Y TMI L AY M ++ + +VP T L
Sbjct: 309 DEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Query: 368 LEGLKKNNQP 377
L+ + P
Sbjct: 366 KRALRMIDHP 375
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 127 KAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
K G + A D F M GC+ + NA + L + L A +A + E K D
Sbjct: 58 KLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEA-RKRDFAPD 116
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N ++ A ++G +D+A +M + G P ++++ +I+ + R ++N
Sbjct: 117 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 176
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ + PNL T++V I L + +A +L+ M G PD V Y ++ GF +G
Sbjct: 177 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 236
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A + M+ + +P+ Y +I LC+ G + A+ + ++ + P+V T S
Sbjct: 237 RLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYS 296
Query: 366 ALLEGLKKNNQPCKANTIM 384
AL+ G + ++ + +M
Sbjct: 297 ALIGGYCRASRVDEGGKVM 315
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 36/232 (15%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAY------------------------------- 206
E H Q D+ S+ +I C++G +D A+
Sbjct: 38 ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 97
Query: 207 -----LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
V+ E +K PDV+TY TL++A ++ R + + M +G P L +FN
Sbjct: 98 LDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 157
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L RR A ++ M P+ VTY++VI G C+S LD A+++ M+
Sbjct: 158 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ Y ++ G + A + + + + +P V T + +++ L K
Sbjct: 218 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK 269
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 188 SFNIVIKAFCEMGILDKA---YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +I+++ C G + +A + +E+ +PDV++YTTLI+ K R + L+
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAH--AQPDVVSYTTLINGLCKLGRVDAAFDLF 69
Query: 245 NLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV GC PN T+N + L + R A ++ ++ PD VTYN ++ +
Sbjct: 70 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQ 129
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +D A ++ M +P + +I LC+ A + + + +++ P++ T
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
S +++GL K++Q +A L+ R V L A+ ++
Sbjct: 190 YSVVIDGLCKSDQLDEAQQ---LLDRMVSEGCRPDLVAYTPLV 229
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 110/195 (56%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N +I + C++ ++++A+ + EM G+ PDV+TY+ LIS F +
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+N M+ + P++ TFN+ + + + + +M + GI+P+ VTYN ++ G+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C ++ AK +++ M + P+ + Y MI+ C+ F+ A + K+ +KN +P V
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 362 DTISALLEGLKKNNQ 376
T S+L++GL K+ +
Sbjct: 401 VTYSSLIDGLSKSGR 415
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 98/192 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI S++I+I FC++ D+A + EM + + PDV+TY++LI K R L
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P + T+N + L + +A L+ ++ GI+P+ TY+++IKG C+S
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+KV+ +L + N Y MI C EG FN A + +P T
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Query: 365 SALLEGLKKNNQ 376
++ L K ++
Sbjct: 544 EIIILSLFKKDE 555
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 7/248 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK---VLTESRDLKAIQAFLMEVPEKFHIQ 183
K ++ A D F +M G V + +A + +L + D AI F + E +I+
Sbjct: 237 KVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLND--AIDLFNKMILE--NIK 292
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+++FNI++ AFC+ G + + V M K G+KP+ +TY +L+ + +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M G P++ ++++ I ++ +A L M R I PD VTY+ +I G +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG + A ++ M R + P + Y +++ LC+ + A + K P++ T
Sbjct: 413 SGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472
Query: 364 ISALLEGL 371
S L++GL
Sbjct: 473 YSILIKGL 480
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 36/253 (14%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N L L +S+ + +L + E I+ ++ + NI+I FC++G++ A+ V ++
Sbjct: 88 FNKILGSLVKSKHYHTV-LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 213 QKLGVKPDVITYTTLISA-----------FYKDNRPEIG------------NGLWNLMVC 249
K+G PD IT+TTLI + D +G +GL +
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 250 KGCF------------PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ PN+ +N I + + +A L M GI PD VTY+ +
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I GFC G L+ A +++ M+ + P+ + +++ C++G + MK+
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 358 VPSVDTISALLEG 370
P+ T ++L++G
Sbjct: 327 KPNFVTYNSLMDG 339
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDIFSF 189
AM+ F +MH V + ++ + L++S + ++ +++ ++ H + I ++
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI----SYALQLVDQMHDRGVPPTIRTY 438
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N ++ A C++ +DKA ++ +++ G++P++ TY+ LI + + E ++ ++
Sbjct: 439 NSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLV 498
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG N+ T+ + IQ + +A L+ M+ G PD TY ++I + DM
Sbjct: 499 KGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558
Query: 310 AKKVYSAMLGRRLMPNR 326
A+K+ M+ R + P +
Sbjct: 559 AEKLLREMIARGVRPRQ 575
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G I +A+ MH G T+++ N+ L L + + A L ++ +K IQ ++
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK-GIQPNM 470
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++++I+IK C+ G L+ A V + G +V TYT +I F + L +
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
M GC P+ T+ + I L K + A KL+ M G+ P ++
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F FN ++ + + + +M+ G+KP+++ LI+ F + ++
Sbjct: 86 FEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAK 145
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
++ G P+ TF I+ L K + QA + G D+++Y +I G C+ G
Sbjct: 146 ILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A + + G + PN +Y T+I +C+ N A+ + + + K P V T SA
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSA 265
Query: 367 LLEGL 371
L+ G
Sbjct: 266 LISGF 270
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
K + I+Y++ + F+ +N + L+N ++ + P FN + LV +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L M+ GI+P+ V N++I FC+ G + A V++ +L +P+ + T+I LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166
Query: 338 QEGDFNLAYI 347
+G A++
Sbjct: 167 LKGQIQQAFL 176
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 3/263 (1%)
Query: 131 IKHAMDTFYD-MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--HIQFDIF 187
+ AMD M +GC V S N LK L + ++ L + E + ++
Sbjct: 141 VDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVV 200
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C+ +D+A V+ M GVK DV+TY+T+I K + G+ M
Sbjct: 201 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHM 260
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ KG P++ T+N I L + +A ++ M G++PD VTYN +I G C++ +
Sbjct: 261 IDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 320
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A V M+ + + P+ + Y +IH G++ ++ + P V T S L
Sbjct: 321 DRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLL 380
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
L+ L KN + +A I + R+
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRK 403
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 100/187 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I A C++G +D A L +M GV P+ + + +L+ +R E L+
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G PN+ FN + +L N+ + A +L+ M+R G+ P+ ++YN +I G C +
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A ++ M+ L P+ Y T++ C+ G + AY + ++ ++K P T
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657
Query: 365 SALLEGL 371
S +L+GL
Sbjct: 658 STILQGL 664
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 4/243 (1%)
Query: 131 IKHAMDTFYDMHLYG---CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
++ A++ + M G C V + N + L +++ + + L + +K ++ D+
Sbjct: 177 VEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK-GVKLDVV 235
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I C+ +D+A V+ M GVKPDV+TY T+I K + G+ M
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ KG P++ T+N I L + +A+ ++ M ++PD TYN +I G+ +G
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ M R L P+ Y ++ YLC+ G A + ++K P+V L
Sbjct: 356 KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415
Query: 368 LEG 370
L G
Sbjct: 416 LHG 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+++H +D G K V + + + L +++ + + L + +K ++ D+ +
Sbjct: 220 GVLQHMIDK-------GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK-GVKPDVVT 271
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I C+ +D+A V+ M GVKPDV+TY T+I K + +G+ M+
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
K P++ T+N I ++ + + + M G++PD VTY+L++ C++G
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A+K++ M+ + + PN IY ++H G
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A + F++M G + V N + L + Q L++ E+ ++ ++ S+N
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR-LIDSMERVGVRPNVISYNT 589
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I C G D+A ++ M +G+KPD+I+Y TL+ + K R + L+ M+ KG
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P T++ +Q L + RR +A +L M + G + D TYN+++ G C++ +D A
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
K++ ++ + L PN + MI L + G
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGG 738
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 120/256 (46%), Gaps = 3/256 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEK 179
++ Y K MI AM F M +G V + + L + R A+ F + +
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ + FN ++ C + +KA + EM GV+P+V+ + T++ + + +
Sbjct: 510 --VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L + M G PN+ ++N I R+ +A +L+ +M G++PD ++Y+ +++
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G+C++G +D A ++ ML + + P Y T++ L F+ A + + +K
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQW 687
Query: 360 SVDTISALLEGLKKNN 375
+ T + +L GL K N
Sbjct: 688 DIYTYNIILNGLCKTN 703
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 5/292 (1%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
+ + L A+ D E +L+H + +G + + ++ G KA + A
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHM--IDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQ 293
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M G K V + N + L +++ + L + +K ++ DI ++N +I +
Sbjct: 294 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK-DVKPDIQTYNCLIHGYLST 352
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + + EM G+ PDV+TY+ L+ K+ + ++ M+ KG PN+ +
Sbjct: 353 GEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIY 412
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
+ + + L+ LM GI P+ +N+V+ + + +D A ++S M
Sbjct: 413 GILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ 472
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
L P+ Y +I LC+ G + A + + P+ ++L+ GL
Sbjct: 473 HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 142/342 (41%), Gaps = 13/342 (3%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG--FIMRIMMLYGKAGM 130
N V N F V L R++ E L QG R F IM G
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM--WDQGVRPNVVFFNTIMCNLCNEGQ 564
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKV-LTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A M G + V S N + R +A Q L++V ++ D+ S+
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ--LLDVMVSVGLKPDLISY 622
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+ +++ +C+ G +D AY + EM + GV P +TY+T++ + R L+ M+
Sbjct: 623 DTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G ++ T+N+ + L +A K+ + + P+ +T+ ++I + G
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG---DFNLAYIMCKDSMKKNWVPSVDTISA 366
A +++++ L+PN Y M+ + QEG +F+ ++ + K P ++A
Sbjct: 743 AMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAME---KSGCTPDSVMLNA 799
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
++ L + +A ++ + ++ S S+ S+
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 45/206 (21%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLM------------------VCK-------- 250
V+PD+ TY+ L F + R E G + L+ +C
Sbjct: 86 VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145
Query: 251 ----------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG---IEPDEVTYNLV 297
GC PN+ + N ++ L N++R +A +L+ M G P+ VTYN +
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C++ +D A+ V M+ + + + Y T+I LC+ + A + + + K
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P V T + +++GL CKA +
Sbjct: 266 KPDVVTYNTIIDGL------CKAQAV 285
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I +A F +M G + + L+ L +R + + + + Q+
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ-QW 687
Query: 185 DIFSFNIVIKAFCEMGILDKAY------------------LVMVE--------------- 211
DI+++NI++ C+ +D+A+ +M++
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747
Query: 212 --MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+ G+ P+V+TY ++ ++ + + L+ M GC P+ N I+ L+ +
Sbjct: 748 ASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGR 807
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+A + + + T +L+I F R + + AK +
Sbjct: 808 GEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
IK+A M GC + + N +K D K + + ++ H ++ ++N
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH-SANLVTYN 464
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+IK +C+ G A ++ M+ G KPD +YT LI F K ++ E GL+N MV
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN T+ I + A L+ M+R G P+ TYN++I G + + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ M+ + PN Y MI LC+ G +LA M +++ +P++ T S+L+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 371 LKKNNQPCKANTIMALVQR 389
L + + +A + A ++R
Sbjct: 645 LGQEGKVEEAENLFAELER 663
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S+ +I FC++ ++ A+ + EM G+ P+ +TYT LI + KD + + L
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC PN+ T+NV I L + A +L +M GI P+ VTY +I G C++
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +A ++++ M+ + +PN Y ++I L QEG A + + + +P T
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 365 SALLEG 370
++E
Sbjct: 674 VKMIEA 679
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 79/153 (51%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I A C+MG + A+ + V+M+ G +P+V TYT LIS ++ GL++ M G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FPN T+N I LV RR A ++ LM R G P+ VTYN +IKG+C G A
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
V + ML R N Y T+I C G+ A
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F DM GC+ V + A + L S LK + L + + + +
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK-VAIGLFHRMSRDGVFPNTVT 392
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I E + A++V+ M + G P+++TY +I + P+ + N M+
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G NL T+N I+ + + A +++ LM+ G +PDE +Y +I GFC+ ++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M+ L PN Y +I C++ + A + + + P+V T + L+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572
Query: 369 EGLKKNN 375
GL K N
Sbjct: 573 HGLTKQN 579
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 9/299 (3%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYG 145
S+ A AR +++ L + G R G +L + GM MD ++ M G
Sbjct: 157 SKEAMARTMSFLDMLSQ------SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ + NA + L + ++ + + +V E + D F++ +I C LD A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFES-EMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V +M K G +P+ +TY+TLI+ R L M+ G P T I
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A +L M+ G EP+ TY +I G C SG L +A ++ M + PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I+ L + A+++ + P++ T + +++G P KA +M
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I +C+ LD A ++ M++ G +P+V TY LI K N L +M
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G FPN+ T+ I L + A ++ M G P+ +TY+ +I+ + G +
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A+ +++ + L+P+ Y MI G A+ +K P++ T L
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPHFS 395
++GLK N+ A+ +A + VP+ S
Sbjct: 712 IKGLK--NEYLLADQRLAALPDVVPNCS 737
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E ++ + ++ ++N++I + A + M + G+ P+V+TYT +I
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + ++N M+ +GC PNL T++ I+ L + + +A L ++R G+ PDE+
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TY +I+ + SG ++ A M+ P Y +I L E
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N VI A C+ G + A +M ++ + + PD TYT++I + + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M +GC PN T++ I L + R +A L+ M GI P T I
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G + A +++ M + PN Y +I LC G +A + + P+
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T +AL+ L +N + A ++ L+ R
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGR 418
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F M GC + + ++ ++ L + ++ + E+ E+ + D
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDE 670
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS-------------AFYK 233
++ +I+A+ G ++ A+ + M K G +P + TY LI A
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 730
Query: 234 DNRPEIGNGLW-------NLMVCK--GCFPNLATF--NVRIQHLVNKRRSWQANKLMGLM 282
D P G ++M K P L+ N + +L R ++AN+L+G M
Sbjct: 731 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G+ PD+ YN ++ R ++D+A V+ M + + Y+ +I LCQ
Sbjct: 791 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 850
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
A I ++ + + W P + L++GL ++
Sbjct: 851 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 98/262 (37%), Gaps = 37/262 (14%)
Query: 104 EHQKSLPQGRREGFI------MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E + + R G I ++++ Y +G ++HA + M GC+ T+ + +
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 158 KVL---------------------------TESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K L T+ + + A L E+ +Q N
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ----N 768
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ G +A ++ M G+ PD Y +L+ + + ++ G++ M +
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC +L + I L R +A M PD+V ++I G R G+ D+
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888
Query: 311 KKVYSAMLGRRLMPNRKIYQTM 332
+ M RR MP+ IY +
Sbjct: 889 MEFLHIMETRRYMPSFHIYTIL 910
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 52/279 (18%)
Query: 167 KAIQAFLM-EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K AFL+ E + H+ D+F++ I+I +FC++G+L +A EM + G P+V+TYT
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF-------------------------- 259
LI A+ K + N L+ +M+ +GC PN+ T+
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614
Query: 260 ---------------NVR----------IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N+R + L + +A L+ +M G EP+ + Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I GFC+ G LD A+ V++ M R PN Y ++I L ++ +LA + ++
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ P+V + +++GL K + +A +M++++ + H
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V L A KV E+RDL + + +E E HI +D +I FC++G LD+A +V
Sbjct: 643 VDGLCKAHKV-KEARDLLDVMS--VEGCEPNHIVYDA-----LIDGFCKVGKLDEAQMVF 694
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M + G P+V TY++LI +KD R ++ + + M+ C PN+ + I L
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++ +A +LM +M+ G P+ VTY +I GF ++G +D ++ M + PN Y
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ +I++ C G + A+ + D MK+ + P
Sbjct: 815 RVLINHCCAAGLLDDAHQLL-DEMKQTYWP 843
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI C +D A+L+ EM+ V PDV TYT LI +F K + +
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV GC PN+ T+ I + R+ AN+L +M G P+ VTY +I G C+S
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIY 329
G ++ A ++Y+ M G +P+ +Y
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMY 623
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-MEVPEKFHIQFD 185
+A + + AMD M C V + L R L + L M + E +
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD----------- 234
IF N +I A+C G AY ++ +M G +P + Y LI +
Sbjct: 371 IF--NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428
Query: 235 ---------------NRPEIGN---------------GLWNLMVCKGCFPNLATFNVRIQ 264
N+ + N + M+ KG P+ +T++ I
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L N + A L M+ + PD TY ++I FC+ G L A+K + M+ P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N Y +IH + + A + + + + +P+V T +AL++G K+ Q KA I
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 385 A 385
A
Sbjct: 609 A 609
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+ A++ + G K + + NA ++V E+ L E+ + D ++
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS-GFNMDGYT 269
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ C+ G +A L ++E ++ K D + YT +IS + + E + M
Sbjct: 270 LGCFVHLLCKAGRWREA-LALIEKEEF--KLDTVIYTQMISGLCEASLFEEAMDFLSRMR 326
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH-- 306
C PN+ T+ + + + KR+ + +++ +M G P +N +I +CRSG
Sbjct: 327 SSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYS 386
Query: 307 ---------------------------------------LDMAKKVYSAMLGRRLMPNRK 327
L++A+K Y ML ++ N+
Sbjct: 387 YAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ LC G F AY + ++ M K ++P T S ++
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 37/257 (14%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS--FNIVIKAFCEMGILDKAYLVMVE 211
+A L+VL + + + FL E+ ++ +I N++I+ C G+ + A +
Sbjct: 166 HALLEVLGCGGNDRVPEQFLREIRDE---DKEILGKLLNVLIRKCCRNGLWNVALEELGR 222
Query: 212 MQKLGVKPDVITYTTLISAFYKDNR--------PEIGNGLWNL-MVCKGCFPNL------ 256
++ LG KP +TY L+ F + +R E+ + +N+ GCF +L
Sbjct: 223 LKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR 282
Query: 257 -----------------ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ I L +A + M+ P+ VTY +++
Sbjct: 283 WREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLC 342
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G R L K++ S M+ P+R+I+ ++IH C+ GD++ AY + K P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 360 SVDTISALLEGLKKNNQ 376
+ L+ G+ N +
Sbjct: 403 GYVVYNILIGGICGNEK 419
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+FNI+I A C+ G LD+A+ ++ M G PDV+TY+TLIS R + L
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV + C P + T N I L R +A +++ M G PD VTYN ++ G CR+G
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A+++ S M+ R L PN Y ++ LC+ A + P++ T +A
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435
Query: 367 LLEGLKKNNQ 376
L+ G Q
Sbjct: 436 LILGFCSAGQ 445
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 72 HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAG 129
+ R V + +++ + LA A + + +L QK L G + +++G A
Sbjct: 2 NERNVSPDSWSYGILIDGLAKAGKLNDARNLF--QKLLHSGVTPSTVAYTSLIHGLCMAN 59
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
A + F DM+ GC + + N + + L+ + ++ E H+ D+ ++
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP-DVVTY 118
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N V+ C+ +++A L+ EM++LG P+ ++ T+I + ++ + +++ M
Sbjct: 119 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K P+ ++ + I L + +A KL M GI P VTYN+VI G C + LD
Sbjct: 179 KDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +++ +M + P+R + +I C+ G + A+ + K VP V T S L+
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 370 GL 371
GL
Sbjct: 299 GL 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 13/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAA-LKVLTESRDLKAIQAF-LMEVPEKFHIQF 184
K+ ++ A+ F +M GC +S N L + +S+ +A Q F ME + I
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD---IPP 183
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS----AFYKDNRPEIG 240
D +S+ I+I + G L++AY + M G+ P +TY +I A+ D E
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE-- 241
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M KGC P+ TFN+ I + + +A +L+ M G PD VTY+ +I G
Sbjct: 242 --LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C +D A+ + M+ R+ P T+IH LC+ G A + + P
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 361 VDTISALLEGLKKNNQPCKANTIMA 385
V T + L+ G + Q +A +++
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLS 384
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E K + + + N +I C+ G + +A V+ M G PDV+TY TL+
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + E L + MV +G PN+ T+ + L R +A + M+ G P+
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
TY +I GFC +G +D K++ M+ + P+ +Y T+ LC+ G
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K GM++ A D M G V + N + L +S ++ E+ E+ +
Sbjct: 92 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLGCTPNR 150
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S N +I C+ +D+A V EM+ + PD +Y LI K + L+
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQR 210
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+NV I + +A +L M+ G P T+N++I C+ G
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A ++ M +P+ Y T+I LC + A + +D +K+ P+V T +
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 367 LLEGLKKNNQPCKANTI 383
L+ GL CKA I
Sbjct: 331 LIHGL------CKAGRI 341
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D +S+ I+I + G L+ A + ++ GV P + YT+LI N +
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +GC P+ T+NV I + +A L+ M G PD VTYN V+ G
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+S ++ A +++ M PNR+ + T+I LCQ+ + A + + K+ P
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR 389
+ L++GL K K N L QR
Sbjct: 185 SWSYGILIDGLAKAG---KLNEAYKLFQR 210
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F M GC+ + + N + + L L + + H+ D+ +++
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVP-DVVTYS 294
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C + +D A ++ +M K KP V+T TLI K R + + + MV
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T+N + ++ +A +L+ M G+ P+ VTY ++ G C++ L A
Sbjct: 355 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
V++ M PN Y +I C G +
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 17/273 (6%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHA 134
+ + + +S L R D HLLE + + + + + +++G KAG IK A
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDM--VKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ M G V + N + + + + L ++ + + ++ ++ ++
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVS 403
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C+ L +A V +M+ G P++ TYT LI F + + G L+ MVC G P
Sbjct: 404 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP-------DEVTYNLVIKGFCRSGHL 307
+ + L RS +A +++ R G E DEV Y + G +G +
Sbjct: 464 DHVVYGTLAAELCKSGRSARALEIL----REGRESLRSEAWGDEV-YRFAVDGLLEAGKM 518
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+MA M+ +P + +++ LC+ G
Sbjct: 519 EMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + V PD +Y LI K + L+ ++ G P+ + I L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A +L M R G P VTYN++I C+ G L+ A + M+ +P+ Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL---KKNNQPCK 379
++ LC+ A ++ + + P+ + + ++ GL K +Q C+
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 171
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F +I A C++G +D A L +M GV P++ + +L+ ++ E +
Sbjct: 412 DVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY 471
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P++ FN + +L K + +A +L+ LM+R G PD ++Y +I G C
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLV 531
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K ML L P+ Y T++H C+ G + AY + ++ ++ P V T
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 365 SALLEGL 371
S +L GL
Sbjct: 592 STILHGL 598
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 5/237 (2%)
Query: 109 LPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYD-MHLYGCKRTVKSLNAALK-VLTESR 164
L G R I+ +L G A ++ AMD M GC V S N LK E R
Sbjct: 121 LKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKR 180
Query: 165 DLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+A++ +M + ++ S+ VI F G +DKAY + +EM G++P+V+T
Sbjct: 181 AEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVT 240
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
YTT+I K + G++ M+ KG P+ T+N I ++ + + +++ M
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G++PD TY ++ C +G A+ + +M+ + + PN IY +IH +G
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKG 357
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 3/249 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G ++H TF + G + +N LK L +++ L+ L++ +
Sbjct: 104 FCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTP 163
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D+ S+N ++K FC ++A + M + Q P+V++Y T+I+ F+ + + +
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAY 223
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M+ +G PN+ T+ I L + +A + M G++PD TYN +I G+
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G ++ M L P+ Y ++++YLC G A ++K P+V
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343
Query: 362 DTISALLEG 370
L+ G
Sbjct: 344 AIYGILIHG 352
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 190 NIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N ++K C+ L +A ++++ M +LG PDV++Y TL+ F + R E L ++M
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 249 ---CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ C PN+ ++ I + + +A L M GI+P+ VTY VI G C++
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A+ V+ M+ + + P+ Y +IH G + M ++ P T
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312
Query: 366 ALLEGLKKNNQPCK 379
+LL L NN C+
Sbjct: 313 SLLNYL-CNNGRCR 325
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A + F +M G + V + + L +++ + + ++ +K ++ D +
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDT 275
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I + +G + ++ EM G+KPD TY +L++ + R ++ M+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN+A + + I K + + L+ LM G+ PD +N++ + + +D
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M + L P+ + +I LC+ G + A + M + P++ ++L+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 369 EGL 371
GL
Sbjct: 456 YGL 458
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 35/225 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL- 243
D +++N ++ +C G +D AY V EM + G+ P V+TY+T++ + R L
Sbjct: 552 DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELY 611
Query: 244 ---------WNLMV------------------------CKGCFP-NLATFNVRIQHLVNK 269
WN+ + C F + TFN+ I L
Sbjct: 612 LNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS 671
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R+ A L + +G+ PD TY L+ + G+L+ ++SAM PN ++
Sbjct: 672 GRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
++ L GD A +KN+ T + L+ L ++
Sbjct: 732 NALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRD 776
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
M+ + V PD+ TY+ LI F + R E G + L++ G N N ++ L +
Sbjct: 82 MIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141
Query: 269 KRRSWQA-NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---GRRLMP 324
+R +A + L+ M G PD V+YN ++KGFC + A ++ M GR P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
N Y T+I+ EG + AY + + M + P+V T + +++GL CKA +
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGL------CKAQVV 254
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
Query: 123 MLYGKAGMIK--HAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEK 179
++YG + K A + +++M G + V N L + T+ + +KA + L+++ E+
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR--LIDLMER 511
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ D+ S+ +I C +G +D+A + M +G+KPD TY TL+ + + R +
Sbjct: 512 VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
G++ M+ G P + T++ + L RR +A +L M G + + YN+++
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G ++ +D A K++ ++ + + MI L + G A + VP
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 360 SVDTISALLEGL 371
V T + E L
Sbjct: 692 DVFTYCLIAENL 703
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ ++ C G +A M + G+KP+V Y LI + + L
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
NLMV G P+ FN+ K +A + M++ G+ PD V + +I C+
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL 426
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M+ + PN ++ ++++ LC + A + + + P V
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ +L L Q KA ++ L++R
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMER 511
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F M G + N+ + L + + F E+ + I+ D+
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-GIRPDV 483
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN ++ C G + KA ++ M+++G +PDVI+YTTLI R + ++
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV 543
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+N + R A + M R GI P VTY+ ++ G +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
AK++Y M+ N IY +++ L + + A+ + + K++ + T +
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
++ L K+ + A + A +
Sbjct: 664 MIGALFKSGRNEDAMHLFATIS 685
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 7/292 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG---KAGMIKHAMDTF 138
F + L RRFD + + +++ Q + +L G + G ++ AM +
Sbjct: 229 TFNSVLKGLCKHRRFDKAKEVF---RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFY 285
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G V S + + + + + A+L E+ + + D + +VI FC
Sbjct: 286 KEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM-KGLGLVPDGVIYTMVIGGFCR 344
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G + +A V EM LG PDV+TY TL++ K +R L N M +G P+L T
Sbjct: 345 AGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCT 404
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
F I +A +L + + PD V YN +I G CR G L A +++ M
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
R + PN Y +I C++G A+ + + K +P++ T +++++G
Sbjct: 465 AREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKG 516
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 15/301 (4%)
Query: 67 FKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL---PQGRREGFIMRIMM 123
F R V + +F + + + D+ L K L P G ++ M+
Sbjct: 284 FYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG-----VIYTMV 338
Query: 124 LYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ G +AG + A+ +M GC V + N L L + L + L E+ E+
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER-G 397
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D+ +F +I +C G +KA + + ++PDV+ Y +LI + N
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW+ M + FPN T+++ I K + +A + M G P+ +TYN +IKG+
Sbjct: 458 ELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQE---GDFNLAYIMCKDSMKKNW 357
CRSG++ ++ M+ ++P+ + T+IH Y+ +E G FN+ IM K+ ++ +
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDA 577
Query: 358 V 358
V
Sbjct: 578 V 578
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ + ++ NI++ ++C+ DKA V+ EM+K V PDV+T+ LI A ++ +
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + M KG P + TFN ++ L RR +A ++ M + + PD ++N++I GFC
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273
Query: 303 RSGHLDMAKKVYSAML-----------------------------------GRRLMPNRK 327
R G ++ A K Y M G L+P+
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
IY +I C+ G + A + + + +P V T + LL GL K ++ A ++ +
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393
Query: 388 QRR 390
+ R
Sbjct: 394 KER 396
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I +FN V+K C+ DKA V M + V PDV ++ LI F + E +
Sbjct: 227 IVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYK 286
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G P++ +F+ I + + A + M+ G+ PD V Y +VI GFCR+G
Sbjct: 287 EMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A +V M+G +P+ Y T+++ LC++ A + + ++ P + T +
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406
Query: 366 ALLEGLKKNNQPCKA 380
L+ G ++ KA
Sbjct: 407 TLIHGYCRDGNFEKA 421
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I + CE G +++A+ + EM G P+++TY ++I + + + G M
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ P+L TFN I + + A + +M++ ++PD VTYN++I GF G++
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ A +V+ M + P+R Y ++I+ G+ A+ + + M + + P
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N ++ C+ L A ++ EM++ GV PD+ T+TTLI + +D E L+
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++ + P++ +N I + K +AN+L M I P+ VTY+++I C
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A M+ + +PN Y ++I C+ G+ + M+ N +P + T
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545
Query: 365 SALLEG-LKKNN 375
+ L+ G +K+ N
Sbjct: 546 NTLIHGYIKEEN 557
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
FL E+ K ++ +I ++N +IK +C G + K + +M + + PD+IT+ TLI
Sbjct: 493 GFLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ K+ ++N+M + P+ T+N+ I + +A ++ M GIEPD
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPD 611
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
TY +I G +G+ A +++ M+ R P+ K
Sbjct: 612 RYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
EK ++ DI+++N + C + LD+A ++ M ++GV P+ +TYTTLIS KD
Sbjct: 170 EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDM 229
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L+ M KG P++ T+NV I K +A + M++ G PD TY +
Sbjct: 230 VEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASL 289
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C +G +D+A K++ M R PN Y +I L +EG A+ + D +K
Sbjct: 290 VHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGL 349
Query: 358 VPSVDTISALLEGLKKNNQ 376
+P SAL+ L +N+
Sbjct: 350 IPDDSLYSALVGSLHTDNR 368
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 103/250 (41%), Gaps = 12/250 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G + A DM +G N+ L +D +Q L E+ E
Sbjct: 26 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL-EIME-------- 76
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
N I+A G V+ E GV+P+ TY LI+ F K + E L
Sbjct: 77 ---NEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLAD 133
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N FN I K A K+ M++ G+E D TYN + G CR
Sbjct: 134 MQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNR 193
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD AK + M+ ++PN Y T+I C++GD A + ++ +K PSV T +
Sbjct: 194 LDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNV 253
Query: 367 LLEGLKKNNQ 376
++ G K
Sbjct: 254 MIHGYAKKGS 263
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
+GC+ V S NA L+ L +R +Q LME +I +F+ +I C G+ +
Sbjct: 211 FGCEPDVVSYNAVLRGLCMARRWGHVQD-LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFE 269
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+ + V +M + G PDV Y T+I K+ R E+ G+ N M G PN+ +N +
Sbjct: 270 RVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLL 329
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ L + R +A L+ M D+VT+N+++ C++G +D +V ML M
Sbjct: 330 KGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCM 389
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y T+I+ C+EG + A ++ + P+ + + +L+GL + A +
Sbjct: 390 PDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEEL 449
Query: 384 MA-LVQRRVP 392
M+ ++Q+ P
Sbjct: 450 MSQMIQQGCP 459
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M YG V N LK L + + + L E+ +K D +FNI++ C+ G
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK-DCPLDDVTFNILVDFLCQNG 371
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++D+ V+ +M + G PDVITYTT+I+ F K+ + L M GC PN ++
Sbjct: 372 LVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYT 431
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ ++ L + R A +LM M + G P+ VT+N +I C+ G ++ A ++ ML
Sbjct: 432 IVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 491
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV---DTISALLEGLKKNNQ 376
P+ Y T+I L + G+ + A + +KK P+ +I++ L G + N+
Sbjct: 492 GCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINK 550
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A+ DM GC T + L+ + + L ++ + D+ +
Sbjct: 125 GRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGR-GCALDVGN 183
Query: 189 FNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
N+V++A C+ G +D+A ++ ++ G +PDV++Y ++ R L M
Sbjct: 184 CNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEM 243
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V GC PN+ TF+ I HL + +++ M G PD Y +I G C+ L
Sbjct: 244 VAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERL 303
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-----QEGDFNLAYIMCKD 351
++A+ + + M L PN Y T++ LC +E + LA + KD
Sbjct: 304 EVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +LEH G I ++ G K G+I A+ M GC+
Sbjct: 375 RVIEVLEQMLEH------GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTV 428
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + + + ++ ++ + +FN +I C+ G++++A ++ +
Sbjct: 429 SYTIVLKGLCSAERWVDAEELMSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + L N+MV KG PN ++ L + R
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +Q + D V YN VI C+ G D A + + M+ +PN Y
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 608 LIRGLASEG 616
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 127/289 (43%), Gaps = 11/289 (3%)
Query: 90 LAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYG---KAGMIKHAMDTFYDMHLY 144
L ARR+ +++ L+E P I+ L G + G+ + + M +
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPN-----IVTFSTLIGHLCRNGLFERVHEVHAQMAEH 281
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC V+ + + + L+ + L +P + + ++ +N ++K C ++
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMP-SYGLSPNVVCYNTLLKGLCSADRWEE 340
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ EM D +T+ L+ ++ + + M+ GC P++ T+ I
Sbjct: 341 AEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVIN 400
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ +A L+ M G P+ V+Y +V+KG C + A+++ S M+ + P
Sbjct: 401 GFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP 460
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
N + T+I++LC++G A + K + P + + S +++GL K
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 509
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 1/247 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G++ ++ M +GC V + + + L L+ + + S
Sbjct: 371 GLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK-EGLIDEAVMLLRSMAACGCRPNTVS 429
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ IV+K C A +M +M + G P+ +T+ TLI+ K E L M+
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P+L +++ I L + +A +L+ +M + G+ P+ + Y+ + G ++
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+++ + + + +Y +I LC+ G+ + A + VP+ T + L+
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609
Query: 369 EGLKKNN 375
GL
Sbjct: 610 RGLASEG 616
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +++A C G + A V+ +M + G P Y + A + + G+
Sbjct: 112 YTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRD 171
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +GC ++ N+ +Q + ++ +A +L+ L+ FG EPD V+YN V++G C +
Sbjct: 172 LHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMAR 231
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + M+ PN + T+I +LC+ G F + + + P V +
Sbjct: 232 RWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYA 291
Query: 366 ALLEGLKKNNQ 376
+++G+ K +
Sbjct: 292 TIIDGVCKEER 302
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G+++ A++ M + GC + S + + L ++ + +A++ L+ V K + +
Sbjct: 474 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALE--LLNVMVKKGMSPN 531
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ + A G ++K + +Q V+ D + Y +IS+ K +
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA 591
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-----------LMQRFGI 287
MV GC PN +T+ + I+ L ++ +A +++ LM+ FGI
Sbjct: 592 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMKHFGI 644
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 52/279 (18%)
Query: 167 KAIQAFLM-EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K AFL+ E + H+ D+F++ I+I +FC++G+L +A EM + G P+V+TYT
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF-------------------------- 259
LI A+ K + N L+ +M+ +GC PN+ T+
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614
Query: 260 ---------------NVR----------IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N+R + L + +A L+ +M G EP+ + Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I GFC+ G LD A+ V++ M R PN Y ++I L ++ +LA + ++
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ P+V + +++GL K + +A +M++++ + H
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V L A KV E+RDL + + +E E HI +D +I FC++G LD+A +V
Sbjct: 643 VDGLCKAHKV-KEARDLLDVMS--VEGCEPNHIVYDA-----LIDGFCKVGKLDEAQMVF 694
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M + G P+V TY++LI +KD R ++ + + M+ C PN+ + I L
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++ +A +LM +M+ G P+ VTY +I GF ++G +D ++ M + PN Y
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ +I++ C G + A+ + D MK+ + P
Sbjct: 815 RVLINHCCAAGLLDDAHQLL-DEMKQTYWP 843
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI C +D A+L+ EM+ V PDV TYT LI +F K + +
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV GC PN+ T+ I + R+ AN+L +M G P+ VTY +I G C+S
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIY 329
G ++ A ++Y+ M G +P+ +Y
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMY 623
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-MEVPEKFHIQFD 185
+A + + AMD M C V + L R L + L M + E +
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD----------- 234
IF N +I A+C G AY ++ +M G +P + Y LI +
Sbjct: 371 IF--NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428
Query: 235 ---------------NRPEIGN---------------GLWNLMVCKGCFPNLATFNVRIQ 264
N+ + N + M+ KG P+ +T++ I
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L N + A L M+ + PD TY ++I FC+ G L A+K + M+ P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N Y +IH + + A + + + + +P+V T +AL++G K+ Q KA I
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 385 A 385
A
Sbjct: 609 A 609
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 45/283 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G+ A++ + G K + + NA ++V E+ L E+ + D
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS-GFNMDG 267
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ + C+ G +A L ++E ++ K D + YT +IS + + E +
Sbjct: 268 YTLGCFVHLLCKAGRWREA-LALIEKEEF--KLDTVIYTQMISGLCEASLFEEAMDFLSR 324
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PN+ T+ + + + KR+ + +++ +M G P +N +I +CRSG
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 307 -----------------------------------------LDMAKKVYSAMLGRRLMPN 325
L++A+K Y ML ++ N
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ + LC G F AY + ++ M K ++P T S ++
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 37/257 (14%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS--FNIVIKAFCEMGILDKAYLVMVE 211
+A L+VL + + + FL E+ ++ +I N++I+ C G+ + A +
Sbjct: 166 HALLEVLGCGGNDRVPEQFLREIRDE---DKEILGKLLNVLIRKCCRNGLWNVALEELGR 222
Query: 212 MQKLGVKPDVITYTTLISAFYKDNR--------PEIGNGLWNL-MVCKGCFPNL------ 256
++ LG KP +TY L+ F + +R E+ + +N+ GCF +L
Sbjct: 223 LKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR 282
Query: 257 -----------------ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ I L +A + M+ P+ VTY +++
Sbjct: 283 WREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLC 342
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G R L K++ S M+ P+R+I+ ++IH C+ GD++ AY + K P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 360 SVDTISALLEGLKKNNQ 376
+ L+ G+ N +
Sbjct: 403 GYVVYNILIGGICGNEK 419
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 9/266 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF-HIQFDIFSF 189
++ A++ +M GC ++ + + ++ + FL E+ KF ++ D+ +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM--KFMGLEADLVVY 250
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I+ FC+ G LD+ + E+ + G P ITY TLI F K + + + ++ M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G PN+ T+ I L ++ +A +L+ LM EP+ VTYN++I C+ G +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN----LAYIMCKDSMKKNWVPSVDTIS 365
A ++ M RR P+ Y ++ LC +GD + L Y+M KDS + P V + +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYN 428
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRV 391
AL+ GL K N+ +A I L+ ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F++++ NI++K C KA ++ EM++ + PDV +Y T+I F + E L
Sbjct: 140 FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N M GC +L T+ + I + +A + M+ G+E D V Y +I+GFC
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD K ++ +L R P Y T+I C+ G A + + +++ P+V T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 364 ISALLEGL 371
+ L++GL
Sbjct: 320 YTGLIDGL 327
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG + AM +M G + + + ++ + +L +A EV E+
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I ++N +I+ FC++G L +A + M + GV+P+V TYT LI + + L
Sbjct: 282 AI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 245 NLMVCKGCFPNLATFN---------------VRIQHLVNKRRSW---------------- 273
NLM+ K PN T+N V I L+ KRR+
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 274 ----QANKLMGLMQRFG--IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+A+KL+ LM + +PD ++YN +I G C+ L A +Y ++ + +R
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+++ + GD N A + K V + DT +A+++G K
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I FC+ G+L+ A ++ +M+ ++P V Y L+S+ K+ + L+ M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
FP++ +FN+ I + A L+ M R G+ PD TY+ +I F + G+L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A + M+ P+ I +++ Y +G+
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGE 649
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
KAG + AM+ + + R + A + ++ L + L M V E +Q
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE---LQP 527
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+F +N ++ + C+ G LD+A+ + EMQ+ PDV+++ +I K + L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+L T++ I + +A M G EPD + V+K
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G D ++ ++ + ++ ++++ T++ Y+C
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K GM+ A M + + +V N L L + L QA+ L E ++ +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD--QAWRLFEEMQRDNNF 561
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ SFNI+I + G + A ++V M + G+ PD+ TY+ LI+ F K +
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ MV G P+ + +++ +++ + + +L+ + I D+ V+ C
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Query: 304 -SGHLDMAKKV 313
S ++D+AK++
Sbjct: 682 SSANMDLAKRL 692
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
++ + L+ + + + G+ LM+ +G N+ N+ ++ L +A L+
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+R + PD +YN VI+GFC L+ A ++ + M G + + +I C+ G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 342 FNLA 345
+ A
Sbjct: 228 MDEA 231
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L++ + E+ + M+ F N + + ++ V R++ A ++ LM + G
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ +N+++KG CR+ A + M LMP+ Y T+I C+
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA-------- 230
K + D++SF IVIK CE G ++K++ ++VE+++ G P+V+ YTTLI
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215
Query: 231 ---------------------------FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+K+ + G ++ M G FPNL T+N +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
R+ A KL M+ G+ + VTYN +I G CR + A KV M +
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN Y T+I C G A +C+D + PS+ T + L+ G K A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 384 MALVQRR 390
+ ++ R
Sbjct: 396 VKEMEER 402
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEK 179
+M + K G K A F +M G + + N + L R++KA +A +M+ +
Sbjct: 274 VMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLC--REMKANEANKVMDQMKS 331
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I ++ ++N +I FC +G L KA + +++ G+ P ++TY L+S F K
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ M +G P+ T+ + I +A +L M+ G+ PD TY+++I
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIH 451
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC G ++ A +++ M+ ++L PN+ IY TM+ C+EG A + ++ +K P
Sbjct: 452 GFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511
Query: 360 SVDTISALLEGLKKNNQPCKANTIM 384
+V + ++E L K + +A ++
Sbjct: 512 NVASYRYMIEVLCKERKSKEAEGLV 536
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 130/266 (48%), Gaps = 7/266 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG I+ + D ++ +G V + + +++ + E+ KF + +
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMG-KFGLVANE 233
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++I + GI + + + +MQ+ GV P++ TY +++ KD R + L++
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N+ T+N I L + ++ +ANK+M M+ GI P+ +TYN +I GFC G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A + + R L P+ Y ++ C++GD + A + K+ ++ PS T +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVP 392
L++ + + KA +Q R P
Sbjct: 414 LIDTFARMDNMEKA------IQLRSP 433
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 5/263 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM-EVPEKFHIQFD 185
K G I+ A D F++M +G + + L ++ K Q F M E ++ + +
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK--QGFEMYEKMQEDGVFPN 267
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++N V+ C+ G A+ + EM++ GV +++TY TLI ++ + N + +
Sbjct: 268 LYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PNL T+N I + +A L ++ G+ P VTYN+++ GFC+ G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTI 364
A KV M R + P++ Y +I + + A I + M++ P V T
Sbjct: 388 DTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKA-IQLRSPMEELGLTPDVHTY 446
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
S L+ G Q +A+ + L+
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKLM 469
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + A+ D+ G ++ + N + + D + E+ E+ I+
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER-GIKPSKI 409
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ I+I F M ++KA + M++LG+ PDV TY+ LI F + + L+ LM
Sbjct: 410 TYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLM 469
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V K PN +N + + S++A +L M+ + P+ +Y +I+ C+
Sbjct: 470 VAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529
Query: 308 DMAKKVYSAMLGRRLMPNRKI 328
A+ + M+ + P+ I
Sbjct: 530 KEAEGLVEKMIDTGIDPSDSI 550
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KAIQ L E+ + D+ +++++I FC G +++A + M ++P+ + Y T
Sbjct: 426 KAIQ--LRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNT 483
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
++ + K+ L+ M K PN+A++ I+ L +R+S +A L+ M G
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTG 543
Query: 287 IEPDEVTYNLV 297
I+P + NL+
Sbjct: 544 IDPSDSILNLI 554
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++NI+I C+ DKA ++ EM GV PD +T+ +++ K + E + L
Sbjct: 9 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + C P+ T+N I L ++ +A L+ G PD VTY+++ G C+
Sbjct: 69 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M G PN Y T+I LC+ AY + + + +VP V T
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188
Query: 365 SALLEGLKKNNQPCKA 380
+ +++GL K + KA
Sbjct: 189 TIIVDGLCKEGRLDKA 204
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA A + ++M G + N+ + L ++ + + L + E+ + +
Sbjct: 22 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER-NCRPSC 80
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ +D+A ++ E G PDV+TY+ L K R + L
Sbjct: 81 CTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 140
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PNL T+N I L ++ +A +L+ + G PD VTY +++ G C+ G
Sbjct: 141 MSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGR 200
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A K+ ML R P+ Y ++ LC+ G + A+ + K+ + K+ +
Sbjct: 201 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 260
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHF 394
L+ G K+++ +A ++ + R P+
Sbjct: 261 LVNGYCKSSRTKEAQKVVDGI-RGTPYI 287
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 12/301 (3%)
Query: 95 RFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVK 151
R D I ++ E + +P + +M + +GK + A MH GC V
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK---VDEAFPFLESMHSAGCVPDVV 358
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S N + L ++ K + L ++ + I D ++N ++ FC+ D A ++
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN-LATFNVRIQHLVNKR 270
M K GV PD +TY TLIS + NR L + M+ GC + T+N I L +
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 477
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
QA LM M G+E + VTYN+ I C+ G LD A + S M R + Y
Sbjct: 478 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYT 534
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMK-KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I LC+ + A + ++ + K + T + L++ K + +A T++ L+ +
Sbjct: 535 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ 594
Query: 390 R 390
R
Sbjct: 595 R 595
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 142/327 (43%), Gaps = 11/327 (3%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
++ F+L K + N N + + L A + + LLE S G +
Sbjct: 132 DEAFELVKEMSGNGCT-PNLVTYNTLIDGLCKASKTEKAYELLETLVS--SGFVPDVVTY 188
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
+++ G K G + A+ M GC +V + A ++ L + + E+
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-P 237
K D ++ ++ +C+ +A V+ ++ P + Y L+ + K+ R
Sbjct: 249 K-DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLD 304
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
EI N ++ M C+GC PN+ T+N+ + L + +A + M G PD V+YN++
Sbjct: 305 EIPN-VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G ++ A++V M+ + P+ Y T++ C+E F+ A + K+ +K
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIM 384
P T + L+ GL + N+ A +M
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELM 450
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + V PDV TY LI K ++ + + + + MV +G P+ TFN + L +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A+ L+ +M P TYN +I G C+ ++D AK + + +P+ Y
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ LC+ G + A+ + K+ P++ T + L++GL K ++ KA
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKA 169
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N ++ +C+ G LD+ V +M G P++ TY ++ K + + M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P++ ++N+ I L + +A +++ M + GI PD VTYN ++ FC+ D
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
A + M+ + P+ Y T+I L Q AY + + ++ V S T
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 464
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
LM+ ++ + ++NI I C+ G LD+A ++ EM L D ++YTT+I
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGL 540
Query: 232 YKDNRPEIGNGLWNLMVC-KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K + + + L MV KG TFN+ I +R +A L+ LM + G P
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+TYN+VI C+ +D A +++ M R ++ + Y +I+ LC +G
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 9/194 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A+ M +G + + N + L + L + L E D
Sbjct: 475 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE----MDTLRDE 530
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT---LISAFYKDNRPEIGNGL 243
S+ VI C+ LD+A + EM + VK IT T LI AF K R + L
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREM--VAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 588
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
LMV +GC P++ T+N+ I L + +A +L M GI V+Y ++I G C
Sbjct: 589 LELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 648
Query: 304 SGHLDMAKKVYSAM 317
G A +V M
Sbjct: 649 QGRGKEALQVLEEM 662
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN++I AF + LD+A ++ M + G P VITY +I+ K ++ + L++ M
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+G + ++ V I L + R +A +++ M E D++
Sbjct: 628 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDL 672
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA---IQAFLMEVPEKFHIQFDIF 187
I A F ++ G + TV S N + +S +L ++ F+ME + D+F
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN----RVFPDVF 296
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++++I C+ G LD A + +EM G+ P+ +T+TTLI+ R ++G ++ M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL----------- 296
+ KG P++ T+N I L +A KL+ M + G++PD+ TY +
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416
Query: 297 ------------------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+I GFCR G + A++ ML + P+ Y +
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
IH C++GD + + K+ VP V T + LL GL K Q AN ++
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLL 528
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 102/189 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ FN+++ C+ +++A L+ E+ K G++P V+++ TLI+ + K + G L
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ FP++ T++V I L + + ANKL M G+ P++VT+ +I G C +
Sbjct: 284 RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVT 343
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D+ ++Y ML + + P+ Y T+I+ LC+ GD A + + ++ P T
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Query: 365 SALLEGLKK 373
+ L++G K
Sbjct: 404 TMLIDGCCK 412
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQ 183
K G + A F +M C R + + L + ME+ ++ ++
Sbjct: 307 KEGQLDDANKLFLEM----CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ ++N +I C++G L +A +++EM + G+KPD TYT LI K+ E +
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV +G + F I + + +A + + M GI+PD+ TY +VI GFC+
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + K+ M +P Y +++ LC++G A ++ + VP T
Sbjct: 483 KGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542
Query: 364 ISALLEG 370
+ LLEG
Sbjct: 543 YNILLEG 549
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
+R ++ N F ++ R D + +Q+ L +G + I ++ G K G
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEI--YQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A +M G K + + + DL++ E+ ++ I+ D +F
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE-GIELDNVAFT 439
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC G + +A + EM + G+KPD TYT +I F K + G L M C
Sbjct: 440 ALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCD 499
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P + T+NV + L + + AN L+ M G+ PD++TYN++++G C+ G+ +
Sbjct: 500 GHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDF 559
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYL---CQE 339
K+ S + L+ + Y ++I L C+E
Sbjct: 560 DKLQSE---KGLVQDYGSYTSLIGDLRKTCKE 588
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
M+ + M G K V + N + L + DL+ + ++E+ ++ ++ D F++ ++I
Sbjct: 349 GMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLI 407
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ G L+ A + EM K G++ D + +T LIS F ++ + M+ G
Sbjct: 408 DGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIK 467
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ AT+ + I K KL+ MQ G P VTYN+++ G C+ G + A +
Sbjct: 468 PDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANML 527
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEG---DFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
AML ++P+ Y ++ C+ G DF+ K +K V + ++L+
Sbjct: 528 LDAMLNLGVVPDDITYNILLEGHCKHGNREDFD------KLQSEKGLVQDYGSYTSLIGD 581
Query: 371 LKKN 374
L+K
Sbjct: 582 LRKT 585
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AIQ F + K ++Q S + ++ + A+ E+ G PDV + L
Sbjct: 174 AIQCF--RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVL 231
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ K+++ L+ + +G P + +FN I Q +L M +
Sbjct: 232 MHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV 291
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD TY+++I G C+ G LD A K++ M R L+PN + T+I+ C G +L
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
+ + ++K P V T + L+ GL K
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCK 377
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G PD +N+++ C+ ++ A+ ++ + R L P + T+I+ C+ G+ +
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + M+ P V T S L+ GL K Q AN +
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 5/271 (1%)
Query: 109 LPQGRREGF---IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+ QG + GF + I LY AG + F M G V S N + ++
Sbjct: 419 VEQGMKFGFSTYLALIKALY-MAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSM 477
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
+ E+ K I ++ +FN +I +C+ G + K+ ++V + + G KPD+ T++
Sbjct: 478 MDKATNTFKEMQYK-GIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFS 536
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
++I + + E G ++ MV G PN T+N+ I L ++ KL+ MQ
Sbjct: 537 SIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTD 596
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI PD ++N +I+ FCR G ++ AKK++S+ML L+P+ Y I CQ G FN A
Sbjct: 597 GINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEA 656
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ +P T + +L+ L K +Q
Sbjct: 657 KELFLSMEANGCMPDSFTCNIILDALVKQDQ 687
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + K M+ A +TF +M G + + N + + ++ + L+ + E
Sbjct: 468 VIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEH- 526
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ DIF+F+ +I C ++ A EM G+ P+ +TY LI +
Sbjct: 527 GFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRS 586
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L M G P++ +FN IQ + A KL M G+ PD TY IK
Sbjct: 587 MKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKV 646
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
FC+SG + AK+++ +M MP+ ++ L ++ F A
Sbjct: 647 FCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 1/227 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G K + N A+ L + DL + L E+ ++F ++ +IKA G + +
Sbjct: 387 GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQ-GMKFGFSTYLALIKALYMAGKVTE 445
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
+M K G+ +V +Y +I F K + + + M KG PNL TFN I
Sbjct: 446 GNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLID 505
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
++ L+ ++ G +PD T++ +I G CR+ ++ A +S M+ L P
Sbjct: 506 GYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSP 565
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
N Y +IH LC GD + + + P V + +AL++
Sbjct: 566 NAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSF 612
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 140/352 (39%), Gaps = 74/352 (21%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G+ G+ K+ + F + G + + NA + L +S L ++ + +
Sbjct: 192 WGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSAD-NCKP 250
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++NI+I C G++D+A ++ +M+ LG P+V TYT LI F+ + + +
Sbjct: 251 DRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVL 310
Query: 245 NLMVCKGCFPNLAT-----------------FNVRIQH------------------LVNK 269
M + P+ AT F + I+ L +K
Sbjct: 311 ETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSK 370
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNL----VIKGF-----CR--------------SGH 306
+ +A L+ + G +PD T+N+ +IKGF C S +
Sbjct: 371 NMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTY 430
Query: 307 LDMAKKVYSA------------MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
L + K +Y A M+ L+ N Y +I C+ + A K+
Sbjct: 431 LALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQY 490
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
K P++ T + L++G K + CK+ ++ ++ + H + F SI+
Sbjct: 491 KGIPPNLVTFNTLIDGYCKGGEICKSRDLLVML---LEHGFKPDIFTFSSII 539
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A I+ A+ F +M ++G + N + L D+ L ++ I D+
Sbjct: 544 RAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTD-GINPDV 602
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FSFN +I++FC MG ++ A + M LG+ PD TY I F + R L+
Sbjct: 603 FSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLS 662
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
M GC P+ T N+ + LV + + A K+ +GI
Sbjct: 663 MEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGI 703
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I + D + +G K + + ++ + L ++ ++ E+ + +
Sbjct: 507 YCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMV-MWGLSP 565
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++NI+I + C +G + ++ ++ +MQ G+ PDV ++ LI +F + + E L+
Sbjct: 566 NAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLF 625
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T+ I+ R +A +L M+ G PD T N+++ +
Sbjct: 626 SSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQ 685
Query: 305 GHLDMAKKV 313
+ A+K+
Sbjct: 686 DQFEAAQKI 694
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I ++ +G+ + ++ LG+ P Y +I A K N ++ + M
Sbjct: 187 ILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSAD 246
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P+ T+N+ I + +A +L+ M+ G P+ TY ++I GF + +D A
Sbjct: 247 NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEA 306
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIH 334
+V M R++ P+ ++ IH
Sbjct: 307 FRVLETMKARKVSPSEATIRSFIH 330
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 4/251 (1%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M+ A++ FY M G ++ N L +L+ ++ F ++ + I+ ++++F
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM-YRMEIKSNVYTF 228
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI+I C+ G L KA + M+ G+KP ++TY TL+ F R E + + M
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG P++ T+N + + N+ R A++++ M+ G+ PD V+YN++I+G +G L+M
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEM 345
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A M+ + ++P Y T+IH L E A I+ ++ +K V T + L+
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 370 GLKKNNQPCKA 380
G ++ KA
Sbjct: 406 GYCQHGDAKKA 416
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T + N + L ++A + + E+ EK I D ++NI+I +C+ G KA+ +
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREK-GIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM G++P TYT+LI + N+ + L+ +V KG P+L N +
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+A L+ M I PD+VTYN +++G C G + A+++ M R + P+
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y T+I ++GD A+++ + + + P++ T +ALL+GL KN +
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ L + I++A + DM+ K V + N + VL + LK + FL + E F
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL-GIMEVF 254
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--- 237
I+ I ++N +++ F G ++ A L++ EM+ G +PD+ TY ++S + R
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV 314
Query: 238 -----EIG-----------------NGLWNL-------MVCKGCFPNLATFNVRIQHLVN 268
EIG NG + MV +G P T+N I L
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + A L+ ++ GI D VTYN++I G+C+ G A ++ M+ + P +
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y ++I+ LC++ A + + + K P + ++ L++G
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+NI+I+ G L+ A+ EM K G+ P TY TLI + +N+ E L
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG + T+N+ I + +A L M GI+P + TY +I CR
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
A +++ ++G+ + P+ + T++ C G+ + A+ + K+ + P T
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR---VPHFSSNQL 399
+ L+ GL + +A +M ++RR H S N L
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++++ C++ ++D+A M++ G P T +++ + NR E + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
N+ TFN+ I L + + +A +G+M+ FGI+P VTYN +++GF G ++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ + S M + P+ + Y ++ ++C EG A + ++ + VP + + L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 369 EGLKKNNQ 376
G N
Sbjct: 335 RGCSNNGD 342
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 106 QKSLPQGRREGFIMRIMMLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+K + +G + +M ++ G G + A +M + + N ++ L
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ + + E+ + I+ D S+N +I + + G A++V EM LG P ++T
Sbjct: 516 GKFEEARELMGEMKRR-GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
Y L+ K+ E+ L M +G PN ++F I+ + N
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 41/297 (13%)
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
E + ++ + +A M A+ F D+ L GC ++S NA L +R AF
Sbjct: 124 ESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFF 183
Query: 174 MEVPEKF---HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+ + ++ ++NI++++ C G +D+A + +++ GV PD +TY+TL+S
Sbjct: 184 ASLSHGACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSG 243
Query: 231 FYK-----------DNRPEIG---NGLWNLMVCKGCF----------------------P 254
K D P+ G + + + GCF P
Sbjct: 244 LVKHDQLDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASP 303
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
NLAT+ V + L R +A ++ M +PD VTY ++I G CRSG +D A +VY
Sbjct: 304 NLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVY 363
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
S M+ L+ + +Y ++I C+ G A+ DS + + + T + +++GL
Sbjct: 364 SDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFW-DSTGFSGIRQITTYNVMMKGL 419
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM----LGRRLMPNRKIYQTMIHYLCQEG 340
G P ++N ++ F R+ A ++++ GRRL PN + Y ++ LC G
Sbjct: 154 LGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARG 213
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
D + A + ++ P T S L+ GL K++Q
Sbjct: 214 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQ 249
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 20/289 (6%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
FD +LEH +M++ G + +D Y LY N
Sbjct: 101 FDTCRKVLEH------------LMKLKYFKLVWGFYEEILDCGYPASLY-------FFNI 141
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ + D++ Q + K+ ++ + SFN ++ + +G LD+ + + M
Sbjct: 142 LMHRFCKEGDIRVAQ-LVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 200
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
GV+PDV TY+ LI+ K+++ + NGL++ M+ KG PN TF I RR A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLA 260
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ M + PD +TYN +I G C+ G L A + M + L P++ Y T+I
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 320
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
C+EGD A+ K +++N +AL+ GL + + A ++
Sbjct: 321 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVL 369
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 5/283 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI+ K+
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNR 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG + A + ++ +
Sbjct: 316 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR--RVPHFSS 396
P T + ++ K + ++ +QR VP S
Sbjct: 376 GLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 5/188 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
++ ++ N F ++ RR D + +++ L Q I ++YG K G
Sbjct: 234 DKGLVPNGVTFTTLIAGHCKNRRVDLAMEI--YKQMLSQSLSPDLITYNTLIYGLCKKGD 291
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A D +M + G K + + + DL+ + ++ +I+ D ++
Sbjct: 292 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE-NIRLDDVAYT 350
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C+ G A V+ EM +G+KPD TYT +I+ F K G+ L M
Sbjct: 351 ALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRD 410
Query: 251 GCFPNLAT 258
G P++ +
Sbjct: 411 GHVPSVVS 418
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 11/305 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEH----QKSLPQGRREGFIMRIMMLYG------KAGMI 131
++ + L A+R+ +E L++ ++L Q + G I M K G
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHH 282
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A + M YG K V N LK + + + + L E+ +K + D +FNI
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK-NCPLDDVTFNI 341
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ FC+ G++D+ ++ +M + G PDVITYTT+I+ F K+ + L M G
Sbjct: 342 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCG 401
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C PN ++ + ++ L + R A +LM M + G P+ VT+N +I C+ G ++ A
Sbjct: 402 CKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAI 461
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ ML P+ Y T+I L + G A + + K P+V T S++ L
Sbjct: 462 ELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFAL 521
Query: 372 KKNNQ 376
+ +
Sbjct: 522 AREGR 526
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G A+ +H G + N + + + + L ++P F + DI
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLP-LFGCEADI 221
Query: 187 FSFNIVIKAFCE----------MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
S+N V+K C M + K + + +M + G PD+ Y T+I K+
Sbjct: 222 VSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGH 281
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E+ N + + M G PN+ +N ++ + + R +A +L+ M + D+VT+N+
Sbjct: 282 HEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNI 341
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ FC++G +D ++ ML MP+ Y T+I+ C+EG + A ++ K+
Sbjct: 342 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCG 401
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMA 385
P+ + + +L+GL + A +M+
Sbjct: 402 CKPNTISYTIVLKGLCSTERWVDAEELMS 430
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +LEH G I ++ G K G+I A+ +M GCK
Sbjct: 354 RVIELLEQMLEH------GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + + + + ++ + + +FN +I C+ G++++A ++ +
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPV-TFNTIINFLCKKGLVEQAIELLKQ 466
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + E L N+M+ KG PN+ T++ L + R
Sbjct: 467 MLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGR 526
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +Q I D V YN VI C+ D+A + M+ MPN Y
Sbjct: 527 IDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTA 586
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 587 LIKGLASEG 595
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 138/316 (43%), Gaps = 8/316 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLE--HQKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + + A R++ E LL +QK+ P + I++ + + G++ +
Sbjct: 300 NVVCYNTVLKGICSADRWEKAEELLTEMYQKNCP---LDDVTFNILVDFFCQNGLVDRVI 356
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + + L +P + + S+ IV+K
Sbjct: 357 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMP-SCGCKPNTISYTIVLKG 415
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C A +M M + G P+ +T+ T+I+ K E L M+ GC P+
Sbjct: 416 LCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPD 475
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ +TY+ + R G +D +++
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFD 535
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + + +Y +I LC+ + +LA + +P+ T +AL++GL
Sbjct: 536 NIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595
Query: 376 QPCKANTIMA-LVQRR 390
C+A +++ L RR
Sbjct: 596 LLCEAQDLLSELCSRR 611
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 117/220 (53%), Gaps = 1/220 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 96 VLEHLMKLKYFKLVWGFYQEILECGY-PASLYFFNILMHRFCKEGNIRVAQSVFDAITKW 154
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL+S + + + G L + M G P++ T++V I L + + +A
Sbjct: 155 GLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEA 214
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 215 NELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 274
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
LC++GB A+++ + K P T + L++G K
Sbjct: 275 LCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEG 314
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 127 FFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLD--EGFRLKS 184
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D+A + EM G+ P +T+TTLI K+
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNG 244
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G +PD++TY
Sbjct: 245 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYT 304
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 305 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 364
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 365 GXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQR 398
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + BLK + E+ K + D
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLK-GXKPDK 300
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 301 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 360
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W +KL+ MQR G P VTYN+++ G
Sbjct: 361 MLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+ + +A+D M + G + + N+ + L S ++ K I D+
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR-MVSCMTKREIYPDV 256
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+FN +I A + G + +A + EM + + PD++TY+ LI +R + ++
Sbjct: 257 FTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGF 316
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGCFP++ T+++ I ++ KL M + G+ + VTY ++I+G+CR+G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L++A++++ M+ + PN Y ++H LC G A ++ D K + T +
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 367 LLEGLKKNNQPCKA 380
++ G+ K + A
Sbjct: 437 IIRGMCKAGEVADA 450
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 5/243 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA--IQAFLMEVPEKFHIQFDIFS 188
+ ++D F+ H+ C R + S+ ++L+ +K + +L E + I ++ +
Sbjct: 62 LDDSLDLFF--HMVQC-RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT 118
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
NI++ FC L A + +M KLG +PD++T+ +L++ F + +R +++ MV
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV 178
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N I L ++ A L+ M+ GI PD VTYN +I G C SG D
Sbjct: 179 EMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWD 238
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ S M R + P+ + +I +EG + A + ++ ++++ P + T S L+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298
Query: 369 EGL 371
GL
Sbjct: 299 YGL 301
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + G + + N L L +FL ++ + H + DI +F ++ FC
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGH-EPDIVTFGSLLNGFCRGD 165
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + M ++G +P+V+ Y T+I K + + L N M G P+ T+N
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L N R A +++ M + I PD T+N +I + G + A+++Y M+ R
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR 285
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L P+ Y +I+ LC + A M + K P V T S L+ G K+ +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 35/240 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N +I C+ +D A ++ M+ G++PD +TY +LIS R + +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMV 244
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNK--------------RRSW----------------- 273
+ M + +P++ TFN I V + RRS
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 274 ----QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A ++ G M G PD VTY+++I G+C+S ++ K++ M R ++ N Y
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I C+ G N+A + K + P++ T + LL GL N + KA I+A +Q+
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 87/156 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++I+I +C+ ++ + EM + GV + +TYT LI + + + + ++
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF 384
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+NV + L + + +A ++ MQ+ G++ D VTYN++I+G C++
Sbjct: 385 KWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKA 444
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + A +Y ++ + L P+ Y M+ L ++G
Sbjct: 445 GEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +++++I C LD+A + M G PDV+TY+ LI+ + K + E G L+
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G N T+ V IQ + A ++ M G+ P+ +TYN+++ G C +
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A + + M + + Y +I +C+ G+ A+ + K P + T
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469
Query: 365 SALLEGLKKNNQPCKANTI 383
+A++ GL K +A+ +
Sbjct: 470 TAMMLGLYKKGLRGEADAL 488
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD + + M + P + ++ L+SA K + ++ LW M G NL T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ + A +G M + G EPD VT+ ++ GFCR + A ++ M+
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
PN IY T+I LC+ + A + P T ++L+ GL + + A
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241
Query: 382 TIMALVQRR 390
+++ + +R
Sbjct: 242 RMVSCMTKR 250
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-----MEVPEK 179
Y K+ ++H M F +M G R + ++ + L + VP
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPP- 394
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+I ++N+++ C+ G ++KA +++ +MQK G+ D++TY +I K
Sbjct: 395 -----NIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
L+ + KG P++ T+ + L K +A+ L M+ GI P+E
Sbjct: 450 AWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 52/279 (18%)
Query: 167 KAIQAFLM-EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K AFL+ E + H+ D+F++ I+I +FC++G+L +A EM + G P+V+TYT
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF-------------------------- 259
LI A+ K + N L+ +M+ +GC PN+ T+
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614
Query: 260 ---------------NVR----------IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N+R + L + +A L+ +M G EP+ + Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I GFC+ G LD A+ V++ M R PN Y ++I L ++ +LA + ++
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ P+V + +++GL K + +A +M++++ + H
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V L A KV E+RDL + + +E E HI +D +I FC++G LD+A +V
Sbjct: 643 VDGLCKAHKV-KEARDLLDVMS--VEGCEPNHIVYDA-----LIDGFCKVGKLDEAQMVF 694
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M + G P+V TY++LI +KD R ++ + + M+ C PN+ + I L
Sbjct: 695 TKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKV 754
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++ +A +LM +M+ G P+ VTY +I GF ++G +D ++ M + PN Y
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ +I++ C G + A+ + D MK+ + P
Sbjct: 815 RVLINHCCAAGLLDDAHQLL-DEMKQTYWP 843
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI C +D A+L+ EM+ V PDV TYT LI +F K + +
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV GC PN+ T+ I + R+ AN+L +M G P+ VTY +I G C+S
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIY 329
G ++ A ++Y+ M G +P+ +Y
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMY 623
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-MEVPEKFHIQFD 185
+A + + AMD M C V + L R L + L M + E +
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD----------- 234
IF N +I A+C G AY ++ +M G +P + Y LI +
Sbjct: 371 IF--NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428
Query: 235 ---------------NRPEIGN---------------GLWNLMVCKGCFPNLATFNVRIQ 264
N+ + N + M+ KG P+ +T++ I
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L N + A L M+ + PD TY ++I FC+ G L A+K + M+ P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N Y +IH + + A + + + + +P+V T +AL++G K+ Q KA I
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 385 A 385
A
Sbjct: 609 A 609
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+ A++ + G K + + NA ++V E+ L E+ + D ++
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS-GFNMDGYT 269
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ C+ G +A L ++E ++ K D + YT +IS + + E + M
Sbjct: 270 LGCFVHLLCKAGRWREA-LALIEKEEF--KLDTVIYTQMISGLCEASLFEEAMDFLSRMR 326
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH-- 306
C PN+ T+ + + + KR+ + +++ +M G P +N +I +CRSG
Sbjct: 327 SSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYS 386
Query: 307 ---------------------------------------LDMAKKVYSAMLGRRLMPNRK 327
L++A+K Y ML ++ N+
Sbjct: 387 YAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ LC G F AY + ++ M K ++P T S ++
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 37/257 (14%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS--FNIVIKAFCEMGILDKAYLVMVE 211
+A L+VL + + + FL E+ ++ +I N++I+ C G+ + A +
Sbjct: 166 HALLEVLGCGGNDRVPEQFLREIRDE---DKEILGKLLNVLIRKCCRNGLWNVALEELGR 222
Query: 212 MQKLGVKPDVITYTTLISAFYKDNR--------PEIGNGLWNL-MVCKGCFPNL------ 256
++ LG KP +TY L+ F + +R E+ + +N+ GCF +L
Sbjct: 223 LKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR 282
Query: 257 -----------------ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ I L +A + M+ P+ VTY +++
Sbjct: 283 WREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLC 342
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G R L K++ S M+ P+R+I+ ++IH C+ GD++ AY + K P
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQP 402
Query: 360 SVDTISALLEGLKKNNQ 376
+ L+ G+ N +
Sbjct: 403 GYVVYNILIGGICGNEK 419
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ N + + + L ARR D LLE+ +SL + + YGK+G A+
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
DTF M G ++ + NA+L L E+ + + ++ K + D ++N+++K
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDL-HKCGLSPDSVTYNMLMKC 524
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+ + G +DKA ++ EM G +PDV+ +LI+ YK R + ++ + P
Sbjct: 525 YSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPT 584
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T+N+ + L + + +A +L G M G P+ +T+N ++ ++ +D+A K++
Sbjct: 585 VVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFC 644
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M P+ Y T+I+ L +EG + A+ MKK P T+ L+ G+ ++
Sbjct: 645 RMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFH-QMKKFLSPDYVTLCTLIPGVVRHG 703
Query: 376 Q 376
+
Sbjct: 704 R 704
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 136/295 (46%), Gaps = 3/295 (1%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
+ L A + D + L ++ + +M +GK G ++ + +M + G
Sbjct: 312 IDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGY 371
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
V + ++ L +S D+ +AF +++V I ++ ++N +I + LD+A
Sbjct: 372 APDVVTYTILIEALCKSGDVD--RAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
++ M+ LGVKP +Y I + K P + M +G P++A N +
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L R +A + + + G+ PD VTYN+++K + ++G +D A ++ S M+ + P+
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
I ++I+ L + G + A+ M P+V T + LL GL K + KA
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKA 604
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 7/300 (2%)
Query: 90 LAGARRFDY--IEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYG 145
+A RR D I +LLE KS+ G R + + G+A I A F +M G
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSI--GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG 300
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V + + L + L + +++ H D ++ ++ F ++G L+
Sbjct: 301 CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP-DRVTYITLMDKFGKVGDLETV 359
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
EM+ G PDV+TYT LI A K + + ++M KG FPNL T+N I
Sbjct: 360 KRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICG 419
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L+ RR +A +L+ M+ G++P +Y L I + +SG A + M R +MP+
Sbjct: 420 LLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
++ L + G + A + D K P T + L++ K Q KA +++
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLS 539
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 6/322 (1%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
L K K D + +F F N +E+ D L G+ + L E KS
Sbjct: 769 VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDG---LLGSNFTEKALELFEDMKSA 825
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KA 168
++ +GK+ I D + +M GC+ + N + L +S +L KA
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ + + F ++ +I + G ++A + EM G P+ + Y LI
Sbjct: 886 LDLYYELMSGDFSPT--PCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F K + L+ MV +G P+L ++ + ++ L R +A + ++ G++
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD V+YN +I G +S LD A ++S M R + P+ Y +I +L G ++A M
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKM 1063
Query: 349 CKDSMKKNWVPSVDTISALLEG 370
++ PSV T +AL+ G
Sbjct: 1064 YEELQLVGLEPSVFTYNALIRG 1085
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 1/263 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M+ G+ G + M+ +M G + + + ++ L +R + E+ ++
Sbjct: 241 LMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDE- 299
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D+ ++ ++I A C G LDKA + V+M+ PD +TY TL+ F K E
Sbjct: 300 GCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETV 359
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
WN M G P++ T+ + I+ L +A ++ +M GI P+ TYN +I G
Sbjct: 360 KRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICG 419
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
++ LD A ++ M + P Y I Y + GD A + K+ +PS
Sbjct: 420 LLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479
Query: 361 VDTISALLEGLKKNNQPCKANTI 383
+ +A L L + + +A I
Sbjct: 480 IAACNASLYTLAETGRISEAEDI 502
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N+++ A + ++K Y + EM+ G +P+ IT+ +ISA K N L+
Sbjct: 832 FTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYE 891
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
++ P T+ I L+ RS QA K+ M +G P+ V YN++I GF +SG
Sbjct: 892 LMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A +++ M+ + P+ K Y ++ LC G + A ++ P + +
Sbjct: 952 IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
++ GL K+ + +A ++ + ++ R
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNR 1035
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+S+N +I G ++A V M G+KP + TY+ L+ A + L
Sbjct: 202 YSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEE 260
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ T+ + I+ L RR A + M G PD +TY ++I C +G
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD AK++Y M P+R Y T++ + GD + + P V T +
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380
Query: 367 LLEGLKKNNQPCKA 380
L+E L K+ +A
Sbjct: 381 LIEALCKSGDVDRA 394
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K+G + A D M G + + N + L ++R L +A++ L+E E ++
Sbjct: 387 KSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALE--LLENMESLGVKPT 444
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV---------------------------- 217
FS+ + I + + G KA M+K G+
Sbjct: 445 AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFN 504
Query: 218 -------KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
PD +TY L+ + K + + L + M+ KGC P++ N I L
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAG 564
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R A K+ G ++ + P VTYN+++ G + G + A +++ +M PN +
Sbjct: 565 RVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFN 624
Query: 331 TMIHYLCQEGDFNLAYIM-CKDSMKKNWVPSVDTISALLEGL 371
+++ L + +LA M C+ +M N P V T + ++ GL
Sbjct: 625 SLLDCLSKNDAVDLALKMFCRMTM-MNCNPDVLTYNTIIYGL 665
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ LG+ P + +Y L+ N E L+ M G PN T+N+ + +R
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRI 847
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ L M+ G EP+ +T+N++I +S +L+ A +Y ++ P Y +
Sbjct: 848 NKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPL 907
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
I L + G A + ++ + P+ + L+ G K+ +
Sbjct: 908 IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G I A+ F ++ L G S N + L +SR L + E+ + I D++
Sbjct: 984 TGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNR-GISPDLY 1042
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I G +D A + E+Q +G++P V TY LI + ++ M
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Query: 248 VCKGCFPNLATF 259
+ GC PN TF
Sbjct: 1103 MVVGCSPNTETF 1114
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ SFN +I + +G LDK + + M GV PDV T T LI+ K+++ + N L+N
Sbjct: 171 VVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFN 230
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ KG PN TF I R A ++ M R G PD +TYN +I G CR G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKG 290
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L A+ + M + L P++ Y T+I C+EGD A+ + K ++++ +
Sbjct: 291 DLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYT 350
Query: 366 ALLEGLKKNNQPCKANTIM 384
AL+ GL + + A ++
Sbjct: 351 ALISGLCQEGRAVDAEKML 369
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +M + K G I+ A F + G + +V S N + DL + F ++
Sbjct: 138 FFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLD--KGFRLKT 195
Query: 177 P-EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ D+++ ++I C+ +D+A + EM G+ P+ +T+TTLI K
Sbjct: 196 AMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ +G P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A ++ M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ G K A+ ++ +QR
Sbjct: 376 GLKPENGTYTMIINGFCKQGDVKTASKLLKEMQR 409
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 153/330 (46%), Gaps = 3/330 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
+K ERDP++ +F + + N + + L ++F ++ +L K
Sbjct: 64 MKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRF 123
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAF 172
+E + +M + + + M+ F + + K ++ +++ L +L +S ++ +
Sbjct: 124 QESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLARKL 183
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAF 231
L+ +Q + FNI++K C+ G +D A+ V+ EM++ G+ P+ ITY+TL+
Sbjct: 184 LLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCL 243
Query: 232 YKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ +R + L+ M+ K G P+ FNV I +A ++ M++ G P+
Sbjct: 244 FAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPN 303
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
Y+ ++ GFC+ G + AK+V+ + L + Y T+++ LC+ G+ + A +
Sbjct: 304 VYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLG 363
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ T + +L GL + +A
Sbjct: 364 EMKASRCRADALTYNVILRGLSSEGRSEEA 393
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 97/189 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++++ ++ FC+ G + +A V E++K G+K D + YTTL++ ++ + L
Sbjct: 303 NVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLL 362
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C + T+NV ++ L ++ RS +A +++ G+ ++ +Y +++ C +
Sbjct: 363 GEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCN 422
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A K S M R + P+ + ++ LC+ G+ + + + +P+ +
Sbjct: 423 GELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSW 482
Query: 365 SALLEGLKK 373
A++E + K
Sbjct: 483 GAVVESICK 491
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ ++G ++ A M GC V + +A + + ++ + EV +K ++
Sbjct: 279 FCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEV-KKTGLKL 337
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + ++ C G +D+A ++ EM+ + D +TY ++ + R E +
Sbjct: 338 DTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQML 397
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ C+G N ++ + + L +A K + +M + GI P T+N ++ C S
Sbjct: 398 DQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCES 457
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G+ ++ +V LG L+P K + ++ +C+E
Sbjct: 458 GNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKE 492
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-PDEVTYNLVIKGFCRSGHLDMAKK 312
PN FN+ ++H A +++ M+R GI P+ +TY+ ++ A +
Sbjct: 195 PNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVE 254
Query: 313 VYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
++ M+ +R + P+ I+ MI+ C+ G+ A M D MKKN P+V SAL+ G
Sbjct: 255 LFEDMISKRGISPDPVIFNVMINGFCRSGEVERAK-MILDFMKKNGCNPNVYNYSALMNG 313
Query: 371 LKKNNQPCKANTIMALVQR 389
K + +A + V++
Sbjct: 314 FCKEGKIQEAKQVFDEVKK 332
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 136/315 (43%), Gaps = 61/315 (19%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+ML G K GM++ A M G ++S N L L + L Q L E+ +K
Sbjct: 300 LMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDK 359
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I+ +I+SFN V+ C+ G++ A ++M M G+ PD +TY+TL+ +
Sbjct: 360 -GIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLK 418
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
N + + M+ +GC PN T N+ + L + R ++A KL+ M + D VT N+VI
Sbjct: 419 ANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVID 478
Query: 300 GFCRSGHLDMAKKVYSAML-----------------------GRRLMPN----------- 325
G C+SG LD A ++ M G++ +P+
Sbjct: 479 GLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGL 538
Query: 326 ---------RK---------------IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
RK IY T IH C+ G + A+ + KD K+ S+
Sbjct: 539 CKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSL 598
Query: 362 DTISALLEGLKKNNQ 376
T ++L+ GL NQ
Sbjct: 599 QTYNSLILGLGSKNQ 613
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++I+I C+ G LD+A +EM + PD I Y T I +F K + +
Sbjct: 527 DLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVL 586
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC +L T+N I L +K + ++ L+ M+ GI P+ TYN +I C
Sbjct: 587 KDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEG 646
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G + A + ML + + PN ++ +I C+ DF +
Sbjct: 647 GRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGV 686
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 11/246 (4%)
Query: 152 SLNAALKVLTES--RDL--KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
SL A +++L +S DL Q+F +VP ++ +N+V+++ +D
Sbjct: 81 SLIALIRILAKSGLSDLAFSQFQSFRSQVPAN---PPPVYLYNMVLESSLREDKVDSFSW 137
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
+ +M GV P+ T LI+ R E +++ M KGC PN +F + ++
Sbjct: 138 LYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYC 197
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
S +A +L+ M FG++P++V YN +I FCR G + A+++ M L P+
Sbjct: 198 RAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVV 257
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV----PSVDTISALLEGLKKNNQPCKANTI 383
+ + I LC G A + +D + P++ T + +LEG K +A T+
Sbjct: 258 TFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317
Query: 384 MALVQR 389
+ ++R
Sbjct: 318 VESMKR 323
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 7/271 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQ 183
Y +AG+ A++ M +G + N + E R+ +A + L+E + +
Sbjct: 196 YCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAER--LVERMREDGLF 253
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQ---KLGV-KPDVITYTTLISAFYKDNRPEI 239
D+ +FN I A C G + +A + +MQ +LG+ +P++ T+ ++ F K+ E
Sbjct: 254 PDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEE 313
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M G L ++N+ + LV + +A + M GIEP+ ++N V+
Sbjct: 314 AKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMD 373
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C++G + A+ + M+ + P+ Y T++H C G A + + M++ P
Sbjct: 374 GLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSP 433
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ T + LL L K + +A ++ + R
Sbjct: 434 NTYTCNILLHSLWKEGRIFEAEKLLQKMNER 464
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A + F+ V + H D ++ I +FC+ G + A+ V+ +M+K G + TY +
Sbjct: 546 EARKKFIEMVGKSLHP--DSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI N+ GL + M KG PN+ T+N I L R A L+ M + G
Sbjct: 604 LILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKV--------------YSAM-----LGRRLMPNRK 327
I P+ ++ L+IK FC++ + K+V YS M +G + ++
Sbjct: 664 ISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKE 723
Query: 328 IYQTMIHYLCQEGDF---NLAYIMCKDSMKKN 356
++ + G+F +L +CKD M +N
Sbjct: 724 LFDAALDRCFDLGNFQYNDLIEKLCKDEMLEN 755
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA---IQAFLMEVPEKFHIQFDIF 187
I A F ++ G + TV S N + +S +L ++ F+ME + D+F
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMEN----RVFPDVF 296
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++++I C+ G LD A + +EM G+ P+ +T+TTLI+ R ++G ++ M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL----------- 296
+ KG P++ T+N I L +A KL+ M + G++PD+ TY +
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416
Query: 297 ------------------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+I GFCR G + A++ ML + P+ Y +
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
IH C++GD + + K+ VP V T + LL GL K Q AN ++
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLL 528
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 102/189 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ FN+++ C+ +++A L+ E+ K G++P V+++ TLI+ + K + G L
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ FP++ T++V I L + + ANKL M G+ P++VT+ +I G C +
Sbjct: 284 RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVT 343
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D+ ++Y ML + + P+ Y T+I+ LC+ GD A + + ++ P T
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
Query: 365 SALLEGLKK 373
+ L++G K
Sbjct: 404 TMLIDGCCK 412
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 7/246 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQ 183
K G + A F +M C R + + L + ME+ ++ ++
Sbjct: 307 KEGQLDDANKLFLEM----CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ ++N +I C++G L +A +++EM + G+KPD TYT LI K+ E +
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV +G + F I + + +A + + M GI+PD+ TY +VI GFC+
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + K+ M +P Y +++ LC++G A ++ + VP T
Sbjct: 483 KGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542
Query: 364 ISALLE 369
+ LLE
Sbjct: 543 YNILLE 548
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
+R ++ N F ++ R D + +Q+ L +G + I ++ G K G
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEI--YQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A +M G K + + + DL++ E+ ++ I+ D +F
Sbjct: 381 LREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE-GIELDNVAFT 439
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC G + +A + EM + G+KPD TYT +I F K + G L M C
Sbjct: 440 ALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCD 499
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
G P + T+NV + L + + AN L+ M G+ PD++TYN++++
Sbjct: 500 GHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AIQ F + K ++Q S + ++ + A+ E+ G PDV + L
Sbjct: 174 AIQCF--RLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVL 231
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ K+++ L+ + +G P + +FN I Q +L M +
Sbjct: 232 MHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV 291
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD TY+++I G C+ G LD A K++ M R L+PN + T+I+ C G +L
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
+ + ++K P V T + L+ GL K
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCK 377
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G PD +N+++ C+ ++ A+ ++ + R L P + T+I+ C+ G+ +
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + M+ P V T S L+ GL K Q AN +
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 105/191 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V+++ TL++ + K + G L +
Sbjct: 136 LYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKS 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 VMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 256 RVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 316 TLIDGXCKEGD 326
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 21/298 (7%)
Query: 99 IEHLLE----------HQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
IEHL++ +++SL G F +M + K G I+ A F + +G
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGL 167
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ +V S N + + DL + F L V + + D+++++++I C+ +D A
Sbjct: 168 RPSVVSFNTLMNGYIKIGDLD--EGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDA 225
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ EM G+ P+ +T+TTLI K+ R ++ ++ M+ + P+L T+N I
Sbjct: 226 NELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K QA+ L+ M G++PD++TY +I G C+ G L+ A + M+ + +
Sbjct: 286 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXD 345
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
Y +I LCQEG A M ++ + P + T + ++ N+ CK +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII------NEXCKKGDV 397
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 XDDVAYTALISGLCQEGRSVDAEKML 369
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I C+ G L +A+ ++ EM G+KPD ITYTTLI K+ E
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYR 334
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + + + I L + RS A K++ M G++P+ TY ++I C+
Sbjct: 335 KRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKK 394
Query: 305 GHLDMAKKVYSAMLGRRLMPN 325
G + K+ M +PN
Sbjct: 395 GDVWTGSKLLKEMQRXGYVPN 415
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P+ VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
+E+ EK I DI ++N +I FC G A ++ EM + + PDV+T++ LI+AF
Sbjct: 275 LFIEMQEK-EIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAF 333
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
K+ + L++ M+ + P+ T++ I + R A + L G PD
Sbjct: 334 VKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDI 393
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+T+N +I G+CR+ +D K+ M L+ N Y T+IH CQ GD N A + ++
Sbjct: 394 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 453
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
+ P+V T + LL+GL N +
Sbjct: 454 MISSGVCPNVVTCNTLLDGLCDNGK 478
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 27/310 (8%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKH 133
+++ DTVS L R+ + + H++ + ++ ++ G K G
Sbjct: 223 IVDGMCKMGDTVSALNLLRKMEEVSHIIPN-----------VVIYNTIIDGLWKDGRHSD 271
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + F +M + + N + S + L E+ E+ I D+ +F+ +I
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER-KINPDVVTFSALI 330
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
AF + G +A + EM + P +TY+++I F K NR + ++ L KGC
Sbjct: 331 NAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCS 390
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ TFN I +R KL+ M G+ + +TY +I GFC+ G L+ A+ +
Sbjct: 391 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 450
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV------------PSV 361
M+ + PN T++ LC G A M K +M+K+ + P V
Sbjct: 451 LQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDIDASRPFNGVEPDV 509
Query: 362 DTISALLEGL 371
T + L+ GL
Sbjct: 510 QTYNILICGL 519
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M + + A+ TF + G TV + N L L ++ + E + F
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGL-------CVEDRISEALDLF 174
Query: 181 H--IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-DNRP 237
H + ++ +F ++ C G + +A ++ M + G++P+ ITY T++ K +
Sbjct: 175 HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
N L + PN+ +N I L R A+ L MQ I PD VTYN +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I GFC SG A+++ ML R++ P+ + +I+ +EG F A + + + ++
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354
Query: 358 VPSVDTISALLEGLKKNNQ 376
+PS T S++++G K N+
Sbjct: 355 IPSTVTYSSMIDGFCKQNR 373
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E + + +SF I++K FC L A ++ KLG P V+T+ TL+ ++R
Sbjct: 108 EMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRI 167
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M C PN+ TF + L + R +A L+ M G++P+++TY +
Sbjct: 168 SEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 223
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G L++ +K+ ++PN IY T+I L ++G + A+ + +
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEV---SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQ 280
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T + ++ G + + A ++ +++R++
Sbjct: 281 EKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKI 319
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 136/333 (40%), Gaps = 16/333 (4%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM--RIMMLYGKAGMI 131
R +I + + + R D EH+ + +G I ++ Y +A +
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPT--KGCSPDIITFNTLIAGYCRAKRV 409
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ ++M G + + + DL A Q L E+ + ++ + N
Sbjct: 410 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS-GVCPNVVTCNT 468
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LI + +
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T++ I L + R +A ++ M PD VT+N +I G
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG 588
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ + Y T+I+ + + + A + ++ + P
Sbjct: 589 YCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
TI +L GL + +A ++ +Q V +
Sbjct: 649 TITIRNMLTGLWSKEELERAVAMLEDLQMSVGY 681
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 75/187 (40%), Gaps = 4/187 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ LD A + M + P VI + L+ + RP++ L M
Sbjct: 54 SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
N +F + ++ + + A G + + G P VT+N ++ G C + A +
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + ++ P+ T +++G+ K
Sbjct: 174 FHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229
Query: 374 NNQPCKA 380
A
Sbjct: 230 MGDTVSA 236
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I FC G +A ++ EM + + P+V+TY+ LI+A+ K+ + L+
Sbjct: 283 DLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELY 342
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G PN T+N I + R A + +M G PD T+N +I G+C +
Sbjct: 343 DEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGA 402
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D ++ M L+ + Y T+IH C GD N A + + + P + T
Sbjct: 403 KRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 462
Query: 365 SALLEGLKKNNQ 376
+ LL+GL N +
Sbjct: 463 NTLLDGLCDNGK 474
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 120/242 (49%), Gaps = 8/242 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A+D F+ M C+ V + + L E R ++A+ A L + E +Q + ++
Sbjct: 163 VSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAV-ALLDRMVED-GLQPNQITY 216
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ C++G A ++ +M+++ +KP+V+ Y+ +I +KD R + L+ M
Sbjct: 217 GTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQ 276
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG FP+L T+N I + R +A +L+ M I P+ VTY+ +I + +
Sbjct: 277 EKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFF 336
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+++Y ML R ++PN Y +MI C++ + A M K P V T + L+
Sbjct: 337 EAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLI 396
Query: 369 EG 370
+G
Sbjct: 397 DG 398
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 6/216 (2%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I D++SFNI+IK FC L A ++ KLG +PDV+T++TL+ ++R
Sbjct: 104 ERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRV 163
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M C PN+ TF + L + R +A L+ M G++P+++TY +
Sbjct: 164 SEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 219
Query: 298 IKGFCRSGHLDMAKKVYSAMLG-RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+ G C+ G A + M + PN IY +I L ++G + A+ + + +K
Sbjct: 220 VDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P + T + +++G + + +A ++ +++R++
Sbjct: 280 IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKI 315
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+FN +I +C +D ++ EM + G+ D TY TLI F L
Sbjct: 388 DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLS 447
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF-----------GIEPDEVT 293
M+ G P++ T N + L + + A ++ MQ+ G+EPD T
Sbjct: 448 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQT 507
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
YN++I G G A+++Y M R ++PN Y +MI+ LC++ + A M
Sbjct: 508 YNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMG 567
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTI 383
K++ P V T + L+ G CKA +
Sbjct: 568 SKSFSPDVVTFNTLVSGY------CKAGRV 591
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 31/332 (9%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKH 133
+++ DTVS L R+ + + H+ + ++ ++ G K G
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHI-----------KPNVVIYSAIIDGLWKDGRHSD 267
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + + +M G + + N + S Q L E+ E+ I ++ +++ +I
Sbjct: 268 AHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER-KINPNVVTYSALI 326
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
A+ + +A + EM G+ P+ ITY ++I F K NR + ++ +M KGC
Sbjct: 327 NAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS 386
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ TFN I +R +L+ M G+ D TYN +I GFC G L+ A +
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV------------PSV 361
M+ + P+ T++ LC G A M K +M+K+ + P V
Sbjct: 447 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKSKMDLDASRPFNGVEPDV 505
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
T + L+ GL + +A + + +PH
Sbjct: 506 QTYNILISGLINEGKFLEAEELY----KEMPH 533
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 14/307 (4%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMIK 132
R +I N + + R D EH+ + + + F ++ Y A I
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMF-YVMATKGCSPDVFTFNTLIDGYCGAKRID 406
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
+ ++M G + N + DL A ++ + DI + N +
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTL 465
Query: 193 IKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIGN 241
+ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 466 LDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M +G PN T++ I L + R +A ++ M PD VT+N ++ G+
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G +D +++ M R ++ + Y T+IH + G+ N A + ++ + P
Sbjct: 586 CKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT 645
Query: 362 DTISALL 368
TI ++L
Sbjct: 646 ITIRSML 652
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 120/281 (42%), Gaps = 10/281 (3%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
+ F + GA+R D LL ++ + G + A+D
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFL--------MEVPEKFH-IQFDIFSFN 190
M G + + N L L ++ LK A++ F ++ F+ ++ D+ ++N
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I G +A + EM G+ P+ ITY+++I+ K +R + +++ M K
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
P++ TFN + R +L M R GI D +TY +I GF + G+++ A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
++ M+ + P+ ++M+ L + + A M +D
Sbjct: 630 LDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLED 670
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 4/180 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P VI + L+ + RP++ L+ M K
Sbjct: 50 SGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIP 109
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +FN+ I+ + + A G + + G +PD VT++ ++ G C + A +
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + ++ P+ T +++G+ K
Sbjct: 170 FHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 225
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +FN ++ +C+ G +D + EM + G+ D ITY TLI F K ++
Sbjct: 574 DVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIF 633
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
M+ G +P+ T + L +K +A ++ +Q
Sbjct: 634 QEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ MV P++ FN + +V R L M+R
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG----DF 342
I D ++N++IK FC L A + + P+ + T++H LC E
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH-FSSNQLS 400
+L + MC+ P+V T + L+ GL + + +A +AL+ R V NQ++
Sbjct: 168 DLFHQMCR--------PNVVTFTTLMNGLCREGRVVEA---VALLDRMVEDGLQPNQIT 215
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 36/289 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG A++ F DM GC+ V + + L + + A + ++ E Q D+
Sbjct: 173 KAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE-VGCQPDV 231
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I + C+ ++++A + M+ G+ P V++YT+LI +R + + + N
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNE 291
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN----------- 295
M P++ TF++ I + +A ++ M G+EP+ +TYN
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
Query: 296 ------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
++I G+C +D AK++++ M+ + L PN Y T
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+IH CQ G A + KD ++P + T S LLEG K KA
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 36/279 (12%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ A+D F M G TV S + ++ L K A L E+ +I DI +F
Sbjct: 246 LVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMT-SLNIMPDIVTF 304
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+++I FC+ G + +A V+ M ++GV+P+VITY +L+ + L+++M+
Sbjct: 305 SLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV----------------- 292
+GC P++ ++++ I +R +A +L M G+ P+ V
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424
Query: 293 ------------------TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
TY+++++GFC+ G+L A +++ AM G L PN +Y +I
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+C+ G+ N A + + P V + ++ GL K
Sbjct: 485 SMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 92/156 (58%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+FS++I+I +C + +D+A + EM G+ P+ ++YTTLI AF + + L+
Sbjct: 370 DVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELF 429
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+L T++V ++ + +A +L MQ ++P+ V Y ++I C+S
Sbjct: 430 KDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS 489
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G+L+ A+K++S + L P+ +IY T+I+ LC+EG
Sbjct: 490 GNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q I +F +I C+ G +A + +M G +PDV TYTT+I+ K
Sbjct: 154 KLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETA 213
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
GL M GC P++ T++ I L R +A + M+ GI P V+Y +I
Sbjct: 214 AAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLI 273
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G C A + + M +MP+ + +I C+EG+ A + K +
Sbjct: 274 QGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333
Query: 359 PSVDTISALLEG 370
P+V T ++L+ G
Sbjct: 334 PNVITYNSLMHG 345
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ +I AFC++G L +A + +M G PD+ TY+ L+ F K +G
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY--LGKAFRLFR 465
Query: 248 VCKGCF--PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+G + PNL + + I + A KL + G++PD Y +I G C+ G
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A + + M PN Y +I Q D + A + + K +V T +
Sbjct: 526 LLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTTA 585
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ NI+I FC M +D + V+ ++ KLG++P +IT+TTLI NGL
Sbjct: 128 TLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLI------------NGL---- 171
Query: 248 VCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
CK G F QA +L M G +PD TY +I G C+ G
Sbjct: 172 -CKAGEFA-------------------QALELFDDMVARGCQPDVYTYTTIINGLCKMGE 211
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A + M P+ Y T+I LC++ N A + K P+V + ++
Sbjct: 212 TAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271
Query: 367 LLEGL 371
L++GL
Sbjct: 272 LIQGL 276
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFC 302
+N M+ + P + FN + +V R+ + A L M+ G+ P+ T N++I FC
Sbjct: 78 FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
H+D+ V + ++ L P + T+I+ LC+ G+F A + D + + P V
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197
Query: 363 TISALLEGLKKNNQPCKA 380
T + ++ GL K + A
Sbjct: 198 TYTTIINGLCKMGETAAA 215
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ + G ++ A + F DMH G + + + L+ + L +AF L + +++
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLG--KAFRLFRAMQGTYLK 473
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ + I+I + C+ G L+ A + E+ G++PDV YTT+I+ K+ +
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ M GC PN ++NV I+ + + +A +L+G M+ G DE T
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 157/334 (47%), Gaps = 3/334 (0%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A+ +K ERDP+ + +F + + N + + L ++F ++ +L K
Sbjct: 59 AVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYE 118
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKA 168
+E + +M + ++ + M+ F + + K ++ +++ L +L +S ++
Sbjct: 119 TCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNL 178
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTL 227
+ L+ +Q + FNI++K C+ G ++ A+LV+ EM++ G+ P+ ITY+TL
Sbjct: 179 SRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTL 238
Query: 228 ISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+ + +R + L+ M+ K G P+ TFNV I +A K++ M++ G
Sbjct: 239 MDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNG 298
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
P+ Y+ ++ GFC+ G + AK+ + + L + Y T+++ C+ G+ + A
Sbjct: 299 CNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAM 358
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + T + +L GL + +A
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 97/189 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++++ ++ FC++G + +A E++K G+K D + YTTL++ F ++ + L
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C + T+NV ++ L ++ RS +A +++ G+ ++ +Y +++ C +
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A K S M R + P+ + ++ LC+ G + + ++ +P +
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSW 481
Query: 365 SALLEGLKK 373
A++E + K
Sbjct: 482 GAVVESICK 490
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG ++ A M GC V + +A + + ++ + EV +K ++
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV-KKTGLKL 336
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + ++ FC G D+A ++ EM+ + D +TY ++ + R E +
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G N ++ + + L +A K + +M GI P T+N ++ C S
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCES 456
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G+ ++ +V L L+P K + ++ +C+E
Sbjct: 457 GYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ ++FS+NI+I+ FC G L+ EM++ P+V+TY T+I A+ K R +
Sbjct: 199 VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAF 258
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M +G PNL T+N+ I L R + + ++ M R G PD VTYN ++ G+
Sbjct: 259 KLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGY 318
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G+ A ++S ML L P+ Y ++I+ +C+ G+ N A + P+
Sbjct: 319 CKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNG 378
Query: 362 DTISALLEGLKK 373
T ++L+ G +
Sbjct: 379 VTYTSLINGFSQ 390
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 7/252 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A+ +M G V + + + + ++ +L ME ++ H++
Sbjct: 318 YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRA----MEFFDQMHVRG 373
Query: 185 ---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ ++ +I F + G +D+AY + EM + G P ++TY L++ R E
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL M KG P++ +++ I + +A ++ M G+ PD +TY+ +I+G
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C L+ A ++ ML + L+P+ Y ++I+ C+EGD N A + + +KK ++P
Sbjct: 494 CEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDT 553
Query: 362 DTISALLEGLKK 373
T + L+ GL K
Sbjct: 554 VTYNVLINGLNK 565
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 4/257 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K I A M L G + + + N + L ++ L E+ K
Sbjct: 248 YCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRK-GFAP 306
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N ++ +C++G +A ++ EM + G+ PDV+TYT+LI+ K +
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ I K +A ++ M R G P VTYN ++ G C S
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A + M G+ L P+ Y T+I C+ + + A+ M + ++K P T
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486
Query: 365 SALLEGL---KKNNQPC 378
S+L++GL ++ N+ C
Sbjct: 487 SSLIQGLCEQRRLNEAC 503
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 1/237 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + +M G V S N ++ + +L+ F E+ E+ ++ ++N VI
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEM-ERNRCLPNVVTYNTVI 245
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
A+C++ +D+A+ ++ M G++P+++TY +I+ + R E +G+ M KG
Sbjct: 246 GAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA 305
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + QA L M R G+ PD VTY +I C++G+L+ A +
Sbjct: 306 PDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M R L PN Y ++I+ Q+G + AY + + ++ + P++ T +ALL G
Sbjct: 366 FDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 24/281 (8%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM--EVPEKFHIQFD 185
+G ++ A+ M G V S + + ++L +AF M E+ EK + D
Sbjct: 426 SGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELD--RAFQMNAEMVEK-GVSPD 482
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+++ +I+ CE L++A + EM + PD TYT+LI+ + K+ L +
Sbjct: 483 AITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHD 542
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVI----- 298
M+ KG P+ T+NV I L + R+ +A +L L++ F E P+ +TY+ +I
Sbjct: 543 EMIKKGFLPDTVTYNVLINGLNKQARTREAKRL--LLKLFYDESIPNGITYDTLIESCSD 600
Query: 299 ----------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
KGFC G ++ A +V+ +M+ R PN +Y +IH C++G+ + A+ +
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
K+ + ++P TI AL++ L + N ++ + R
Sbjct: 661 YKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILR 701
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
EM GV +V +Y LI F E+G + M C PN+ T+N I +
Sbjct: 193 EMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLK 252
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A KL+ M G+EP+ +TYN+VI G CR G ++ V + M + P+ Y
Sbjct: 253 RIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN 312
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
T+++ C+ G+F+ A ++ + ++ P V T ++L+ N CKA +
Sbjct: 313 TLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLI------NTMCKAGNL 359
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKL-GVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
F++V+K+ + ++KA L +V++ KL G P V++Y ++ + + +P I
Sbjct: 135 FDLVVKSCSYLNFIEKA-LNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI-------- 185
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
A K+ M G+ + +YN++I+GFC +G+L
Sbjct: 186 --------------------------FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNL 219
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+M + + M R +PN Y T+I C+ + A+ + + + P++ T + +
Sbjct: 220 EMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMV 279
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ GL + + + + ++A + R+
Sbjct: 280 INGLCRVGRIEETSGVLAEMDRK 302
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG+ + +++ F M G +V + N+ L +L + E+ + +
Sbjct: 151 YGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTP 210
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++FN +I FC+ ++D+A+ + EM+ PDV+TY T+I + + +I + L
Sbjct: 211 DSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLL 270
Query: 245 N-------------------------------------LMVCKGCFPNLATFNVRIQHLV 267
N M+ +G PN T+N I+ L
Sbjct: 271 NGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLS 330
Query: 268 NKRRSWQANK-LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
R + L+G PD T+N++IK C +GHLD A KV+ ML +L P+
Sbjct: 331 EAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 390
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
Y +I LC +F+ A + + +K
Sbjct: 391 ASYSVLIRTLCLRNEFDKAETLFNELFEK 419
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ F++M G K + N +K L+E+ I+ FL+ D +FN
Sbjct: 300 IDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFN 359
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN----- 245
I+IKA C+ G LD A V EM + + PD +Y+ LI N + L+N
Sbjct: 360 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEK 419
Query: 246 --LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFC 302
L+ C P A +N+ ++L ++ QA K+ LM+R +P +Y +I G C
Sbjct: 420 EVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPS--SYRTLITGLC 477
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G A ++ ML R +P+ + Y+ +I L + G+ LA+ + ++ +++P
Sbjct: 478 REGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 537
Query: 363 TISALLEGLKK 373
T ++L L K
Sbjct: 538 TFHSVLAELVK 548
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 43/292 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQ 183
+ K M+ A F +M LY C V + N + L + +K L + +K +
Sbjct: 222 FCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVH 281
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNG 242
+I S+ +++ +C +D+A LV EM G+KP+ +TY TLI + +R EI
Sbjct: 282 PNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGF 341
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L P+ TFN+ I+ + A K+ M + PD +Y+++I+ C
Sbjct: 342 LIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 401
Query: 303 RSGHLDMAKKVYS------AMLG-------------------------------RRLMP- 324
D A+ +++ +LG R+LM
Sbjct: 402 LRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKR 461
Query: 325 ---NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ Y+T+I LC+EG F AY + +++ +VP +T L++GL K
Sbjct: 462 GAQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLK 513
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 15/202 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ +I C G AY ++V M + PD TY LI K + +
Sbjct: 465 DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTL 524
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ----RFGIEPDEVTYNLVIKG 300
M+ P TF+ + LV ++ + + L+ +M R I+ LV
Sbjct: 525 QRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSS 584
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIY--QTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
A+K + ++ R L N + + ++ +LC+ A+ + ++K+ +
Sbjct: 585 ---------AQKEKAFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQM 635
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
+DT + ++EGL K+ + +A
Sbjct: 636 VDIDTCNTIIEGLCKHKRHSEA 657
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 11/290 (3%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGC 146
R+ ++ ++ +LE ++P I +++ G K+G I +A+ M++
Sbjct: 161 RIGKTKKATWVMEILEQSGAVPD-----VITYNVLISGYCKSGEIDNALQVLDRMNV--- 212
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
V + N L+ L +S LK L +K D+ ++ I+I+A C+ + +A
Sbjct: 213 APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK-ECYPDVITYTILIEATCKESGVGQAM 271
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
++ EM+ G KPDV+TY LI+ K+ R + N M GC PN+ T N+ ++ +
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ R A KL+ M R G P VT+N++I CR G L A + M PN
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y ++H C+E + A + + P + T + LL L K+ +
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 441
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM GC +V + N + L L L ++P + S+N ++ FC+
Sbjct: 346 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP-MHGCTPNSLSYNPLLHGFCKE 404
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY TL++A KD + ++ + N + KGC P L T+
Sbjct: 405 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ +A KL+ M+R G++PD +TY+ ++ G R G +D A K + + G
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ PN Y +++ LC+ + A + K P+ T + L+EG+
Sbjct: 525 LGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +I+ FC +G KA VM +++ G PDVITY LIS + K EI N L
Sbjct: 148 DIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSG--EIDNALQ 205
Query: 245 NL-----------------MVC-----------------KGCFPNLATFNVRIQHLVNKR 270
L +C K C+P++ T+ + I+ +
Sbjct: 206 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 265
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
QA KL+ M+ G +PD VTYN++I G C+ G LD A K + M PN +
Sbjct: 266 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 325
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ +C G + A + D ++K PSV T + L+
Sbjct: 326 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G++ A+D M ++GC S N L + + + +AI+ + V + D
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP--D 425
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N ++ A C+ G +D A ++ ++ G P +ITY T+I K + E L +
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG P++ T++ + L + + +A K ++ GI P+ +TYN ++ G C+S
Sbjct: 486 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 545
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D A + M+ +R P Y +I + EG
Sbjct: 546 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 580
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + AM +M G K V + N + + + L FL +P + Q ++
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNV 321
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ NI++++ C G A ++ +M + G P V+T+ LI+ + +
Sbjct: 322 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 381
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++N + +++ +A + + +M G PD VTYN ++ C+ G
Sbjct: 382 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 441
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D+A ++ + + + P Y T+I L + G A + + +K P + T S+
Sbjct: 442 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 501
Query: 367 LLEGLKKNNQ 376
L+ GL + +
Sbjct: 502 LVSGLSREGK 511
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L+ + + M G PD+I T+LI F + + + + ++ G P++ T+
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
NV I +S + + + ++ R + PD VTYN +++ C SG L A +V L
Sbjct: 188 NVLISGYC---KSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK------ 373
+ P+ Y +I C+E A + + K P V T + L+ G+ K
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304
Query: 374 -----NNQP---CKANTI 383
NN P C+ N I
Sbjct: 305 AIKFLNNMPSYGCQPNVI 322
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + + N L L + + L ++ K + ++N VI ++G ++
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITYNTVIDGLSKVGKTER 479
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ EM++ G+KPD+ITY++L+S ++ + + ++ + G PN T+N +
Sbjct: 480 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 539
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L R++ +A + M +P E TY ++I+G G A + + + R L+
Sbjct: 540 GLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 599
Query: 325 NRKIYQTMI 333
Q +
Sbjct: 600 KSSAEQVAV 608
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFD 185
K G + A++ + GC + + N + L++ + +AI+ L++ + ++ D
Sbjct: 438 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK--LLDEMRRKGLKPD 495
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I +++ ++ G +D+A +++ LG++P+ ITY +++ K + +
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 555
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
M+ K C P AT+ + I+ + + + +A L+ + G+
Sbjct: 556 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 7/265 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ +M GC ++ + + ++ + L E+ K ++ D+ +
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHK-GLEADLIVYT 251
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I+ FC+ G LD+ + E+ + G P ITY TLI F K R + + ++ M+ +
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN+ T+ I L ++ +A +L+ LM + EP+ VTYN++I C+ + A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN----LAYIMCKDSMKKNWVPSVDTISA 366
++ M RR P+ Y +++ LC +GD + L Y+M KDS + P V + +A
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISFNA 429
Query: 367 LLEGLKKNNQPCKANTIMALVQRRV 391
L+ GL K N+ +A I L+ ++
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKL 454
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F+++++NI++K C KA ++ EM++ + PDV++Y T+I F + E L
Sbjct: 140 FNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQL 199
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N M GC +L T+ + I + +A L+ M+ G+E D + Y +I+GFC
Sbjct: 200 ANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCD 259
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD K ++ +L R P Y T+I C+ G A + + M++ P+V T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYT 319
Query: 364 ISALLEGL 371
+ L++GL
Sbjct: 320 YTGLIDGL 327
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG--VKPDVITYTTLISA 230
++E+ +K + D ++N ++ C G LD+A ++ M K PDVI++ LI
Sbjct: 374 IVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHG 433
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG---I 287
K NR +++L+V K ++ T N+ + + +S NK M L ++ I
Sbjct: 434 LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTL---KSGDVNKAMELWKQISNSKI 490
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ TY +I GFC++G L++AK + M L P+ Y ++ LC++G + A+
Sbjct: 491 VPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWR 550
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ ++ + + P V + + +++G K A +++
Sbjct: 551 LFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLL 587
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I FC+ G+L+ A ++ +M+ + P V Y L+S+ K + L+ M
Sbjct: 496 TYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
FP++ +FN+ I + A L+ M G+ PD TY+ +I F + G+L
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYL 615
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A + M+ P+ I +++ Y +G+
Sbjct: 616 DEAISFFDKMIDSGFEPDAHICDSVLKYCISQGE 649
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI + NI++ + + G ++KA + ++ + P+ TYTT+I F K + GL
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M P++ +N + L K QA +L MQR PD +++N++I G ++
Sbjct: 518 CKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKA 577
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + A+ + M L P+ Y +I+ + G
Sbjct: 578 GDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLG 613
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F +N ++ + C+ G LD+A+ + EMQ+ PDVI++ +I K + L
Sbjct: 529 VFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLV 588
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P+L T++ I + +A M G EPD + V+K G
Sbjct: 589 GMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQG 648
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-QEGDFNLA 345
D + ++ + ++ ++++ T++ Y+C G+ ++A
Sbjct: 649 ETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIA 689
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
++ + L+ F + + +G+ LM+ +G N+ +N+ ++ L +A L+
Sbjct: 108 VSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLRE 167
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ + PD V+YN VI+GFC L+ A ++ + M G + + +I C+ G
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ A + K+ K + ++L+ G
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRG 256
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 7/196 (3%)
Query: 154 NAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA---YLVM 209
N+ L L DL +A + + + + + D+ SFN +I C+ L +A Y ++
Sbjct: 391 NSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLL 450
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
VE KLG D++T L+++ K LW + PN T+ I
Sbjct: 451 VE--KLGA-GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
A L+ M+ + P YN ++ C+ G LD A +++ M P+ +
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567
Query: 330 QTMIHYLCQEGDFNLA 345
MI + GD A
Sbjct: 568 NIMIDGSLKAGDIKSA 583
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + F M G +++ NA L + + + + E+ + I+ +++FNI+I
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM-FRLKIKSTVYTFNIMI 243
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ G L KA + M+ LGVKP+V+TY T+I + R E + ++M +G
Sbjct: 244 NVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVE 303
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+ I + + +A+ ++ M+ G+ P VTYN +I G+C G L A
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGY 363
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
M+ R ++P Y +IH L EG + A M KD VP T + L+ G
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 35/232 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I +C G KA+ + EM G++P ++TYT+LI K NR + + L+
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469
Query: 245 NLMVCKGCFPNLATFNVRIQ-HLVN----------------------------------K 269
++ +G P+L FN I H N +
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ +A +L+ M+R GI PD ++YN +I G+ + G ++ A + ML P Y
Sbjct: 530 GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTY 589
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
+I LC+ +LA + K+ + K P T +L+EG+ K + +A+
Sbjct: 590 NALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+A CE+ D A+ M++ GV P + T+ ++S F K N+ E L+ M
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ TFN+ I L + + +A +G M+ G++P+ VTYN VI G+C G ++
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ V M R + P+ Y ++I +C+ G A + + + +P+ T + L+
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348
Query: 369 EG 370
+G
Sbjct: 349 DG 350
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 7/296 (2%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
R+ GAR + +++++ P G ++ M K G ++ A M G
Sbjct: 285 GRVEGAR---MVLDIMKNRGVEPDSYTYGSLISGMC---KGGKLEEASGILEKMKEIGLL 338
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
T + N + DL + E+ + I + ++N++I A G +D+A
Sbjct: 339 PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRR-AILPTVSTYNLLIHALFLEGKMDEADG 397
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ +M G+ PD ITY LI+ + + + L + M+ KG P L T+ I L
Sbjct: 398 MIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLS 457
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ R A+ L + R G PD + +N +I G C +G+LD A + M R ++P+
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEV 517
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
Y T++ C+EG A + K+ ++ P + + L+ G K A TI
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I +FN ++ F ++ + +++ EM +L +K V T+ +I+ K+ + +
Sbjct: 201 IETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIG 260
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PN+ T+N I ++ R A ++ +M+ G+EPD TY +I G C+ G
Sbjct: 261 SMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A + M L+P Y T+I C +GD A+ + +++ +P+V T +
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380
Query: 366 ALLEGL 371
L+ L
Sbjct: 381 LLIHAL 386
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I +C G L KA+ EM + + P V TY LI A + + + + +G+ M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P+ T+N+ I + +A L M GI+P VTY +I + +
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ ++ P+ ++ +I C G+ + A+ + K+ K+N VP T + L
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522
Query: 368 LEGLKKNNQPCKANTIMALVQRRV---PHFSSNQL 399
++G + + +A ++ ++RR H S N L
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D S+N +I + + G ++ A+ + EM +G P ++TY LI K+ + ++
Sbjct: 547 IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAE 606
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
L MV KG P+ +T+ I+ + S +A+
Sbjct: 607 ELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+FNI+I A C+ G +D+A+ ++ M G PDV+TY+TLIS R + L
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV + C P + T N I L R +A +++ M G PD VTYN ++ G CR+G
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A+++ S M+ R L PN Y ++ LC+ A + P++ T +A
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435
Query: 367 LLEGLKKNNQ 376
L+ G Q
Sbjct: 436 LILGFCSAGQ 445
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 72 HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAG 129
+ R V + +++ + LA A + + L QK L G + +++G A
Sbjct: 2 NERNVSPDSWSYGILIDGLAKAGKLNDARDLF--QKLLHSGVTPSTVAYTSLIHGLCMAN 59
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
A + F DM+ GC + + N + + L+ + ++ E H+ D+ ++
Sbjct: 60 SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVP-DVVTY 118
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N V+ C+ G +++A L+ EM++LG P+ ++ T+I + ++ + +++ M
Sbjct: 119 NTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEA 178
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+ P+ ++ + I L + +A KL M GI P VTYN+VI G C + LD
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDE 238
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +++ +M + P+R + +I C+ G + A+ + K VP V T S L+
Sbjct: 239 ALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 370 GL 371
GL
Sbjct: 299 GL 300
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 11/264 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAA-LKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
K+G ++ A+ F +M GC +S N L + +S+ +A Q F E I D
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF--HEMEARDIPPD 184
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS----AFYKDNRPEIGN 241
+S+ I+I + G L++AY + M G+ P +TY +I A+ D E
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE--- 241
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M KGC P+ TFN+ I + + +A +L+ M G PD VTY+ +I G
Sbjct: 242 -LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C +D A+ + M+ R+ P T+IH LC+ G A + + P V
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 362 DTISALLEGLKKNNQPCKANTIMA 385
T + L+ G + Q +A +++
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLS 384
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E K + + + N +I C+ G + +A V+ M G PDV+TY TL+
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + E L + MV +G PN+ T+ + L R +A + M+ G P+
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
TY +I GFC +G +D K++ M+ + P+ +Y T+ LC+ G
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D +S+ I+I + G L+ A + ++ GV P + YT+LI N +
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +GC P+ T+NV I + +A L+ M G PD VTYN V+ G
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+SG ++ A +++ M PNR+ + T+I LCQ+ + A + + ++ P
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 361 VDTISALLEGLKKNNQ 376
+ L++GL K +
Sbjct: 185 SWSYGILIDGLAKAGK 200
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K GM++ A D M G V + N + L +S ++ E+ E+ +
Sbjct: 92 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM-ERLGCTPNR 150
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S N +I C+ +D+A V EM+ + PD +Y LI K + L+
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRR 210
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+NV I + +A +L M+ G P T+N++I C+ G
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ M +P+ Y T+I LC + A + +D +K+ P+V T +
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 367 LLEGLKKNNQPCKANTI 383
L+ GL CKA I
Sbjct: 331 LIHGL------CKAGRI 341
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F M GC+ + + N + + + L + + H+ D+ +++
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVP-DVVTYS 294
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C + +D A ++ +M K KP V+T TLI K R + + + MV
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T+N + ++ +A +L+ M G+ P+ VTY ++ G C++ L A
Sbjct: 355 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
V++ M PN Y +I C G +
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 17/273 (6%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHA 134
+ + + +S L R D HLLE + + + + + +++G KAG IK A
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDM--VKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ M G V + N + + + + L ++ + + ++ ++ ++
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVS 403
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C+ L +A V +M+ G P++ TYT LI F + + G L+ MVC G P
Sbjct: 404 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP-------DEVTYNLVIKGFCRSGHL 307
+ + L RS +A +++ R G E DEV Y + G +G +
Sbjct: 464 DHVVYGTLAAELCKSGRSARALEIL----REGRESLRSEAWGDEV-YRFAVDGLLDAGKM 518
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+MA M+ +P + +++ LC+ G
Sbjct: 519 EMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + V PD +Y LI K + L+ ++ G P+ + I L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A +L M R G P VTYN++I C+ G L+ A + M+ +P+ Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL---KKNNQPCK 379
++ LC+ G A ++ + + P+ + + ++ GL K +Q C+
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 171
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 137/270 (50%), Gaps = 7/270 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + + K + F E+ E
Sbjct: 53 LITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 112
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P ++Y TL++ + + + G
Sbjct: 113 Y-PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 171
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + A++L M G+ P+ VT+ +I G
Sbjct: 172 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 231
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + D +K P
Sbjct: 232 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 291
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRR 390
T + L++G CK +++ + R
Sbjct: 292 KITYTTLIDGC------CKEGVLVSAFEHR 315
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 13/279 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA------LKVLTESRDLKAIQ 170
F +M + K G I+ A F + +G + + S N L VL E LK+
Sbjct: 119 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKS-- 176
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A L +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI
Sbjct: 177 AMLAS-----GVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 231
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K+ R ++ ++ M+ + P+L T+N I L K QA+ L+ M R G++PD
Sbjct: 232 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 291
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
++TY +I G C+ G L A + ++ + + +Y +I LCQEG A M +
Sbjct: 292 KITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 351
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P T + ++ K K + ++ +QR
Sbjct: 352 EMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 390
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + ++ K ++ D
Sbjct: 234 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRK-GLKPDK 292
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G+L A+ + + ++ D + YT LIS ++ R +
Sbjct: 293 ITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 352
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 353 MLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 7/288 (2%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
R+ ++ ++ +LE ++P ++ Y K+G I +A+ M++
Sbjct: 104 RIGKTKKATWVMEILEQSGAVPDVITYNVLIS---GYCKSGEIDNALQVLDRMNV---AP 157
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
V + N L+ L +S LK L +K D+ ++ I+I+A C+ + +A +
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQK-ECYPDVITYTILIEATCKESGVGQAMKL 216
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ EM+ G KPDV+TY LI+ K+ R + N M GC PN+ T N+ ++ + +
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 276
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R A KL+ M R G P VT+N++I CR G L A + M PN
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y ++H C+E + A + + P + T + LL L K+ +
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 384
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM GC +V + N + L L L ++P + S+N ++ FC+
Sbjct: 289 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP-MHGCTPNSLSYNPLLHGFCKE 347
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY TL++A KD + ++ + N + KGC P L T+
Sbjct: 348 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ +A KL+ M+R G++PD +TY+ ++ G R G +D A K + + G
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ PN Y +++ LC+ + A + K P+ T + L+EG+
Sbjct: 468 LGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +I+ FC +G KA VM +++ G PDVITY LIS + K EI N L
Sbjct: 91 DIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSG--EIDNALQ 148
Query: 245 NL-----------------MVC-----------------KGCFPNLATFNVRIQHLVNKR 270
L +C K C+P++ T+ + I+ +
Sbjct: 149 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 208
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
QA KL+ M+ G +PD VTYN++I G C+ G LD A K + M PN +
Sbjct: 209 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 268
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ +C G + A + D ++K PSV T + L+
Sbjct: 269 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G++ A+D M ++GC S N L + + + +AI+ + V + D
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP--D 368
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N ++ A C+ G +D A ++ ++ G P +ITY T+I K + E L +
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG P++ T++ + L + + +A K ++ GI P+ +TYN ++ G C+S
Sbjct: 429 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 488
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D A + M+ +R P Y +I + EG
Sbjct: 489 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 523
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + AM +M G K V + N + + + L FL +P + Q ++
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS-YGCQPNV 264
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ NI++++ C G A ++ +M + G P V+T+ LI+ + +
Sbjct: 265 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 324
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++N + +++ +A + + +M G PD VTYN ++ C+ G
Sbjct: 325 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 384
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D+A ++ + + + P Y T+I L + G A + + +K P + T S+
Sbjct: 385 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 444
Query: 367 LLEGLKKNNQ 376
L+ GL + +
Sbjct: 445 LVSGLSREGK 454
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L+ + + M G PD+I T+LI F + + + + ++ G P++ T+
Sbjct: 71 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
NV I +S + + + ++ R + PD VTYN +++ C SG L A +V L
Sbjct: 131 NVLISGYC---KSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK------ 373
+ P+ Y +I C+E A + + K P V T + L+ G+ K
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247
Query: 374 -----NNQP---CKANTI 383
NN P C+ N I
Sbjct: 248 AIKFLNNMPSYGCQPNVI 265
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + + N L L + + L ++ K + ++N VI ++G ++
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITYNTVIDGLSKVGKTER 422
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ EM++ G+KPD+ITY++L+S ++ + + ++ + G PN T+N +
Sbjct: 423 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 482
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L R++ +A + M +P E TY ++I+G G A + + + R L+
Sbjct: 483 GLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVK 542
Query: 325 NRKIYQTMI 333
Q +
Sbjct: 543 KSSAEQVAV 551
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFD 185
K G + A++ + GC + + N + L++ + +AI+ L++ + ++ D
Sbjct: 381 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK--LLDEMRRKGLKPD 438
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I +++ ++ G +D+A +++ LG++P+ ITY +++ K + +
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 498
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
M+ K C P AT+ + I+ + + + +A L+
Sbjct: 499 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 532
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q + +FN ++ C + A + EM K+G +PDVITY+T+I+ K
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L M KGC PN+ +N I L R +A M + GI PD TY+ ++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GFC G ++ A ++ M+ R ++PN+ + +I LC++ + A+++ + +K
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P V T +AL++G +Q +A + ++ R+
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK 214
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I + C+ ++ +A EM K G+ PDV TY++++ F R L+
Sbjct: 79 NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLF 138
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + PN TF + I L KR +A + M G+EPD TYN ++ G+C
Sbjct: 139 KQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSR 198
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A+K+++ M + PN + Y +I+ C+ G + A + + K+ P + T
Sbjct: 199 SQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTY 258
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ G + +P +A ++
Sbjct: 259 STLMRGFCQVGRPQEAQELL 278
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ AMD F +M G V + ++ L + + ++ E+ I + +F
Sbjct: 95 LVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKV-TF 153
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
I+I C+ ++ +A+LV M + G++PDV TY L+ + ++ + L+N+M
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDR 213
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KGC PN+ ++N+ I R +A L+ M + PD TY+ +++GFC+ G
Sbjct: 214 KGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQE 273
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+++ M L+PN Y ++ LC+ G + A+ + K + P++ + L+E
Sbjct: 274 AQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIE 333
Query: 370 GL 371
G+
Sbjct: 334 GM 335
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 4/277 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K MI A F M G + V + NA + + Q L + ++ ++
Sbjct: 162 KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQK-LFNIMDRKGCAPNV 220
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+NI+I C+ G +D+A ++ EM + PD+ TY+TL+ F + RP+ L
Sbjct: 221 RSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKE 280
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PNL T+++ + L +A +L+ MQ IEP+ Y ++I+G C G
Sbjct: 281 MCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGK 340
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A++++S + + + P Y MI L + G N A + ++ +P+ T +
Sbjct: 341 LEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNV 400
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFK 403
+++G +N A + L++ V S S F+
Sbjct: 401 IIQGFLRNGDTPNA---VRLIEEMVGKGFSADSSTFR 434
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + R K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + + K P
Sbjct: 257 HCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KFTYTTLIDGCCKEGD 332
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 262 RVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A K M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K K + ++ +QR
Sbjct: 382 GLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P++ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 130/252 (51%), Gaps = 5/252 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM G + N + +L +S L + ++PEK + + +SF I+++ +C
Sbjct: 46 DMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEK-GCEPNEYSFGILVRGYCRA 104
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G K ++ EM++LG P+ + Y TLIS+F K+ + + L + M G P++ TF
Sbjct: 105 GFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTF 164
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQ---RFGI-EPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
N RI L + + +A+++ MQ G+ +P+ +TYNL++ GFC+ G L+ A+ ++
Sbjct: 165 NARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFE 224
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M + NR+ Y + L + G A ++ K+ + P+V + + +++GL KN
Sbjct: 225 KMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNG 284
Query: 376 QPCKANTIMALV 387
A +M L+
Sbjct: 285 VLFDARMLMRLM 296
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 144/346 (41%), Gaps = 64/346 (18%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+ML G K GM++ A F M + +S N L L L Q L E+ +
Sbjct: 205 LMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVD- 263
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ +++S+NIV+ C+ G+L A ++M M GV PD +TYTTL+ + +
Sbjct: 264 MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE 323
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
N + M+ GC PN T N+ + L + R +A +L+ M G D VT N+VI
Sbjct: 324 ANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVID 383
Query: 300 GFCRSGHLDMAKKVY-------SAMLG----------------RRLMP------------ 324
G C +G LD A ++ SA LG ++ MP
Sbjct: 384 GLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGL 443
Query: 325 -----------------------NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+ IY IH C+EG + A+ + KD KK ++
Sbjct: 444 CKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTL 503
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
T ++L+ GL NQ + I L+ S +S + ++LS
Sbjct: 504 QTYNSLIMGLGSKNQIFE---IYGLIDEMRERGVSPDVSIYNNVLS 546
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQ---KLGV-KPDVITYTTLISAFYKDNRPEIG 240
D+ +FN I A C G + +A + +MQ LG+ +P++ITY ++ F K+ E
Sbjct: 160 DVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEA 219
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M N ++N+ + LV + +A ++ M G+EP+ +YN+V+ G
Sbjct: 220 RALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDG 279
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G L A+ + M ++P+ Y T++H C G + A + ++ M+ P+
Sbjct: 280 LCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPN 339
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
T + LL L K + +A ++
Sbjct: 340 NYTCNILLYSLWKEGRISEAEELL 363
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ +I C+ G + +A +EM ++PD Y I +F K+ + +
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVL 491
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC L T+N I L +K + ++ L+ M+ G+ PD YN V+ C
Sbjct: 492 KDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G + A V ML + + PN + +I C+ DF+
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFS 590
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I+ +N+++++ + G +D + +M GV P+ T+ LI + L++
Sbjct: 21 IYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFD 80
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KGC PN +F + ++ + + +L+G M+R G P++V YN +I FC+ G
Sbjct: 81 KMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEG 140
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D A+K+ M L P+ + I LC G
Sbjct: 141 KTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSG 175
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + Y L+ + K+ R + + L MV G P TFNV I L + A +L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M G EP+E ++ ++++G+CR+G ++ M PN+ +Y T+I C+
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
EG + A + + K P V T +A + L + + +A+ I +Q
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQ 188
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 24/272 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A + +M GC + N L L + + + L ++ EK ++
Sbjct: 315 YCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV-I 373
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-----------------------VKPDV 221
D + NIVI C G LDKA ++ M G PD+
Sbjct: 374 DTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDL 433
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
I+Y+T+IS K R + M+ K P+ A ++V I + + A +++
Sbjct: 434 ISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G TYN +I G + + M R + P+ IY ++ LC+ G
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + ++K P++ + S L++ K
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 102/237 (43%), Gaps = 34/237 (14%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++Q D +++ I +FC+ G + A+ V+ +M+K G + TY +LI N+
Sbjct: 463 NLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEI 522
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL + M +G P+++ +N + L R A ++ M + GI P+ +++++IK
Sbjct: 523 YGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKA 582
Query: 301 FCRS----------------------------------GHLDMAKKVYSAMLGRRLMPNR 326
FC++ G + AK+++ L R
Sbjct: 583 FCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGN 642
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+Y+ +I +LC++ + A + + K + + +++GL K +A+ +
Sbjct: 643 FLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADEL 699
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G K A F +M G + + N + L R++KA +A +M+ + + I +
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC--REMKANEANKVMDQMKSYVINPN 337
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I FC +G L KA + +++ G+ P ++TY L+S F + +
Sbjct: 338 LITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVK 397
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G P+ T+ + I A +L M+ G+ PD TY+++I GFC G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A +++ +M+ + L PN IY TMI C+EG A + +D +K P+V + S
Sbjct: 458 QMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYS 517
Query: 366 ALLEGLKK 373
L+ L K
Sbjct: 518 YLIRVLCK 525
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 35/247 (14%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA-------- 230
K + D++SF IVIK CE G ++K++ ++VE+++ G P+V+ YTTLI
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 231 ---------------------------FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+K+ + G ++ M G FPNL T+N +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R+ A K+ M+ G+ + VTYN +I G CR + A KV M +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN Y T+I C G A +C+D + PS+ T + L+ G + A +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395
Query: 384 MALVQRR 390
+ ++ R
Sbjct: 396 VKEMEER 402
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 125/249 (50%), Gaps = 1/249 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG I+ + D ++ +G V + + +++ + E+ KF + +
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG-KFGLVANE 233
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++I + GI + + + +MQ+ GV P++ TY +++ KD R + +++
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDE 293
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N+ T+N I L + ++ +ANK+M M+ + I P+ +TYN +I GFC G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A + + R L P+ Y ++ C++GD + A M K+ ++ PS T +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 367 LLEGLKKNN 375
L++ +++
Sbjct: 414 LIDTFARSD 422
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-D 185
K G I+ A D F++M +G + + L ++ K Q F M + H F +
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK--QGFEMYEKMQEHGVFPN 267
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++N V+ C+ G A+ V EM++ GV +++TY TLI ++ + N + +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M PNL T+N I + + +A L ++ G+ P VTYN+++ GFCR G
Sbjct: 328 QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTI 364
A K+ M R + P++ Y +I + + A I + SM++ VP V T
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETA-IQLRSSMEELGLVPDVHTY 446
Query: 365 SALLEGL 371
S L+ G
Sbjct: 447 SVLIHGF 453
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N+++ FC G A ++ EM++ G+KP +TYT LI F + + E L +
Sbjct: 373 LVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRS 432
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I K + +A++L M +EP+EV YN +I G+C+ G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEG 492
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A +++ M + L PN Y +I LC+E A + + + PS DTI
Sbjct: 493 SSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS-DTIC 551
Query: 366 ALLEGLKKNN 375
L+ K ++
Sbjct: 552 NLISRAKTDS 561
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++++I FC G +++A + M + ++P+ + Y T+I + K+ L+
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLF 501
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
M K PN+A+++ I+ L +R+ +A L+ M GI+P + NL+
Sbjct: 502 RDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 32/252 (12%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+ML G AGM+ A M G R V+S N L L ++ + Q L E+ +
Sbjct: 284 VMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHE 343
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGV-KPDVITYTTLISAFYKDNR 236
+Q + +++NI++ C+ G KA+ V + + + GV PDV+TYT+L+ A+
Sbjct: 344 -GVQPNSYTYNIIVDGLCKEG---KAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGN 399
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
N + + M KGC PNL T+NV +Q L+ R+ + +L+ M G D + N+
Sbjct: 400 TTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNI 459
Query: 297 VIKGFCRSGHLDMAKKVYSAMLG------RRL-----------------MPNRKIYQTMI 333
+I G CR+ L+MA + M RRL +P+R Y T++
Sbjct: 460 IIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLM 519
Query: 334 HYLCQEGDFNLA 345
+ LC+EG F+ A
Sbjct: 520 NALCKEGRFDEA 531
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 124/273 (45%), Gaps = 12/273 (4%)
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
G + R G++ +D +M+L C V +V R + ++A
Sbjct: 178 GILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQ--- 234
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL---GV-KPDVITYTTLISAF 231
+ ++ +FN I A C+ G + +AY + +MQ+ G+ +PD +T+ ++S F
Sbjct: 235 -----GLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGF 289
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ L ++M C G + ++N + LV R +A +L+ M G++P+
Sbjct: 290 CDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNS 349
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TYN+++ G C+ G ++V + + P+ Y +++H C +G+ A + +
Sbjct: 350 YTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDE 409
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+K P++ T + LL+ L K + + ++
Sbjct: 410 MAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLL 442
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ ++ A C+ G D+A +VEM + PD + Y T I + + + +
Sbjct: 511 DRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVL 570
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C P+ ++N+ I K++S + KLM M+ GI + +TYN +IK FC
Sbjct: 571 RDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGR 630
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G ++ A + ML ++PN + +I C+ DF+ A
Sbjct: 631 GMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAA 671
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 2/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G A+ DM C + +S N + E + I + E+ EK I
Sbjct: 557 YCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEK-GISS 615
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK+FC G+++KA ++ EM + + P+V ++ LI AF K ++
Sbjct: 616 NVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF 675
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ + C + + L R +A ++ I Y +I G C
Sbjct: 676 DVALST-CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDV 734
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D A + + + + + +I L + G
Sbjct: 735 SEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESG 770
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PDV T L+ A R ++ +++ M + F + + + RS A
Sbjct: 138 GATPDVFTRNALLEALSAAGRMDLARRVFDAMPARNEFSS----GILARGYCRAGRSADA 193
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ M + V N V+ GFCR G +D A+++ M + L PN + I
Sbjct: 194 LAVLDAMPEMNL----VVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISA 249
Query: 336 LCQEGDFNLAYIMCKDSMKKNW---VPSVDTIS 365
LC+ G AY + D M++ W +P D ++
Sbjct: 250 LCKAGRVLEAYRIFND-MQEAWEQGLPRPDQVT 281
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 30/382 (7%)
Query: 41 LVDKPLEPPA---------LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLA 91
L+D L P A LV+L + +F ++ R V+ +F +S +
Sbjct: 107 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVV----SFNTMISGMC 162
Query: 92 GARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRT 149
A D E L H++ G ++ G + G I+ A F M C R
Sbjct: 163 RAGDLDGAETL--HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM----CGRG 216
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDIFSFNIVIKAFCEMGILDKAY 206
+K +L ++ K ++E+ + ++ D ++N ++ C L A
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 276
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
++VEM+ G++PD +TYTTLI + K+ ++ + MV +G + T+ I L
Sbjct: 277 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
RS A +++G M G+EPD TY +VI FCR G + ++ M + P
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 396
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
Y +++ C+ G A ++ + P T + LL+G CK + +
Sbjct: 397 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG------HCKHGKVTDI 450
Query: 387 VQRRVPHFSSNQLSAFKSILSK 408
+ + + L + SI+ +
Sbjct: 451 EELKSAKGTVPDLGVYTSIVGE 472
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM GC +V + N + L R L L ++P+ + + S+N ++ FC+
Sbjct: 338 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP-NSLSYNPLLHGFCQE 396
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY TL++A KD + + + N + KGC P L T+
Sbjct: 397 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITY 456
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ A +L+ M+R G++PD +TY+ +++G R G +D A K++ M G
Sbjct: 457 NTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEG 516
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ P+ Y ++ LC+ + A ++K P+ T + L+EG+
Sbjct: 517 LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K+G I A++ M + V + N L+ L +S LK L ++
Sbjct: 186 YCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR-ECYP 241
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I+A C + +A ++ EM+K G KPDV+TY LI+ K+ R +
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M GC PN+ T N+ ++ + + R A +L+ M R G P VT+N++I CR
Sbjct: 302 NNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRK 361
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A V M +PN Y ++H CQE + A + + + P + T
Sbjct: 362 RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421
Query: 365 SALLEGLKKNNQ 376
+ LL L K+ +
Sbjct: 422 NTLLTALCKDGK 433
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ +M YGCK V + N L+ + + + L ++ K +
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK-GCSPSV 348
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I C +L +A V+ +M K G P+ ++Y L+ F ++ + + +
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC+P++ T+N + L + A +++ + G P +TYN VI G + G
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ M + L P+ Y T++ L +EG + A + D + PS T +A
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNA 528
Query: 367 LLEGLKKNNQPCKANTIMA 385
++ GL K Q +A +A
Sbjct: 529 IMLGLCKAQQTSRAIDFLA 547
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 19/253 (7%)
Query: 147 KRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
K LN L+ V T + DL I + F+ F+ NI ++ G L++
Sbjct: 65 KSEASGLNGRLQQIVSTPNGDLNVIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEE 124
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
+ M G PDVI T+LI F + + + + ++ G P++ T+NV I
Sbjct: 125 GLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIG 184
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+S + +K + +++R + PD VTYN +++ C SG L A +V L R P
Sbjct: 185 GYC---KSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP 241
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK----------- 373
+ Y +I C + A + + KK P V T + L+ G+ K
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 374 NNQP---CKANTI 383
NN P CK N I
Sbjct: 302 NNMPSYGCKPNVI 314
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 3/206 (1%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFS 188
++ A+D M +GC S N L + + + +AI+ + V + DI +
Sbjct: 363 LLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP--DIVT 420
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N ++ A C+ G +D A ++ ++ G P +ITY T+I K + E L M
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P++ T++ ++ L + + +A K+ M+ I+P VTYN ++ G C++
Sbjct: 481 RKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 540
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIH 334
A + M+ + P Y +I
Sbjct: 541 RAIDFLAYMVEKGCKPTEATYTILIE 566
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ + GC + + N + LT+ + L E+ K ++ DI
Sbjct: 430 KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRK-GLKPDI 488
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +++ G +D+A + +M+ L +KP +TY ++ K +
Sbjct: 489 ITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 548
Query: 247 MVCKGCFPNLATFNVRIQHLVN 268
MV KGC P AT+ + I+ + +
Sbjct: 549 MVEKGCKPTEATYTILIEGIAD 570
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G A D M K V + + + L + A + E+ K I+ +
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSV 263
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +++ C+ G + L++ +M + P+VIT+ L+ F K+ + + N L+
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G PN+ T+N + + R +AN ++ LM R PD VT+ +IKG+C
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D KV+ + R L+ N Y ++ CQ G LA + ++ + +P V T
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +Q+
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQK 466
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A+ F +M G K +V + N+ ++ L ++ L ++ + I ++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNV 298
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ F + G L +A + EM G+ P++ITY TL+ + NR N + +L
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C P++ TF I+ +R K+ + + G+ + VTY+++++GFC+SG
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A++++ M+ ++P+ Y ++ LC G A + +D K + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 367 LLEGLKKNNQ-----------PCKA 380
++EG+ K + PCK
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKG 503
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I +I++ NI+I FC AY V+ ++ KLG +PD T+ TLI+ + +
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV 178
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV GC P++ T+N + + + A ++ M+ ++ D TY+ +I
Sbjct: 179 VLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSL 238
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M + + + Y +++ LC+ G +N ++ KD + + VP+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + LL+ K + +AN +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANEL 320
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 93/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +F +IK +C + +D V + K G+ + +TY+ L+ F + + ++ L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+ + + L + + +A ++ +Q+ ++ V Y +I+G C+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A ++ ++ + + PN Y MI LC++G + A I+ + + P+ T
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 365 SALL 368
+ L+
Sbjct: 547 NTLI 550
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N L V + L+ E+ + I +I ++N ++ +C L +A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M + PD++T+T+LI + R + G ++ + +G N T+++ +Q
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A +L M G+ PD +TY +++ G C +G L+ A +++ + ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I +C+ G A+ + K P+V T + ++ GL K +AN ++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ G L+KA + ++QK + ++ YTT+I K + E L+
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ CKG PN+ T+ V I L K +AN L+ M+ G P++ TYN +I+ R
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 305 GHLDMAKKVYSAM 317
G L + K+ M
Sbjct: 557 GDLTASAKLIEEM 569
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 7/213 (3%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD----KAYLVMVEMQKLGVKPDV 221
L I +FL F I + N+ + GI+D A + EM + P +
Sbjct: 32 LCTISSFLSSCERDFS---SITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGL 88
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ ++ SA + + + + G N+ T N+ I ++ A ++G
Sbjct: 89 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ + G EPD T+N +I G C G + A + M+ P+ Y ++++ +C+ GD
Sbjct: 149 VMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+LA+ M + ++N V T S +++ L ++
Sbjct: 209 TSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G IK A + F +M +G V + L L ++ L KA++ F E +K +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF--EDLQKSKMD 470
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I + +I+ C+ G ++ A+ + + GVKP+V+TYT +IS K N L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 244 WNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M G PN T+N I+ HL + + A KL+ M+ G D + +VI
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA-KLIEEMKSCGFSADASSIKMVIDML- 588
Query: 303 RSGHLD 308
SG LD
Sbjct: 589 LSGELD 594
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 271 RSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R+ Q N ++ ++ GI + T N++I FCR A V ++ P+
Sbjct: 100 RTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT 159
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+ T+I+ LC EG + A ++ ++ P + T ++++ G+ ++ A ++ +
Sbjct: 160 TFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM 219
Query: 388 QRR 390
+ R
Sbjct: 220 EER 222
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 11/298 (3%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYGC 146
R R+ I +LE+ ++P I +++ Y K+G I A+ M +
Sbjct: 154 RSGKTRKATRIMEILENSGAVPD-----VITYNVLIGGYCKSGEIDKALQVLERMSV--- 205
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
V + N L+ L +S LK L ++ D+ ++ I+I+A C + +A
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR-ECYPDVITYTILIEATCNDSGVGQAM 264
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
++ EM+K G KPDV+TY LI+ K+ R + N M GC PN+ T N+ ++ +
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ R A +L+ M R G P VT+N++I CR L A V M MPN
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y ++H CQE + A + + + P + T + LL L K+ + A I+
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM GC +V + N + L R L L ++P K + S+N ++ FC+
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP-KHGCMPNSLSYNPLLHGFCQE 397
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY TL++A KD + + + N + KGC P L T+
Sbjct: 398 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ A +L+ M+R G++PD +TY+ +++G G +D A K++ M G
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEG 517
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ P+ Y ++ LC+ + A ++K P+ T + L+EG+
Sbjct: 518 LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ +M LYGC+ V + N L+ + + + L ++ K +
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK-GCSPSV 349
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I C +L +A V+ +M K G P+ ++Y L+ F ++ + + +
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC+P++ T+N + L ++ A +++ + G P +TYN VI G + G
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ M + L P+ Y T++ L EG + A + D + PS T +A
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNA 529
Query: 367 LLEGLKKNNQPCKANTIMA 385
++ GL K Q +A +A
Sbjct: 530 IMLGLCKAQQTSRAIDFLA 548
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
F+ F+ NI ++ G L++ + M G PDVI T+LI F + +
Sbjct: 104 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATR 163
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ ++ G P++ T+NV I +S + +K + +++R + PD VTYN +++ C
Sbjct: 164 IMEILENSGAVPDVITYNVLIGGYC---KSGEIDKALQVLERMSVAPDVVTYNTILRSLC 220
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
SG L A +V + R P+ Y +I C + A + + KK P V
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280
Query: 363 TISALLEGLKK-----------NNQP---CKANTI 383
T + L+ G+ K NN P C+ N I
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVI 315
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ + GC + + N + LT+ + L E+ K ++ DI
Sbjct: 431 KDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK-GLKPDI 489
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +++ G +D+A + +M+ L +KP +TY ++ K +
Sbjct: 490 ITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAY 549
Query: 247 MVCKGCFPNLATFNVRIQHLVN 268
MV KGC P AT+ + I+ + +
Sbjct: 550 MVEKGCKPTKATYTILIEGIAD 571
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N ++ +C G +A + +M+ GV+P+V+TY++L++ K+ R ++
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 302
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P++AT+ +Q + R ++ KL LM R G++PD +TYN +I G C +
Sbjct: 303 DSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 362
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K+ ++M+ + P+ Y T+I+ C+ + A + K+ + P++ T
Sbjct: 363 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 422
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ +L+GL + A + + + +LS + IL
Sbjct: 423 NIILQGLFHTRRTAAAKELYVSITKSGTQL---ELSTYNIIL 461
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 2/210 (0%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E R +++ + F + V + ++ DI ++N +I C G +D+A ++ M +GVKPD+
Sbjct: 327 EGRVIESEKLFDLMV--RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY TLI+ + + +R + L+ MV G PN+ T+N+ +Q L + RR+ A +L
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 444
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ + G + + TYN+++ G C++ D A +++ + L + + MI L + G
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A + VP V T S + E L
Sbjct: 505 MDEAKDLFAAHSANGLVPDVRTYSLMAENL 534
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 11/248 (4%)
Query: 134 AMD-TFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQF-DIFSFN 190
AMD M GC V S N LK L E+R +A++ M ++ D+ S+N
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205
Query: 191 IVIKAFCEMGI--------LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
V+ F + GI +DKA V+ M K GV PD +TY +++ + +P+ G
Sbjct: 206 TVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 265
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M G PN+ T++ + +L RS +A K+ M + G+EPD TY +++G C
Sbjct: 266 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC 325
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + ++K++ M+ + P+ Y T+I C G + A + + P +
Sbjct: 326 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 385
Query: 363 TISALLEG 370
T L+ G
Sbjct: 386 TYGTLING 393
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ ++ +++ ++ C+ G +A + M K G++PD+ TY TL+ K+ R
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESE 334
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++LMV G P++ T+N I + +A KL+ M G++PD VTY +I G+
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR +D A ++ M+ + PN Y ++ L A + K +
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454
Query: 362 DTISALLEGLKKNN 375
T + +L GL KNN
Sbjct: 455 STYNIILHGLCKNN 468
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGLW 244
+ ++ I+I C G LD + + + K G + D IT+T L+ D R + + +
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM---QRFGIEPDEVTYNLVIKGF 301
M GC P++ ++N ++ L ++ RS +A +L+ +M + G PD V+YN V+ GF
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 302 CRSG--------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G +D A +V + M+ +MP+ Y +++H C G A K
Sbjct: 212 FKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 271
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T S+L+ L KN + +A I + +R
Sbjct: 272 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 308
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Query: 179 KFHIQFDIFSFNIVIKAFC-EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
K + D +F ++K C + D +V+ M +LG PDV +Y L+ +NR
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 238 EIGNGLWNLMV---CKGCFPNLATFNV--------RIQHLVNKRRSWQANKLMGLMQRFG 286
+ L ++M G P++ ++N IQ + + +A +++ M + G
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNG 239
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ PD +TYN ++ G+C SG A M + PN Y ++++YLC+ G A
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 299
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ K+ P + T LL+G K + ++ + L+ R
Sbjct: 300 KIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ DI ++ +I +C + +D A + EM GV P++ITY ++ + R
Sbjct: 380 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 439
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ + G L+T+N+ + L + +A ++ + ++ + T+N++I
Sbjct: 440 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 499
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G +D AK +++A L+P+ + Y M L ++G
Sbjct: 500 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 540
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + + A+ F +M G + + N L+ L +R A + + + K Q
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT-KSGTQL 452
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ C+ + D+A + + ++ + T+ +I A K R + L+
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 512
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
G P++ T+++ ++L+ + + + L M+ G D N +++ +
Sbjct: 513 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 572
Query: 305 GHLDMA 310
G + A
Sbjct: 573 GDITRA 578
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 3/298 (1%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
++++IE K + VSR D E +LE + + Q +M+ Y ++G ++
Sbjct: 26 HQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGT--QISDFYVFSGLMIAYLESGFVR 83
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ F + + + L+ L E R K + F EV E + ++ FNI+
Sbjct: 84 DAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGY-PASLYFFNIL 142
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
++ FC+ G + A V + K G++P V+++ TLI+ + K + G L + M G
Sbjct: 143 MQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGA 202
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ T+++ I L + + +AN+L M G+ P+ VT+ +I G C++ +D+A +
Sbjct: 203 QPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAME 262
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+Y ML + L P+ Y T+I+ LC++G+ + + + + P + + L++G
Sbjct: 263 IYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDG 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 3/277 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G ++ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
Q D+++++I+I C+ G LD+A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNE 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ ++ ++ M+ +G P+L T+N I L K Q + L+ M G++PD+++Y
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L++A ++ + M+ + + Y +I LC+EG A M ++ +
Sbjct: 316 TLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
P T + ++ K A+ ++ +QR P
Sbjct: 376 GLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGP 412
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 27/294 (9%)
Query: 8 RRFCHTA----AAAAADAIALNNIR--AVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
+RFC A + DAI +R VS N N +KL D +
Sbjct: 144 QRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLIN------------GYIKLG---DLD 188
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+ F+L K+ H + Y + ++ L + D L + L G +
Sbjct: 189 EGFRL-KSAMHASGAQPDVYTYSILINGLCKEGKLDEANELF--NEMLDNGLVPNGVTFT 245
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+++G K + AM+ + M G + + N + L + +LK + + E+
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D S+ +I C+ G L+ A + +M + ++ D + YT LIS ++ R
Sbjct: 306 -GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGD 364
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ M+ G P+ T+ + I KR S A+KL+ MQR G P VT
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 17/293 (5%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGC 146
RL R+ I +LE ++P I +M+ G KAG I +A+ M +
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPD-----VITYNVMISGYCKAGEINNALSVLDRMSV--- 200
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQFDIFSFNIVIKAFCEMGILD 203
V + N L+ L +S LK QA MEV ++ D+ ++ I+I+A C +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLK--QA--MEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ EM+ G PDV+TY L++ K+ R + N M GC PN+ T N+ +
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + + R A KL+ M R G P VT+N++I CR G L A + M
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
PN Y ++H C+E + A + + + P + T + +L L K+ +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ DM GC+ V + N L+ + + + L ++ K +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSV 344
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I C G+L +A ++ +M + G +P+ ++Y L+ F K+ + +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC+P++ T+N + L + A +++ + G P +TYN VI G ++G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A K+ M + L P+ Y +++ L +EG + A + + P+ T ++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 367 LLEGLKKNNQPCKA 380
++ GL K+ Q +A
Sbjct: 525 IMLGLCKSRQTDRA 538
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM G +V + N + L L L ++P+ Q + S+N ++ FC+
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKE 392
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY T+++A KD + E + N + KGC P L T+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ +A KL+ M+ ++PD +TY+ ++ G R G +D A K +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ PN + +++ LC+ + A + + P+ + + L+EGL
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +I+ FC +G KA ++ ++ G PDVITY +IS + K EI N L
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG--EINNAL- 192
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+++ P++ T+N ++ L + + QA +++ M + PD +TY ++I+ CR
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A K+ M R P+ Y +++ +C+EG + A D P+V T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ +L + + A ++A + R+
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRK 338
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L++ + + M G PD+I TTLI F + + + ++ G P++ T+
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
NV I ++ + N + ++ R + PD VTYN +++ C SG L A +V ML
Sbjct: 176 NVMISGYC---KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
R P+ Y +I C++ A + + + P V T + L+ G+ K +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+L+G K + A++ M GC + + N L L + ++ L ++ K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++N VI + G KA ++ EM+ +KPD ITY++L+ ++ + +
Sbjct: 445 CSPV-LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ G PN TFN + L R++ +A + M G +P+E +Y ++I+G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
G A ++ + + + LM Q
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ TL S + N GNG ++ + ++ + N ++ +V + K + M
Sbjct: 75 FETLSSGYSNSN----GNGHYSSVNSSFALEDVESNN-HLRQMVRTGELEEGFKFLENMV 129
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G PD + +I+GFCR G A K+ + G +P+ Y MI C+ G+ N
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 344 LA 345
A
Sbjct: 190 NA 191
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
F DM G ++V + N + + + D+ ++ ++ ++ + DI ++N +I +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQM-KQMGLTPDIVTYNSLIDGYG 298
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
++G+LD+++ + EM+ +G +PDVITY LI+ F K + + M G PN+
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T++ I L + QA K + M+R G+ P+E TY +I C++G+L A K+ M
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L ++ N Y T++ LC+EG A + + +K P++ T +AL+ G KN +
Sbjct: 419 LQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKR 477
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 126/310 (40%), Gaps = 54/310 (17%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YGK G++ + F +M GC+ V + NA + + + FL E+ ++
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS-GLKP 355
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD------------------------ 220
++ +++ +I A C+ +L +A +++M+++G+ P+
Sbjct: 356 NVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLA 415
Query: 221 -----------VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
V+TYTTL+ K+ R L+ M+ G PNL T+ + +
Sbjct: 416 DEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKN 475
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+R A +L+ ++ I+PD + Y +I G C L+ + V S M + N IY
Sbjct: 476 KRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIY 535
Query: 330 QTMIHYLCQEGD----FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+ + G NL MC ++ V T L++GL K
Sbjct: 536 TIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV----TFCVLIDGLCKK----------G 581
Query: 386 LVQRRVPHFS 395
LV+ + +F+
Sbjct: 582 LVEEAIDYFA 591
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+ + F E+G+L++A M + V P + + K + ++ N + MV
Sbjct: 185 FDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMV 244
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G ++ T+N+ I ++ + A L M++ G+ PD VTYN +I G+ + G LD
Sbjct: 245 GAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLD 304
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ ++ M P+ Y +I+ C+ A+ + P+V T S L+
Sbjct: 305 ESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLI 364
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
+ L K + +A I L+ R S N+ +
Sbjct: 365 DALCKEHMLQQA--IKFLLDMRRVGLSPNEFT 394
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +I C L++ VM EM+ G++ + + YT + A++K + L
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLL 555
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY-NLVIKGFCR 303
M G + TF V I L K +A M F ++P+ V +I G C+
Sbjct: 556 QEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ +++ AKK++ M + ++P++ Y +I + DF A
Sbjct: 616 NNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEA 657
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PD++ Y T+I N+ E + + M G N + +R+ ++ +A L
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR-KIYQTMIHYLC 337
+ M G+E VT+ ++I G C+ G ++ A ++ M L PN + +I LC
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC 614
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ A + + KN VP +AL++G
Sbjct: 615 KNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P F+ + +A + M RF + P + N + ++G D++
Sbjct: 178 CVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSN 237
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K + M+G + + Y MI Y+C+EGD A + + P + T ++L++G
Sbjct: 238 KFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGY 297
Query: 372 KK 373
K
Sbjct: 298 GK 299
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD-VITYTTLISAFYKDNRPEIG 240
++ I +F ++I C+ G++++A M ++P+ V T LI K+N E
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ M K P+ + I + + +A + M G+E D Y ++ G
Sbjct: 623 KKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWG 682
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ + A+ + M+G+ ++P+
Sbjct: 683 LSQGNLVQQARMFLNEMIGKGIVPDE 708
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + L S F + E ++ M FP + N + L + +NK
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M GI TYN++I C+ G + AK ++ M L P+ Y ++I +
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
G + ++ + ++ P V T +AL+ K Q KA
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKA 341
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG+ + ++ F M G +V + N+ L +L + E+ + +
Sbjct: 148 YGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTP 207
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG------------------VKPDVITYTT 226
D ++FN +I FC+ ++D+A+ + +M+ G V P+V++YTT
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 267
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLMQRF 285
L+ + + +++ M+ +G PN T+N I+ L R + + L+G F
Sbjct: 268 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 327
Query: 286 G-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
PD T+N++IK C +GHLD A KV+ ML +L P+ Y +I LC +F+
Sbjct: 328 TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDR 387
Query: 345 AYIMCKDSMKKNWVPSVDTISAL 367
A + + +K + D L
Sbjct: 388 AETLFNELFEKEVLLGKDECKPL 410
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH-IQFDIFSF 189
I A+ F+DM G K + N +K L+E+ I+ L+ + F D +F
Sbjct: 278 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 337
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN---- 245
NI+IKA C+ G LD A V EM + + PD +Y+ LI N + L+N
Sbjct: 338 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 397
Query: 246 ---LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ C P A +N ++L ++ QA K+ + + G++ D +Y +I G C
Sbjct: 398 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHC 456
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G A ++ ML R +P+ + Y+ +I L + G+ LA+ + ++ +++P
Sbjct: 457 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 516
Query: 363 TISALLEGLKK 373
T ++L L K
Sbjct: 517 TFHSVLAELAK 527
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 104/191 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI+ FC+ G + A V + K G++P V++Y TL++ + + + G L +
Sbjct: 142 LYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKS 201
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 202 AMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L+P+ Y T+I+ LC++GD N A+ + + K P T +
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYT 321
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 322 TLIDGCCKEGD 332
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M GV PDV TY
Sbjct: 157 DIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTY 215
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN TF I R A ++ M
Sbjct: 216 SVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L+ A + M + L P++ Y T+I C+EGD +
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDT 335
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A +M
Sbjct: 336 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMM 375
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K G I+ A F + +G + +V S N + DL + F L +
Sbjct: 152 FCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFKLKSAMHASGVX 209
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+ R ++ +
Sbjct: 210 PDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ + P+L T+N I L K QA+ L+ M G++PD++TY +I G C+
Sbjct: 270 YKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCK 329
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD A + M+ + + Y +I LCQEG A M ++ + P T
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGT 389
Query: 364 ISALLEGLKKNNQPCKANTIMALVQ 388
+ ++ + K K + ++ +Q
Sbjct: 390 YTMIINEVCKKGDVGKGSKLLKEMQ 414
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D ++ F+L K+ H V + Y + ++ L + D L + L +G +
Sbjct: 192 DLDEGFKL-KSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEM--LVKGLVPNGV 248
Query: 119 MRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
++ G K G + AM+ + M + + N + L + DL + E+
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
K ++ D ++ +I C+ G LD A+ M + ++ D + YT LIS ++ R
Sbjct: 309 SMK-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ M+ G P+ T+ + I + K + +KL+ MQ G P VTYN+
Sbjct: 368 SVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNV 427
Query: 297 VIKG 300
++ G
Sbjct: 428 LMNG 431
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 17/293 (5%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGC 146
R+ R+ I +LE ++P I +M+ G KAG I +A+ M +
Sbjct: 149 RMGKTRKAAKILEVLEGSGAVPD-----VITYNVMISGYCKAGEINNALSVLDRMSV--- 200
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQFDIFSFNIVIKAFCEMGILD 203
V + N L+ L +S LK QA MEV ++ D+ ++ I+I+A C +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLK--QA--MEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A ++ EM+ G PDV+TY L++ K+ R + N M GC PN+ T N+ +
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + + R A KL+ M R G P VT+N++I CR G L A + M
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
PN Y ++H C+E + A + + + P + T + +L L K+ +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ DM GC+ V + N L+ + + + L ++ K +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSV 344
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I C G+L +A ++ +M K G +P+ ++Y L+ F K+ + +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC+P++ T+N + L + A +++ + G P +TYN VI G ++G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A K+ M + L P+ Y +++ L +EG + A + + P+ T ++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524
Query: 367 LLEGLKKNNQPCKA 380
++ GL K Q +A
Sbjct: 525 IMLGLCKTRQTDRA 538
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM G +V + N + L L L ++P K Q + S+N ++ FC+
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-KHGCQPNSLSYNPLLHGFCKE 392
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY T+++A KD + E + N + KGC P L T+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ +A KL+ M+ ++PD +TY+ ++ G R G +D A K +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ PN + +++ LC+ + A + + P+ + + L+EGL
Sbjct: 513 MGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGL 564
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +I+ FC MG KA ++ ++ G PDVITY +IS + K EI N L
Sbjct: 136 DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAG--EINNAL- 192
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+++ P++ T+N ++ L + + QA +++ M + PD +TY ++I+ CR
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A K+ M R P+ Y +++ +C+EG + A D P+V T
Sbjct: 253 SGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ +L + + A ++A + R+
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRK 338
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
++ G L++ + + M G PD+I TTLI F + + + ++ G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ T+NV I ++ + N + ++ R + PD VTYN +++ C SG L A +
Sbjct: 169 VPDVITYNVMISGYC---KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V ML R P+ Y +I C++ A + + + P V T + L+ G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 373 KNNQ 376
K +
Sbjct: 286 KEGR 289
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+L+G K + A++ M GC + + N L L + ++ L ++ K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++N VI + G KA ++ EM+ +KPD ITY++L+ ++ + +
Sbjct: 445 CSPV-LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ G PN TFN + L R++ +A + M G +P E +Y ++I+G
Sbjct: 504 IKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563
Query: 301 FCRSGHLDMAKKVYSAMLGRRLM 323
G A ++ + + + LM
Sbjct: 564 LAYEGMAKEALELLNELCNKGLM 586
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A++ + GC + + N + L ++ L E+ K ++ D
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DLKPDT 484
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ G +D+A E +++GV+P+ +T+ +++ K + +
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM------GLMQRFGIE 288
M+ +GC P ++ + I+ L + + +A +L+ GLM+R E
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAE 592
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N ++ LV + K + M G PD + +I+GFCR G A K+ + G
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLA 345
+P+ Y MI C+ G+ N A
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNA 191
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 103/189 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++NI+++A C G +A V+ +M+ G P+ +TY TL++AF + + L
Sbjct: 156 NVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV 215
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++M G PNL TFN + + R A K+ M + G+ PD V+YN ++ G+C+
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKV 275
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A V++ M + +MP+ + ++IH +C+ G+ A + ++ ++ + T
Sbjct: 276 GCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITF 335
Query: 365 SALLEGLKK 373
+AL++G K
Sbjct: 336 TALIDGFCK 344
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A+ F +M G V + + + V+ ++ +L+ + E+ E+ +Q
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER-GLQM 330
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +F +I FC+ G LD A L + EM++ ++P V+ Y LI+ + R + L
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P++ T++ + + A +L M G+ PD +TY+ +I+ C
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M+ L P+ Y ++I C+EG+ A + + +K +P V T
Sbjct: 451 KRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTY 510
Query: 365 SALLEGLKKNNQPCKANTIM 384
S L+ GL K+ + +A ++
Sbjct: 511 SVLINGLSKSARTKEAQRLL 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A + +M G K V + + L ++ D + ++ E +
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN-GVLP 435
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ CE L A+++ M LG++PD +TYT+LI K+ E L
Sbjct: 436 DAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLH 495
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV------- 297
+ MV G P++ T++V I L R+ +A +L+ + P + Y+ +
Sbjct: 496 DEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNA 555
Query: 298 --------IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+KGFC G ++ A KVY ++L R + +Y +IH C+EG+ A
Sbjct: 556 ELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFH 615
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K ++ + P+ + +L+ GL + +A+ ++
Sbjct: 616 KQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVI 650
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+N ++ +C++G +A V EM + G+ PDV+T+T+LI K E GL
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL--MQRFGIEPDEVTYNLVIKGFC 302
M +G N TF I K + + L+ + M++ I+P V YN +I G+C
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKK--GFLDDALLAVREMRQCRIQPSVVCYNALINGYC 378
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G +D A+++ M + + P+ Y T++ C+ GD + A+ + + ++ +P
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAI 438
Query: 363 TISALL 368
T S+L+
Sbjct: 439 TYSSLI 444
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 96/183 (52%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ AFC G +D+A ++ M++ G+KP+++T+ ++++ K R E +++ M
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +G P+ ++N + S +A + M R GI PD VT+ +I C++G+L
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A + M R L N + +I C++G + A + ++ + PSV +AL
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373
Query: 368 LEG 370
+ G
Sbjct: 374 ING 376
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G P V+ Y ++ A + P ++ M+ G PN+ T+N+ ++ L + +A
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ M+ G +P+ VTYN ++ FCR+G +D A+++ M L PN + ++++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+C+ G A + + +K+ P + + L+ G K +A ++ A + R+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK 291
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M+ + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G+ PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K + D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK-GLXPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
K+ + L+A + F E+ E F + D F + I+I +C++G ++KA+ + EM K G+
Sbjct: 365 KLCKDGNMLEASKTF-QEMSE-FGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGI 422
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P V TYT LI+A K + L M+ +G P++ TFN I K +A +
Sbjct: 423 TPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFE 482
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L+ +M+ G+ PD VTYN +I G+ + AK + ++ R L P+ + +I
Sbjct: 483 LLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFS 542
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++G+F A+++ +++ P V T SALL G + + +AN +
Sbjct: 543 KKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANAL 588
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I A +M +G +V + + +S D+ A+ +L++ +
Sbjct: 401 YCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDM-AMAEYLLQRMMLEGLIP 459
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +FN +I F + G L KA+ ++ M+ G+ PD +TY LI + P +
Sbjct: 460 DVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDIL 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++ +G P++ TF I K +A + M ++PD VT + ++ G+CR+
Sbjct: 520 HELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRA 579
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ML L P+ +Y +IH C G+ N A + + ++P++ T
Sbjct: 580 RRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTH 639
Query: 365 SALLEGLKK 373
A G +K
Sbjct: 640 RAFALGFEK 648
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 33/290 (11%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ +++ L ++ N+ LK L S L + ++E + F + + +
Sbjct: 200 VSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLD-LAWDILEGMQSFGMHLNASILS 258
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV-- 248
+ I+++C G + + +++EM+ G+K DVI YT +I A K + ++ L M+
Sbjct: 259 LFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHC 318
Query: 249 ----------------CK--------------GCFPNLATFNVRIQHLVNKRRSWQANKL 278
CK PN+ ++ + L +A+K
Sbjct: 319 GISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKT 378
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M FG+ PD Y ++I G+C+ G ++ A + ML + P+ Y +I+ C+
Sbjct: 379 FQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCK 438
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
GD +A + + M + +P V T + L++G K KA ++ +++
Sbjct: 439 SGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMR 488
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA L L + L+ + L E+ E + D FS+N V+ CE G ++A ++ +M
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+ PDV+TY +L+ F K ++ + L MV + C P + T+ I R
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A ++M M + GI PD VTYN ++ G C++G L+ A ++ M+ + P+ Y ++
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ LC+ G + A ++ + +++ P++ T + +++G K + + + ++ L++
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ +I F L AY VM +M K G+ PD++TY L+ K + E + L
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+MV K C P++ T+++ + L + A L+ +M G +P+ VT+N +I GFC++G
Sbjct: 362 VMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAG 421
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D KV M P+ Y T+I C+ A+ + S P + S
Sbjct: 422 KVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGIS------PDKASYS 475
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR-VPHFSSN 397
++LEGL + +A +M L+ ++ P SS+
Sbjct: 476 SMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH 508
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME K I D+ ++N ++ C+ G L++A+ ++ M + PDV+TY+ L++
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K + + L +M+ +GC PNL TFN I + + +K++ LM+ PD V
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+ +I G+C++ + A A+LG + P++ Y +M+ LC G A + D
Sbjct: 444 TYSTLIDGYCKANRMQDA----FAILG--ISPDKASYSSMLEGLCSTGKVEEAQEV-MDL 496
Query: 353 MKKNWVPSVDTISALLEG 370
M K P + AL+ G
Sbjct: 497 MTKQGCPPTSSHYALIIG 514
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ I+I C+ +D+AY ++ EM + PD Y LI+ K + + + +
Sbjct: 93 FTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKM 152
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + C P++ T+ I +A KLM M+ G+ PD V YN ++ G C+
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ K+ M+ P+ Y T++ LC+ G + A + + ++K P V T ++
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS 272
Query: 367 LLEGLKKNNQPCKANTIMA-LVQRRV 391
L++G K ++ +A ++ +V RR
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRC 298
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +N +I C+MG +D A V+ M + PDVITYT+LI + N + L
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+ +N + L + + + +KL+ M G EPD +YN V+ C S
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A K+ M+ ++ P+ Y +++ C+ + A + +D + + P+V T
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L+ G + ++ A +M
Sbjct: 306 TTLIGGFSRADRLADAYRVM 325
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 29/248 (11%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L+E+ + Q ++ +FN +I FC+ G +D+ + V+ M+++ PDV+TY+TLI +
Sbjct: 393 LLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGY 452
Query: 232 YKDNR-----------------------------PEIGNGLWNLMVCKGCFPNLATFNVR 262
K NR E + +LM +GC P + + +
Sbjct: 453 CKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALI 512
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + R +A K++ +M G EP+ TY+++I G C++ ++ A V ML +
Sbjct: 513 IGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGC 572
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
+P+ Y ++I C+ + AY K P + L+ G ++ KA
Sbjct: 573 VPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIE 632
Query: 383 IMALVQRR 390
+M L+ +
Sbjct: 633 VMQLMLEK 640
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++I C++ D+A ++ M + G +P++ TY+ LI+ K R E + ++M+
Sbjct: 509 YALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVML 568
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KGC P++AT+ I + A + M+ G EPD++ YN++I GFC+SG+++
Sbjct: 569 EKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVE 628
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A +V ML + P+ Y +++ L E
Sbjct: 629 KAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I D S++ +++ C G +++A VM M K G P Y +I R +
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ +M +GC PNL T+++ I L +R A ++ +M G PD TY +I
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC+ +D A + + M P++ Y +I CQ G+ A + + ++K P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644
Query: 360 SVDTISALLEGL 371
T +L+ L
Sbjct: 645 DAATYFSLMRSL 656
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I F G + EM PDVIT+ T++ A+ +IG+ L
Sbjct: 26 TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC-----QIGDLDRALS 80
Query: 248 VCKG---CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+G C P T+ + I L +R +A +L+ M + PD YN +I G C+
Sbjct: 81 HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A+ V ML R +P+ Y ++I CQ + A + + + P
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 365 SALLEGLKKNNQ 376
+ALL GL K NQ
Sbjct: 201 NALLNGLCKQNQ 212
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEK 179
ML G G ++ A + M GC T + L + R +A++ +++V +
Sbjct: 477 MLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALK--MLQVMSE 534
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ ++++++I+I C+ ++ A V+ M + G PDV TYT+LI F K N+ +
Sbjct: 535 RGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDA 594
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ M GC P+ +N+ I +A ++M LM G PD TY
Sbjct: 595 AYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L +RF PD +T+N ++K +C+ G LD A + + P Y +IH LCQ
Sbjct: 51 LARRF--SPDVITHNTILKAYCQIGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQ 106
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ AY + + ++K+ P + L+ GL K + A ++ ++ R
Sbjct: 107 RIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER 156
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+P TY +I GF R+G+ M ++ + ML RR P+ + T++ CQ GD + A
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 348 MCKDSMKKNWV-PSVDTISALLEGL 371
+ M W P+ T L+ GL
Sbjct: 81 HFRGKM---WCSPTAFTYCILIHGL 102
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFD 185
K+ + +A+D M G V + N+ + L S R A + ++ K I D
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR--MVSCMTKREIYPD 255
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+FN +I A + G + +A EM + + PD++TY+ LI +R + ++
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV KGCFP++ T+++ I ++ KL M + G+ + VTY ++I+G+CR+G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L++A++++ M+ + PN Y ++H LC G A ++ D K + T +
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 366 ALLEGLKKNNQPCKANTI 383
++ G+ K + A I
Sbjct: 436 IIIRGMCKAGEVADAWDI 453
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA--IQAFLMEVPEKFHIQFDIFS 188
+ ++D F+ H+ C R + S+ ++L+ +K + +L E + I ++ +
Sbjct: 62 LDDSLDLFF--HMVQC-RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT 118
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
NI++ FC L A + +M KLG +P ++T+ +L++ F + +R +++ MV
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N I L ++ A L+ M++ GI PD VTYN +I G C SG
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ S M R + P+ + +I +EG + A ++ ++++ P + T S L+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 369 EGL 371
GL
Sbjct: 299 YGL 301
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 89/156 (57%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++I+I +C+ ++ + EM + GV + +TYT LI + + + + ++
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+NV + L + + +A ++ MQ+ G++ D VTYN++I+G C++
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + A +Y ++ + LMP+ Y TM+ L ++G
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 35/240 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N +I C+ +D A ++ M+K G+ PDV+TY +LIS R +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNK--------------RRSW----------------- 273
+ M + +P++ TFN I V + RRS
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 274 ----QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A ++ G M G PD VTY+++I G+C+S ++ K++ M R ++ N Y
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I C+ G N+A + + + P++ T + LL GL N + KA I+A +Q+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + G + + N L L +FL ++ + H + I +F ++ FC
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGD 165
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + +M +G KP+V+ Y T+I K + + L N M G P++ T+N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L + R A +++ M + I PD T+N +I + G + A++ Y M+ R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L P+ Y +I+ LC + A M + K P V T S L+ G K+ +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ ++ T L++ F + ++ +
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ TF + R + A + M G +P+ V YN +I G C+S
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A + + M + P+ Y ++I LC G ++ A M K+ P V T +
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
AL++ K + +A + RR
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRR 285
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD + + M + P + ++ L+SA K + ++ LW M G NL T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ + A +G M + G EP VT+ ++ GFCR + A ++ M+G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
PN IY T+I LC+ + A + K P V T ++L+ GL + + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 382 TIMALVQRR 390
+++ + +R
Sbjct: 242 RMVSCMTKR 250
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG + A + F M G + + N L L ++ ++ L ++ +K +
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM-QKNGMDA 429
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++NI+I+ C+ G + A+ + + G+ PD+ TYTT++ YK + L+
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 245 NLMVCKGCFPN 255
M G PN
Sbjct: 490 RKMKEDGILPN 500
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 30/382 (7%)
Query: 41 LVDKPLEPPA---------LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLA 91
L+D L P A LV+L + +F ++ R V+ +F +S +
Sbjct: 231 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVV----SFNTMISGMC 286
Query: 92 GARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRT 149
A D E L H++ G ++ G + G I+ A F M C R
Sbjct: 287 RAGDLDGAETL--HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM----CGRG 340
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDIFSFNIVIKAFCEMGILDKAY 206
+K +L ++ K ++E+ + ++ D ++N ++ C L A
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 400
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
++VEM+ G++PD +TYTTLI + K+ ++ + MV +G + T+ I L
Sbjct: 401 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
RS A +++G M G+EPD TY +VI FCR G + ++ M + P
Sbjct: 461 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 520
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
Y +++ C+ G A ++ + P T + LL+G CK + +
Sbjct: 521 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG------HCKHGKVTDI 574
Query: 387 VQRRVPHFSSNQLSAFKSILSK 408
+ + + L + SI+ +
Sbjct: 575 EELKSAKGTVPDLGVYTSIVGE 596
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ L + G +K A M G V S + + + L + LME ++
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLK-LMEELQRK 316
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ + +++N +I C+ G + +A V+ M+ + PD + YTTLIS F K +
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ M K P+ T+ I L + +A KL M G++PDEVTY +I G
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G + A +++ M+ + L PN Y ++ LC+ G+ ++A + + +K P+
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQ 388
V T +AL+ GL CK I V+
Sbjct: 497 VCTYNALINGL------CKVGNIEQAVK 518
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG++ A F + YG +V S N L L+ S D + + + ++
Sbjct: 193 EAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNT 252
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+NI++ C++G + +A+ ++++M+ G PDV++Y+ ++ + + + L
Sbjct: 253 VSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEE 312
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG PN T+N I L R +A +++ +M+ I PD V Y +I GF +SG+
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + K++ M ++++P+ Y +MIH LCQ G A + + + K P T +A
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432
Query: 367 LLEGLKKNNQ 376
L++G K +
Sbjct: 433 LIDGYCKAGE 442
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A M G V + A + L + ++ L E+ EK +Q
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK-GLQP 495
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I C++G +++A +M EM G PD ITYTT++ A+ K + L
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M+ KG P + TFNV + +L+ M GI P+ T+N ++K +C
Sbjct: 556 RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIR 615
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ ++Y M + ++P+ Y +I C+ + A+ + K+ ++K + + +
Sbjct: 616 NNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASY 675
Query: 365 SALLEGLKK 373
++L++G K
Sbjct: 676 NSLIKGFYK 684
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 13/313 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLL---EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
N+Y + +S L R E +L ++Q+ P ++ +GK+G +
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV---VYTTLISGFGKSGNVSVEY 377
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
F +M + + + L ++ + + E+ K ++ D ++ +I
Sbjct: 378 KLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK-GLKPDEVTYTALIDG 436
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+C+ G + +A+ + +M + G+ P+V+TYT L+ K +I N L + M KG PN
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T+N I L QA KLM M G PD +TY ++ +C+ G + A ++
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
ML + L P + +++ C G + K + K +P+ T ++L++
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK------ 610
Query: 376 QPCKANTIMALVQ 388
Q C N + A ++
Sbjct: 611 QYCIRNNMRATIE 623
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 127/293 (43%), Gaps = 56/293 (19%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI----QFDIFS---------------- 188
+++SL +++ S+DL+ + E EK H+ FD F+
Sbjct: 124 SLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLV 183
Query: 189 FNIVIKAFCEMGIL-------DK-----------------------------AYLVMVEM 212
F++ + E G+L DK A+ V E
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY 243
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
++GV + ++Y ++ + + + + L M +G P++ +++V + +
Sbjct: 244 SEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQL 303
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ KLM +QR G++P++ TYN +I C++G + A++V M +R+ P+ +Y T+
Sbjct: 304 GKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
I + G+ ++ Y + + +K VP T ++++ GL + + +A + +
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 105 HQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
H + + +G + ++ G K G + A + ++M G + V + NA + L +
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCK 509
Query: 163 SRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
+++ QA LME + D ++ ++ A+C+MG + KA+ ++ M G++P +
Sbjct: 510 VGNIE--QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTI 567
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+T+ L++ F E G L M+ KG PN TFN ++ + ++
Sbjct: 568 VTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKG 627
Query: 282 MQRFGIEPDEVTYNLVI-----------------------------------KGFCRSGH 306
M G+ PD TYN++I KGF +
Sbjct: 628 MHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+ A+K++ M + ++IY + +EG++ +C ++++K
Sbjct: 688 FEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A M G V + A L + D++A L E+ K ++
Sbjct: 444 YCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK-GLEL 502
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I C+ G LD+A M +M G+KPDV TYTTLI A K + + L
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P + T+NV + R KL+ M I P+ TYN ++K +C
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ ++Y M R + PN Y +I C+ A + ++K + + +
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682
Query: 365 SALLEGLKK 373
SAL+ L K
Sbjct: 683 SALIRLLNK 691
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 4/237 (1%)
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ V S N LKVL + ++ + E+ D+ ++ I+I +C +G L+ A
Sbjct: 260 KNVCSYNILLKVLCGAGRVEDARQLFDEMASPP----DVVTYGILIHGYCALGELENAVK 315
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ +M GV+P+ YT++++ R + MV + A + +
Sbjct: 316 LLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFC 375
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
NK A + MQR G+ D VTY +I G CR+G L A+KV ML RRL +
Sbjct: 376 NKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV 435
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y ++ C+ G A+ + +++ P+V T +AL +GL K AN ++
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G L +A V+ EM + D +TYT L+ + K + +
Sbjct: 398 DGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVH 457
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV +G PN+ T+ L + AN+L+ M G+E + TYN +I G C++
Sbjct: 458 NTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKA 517
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+LD A + + M L P+ Y T+I LC+ G+ + A+ + ++ + P++ T
Sbjct: 518 GYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTY 577
Query: 365 SALLEGL 371
+ L+ G
Sbjct: 578 NVLMNGF 584
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 11/290 (3%)
Query: 99 IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK 158
+E ++ H+ L E ++ + G + A F +M G + +
Sbjct: 352 VEDMVHHKVIL----DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLIN 407
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
L + +LK + L E+ + + D ++ +++ +C+ G + +A+ V M + GV
Sbjct: 408 GLCRAGELKEAEKVLQEMLAR-RLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA 466
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P+V+TYT L K + N L + M KG N T+N I L QA +
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRT 526
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M M G++PD TY +I C+SG LD A + ML + P Y +++ C
Sbjct: 527 MADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCM 586
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
G + + ++KN P+ T ++L++ Q C N + + +
Sbjct: 587 SGRVEGGKKLLEWMLEKNIHPNATTYNSLMK------QYCIGNNMKSTTE 630
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + ++M G + + N+ + L ++ L + ++ + ++ D+
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM-DAAGLKPDV 539
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I A C+ G LD+A+ ++ EM G+KP ++TY L++ F R E G L
Sbjct: 540 YTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEW 599
Query: 247 MVCKGCFPNLATFNVRI-QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ K PN T+N + Q+ + G+ R +EP+E TYN++IKG C++
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSR-NVEPNENTYNILIKGHCKAR 658
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ A+ ++ M+ + Y +I L ++ F A + D K+ + D
Sbjct: 659 SMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPD 715
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 8/297 (2%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
L GA R + L + S P G ++ Y G +++A+ DM G +
Sbjct: 272 LCGAGRVEDARQLFDEMASPPDVVTYGILIHG---YCALGELENAVKLLDDMVARGVEPN 328
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIKAFCEMGILDKAYL 207
+ + +L D + L V + H + D + V+ FC G L A
Sbjct: 329 ATVYTSVVALLC---DKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR 385
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
EMQ+ G+ D +TYTTLI+ + + + M+ + + T+ V +
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ + +A ++ M + G+ P+ VTY + G C+ G + A ++ M + L N
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y ++I+ LC+ G + A D P V T + L++ L K+ + +A+ ++
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + AM T DM G K V + + L +S +L L E+ + I+ I
Sbjct: 516 KAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN-GIKPTI 574
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ FC G ++ ++ M + + P+ TY +L+ + N + ++
Sbjct: 575 VTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKG 634
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + PN T+N+ I+ R +A M G +Y+ +I+ +
Sbjct: 635 MCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKK 694
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A+K++ M +Y I + E + +C + ++ + V S
Sbjct: 695 FVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIVKS 748
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
+++ G+ P ++S D E+ GL + VC ++N+ ++ L R
Sbjct: 226 VRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVC--------SYNILLKVLCGAGR 277
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A +L M PD VTY ++I G+C G L+ A K+ M+ R + PN +Y +
Sbjct: 278 VEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTS 334
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ LC +G + A + +D + + + +L G
Sbjct: 335 VVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++ TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L ++M+ G P++ T++V I L + + AN+ M G+ P+ VT+ +I G
Sbjct: 197 FRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+AK++Y ML + L+P+ Y T+I+ LC++GD A+ + D K P
Sbjct: 257 HCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KITYTTLIBGCCKEGD 332
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
V +Q D+++++++I C+ +D A EM G+ P+ +T+TTLI K+
Sbjct: 202 VMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 262 RVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + +Y +I LCQEG A M ++ +
Sbjct: 322 TLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 RLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
+ N + L + DLK + ++ K ++ D ++ +I C+ G LD A+
Sbjct: 284 TYNTLIYGLCKKGDLKQAHDLIDDMSMK-GLKPDKITYTTLIBGCCKEGDLDSAFEHRKR 342
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + ++ D + YT LIS ++ R + M+ P+ T+ + I K
Sbjct: 343 MIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGD 402
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
W+ +KL+ MQR G P VTYN+++ G
Sbjct: 403 VWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 168/372 (45%), Gaps = 41/372 (11%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEH 101
KP+ P L L + + DP+ QLF+ N + +++ +++L +R F +E
Sbjct: 5 KPISPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEMEQ 64
Query: 102 LLEH-QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
+L ++ +E ++ YG+A + A+ TF + + C+RTVKSLN+ L L
Sbjct: 65 ILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNAL 124
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ ++ + L + +KF D+ ++N++I A C G L A+ V EM + V P+
Sbjct: 125 LKCKEFEKFDGILSGI-DKFATP-DVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPN 182
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMV-CKGCFPNLATFNVRIQHL--VNK-------R 270
V+T+ TLIS D+R + L MV PN + ++ L VN+ +
Sbjct: 183 VVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELK 242
Query: 271 RSWQANKL--------------------------MGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ANKL + M+ G +PD VTYN +I GFC
Sbjct: 243 KEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNE 302
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A V M+ + P+ Y +I LC+EG + A + +D ++ P V +
Sbjct: 303 KDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSY 362
Query: 365 SALLEGLKKNNQ 376
L +GL + Q
Sbjct: 363 RILFDGLCEGMQ 374
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D ++ +I A ++G D+ ++V+ EM++ G KPD +TY +IS F + E
Sbjct: 250 LRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAY 309
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
G+ MV KGC P++ ++NV I L + + +AN L M R G PD +Y ++ G
Sbjct: 310 GVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGL 369
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
C + A + M+ + P + LCQEG+ L +CK
Sbjct: 370 CEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLEL---LCK 415
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F+++ + F + ++K C + L A+ + EM ++ D Y+TLI+A +K R +
Sbjct: 213 FNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDE 272
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ M GC P+ T+N I N++ A ++ M G +PD ++YN++I
Sbjct: 273 VFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIIS 332
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C+ G A ++ M R P+ Y+ + LC+ FN A + + + K + P
Sbjct: 333 GLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAP 392
Query: 360 SVDTISALLEGL 371
+ + +E L
Sbjct: 393 KSASKTKFVEAL 404
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I FC + AY V+ EM G KPDVI+Y +IS K+ + N L+
Sbjct: 288 DTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLF 347
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC P++ ++ + L + +A ++ M G P + ++ C+
Sbjct: 348 EDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQE 407
Query: 305 GHLDMAKKVYSAML 318
G+L++ KV ++++
Sbjct: 408 GNLELLCKVLNSLV 421
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A++ ++ +GCK + LK L S K ++ L E+ + D +
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN-NCAPDEVT 393
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN ++ + C+ G++D+A V+ M + G D++TY++++ R + L + +
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK 453
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P+ + ++ L + + +A +LM M PDEVT+N V+ C+ G +D
Sbjct: 454 SYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVD 513
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V M P+ Y +I LC E + A + D P + T + LL
Sbjct: 514 RAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLL 573
Query: 369 EGLKKNNQPCKANTIMALVQR 389
+GL ++ A +MA + R
Sbjct: 574 KGLCGVDRWEDAEQLMANMMR 594
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 3/296 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ + + L G+ R+ +E LL S E I+ + G++ A++
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVV 414
Query: 139 YDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
M +GC + + ++ L L + R A++ L+ + + + D ++ V+K C
Sbjct: 415 DHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE--LLSRLKSYGCKPDTIAYTTVLKGLC 472
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
++A +M EM PD +T+ T++++ + + + M GC P++
Sbjct: 473 STEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N I L N+ A +L+ +Q G +PD VT+N ++KG C + A+++ + M
Sbjct: 533 TYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM 592
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ P+ + T+I LCQ+G A K + VP+ T S +++ L K
Sbjct: 593 MRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLK 648
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN +I+A C G + A V +M G P V+TY+ L+ A K++ L
Sbjct: 250 DTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALL 309
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KGC P++ T+NV I + N+ +A ++ + G +PD VTY V+K C S
Sbjct: 310 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+++ + M P+ + T++ LCQ+G + A + + V + T
Sbjct: 370 ERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTY 429
Query: 365 SALLEGL 371
S++L+GL
Sbjct: 430 SSILDGL 436
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A+ F DM GC +V + + L + + A L E+ K + DI +
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK-GCEPDIVT 323
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N++I A C G +D+A ++ + G KPD +TYT ++ + R + L M
Sbjct: 324 YNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMT 383
Query: 249 CKGCFPNLATFNVRI-----QHLVNKR------------------------------RSW 273
C P+ TFN + Q LV++ R
Sbjct: 384 SNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVD 443
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A +L+ ++ +G +PD + Y V+KG C + + A+++ + ML P+ + T++
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVV 503
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LCQ+G + A + + + P + T + +++GL
Sbjct: 504 ASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 128/331 (38%), Gaps = 44/331 (13%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + ++H+ EH G + +L G G + A++ + YGCK
Sbjct: 409 RAIEVVDHMSEH------GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 462
Query: 152 SLNAALKVLTESRDLKAIQAFLMEV------PEKFHIQF--------------------- 184
+ LK L + + + + E+ P++
Sbjct: 463 AYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522
Query: 185 -------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
DI ++N +I C +D A ++ ++Q G KPD++T+ TL+ +R
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E L M+ C P+ TFN I L K QA + + +M G P+ TY++V
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ ++G A ++ S M P+ Y T+I L + G A + + +
Sbjct: 643 VDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
P T +L G+ + + +A ++ VQ
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ 731
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT---ESRDLKAIQAFLMEVPEKFHIQFDIF 187
I AM+ D+ GCK + + N LK L D + + A +M + + D
Sbjct: 547 IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM----RSNCPPDEL 602
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN VI + C+ G+L +A + M + G P+ TY+ ++ A K + + L + M
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P+L T+N I +L + +A L+ +M G+ PD TY + G CR
Sbjct: 663 T-NG-TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT 720
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A ++ + L P+ Y ++ C++ +LA + +P T L
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVIL 780
Query: 368 LEGL 371
LE L
Sbjct: 781 LEAL 784
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N ++ +C G ++ A ++ M PD T+ LI A R +++
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFD 275
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +GC P++ T+++ + + QA L+ M+ G EPD VTYN++I C G
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+D A + S + P+ Y ++ LC
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 8/255 (3%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F + L G R++ E L+ + E ++ + G++ A++T M
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKA--IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
GC + + + L LKA QA L + + D+ ++N VI + G
Sbjct: 629 ENGCVPNSSTYSIVVDAL-----LKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAG 683
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+++A ++ M G+ PD TY +L +++ + + + G P+ +N
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ RR+ A M G PDE TY ++++ G LD AK++ +++
Sbjct: 744 DVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSL 803
Query: 321 RLMPNRKIYQTMIHY 335
++ ++K+ + HY
Sbjct: 804 GVL-DKKLIEEESHY 817
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVK--PDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+++ + G +D+A ++ M G + P V+ LI D R ++ +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G + T+N + R A +L+ M PD T+N +I+ C G + A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
V+ ML R P+ Y ++ C+E + A + + K P + T + L+
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 371 L 371
+
Sbjct: 331 M 331
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 7/268 (2%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTF 138
Y++ +S + A + D + + +S +G + +M+ G ++ A +
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRS--RGFSPDVVTYNIMIGSLCSRGKLELAFEVM 189
Query: 139 YDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
++ GCK +V + ++ + E R +A++ F V ++ D++++N +I+ C
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG--LRPDLYTYNAIIRGIC 247
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ G+ D+A + + G PDV++Y L+ +F +R E G L MV GC PN+
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T ++ I + R +A ++ +M+ G+ PD +Y+ +I FC+ G LD+A + M
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ +P+ Y T++ LC+ G +LA
Sbjct: 368 VSDGCLPDIVNYNTILATLCKFGCADLA 395
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 2/277 (0%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
R+ +M+++ +AG ++ + G K V +K SR+LK +
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMR-V 119
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
ME+ E + D++S+N +I F + +D A V M+ G PDV+TY +I +
Sbjct: 120 MEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCS 178
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ E+ + + ++ GC P++ T+ + I+ + + R +A +L + G+ PD T
Sbjct: 179 RGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYT 238
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
YN +I+G C+ G D A + R P+ Y ++ + + + KD +
Sbjct: 239 YNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMV 298
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T S L+ + + +A ++ +++ +
Sbjct: 299 LSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 3/233 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
DM L GC+ V + + + E R +A+ ++EV ++ + D +S++ +I AFC+
Sbjct: 296 DMVLSGCEPNVVTHSILISSFCREGRVREAVN--VLEVMKEKGLTPDSYSYDPLISAFCK 353
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G LD A + +M G PD++ Y T+++ K ++ ++ + GC P +
Sbjct: 354 EGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRA 413
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N L + +A +++ M R GI+PDE+TYN +I CR G +D A + M
Sbjct: 414 YNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDME 473
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R P + ++ +C+ + ++K +P+ + L+EG+
Sbjct: 474 ATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 9/263 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFD 185
K GM A+D + GC V S N L+ L +SR + LM+ + +
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGER--LMKDMVLSGCEPN 305
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + +I+I +FC G + +A V+ M++ G+ PD +Y LISAF K+ R ++
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV GC P++ +N + L + A + + G P YN + G
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A ++ S M+ + + P+ Y ++I LC++G + A + D + P+V + +
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFN 485
Query: 366 ALLEGLKKNNQPCKANTIMALVQ 388
+L G+ CKA+ + ++
Sbjct: 486 IVLLGM------CKAHRVFEGIE 502
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 116/248 (46%), Gaps = 3/248 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G I A++ F ++ G + + + NA ++ + E + +A+ F+ + + D+
Sbjct: 215 GRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALD-FVRHLSAR-GCNPDVV 272
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+NI++++F + +M +M G +P+V+T++ LIS+F ++ R + +M
Sbjct: 273 SYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM 332
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+ +++ I + R A + + M G PD V YN ++ C+ G
Sbjct: 333 KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA 392
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D+A V+ + P + Y TM L G+ A M + ++K P T ++L
Sbjct: 393 DLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSL 452
Query: 368 LEGLKKNN 375
+ L ++
Sbjct: 453 ISCLCRDG 460
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ Y+++ +S R D LE S LP I+ + +G A + A+
Sbjct: 340 DSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADL---AL 396
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVL-TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
D F + GC TV++ N L + +KA++ + E+ K I D ++N +I
Sbjct: 397 DVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE-MISEMIRK-GIDPDEITYNSLIS 454
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C G++D+A ++V+M+ +P VI++ ++ K +R G L MV KGC P
Sbjct: 455 CLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLP 514
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
N ++ + I+ + +A +L + R G+
Sbjct: 515 NETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE--SRDLKAIQAFLMEVPEKFHI 182
+ K G + A++ M GC + + N L L + DL A+ F E ++
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADL-ALDVF--EKLDEVGC 407
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++N + A G KA ++ EM + G+ PD ITY +LIS +D + G
Sbjct: 408 PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M P + +FN+ + + R ++ +L+ M G P+E +Y L+I+G
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527
Query: 303 RSG----HLDMAKKVY 314
+G +++A +Y
Sbjct: 528 YAGWRAEAMELANSLY 543
>gi|125532572|gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
Length = 508
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+AG+ + ++ F + + S NA L L I+ ++ + H D
Sbjct: 229 GRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSP-D 287
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N+V++A +G L++ + ++ EM K G+ PD+ TY L+ K ++P L N
Sbjct: 288 VLTYNVVMRAKYMLGKLNQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLN 347
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC P + F I L M + G +PD V Y ++I G+ +G
Sbjct: 348 YMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAG 407
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D A+K + ML R +PN Y +MI LC G+F+ A + KD + P+ S
Sbjct: 408 EFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYS 467
Query: 366 ALLEGLKKNNQPCKANTIM 384
L+ L+ + +AN I+
Sbjct: 468 TLVSRLRNAGKDSEANNII 486
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + GK A++ M GC TV + L+ + +L+A + F E+ +K
Sbjct: 329 LLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKK- 387
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
Q D+ + ++I + G D+A +M G P+V TY ++I +
Sbjct: 388 GCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKA 447
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L M +GC PN ++ + L N + +AN ++ M G
Sbjct: 448 CSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKG 493
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 111/281 (39%), Gaps = 76/281 (27%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI-------------------S 229
+N+++K F E G L + ++ +M G+ T+ L+ S
Sbjct: 186 YNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTSGRAGLRRRLVERFIKSS 245
Query: 230 AF-YKDNRPEIGNGLWNL---------------MVCKGCFPNLATFNV--RIQHLVNKRR 271
F Y+ R L L M+ +G P++ T+NV R ++++ K
Sbjct: 246 NFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYMLGKLN 305
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNL----------------------------------- 296
Q +KL+ M + G+ PD TYNL
Sbjct: 306 --QFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHFTN 363
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I G R+G+L+ K + M+ + P+ Y MI G+F+ A D + +
Sbjct: 364 LIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRG 423
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPHFS 395
+P+V T ++++ GL + KA +++ ++ R P+F+
Sbjct: 424 QLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFT 464
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG ++ F +M GC+ V + + + Q F ++ + + ++
Sbjct: 370 RAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRGQLP-NV 428
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I C +G DKA ++ +M+ G P+ Y+TL+S + N +
Sbjct: 429 YTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEANNIIQY 488
Query: 247 MVCKGCFPNLAT 258
M KG + +L +
Sbjct: 489 MTNKGHYLHLLS 500
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F DM GC+ V + N + L + + A L ++ E Q ++
Sbjct: 175 KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA-GCQPNM 233
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I + C ++++A + M+ G+ PD+ TYT+LI K +R + + L N
Sbjct: 234 VTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNE 293
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT------------- 293
M P++ TFNV + + + +A ++ M G+EP+ VT
Sbjct: 294 MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTD 353
Query: 294 ----------------------YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
YN++I G+C++ +D A ++++ M+ + L PN Y T
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+IH CQ G A + ++ +P + T S LL+G K KA
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKA 462
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 103/196 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I++ +I + FC++ +D + V+ ++ KLG++P ++T+TTLI+ K L+
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV KGC P++ T+N I L + A L+ M+ G +P+ VTY+ +I CR
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++S M + + P+ Y ++I LC+ + A + + N +P + T
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306
Query: 365 SALLEGLKKNNQPCKA 380
+ L++ K + +A
Sbjct: 307 NVLVDTFCKEGKVSEA 322
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q I +F +I C++G +A + +M G +PDV TY T+I+ K
Sbjct: 156 KLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETA 215
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
GL M GC PN+ T++ I L R +A + M+ GI PD TY +I
Sbjct: 216 AAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLI 275
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G C+ A + + M +MP+ + ++ C+EG + A + K +
Sbjct: 276 QGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVE 335
Query: 359 PSVDTISALLEG 370
P+V T S+L+ G
Sbjct: 336 PNVVTYSSLMYG 347
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 126/254 (49%), Gaps = 8/254 (3%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF--LMEVPEKFHIQF------DIFSFNIVIKAF 196
G +T+ + V+T S + + ++E + FH+ +IFS+NI+I +
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ +D+A + EM G+ P+ ++Y TLI F + + L+ M G P+L
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+++ + + +A +L MQ ++P+ V Y +++ C+SG+ A+K++S
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSE 503
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + L P+ ++Y T+I+ LC+EG + A ++ P + + ++ GL ++
Sbjct: 504 LFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKD 563
Query: 377 PCKANTIMALVQRR 390
+A ++ ++ R
Sbjct: 564 ESRALLLVGEMRDR 577
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 186 IFSFNIVIKAFCEMG-ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I F ++ A +MG D + +M+ +G+ P++ T + ++ F + R ++G +
Sbjct: 92 IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ G P + TF I L QA +L M G +PD TYN +I G C+
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A + M PN Y T+I LC++ N A + K P + T
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 365 SALLEGLKK 373
++L++GL K
Sbjct: 272 TSLIQGLCK 280
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 8/246 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFH--IQFDIF 187
+ A F+ M GCK + S N + +++ + +A+Q F E H + +
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF----NEMIHQGLTPNNV 409
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+N +I FC++G L +A + M G PD+ TY+ L+ F K L+ M
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
PNL + + + + A KL + G++P Y +I G C+ G L
Sbjct: 470 QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLL 529
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV-DTISA 366
D A + + M P+ Y +I L Q D + A ++ + + ++ V +S
Sbjct: 530 DEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLSE 589
Query: 367 LLEGLK 372
+ +G K
Sbjct: 590 VCQGKK 595
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 219 PDVITYTTLISAFYKDNRP-EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P +I + L+SA K + ++ L M G PN+ T ++ + +R
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
++ + + G++P VT+ +I G C+ G A +++ M+ + P+ Y T+I+ LC
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ G+ A + K + P++ T S L++ L ++
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 36/201 (17%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA I AM F +M G S N + + L+ Q + ++
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP- 441
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL----------------------------- 215
D+F+++I++ FC+ G L KA+ + MQ
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLF 501
Query: 216 ------GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
G++P V YTT+I+ K+ + + M GC P+ ++NV I+ L+
Sbjct: 502 SELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQH 561
Query: 270 RRSWQANKLMGLMQRFGIEPD 290
+ +A L+G M+ G D
Sbjct: 562 KDESRALLLVGEMRDRGFIAD 582
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N ++ C+ +++A+ ++ M GV PDVITY+ L+ AF K +R + L
Sbjct: 257 NVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 316
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +GC PN+ TFN I L RS +A ++ + + PD+VT+N++I G C++
Sbjct: 317 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ + A ++ M+ + + P+ + +I LC+ G A + P+V T
Sbjct: 377 GNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 436
Query: 365 SALLEGLKKNN---QPCK 379
+ L+ GL K+ +PC+
Sbjct: 437 NVLVHGLCKSGRIEEPCE 454
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 34/279 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFL-----MEVPE 178
+ KA + A++ + M GC V + N+ + L +S R +A Q L M VP+
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPD 362
Query: 179 KF----------------------------HIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K ++Q D+ +F +I C+ G ++ A ++
Sbjct: 363 KVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILD 422
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
M LGV P+V+TY L+ K R E MV GC P T+ + L
Sbjct: 423 LMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRAS 482
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R+ A +L+ ++ FG +PD VTYN+++ G +SG + A V M+G+ P+ +
Sbjct: 483 RTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFA 542
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
L + G+ + + + K +P T S++L+
Sbjct: 543 ACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ D +F+ +I C+ G D+A +M G P+V+TY L++ K ++ E
Sbjct: 218 SLRVSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKME 275
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ + MV KG P++ T++V + R +A +L+ M G P+ VT+N +I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+S A ++ + R L+P++ + +I C+ G+F A + ++ + KN
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALV 387
P V T AL++GL K Q A I+ L+
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLM 424
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 38/293 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A + DM G V + NA + L ++ ++ A + + +K + D+
Sbjct: 237 KCGQTDEACND--DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK-GVTPDV 293
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--------- 237
++++++ AFC+ +D+A ++ M G P+V+T+ ++I K +R
Sbjct: 294 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQ 353
Query: 238 --------------------------EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
E + L+ MV K P++ TF I L +
Sbjct: 354 VYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQ 413
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A ++ LM G+ P+ VTYN+++ G C+SG ++ + M+ +P Y +
Sbjct: 414 VEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGS 473
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+++ LC+ + A + W P T + L++GL K+ + +A T++
Sbjct: 474 LVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 526
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVM-VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +NIV+++ C G +A + EM + GV P ++TY T+I+ K N G L+
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+V +G P++ T+N I L +A +L G M G P+ VTY+++I G C+
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164
Query: 305 GHLDMAKKVYSAMLGRR--LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G +D A+++ M + ++PN Y + + LC++ A + + + S D
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224
Query: 363 TI--SALLEGLKKNNQ 376
T+ S L++GL K Q
Sbjct: 225 TVTFSTLIDGLCKCGQ 240
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 39/303 (12%)
Query: 127 KAGMIKHAMDTFY-DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
+AG A++ F +M G T+ + N + L +S +L A E+ ++ H D
Sbjct: 57 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGH-HPD 115
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I + C+ G L++A + M G P+V+TY+ LI+ K R + L
Sbjct: 116 VVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 175
Query: 246 LMVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLM----------------------GL 281
M K C PN+ T+N + L + + +A +LM GL
Sbjct: 176 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 235
Query: 282 -------------MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
M G P+ VTYN ++ G C++ ++ A + +M+ + + P+
Sbjct: 236 CKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 295
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y ++ C+ + A + + P+V T +++++GL K+++ +A I V
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVY 355
Query: 389 RRV 391
R+
Sbjct: 356 NRM 358
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++A +N+ +Q L + +A ++ G M R G+ P VTYN +I G C+S L ++
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++ R P+ Y T+I LC+ GD A + + VP+V T S L+ GL K
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S+ +I +C++ I+DKA + EM + G+ PD +TY TLI R L++
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 393
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G P+L T+ + +L R +A L+ +++ ++PD Y++V+ G CR+G
Sbjct: 394 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 453
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A+ ++S + + L P+ + Y MI+ LCQ+G A + + + P+ T +
Sbjct: 454 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYN 513
Query: 366 ALLEGLKKNNQPCKA 380
+ G +NN+ +A
Sbjct: 514 LITRGFLRNNETLRA 528
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F +I+ C G + +A + +M G +PDV+TY TLI+ K M
Sbjct: 126 TFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ C P + ++ I L R+ +A L M GI P+ TY+ +I G C GH
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A +++ AM+ R++MP++ + T++ LC+EG A+ + ++ + P V T ++L
Sbjct: 246 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL 305
Query: 368 LEG 370
++G
Sbjct: 306 MDG 308
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E + +A+Q F E F Q D+ ++ +I C++G A + M++ +P V
Sbjct: 137 EGKIGEALQLFDKMTGEGF--QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTV 194
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y+T+I + KD + L++ M+ KG PN T++ I L +A +L
Sbjct: 195 VVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 254
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M I PD++T+N ++ C+ G + A V M+ L P+ Y +++ C +
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE 314
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++K VPSV + + L+ G K
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCK 346
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A+ M C+ TV + + L + R L + ++ K I +
Sbjct: 171 KVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK-GISPNN 229
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ +I C +G +A + M + PD +T+ TL+ A K+ + + ++
Sbjct: 230 FTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ P++ T+N + + + + M R G P ++Y +I G+C+
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ M + L+P+ Y T+IH LC G A + + + +P + T
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
L + L KN++ +A ++ +++
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIE 431
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 2/227 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K ++ AM F +M G + N + L L+ A E+ I
Sbjct: 344 YCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP- 402
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+ C+ L +A +++ ++ + PD+ Y+ ++ + E L+
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 462
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG P++ T+ + I L + +A+KL G M G P+ TYNL+ +GF R+
Sbjct: 463 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN 522
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIMCK 350
A +++ ML R + ++ L +G D ++ I+C+
Sbjct: 523 NETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A + M ++ P ++ ++ L+++ + L+ M G N T N+
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + R A ++G + + G +P T+ +I+G C G + A +++ M G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
P+ Y T+I+ LC+ G+ + A + ++N P+V S +++ L K+ Q +A
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 382 TIMA 385
++ +
Sbjct: 215 SLFS 218
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 54/137 (39%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ F+ + + + L M FGI + T N++I FC L A V
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+L P+ + T+I LC EG A + + + P V T L+ GL K
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 374 NNQPCKANTIMALVQRR 390
A + +++R
Sbjct: 172 VGNTSTAIRFLRSMEQR 188
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 8/253 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I AMD F M C TV++ +K L S + E+ EK I+ +I ++
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEK-GIKPNIHTYT 362
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I + C L+KA ++ +M + G+ P+VITY LI+ + K E + LM +
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
PN T+N I+ KR +A ++ M + PD VTYN +I G CRSG+ D A
Sbjct: 423 NLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ S M R L+P+ Y +MI LC+ A + +K+ +P+V +AL++G
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDG 541
Query: 371 LKKNNQPCKANTI 383
CKA +
Sbjct: 542 Y------CKAGKV 548
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++ +I +C+ LD A+ V EM G + + + YT LI + R + L+
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLF 311
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C+P + T+ V I+ L R +A L+ M+ GI+P+ TY ++I C
Sbjct: 312 VKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQ 371
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L+ A+++ ML + LMPN Y +I+ C+ G A + + +N P+ T
Sbjct: 372 CKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTY 431
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRV 391
+ L++G K N + +++R+V
Sbjct: 432 NELIKGYCKRNVHKAMGVLNKMLERKV 458
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 1/204 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
++E+ E +++ + ++N +IK +C+ + KA V+ +M + V PDV+TY +LI
Sbjct: 415 VVELMESRNLRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + L +LM +G P+ T+ I L +R +A L +++ + P+ V
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
Y +I G+C++G ++ A + ML + +PN + +IH LC +G A ++ +
Sbjct: 534 MYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKM 593
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+K + P+V T + L+ L K+
Sbjct: 594 VKIDLQPTVSTDTILIHRLLKDGD 617
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 2/245 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K GMI+ A+D M + ++ N +K + R++ L ++ E+ +
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLER-KVLP 460
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I C G D AY ++ M G+ PD TYT++I + K R E L+
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + K PN+ + I + +A+ ++ M P+ +T+N +I G C
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + M+ L P +IH L ++GDF+ AY + + P T
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640
Query: 365 SALLE 369
+ ++
Sbjct: 641 TTFIQ 645
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 146/355 (41%), Gaps = 34/355 (9%)
Query: 72 HNRIVIENKYAFEDTVSRLAGARRFDYIEHL---LEHQKSLPQGRREGFIMRIMML--YG 126
++R ++ + + + + L ++R + L LE + +P +M ++ Y
Sbjct: 489 NDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPN-----VVMYTALIDGYC 543
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A M C + NA + L LK L E K +Q +
Sbjct: 544 KAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKE-ATLLEEKMVKIDLQPTV 602
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ I+I + G D AY +M G KPD TYTT I + ++ R + +
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK------- 299
M G P+L T++ I+ + R+ A ++ M G EP + T+ +IK
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 300 --------GFCRSGHL---DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G C ++ D+ ++ M+ + PN K Y+ ++ +C+ G+ +A +
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782
Query: 349 CKDSMKKNWV-PSVDTISALLE---GLKKNNQPCKANTIMALVQRRVPHFSSNQL 399
+K + PS +ALL L+K+N+ K M V +P S ++
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVG-HLPQLESCKI 836
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 18/228 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA---------------- 168
YG G A MH GC+ + + + +K L E + K
Sbjct: 682 YGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEF 741
Query: 169 -IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ-KLGVKPDVITYTT 226
I L+E + + + S+ ++ CE+G L A V MQ K G+ P + +
Sbjct: 742 DIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNA 801
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L+S K + + + M+C G P L + + I L K + + + + G
Sbjct: 802 LLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCG 861
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
DE+ + ++I G + G ++ ++++ M + + Y +I
Sbjct: 862 YYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ +A++ FY M G + + N + L+ S L ++ ++ I ++ F
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFT 258
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I F + G L +A + EM + V P+V TY +LI+ F +++LMV K
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GCFP++ T+N I +R KL M G+ D TYN +I G+C++G L++A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+KV++ M+ + P+ Y ++ LC G A +M +D K + T + +++G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 371 LKKNNQ 376
L + ++
Sbjct: 439 LCRTDK 444
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
I +L E I D++SF I+I FC L A ++ +M KLG +P ++T +L+
Sbjct: 97 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 156
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F + NR + L + M G PN+ +N I L R A ++ M++ GI
Sbjct: 157 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
D VTYN +I G SG A ++ M+ R++ PN + +I +EG+ A +
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 349 CKDSMKKNWVPSVDTISALLEGL 371
K+ ++++ VP+V T ++L+ G
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGF 299
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 94/176 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I FC+ ++ + EM G+ D TY TLI + + + + ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G P++ T+N+ + L N + +A ++ +Q+ ++ D +TYN++I+G CR+
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
L A ++ ++ + + P+ Y TMI LC++G A +C+ + ++PS
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L++ + F ++ +N VI C+ L+ A V M+K G++ D +TY TLIS
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L MV + PN+ F I V + +A L M R + P+
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TYN +I GFC G L AK ++ M+ + P+ Y T+I C+
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + ++ FC+ +A ++ M G P+V+ Y T+I+ K+ ++
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG + T+N I L N R A +L+ M + I+P+ + + +I F + G
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+L A+ +Y M+ R ++PN Y ++I+ C G A M + K P V T +
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 366 ALLEGLKKNNQ 376
L+ G K+ +
Sbjct: 329 TLITGFCKSKR 339
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
++G G K+ D M GC V + N + +S+ ++ E+ + +
Sbjct: 301 IHGCLGDAKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D F++N +I +C+ G L+ A V M GV PD++TY L+ + + E +
Sbjct: 358 -DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ ++ T+N+ IQ L + +A L + R G++PD + Y +I G CR
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMI--HY 335
G A K+ M MP+ +IY + HY
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
D A+ + EM + P ++ +T +++ K N+ +I L++ M G +L +F +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I R A L+G M + G P VT ++ GFC+ A + +M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLA----YIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+PN IY T+I+ LC+ D N A Y M K ++ + V T + L+ GL + +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV----TYNTLISGLSNSGRW 235
Query: 378 CKANTIM-ALVQRRV 391
A ++ +V+R++
Sbjct: 236 TDAARLLRDMVKRKI 250
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A FY M G +++ N L + + ++ E+ + I +++FNI+
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM-FRLRISSTVYTFNIM 255
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C+ G L KA + M+ LG KP+V++Y T+I + E + + M KG
Sbjct: 256 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 315
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+ I + + R +A+ L M G+ P+ VTYN +I G+C G L+ A
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
M+ + +MP+ Y ++H L EG A M K+ KK +P T + L+ G
Sbjct: 376 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 435
Query: 373 KNNQPCKA 380
+ KA
Sbjct: 436 RCGNAKKA 443
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 49/364 (13%)
Query: 71 AHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI------MML 124
+ +R+ +++ F+ V RR D E K + +G + +I + L
Sbjct: 170 SRDRLSVKSSIVFDLLVRVCCELRRAD------EAFKCFYMMKEKGIVPKIETCNDMLSL 223
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K ++ A + +M TV + N + VL + LK + F+ E +
Sbjct: 224 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFI-GFMEGLGFKP 282
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I + G ++ A ++ M+ G++PD TY +LIS K+ R E +GL+
Sbjct: 283 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342
Query: 245 NLMV------------------C-----------------KGCFPNLATFNVRIQHLVNK 269
+ MV C KG P+++T+N+ + L +
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 402
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R +A+ ++ M++ GI PD +TYN++I G+ R G+ A +++ ML + + P Y
Sbjct: 403 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 462
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++I+ L + A + + + + P V +A+++G N +A ++ + R
Sbjct: 463 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDR 522
Query: 390 R-VP 392
+ VP
Sbjct: 523 KSVP 526
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I + G KA+ + EM G++P +TYT+LI + NR + + L+
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ +G P++ FN + +A L+ M R + PDEVT+N +++G CR
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A+ + M R + P+ Y T+I + GD A+ + + + + P++ T
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRVPHFSSNQLSAFKSI 405
+AL++ L KN + A ++ +V + + S LS + +
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I +C G L++A+ EM K G+ P V TY L+ A + + R + + M
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+ T+N+ I + +A L M GIEP VTY +I R +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ +L + + P+ ++ M+ C G+ A+++ K+ +K+ P T + L
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535
Query: 368 LEGLKKNNQPCKANTIMALVQRR---VPHFSSNQL 399
++G + + +A ++ ++RR H S N L
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G K A D +M G + T + + + VL+ +K ++ ++ +
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ-GVSP 492
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ FN ++ C G +++A++++ EM + V PD +T+ TL+ ++ + E L
Sbjct: 493 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+ ++N I + A ++ M G P +TYN +IK C++
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
D+A+++ M+ + + P+ Y ++I
Sbjct: 613 QEGDLAEELLKEMVNKGISPDDSTYLSLIE 642
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 106 QKSLPQGRREGFIMRIMMLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+K L QG IM M+ G G ++ A +M +++V L +
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD----RKSVPPDEVTFNTLMQG 538
Query: 164 R--DLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
R + K +A L++ ++ I+ D S+N +I + G + A+ V EM +G P
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
++TY LI K+ ++ L MV KG P+ +T+ I+ + N
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 646
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M+ + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A ++ EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G+ PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K + D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK-GLXPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ +A++ FY M G + + N + L+ S L ++ ++ I ++ F
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFT 783
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I F + G L +A + EM + V P+V TY +LI+ F +++LMV K
Sbjct: 784 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GCFP++ T+N I +R KL M G+ D TYN +I G+C++G L++A
Sbjct: 844 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 903
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+KV++ M+ + P+ Y ++ LC G A +M +D K + T + +++G
Sbjct: 904 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 963
Query: 371 LKKNNQ 376
L + ++
Sbjct: 964 LCRTDK 969
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ +M G V + N L L S L ++ ++ I D+
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDV 246
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F +I F + G LD+A + EM + V P+ +TY ++I+ R ++L
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGCFPN+ T+N I R + KL M G D TYN +I G+C+ G
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L +A ++ M+ RR+ P+ + ++H LC G+ A + D + + +
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 367 LLEGLKKNNQPCKA 380
++ GL K ++ KA
Sbjct: 427 MIHGLCKADKVEKA 440
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
I +L E I D++SF I+I FC L A ++ +M KLG +P ++T +L+
Sbjct: 622 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 681
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F + NR + L + M G PN+ +N I L R A ++ M++ GI
Sbjct: 682 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 741
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
D VTYN +I G SG A ++ M+ R++ PN + +I +EG+ A +
Sbjct: 742 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 801
Query: 349 CKDSMKKNWVPSVDTISALLEGL 371
K+ ++++ VP+V T ++L+ G
Sbjct: 802 YKEMIRRSVVPNVFTYNSLINGF 824
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 2/216 (0%)
Query: 158 KVLTESRDLKAIQA--FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
++LT + +L+ + + + E + I D++SF I+I FC L A V+ +M KL
Sbjct: 76 RLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL 135
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G +P ++T+ +L+ F NR L LMV G PN+ +N I L A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M++ G+ D VTYN ++ G C SG A ++ M+ R + P+ + +I
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++G+ + A + K+ ++ + P+ T ++++ GL
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 1/233 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M LYG + S + L + L ++ K + I +F ++ FC +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM-KLGYEPSIVTFGSLLHGFCLVN 155
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A+ +++ M K G +P+V+ Y TLI K+ I L N M KG ++ T+N
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L R A +++ M + I PD VT+ +I F + G+LD A+++Y M+
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ PN Y ++I+ LC G A K P+V T + L+ G K
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 94/176 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I FC+ ++ + EM G+ D TY TLI + + + + ++
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G P++ T+N+ + L N + +A ++ +Q+ ++ D +TYN++I+G CR+
Sbjct: 908 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 967
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
L A ++ ++ + + P+ Y TMI LC++G A +C+ + ++PS
Sbjct: 968 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L++ + F ++ +N VI C+ L+ A V M+K G++ D +TY TLIS
Sbjct: 696 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 755
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L MV + PN+ F I V + +A L M R + P+
Sbjct: 756 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 815
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
TYN +I GFC G L AK ++ M+ + P+ Y T+I C+
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 861
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + ++ FC+ +A ++ M G P+V+ Y T+I+ K+ ++
Sbjct: 674 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 733
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG + T+N I L N R A +L+ M + I+P+ + + +I F + G
Sbjct: 734 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 793
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+L A+ +Y M+ R ++PN Y ++I+ C G A M + K P V T +
Sbjct: 794 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 853
Query: 366 ALLEGLKKNNQ 376
L+ G K+ +
Sbjct: 854 TLITGFCKSKR 864
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
++G G K+ D M GC V + N + +S+ ++ E+ + +
Sbjct: 826 IHGCLGDAKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D F++N +I +C+ G L+ A V M GV PD++TY L+ + + E +
Sbjct: 883 -DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 941
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ ++ T+N+ IQ L + +A L + R G++PD + Y +I G CR
Sbjct: 942 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMI--HY 335
G A K+ M MP+ +IY + HY
Sbjct: 1002 KGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 1035
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
D A+ + EM + P ++ +T +++ K N+ +I L++ M G +L +F +
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I R A L+G M + G P VT ++ GFC+ A + +M G
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLA----YIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+PN IY T+I+ LC+ D N A Y M K ++ + V T + L+ GL + +
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV----TYNTLISGLSNSGRW 760
Query: 378 CKANTIM-ALVQRRV 391
A ++ +V+R++
Sbjct: 761 TDAARLLRDMVKRKI 775
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 94/231 (40%), Gaps = 41/231 (17%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDI----FSFNIVIKAFCEMGILDK 204
+S+N + T D+ Q L E E + IQ + ++N +I C G L
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A M G P+V+TY TLIS F K + G L+ M C+G ++ T+N I
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 265 HL--VNKRR------SWQANK------------LMGLMQRFGIEP-----DE-------- 291
V K R W ++ L GL IE D+
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 292 --VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
V YN++I G C++ ++ A +++ + + P+ + Y MI LC+ G
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L + F R E L+ MV P++ F + N RR M+ +G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC---QEGD-F 342
I D ++ ++I FCR L A V M+ P+ + +++H C + GD F
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+L +M +K + P+V + L++GL KN +
Sbjct: 162 SLVILM----VKSGYEPNVVVYNTLIDGLCKNGE 191
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++F +V+K+FC+ G L Y + +M G+ PD I Y LI + K R + N L+
Sbjct: 9 YTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P++ T+N + + + +A +L M G EPD VTY+ +I G C++G
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 307 LDMA-KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A + ++ M+ R N Y +I+ LC++ + AY + ++ K +VP T +
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 366 ALLEGL 371
+L GL
Sbjct: 189 TILSGL 194
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 127 KAGMIKHAMDT-FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
K G + A++ F+ M GC + NA + L + +++ L E+ K ++ D
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP-D 183
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE------- 238
++N ++ C MG + +A M G PDV+ Y L+ A YK+ + +
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Query: 239 --IGNG--------------------------LWNLMVCKGCFPNLATFNVRIQHLVNKR 270
I G ++ MV GC PN AT+++ + +
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ A+K++ M + G PD VTYN+++ G C++ +D A +++S M+ P+ Y
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+++ LC+ + A ++ +++ VP V T + L++GL CKA +
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL------CKAGKL 410
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++IV+ C +D A+ V+ EM K+G PDV+TY L+ K N + + L++ M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V GC P++ +++V + L + A L M + PD VT+N+++ G C++G L
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D AK + M P+ Y T+++ L ++G
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQG 443
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 36/231 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR----- 236
I D +NI+I + + G +D+A + EM +G++P + TY +L++AF K+ +
Sbjct: 39 ISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAM 98
Query: 237 ------------PEI-----------GNG--------LWNLMVCKGCFPNLATFNVRIQH 265
P++ G L++ M+ +GC N +N I
Sbjct: 99 ELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALING 158
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L +A KL+ M G PD +TYN ++ G CR G + AK+ + +M R P+
Sbjct: 159 LCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPD 218
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y ++ L +EG + A + KD + K ++P T +++L GL + +
Sbjct: 219 VVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C PN TF V ++ + + KL M GI PD + YN++I G+ + G +D A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++Y M+ L P+ Y ++++ C+E A + K +K + P V T S ++ GL
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 372 KKNNQPCKA 380
K + +A
Sbjct: 124 CKTGKVTEA 132
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P+ T+ ++ +F K + G L+ M+ G P+ +N+ I K R +AN+L
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M G+EP TYN ++ FC+ + A +++ M + P+ Y T+I LC+
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTIS--ALLEGLKKN 374
G A M M + S +T++ AL+ GL K+
Sbjct: 126 TGKVTEALEMLFHKMIERGC-SANTVAYNALINGLCKD 162
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI S+++V+ C+ + A ++ M + + PDV+T+ L+ K + + L
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ M C GC P+ +N + L + R QA++L M+ G D
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 16/322 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE----- 115
+K ++F + +VI + ++ L G+ R D I +H L +G E
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIA---DHFDKLCRGGIEPSGVS 218
Query: 116 --GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
GF++ + G+ + A+D + G + + S N LK L S D + + L
Sbjct: 219 AHGFVLDALFCKGE---VTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVASRL 273
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ +F +I FC+ G +D+A+ + M++ G++PD+I Y+TLI ++K
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+G+ L++ + KG ++ F+ I V A+ + M GI P+ VT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++IKG C+ G + A +Y +L R + P+ Y ++I C+ G+ + + +D +
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 354 KKNWVPSVDTISALLEGLKKNN 375
K + P V L++GL K
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQG 475
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAF-LMEVPEKFHIQF 184
K G++ HAM M + V N+ + +R +A++ F LM + + I+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI---YGIKP 529
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F V++ G L++A + M K+G++PD + Y TLI AF K +P IG L+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM ++A NV I L R A+K + +EPD VTYN +I G+C
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A++++ + PN +IH LC+ D + A M +K P+ T
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 365 SALLEGLKKN 374
L++ K+
Sbjct: 710 GCLMDWFSKS 719
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAGM+ F G K V ++ + V +S DL + + I
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISP 389
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I+IK C+ G + +A+ + ++ K G++P ++TY++LI F K G L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P++ + V + L + A + M I + V +N +I G+CR
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A KV+ M + P+ + T++ EG A + K P
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
L++ K+ +P + L+QR
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQR 594
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I +C + LD+A + ++ P+ +T T LI K+N + ++
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++M KG PN T+ + + KL MQ GI P V+Y+++I G C+
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +D A ++ + +L+P+ Y +I C+ G
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ E+ + L +L++ G PN+ TF I + +A L +M++ GIEPD + Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I G+ ++G L M K++S L + + + ++ + I + GD A ++ K +
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T + L++GL ++ + +A + + +R
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ I+I C+ +D A + M + G KP+ +TY L+ F K E L+ M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P++ ++++ I L + R +A + + PD V Y ++I+G+C+ G L
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
A +Y ML + P+ + + + Y
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRALSEY 820
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L ++ ++ I DI N+VI + ++ A + + ++PD++TY T+I +
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R + ++ L+ PN T + I L A ++ +M G +P+ V
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY ++ F +S ++ + K++ M + + P+ Y +I LC+ G + A + +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ +P V + L+ G K + +A
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +++ + G++ A V+M ++ +V+ + +LI + + NR + ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM G P++ATF ++ + + R +A L M + G+EPD + Y +I FC+
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ +++ M ++ + + +IH L
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
RR D E + E K P G + ++ + K + A+ F M G K +
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
+ ++S D++ E+ EK I I S++I+I C+ G +D+A + +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+ PDV+ Y LI + K R L+ M+ G P+
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 197 CEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAFYKDNRPEIGNGLWNL--------- 246
C G++DKA + V +LGV P Y L S D I + L
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 247 ----------MVCKGCFPNLATFNVRIQH------LVNKRRSWQ---------ANKLMGL 281
+ CKG F+ + +V+ + + A++L+ L
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ G P+ VT+ +I GFC+ G +D A ++ M R + P+ Y T+I + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + ++ K V S+ ++ K+ A+ +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A FY M G +++ N L + + ++ E+ + I +++FNI+
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM-FRLRISSTVYTFNIM 233
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C+ G L KA + M+ LG KP+V++Y T+I + E + + M KG
Sbjct: 234 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 293
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+ I + + R +A+ L M G+ P+ VTYN +I G+C G L+ A
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
M+ + +MP+ Y ++H L EG A M K+ KK +P T + L+ G
Sbjct: 354 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 413
Query: 373 KNNQPCKA 380
+ KA
Sbjct: 414 RCGNAKKA 421
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 49/364 (13%)
Query: 71 AHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI------MML 124
+ +R+ +++ F+ V RR D E K + +G + +I + L
Sbjct: 148 SRDRLSVKSSIVFDLLVRVCCELRRAD------EAFKCFYMMKEKGIVPKIETCNDMLSL 201
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K ++ A + +M TV + N + VL + LK + F+ E +
Sbjct: 202 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFI-GFMEGLGFKP 260
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I + G ++ A ++ M+ G++PD TY +LIS K+ R E +GL+
Sbjct: 261 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320
Query: 245 NLMV------------------C-----------------KGCFPNLATFNVRIQHLVNK 269
+ MV C KG P+++T+N+ + L +
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 380
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R +A+ ++ M++ GI PD +TYN++I G+ R G+ A +++ ML + + P Y
Sbjct: 381 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 440
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++I+ L + A + + + + P V +A+++G N +A ++ + R
Sbjct: 441 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDR 500
Query: 390 R-VP 392
+ VP
Sbjct: 501 KSVP 504
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I + G KA+ + EM G++P +TYT+LI + NR + + L+
Sbjct: 401 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ +G P++ FN + +A L+ M R + PDEVT+N +++G CR
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A+ + M R + P+ Y T+I + GD A+ + + + + P++ T
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRVPHFSSNQLSAFKSI 405
+AL++ L KN + A ++ +V + + S LS + +
Sbjct: 581 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I +C G L++A+ EM K G+ P V TY L+ A + + R + + M
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+ T+N+ I + +A L M GIEP VTY +I R +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ +L + + P+ ++ M+ C G+ A+++ K+ +K+ P T + L
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513
Query: 368 LEGLKKNNQPCKANTIMALVQRR---VPHFSSNQL 399
++G + + +A ++ ++RR H S N L
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G K A D +M G + T + + + VL+ +K ++ ++ +
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ-GVSP 470
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ FN ++ C G +++A++++ EM + V PD +T+ TL+ ++ + E L
Sbjct: 471 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+ ++N I + A ++ M G P +TYN +IK C++
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
D+A+++ M+ + + P+ Y ++I
Sbjct: 591 QEGDLAEELLKEMVNKGISPDDSTYLSLIE 620
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 106 QKSLPQGRREGFIMRIMMLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+K L QG IM M+ G G ++ A +M +++V L +
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD----RKSVPPDEVTFNTLMQG 516
Query: 164 R--DLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
R + K +A L++ ++ I+ D S+N +I + G + A+ V EM +G P
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
++TY LI K+ ++ L MV KG P+ +T+ I+ + N
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 624
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 141/337 (41%), Gaps = 41/337 (12%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
LK +DP F + + + V L ARRFD I LLE + G
Sbjct: 351 LKQLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQM--VKDGC 408
Query: 114 REGFIM--RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
+ + R++ YG A +K A++ F +M GC+
Sbjct: 409 QPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEP----------------------- 445
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
D ++ +I + G +D A + MQ+ G+ PD TY+ +I+
Sbjct: 446 -------------DRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCL 492
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
K + L+ MV GC PNL T+N+ I R A KL MQ G +PD+
Sbjct: 493 GKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDK 552
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
VTY++V++ G+L+ A+ V+ M + +P+ +Y ++ + G+ A +
Sbjct: 553 VTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA 612
Query: 352 SMKKNWVPSVDTISALLEG-LKKNNQPCKANTIMALV 387
+ +P+V T ++LL L+ + P N + ++V
Sbjct: 613 MLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMV 649
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ GKAG + A F +M +GC + + N + + ++R+ + ++ +
Sbjct: 488 IINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDM-QNA 546
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
Q D +++IV++A G L++A V VEMQ+ PD Y L+ + K E
Sbjct: 547 GFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKA 606
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ + M+ G PN+ T N + + R A L+ M G+ P TY L++
Sbjct: 607 SEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLS 665
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
A ++L + +D F + + + D ++ ++ D ++ +M K
Sbjct: 347 ANQILKQLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKD 406
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G +P+V+TY LI + N + ++N M GC P+ T+ I A
Sbjct: 407 GCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVA 466
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+ MQ G+ PD TY+++I ++G+L A ++ M+ +PN Y MI
Sbjct: 467 MSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIAL 526
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ ++ +A + D + P T S ++E L +A ++ +Q++
Sbjct: 527 QAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQK 581
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 115/224 (51%), Gaps = 3/224 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KAIQ +ME+ EK H + D+F++N VI FC+ +D A V+ M+K G +PDV+TY
Sbjct: 130 KAIQ--VMEILEK-HGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNI 186
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI F R ++ + + ++ C P + T+ + I+ + + +A KL+ M G
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ PD TYN+V+ G C+ G LD A + S + + Y ++ L EG +
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ D + K P+ T S L+ L ++ + +A ++ +++ +
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEK 350
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 160/361 (44%), Gaps = 46/361 (12%)
Query: 65 QLFKANAHNRIVIENKYAFEDT-----VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM 119
Q F+ N + Y F DT ++R + ++D + L+H + +G + I+
Sbjct: 57 QQFRVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHM--VNRGYKPDVIL 114
Query: 120 RIMMLYGKAGM--IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
++ G M I+ A+ + +G K V + NA + ++ + L +
Sbjct: 115 CTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRM- 172
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+K + D+ ++NI+I FC G LD A VM ++ K KP VITYT LI A
Sbjct: 173 KKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGI 232
Query: 238 E---------IGNGL------WNLMV---CK-----------------GCFPNLATFNVR 262
+ + GL +N++V CK GC ++T+N+
Sbjct: 233 DEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNIL 292
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ L+N+ + KLM M G EP+ +TY+ +I CR G +D AK V M + L
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKAL 352
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P+ Y +I LC+EG +LA D + +P + + +++L L KN +A
Sbjct: 353 APDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALN 412
Query: 383 I 383
I
Sbjct: 413 I 413
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI S+N ++ + C+ G D+A + ++ ++G P+ +Y TL A + G+
Sbjct: 390 DILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMI 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCR 303
M+ G P+ T+N I L QA +L+ + + +P ++YN V+ G C+
Sbjct: 450 LEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCK 509
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+ A +V +AM+ +PN Y +I
Sbjct: 510 VQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ 540
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F + GC S N L S D ++E+ I D
Sbjct: 403 KNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN-GIDPDE 461
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I C G++D+A ++V+M + +P VI+Y T++ K R +
Sbjct: 462 ITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLA 521
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
MV +GC PN T+ + IQ + + A +L L+
Sbjct: 522 AMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLL 558
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-NGLWNL 246
S+N + A G +A +++EM G+ PD ITY +LIS +D + L ++
Sbjct: 428 SYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDM 487
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ C P + ++N + L +R A +++ M G P+E TY L+I+G +G
Sbjct: 488 FESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-REG 116
+DP L ++ + + + + +++ A+ FD IE ++ K + R E
Sbjct: 73 KDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQAKMFDEIEEVMSTIKLEKRCRFSED 132
Query: 117 FIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
F +M +YG AG I A++ + M +GC + KS N L +L ++ I +
Sbjct: 133 FFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVS 192
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGIL--------------------------------- 202
P K ++ D NI+IK CE G L
Sbjct: 193 AP-KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKG 251
Query: 203 --DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++A+ ++ M+K ++PD IT+ LIS K R E G L M KGC PN T+
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQ 311
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L++K+R+ +A ++M M +G+ P ++Y ++ G C + + V M+
Sbjct: 312 EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVAEMDWVLRKMVNH 371
Query: 321 RLMPNRKIY 329
+P ++
Sbjct: 372 GFVPKTGMW 380
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC+P+ +FN + LV+ + + +K+ + G+E D N++IKG C SG+L+ A
Sbjct: 162 GCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ ++ PN + +I C +G F A+ + + K+ P T + L+ G
Sbjct: 222 LQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 371 LKKNNQ 376
L+K +
Sbjct: 282 LRKKGR 287
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F + G +R +++N L L + R ++ A + F+M P HI D ++FNI + +
Sbjct: 179 FDQLEDLGLERNTETMNVLLDALCKERKVELAREVFVMLSP---HIAPDAYTFNIFVHGW 235
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C + +D+A + EM+ G P VITYT ++ A+ K + + M +GC PN+
Sbjct: 236 CSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNV 295
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+ + + L R +A + M+ G +PD + YN +I R+GHL A +V+
Sbjct: 296 ITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRV 355
Query: 317 MLGRRLMP-NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ R ++P N Y TMI LCQ G + A + K+ ++ P + T LL
Sbjct: 356 EMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLL 408
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R F + +L+ S QG I M++ K + A+ M GCK
Sbjct: 274 RNFRRVYEILDSMSS--QGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTL 331
Query: 152 SLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
NA + +L + L +A Q F +E+P + ++ ++N +I C+ G D A V+
Sbjct: 332 FYNALINLLGRAGHLFEANQVFRVEMPRNV-VPRNVATYNTMISILCQYGRDDDALDVLK 390
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
EM+ KPD+ TY L+ + R + G I HL+++
Sbjct: 391 EMEAQSCKPDLQTYQPLLRLLFG-RRGQTGA---------------------IHHLLSEL 428
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R R G+ D TY L+I G CR G D A ++Y M+G ++P K +
Sbjct: 429 RD-----------RNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKTCE 477
Query: 331 TMI 333
++
Sbjct: 478 LLL 480
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
L+ +++ LG++ + T L+ A K+ + E+ ++ +M+ P+ TFN+ +
Sbjct: 177 LLFDQLEDLGLERNTETMNVLLDALCKERKVELAREVF-VMLSPHIAPDAYTFNIFVHGW 235
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ RR +A + M+ G P +TY V++ +C+ + ++ +M + PN
Sbjct: 236 CSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNV 295
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTI 383
Y ++ L + F A + D MK + P +AL+ L + +AN +
Sbjct: 296 ITYTMIMTSLTKCERFEEA-LSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQV 352
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 30/321 (9%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
+K E DP++ ++F A R N + + +LA +++F I+ +L HQ + +
Sbjct: 137 IKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVL-HQMTYETCK 195
Query: 114 -REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
EG + +M KH F + L+ +R V+ +A ++ E LKAI
Sbjct: 196 FHEGIFLNLM---------KH----FSKLSLH--ERVVEMFDAIXPIVREKPSLKAISTC 240
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAF 231
L + E Q I + N G +D A+ V+ EM+K V P++ITY+TLI+
Sbjct: 241 LNLLVESN--QSSITAKN---------GDIDSAFEVVEEMKKSHVSYPNLITYSTLINGL 289
Query: 232 YKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
R + L+ MV K P+ T+N I + + +A K+M M++ G P+
Sbjct: 290 CGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPN 349
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
Y+ ++ GFC+ G L+ AK+V+ M L P+ Y T+I++ C+ G + A + K
Sbjct: 350 VFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLK 409
Query: 351 DSMKKNWVPSVDTISALLEGL 371
D + T + +L GL
Sbjct: 410 DMXENKCRADTVTFNVILGGL 430
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 116/229 (50%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME +K ++F+++ ++ FC+ G L++A V EM+ LG+KPD + YTTLI+ F
Sbjct: 337 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 396
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ R + L M C + TFNV + L + R +A ++ + G+ ++
Sbjct: 397 RAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKA 456
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+Y +V+ CR G L A ++ MLGR ++P+ ++ +LC+ G A +
Sbjct: 457 SYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGL 516
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
++ + P ++ + L+E + + + A ++ + + P S+ +L+
Sbjct: 517 LELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQEPILSNQELTT 565
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ +TY+ +I G C SG L A +++ M+ + +++P+ Y +I+ C + A +
Sbjct: 277 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRA-L 335
Query: 348 MCKDSMKKNWV-PSVDTISALLEGLKKNNQ 376
+ MKKN P+V SAL+ G K +
Sbjct: 336 KIMEFMKKNGCNPNVFNYSALMNGFCKEGR 365
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 109 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKW 167
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 168 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGA 227
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 228 NELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 287
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 288 LCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGD 328
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M G PDV TY
Sbjct: 153 DIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTY 211
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN TF I R A ++ M
Sbjct: 212 SVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLS 271
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I C+EGD +
Sbjct: 272 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDT 331
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A ++
Sbjct: 332 AFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 371
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 13/274 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA------LKVLTESRDLKAIQ 170
F +M + K G I+ A F + +G + +V S N L L E LK+
Sbjct: 140 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 199
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
P D+++++++I C+ +D A + EM G+ P+ +T+TTLI
Sbjct: 200 LASGXXP-------DVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDG 252
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K+ R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD
Sbjct: 253 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPD 312
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ TY +I G C+ G LD A M+ + + Y +I LCQEG A M +
Sbjct: 313 KFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 372
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + P T + ++ K K + ++
Sbjct: 373 EMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLL 406
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I C+ G L +A+ ++ EM G+KPD TYTTLI K+ +
Sbjct: 277 DLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHR 336
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + + + I L + RS A K++ M G+ PD TY ++I FC+
Sbjct: 337 KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKK 396
Query: 305 GHLDMAKKVYSAM 317
G + K+ M
Sbjct: 397 GDVWKGSKLLKEM 409
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++N +I C+ G L A + +EM GV+P T+T+LIS + KD + + L+N
Sbjct: 435 VYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYN 494
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G PN+ TF I L + + +A++L + I+P EVTYN++I+G+CR G
Sbjct: 495 KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDG 554
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A ++ M + L+P+ Y+ +I LC G + A D K+N + S
Sbjct: 555 KIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYS 614
Query: 366 ALLEG 370
ALL G
Sbjct: 615 ALLHG 619
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ ++ C+ G +D+A L+ MQ V P+ ITY + K+ + GL
Sbjct: 714 NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLH 773
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KG N T N+ I+ R +A K++ M GI PD VTY+ +I +CRS
Sbjct: 774 HAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRS 832
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G++ + K++ ML R L P+ Y +I+ C G+ + A+ + D +++ +P
Sbjct: 833 GNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
+ N + + ++ L D E LL SL R G I++ + ++G + A+
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAE-LLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
F M G TV + N+ + + DL A ++ +E+ K ++ +F +I
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK-GVEPTATTFTSLISG 479
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+C+ + KA+ + +M G+ P+V T+T LIS N+ + L++ +V + P
Sbjct: 480 YCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT 539
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
T+NV I+ + +A +L+ M + G+ PD TY +I G C +G + AK
Sbjct: 540 EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFID 599
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEG 340
+ + + N Y ++H CQEG
Sbjct: 600 DLHKQNVKLNEMCYSALLHGYCQEG 624
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 144/389 (37%), Gaps = 71/389 (18%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
+K F+L+ N I N Y F +S L + L + E
Sbjct: 487 QKAFKLYNKMIDNGIT-PNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV 545
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y + G I A + DMH G + + L + + + F+ ++ K
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL-HKQ 604
Query: 181 HIQFDIFSFNIVIKAFCEMG--------------------------ILDKA--------- 205
+++ + ++ ++ +C+ G ++D A
Sbjct: 605 NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTF 664
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ ++ +M G++PD + YT++I + K+ + W+LMV + CFPN+ T+ +
Sbjct: 665 FDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNG 724
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTY------------------------------- 294
L +A L MQ + P+ +TY
Sbjct: 725 LCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANT 784
Query: 295 ---NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
N++I+GFC+ G A KV S M + P+ Y T+I+ C+ G+ + +
Sbjct: 785 VTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDT 844
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + P + + L+ G N + KA
Sbjct: 845 MLNRGLEPDLVAYNLLIYGCCVNGELDKA 873
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
Y C V+S+ L ++ ++A ++ I ++N++I C+ +
Sbjct: 226 YTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLS--------IVTYNVLIHGLCKGDRVS 277
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V + G+ DV+TY TL+ F + + E G L + MV G P A + +
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + + A +L+ + RFG P+ YN +I C+ G LD A+ +YS M L
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397
Query: 324 PNRKIYQTMIHYLCQEGDFNLA 345
PN Y +I C+ G ++A
Sbjct: 398 PNGITYSILIDSFCRSGRLDVA 419
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+F ++F +N +I + C+ G LDKA L+ M + ++P+ ITY+ LI +F + R +
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLD 417
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ ++ F+ IQ GI YN +I
Sbjct: 418 VA---------------ISYFDRMIQD--------------------GIGETVYAYNSLI 442
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ ++ M + + P + ++I C++ A+ + +
Sbjct: 443 NGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT 502
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P+V T +AL+ GL N+ +A+ + LV+R++
Sbjct: 503 PNVYTFTALISGLCSTNKMAEASELFDELVERKI 536
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V++L+A L L + R + E ++ D ++ + V+++ CE+ +A +
Sbjct: 190 VRTLSALLNGLLKVRKFITVWELFDESVNA-GVRPDPYTCSAVVRSMCELKDFLRAKEKI 248
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M+ G ++TY LI K +R + + KG ++ T+ +
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRL 308
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++ +LM M G P E + ++ G + G +D A ++ + +PN +Y
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I+ LC+ GD + A ++ + N P+ T S L++ ++ +
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR 415
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 94/203 (46%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN++++ + + A +++ M + P+V T + L++ K + L++
Sbjct: 156 LGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDE 215
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
V G P+ T + ++ + + +A + + M+ G + VTYN++I G C+
Sbjct: 216 SVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDR 275
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +V ++ G+ L + Y T++ C+ F + + ++ + P+ +S
Sbjct: 276 VSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSG 335
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L++GL+K + A ++ V R
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGR 358
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 7/180 (3%)
Query: 216 GVKPDVITYTTLISAF--YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
GV+PD T + ++ + KD W M G ++ T+NV I L R
Sbjct: 220 GVRPDPYTCSAVVRSMCELKDFLRAKEKIRW--MEANGFDLSIVTYNVLIHGLCKGDRVS 277
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A ++ + G+ D VTY ++ GFCR + ++ M+ P ++
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI---MALVQRR 390
L ++G + AY + + +VP++ +AL+ L K KA + M+L+ R
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 16/322 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE----- 115
+K ++F + +VI + ++ L G+ R D I +H L +G E
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIA---DHFDKLCRGGIEPSGVS 218
Query: 116 --GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
GF++ + G+ + A+D + G + + S N LK L S D + + L
Sbjct: 219 AHGFVLDALFCKGE---VTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVASRL 273
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ +F +I FC+ G +D+A+ + M++ G++PD+I Y+TLI ++K
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+G+ L++ + KG ++ F+ I V A+ + M GI P+ VT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++IKG C+ G + A +Y +L R + P+ Y ++I C+ G+ + + +D +
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 354 KKNWVPSVDTISALLEGLKKNN 375
K + P V L++GL K
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQG 475
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI------SAFYKDN 235
I+ ++ FN +I +C + D+A V M G+KPDV T+TT++ AF K
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+P IG L++LM ++A NV I L R A+K + +EPD VTYN
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G+C LD A++++ + PN +IH LC+ D + A M +K
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 356 NWVPSVDTISALLEGLKKN 374
P+ T L++ K+
Sbjct: 672 GSKPNAVTYGCLMDWFSKS 690
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I +C + LD+A + ++ P+ +T T LI K+N + ++
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++M KG PN T+ + + KL MQ GI P V+Y+++I G C+
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +D A ++ + +L+P+ Y +I C+ G
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAGM+ F G K V ++ + V +S DL + + I
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISP 389
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I+IK C+ G + +A+ + ++ K G++P ++TY++LI F K G L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P++ + V + L + A + M I + V +N +I G+CR
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
D A KV+ M + P+ + T++ E F
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ E+ + L +L++ G PN+ TF I + +A L +M++ GIEPD + Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I G+ ++G L M K++S L + + + ++ + I + GD A ++ K +
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T + L++GL ++ + +A + + +R
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 5/253 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKV-LTESRDLK----AIQAFLMEVPEKFHIQFDIF 187
A+ F M +YG K V + ++V + E K I L ++ ++ I DI
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIA 573
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
N+VI + ++ A + + ++PD++TY T+I + R + ++ L+
Sbjct: 574 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
PN T + I L A ++ +M G +P+ VTY ++ F +S +
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ + K++ M + + P+ Y +I LC+ G + A + ++ +P V + L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 368 LEGLKKNNQPCKA 380
+ G K + +A
Sbjct: 754 IRGYCKVGRLVEA 766
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ I+I C+ +D A + M + G KP+ +TY L+ F K E L+ M
Sbjct: 644 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P++ ++++ I L + R +A + + PD V Y ++I+G+C+ G L
Sbjct: 704 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 763
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
A +Y ML + P+ + + + Y
Sbjct: 764 VEAALLYEHMLRNGVKPDDLLQRALSEY 791
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
RR D E + E K P G + ++ + K + A+ F M G K +
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
+ ++S D++ E+ EK I I S++I+I C+ G +D+A + +
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+ PDV+ Y LI + K R L+ M+ G P+
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 197 CEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAFYKDNRPEIGNGLWNL--------- 246
C G++DKA + V +LGV P Y L S D I + L
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 247 ----------MVCKGCFPNLATFNVRIQH------LVNKRRSWQ---------ANKLMGL 281
+ CKG F+ + +V+ + + A++L+ L
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ G P+ VT+ +I GFC+ G +D A ++ M R + P+ Y T+I + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + ++ K V S+ ++ K+ A+ +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 110 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKW 168
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 169 GLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDA 228
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D A ++Y ML + L+P+ Y T+I+
Sbjct: 229 NELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYG 288
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 289 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 329
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 13/279 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA------LKVLTESRDLKAIQ 170
F +M + K G I+ A F + +G + +V S N L L E LK+
Sbjct: 141 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAM 200
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+P D+++++++I C+ +D A + EM G+ P+ +T+TTLI
Sbjct: 201 LASGVLP-------DVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 253
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K+ R + ++ M+ + P+L T+N I L K QA+ L+ M G++PD
Sbjct: 254 HCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 313
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ TY +I G C+ G LD A + M+ + + Y +I LCQEG A M +
Sbjct: 314 KFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLR 373
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P T + ++ K K + ++ +QR
Sbjct: 374 EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 412
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 256 KNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 314
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + Y LIS ++ R +
Sbjct: 315 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLRE 374
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 375 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A++ D+ +GCK + LK L S K ++ E+ D +
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASN-KCAPDEVT 304
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN ++ + C+ G++D+A V+ M + G PD++TY++++ R + L + +
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P+ + ++ L + + A +LM M PDEVT+N VI C+ G +D
Sbjct: 365 SYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVD 424
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A KV M P+ Y ++I LC E + A + + P + T + LL
Sbjct: 425 RAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLL 484
Query: 369 EGL 371
+GL
Sbjct: 485 KGL 487
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN +I+A C G + A V +M G P V+TY+ L+ A K + L
Sbjct: 161 DTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLL 220
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KGC P++ T+NV I + N+ +A ++ + G +PD VTY V+K C S
Sbjct: 221 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGS 280
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+++++ M + P+ + T++ LCQ+G + A + + +P + T
Sbjct: 281 ERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTY 340
Query: 365 SALLEGL 371
S++L+GL
Sbjct: 341 SSILDGL 347
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 14/315 (4%)
Query: 32 LNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLA 91
L+ P+ D P L L +++ +LF A N+ ++ F V+ L
Sbjct: 255 LSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA-PDEVTFNTIVTSLC 313
Query: 92 GA----RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYG 145
R ++H+ EH G + +L G G + A++ + YG
Sbjct: 314 QQGLVDRAIKVVDHMSEH------GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
CK + LK L + + + E+ D +FN VI + C+ G++D+A
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCS-DCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V+ +M + G PD++TY ++I + + L + + GC P++ TFN ++
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + R A +LM M PD T+N VI C+ G L A + M +PN
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546
Query: 326 RKIYQTMIHYLCQEG 340
+ Y ++ L + G
Sbjct: 547 QSTYNIVVDALLKAG 561
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 141/317 (44%), Gaps = 3/317 (0%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ + + L G+ R+ +E L S E I+ + G++ A+
Sbjct: 266 DAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVV 325
Query: 139 YDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
M +GC + + ++ L L + R A++ L+ + + + D ++ V+K C
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE--LLSRLKSYGCKPDTIAYTTVLKGLC 383
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ + A +M EM PD +T+ T+I++ + + + M GC P++
Sbjct: 384 SIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIV 443
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N I L N+R A +L+ +Q +G +PD VT+N ++KG C + A+++ M
Sbjct: 444 TYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNM 503
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ P+ + T+I LCQ+G A K + +P+ T + +++ L K +
Sbjct: 504 MHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKT 563
Query: 378 CKANTIMALVQRRVPHF 394
+A +++ + P
Sbjct: 564 QEALKLLSGMTNGTPDL 580
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 24/302 (7%)
Query: 59 DPEKLFQLFKANA----HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
D E++F A+A +N +V N Y R+ ARR L+ P
Sbjct: 116 DAERVFATLGASATVVTYNTMV--NGYC---RAGRIEDARR------LISGMPFPPDTFT 164
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
++R + + G+ + A+ F DM GC +V + + L ++ + L
Sbjct: 165 FNPLIRALCVRGR---VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLD 221
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ K + DI ++N++I A C G +D+A ++ ++ G KPD +TYT ++ +
Sbjct: 222 EMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGS 280
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R + L+ M C P+ TFN + L + +A K++ M G PD VTY
Sbjct: 281 ERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTY 340
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-----QEGDFNLAYIMC 349
+ ++ G C G +D A ++ S + P+ Y T++ LC + + +A ++C
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400
Query: 350 KD 351
D
Sbjct: 401 SD 402
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ A+ + L ++++ E L+ E ++ + G++ A+
Sbjct: 371 DTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVV 430
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M GC + + N+ + L R + L + + + + DI +FN ++K C
Sbjct: 431 EQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL-QSYGCKPDIVTFNTLLKGLCS 489
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+ + A +MV M PD T+ T+I++ + +M GC PN +T
Sbjct: 490 VDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQST 549
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N+ + L+ ++ +A KL+ M PD +TYN VI ++G ++ A + M+
Sbjct: 550 YNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMV 607
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
L P+ Y+++ + +C+E + A M
Sbjct: 608 SNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I AM+ ++ YGCK + + N LK L + + ++ + D +FN
Sbjct: 458 IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS-DCPPDATTFN 516
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
VI + C+ G+L +A + M + G P+ TY ++ A K + + L + M
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT-N 575
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+L T+N I ++ + +A L+ +M G+ PD +TY + G CR D A
Sbjct: 576 G-TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRA 634
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + L P+ Y ++ CQ ++A + +P T LLE
Sbjct: 635 IRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEA 694
Query: 371 L 371
L
Sbjct: 695 L 695
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ NI+IK C G + A V LG V+TY T+++ + + R E L +
Sbjct: 98 VVPCNILIKRLCSGGRVADAERVFA---TLGASATVVTYNTMVNGYCRAGRIEDARRLIS 154
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M P+ TFN I+ L + R A + M G P VTY++++ C++
Sbjct: 155 GMPFP---PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M + P+ Y +I+ +C EGD + A + D P T +
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271
Query: 366 ALLEGL 371
+L+ L
Sbjct: 272 PVLKSL 277
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 49/103 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ + C D+A ++ +Q +G+ PD Y ++ F ++ R +I +
Sbjct: 614 DTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCF 673
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
MV GC P+ +T+ + ++ L + +A +L+ + G+
Sbjct: 674 AHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V ++ + + +++ + L+++ EK + DI ++N++I FC+ G + +A
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREA 194
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG--CFPNLATFNVRI 263
Y ++ + +G P+ +TYTTLI F K L+ ++ + PN+ TFN I
Sbjct: 195 YEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALI 254
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R A +L+ M+ + D TY ++ G C+ G +V+ ML
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
P+ Y T++H C+ G A + + + K P V T + LLEGL +N +
Sbjct: 315 PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGK 367
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ KAG ++ A + + GC + + +S +L +A+Q F + H +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ +FN +I C+ L+ A+ ++ +M+ ++ D TYTTL+ K R + +
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ +GC P++ T+ + A +++ M GI PD TY ++++G
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G + A + + +L R P +Y ++ C+ + A + + + P T
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424
Query: 364 ISALLEGLKKNNQ 376
L+E L K +
Sbjct: 425 CKLLVEMLCKRGR 437
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 16/305 (5%)
Query: 79 NKYAFEDTVSRLAGARRF----DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHA 134
N++ F ++ L A R + +LE +P R ++ + +AG + A
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERH-CVPNLRDINLLLASLC---QAGTMDQA 57
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
M F + C +V +LN + E + L E+ + F + + ++ +IK
Sbjct: 58 MAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGLWNLMVCKGCF 253
+C+M LD+A ++ E DVI T++ F K R E L +++ K
Sbjct: 115 CYCKMDRLDQARQLLEESS--CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ +NV I R +A +++ + G P+ VTY +I GFC+SG+L A ++
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232
Query: 314 YSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + R PN + +I LC+ A+ + K ++ T + L++GL
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 372 KKNNQ 376
K +
Sbjct: 293 CKQGR 297
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A++ + M C ++ +N L L ++ + QA M + +
Sbjct: 15 KAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMD--QA--MAIFRGIQCSPSV 70
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ NI+I FCE+ +LDKA + EM+K + P+ TYT +I + K +R +
Sbjct: 71 ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLD------- 123
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
QA +L L + D + V +GFC++
Sbjct: 124 ----------------------------QARQL--LEESSCCSSDVIAITSVARGFCKAQ 153
Query: 306 HLDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ M+ ++ P+ + +IH C+ G AY M + + VP+ T
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTY 213
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+ L++G K+ +A + ++ R H N ++ F +++S
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT-FNALIS 255
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++ A C+ G L A V+ M G+ PDV TYT L+ +++ + +
Sbjct: 317 VVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFE 376
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ + C P ++ ++ +A K M + PD T L+++ C+ G
Sbjct: 377 KILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436
Query: 306 HLD 308
D
Sbjct: 437 RTD 439
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ T++++I G C++G L A + Y+ ML R +PN + ++ LCQ G + A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 349 CKDSMKKNWVPSVDTISALLEG 370
+ PSV T++ L+ G
Sbjct: 61 FRGI---QCSPSVITLNILING 79
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ LM + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ LM+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFY 232
DI+ F+ +I A+ E G L A + + K V D + Y L+ FY
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+++ + C G +L FN+ + V + A + + ++ + P V
Sbjct: 125 EES-----------LEC-GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVV 172
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
++N ++ G+ + G LD ++ +AM + P+ Y +I+ LC+E + A + +
Sbjct: 173 SFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 232
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ VP+ T + L++G KN +
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGR 256
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 146/303 (48%), Gaps = 9/303 (2%)
Query: 86 TVSRLAGARRFDYIEHL-LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
+V + + R F+ E L L H S P R + I+ + GKA A++ F
Sbjct: 196 SVGQESWHRAFEVYEWLNLRHWYS-PNAR---MLSTILAVLGKANQEPLAVEVFTRAEP- 250
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL-- 202
+ TVK NA + V S +Q L ++ + + D+ SFN +I A + G +
Sbjct: 251 SVENTVKVYNAMMGVYARSGKFNKVQE-LFDLMRERGCEPDLVSFNTLINARLKAGEMTP 309
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+ A ++ E+++ G++PD+ITY TLISA + + E +++ MV C P+L T+N
Sbjct: 310 NLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAM 369
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I S +A +L ++ G PD V+YN + F R G+++ K + M+
Sbjct: 370 ISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGF 429
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
+ Y TMIH ++G +LA + +D P V T + L++ L K N+ +A
Sbjct: 430 GKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAG 489
Query: 383 IMA 385
+M+
Sbjct: 490 MMS 492
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 1/216 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +YG+ G+ A F D+ G S N+ L +++ ++ E+ K
Sbjct: 369 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMV-KI 427
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D ++N +I + + G D A + +M+ G PDVITYT LI + K N+ E
Sbjct: 428 GFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEA 487
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
G+ + M+ G P L T++ I + +A + M R G PD++ Y++++
Sbjct: 488 AGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDI 547
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
R A Y M+ +MP +Y+ M+ L
Sbjct: 548 HLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTL 583
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A++ F DM + C+ + + NA + V L L E D
Sbjct: 340 RASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRC-GLSGKAEQLFNDLESRGFFPDA 398
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+N + AF G ++K + EM K+G D +TY T+I + K + ++ L+
Sbjct: 399 VSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRD 458
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P++ T+ V I L + +A +M M G++P TY+ +I G+ ++G
Sbjct: 459 MKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGK 518
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A++ + ML P++ Y M+
Sbjct: 519 PVEAEETFDCMLRSGTRPDQLAYSVML 545
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
+M ++ GK AM +M G K + N+ LK+ D + +
Sbjct: 925 VMAQLLCRGKQVRDVEAM--LSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIK 982
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E ++ D ++NI+I +C + ++M EM+ +G++P + TY +L+++F K
Sbjct: 983 ED-GLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLV 1041
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E L+ + GC + + +++ ++ N +A +L +M+ G+EP T +L+
Sbjct: 1042 EQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLL 1101
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ + SG A+KV S + + Y ++I + GD+N
Sbjct: 1102 MVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYN 1147
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 85/203 (41%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S N +++A G L++ Y+V+ E+Q +G K + ++ AF + +++
Sbjct: 850 VDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYH 909
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G FP++ + V Q L ++ ++ M+ G +PD +N V+K +
Sbjct: 910 GMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAID 969
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++Y + L P+ Y +I C++ ++ + P +DT
Sbjct: 970 DFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYK 1029
Query: 366 ALLEGLKKNNQPCKANTIMALVQ 388
+L+ K +A + +Q
Sbjct: 1030 SLVASFGKQQLVEQAEELFEELQ 1052
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A F DM G K + + L ++ +L L+++ E + S
Sbjct: 724 LFTEASQVFSDMRFCGIKAS-ECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISV 782
Query: 190 NI-VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ VI+A+ + + KA V M++ + + + LI A+ E ++N M+
Sbjct: 783 YVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMM 842
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P + + N +Q L+ R + ++ +Q G + + + L++ F R+G++
Sbjct: 843 KDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIF 902
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
KK+Y M P+ +Y+ M LC+
Sbjct: 903 EVKKIYHGMKAAGYFPSMHLYRVMAQLLCR 932
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 118/282 (41%), Gaps = 42/282 (14%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
I+ ++ + +AG I ++ M G ++ ++L + ++ ++A L E+
Sbjct: 888 ILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEM- 946
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ + D+ +N V+K + + K + +++ G++PD TY LI + +D+RP
Sbjct: 947 EEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRP 1006
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ + LV LM M+ G+EP TY +
Sbjct: 1007 K-------------------------EGLV----------LMDEMRTVGLEPKLDTYKSL 1031
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA---YIMCKDSMK 354
+ F + ++ A++++ + +R Y M+ G + A + M KD
Sbjct: 1032 VASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKD--- 1088
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
+ P++ T+ L+ + QP +A +++ ++ + S+
Sbjct: 1089 EGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLST 1130
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 52/227 (22%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
CK + L+ ALK + SR+L +F M F +I+ E + +A
Sbjct: 685 CK--AQQLDTALKEYSNSRELGFTGSFTM--------------FEALIQCCLENELFTEA 728
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V +M+ G+K Y +++ + K PE + L +L G N + V +
Sbjct: 729 SQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVIE 788
Query: 266 LVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + WQ A + G M++ I + +N +I+ + SG + A
Sbjct: 789 AYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERA-------------- 834
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R ++ TM MK P+VD+I+ LL+ L
Sbjct: 835 -RAVFNTM--------------------MKDGPSPTVDSINGLLQAL 860
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/161 (16%), Positives = 71/161 (44%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
LM+ ++ + ++ ++ +F + ++++A + E+Q G K D Y ++ +
Sbjct: 1012 LMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYR 1071
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
L+++M +G P +AT ++ + + + +A K++ ++ +
Sbjct: 1072 NSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTL 1131
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
Y+ VI + R+G + + + L P+ +I+ I
Sbjct: 1132 PYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFI 1172
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P ++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + A++L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + D +K P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KITYTTLIDGCCKEGD 332
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 13/279 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA------LKVLTESRDLKAIQ 170
F +M + K G I+ A F + +G + + S N L VL E LK+
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKS-- 201
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A L +Q D+++++++I + +D A + EM G+ P+ +T+TTLI
Sbjct: 202 AMLAS-----GVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K+ R ++ ++ M+ + P+L T+N I L K QA+ L+ M R G++PD
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 316
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
++TY +I G C+ G LD A + M+ + + +Y +I LCQEG A M +
Sbjct: 317 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 376
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P T + ++ K K + ++ +QR
Sbjct: 377 EMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + ++ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 181/415 (43%), Gaps = 72/415 (17%)
Query: 53 KLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
+L+ E FK+ A++ + FE + +LA + D +++LL+ K
Sbjct: 49 RLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH 108
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
E + ++ +Y + G+ + A++ FY + +GC +VK N L L ++ I
Sbjct: 109 CSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA-- 230
++ ++ + ++F++N+++KA C+ +D A ++VEM G PD ++YTT+IS+
Sbjct: 169 YRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 231 ---FYKDNRP---------EIGNGLWN----------------LMVCKGCFPNLATFNVR 262
K+ R + N L N MV KG PN+ +++
Sbjct: 228 EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 263 IQHLVN-----------------------------------KRRSWQANKLMGLMQR-FG 286
I L N + ++ A L M R FG
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
++P+ V YN +++GFC G++ A V+S M PN + Y ++I+ + G + A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR-----VPHFSS 396
+ + P+V + ++E L ++++ +A +++ ++ + VP F++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+G I+ A M GC + +L++ +K A+ + ++ F +Q ++
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW-NQMIRGFGLQPNV 352
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +++ FC G + KA V M+++G P++ TY +LI+ F K + +WN
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC PN+ + ++ L + +A L+ +M + P T+N IKG C +G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 307 LDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A+KV+ M + R PN Y ++ L + AY + ++ + S T +
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 366 ALLEG 370
LL G
Sbjct: 533 TLLHG 537
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 4/247 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A+ + M GC V ++ L K ++ L+E+ K +
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES-LIEIMSKENCAP 455
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +FN IK C+ G LD A V +M Q+ P+++TY L+ K NR E GL
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ +G + +T+N + N A +L+G M G PDE+T N++I +C+
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 304 SGHLDMAKKVYSAM-LGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G + A ++ + GRR P+ Y +I LC+ I+ + + VPS+
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 362 DTISALL 368
T S L+
Sbjct: 636 ATWSVLI 642
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVP-EKFHIQFDIFSFNIVIKAFCEMGILDKA 205
K T + ++ L + ++Q L ++ + FH D+F VI + ++G+ ++A
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERA 130
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +++ G P V Y ++ +NR ++ ++ M G PN+ T+NV ++
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A KL+ M G PD V+Y VI C G + ++ L R P
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPV 245
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+Y +I+ LC+E D+ A+ + ++ ++K P+V + S L+ L + Q A + +
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 386 LVQRRVPHFSSNQLSAF 402
+ +R H + LS+
Sbjct: 306 QMLKRGCHPNIYTLSSL 322
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 99 IEHLLE----------HQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
IEHL++ +++SL G F +M + K G I A F + +G
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGL 167
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ +V S N + + DL + F L V + +Q D+++++++I C+ +D A
Sbjct: 168 RPSVVSFNTLMNGYIKIGDLD--EGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ EM G+ P+ +T+TTLI K+ R ++ ++ M+ + P+L T+N I
Sbjct: 226 NALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K QA L+ M G++PD++TY +I G C+ G L+ A + M+ + +
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
Y +I LCQEG A M ++ + P + T + ++ K + ++
Sbjct: 346 DVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405
Query: 386 LVQR 389
+QR
Sbjct: 406 EMQR 409
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P+ VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFY 232
DI+ F+ +I A+ E G L A + + K V D + Y L+ FY
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+++ + C G +L FN+ + + A + + ++G+ P V
Sbjct: 125 EES-----------LEC-GYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVV 172
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
++N ++ G+ + G LD ++ S M + P+ Y +I+ LC+E + A + +
Sbjct: 173 SFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEM 232
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ VP+ T + L++G KN +
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGR 256
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V ++ + + +++ + L+++ EK + DI ++N++I FC+ G + +A
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREA 194
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG--CFPNLATFNVRI 263
Y ++ + +G P+ +TYTTLI F K L+ ++ + PN+ TFN I
Sbjct: 195 YEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALI 254
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R A +L+ M+ + D TY ++ G C+ G +V+ ML
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
P+ Y T++H C+ G A + + + K P V T + LLEGL +N +
Sbjct: 315 PSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGK 367
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ KAG ++ A + + GC + + +S +L +A+Q F + H +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ +FN +I C+ L+ A+ ++ +M+ ++ D TYTTL+ K R + +
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ +GC P++ T+ + A +++ M GI PD TY ++++G
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G + A + + +L R P +Y ++ C+ + A + + + P T
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424
Query: 364 ISALLEGLKKNNQ 376
L+E L K +
Sbjct: 425 CKLLVEMLCKRGR 437
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 16/305 (5%)
Query: 79 NKYAFEDTVSRLAGARRF----DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHA 134
N++ F ++ L A R + +LE +P R ++ + +AG + A
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERH-CVPNLRDINLLLASLC---QAGKMDQA 57
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
M F + C +V +LN + E + L E+ + F + + ++ +IK
Sbjct: 58 MAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGLWNLMVCKGCF 253
+C+M LD+A ++ E DVI T++ F K R E L +++ K
Sbjct: 115 CYCKMDRLDQARQLLEESS--CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ +NV I R +A +++ + G P+ VTY +I GFC+SG+L A ++
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232
Query: 314 YSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + R PN + +I LC+ A+ + K ++ T + L++GL
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 372 KKNNQ 376
K +
Sbjct: 293 CKQGR 297
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A++ + M C ++ +N L L ++ + QA M + +
Sbjct: 15 KAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMD--QA--MAIFRGIQCSPSV 70
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ NI+I FCE+ +LDKA + EM+K + P+ TYT +I + K +R +
Sbjct: 71 ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLD------- 123
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
QA +L L + D + V +GFC++
Sbjct: 124 ----------------------------QARQL--LEESSCCSSDVIAITSVARGFCKAQ 153
Query: 306 HLDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ M+ ++ P+ + +IH C+ G AY M + + VP+ T
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTY 213
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+ L++G K+ +A + ++ R H N ++ F +++S
Sbjct: 214 TTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT-FNALIS 255
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++ A C+ G L A V+ M G+ PDV TYT L+ +++ + +
Sbjct: 317 VVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFE 376
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ + C P ++ ++ +A K M + PD T L+++ C+ G
Sbjct: 377 KILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436
Query: 306 HLD 308
D
Sbjct: 437 RTD 439
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ T++++I G C++G L A + Y+ ML R +PN + ++ LCQ G + A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 349 CKDSMKKNWVPSVDTISALLEG 370
+ PSV T++ L+ G
Sbjct: 61 FRGI---QCSPSVITLNILING 79
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ A L E HI +D +I FC++G +D A V + M K G P V TYT+LI
Sbjct: 467 LDAMLSNGCEPNHIIYDA-----LIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLI 521
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
A +KD R ++ + + MV C PN+ T+ I L +A KL+ +M+ G
Sbjct: 522 DAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCS 581
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ VTY +I G +SG +D++ +++ M + PN Y+ +I++ C G + A+ +
Sbjct: 582 PNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSL 641
Query: 349 CKDSMKKNWVPSVDTISALLEGLKK 373
+ + W + ++++G K
Sbjct: 642 LSEMKQTYWPKYLQGYCSVVQGFSK 666
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI CE ++KA+L+ EM+ +GV PDV TYT LI +F K E +
Sbjct: 287 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWF 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC N+ T+ + + ++ QA+ + M G P+ +TY+ ++ G C++
Sbjct: 347 DEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKA 406
Query: 305 GHLDMAKKVYSAMLGR----------------RLMPNRKIYQTMIHYLCQ 338
G + A +VY+ ++G + PN Y +I LC+
Sbjct: 407 GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCK 456
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 139/343 (40%), Gaps = 41/343 (11%)
Query: 72 HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAG 129
H + N + + L A + + LL+ L G I+ ++ G K G
Sbjct: 436 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAM--LSNGCEPNHIIYDALIDGFCKVG 493
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
I +A + F M G TV + + + + + R L L ++ E ++ ++
Sbjct: 494 KIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES-SCTPNVVTY 552
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I C +G KA ++ M++ G P+V+TYT LI K + ++ L+ M
Sbjct: 553 TAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLM------------------------------ 279
KGC PN T+ V I H +A+ L+
Sbjct: 613 KGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASL 672
Query: 280 GLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM--LGRRL-MPNRKIYQTMI 333
GL++ G P Y L+I F ++G L+ A +++ M L L + ++ +Y ++I
Sbjct: 673 GLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLI 732
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC A+ + + +K VP + L++GL K N+
Sbjct: 733 QALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNK 775
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ + D +I E + D+A + M+ P+V+TY TL++ F K +
Sbjct: 99 EREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQL 158
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ N+M+ +GC PN + FN + N R A KL+ M G P V YN+
Sbjct: 159 GWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218
Query: 298 IKGFCRSGH------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
I C L +A+KVY ML + N+ LC G F++A+ + K
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278
Query: 352 SMKKNWVPSVDTISALL 368
M K +VP T S ++
Sbjct: 279 MMGKGFVPDTSTYSKVI 295
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 29/274 (10%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG+I+ A F +M GC V + A L LKA Q L + + F+
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAY-----LKAKQ--LPQASDIFNRMI 385
Query: 185 D------IFSFNIVIKAFCEMGILDKAYLVMVEM----QKLG------------VKPDVI 222
D +++ ++ C+ G + KA V ++ +G + P+V+
Sbjct: 386 DAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVV 445
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TY LI K ++ L + M+ GC PN ++ I + A ++ M
Sbjct: 446 TYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM 505
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G P TY +I + LD+A KV S M+ PN Y MI LC+ G+
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGEC 565
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + +K P+V T +AL++GL K+ +
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ C MG D A+ ++ M G PD TY+ +I+ + + E L+ M G
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ T+ + I QA M+ G + VTY ++ + ++ L A +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA------YIMCKDSMKKNW---------- 357
++ M+ PN Y ++ LC+ G+ A I D++ ++
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIM 384
P+V T AL++GL K ++ A ++
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELL 467
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A++ F +M G + V + ++ + L L ++ E+ I ++ +FN +I
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALI 337
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K CF
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ T+N I +R + +L M + G+ + VTY +I GF ++ D A+ V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ + PN Y T++ LC+ G A ++ + + P++ T + ++EG+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM-- 515
Query: 374 NNQPCKANTI 383
CKA +
Sbjct: 516 ----CKAGKV 521
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ + + + L + D+ AF L+ E I+ ++ ++ VI + C+ D
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDL--AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + EM+ GV+P+VITY++LIS R + L + M+ + PN+ TFN I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN Y T+I+ C+ + + ++ ++ V + T + L+ G
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I +++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G +D+A + + M ++ N IY T+I LC+ + A + +
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + A L+ M+ IE + V Y+ VI C+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H D A +++ M + + PN Y ++I LC ++ A + D +++ P+V T +
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 366 ALLEGLKKNNQPCKA 380
AL++ K + +A
Sbjct: 335 ALIDAFVKEGKLVEA 349
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +V+ C+ G +D A+ ++ +M+ ++ +V+ Y+T+I + K +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I P+ VT+N +I F
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L+ G CKA I
Sbjct: 402 TYNTLINGF------CKAKRI 416
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I FC+ +D+ + EM + G+ + +TYTTLI F++ + ++
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +QR +EP TYN++I+G C++
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ ++ ++ + + P+ IY TMI C++G
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF FN ++ A +M D + +MQ+LG+ ++ TY LI+ F + ++ + L
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T + + + +R A L+ M G PD +T+ +I G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
A + M+ R PN Y +++ LC+ GD +LA+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ-AFLMEVPEKFHIQ 183
+ KA I ++ F +M G + + ++RD Q F V + H
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP- 468
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+I ++N ++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L
Sbjct: 469 -NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + KG P++ +N I K +A+ L M+ G PD T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + M K P + + L+SA K + ++ L M G NL T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A L+G M + G EP VT + ++ G+C + A + M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + A + +++ P++ T ++ GL K
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ MV P++ FN + + ++ L MQR GI + TYN++I F
Sbjct: 71 GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR + +A + M+ P+ ++++ C + A + ++ + P
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
T + L+ GL +N KA+ +ALV R V L + +++
Sbjct: 191 ITFTTLIHGLFLHN---KASEAVALVDRMVQRGCQPNLVTYGVVVN 233
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 38/364 (10%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+ + DP+ ++ A +E+ + +L D ++ L+ +
Sbjct: 45 LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG 104
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDM--HLYGCKRTVKSLNAALKVLTESRDLKA 168
+ G + + Y + A+D + L+G + N L VL E +K
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+++ E+ + I+ D+ +FN ++KA C + A L++ EM GV PD T+TTL+
Sbjct: 165 LESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223
Query: 229 SAFYKDN-----------------------------------RPEIGNGLWNLMVCKGCF 253
F ++ R E G + G
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + L A K+M +M + G +PD TYN+V+ C++G L+ AK +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ R +P+ + T+I LC A + + K P V T + L+ L K
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 374 NNQP 377
P
Sbjct: 404 VGDP 407
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+LE S E +M + + G I+ A+ M GC T ++N +
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 162 E-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ R A+ E+ + F + D ++N + C+ + A VM M + G PD
Sbjct: 263 KLGRVEDALGYIQQEIADGF--EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY +++ K+ + E G+ N MV +GC P++ TFN I L R +A L
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G+ PD T+N++I C+ G +A +++ M P+ Y T+I LC G
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + KD S T + +++GL K
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ HA+ M G V + N + L ++ L+ + L ++ ++ + DI +FN
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFN 360
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A C L++A + ++ GV PDV T+ LI+A K P + L+ M
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P+ T+N I +L + + +A L+ M+ G +TYN +I G C+ ++ A
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 480
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++V+ M + + N + T+I LC++ + A+ + + + P+ T +++L
Sbjct: 481 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH 540
Query: 371 LKKNNQPCKANTIM 384
K KA I+
Sbjct: 541 YCKQGDIKKAADIL 554
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 6/279 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G A+ F +M GC + N + L L KA+ L++ E
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD--LLKDMESTGCPRS 460
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I C+ +++A V +M G+ + IT+ TLI KD + + L N
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G PN T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+A KV M + + P K Y ++ L + + A + ++ + P T
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Query: 366 ALLEGLKKNNQPCKA--NTIMALVQRR-VPHFSSNQLSA 401
+ GL + P K + ++ +V + +P FSS ++ A
Sbjct: 641 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D + + G V + N + L + D + L E + D ++N
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGD-PHLALRLFEEMKNSGCTPDEVTYN 430
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C +G L KA ++ +M+ G ITY T+I K R E +++ M +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N TFN I L ++ A +L+ M G++P+ +TYN ++ +C+ G + A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M + Y T+I+ LC+ G +A + + K P+ + +L+
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 371 L-KKNN 375
L ++NN
Sbjct: 611 LFRRNN 616
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 145 GCKRTVKSLNAALKVL-TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
G TV + N + L E R +A A + E+ EK + D F++NI+I +C+ G
Sbjct: 249 GVSMTVATYNLFVHTLFMEGRAAEA-HALVEEMGEK-GLAPDAFTYNILINGYCKEGKEK 306
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + M G++ V+TYT+LI A + + L+N V +G P+L +N I
Sbjct: 307 KAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALI 366
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+A ++MG M++ I PD+VTYN +++G C G LD A+ + M R +
Sbjct: 367 NSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQ 426
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y T+I +GD A + + M K + P++ T +A+++GL N Q A +
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDL 486
Query: 384 M 384
+
Sbjct: 487 V 487
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--- 181
Y K G K AM F M G + TV + + + L+ ++ + E F+
Sbjct: 299 YCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS-------MKGMVQETDRLFNDAV 351
Query: 182 ---IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
I+ D+F +N +I + C G +D+A+ +M EM+K + PD +TY TL+ R +
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD 411
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
GL M +G P+L ++N I K A K+ M G P +TYN +I
Sbjct: 412 EARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
KG C +G A+ + M+G + P+ Y ++I L E
Sbjct: 472 KGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYK 233
E+ E+ I D +++ VI +C++G ++ A V EM G V+P+ + Y LI +
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCD 231
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
E+ MV +G +AT+N+ + L + R+ +A+ L+ M G+ PD T
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFT 291
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
YN++I G+C+ G A K++ M+G+ + Y ++IH L +G + D++
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ P + +AL+ +A IM ++++
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKK 388
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
TFN+ ++HL + +A +L+ M P+ VTYN VI GFC G + ++ M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREM 173
Query: 318 LGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEG 370
R + P++ Y T+I C+ G A + + + + V P+ +AL+ G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGG 228
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
GM++ A F+ M+ + V+S N L L++S +F ++ + +F+
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVA-GLSPSVFT 253
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+VI G L+ A + EM+ G++PD++TY +LI + K ++ M
Sbjct: 254 YNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK 313
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P++ T+N I R QA + + M++ G++P+ VTY+ +I FC++G L
Sbjct: 314 DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLL 373
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A K + M+ L PN Y ++I C+ GD N A+ + + + ++ T +ALL
Sbjct: 374 EANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALL 433
Query: 369 EGLKKNNQ 376
+GL ++ +
Sbjct: 434 DGLCEDGR 441
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YGK GM+ A+ F +M GC+ V + N+ + + + +L + ++ +Q
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR-GLQP 354
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++ +I AFC+ G+L +A V+M ++G++P+ TYT+LI A K L
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G N+ T+ + L R +A +L G + + G ++ Y + G+ ++
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKA 474
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A + M + L P+ +Y T I LC++ + + + ++ M +
Sbjct: 475 KMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIY 534
Query: 365 SALLEGLKKNNQPCKANTIMALVQ 388
+ L++ K + +A ++ +Q
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQ 558
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L++ + I+ + ++ ++I C++G++ +A M + G++P+++ YT LI
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K++ E L+N M+ KG P+ + I + +A L M G+E D
Sbjct: 613 KNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC 672
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
Y +I GF R G + +AK + ML + ++P++ + ++ + GD N A + D
Sbjct: 673 AYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDM 732
Query: 353 MKKNWVP-SVD-TISALLEGLKKNNQPCKANT 382
++ + ++D T+ + L + K ++ C + +
Sbjct: 733 ARRGLISGTIDITVPSCLTAVTKLHKLCASQS 764
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 10/283 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES---RDLKAIQAFLMEVPEKFHIQ 183
K G + A +M G + + A L L E R+ + + L++ + Q
Sbjct: 403 KIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQ 462
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F+ IKA +++KA ++ EM K +KPD++ Y T I + N E +
Sbjct: 463 IYTSLFHGYIKA----KMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAV 518
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ G N + I ++ +A L+ MQ GI+ VTY ++I G C+
Sbjct: 519 IREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCK 578
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + A + + M L PN IY +I LC+ A + + + K P
Sbjct: 579 IGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLV 638
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
++L++G K+ P +A ++L R V L A+ S++
Sbjct: 639 YTSLIDGNMKHGNPGEA---LSLRNRMVEIGMELDLCAYTSLI 678
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+ + ++G+L++A +M K V P V + L+ K ++ + + MV
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T+N+ I L + A L M+ G+ PD VTYN +I G+ + G L
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A V+ M P+ Y ++I+ C+ A+ ++ P+V T S L+
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Query: 369 EGLKKNNQPCKAN 381
+ K +AN
Sbjct: 364 DAFCKAGMLLEAN 376
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
Query: 119 MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
M ++ L GKAG+ A+ F M YGCK + + + L++ R Q+F + +
Sbjct: 150 MEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD 209
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+F + D+ + ++ +C G + +A V EM+ G++P+V TY+ +I A + +
Sbjct: 210 RF--EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQIT 267
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ +++ M+ GC PN TFN ++ V R+ + ++ M+R G PD +TYN +I
Sbjct: 268 RAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLI 327
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
+ CR +L+ A K+ ++ + + N + + + + GD N A+ M
Sbjct: 328 ESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRM 376
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 38/364 (10%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+ + DP+ ++ A +E+ + +L D ++ L+ +
Sbjct: 45 LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG 104
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDM--HLYGCKRTVKSLNAALKVLTESRDLKA 168
+ G + + Y + A+D + L+G + N L VL E +K
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+++ E+ + I+ D+ +FN ++KA C + A L++ EM GV PD T+TTL+
Sbjct: 165 LESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223
Query: 229 SAFYKDN-----------------------------------RPEIGNGLWNLMVCKGCF 253
F ++ R E G + G
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + L A K+M +M + G +PD TYN+V+ C++G L+ AK +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ R +P+ + T+I LC A + + K P V T + L+ L K
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 374 NNQP 377
P
Sbjct: 404 VGDP 407
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+LE S E +M + + G I+ A+ M GC T ++N +
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 162 E-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ R A+ E+ + F + D ++N + C+ + A VM M + G PD
Sbjct: 263 KLGRVEDALGYIQQEIADGF--EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY +++ K+ + E G+ N MV +GC P++ TFN I L R +A L
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G+ PD T+N++I C+ G +A +++ M P+ Y T+I LC G
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + KD S T + +++GL K
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ HA+ M G V + N + L ++ L+ + L ++ ++ + DI +FN
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFN 360
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A C L++A + ++ GV PDV T+ LI+A K P + L+ M
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P+ T+N I +L + + +A L+ M+ G +TYN +I G C+ ++ A
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 480
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++V+ M + + N + T+I LC++ + A+ + + + P+ T +++L
Sbjct: 481 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTH 540
Query: 371 LKKNNQPCKANTIM 384
K KA I+
Sbjct: 541 YCKQGDIKKAADIL 554
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 6/279 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G A+ F +M GC + N + L L KA+ L++ E
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD--LLKDMESTGCPRS 460
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I C+ +++A V +M G+ + IT+ TLI KD + + GL N
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G PN T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+A KV M + + P K Y ++ L + + A + ++ + P T
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Query: 366 ALLEGLKKNNQPCKA--NTIMALVQRR-VPHFSSNQLSA 401
+ GL + P K + ++ +V + +P FSS ++ A
Sbjct: 641 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D F +M G + V + N+ + L L + EK I ++ +FN
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFN 332
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM + + PD ITY LI+ F NR + ++ MV K
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C PN+ T+N I +R +L M + G+ + VTY +I+GF ++G D A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ R+ + Y ++H LC G + A ++ K K ++ + ++EG
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 513 M------CKAGKV 519
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L+ E I+ ++ FN +I + C+ ++
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDID-LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM+ G++P+V+TY +LI+ R + L + M+ K PN+ TFN I
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + +A KL M + I+PD +TYNL+I GFC LD AK+++ M+ + +P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N + Y T+I+ C+ + ++ ++ V + T + +++G + A +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 385 -ALVQRRVP 392
+V RVP
Sbjct: 457 KQMVSNRVP 465
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D F DM ++ N L + + + + + L E + I D+++++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVIS-LGEQMQTLGISHDLYTYS 122
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I I FC L A V+ +M KLG +PD++T ++L++ + R L + MV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ TF I L ++ +A L+ M + G +PD VTY V+ G C+ G +D+A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + M R+ N I+ T+I LC+ +A + + K P+V T ++L+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 371 L 371
L
Sbjct: 303 L 303
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI + + ++ +C + A ++ +M ++G KPD T+TTLI + N+ L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +GC P+L T+ + L + A L+ M+ I+ + V +N +I C+
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
H+++A +++ M + + PN Y ++I+ LC G ++ A + + ++K P+V T
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRV 391
+AL++ K + +A + ++QR +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 134/326 (41%), Gaps = 36/326 (11%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S +A +F+ + L E ++L + + + + A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + +L++ L S+ + A + ++ E + + D F+F +I
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY-KPDTFTFTTLIHGLFLHNKA 204
Query: 203 DKAYLVMVEMQKLGVKPDVITY-----------------------------------TTL 227
+A ++ +M + G +PD++TY T+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I + K E+ L+ M KG PN+ T+N I L N R A++L+ M I
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ VT+N +I F + G L A+K++ M+ R + P+ Y +I+ C + A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
M K + K+ +P++ T + L+ G K
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I FC+ ++ + EM + G+ + +TYTT+I F++ + ++
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV ++ T+++ + L + + A + +Q+ +E + YN +I+G C++
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-----QEGD 341
G + A ++ ++ + P+ Y TMI LC QE D
Sbjct: 517 GKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I+ F + G D A +V +M V D++TY+ L+ + + ++ +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
N+ +N I+ + + +A L I+PD VTYN +I G C L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ M +PN Y T+I ++ D + + K+ +V TIS
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A + +M K P ++ + L+SA K N+ E+ L M G +L T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++ M + G EPD VT + ++ G+C S + A + M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + A + +++ P + T ++ GL K
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FP++ FN + + + L MQ GI D TY++ I FCR L +A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V + M+ P+ ++++ C + A + ++ + P T + L+ GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 373 KNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+N KA+ +ALV + V L + ++++
Sbjct: 200 LHN---KASEAVALVDQMVQRGCQPDLVTYGTVVN 231
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 123/245 (50%), Gaps = 1/245 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + ++ + +GC+ + S NA LK L ++ ++ ++E+ + ++ +
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEM-VRVGCPPNVAT 250
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I C G+ ++ + + +M + G PD+ Y T+I KD E+ N + + M
Sbjct: 251 FNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 310
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N ++ L + R +A L+ M + D+VT+N+++ FC++G +D
Sbjct: 311 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 370
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ ML +P+ Y T+I+ C+EG + A ++ K+ P+ + + +L
Sbjct: 371 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 430
Query: 369 EGLKK 373
+GL +
Sbjct: 431 KGLCR 435
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D M YG K V N LK L + + + L E+ ++ D
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCPLDD 353
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++D+ ++ +M + G PDVITYTT+I+ F K+ + L
Sbjct: 354 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 413
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L R A +L+ M + G P+ VT+N +I C+ G
Sbjct: 414 MSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGL 473
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G A + + K P+ S+
Sbjct: 474 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533
Query: 367 LLEGLKKNNQ 376
+ L + +
Sbjct: 534 MASALSREGR 543
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIF 187
G+I A+ +M L GC T + L+ + A++A ++V D
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA--LQVLHAKGCTLDSG 179
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ N+V+ A CE G +D+ ++ ++ G +PD+++Y ++ R + L M
Sbjct: 180 NCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEM 239
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V GC PN+ATFN I +L Q ++ + M G PD Y +I G C+ GH
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 299
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
++A + S M L PN Y T++ LC
Sbjct: 300 EVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +LEH G I ++ G K G++ A+ +M GCK
Sbjct: 371 RVIELLEQMLEH------GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI 424
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + Q + + ++ + + +FN +I C+ G++++A ++ +
Sbjct: 425 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV-TFNTLINFMCKKGLVEQAIELLKQ 483
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + E L N+M+ KG PN ++ L + R
Sbjct: 484 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 543
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ + ++ +Q + D YN VI C+ D A ++ M+ MPN Y
Sbjct: 544 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTI 603
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 604 LIRGLASEG 612
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 131/316 (41%), Gaps = 8/316 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R++ E LL Q+ P + I++ + + G++ +
Sbjct: 317 NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP---LDDVTFNILVDFFCQNGLVDRVI 373
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCK-EGLVDEAVMLLKNMSACGCKPNTISYTIVLKG 432
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C A ++ M + G P+ +T+ TLI+ K E L M+ GC P+
Sbjct: 433 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPD 492
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ + Y+ + R G D +++
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
++ + + +Y +I LC+ + + A + +P+ T + L+ GL
Sbjct: 553 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612
Query: 376 QPCKANTIMA-LVQRR 390
+A +++ L RR
Sbjct: 613 LVREAQDLLSELCSRR 628
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 15/285 (5%)
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
GR I R + G+ A+DT D V + NA + + + A +
Sbjct: 44 SGRLSALI-RSLCAAGRTADAARALDTAGD------AAGVVAYNAMIAGYCRAGQVAAAR 96
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
VP + + +++ ++++ C G++ A V+ EM G ++ A
Sbjct: 97 RLAAAVP----VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEA 152
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ ++ KGC + N+ + + + + +L+ + FG EPD
Sbjct: 153 ACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPD 212
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
V+YN V+KG C + D +++ M+ PN + T+I YLC+ G F +
Sbjct: 213 IVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALS 272
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+ P + + +++G+ K+ AN I++ R+P +
Sbjct: 273 QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS----RMPSYG 313
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 96/191 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F I+++ FC+MG L A + EM G+KPD I YTT I K P G+
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK 475
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G P+L T+NV I L AN+L+ M+ GI PD VTY +I S
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V+S ML + + P+ Y +IH G + A + K P+V T
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595
Query: 365 SALLEGLKKNN 375
+AL+ GL K N
Sbjct: 596 NALIYGLCKEN 606
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 3/253 (1%)
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPE 178
R++ L M+ + + M + T+ + N + + ++ +A++ +++V
Sbjct: 177 RVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVE--VLDVMR 234
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
F + S+N+++ G D+A ++ +M LG+K TY LI F K E
Sbjct: 235 MFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFE 294
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L M+ +G P + T+N + L R A + + +M + PD V+YN +I
Sbjct: 295 EANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+ R G+ A ++S + + L+P+ Y T+I C+ G+ ++A M D +K
Sbjct: 355 YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLC 414
Query: 359 PSVDTISALLEGL 371
P V T + L+ G
Sbjct: 415 PDVVTFTILVRGF 427
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 36/325 (11%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
N ++ V+ L+G FD + L+E L ++ + K M + A D
Sbjct: 241 NDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLR 300
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G TV + N + L + + +L +V + D+ S+N +I +
Sbjct: 301 REMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYL-DVMVNEDLMPDLVSYNTLIYGYSR 359
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+G +A L+ E++ + P V+TY TLI + +I G+ + M+ G P++ T
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVT 419
Query: 259 FNVRIQ--------------------------------HLVNKRRSWQANKLMGL---MQ 283
F + ++ +V + + +K G+ M+
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G PD +TYN++I G C+ G+ D A ++ M ++P+ Y ++IH G
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539
Query: 344 LAYIMCKDSMKKNWVPSVDTISALL 368
A + D +KK PSV T + L+
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLI 564
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ M ++GC S N + L+ + + L+E ++
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKE-LIEQMSMLGLKVSA 277
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I+ FC+ + ++A + EM G P V+TY T++ + + R ++
Sbjct: 278 HTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDV 337
Query: 247 MVCKGCFPNLATFN---------------------VRIQHLVNKRRSWQ----------- 274
MV + P+L ++N +R ++LV ++
Sbjct: 338 MVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN 397
Query: 275 ---ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A + M + G+ PD VT+ ++++GFC+ G+L MAK+++ ML R L P+ Y T
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
I + G+ + A+ M ++ + + P + T + L+ GL K AN ++
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELV 510
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 97/191 (50%), Gaps = 4/191 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + N V+K + ++++ V M K ++P ++T+ T++ + K+ E+G +
Sbjct: 171 DVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEG--EVGRAVE 228
Query: 245 NLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L V + GC PN ++NV + L K +A +L+ M G++ TYN +I+GFC
Sbjct: 229 VLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFC 288
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ + A + MLGR +P Y T+++ LC+ G + A + ++ +P +
Sbjct: 289 KKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLV 348
Query: 363 TISALLEGLKK 373
+ + L+ G +
Sbjct: 349 SYNTLIYGYSR 359
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I A G+L KA V +M K G+ P V+TYT LI ++ R + +
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYF 580
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG PN+ T+N I L + A L M+ G+ P++ TY ++I
Sbjct: 581 DEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNL 640
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ A K+Y ML R + P+ + ++ +L ++
Sbjct: 641 QYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKD 675
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P++ N ++ L +K + ++ +M + I P VT+N ++ C+ G
Sbjct: 163 MVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGE 222
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +V M PN Y +++ L +G+F+ A + + S T +
Sbjct: 223 VGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNP 282
Query: 367 LLEGLKKNNQPCKANTI 383
L+ G K +AN +
Sbjct: 283 LIRGFCKKEMFEEANDL 299
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N+V++A +G LD+ + ++ EM K G+ PD+ TY L+ K ++P L
Sbjct: 283 DVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNLLLHVLGKGDKPLAALNLL 342
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M GC PN+ F I L M + G +PD V Y ++I + +
Sbjct: 343 NYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYVAA 402
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ + ML R +PN Y +MI LC G+F+ A+ M KD P+
Sbjct: 403 GEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSHGCTPNFSVY 462
Query: 365 SALLEGLKKNNQPCKANTIM 384
S+L+ L+ + +AN ++
Sbjct: 463 SSLVRRLRNAGKDTQANNVI 482
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 138/364 (37%), Gaps = 78/364 (21%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFY-DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
I RI++ G +HA+D + + + + + ++ + R K F +
Sbjct: 110 IFRILLQDGPGFSTRHALDEMRPKVSIELVREVLFRIVVSVDSVNRERYPKLAYKFFIWA 169
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF----- 231
++ Q +N+V+K F E G + + + EM G+ T+ LI A
Sbjct: 170 GQQEGYQHSTSMYNLVMKVFAECGEVKAMWRLFEEMAAKGLPVSSRTFHLLICASVKVGL 229
Query: 232 ---------------YKDNRPEIGNGLWNL---------------MVCKGCFPNLATFNV 261
Y+ R L+ L M+ +G P++ T+NV
Sbjct: 230 RRRLVERFIRSSTFNYRPFRNAFNAILYTLLTIEQYSLIEWVHEKMILEGYSPDVLTYNV 289
Query: 262 --RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL----------------------- 296
R ++++ K Q ++L+ M + G+ PD TYNL
Sbjct: 290 VLRAKYMLGKLD--QFHQLLDEMGKNGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSD 347
Query: 297 ------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+I G R+G+L+ + + M+ + P+ Y MI G+F
Sbjct: 348 VGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYVAAGEFEE 407
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKS 404
A D + + +P+V T +++++GL + KA T++ + H + S + S
Sbjct: 408 AQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMD---SHGCTPNFSVYSS 464
Query: 405 ILSK 408
++ +
Sbjct: 465 LVRR 468
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 6/201 (2%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEV 176
++R + GK +D +M G + + N L VL + + L A+ L+
Sbjct: 290 VLRAKYMLGKLDQFHQLLD---EMGKNGLTPDLHTYNLLLHVLGKGDKPLAALN--LLNY 344
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ ++ F +I G L+ EM K G PDV+ YT +I+++
Sbjct: 345 MSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYVAAGE 404
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E ++ M+ +G PN+ T+N IQ L +A ++ M G P+ Y+
Sbjct: 405 FEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAFTMLKDMDSHGCTPNFSVYSS 464
Query: 297 VIKGFCRSGHLDMAKKVYSAM 317
+++ +G A V M
Sbjct: 465 LVRRLRNAGKDTQANNVIKYM 485
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 5/253 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ GK M D + +M G + + + NA +K+L ++ + + + F
Sbjct: 173 LLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI---F 229
Query: 181 HIQF--DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
H D F++ +I C+ G LD A+ + M K G P+ +TY+ LI+ + R E
Sbjct: 230 HYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLE 289
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ M+ KG P + + + I L + RS +A KL+G M++ G P+ TY +I
Sbjct: 290 EAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALI 349
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G R G ++A VY ML L+P Y +I+ L EG F A + + + + +
Sbjct: 350 SGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL 409
Query: 359 PSVDTISALLEGL 371
P+ +T + +++G
Sbjct: 410 PNTETYNVIIKGF 422
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 9/291 (3%)
Query: 100 EHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
E +L H SLP I++ + G I+ A F M G V + N + +
Sbjct: 401 EWMLSHD-SLPNTETYNVIIKG---FCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHI 456
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
+ + L+E+ + ++ D +++ +I F G L+ A+ + EM + G+ P
Sbjct: 457 YFKQGYMNNAMR-LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISP 515
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+V+TY +I+ + + + L+ MV G P+ T+N+ I R +A
Sbjct: 516 NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G M + G+ P+ +TY I G C++G +A K++ M R PN Y ++I LCQE
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G A + D + P+VDT + L+ GL + +A+ ++ ++++
Sbjct: 636 GQAEDAERLLDDGCE----PNVDTYTTLVRGLCGKGRCYEADQLVESMKKK 682
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + F M GC + +A + L L+ L E+ +K I+ +
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDK-GIEPTV 307
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I I + C+ G +A ++ +M+K G P+V TYT LIS +D + E+ G+++
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P T++ I L + R A + M P+ TYN++IKGFC G+
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVDTIS 365
+ A ++ ML PN Y +IH ++G N A + + MK N + T +
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL-EMMKGNGLKLDTWTYA 486
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L+ G + K +L V H S + + +I++
Sbjct: 487 NLISGFSRGG---KLEHAFSLFNEMVEHGISPNVVTYNAIIN 525
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 134/297 (45%), Gaps = 32/297 (10%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G ++HA F +M +G V + NA + + A ++ E ++
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP- 550
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++N++I F + + +A +M K G+ P+VITYT+ I K+ R + ++
Sbjct: 551 SSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIF 610
Query: 245 NLM------------------VCK-------------GCFPNLATFNVRIQHLVNKRRSW 273
+ M +C+ GC PN+ T+ ++ L K R +
Sbjct: 611 HEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCY 670
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A++L+ M++ G++P E Y ++ G C++ ++ A K++ +M+ P Y+ +I
Sbjct: 671 EADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LC+ A M + +KK+W + LL+GL K + + ++ +++ R
Sbjct: 731 CALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%)
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+++TL+ K + +G ++ M+ G PNL TFN I+ L NK + +A +MG +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+G PD TY +I G C++G+LD+A +++ M+ PN Y +I+ LC EG
Sbjct: 229 FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRL 288
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
A M ++ + K P+V + + L + C+A ++ +++R + +A
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTAL 348
Query: 403 KSILSK 408
S LS+
Sbjct: 349 ISGLSR 354
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ A L E HI +D +I FC+ G +D A V ++M K G P V TYT+LI
Sbjct: 467 LDAMLSSGCEPNHIVYDA-----LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+KD R ++ + + M+ C PN+ T+ I L S +A KL+ LM+ G
Sbjct: 522 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ VTY +I G ++G +D++ +++ M + PN Y+ +I++LC G + A ++
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKN 374
+ + W + ++G K+
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKS 667
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI C ++KA+L+ EM+ +GV PDV TYT LI +F K E L+
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P + T+ I + ++ QAN + M G P++VTY ++ G C++
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 305 GHLDMAKKVYSAMLG----------------RRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G++ A +VY+ ++G L PN Y ++ LC+ + A+ +
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ P+ AL++G CKA I
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGF------CKAGKI 495
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 109/278 (39%), Gaps = 86/278 (30%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ I+I +FC+ G++++A + EM+ +G P V+TYT LI A+ K + N ++
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 245 NLMVCKGC---------------------------------------------------F 253
+ MV GC
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG-------- 305
PN+ T+ + L + A++L+ M G EP+ + Y+ +I GFC++G
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 306 ---------------------------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
LD+A KV S ML PN Y MI LC+
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
G+ A + +K P+V T +AL++GL K +
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+++ E+ + D +I E D+A + M+ P+V+TY TL+S F K
Sbjct: 95 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + N+M+ +GC PN + FN + N++ A KL+ M G P V
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214
Query: 294 YNLVIKGFCRSGH------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
YN+ I C LD+A+K+Y ML + N+ LC G F+ A+
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274
Query: 348 MCKDSMKKNWVPSVDTISALL 368
+ K+ M+K +VP T S ++
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVI 295
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 40/330 (12%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + V L A + D+ LL+ L G I+ ++ G KAG I A +
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAM--LSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F M G +V + + + + + L L ++ K ++ ++ +I
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDGL 559
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C +G +KA ++ M++ G P+V+TYT LI K + ++ L+ M KGC PN
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQR-------------------------------- 284
T+ V I HL +A L+G M++
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Query: 285 -FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG--RRLMPNRKIYQTMIHYLCQEGD 341
+G P Y ++I F ++G L++A +++ M+ + + +Y ++I LC
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 739
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
A+ + + ++ +VP + L++GL
Sbjct: 740 VEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 131/326 (40%), Gaps = 16/326 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK F LF+ V + Y + + A + + L E +S+
Sbjct: 305 EKAFLLFQ-EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQA-------- 171
++ Y KA + A D F+ M GC+ + A + L ++ ++ KA +
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423
Query: 172 ------FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
F ++ + ++ ++ ++ C+ +D A+ ++ M G +P+ I Y
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI F K + + ++ M G P++ T+ I + R A K++ M +
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
P+ VTY +I G CR G + A K+ S M + PN Y +I L + G +L+
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ +K P+ T L+ L
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHL 629
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
++ FG P +VTYN +++ +G +D+ +V M +R H LC+EG
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 342 FNLAYIMC-KDSMKKNWVPSVDTISALLEG 370
+ A M ++ K + V IS L+E
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEA 120
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 3/202 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +N+V+ C++G L++A ++ +M GV PD +TYT++I A ++ R G ++
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P++ T+ V I K R +A MQ GI P+ +TYN +I G C+
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ M+ + + PN+ Y +I+ C G++ A + K + + P T
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692
Query: 365 SALLEGLKKNNQPCKANTIMAL 386
SALL+ L K+ CK + L
Sbjct: 693 SALLKQLGKD---CKLQAVRQL 711
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +Y K M++ + F M VK+ N L++L + +DL + + +F
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRD-KDLMSKAVEVYRTMGEF 228
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ I ++N ++ ++C+ G + + ++ EMQ+ G P+ +TY LI+ K E
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL M+ G + T+N I NK +A L M G P TYN I G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G + A + S ML L+P+ Y T+I+ C+ G+ A+++ + P+
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 361 VDTISALLEGLKKNNQ 376
+ T + LL+GL + +
Sbjct: 409 IVTYNTLLDGLCRQGE 424
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L L +L+ Q +E+ + I DI ++ I++ C+MG L A
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM G++ D Y T I K L M+ KG P+L +NV + L
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+A++L+ M G+ PD VTY +I +G L ++++ ML + L P+
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Y +IH +G A+I + +K +P+V T ++L+ GL K
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEK 179
++YG GM+ A+ +M L G TV + N+ + L + R A+Q +
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN- 368
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D+ S+N +I +C +G L KA+L+ E++ + + P ++TY TL+ + E+
Sbjct: 369 -NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 427
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQ--------------------------------HLV 267
L M+ +G P++ T+ + + +V
Sbjct: 428 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487
Query: 268 NKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + ++ L + G PD + YN+V+ G C+ G+L+ A ++ M+ ++P
Sbjct: 488 GELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ Y ++IH + G + + + K PSV T + L+ G
Sbjct: 548 DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D +++ I ++G +A+ + EM G PD+I Y ++ K E +
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L MV G P+ T+ I + R + ++ M G+ P VTY ++I G
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
G L+ A +S M + ++PN Y ++I+ LC+ + AY + ++K P+
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++I G L++A++ EMQ+ G+ P+VITY +LI+ K R + +
Sbjct: 584 VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFA 643
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV KG FPN ++ + I N +A L M G++PD T++ ++K +
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDC 703
Query: 306 HLDMAKKVYSAM 317
L +++ S +
Sbjct: 704 KLQAVRQLESLL 715
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 176/427 (41%), Gaps = 82/427 (19%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
AL+ + + +F H +I + V+ L +RF I LL K
Sbjct: 69 ALIGKGKPHEAQAVFHNLTEEGHKPTLI----TYTTLVAALTRQKRFKSIPALL--SKVA 122
Query: 110 PQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL-TESRDL 166
G + I+ M+ + +G + AM F M YGCK T + N +K R
Sbjct: 123 DNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPY 182
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
++++ M + + +++ + ++NI+I+A+C L++A+ V+ +M G++PDV+TY T
Sbjct: 183 ESMKLLEM-MGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNT 241
Query: 227 LISAFYKDNRPEIGN------------------GLWNLMVCK-----------------G 251
+ A+ ++ E G+ CK G
Sbjct: 242 MARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELG 301
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT------------------ 293
PN FN I+ ++ + ++ + LM+ FGI+PD VT
Sbjct: 302 VHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCE 361
Query: 294 -----------------YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
Y+++ KG+ R+G A+ + ++M + N I+ T+I
Sbjct: 362 EIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGW 421
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPHF 394
C G + A+ +C+ + P++ T L+ G + QP KA I++ ++ R VP
Sbjct: 422 CAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEM 481
Query: 395 SSNQLSA 401
S+ QL A
Sbjct: 482 STMQLVA 488
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 39/246 (15%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
+++ K P R G I+ Y K G + A+ Y M G N+ +K +
Sbjct: 262 MQYNKVKPNERTCGIIIS---GYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLD 318
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD------------------- 203
+ D + L + E+F I+ D+ +F+ ++ A+ G++D
Sbjct: 319 ATDTNGVDEALT-LMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIH 377
Query: 204 ----------------KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
KA ++ M K GV+ +V+ +TT+IS + + + L M
Sbjct: 378 AYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKM 437
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PNL T+ I ++ W+A +++ M+ G+ P+ T LV + G
Sbjct: 438 HEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLF 497
Query: 308 DMAKKV 313
A ++
Sbjct: 498 KEANRI 503
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 3/199 (1%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ A G +A V + + G KP +ITYTTL++A + R + L + + G
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P+ N I + + +A K+ M+ +G +P TYN +IKGF G +
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESM 185
Query: 312 KVYSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
K+ M+G+ + PN + Y +I C + A+ + + P V T + +
Sbjct: 186 KLLE-MMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMAR 244
Query: 370 GLKKNNQPCKANTIMALVQ 388
+N + KA ++ +Q
Sbjct: 245 AYAQNGETEKAERLILKMQ 263
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%)
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T L++A +P +++ + +G P L T+ + L ++R L+ +
Sbjct: 64 TKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD 123
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
G++PD + N +I F SG +D A K++ M P Y T+I
Sbjct: 124 NGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLI 172
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ A L E HI +D +I FC+ G +D A V ++M K G P V TYT+LI
Sbjct: 467 LDAMLSSGCEPNHIVYDA-----LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+KD R ++ + + M+ C PN+ T+ I L S +A KL+ LM+ G
Sbjct: 522 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ VTY +I G ++G +D++ +++ M + PN Y+ +I++LC G + A ++
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKN 374
+ + W + ++G K+
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKS 667
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI C ++KA+L+ EM+ +GV PDV TYT LI +F K E L+
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P + T+ I + ++ QAN + M G P++VTY ++ G C++
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 305 GHLDMAKKVYSAMLG----------------RRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G++ A +VY+ ++G L PN Y ++ LC+ + A+ +
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ P+ AL++G CKA I
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGF------CKAGKI 495
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 109/278 (39%), Gaps = 86/278 (30%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ I+I +FC+ G++++A + EM+ +G P V+TYT LI A+ K + N ++
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 245 NLMVCKGC---------------------------------------------------F 253
+ MV GC
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG-------- 305
PN+ T+ + L + A++L+ M G EP+ + Y+ +I GFC++G
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 306 ---------------------------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
LD+A KV S ML PN Y MI LC+
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
G+ A + +K P+V T +AL++GL K +
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+++ E+ + D +I E D+A + M+ P+V+TY TL+S F K
Sbjct: 95 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + N+M+ +GC PN + FN + N++ A KL+ M G P V
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214
Query: 294 YNLVIKGFCRSGH------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
YN+ I C LD+A+K+Y ML + N+ LC G F+ A+
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274
Query: 348 MCKDSMKKNWVPSVDTISALL 368
+ K+ M+K +VP T S ++
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVI 295
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 40/330 (12%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + V L A + D+ LL+ L G I+ ++ G KAG I A +
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAM--LSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F M G +V + + + + + L L ++ K ++ ++ +I
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDGL 559
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C +G +KA ++ M++ G P+V+TYT LI K + ++ L+ M KGC PN
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQR-------------------------------- 284
T+ V I HL +A L+G M++
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Query: 285 -FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG--RRLMPNRKIYQTMIHYLCQEGD 341
+G P Y ++I F ++G L++A +++ M+ + + +Y ++I LC
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 739
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
A+ + + ++ +VP + L++GL
Sbjct: 740 VEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 16/326 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK F LF+ V + Y + + A + + L E +S+
Sbjct: 305 EKAFLLFQ-EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK------------- 167
++ Y KA + A D F+ M GC+ + A + L ++ ++
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423
Query: 168 --AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
A F ++ + ++ ++ ++ C+ +D A+ ++ M G +P+ I Y
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI F K + + ++ M G P++ T+ I + R A K++ M +
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
P+ VTY +I G CR G + A K+ S M + PN Y +I L + G +L+
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ +K P+ T L+ L
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHL 629
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
++ FG P +VTYN +++ +G +D+ +V M +R H LC+EG
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 342 FNLAYIMC-KDSMKKNWVPSVDTISALLE 369
+ A M ++ K + V IS L+E
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLME 119
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 154 NAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N+ L L +++ + +A F V E+ + D+ S++I+I FC++ L +A + +M
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVP-DVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
L P+V TY ++ + R G++ MV GC P++ T++ I R+
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
QA++L M G P+ VTYN ++ G C+ D A +++ M+ R P+R Y T+
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ C G A + + + K P V + LL+G + +P +A + ++ R
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 6/236 (2%)
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKH--AMDTFYDMHLYGCKRTVKSLNAALKVLT- 161
+++ + G I +++G + KH A + F M GC+ + N L L
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
ES+ +A + F V D ++ ++ FC +G +++A V EM G PDV
Sbjct: 600 ESKPDEAHELFRKMVERG--CDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDV 657
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y L+ F++ +P L+ +MV + C P+ + N+ I L +R A ++
Sbjct: 658 VAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFER 717
Query: 282 M-QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
M Q G PD VTYN +I G C L A KV+ + +L P+ + ++ +
Sbjct: 718 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
+ G I A + +M GC V + + + + +R K QA L E + +
Sbjct: 529 RKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLAR--KHDQAHELFETMISRGCRPN 586
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N ++ C+ D+A+ + +M + G PD +TYTTL+ F + E +++
Sbjct: 587 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFD 646
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV KG P++ +N ++ + +A +L +M +PD V++N++I G ++
Sbjct: 647 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAK 706
Query: 306 HLDMAKKVYSAM-LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A +V+ M P+ Y ++I LC E + A + K+ + P
Sbjct: 707 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 766
Query: 365 SALLEGLK 372
+ LLE +K
Sbjct: 767 NVLLEAIK 774
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++++I+ E G +DKA +E+ ++P T ++I K R + L M+
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR--FGIEPDEVTYNLVIKGFCRSGH 306
+G P++AT ++ I L + +A + + M R +YN ++ C++
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461
Query: 307 LDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A ++S M+ R +P+ Y +I C+ + A + K + N VP+V T +
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 366 ALLEGLKKNNQPCKANTI 383
A L GL + + A +
Sbjct: 522 AFLNGLMRKGRIADAQGV 539
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP-NLATFNVRIQHLVNKR 270
M K G KPD Y+ ++ A K + L+ M + P N + + L
Sbjct: 260 MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSG 319
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ QA + MQ + + Y+++I+ SG +D A++ + GR + P+
Sbjct: 320 KIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCH 378
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++I LC+ G + A + + +K+ + P + T S L+ N+ CKA+ I
Sbjct: 379 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLI------NELCKADKI 425
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 10/231 (4%)
Query: 128 AGMIKHAMD-----TFYD-MHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKF 180
+IKH D TF+ + K V + N L L RDLK A Q F V +
Sbjct: 101 GAVIKHLRDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQG- 159
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + F++ +++++ C D+A EM G KP Y + +
Sbjct: 160 -VVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEF 218
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ ++ + K + + + V + ++ +A+KL M + G +PD Y+ ++
Sbjct: 219 SRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLA 278
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMP-NRKIYQTMIHYLCQEGDFNLAYIMCK 350
C+ +LD A K++ M P N + + LC+ G A+ C+
Sbjct: 279 HCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACR 329
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A M G V + A L ++ ++ L E+ K +Q
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK-GLQP 485
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++N ++ C++G +++ +M EM G PD ITYTTL+ A+ K + L
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M+ K P L TFNV + +L+ M GI P+ T+N ++K +C
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ ++Y AM R +MP+ Y +I C+ + A+ + K+ ++K + + T
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665
Query: 365 SALLEGLKKNNQPCKA 380
AL+ G K + +A
Sbjct: 666 DALIRGFYKRKKFVEA 681
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +N +I C+ G + +A ++ M+K GV PD + YTT+IS F K L+
Sbjct: 311 DEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLF 370
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M K P++ T+ I + + +A ++ M G+EPDEVTY +I G+C++
Sbjct: 371 DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V++ M+ + L PN Y + LC+ G+ ++A + + +K P+V T
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490
Query: 365 SALLEGLKK 373
+ ++ GL K
Sbjct: 491 NTIVNGLCK 499
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++ VI C+ G + +A + EM G++PD +TYT LI + K + +
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV KG PN+ T+ L AN+L+ M R G++P+ TYN ++ G C+
Sbjct: 441 NQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKI 500
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+++ K+ M P+ Y T++ C+ G+ A+ + + + K P++ T
Sbjct: 501 GNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTF 560
Query: 365 SALLEGL 371
+ L+ G
Sbjct: 561 NVLMNGF 567
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 35/297 (11%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F+ + YG +V S N L L+ + + I + E + + ++ S
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVS 244
Query: 189 FNIVIKAFCEMGI-----------------------------------LDKAYLVMVEMQ 213
NIV+ C++G LDK ++ E++
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
G+KPD Y +I K+ L M G FP+ + I
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A KL M+R I PD VTY VI G C+SG + A+++++ ML + L P+ Y +I
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C+ G+ A+ + ++K P+V T +AL +GL KN + AN ++ + R+
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + VI FC++G + A + EM++ + PD++TYT++I K + ++
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ KG P+ T+ I +A + M + G+ P+ VTY + G C++
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D+A ++ M + L PN Y T+++ LC+ G+ + ++ + P T
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
+ L++ K + KA+ ++ ++
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIM 548
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 81/174 (46%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q + +FN+++ FC G+L+ ++ M + G+ P+ T+ +L+ + N
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M +G P+ T+N+ I+ R +A L M G TY+ +I+GF
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+ A+K++ M L+ + IY + +EG++ + +C + M +
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTE 726
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 9/266 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF-HIQFDIFSF 189
++ A++ +M GC ++ + + ++ + FL E+ KF ++ D+ +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM--KFMGLEADLVVY 250
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I+ FC+ G LD+ + E+ + G P ITY TLI F K + + + ++ M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G PN+ T+ I L ++ +A + + LM EP+ VTYN++I C+ G +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN----LAYIMCKDSMKKNWVPSVDTIS 365
A ++ M RR P+ Y ++ LC +GD + L Y+M KDS + P V + +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYN 428
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRV 391
AL+ GL K N+ +A I L+ ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F++++ NI++K C KA ++ EM++ + PDV +Y T+I F + E L
Sbjct: 140 FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N M GC +L T+ + I + +A + M+ G+E D V Y +I+GFC
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD K ++ +L R P Y T+I C+ G A + + +++ P+V T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 364 ISALLEGL 371
+ L++GL
Sbjct: 320 YTGLIDGL 327
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG + AM +M G + + + ++ + +L +A EV E+
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I ++N +I+ FC++G L +A + M + GV+P+V TYT LI + +
Sbjct: 282 AI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPL 340
Query: 245 NLMVCKGCFPNLATFN---------------VRIQHLVNKRRSW---------------- 273
NLM+ K PN T+N V I L+ KRR+
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 274 ----QANKLMGLMQRFG--IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+A+KL+ LM + +PD ++YN +I G C+ L A +Y ++ + +R
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+++ + GD N A + K V + DT +A+++G K
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I FC+ G+L+ A ++ +M+ ++P V Y L+S+ K+ + L+ M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
FP++ +FN+ I + A L+ M R G+ PD TY+ +I F + G+L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A + M+ P+ I +++ Y +G+
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGE 649
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
KAG + AM+ + + R + A + ++ L + L M V E +Q
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE---LQP 527
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+F +N ++ + C+ G LD+A+ + EMQ+ PDV+++ +I K + L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+L T++ I + +A M G EPD + V+K
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G D ++ ++ + ++ ++++ T++ Y+C
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K GM+ A M + + +V N L L + L QA+ L E ++ +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD--QAWRLFEEMQRDNNF 561
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ SFNI+I + G + A ++V M + G+ PD+ TY+ LI+ F K +
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ MV G P+ + +++ +++ + + +L+ + I D+ V+ C
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Query: 304 -SGHLDMAKKV 313
S ++D+AK++
Sbjct: 682 SSANMDLAKRL 692
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
++ + L+ + + + G+ LM+ +G N+ N+ ++ L +A L+
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+R + PD +YN VI+GFC L+ A ++ + M G + + +I C+ G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 342 FNLA 345
+ A
Sbjct: 228 MDEA 231
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L P+ Y T+I+ LC++GD A+ + + K P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KITYTTLIDGCCKEGD 332
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 16/322 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE----- 115
+K ++F + +VI + ++ L G+ R D I +H L +G E
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIA---DHFDKLCRGGIEPSGVS 218
Query: 116 --GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
GF++ + G+ + A+D + G + + S N LK L S D + + L
Sbjct: 219 AHGFVLDALFCKGE---VTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVASRL 273
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ +F +I FC+ G +D+A+ + M++ G++PD+I Y+TLI ++K
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+G+ L++ + KG ++ F+ I V A+ + M GI P+ VT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++IKG C+ G + A +Y +L R + P+ Y ++I C+ G+ + + +D +
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 354 KKNWVPSVDTISALLEGLKKNN 375
K + P V L++GL K
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQG 475
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 5/214 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAF-LMEVPEKFHIQF 184
K G++ HAM M + V N+ + +R +A++ F LM + + I+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI---YGIKP 529
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F V++ G L++A + M K+G++PD + Y TLI AF K +P IG L+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM ++A NV I L R A+K + +EPD VTYN +I G+C
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
LD A++++ + PN +IH LC+
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAGM+ F G K V ++ + V +S DL + + I
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISP 389
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I+IK C+ G + +A+ + ++ K G++P ++TY++LI F K G L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P++ + V + L + A + M I + V +N +I G+CR
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A KV+ M + P+ + T++ EG A + K P
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
L++ K+ +P + L+QR
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQR 594
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ E+ + L +L++ G PN+ TF I + +A L +M++ GIEPD + Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I G+ ++G L M K++S L + + + ++ + I + GD A ++ K +
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T + L++GL ++ + +A + + +R
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +++ + G++ A V+M ++ +V+ + +LI + + NR + ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM G P++ATF ++ + + R +A L M + G+EPD + Y +I FC+
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ +++ M ++ + + +IH L
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 197 CEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAFYKDNRPEIGNGLWNL--------- 246
C G++DKA + V +LGV P Y L S D I + L
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 247 ----------MVCKGCFPNLATFNVRIQH------LVNKRRSWQ---------ANKLMGL 281
+ CKG F+ + +V+ + + A++L+ L
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ G P+ VT+ +I GFC+ G +D A ++ M R + P+ Y T+I + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + ++ K V S+ ++ K+ A+ +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 9/293 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY-D 140
A E V RLA A D ++ L+ + EG ++ + + +AG A+ TFY
Sbjct: 63 AHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 122
Query: 141 MHLYGCKRTV--KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+H GC R + N + L + A+ A + K +Q ++F++N++++A C+
Sbjct: 123 VHDLGCARPTAPRLYNHLIDALLRENMVGAV-ALVCGNMRKDGVQPNVFTYNLLVRALCQ 181
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+ A ++ EM G PD +TY T++SA R + V P A+
Sbjct: 182 NHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEAT-----EVLSAAPPVAAS 236
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N I L + R + ++G M G++P+ +TY ++ FC++G L MA + + M+
Sbjct: 237 YNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMV 296
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN + ++ L +G + A M K + + W PS + + L+ GL
Sbjct: 297 ITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGL 349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S NA + L ++ + A + ++ + +Q ++ ++ ++ AFC+ G L A ++
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGR-GLQPNVITYTTIVNAFCKAGELRMACAILAR 294
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G P+V T+T L+ + D R +W MV +G P+ ++NV I+ L +
Sbjct: 295 MVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGD 354
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A+ ++ M++ G P+ TY+ +I GF ++G LD A +++ M PN +Y
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
M+ C++ FN A + + +N P+ T + L+ L
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 3/252 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL-TESRDLKAIQAFLMEVPEK 179
I+ + KAG ++ A M + GC V + A + L + R A+ + V E
Sbjct: 275 IVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEG 334
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ S+N++I+ C +G L A V+ +M++ G P+ TY+TLI F K +
Sbjct: 335 W--APSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDG 392
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+WN M GC PN+ + + K QA L+ M P+ VT+N +I+
Sbjct: 393 AISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIR 452
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C + A V+ M PN + Y ++H L +EG+ A M +
Sbjct: 453 SLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIEL 512
Query: 360 SVDTISALLEGL 371
S+ T + ++ GL
Sbjct: 513 SLVTYNTVVSGL 524
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-DIF 187
G + A+D + M G + S N ++ L DLK + L ++ + H F +
Sbjct: 318 GRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ--HGCFPNAR 375
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I F + G LD A + +M + G KP+V+ YT ++ F K L + M
Sbjct: 376 TYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKM 435
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ + C PN TFN I+ L N RR +A + M+R G P+ TYN ++ G R G+
Sbjct: 436 LVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNC 495
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
A ++ M + + Y T++ LCQ
Sbjct: 496 GDALQMVIEMQNHGIELSLVTYNTVVSGLCQ 526
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 14/277 (5%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
+E P R ++ + KAG + A+ + DM GCK V + V +
Sbjct: 365 MEQHGCFPNARTYSTLID---GFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCK 421
Query: 163 SRDLKAIQAFLMEVPEKFHIQF---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
++ + +K ++ + +FN +I++ C + +A V EM++ G P
Sbjct: 422 KLMFNQAESLI----DKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPP 477
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
+ TY L+ +++ G+ L + M G +L T+N + L R +A
Sbjct: 478 NGRTYNELLHGLFREG--NCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMF 535
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+G M GI+PD T+ +I +C+ G + MA + AM N +Y ++ LC
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELC 595
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ A + + + P+ T + L+ G+ +N
Sbjct: 596 NQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRN 632
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 18/259 (6%)
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQ 213
AA++ L + D+ +Q L E+ + + + + AF G D+A +
Sbjct: 66 AAVRRLAAAGDVDGVQLELQEMRLR-GVPCTEGALVAAVGAFARAGAPDRALKTFYRAVH 124
Query: 214 KLGV-KPDVI-TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
LG +P Y LI A ++N + M G PN+ T+N+ ++ L R
Sbjct: 125 DLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHR 184
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A K++ M G PD+VTY ++ C G +D A +V SA P Y
Sbjct: 185 VGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNA 239
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI---MALVQ 388
+I LC+E + + D + + P+V T + ++ N CKA + A++
Sbjct: 240 VILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIV------NAFCKAGELRMACAILA 293
Query: 389 RRVPHFSSNQLSAFKSILS 407
R V + ++ F +++
Sbjct: 294 RMVITGCTPNVATFTALVG 312
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 38/296 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K G I+ A F ++ G + T S N + L +SR+L + F L + E+ I
Sbjct: 233 FCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD--EGFRLKKTMEENRIY 290
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F+++++I C+ G LD A + EMQ+ G++P+ IT+T LI + R +
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNT 350
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ G P+L +N + L +A KL+ M+ G++PD++TY +I G+C+
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCK 410
Query: 304 SGHLDMAKKV---------------YSAML------GR--------------RLMPNRKI 328
G L+ A ++ ++A++ GR + P+
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I C++G+ + + + K+ P V T + L+ GL K Q AN ++
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLL 526
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 15/260 (5%)
Query: 121 IMMLYGKAGMIKHAMDTF-------YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+M+ Y +G + A+ F + + +GC L + S I F
Sbjct: 159 LMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGC-------GYLLDKMINSNSPVTIWTFY 211
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E+ E + + +NI+I FC+ G + A L+ E++K G++P +++ TLI+ K
Sbjct: 212 SEILE-YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ G L M +P++ T++V I L + R A +L MQ+ G+ P+ +T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ +I G CRS +D A Y ML + P+ +Y T+++ LC+ GD N A + +
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390
Query: 354 KKNWVPSVDTISALLEGLKK 373
P T + L++G K
Sbjct: 391 MVGMKPDKITYTTLIDGYCK 410
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 41/325 (12%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
L R+ ++ F+L K NRI + + + + L R D E L + + +G
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ--RGL 324
Query: 114 REGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
R I ++ G ++ I AM+T++ M G K
Sbjct: 325 RPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKP----------------------- 361
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
D+ +N ++ C++G ++KA ++ EM+ +G+KPD ITYTTLI +
Sbjct: 362 -------------DLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGY 408
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
K+ E + M +G + F I R A + + M G++PD+
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TY +VI G+C+ G++ M K+ M P Y +++ LC++G A ++ +
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
+ P T + LLEG KN +
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGK 553
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 137 TFYDMHL-YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
TFY L YG V+ N + + ++ + E+ K ++ SFN +I
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI-RKRGLRPTTVSFNTLING 267
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C+ LD+ + + M++ + PDV TY+ LI K+ R ++ L++ M +G PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
TF I RR A M G++PD V YN ++ G C+ G ++ A+K+
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M + P++ Y T+I C+EGD A + K ++ V +AL+ G ++
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447
Query: 376 Q 376
+
Sbjct: 448 R 448
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+G P YN++I FC+ G + AK +++ + R L P + T+I+ LC+ + +
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE 276
Query: 345 AYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + K +M++N + P V T S L+ GL K + A + +Q+R
Sbjct: 277 GFRL-KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ ++N+++ C+ G + A +++ M LGV PD ITY L+ K+ + E
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 3/254 (1%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N + L ++ ++ E+ K ++ ++ S+N +I FC+ L A V
Sbjct: 79 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDLVAAKDVF 137
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M + P+V+TYTTLI K + + + + MV KG PN+AT++ I
Sbjct: 138 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 197
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
RR +A+KL+ M GI P VTYN+++ CR+ L+ A K++ M RR P Y
Sbjct: 198 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 257
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ- 388
T++ LC + A+ + + + K P T L GL + + +A +M ++
Sbjct: 258 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKL 317
Query: 389 -RRVPHFSSNQLSA 401
+R P S+Q A
Sbjct: 318 TKRNPFGRSSQGKA 331
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +++ C+ +D A + EM G+KPD Y ++S ++ + E L+
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + PN+ T+N I L R A +L M G P EV+YN +I GFC+
Sbjct: 68 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L AK V+ M+ +PN Y T+I L + G A + +KK P+V T
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Query: 365 SALLEGLKK 373
S L++G K
Sbjct: 188 SCLIDGFCK 196
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K I A+ T +M G K N L L + ++ + L E K I ++
Sbjct: 21 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR-LLFEKMVKQRINPNV 79
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ ++ AY + EM G P ++Y TLI F K +++
Sbjct: 80 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 139
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C PN+ T+ I L + A +++ M + G+ P+ TY+ +I GFC+
Sbjct: 140 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 199
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A K+ M+ + + P Y +++ LC+ A+ + + ++ P+V T +
Sbjct: 200 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 259
Query: 367 LLEGLKKNNQ 376
LL L + Q
Sbjct: 260 LLRALCHHKQ 269
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PD +TY ++ K R + M +G P+ +N + L + + +A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M + I P+ VTYN +I G C++ ++ A +++ M G+ +P Y T+I C+
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ D A + ++ N VP+V T + L++GL K+ +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 164
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 9/302 (2%)
Query: 87 VSRLAGARRFDYIEHL-LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYG 145
V + + R + E L L H S P R + I+ + GKA A++ F
Sbjct: 138 VGQSSWQRALEVYEWLNLRHWYS-PNAR---MLATILSVLGKANQEALAVEIFARAEA-A 192
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG--ILD 203
TV+ NA + V + +Q L+++ + D+ SFN +I A + G + +
Sbjct: 193 SGNTVQVYNAMMGVYARTGRFTKVQE-LLDLMRSRGCEPDLVSFNTLINARLKSGTMVTN 251
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ E+++ G++PD+ITY TLISA +++ E ++N MV C P+L T+N I
Sbjct: 252 LAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMI 311
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
S +A +L ++ G PD VTYN ++ F R G++D K++ M+
Sbjct: 312 SVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFG 371
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ Y T+IH + G +LA+ + D P T + L++ L K N +A +
Sbjct: 372 KDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEV 431
Query: 384 MA 385
M+
Sbjct: 432 MS 433
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 1/219 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +YG+ GM + A F D+ G + N+ L ++ ++ + E K
Sbjct: 310 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE-ICEDMVKM 368
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D ++N +I + + G D A+ + +M+ G PD +TYT LI + K N +
Sbjct: 369 GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 428
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + M+ P L TF+ I + +A + M R GI+PD + Y++++
Sbjct: 429 AEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDI 488
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
R A K+Y M+ P+ +Y+ M+ L +E
Sbjct: 489 LLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKE 527
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ + DM + C+ + + NA + V + ++ K + D ++N
Sbjct: 285 LEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLP-DAVTYN 343
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ AF G +DK + +M K+G D +TY T+I + K + ++ L++ M
Sbjct: 344 SLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS 403
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T+ V I L +A ++M M ++P T++ +I G+ ++G A
Sbjct: 404 GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEA 463
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + ML + P+ Y M+ L + + A + ++ + ++ P +L
Sbjct: 464 EETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRV 523
Query: 371 LKKNNQ 376
L K N+
Sbjct: 524 LGKENR 529
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ ++ K C + + +++ ++ N +A KL+G+M+ G+EP T +L++ +
Sbjct: 596 LFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYS 655
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
SG + A+KV + L + Y ++I + GD N+A
Sbjct: 656 GSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVA 698
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 5/246 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD----LKAIQAFLMEVPE-KFHIQFD 185
I A F M GC V + +K L + + LK Q L ++ + + + +
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++NI++ C++G D+A + EM+ G+ P +I+Y +LI F + E L +
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G P++ TFNV I L + + +A KL+G+M GI PD VTYN +I+GFC G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A++++ +M + P+ Y +I+ + A + + + P+V T
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 366 ALLEGL 371
+LL+G+
Sbjct: 395 SLLKGI 400
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 45/349 (12%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + V L R D + L E K+ QG I +++G AG + +
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKT--QGMIPSIISYNSLIHGFCCAGKWEESKR 271
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKA 195
+M G + + + N + L ++ K I+A L+ V + I D+ ++N +I+
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLC--KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
FC +G L+ A + V M G +PDVI+Y LI+ + K + E L+N M+ G PN
Sbjct: 330 FCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 389
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY--------------------- 294
+ T++ ++ + + A KL +M+ GI + TY
Sbjct: 390 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFT 449
Query: 295 --------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
N +I G C++G L+ A +++ + PN Y MIH C+EG
Sbjct: 450 ELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 509
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ A ++ + P + T + L+ G ++N K ++ L+ R
Sbjct: 510 QVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN---KLEEVVQLLHR 555
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 138/306 (45%), Gaps = 14/306 (4%)
Query: 91 AGARRFDYIEHLLEHQKSLPQGRRE-GFIMRIMMLYGKAGMIK--HAMDTFYDMHLYGCK 147
A + R + L H ++P + F +R + K G + HA+ F+ M
Sbjct: 11 ASSIRNSNLSSLFTHSSAIPSPNPQIAFFLR----HCKTGNVTATHALHFFHLMMRSTPT 66
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
++ S N L L + + + + ++ + D + NI++ C + L + +
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLREGFA 125
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
+ + G P+++TY TLI ++R L+ M GC P++ T+ I+ L
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185
Query: 268 NKRRSWQANKL----MGLMQRFGI--EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
A KL + + R+ I +P+ +TYN+++ G C+ G D AK+++ M +
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
++P+ Y ++IH C G + + + + + + P + T + L++ L K + +A
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 305
Query: 382 TIMALV 387
++ ++
Sbjct: 306 KLLGVM 311
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 112 GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
G+R I +L G AG + A F M +G + L L ++ L
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
E+ + + +I + N +I C+ G L+ A+ + ++ G +P+V+TYT +I
Sbjct: 445 MKLFTELKSS-NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 503
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F ++ + + N L M GC P++ T+N ++ + + +L+ M + + P
Sbjct: 504 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563
Query: 290 DEVTYNLVI 298
D +T ++V+
Sbjct: 564 DAITCSIVV 572
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM F ++ K +++LN + L ++ L+ ++ + H + ++ ++ I+I
Sbjct: 444 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH-EPNVVTYTIMI 502
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC G +DKA +++ +M+ G PD+ITY TL+ FY+ N+ E L + M K
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
P+ T ++ + +++K +Q + + L+ RF I+
Sbjct: 563 PDAITCSIVVD-MLSKDEKYQ--ECLHLLPRFPIQ 594
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K ++ AM + +M L G + V + ++ LK + + + + L V + I
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK-LFSVMKAHGIAE 423
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++ I + C+ L +A + E++ K ++ LI K + E L+
Sbjct: 424 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF 483
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G PN+ T+ + I + + +AN L+ M+ G PD +TYN +++GF S
Sbjct: 484 EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 543
Query: 305 GHLDMAKKVYSAMLGRRLMPN 325
L+ ++ M + + P+
Sbjct: 544 NKLEEVVQLLHRMAQKDVSPD 564
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 116/220 (52%), Gaps = 1/220 (0%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L+ L + R K + F E+ E + ++ FNI++ FC+ G + A V + K G
Sbjct: 96 LEHLMKLRYFKLVWGFYEEILECGY-PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 154
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + AN
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDAN 214
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+ L
Sbjct: 215 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 274
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
C+ GD A+ + + K P T + L++G K
Sbjct: 275 CKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 314
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +M + K G I+ A F + +G + +V S N + DL + F ++
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 183
Query: 177 PEKFH-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 184 AMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNG 243
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L QA+ L+ M G++PD+ TY
Sbjct: 244 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYT 303
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A K M+ + + Y +I LCQEG A M ++ +
Sbjct: 304 TLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSV 363
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K K + ++ +QR
Sbjct: 364 GLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 397
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L ++ DLK + E+ K ++ D
Sbjct: 241 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMK-GLKPDK 299
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ + +
Sbjct: 300 FTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLRE 359
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P++ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 360 MLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRIAQSVFDAITKW 171
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 231
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L P+ Y T+I+
Sbjct: 232 NELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K+
Sbjct: 292 LCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGD 332
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + +Y +I LC+EG A M ++ +
Sbjct: 322 TLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 91 AIECYRLTREHKFWVPFD--TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNIL 148
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F KD I +++ + G P++ ++N + + + +L M G+
Sbjct: 149 MHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 209 QPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAME 268
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A+ ++
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + + D + YT LIS ++ + +
Sbjct: 318 ITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRI--VIENKYAFEDTVSR---LAGARRFDYIEHLLE 104
L L+ +DP K + FK E+ + + + R L AR F + + +
Sbjct: 81 VLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLF--SIEK 138
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
H K + + F ++ Y +AG+ K +M F M +V + N+ + +L +
Sbjct: 139 HSKGTVK-LEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRG 197
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+ E+ + + D ++N++I+ FC+ ++D+ + EM+ DV+TY
Sbjct: 198 RTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTY 257
Query: 225 TTLISAFYKDNRPEIGNGLWNLM--VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TL+ + + I L N M C+G PN+ T+ I+ K+ +A ++ M
Sbjct: 258 NTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 317
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGD 341
G++P+ +TYN ++KG C + LD K V M P+ + T+IH C G+
Sbjct: 318 TSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGN 377
Query: 342 FNLAYIMCKDSMKKNWVPS 360
+ A + +SMKK +P+
Sbjct: 378 LDEA-LKVFESMKKFRIPA 395
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 8/248 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ +M G K + + N +K L E+ L ++ L + D F+FN
Sbjct: 307 VEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFN 366
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C G LD+A V M+K + D +Y+TLI + + ++ L++ + K
Sbjct: 367 TIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEK 426
Query: 251 -------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
G P A++N + L ++ +A +++ + + G + D +Y VI G C+
Sbjct: 427 EILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCK 485
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + ++ ML R +P+ +IY +I Q+ LA + +K ++ P T
Sbjct: 486 EGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTST 545
Query: 364 ISALLEGL 371
++L L
Sbjct: 546 WHSVLAKL 553
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 3/252 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ + +M G TV + + + + A L E+ E I +
Sbjct: 138 KDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM-EHRGITPNT 196
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK--PDVITYTTLISAFYKDNRPEIGNGLW 244
++ +I+ C+ G +++A LV+ EM+ G + P+V+TYT LI + E+G
Sbjct: 197 VTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFL 256
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ GCFPN AT+ I L K +A L+ M G E D V YN +I G C+
Sbjct: 257 DEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKM 316
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A+++ M+ + + P+ Y ++I LC G + A + ++ K VP+ T
Sbjct: 317 GELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTY 376
Query: 365 SALLEGLKKNNQ 376
+ L+ G + ++
Sbjct: 377 TTLINGFTQADR 388
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ I C+ G + +A + EM++ G PD TY LI+ KD + E+G L
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P + T+ I R A ++ M+ GI P+ VTY +I+G C
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 305 GHLDMAKKVYSAM--LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G ++ A V M G PN Y +IH LCQ+G F + + + P+
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 363 TISALLEGL 371
T +AL+ GL
Sbjct: 270 TYTALIHGL 278
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++NI+I C+ L+ +M EMQ G P V+TYTTLI F R + +
Sbjct: 125 DSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDIL 184
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVIKGFC 302
+ M +G PN T+ IQ L + +A ++ M+ G E P+ VTY +I G C
Sbjct: 185 DEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLC 244
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G +M + M+ PN Y +IH LCQ+G F A ++ + + V
Sbjct: 245 QKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304
Query: 363 TISALLEGLKK 373
++L++GL K
Sbjct: 305 IYNSLIDGLCK 315
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I C+ G +A +++ EM +G + DV+ Y +LI K + + LM
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V KG P++ T+ IQ L + +A LM M+ GI P+ VTY +I GF ++
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
D A ++ + M LMP IY+ + L
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 1/175 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G+ + M+ +M + GC + A + L + L E+ + D+
Sbjct: 245 QKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMV-AIGCELDV 303
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I C+MG LD A + + M + GV PDV TYT+LI + GL
Sbjct: 304 VIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE 363
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M KG PN T+ I R+ A +L+ M+ G+ P Y ++ K
Sbjct: 364 MRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 41/83 (49%)
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+ D ++Y+ I G C+ G + A +++ M + P+ Y +I+ LC++ +
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 348 MCKDSMKKNWVPSVDTISALLEG 370
+ + + + P+V T + L+ G
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHG 170
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A+ +K E+DP+ +F + N + + +LA F ++ +L HQ +
Sbjct: 96 AIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVL-HQMTY 154
Query: 110 PQGR-REGFIMRIMMLYGKAGMIKHAMDTFYDMH-LYGCKRTVKSLNAALKVLTESRDLK 167
+ EG + +M + K+ + + + ++ + + K + K+L+ L +L +S +
Sbjct: 155 ETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVD 214
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTT 226
+ L+ + ++ FNI++K C+ G LD A+ ++ EM+ P+++TY+T
Sbjct: 215 LARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYST 274
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
L+ ++ R + L+ MV + P+ T+NV I + +A ++ M+
Sbjct: 275 LMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSN 334
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G P+ Y+ ++ G C+ G L+ AK V + + G L P+ Y ++I++LC+ G + A
Sbjct: 335 GCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394
Query: 346 YIMCKDSMKKNWVPSVD-TISALLEGL 371
I + MK+N + T + LL GL
Sbjct: 395 -IELLEEMKENGCQADSVTFNVLLGGL 420
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 95/184 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++++ ++ C++G L+ A V+ E++ G+KPD +TYT+LI+ ++ + + L
Sbjct: 339 NVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELL 398
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC + TFNV + L + + +A ++ + + G+ ++ +Y +V+ +
Sbjct: 399 EEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQK 458
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L AK++ ML R P+ ++ LC+ G + A + D ++ + P ++T
Sbjct: 459 CELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETW 518
Query: 365 SALL 368
L+
Sbjct: 519 EVLI 522
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G A + M GC V + +A + L + L+ + L E+ ++
Sbjct: 315 FCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGS-GLKP 373
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C G D+A ++ EM++ G + D +T+ L+ ++ + E +
Sbjct: 374 DAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMV 433
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G + N ++ + + L K +A +L+GLM R G +P T N ++ C++
Sbjct: 434 EKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKA 493
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G +D A ++ P + ++ +I +C+E
Sbjct: 494 GMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRE 528
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A T +M V + N + L ++R + F +PE D+
Sbjct: 22 RTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP-----DV 76
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ C+ G + +A + M+ G+ P +TYTTLI F K + E GL L
Sbjct: 77 VTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQL 136
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + C P + ++ I L R+ QA +L M+ G +PD VTYN +I G C
Sbjct: 137 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 196
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L AK + + M+ P++ + +I LC A+++ + K+ P + T +
Sbjct: 197 LHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 256
Query: 367 LLEGL 371
L+ L
Sbjct: 257 LVSKL 261
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 34/279 (12%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F +M L GCK + N + L + L + L + E Q D +F
Sbjct: 162 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN-SFQPDKITFT 220
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS--AFYKDNRP----------- 237
+I+ C + +A+++ M K G PD++T+T L+S + RP
Sbjct: 221 ALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPAC 280
Query: 238 ------------EIGNG--------LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
E+G L M +G PN+ T+ + L + + +A +
Sbjct: 281 PEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYR 340
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
M GIEPD V YN+++ GFC++ LDMA+K+ M L PN Y T++ + C
Sbjct: 341 EFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHC 400
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
++G + + + P V T S L+ GL + Q
Sbjct: 401 RKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQ 439
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ ++KA C G +DKA + EM + + PDV TY +I K R +
Sbjct: 11 LSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFET 70
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M P++ T+N + L R QA L G M+ GI P +VTY +I FC+
Sbjct: 71 MP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQ 126
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + M R+ P Y ++I+ LC+ + AY + ++ P T +
Sbjct: 127 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 186
Query: 367 LLEGL 371
L+ GL
Sbjct: 187 LIHGL 191
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
KP+ ++Y L+ A + + + M + P++ T+NV I L RR +A +
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
M EPD VTYN ++ G C++G + A ++ +M G + P+ Y T+I C
Sbjct: 67 FFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ F AY + + + P+V + +++ GL KN +
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRK 161
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 19/302 (6%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKH 133
++ + + + + L ARR I +E +++P+ + +L G K G +
Sbjct: 41 LVPDVFTYNVVIDTLCKARR---ISRAIEFFETMPE---PDVVTYNTLLGGLCKNGRVAQ 94
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F M G + + + V + + L + + ++S+ +I
Sbjct: 95 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASR-KCSPTVYSYCSII 153
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ +D+AY + EM+ G KPD +TY TLI R L +MV
Sbjct: 154 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQ 213
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ TF I+ L R +A L M + G PD VT+ +++ C + +K+
Sbjct: 214 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLC------IRRKL 267
Query: 314 YSAMLGRRLMPNRK----IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+ R P +Y + L + F+ A + + ++ P+V T +A +
Sbjct: 268 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFK 327
Query: 370 GL 371
GL
Sbjct: 328 GL 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+AY M + G++PD++ Y L+ F K NR ++ + M G PN+ T+N +
Sbjct: 337 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLV 396
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
H K + +L+ M G +PD T++ ++ G R G +D A
Sbjct: 397 GHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAA 443
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + GKA A++ F TV+ NA + V + +Q L+++
Sbjct: 194 ILSVLGKANQEALAVEIFARAEA-ASGNTVQVYNAMMGVYARTGRFTKVQE-LLDLMRSR 251
Query: 181 HIQFDIFSFNIVIKAFCEMG--ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ D+ SFN +I A + G + + A ++ E+++ G++PD+ITY TLISA +++ E
Sbjct: 252 GCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLE 311
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++N MV C P+L T+N I S +A +L ++ G PD VTYN ++
Sbjct: 312 EAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLL 371
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F R G++D K++ M+ + Y T+IH + G +LA+ + D
Sbjct: 372 YAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRS 431
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMA 385
P T + L++ L K N +A +M+
Sbjct: 432 PDAVTYTVLIDSLGKANMIKEAAEVMS 458
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 1/219 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +YG+ GM + A F D+ G + N+ L ++ ++ ++ K
Sbjct: 335 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV-KM 393
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D ++N +I + + G D A+ + +M+ G PD +TYT LI + K N +
Sbjct: 394 GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 453
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + M+ P L TF+ I + +A + M R GI+PD + Y++++
Sbjct: 454 AEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDI 513
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
R A K+Y M+ P+ +Y+ M+ L +E
Sbjct: 514 LLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKE 552
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 118 IMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ RIM+ L K ++ +M + K + N+ LK+ T D K +
Sbjct: 889 LYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLI 948
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E ++ D ++N +I +C ++ +M EM+++G++P + TY +LISAF K
Sbjct: 949 QEA-GLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQM 1007
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L+ ++ K C + + +++ ++ N +A KL+G+M+ G+EP T +L
Sbjct: 1008 VEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHL 1067
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++ + SG + A+KV + L + Y ++I + GD N+A
Sbjct: 1068 LMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVA 1116
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ + DM + C+ + + NA + V + ++ K + D ++N
Sbjct: 310 LEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLP-DAVTYN 368
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ AF G +DK + +M K+G D +TY T+I + K + ++ L++ M
Sbjct: 369 SLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS 428
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T+ V I L +A ++M M ++P T++ +I G+ ++G A
Sbjct: 429 GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEA 488
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + ML + P+ Y M+ L + + A + ++ + ++ P +L
Sbjct: 489 EETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRV 548
Query: 371 LKKNNQ 376
L K N+
Sbjct: 549 LGKENR 554
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLWNL 246
S N +++A G LD+ Y+V+ E+Q +G K + T ++ AF + N E+ ++
Sbjct: 819 SVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKK-IYQG 877
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G FP + + + I L +R ++ M+ +PD +N V+K + G
Sbjct: 878 MKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGD 937
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+VY + L P+ Y T+I C++ + + + P +DT +
Sbjct: 938 FKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKS 997
Query: 367 LLEGLKK 373
L+ K
Sbjct: 998 LISAFGK 1004
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A + +M+ GV+P Y +++ + K PE + L + KG + + + +
Sbjct: 694 EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGV 753
Query: 264 QHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
K + WQ A L+G +++ D +N +I + SG + A+ +++ M+
Sbjct: 754 IEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP 813
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P ++ L +G + Y++ ++ + S +I+ +L+
Sbjct: 814 SPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAF 862
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAF-----YKDNRPEIGN- 241
+ ++ +C+MG + A+ ++ + ++ G+ DV +T +I A+ ++ +G+
Sbjct: 714 YRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSL 773
Query: 242 ---------GLWNLMV----CKGCF----------------PNLATFNVRIQHLVNKRRS 272
+WN ++ GC+ P + + N +Q L+ R
Sbjct: 774 RQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRL 833
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ ++ +Q G + + + L++ F +G++ KK+Y M P +Y+ M
Sbjct: 834 DELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIM 893
Query: 333 IHYLCQ 338
I L +
Sbjct: 894 IGLLAK 899
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +N+V+ C++G L++A ++ +M GV PD +TYT++I A ++ R G ++
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P++ T+ V I K R +A MQ GI P+ +TYN +I G C+
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ M+ + + PN+ Y +I+ C G++ A + K + + P T
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692
Query: 365 SALLEGLKKNNQPCKANTI 383
SALL+ L K+ CK +
Sbjct: 693 SALLKQLGKD---CKLQAV 708
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +Y K M++ + F M VK+ N L++L + +DL + + +F
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRD-KDLMSKAVEVYRTMGEF 228
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ I ++N ++ ++C+ G + + ++ EMQ+ G P+ +TY LI+ K E
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL M+ G + T+N I NK +A L M G P TYN I G
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G + A + S ML L+P+ Y T+I+ C+ G+ A+++ + P+
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 361 VDTISALLEGLKKNNQ 376
+ T + LL+GL + +
Sbjct: 409 IVTYNTLLDGLCRQGE 424
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L L +L+ Q +E+ + I DI ++ I++ C+MG L A
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM G++ D Y T I K L M+ KG P+L +NV + L
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+A++L+ M G+ PD VTY +I +G L ++++ ML + L P+
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Y +IH +G A+I + +K +P+V T ++L+ GL K
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEK 179
++YG GM+ A+ +M L G TV + N+ + L + R A+Q +
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN- 368
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D+ S+N +I +C +G L KA+L+ E++ + + P ++TY TL+ + E+
Sbjct: 369 -NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 427
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQ--------------------------------HLV 267
L M+ +G P++ T+ + + +V
Sbjct: 428 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 487
Query: 268 NKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + ++ L + G PD + YN+V+ G C+ G+L+ A ++ M+ ++P
Sbjct: 488 GELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ Y ++IH + G + + + K PSV T + L+ G
Sbjct: 548 DYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D +++ I ++G +A+ + EM G PD+I Y ++ K E +
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L MV G P+ T+ I + R + ++ M G+ P VTY ++I G
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
G L+ A +S M + ++PN Y ++I+ LC+ + AY + ++K P+
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 109 LPQGRREGFIMRIMMLYGKAGM--IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
L +G + ++++G AG ++ A F +M G V + N+ + L + R +
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM 635
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
F E+ EK I + +S+ I+I C MG +A + +M GV+PD T++
Sbjct: 636 DQAYNFFAEMVEK-GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694
Query: 227 LISAFYKD 234
L+ KD
Sbjct: 695 LLKQLGKD 702
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ + + + L + D+ AF L+ E I+ D+ FN +I + C+ +D
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDL--AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + EM+ G++P+V+TY++LIS R + L + M+ K PNL TFN I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
V + + +A KL M + I+PD TYN +I GFC LD AK+++ M+ +
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ Y T+I C+ + ++ + V T + L++GL
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ EK I ++ +FN
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFN 259
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G +A + +M K + PD+ TY +LI+ F +R + ++ MV K
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFP+L T+N I+ +R +L M G+ D VTY +I+G G D A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVDTISALLE 369
+KV+ M+ + P+ Y ++ LC G A + D M+K+ + + + ++E
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA-LEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 370 GLKKNNQPCKANTI 383
G+ CKA +
Sbjct: 439 GM------CKAGKV 446
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + A L+ M+ IE D V +N +I C+
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A ++ M + + PN Y ++I LC G ++ A + D ++K P++ T +
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 260 ALIDAFVKEGKFVEAEKL 277
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 169 IQAFLME----VPEKFH-------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
I AF+ E EK H I DIF++N +I FC LDKA + M
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD+ TY TLI F K R E G L+ M +G + T+ IQ L + A K
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ M G+ PD +TY++++ G C +G L+ A +V+ M + + IY TMI +C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 338 QEGDFNLAY-IMCKDSMKKNWVPSVDTISALLEGL 371
+ G + + + C S+ K P+V T + ++ GL
Sbjct: 442 KAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGL 475
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I +++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 32 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 91
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 92 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G +D+A + + M ++ + I+ T+I LC+ + A + K+
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ ++++++
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ ++ + EM G+ D +TYTTLI + D + ++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + +A ++ MQ+ I+ D Y +I+G C++
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D ++ ++ + + PN Y TMI LC + AY + K + +P T
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 504 NTLIRAHLRDGDKAASAELI 523
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 101/194 (52%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +V+ C+ G +D A+ ++ +M+ ++ DV+ + T+I + K +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L + R A++L+ M I P+ VT+N +I F
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G A+K++ M+ R + P+ Y ++I+ C + A M + + K+ P +D
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 363 TISALLEGLKKNNQ 376
T + L++G K+ +
Sbjct: 327 TYNTLIKGFCKSKR 340
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF FN ++ A +M D + +MQ+LG+ ++ TY LI+ F + ++ + L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T + + + +R A L+ M G PD +T+ +I G
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
A + M+ R PN Y +++ LC+ GD +LA+
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F + +K I+ DI+ + +I+ C+ G +D + + + GVKP+V+TY T
Sbjct: 413 KALEVF--DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+IS + L M G P+ T+N I+ HL + ++ A
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + + L+SA K + ++ L M G NL T+N+ I + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G M + G EP VT + ++ G+C + A + M+ P+ + T+IH L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ A + +++ P++ T ++ GL K
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ FN + + ++ L MQR GI + TYN++I FCR + +A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ M+ P+ ++++ C + A + ++ + P T + L+ GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 373 KNNQPCKANTIMALVQRRV 391
+N KA+ +ALV R V
Sbjct: 127 LHN---KASEAVALVDRMV 142
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI---------------- 222
K + D++SF I+IK CE G ++K++ +++E+ + G P+V+
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 223 -------------------TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
TYT LI+ +K+ + G ++ M G FPNL T+N +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R+ A ++ M+ G+ + VTYN +I G CR L+ A KV M +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL-KKNNQPCKANT 382
PN Y T+I C G A +C+D + PS+ T + L+ G +K + A
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 383 IMALVQRRV 391
+ + +R +
Sbjct: 396 VKEMEERGI 404
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G K A F +M G + + N + L L + ++ I ++
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNL 338
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I FC +G L KA + +++ G+ P ++TY L+S F + +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+ T+ + I +A +L M+ G+ PD TY+++I GFC G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A +++ +M+ + PN IY TMI C+EG A + K+ +K P+V +
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 367 LLEGLKKNNQPCKANTIM 384
++E L K + +A ++
Sbjct: 519 MIEVLCKERKSKEAERLV 536
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 3/255 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFD 185
K G+ K + + M G + + N + L + R A Q F E+ E+ + +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF-DEMRER-GVSCN 302
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N +I C L++A V+ +M+ G+ P++ITY TLI F + L
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +G P+L T+N+ + K + A K++ M+ GI+P +VTY ++I F RS
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+++ A ++ +M L+P+ Y +IH C +G N A + K ++KN P+ +
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 366 ALLEGLKKNNQPCKA 380
++ G K +A
Sbjct: 483 TMILGYCKEGSSYRA 497
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM-EVPEKFHIQFD 185
K G I+ A D F++M G ++ + L ++ K Q F M E ++ + +
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK--QGFEMYEKMQEDGVFPN 267
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++N V+ C+ G A+ V EM++ GV +++TY TLI ++ + N + +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PNL T+N I + +A L ++ G+ P VTYN+++ GFCR G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTI 364
A K+ M R + P++ Y +I + + A I + SM++ VP V T
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA-IQLRLSMEELGLVPDVHTY 446
Query: 365 SALLEGL 371
S L+ G
Sbjct: 447 SVLIHGF 453
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + A+ D+ G ++ + N + D + E+ E+ I+
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER-GIKPSKV 409
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ I+I F ++KA + + M++LG+ PDV TY+ LI F + + L+ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V K C PN +N I + S++A KL+ M+ + P+ +Y +I+ C+
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 308 DMAKKVYSAMLGRRLMPNRKI 328
A+++ M+ + P+ I
Sbjct: 530 KEAERLVEKMIDSGIDPSTSI 550
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KAIQ L E+ + D+ +++++I FC G +++A + M + +P+ + Y T
Sbjct: 426 KAIQLRLS--MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I + K+ L M K PN+A++ I+ L +R+S +A +L+ M G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 287 IEPDEVTYNLV 297
I+P +L+
Sbjct: 544 IDPSTSILSLI 554
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y +I+++ + + +N MV G P FN + +V Q
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN-EN 155
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ + D ++ ++IKG C +G ++ + + + PN IY T+I C++G+
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
A + + K V + T + L+ GL KN
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKN 246
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + + K P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KFTYTTLIDGCCKEGD 332
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ + R
Sbjct: 382 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHR 415
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ M R G P VTYN+++ G
Sbjct: 378 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A T +M V + N + L ++R + F +PE D+
Sbjct: 47 RTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP-----DV 101
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ C+ G + +A + M+ G+ P +TYTTLI F K + E GL L
Sbjct: 102 VTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQL 161
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + C P + ++ I L R+ QA +L M+ G +PD VTYN +I G C
Sbjct: 162 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 221
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L AK + + M+ P++ + +I LC A+++ + K+ P + T +
Sbjct: 222 LHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 281
Query: 367 LLEGL 371
L+ L
Sbjct: 282 LVSKL 286
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 34/274 (12%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F +M L GCK + N + L + L + L + E Q D +F
Sbjct: 187 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN-GFQPDKITFT 245
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS--AFYKDNRP----------- 237
+I+ C + +A+++ M K G PD++T+T L+S + RP
Sbjct: 246 ALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPAC 305
Query: 238 ------------EIGNG--------LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
E+G L M +G PN+ T+ + L + + +A +
Sbjct: 306 PEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYR 365
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
M GIEPD V YN+++ GFC++ LDMA+K+ M L PN Y T++ + C
Sbjct: 366 EFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHC 425
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++G + + + P V T S L+ GL
Sbjct: 426 RKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
+ NA L +L +R + I + + + + S+ ++KA C G +DKA + E
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQ-DCKPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + + PDV TY +I K R + M P++ T+N + L R
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
QA L G M+ GI P +VTY +I FC+ + A + M R+ P Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I+ LC+ + AY + ++ P T + L+ GL
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 123/302 (40%), Gaps = 19/302 (6%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKH 133
++ + + + + L ARR I +E +++P+ + +L G K G +
Sbjct: 66 LVPDVFTYNVVIDTLCKARR---ISRAIEFFETMPE---PDVVTYNTLLGGLCKNGRVAQ 119
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F M G + + + V + + L + + ++S+ +I
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASR-KCSPTVYSYCSII 178
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ +D+AY + EM+ G KPD +TY TLI R L +MV G
Sbjct: 179 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQ 238
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ TF I+ L R +A L M + G PD VT+ +++ C + +K+
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLC------ILRKL 292
Query: 314 YSAMLGRRLMPNRK----IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+ R P +Y + L + F+ A + + ++ P+V T +A +
Sbjct: 293 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFK 352
Query: 370 GL 371
GL
Sbjct: 353 GL 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN----------LMVCKG 251
D+A ++ +M + GV P+V+TYT AF+K G G W M+ +G
Sbjct: 325 FDRAARLLQKMARRGVPPNVVTYT----AFFK------GLGDWKEGMRAYREFRRMLEQG 374
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P++ +NV + R A K++ M + G+ P+ VTYN ++ CR G ++
Sbjct: 375 IEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIG 434
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
++ M+ R P+ + T++ L G + AY
Sbjct: 435 ELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAY 469
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 31/186 (16%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+T L+ + R E ++ + + C PN ++ ++ L + +A +
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 282 MQRFGIEPDEVTYNLVIK-------------------------------GFCRSGHLDMA 310
M R + PD TYN+VI G C++G + A
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQA 120
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ +M G + P+ Y T+I C+ F AY + + + P+V + +++ G
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180
Query: 371 LKKNNQ 376
L KN +
Sbjct: 181 LCKNRK 186
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + K+ ++ + SFN ++ + +G LD+ + + M GV+PDV TY
Sbjct: 151 DIRVAQSVFNAIT-KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTY 209
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN TF I R A ++ M
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G CR G L A+ + M + L P++ Y T+I C+EGD
Sbjct: 270 QSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLET 329
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A ++
Sbjct: 330 AFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVL 369
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V+++ TL++ + + + G L
Sbjct: 136 LYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKT 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 316 TLIDGXCKEGD 326
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +M + K G I+ A F + +G + +V S N + DL + F ++
Sbjct: 138 FFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKT 195
Query: 177 P-EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG + A + ++ +
Sbjct: 316 TLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 376 GLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 105 HQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
+++ L Q I ++YG + G +K A D +M + G K + + +
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCK 323
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
DL+ + ++ +IQ D + +I C+ G A V+ EM +G+KPD I
Sbjct: 324 EGDLETAFEHRKRMIQE-NIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTI 382
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
TYT +I+ F K G+ L M G P++ T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ + + + L + D+ AF L+ E I+ D+ FN +I + C+ +D
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDL--AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + EM+ G++P+V+TY++LIS R + L + M+ K PNL TFN I
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
V + + +A KL M + I+PD TYN +I GFC LD AK+++ M+ +
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y T+I C+ + ++ + V T + L++GL + A +
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381
Query: 384 M-ALVQRRVP 392
+V VP
Sbjct: 382 FKQMVSDGVP 391
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ EK I ++ +FN
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFN 258
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G +A + +M K + PD+ TY +LI+ F +R + ++ MV K
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFP+L T+N I+ +R +L M G+ D VTY +I+G G D A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVDTISALLE 369
+KV+ M+ + P+ Y ++ LC G A + D M+K+ + + + ++E
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA-LEVFDYMQKSEIKLDIYIYTTMIE 437
Query: 370 GLKKNNQPCKANTI 383
G+ CKA +
Sbjct: 438 GM------CKAGKV 445
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + A L+ M+ IE D V +N +I C+
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A ++ M + + PN Y ++I LC G ++ A + D ++K P++ T +
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 259 ALIDAFVKEGKFVEAEKL 276
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 169 IQAFLME----VPEKFH-------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
I AF+ E EK H I DIF++N +I FC LDKA + M
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD+ TY TLI F K R E G L+ M +G + T+ IQ L + A K
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ M G+ PD +TY++++ G C +G L+ A +V+ M + + IY TMI +C
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440
Query: 338 QEGDFNLAY-IMCKDSMKKNWVPSVDTISALLEGL 371
+ G + + + C S+ K P+V T + ++ GL
Sbjct: 441 KAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGL 474
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ ++ + EM G+ D +TYTTLI + D + ++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + +A ++ MQ+ I+ D Y +I+G C++
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D ++ ++ + + PN Y TMI LC + AY + K + +P T
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 503 NTLIRAHLRDGDKAASAELI 522
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 186 IFSFNIVIKAFCEMGILDK--AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
IF FN ++ A +M D + ++ +M KLG +P ++T ++L++ + R L
Sbjct: 42 IFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 101
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ MV G P+ TF I L ++ +A L+ M + G +P+ VTY +V+ G C+
Sbjct: 102 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 161
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +D+A + + M ++ + I+ T+I LC+ + A + K+ K P+V T
Sbjct: 162 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 221
Query: 364 ISALLEGLKKNNQPCKANTIMA-LVQRRV 391
S+L+ L + A+ +++ ++++++
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIEKKI 250
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F + +K I+ DI+ + +I+ C+ G +D + + + GVKP+V+TY T
Sbjct: 412 KALEVF--DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+IS + L M G P+ T+N I+ HL + ++ A
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 519
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 136/261 (52%), Gaps = 2/261 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ +Y + G+ K+A+ F +M G +++S N+ L L ++ + ++ + +
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH-YVYQQMIRV 220
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+F +I++ AFC+ G +D+A + +M+ LGV+P+++TY +LI+ + E
Sbjct: 221 GIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAA 280
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIK 299
G+ M KG N+ T+ + I+ + + +A K++ G+ + + PDE Y ++I
Sbjct: 281 KGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLID 340
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G+CR+G +D A ++ ML L N I ++I+ C+ G+ + A + + N P
Sbjct: 341 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400
Query: 360 SVDTISALLEGLKKNNQPCKA 380
+ + LL+G + +A
Sbjct: 401 DSYSYNTLLDGYCREGHTSEA 421
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 150/314 (47%), Gaps = 18/314 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMIK 132
R +++ F +S L + E + + K L +G R ++ Y KA +
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP-DGITYRTLIDGYCKASNVG 559
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A M +++ N+ + L +SR L + L E+ + + +I ++ +
Sbjct: 560 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGAL 618
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +C+ G+LDKA+ EM + G+ ++I +T++S Y+ R + N L MV G
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678
Query: 253 FPNLATF---NVR---IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
FP+ F ++R IQ + A+ L + F + P+ + YN+ I G C++G
Sbjct: 679 FPDHECFLKSDIRYAAIQKI--------ADSLDESCKTF-LLPNNIVYNIAIAGLCKTGK 729
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A++ +S + + +P+ Y T+IH G+ + A+ + + +++ VP++ T +A
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 367 LLEGLKKNNQPCKA 380
L+ GL K+ +A
Sbjct: 790 LINGLCKSENVDRA 803
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + ++N ++K C +G D A + M K GV PD + Y+TL+ +K E +
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 492
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW ++ +G + TFN I L + +A ++ M+ G PD +TY +I G+
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ ++ A KV AM + P+ ++Y ++I L + + + + P++
Sbjct: 553 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 612
Query: 362 DTISALLEGLKKNNQPCKA 380
T AL++G K KA
Sbjct: 613 VTYGALIDGWCKEGMLDKA 631
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G ++ A M G R V + +K + + + L + E+ +
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ ++I +C G +D A ++ EM +LG+K ++ +LI+ + K G+
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV P+ ++N + + + +A L M + GIEP +TYN ++KG CR
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A +++ M+ R + P+ Y T++ L + +F A + KD + + + S T
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510
Query: 365 SALLEGLKKNNQPCKANTI 383
+ ++ GL K + +A I
Sbjct: 511 NTMISGLCKMGKMVEAEEI 529
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+NI I C+ G +D A + G PD TY TLI + + L + M+
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ T+N I L +A +L + + G+ P+ VTYN +I G+C+ G++D
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
A K+ M+ + P+ Y +I+ LC+ GD
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 126/262 (48%), Gaps = 3/262 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G I A+ +M G K + N+ + + ++ + + + + ++++
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-WNLKP 400
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S+N ++ +C G +A+ + +M + G++P V+TY TL+ + + +W
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM+ +G P+ ++ + L A+ L + G +T+N +I G C+
Sbjct: 461 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
G + A++++ M P+ Y+T+I C+ + A+ + K +M++ + PS++
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV-KGAMEREPISPSIEM 579
Query: 364 ISALLEGLKKNNQPCKANTIMA 385
++L+ GL K+ + + ++
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLT 601
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S N ++ + G A+ V +M ++G+ PDV + +++AF KD + + G M
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN+ T++ I V+ A ++ M G+ + VTY L+IKG+C+ +
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 312
Query: 308 DMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A+KV M L+P+ + Y +I C+ G + A + + ++ ++ ++
Sbjct: 313 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 372
Query: 367 LLEGLKKNNQPCKANTIMA 385
L+ G K + +A ++
Sbjct: 373 LINGYCKRGEIHEAEGVIT 391
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 70/133 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I C+ +D+A + ++ + G+ P+V+TY TLI + K + L
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P++ T++ I L ++ KL+ M + G++ + Y +++G+ RS
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRS 902
Query: 305 GHLDMAKKVYSAM 317
G + K+Y M
Sbjct: 903 GEMQKIHKLYDMM 915
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F++++K + E G+ A V M K G P + + +L++ K+ + ++ M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ ++ + + +A + M+ G+EP+ VTY+ +I G+ G ++
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
AK V M + + N Y +I C++
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+L + N + +LV + A+ + M R GI PD ++++ FC+ G +D A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
M + PN Y ++I+ GD A + K +K +V T + L++G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 371 LKKNNQPCKANTIMALVQ 388
K + +A ++ +Q
Sbjct: 306 YCKQCKMDEAEKVLRGMQ 323
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I A++ + M C+ + N + L + ++A L V + D+
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE-LARVLTSKGVLPDV 407
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I+ C + A + EM++ G PD TY+ LI + + R + L
Sbjct: 408 CTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE 467
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC N+ +N I L R A + M+ G+ VTYN +I G C+S
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ M+ L P++ Y TM+ Y CQ+GD A + ++ P + T
Sbjct: 528 VEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+ GL K + A+ ++ VQ +
Sbjct: 588 LIGGLCKAGRVDVASKLLRSVQMK 611
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 146/353 (41%), Gaps = 36/353 (10%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR 113
L+ + D LF+ + + F + + +LA A FD + LL S
Sbjct: 66 LRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPV 125
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDM--HLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
E + + Y + + ++ + + + K + N AL +L ++ LK ++
Sbjct: 126 DESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVET 185
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
++ + D+ +FNI+I+A C+ L A L++ +M G++PD T+TTL+ F
Sbjct: 186 LHSKMVAD-AVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGF 244
Query: 232 YKDNRPEIGNGLWNLMVCKGC---------------------------------FPNLAT 258
++ E + LMV GC P+ T
Sbjct: 245 IEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVT 304
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN + L Q ++M M G E D TYN +I G C+ G +D A ++ M+
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMV 364
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R PN Y T+I LC+E A + + K +P V T ++L++GL
Sbjct: 365 SRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGL 417
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 4/266 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ F +M GC + + ++ L R LK L E+ E ++ +N +I
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM-ELSGCARNVVVYNTLI 484
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ + A + +M+ LGV +TY TLI+ K R E L + M+ +G
Sbjct: 485 DGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK 544
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+ +++ + +A ++ M G EPD VTY +I G C++G +D+A K+
Sbjct: 545 PDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKL 604
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ + ++ + Y +I LC+ A + ++ M+K P V T + GL
Sbjct: 605 LRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCN 664
Query: 374 NNQPCKAN---TIMALVQRRVPHFSS 396
P + T+ L + +P F S
Sbjct: 665 GGGPIQEAVDFTVEMLEKGILPEFPS 690
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I+ A+ Y+ + C V + NA + L + +K + + EK + D+
Sbjct: 281 KEGRIEEALRFIYEEEGF-CPDQV-TFNALVNGLCRTGHIKQGLEMMDFMLEK-GFELDV 337
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I C++G +D+A ++ M +P+ +TY TLI K+N E L +
Sbjct: 338 YTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARV 397
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P++ TFN IQ L A +L M+ G +PDE TY+++I+ C
Sbjct: 398 LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE---GDFNLAYIMCKDSMKKNWVP-SVD 362
L A + M N +Y T+I LC+ GD + D M+ V S
Sbjct: 458 LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF----DQMEMLGVSRSSV 513
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T + L+ GL K+ + +A +M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLM 535
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 105/191 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G L +
Sbjct: 138 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 197
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 198 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 257
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 258 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 317
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 318 TLIDGCCKEGD 328
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 140 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 197
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 198 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 257
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 258 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 317
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 318 TLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 377
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P+ T + ++ K K + ++ +QR
Sbjct: 378 GLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQR 411
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 255 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK-GLKPDK 313
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + + D + YT LIS ++ R +
Sbjct: 314 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLRE 373
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G PN T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 374 MLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 5/249 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFD 185
+AG I A+ F DM C TV++ + L+ S R ++A+ F E+ EK + +
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF-NEMKEK-GCEPN 333
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++I C+ +D+A ++ EM + G+ P V+TY LI + K+ + + +
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
LM C PN T+N I L KR+ +A L+ M + P +TYN +I G C+
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI- 364
L+ A ++ S M L+P++ Y I LC+EG A + DS+K V + + I
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF-DSVKAKGVKANEVIY 512
Query: 365 SALLEGLKK 373
+AL++G K
Sbjct: 513 TALIDGYCK 521
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 130/269 (48%), Gaps = 2/269 (0%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ + I L G +G A++ F +M GC+ V + + L + + + L E+
Sbjct: 302 YTVLIYALSG-SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
EK I + ++N +I +C+ G++D A+ ++ M+ P+ TY LI K +
Sbjct: 361 SEKGLIP-SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
L N M+ + P+L T+N I A +L+ LM G+ PD+ TY++
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
I C+ G ++ A ++ ++ + + N IY +I C+ G ++AY + + +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMA 385
+P+ T + L+EGL K + +A++++A
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVA 568
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
A + FL+ +P+K Q + S+ +I CE G +++A + +M + P V TYT L
Sbjct: 248 AYEVFLI-MPQK-GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I A R L+N M KGC PN+ T+ V I L + + +A K++ M G+
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P VTYN +I G+C+ G +D A ++ M PN + Y +I LC++ + A
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ +++ PS+ T ++L+ G K N A +++L+
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ +A + F M GC+R S + L E+ + ++ E + + ++
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-NCCPTVRTYT 303
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I A G +A + EM++ G +P+V TYT LI K+N+ + + + M K
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T+N I + A +++ LM+ P+ TYN +I G C+ + A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + ML R+L P+ Y ++IH C+ D AY + + VP T S ++
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 371 LKKNNQPCKANTIMALVQRR 390
L K + +A T+ V+ +
Sbjct: 484 LCKEGRVEEAGTLFDSVKAK 503
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 42/308 (13%)
Query: 104 EHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E +K L + +G I ++ Y K GMI A + M C ++ N +
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
L + R + A L ++ E+ + + ++N +I C++ L+ AY ++ M + G+
Sbjct: 412 CGLCKKRKVHKAMALLNKMLER-KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-------------------------- 251
PD TY+ I K+ R E L++ + KG
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530
Query: 252 ---------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
C PN T+NV I+ L +++ +A+ L+ M G++P VTY ++I
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G D A KV++ M+ P+ Y +H +G + ++ +P +
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV 650
Query: 363 TISALLEG 370
T + L++G
Sbjct: 651 TYTVLIDG 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 41/296 (13%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
K T++ N L L++ + ++ +E+ I +I++FN ++ +C++G + +A
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNN-QISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG--------------- 251
L ++ + G+ PD TYT+LI ++ + ++ +M KG
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 252 --------------------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
C P + T+ V I L R +A L M+ G EP+
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TY ++I G C+ +D A+K+ S M + L+P+ Y +I C+EG + A+ + D
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-D 393
Query: 352 SMKKNWV-PSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
M+ N P+ T + L+ GL K + KA MAL+ + + S L + S++
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKA---MALLNKMLERKLSPSLITYNSLI 446
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N++I+ C+ + +A ++ +M +GVKP V+TYT LI KD + ++N
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P++ T+ + ++ + + ++ M GI PD VTY ++I G+ R G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A M+ P+ I +I L E
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I +C++G +D AY ++ M P+ TY LI K+ + + + L M+
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P + T+ + I ++ A K+ M G +PD TY + + G L+
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
V + M ++P+ Y +I + G + A+ K + PS+ +S L+
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 369 EGLKKNNQ 376
+ L N+
Sbjct: 692 KNLSHENR 699
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 34/299 (11%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
N + N Y + + L ++ L+ K L G + + +++ K G
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLV--AKMLTMGVKPTVVTYTILIGEMLKDGA 594
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
HA+ F M G + V + A L L+ + + ++ E+ I D+ ++
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE-GILPDLVTYT 653
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------------- 237
++I + +G+ +A+ + M G KP + + LI +NR
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 238 ----------------EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
EI L+ MV GC +++ + I + R +A L+
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M+ G+ P E YN ++ C+ G A ++ AM+ L+P + Y+ ++ L EG
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 832
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 125/340 (36%), Gaps = 31/340 (9%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D E ++L N +V +++ + + L R + L + K+ E
Sbjct: 454 DLESAYRLLSLMNENGLV-PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 119 MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
++ Y K G I A M C + N ++ L + + +K + + ++
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML- 571
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
++ + ++ I+I + G D A V M LG +PDV TYT + A++ E
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ + M +G P+L T+ V I + +A + M G +P +++I
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 299 KGFCRSGHL-----------------------------DMAKKVYSAMLGRRLMPNRKIY 329
K + ++A K++ M+ + IY
Sbjct: 692 KNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIY 751
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+I CQ+ A + ++ PS D ++LL+
Sbjct: 752 GALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGY-PASLYFFNILMHRFCKDGDIRIAQSVFDAITKW 154
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 155 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 214
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L P+ Y T+I+
Sbjct: 215 NELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K+
Sbjct: 275 LCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGD 315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 127 FFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 184
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 185 AMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNG 244
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 304
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + +Y +I LC+EG A M ++ +
Sbjct: 305 TLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSV 364
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 365 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 398
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 74 AIECYRLTREHKFWVPFD--TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNIL 131
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F KD I +++ + G P++ ++N + + + +L M G+
Sbjct: 132 MHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGV 191
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 192 QPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAME 251
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A+ ++
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 288
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK-GLKPDK 300
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + + D + YT LIS ++ +
Sbjct: 301 ITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLRE 360
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|449440241|ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 127 KAGMIKHAMDTFYDM--HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
K + HAM+ F M YG + SL A + + FL E+ +K
Sbjct: 191 KVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVLGFLEEMRQKGFCP- 249
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++ VIK F G+ A ++ +M+ G KPD++ YT +++ D ++ + L+
Sbjct: 250 AVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELF 309
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++ G P++ T+NV I L + S +++ M+ G +P+ +TYN+++K C++
Sbjct: 310 DELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNVITYNVILKSLCKT 369
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A+K+ S M + L N + ++ MI L G+ A ++ ++ + + P + T
Sbjct: 370 GELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEEMLGSRFPPQISTF 429
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
S +L L K + KA ++AL+
Sbjct: 430 SEILSWLCKRHMVGKAVELLALM 452
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 7/215 (3%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L+++T++ DL +ME+ EK + + +FN +I A+ G L+K + V+ +MQ+ G
Sbjct: 417 LEMVTKAEDL------VMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+K DVI++ +++ AF K+ + + + M+ K PN +N I + + QA
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAL 529
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L+ M+ G+ VTYNL++KG CRS +D A+++ + + L P+ Y T+I
Sbjct: 530 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 589
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
C +GD + A + ++ K P++ T L+ L
Sbjct: 590 CNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSAL 624
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 35/235 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+N+VI G A V EM +GV P+ ITY T+I K E G L
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+ M+ G PN+ T+NV + L R + LM M + PD TY
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312
Query: 295 -------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++++ G C+ G + AK+V+ ++ L+P IY
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I+ CQ D A+ + + ++ P T +AL+ GL K KA ++
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M+ A D +M G +V++ N + + L+ L ++ +K I+ D+ SF
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKSDVISF 477
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
V+KAFC+ G + +A ++ +M V P+ Y ++I A+ + E L M
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G ++ T+N+ ++ L + +A +L+ ++ G+ PD V+YN +I C G D
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A ++ M + P + T++ L G + + + + KN PS
Sbjct: 598 ALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPS 648
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--GVKPDVITYTTLISAFYKDNRPEIGNG 242
D F++N V++A G LD A ++ M + PD +Y +I+ ++ +
Sbjct: 156 DTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ MV G PN T+N I V +L M G +P+ VTYN+++ G C
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R+G +D + + M ++P+ Y + L + G+ + +S+KK +
Sbjct: 276 RTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335
Query: 363 TISALLEGLKKNNQPCKANTIMALV 387
T S LL GL K+ + KA + ++
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEML 360
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I +C++ L A+ + +M+ ++PD ITY LI+ K L M
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ TFN I + + ++ MQ+ GI+ D +++ V+K FC++G +
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M+ + + PN ++Y ++I + GD A ++ + S+ T + LL
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551
Query: 369 EGLKKNNQ 376
+GL +++Q
Sbjct: 552 KGLCRSSQ 559
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 11/230 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG ++ DM G K V S + +K ++ + A L ++ K +
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK-DVAP 507
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +N +I A+ E G ++A L++ +M+ GV ++TY L+ + ++ + L
Sbjct: 508 NAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G P++ ++N I NK + +A +L+ M ++GI P T + ++ +
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
G + + +Y ML + + P+ IY M+ AY+ C++ K
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVD----------AYVRCENDSK 667
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N+++ C G +D+ +M EM + PD TY+ L + + L+
Sbjct: 263 NVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLF 322
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG T ++ + L + +A ++ ++ G+ P V YN +I G+C+
Sbjct: 323 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQV 382
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M R + P+ Y +I+ LC+ A + + K PSV+T
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++ Q K T+++ +Q++
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQK 468
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 95/240 (39%), Gaps = 1/240 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G K V + N L L + + +A + E+ + D F+++I+ G
Sbjct: 259 GPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLP-DGFTYSILFDGLTRTGESQT 317
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
+ E K GV T + L++ KD + ++ ++V G P +N I
Sbjct: 318 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLIN 377
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
R A + M+ I PD +TYN +I G C+ + A+ + M + P
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 437
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + + T+I G + + D +K V + ++++ KN + +A I+
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-----PDEVTYNLVI 298
+ L+V G P+ +N +Q V + + + +++R G PD +YN+VI
Sbjct: 145 FGLLVAAGARPDTFAWNKVVQACV---AAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVI 201
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G RSG A KV+ M+ + PNR Y TMI + GD + + +
Sbjct: 202 AGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPK 261
Query: 359 PSVDTISALLEGLKKNNQ 376
P+V T + LL GL + +
Sbjct: 262 PNVVTYNVLLSGLCRTGR 279
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ Y ++G + A+ M G ++ + N LK L S + + + + +
Sbjct: 515 IIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ- 573
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ S+N +I A C G DKA ++ EM K G++P + T TL+SA R
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDM 633
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
L+ M+ K P+ + + + + V + L M GI D+
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 134/307 (43%), Gaps = 41/307 (13%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
A+ V LA ARR D+ L + + G +M ++ G +AG +K A + F
Sbjct: 117 AYSSLVRALAKARRVDHASSLFDEM--IRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M +GC Q ++ +N+++ C
Sbjct: 175 QMPKHGC------------------------------------QPNVPVYNVLLHGLCSS 198
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L++A + EM+ PDV+TY TL+ A K R E G L+ M G PN+ TF
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
+ I L +A ++ G M G +P++ TY +I G CR+ + A++++ M
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSVDTISALLEGLKKNNQPC 378
+ P+ Y ++I C+ G + A + ++ S P++ T + L++G K +
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378
Query: 379 KANTIMA 385
+AN ++A
Sbjct: 379 RANELVA 385
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+FN V++ F ++KA V M + G KPD ++Y LI K + + +
Sbjct: 44 DVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL 103
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P++ ++ ++ L RR A+ L M R G PD + + +I G C++
Sbjct: 104 SEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQA 163
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + + M PN +Y ++H LC G A + + + P V T
Sbjct: 164 GKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTY 223
Query: 365 SALLEGLKKNNQPCKANTI 383
+ LL+ + CKA +
Sbjct: 224 NTLLDAV------CKARRV 236
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+I ++F+++ +IK+ + +++Y V+ EM G PDV + ++ F + N E
Sbjct: 5 NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ MV G P+ ++++ I L + ++ K++ M G P Y+ +++
Sbjct: 65 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
++ +D A ++ M+ P+R ++ +I LCQ G A K K P+
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
V + LL GL + Q +ANT+ A ++ H S + + ++L
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMK---SHSCSPDVVTYNTLL 227
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQ-KLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I C+ G ++ A + +M G +P V+TY+TLI +D+ + G L
Sbjct: 65 VVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLL 124
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC PN T+N + L+ + RS +A L+ M G P+ +T+ L+IKG C+
Sbjct: 125 EEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKE 184
Query: 305 GHLDMAKKVYSA--MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G ++ A +V M+ L P+ + +++ LC+E A+ + K ++++ P+V
Sbjct: 185 GEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 244
Query: 363 TISALLEGLKKNNQ--------------PCKANTI 383
T S L++GL K + C+ANT+
Sbjct: 245 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 279
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V + + + L++ + L ++ E + + +++ V+ ++G ++
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE-LGCRANTVTYSTVVDGLLKVGRMED 296
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A +V+ +M+ G PD +TY TLI F+K R GL M+ G P++ T+
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM- 323
L R +A +++ M G P+ +TY+ ++ G C++G + A + M ++
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ Y +I LC+ G + AY + ++ +P V T S L+ GL
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 9/257 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF---- 184
G K A M GC + + +K L + +++A AF + V E F I+
Sbjct: 150 GRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA--AFRV-VDEMFMIESGLSP 206
Query: 185 DIFSFNIVIKAFC-EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ +FN V+ C E ILD A+ V + G +P+V+TY+TLI K + + L
Sbjct: 207 DVITFNSVLDGLCKEQRILD-AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 265
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV GC N T++ + L+ R A ++ M+ G PD VTYN +I GF +
Sbjct: 266 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 325
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
L A + ML P+ Y T+ H LC+ G F+ A + + P+ T
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 364 ISALLEGLKKNNQPCKA 380
S++++GL K + +A
Sbjct: 386 YSSIVDGLCKAGRVTEA 402
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 2/250 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GK +K A D F + GC TV + N + L + ++ ++ F +
Sbjct: 41 GKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPT 100
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +++ +I C +DK ++ EM G P+ +TY TL++A R + L
Sbjct: 101 VVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLE 160
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG--LMQRFGIEPDEVTYNLVIKGFCR 303
M GC P L TF + I+ L + A +++ M G+ PD +T+N V+ G C+
Sbjct: 161 QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ A V+ L R PN Y T+I L + + A + ++ + T
Sbjct: 221 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 280
Query: 364 ISALLEGLKK 373
S +++GL K
Sbjct: 281 YSTVVDGLLK 290
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I C+ +DKA + +M + PDV+TY LI K R + L+ KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ-RFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P + T+N I L R A L M FG P VTY+ +I G CR +D
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+ M GR PN Y T+++ L +G A+ + + P + T +++G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 371 LKKNNQ 376
L K +
Sbjct: 181 LCKEGE 186
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 4/259 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQFD 185
K G ++ A+ M GC + N + + + L+ L E+ E FH
Sbjct: 290 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS-- 347
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ + C G D+A ++ M G P+ ITY++++ K R G +
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407
Query: 246 LMVCKGCF-PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M P++ ++ I L + +A + + M R G PD VT++++I G C +
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D +++ M R +P+ Y T++ LC+ + A+ + + P T
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTR 527
Query: 365 SALLEGLKKNNQPCKANTI 383
++ GL + N+ A I
Sbjct: 528 RTMIHGLLEVNRDEDAKRI 546
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ A L E HI +D +I FC+ G +D A V ++M K G P V TYT+LI
Sbjct: 402 LDAMLSSGCEPNHIVYDA-----LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 456
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+KD R ++ + + M+ C PN+ T+ I L S +A KL+ LM+ G
Sbjct: 457 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 516
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ VTY +I G ++G +D++ +++ M + PN Y+ +I++LC G + A ++
Sbjct: 517 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 576
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKN 374
+ + W + ++G K+
Sbjct: 577 LGEMKQTYWPKYLQGYRCAIQGFSKS 602
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ VI C ++KA+L+ EM+ +GV PDV TYT LI +F K E L+
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P + T+ I + ++ QAN + M G P++VTY ++ G C++
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341
Query: 305 GHLDMAKKVYSAMLG----------------RRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G++ A +VY+ ++G L PN Y ++ LC+ + A+ +
Sbjct: 342 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 401
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ P+ AL++G CKA I
Sbjct: 402 LDAMLSSGCEPNHIVYDALIDGF------CKAGKI 430
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 109/278 (39%), Gaps = 86/278 (30%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ I+I +FC+ G++++A + EM+ +G P V+TYT LI A+ K + N ++
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 245 NLMVCKGC---------------------------------------------------F 253
+ MV GC
Sbjct: 317 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 376
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG-------- 305
PN+ T+ + L + A++L+ M G EP+ + Y+ +I GFC++G
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 306 ---------------------------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
LD+A KV S ML PN Y MI LC+
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
G+ A + +K P+V T +AL++GL K +
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+++ E+ + D +I E D+A + M+ P+V+TY TL+S F K
Sbjct: 30 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 89
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + N+M+ +GC PN + FN + N++ A KL+ M G P V
Sbjct: 90 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 149
Query: 294 YNLVIKGFCRSGH------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
YN+ I C LD+A+K+Y ML + N+ LC G F+ A+
Sbjct: 150 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 209
Query: 348 MCKDSMKKNWVPSVDTISALL 368
+ K+ M+K +VP T S ++
Sbjct: 210 LIKEMMRKGFVPDTSTYSKVI 230
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 40/330 (12%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + V L A + D+ LL+ L G I+ ++ G KAG I A +
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAM--LSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F M G +V + + + + + L L ++ K ++ ++ +I
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCTPNVVTYTAMIDGL 494
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C +G +KA ++ M++ G P+V+TYT LI K + ++ L+ M KGC PN
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQR-------------------------------- 284
T+ V I HL +A L+G M++
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 614
Query: 285 -FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG--RRLMPNRKIYQTMIHYLCQEGD 341
+G P Y ++I F ++G L++A +++ M+ + + +Y ++I LC
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 674
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
A+ + + ++ +VP + L++GL
Sbjct: 675 VEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 16/326 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK F LF+ V + Y + + A + + L E +S+
Sbjct: 240 EKAFLLFQ-EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK------------- 167
++ Y KA + A D F+ M GC+ + A + L ++ ++
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358
Query: 168 --AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
A F ++ + ++ ++ ++ C+ +D A+ ++ M G +P+ I Y
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
LI F K + + ++ M G P++ T+ I + R A K++ M +
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
P+ VTY +I G CR G + A K+ S M + PN Y +I L + G +L+
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGL 371
+ +K P+ T L+ L
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHL 564
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+AG+ + ++ F + + S NA L L I+ ++ + H D
Sbjct: 228 GRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSP-D 286
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N+V++A + LD+ + ++ EM K G+ PD+ TY L+ K ++P L N
Sbjct: 287 VLTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLN 346
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC P + F I L M + G +PD V Y ++I G+ +G
Sbjct: 347 YMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAG 406
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D A+K + ML R +PN Y +MI LC G+F+ A + KD + P+ S
Sbjct: 407 EFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYS 466
Query: 366 ALLEGLKKNNQPCKANTIM 384
L+ L+ + +AN I+
Sbjct: 467 TLVSRLRNAGKDSEANNII 485
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + GK A++ M GC TV + L+ + +L+A + F E+ +K
Sbjct: 328 LLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKK- 386
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
Q D+ + ++I + G D+A +M G P+V TY ++I +
Sbjct: 387 GCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKA 446
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L M +GC PN ++ + L N + +AN ++ M G
Sbjct: 447 CSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKG 492
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 72/296 (24%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI--- 228
F + E+ + +N+++K F E G L + ++ +M G+ T+ L+
Sbjct: 168 FFLWAEEQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTS 227
Query: 229 ----------------SAF-YKDNRPEIGNGLWNL---------------MVCKGCFPNL 256
S F Y+ R L L M+ +G P++
Sbjct: 228 GRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSPDV 287
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL-------------------- 296
T+NV ++ R+ Q +KL+ M + G+ PD TYNL
Sbjct: 288 LTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLNY 347
Query: 297 ---------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+I G R+G+L+ K + M+ + P+ Y MI G+
Sbjct: 348 MSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGE 407
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPHFS 395
F+ A D + + +P+V T ++++ GL + KA +++ ++ R P+F+
Sbjct: 408 FDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFT 463
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG ++ F +M GC+ V + + + Q F ++ + + ++
Sbjct: 369 RAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRGQLP-NV 427
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I C +G DKA ++ +M+ G P+ Y+TL+S + N +
Sbjct: 428 YTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEANNIIQY 487
Query: 247 MVCKGCFPNLAT 258
M KG + +L +
Sbjct: 488 MTNKGHYLHLLS 499
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 1/243 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A++ + ++ G V + N + L + +K Q E+ K +Q SFN +I
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI-RKTGLQPTAVSFNTLI 274
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+C+ G L++ + + + M++ V PDV TY+ LI K+ + E N L+ M +G
Sbjct: 275 NGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLV 334
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN TF I R A ++ M G++ D V YN +I G C+ G+ A+K
Sbjct: 335 PNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKF 394
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M R L+P++ Y T++ C+EGD LA M K+ +K+ +A++ GL +
Sbjct: 395 VGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCR 454
Query: 374 NNQ 376
+ +
Sbjct: 455 DGK 457
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 38/294 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME-VPEKFHIQFD 185
K G +K A F ++ G + T S N + +S +L+ + F ++ V E+F + D
Sbjct: 244 KEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLE--EGFRLKMVMEEFRVFPD 301
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+++ +I C+ L+ A + EM G+ P+ +T+TTLI+ K+ R ++ ++
Sbjct: 302 VFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQ 361
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG +L +N I L +A K +G M + G+ PD+ TY ++ G C+ G
Sbjct: 362 QMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEG 421
Query: 306 HLDM-----------------------------------AKKVYSAMLGRRLMPNRKIYQ 330
L++ A++ ML L P+ Y
Sbjct: 422 DLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYT 481
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
++ C++GD + + + K+ +P V T + L+ GL K Q A+ ++
Sbjct: 482 MVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLL 535
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D+ +N +I C+ G +A + EM K G+ PD TYTTL+ K+ E+
Sbjct: 368 LKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELAL 427
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ MV +G + F I L + A + + M R G++PD+ TY +V+ GF
Sbjct: 428 EMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGF 487
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G + M K+ M +P Y +++ LC++G A ++ + VP
Sbjct: 488 CKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDD 547
Query: 362 DTISALLEGLKKNNQ 376
T + LL+G K+ +
Sbjct: 548 ITYNILLQGHCKHGK 562
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
IQ D +F +I C G + A + EM + G+KPD TYT ++ F K ++G
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGF 497
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M G P + T+NV + L + + A+ L+ M G+ PD++TYN++++G
Sbjct: 498 KLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGH 557
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
C+ G L + V + M L+ + Y++++H L
Sbjct: 558 CKHGKLGDFQNVKTEM---GLVSDYASYRSLLHEL 589
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 35/206 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++FN+++ C+ G + A L+ E++K G++P +++ TLI+ + K E G
Sbjct: 231 NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG---- 286
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
F +++ +M+ F + PD TY+ +I G C+
Sbjct: 287 --------------FRLKM-----------------VMEEFRVFPDVFTYSALIDGLCKE 315
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L+ A ++ M R L+PN + T+I+ C+ G +LA + + K +
Sbjct: 316 CQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLY 375
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++GL K +A + + +R
Sbjct: 376 NTLIDGLCKGGYFREARKFVGEMTKR 401
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F F+ ++ + E G + A +K +K L+ K + P + +
Sbjct: 163 FVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLE 222
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
++ G PN+ TFNV + L + + A + +++ G++P V++N +I G+C+SG+
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ ++ M R+ P+ Y +I LC+E A + K+ + VP+ T +
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342
Query: 367 LLEGLKKNNQ 376
L+ G KN +
Sbjct: 343 LINGQCKNGR 352
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N+++ FC+ G LD A+ ++ + K G VI Y LI+ ++ R E + +
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + P++ + + I+ L + R +A L+G M G+ PD + YN +IKGFC
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+LD A+ + + PN Y +I +C+ G N A + K+ K +PSV T
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446
Query: 365 SALLEGLKKNNQ 376
++L+ GL K N+
Sbjct: 447 NSLINGLCKANR 458
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 157/344 (45%), Gaps = 36/344 (10%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D L QL + H VI + ++ L ARR++ E + +QK L + + +
Sbjct: 286 DAFTLLQLLTKDGHILGVI----GYGCLINGLFRARRYE--EAHMWYQKMLRENIKPDVM 339
Query: 119 MRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ +M+ G + G + A+ +M G + NA +K + L ++ +E+
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 177 PEKFHIQFDIF----SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ D F +++I+I C+ G+++KA + EM+KLG P V+T+ +LI+
Sbjct: 400 SKH-----DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Query: 233 KDNRPEIGNGLWNLM-----------VCKGC--FPNLATFNVRIQHLVNKRRSWQANKLM 279
K NR E L+ M + +G ++A+ V ++ L +A KL+
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ G+ PD TYN++I GFC+ G+++ A K++ M + MP+ Y T+I L +
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
G A + + +KK VP T ++ C+ N I
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIM------TWSCRENNI 612
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 7/246 (2%)
Query: 150 VKSLNAALKVLTES-----RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
+K + A VL E+ D KA+++F + F + D+F+FN+++
Sbjct: 124 IKISSEAFSVLIEAYSEAGMDEKAVESF--GLMRDFDCKPDLFAFNLILHFLVRKEAFLL 181
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V +M K + PDV+TY LI K + + L++ M +G PN +++ +
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L ++ + A +L M+ G D +TYN+++ GFC+SG+LD A + + +
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I+ L + + A++ + +++N P V + ++ GL + + +A T++
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361
Query: 385 ALVQRR 390
+ R
Sbjct: 362 GEMTER 367
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE-----K 179
Y +AGM + A+++F M + CK + + N L L +AFL+ + K
Sbjct: 138 YSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRK------EAFLLALAVYNQMLK 191
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D+ ++ I+I C+ A ++ EM G+ P+ I Y+ ++S + +
Sbjct: 192 CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFD 251
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ M GC +L T+NV + A L+ L+ + G + Y +I
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G R+ + A Y ML + P+ +Y MI L QEG A + + ++ P
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371
Query: 360 SVDTISALLEG 370
+AL++G
Sbjct: 372 DTICYNALIKG 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 15/275 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHI-- 182
K G+I A F +M GC +V + N+ + L ++ L+ + ME+ K +
Sbjct: 420 KNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFL 479
Query: 183 --------QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
FDI S ++++ CE G++ KAY +++++ GV PD+ TY LI+ F K
Sbjct: 480 RLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKF 539
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
L+ M KG P+ T+ I L R+ A ++ M + G P+ TY
Sbjct: 540 GNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTY 599
Query: 295 NLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
++ CR ++ +A V+ L R + K+ + +E + ++ D
Sbjct: 600 KTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIK 659
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
KN+ + TI L GL + + C+A I ++++
Sbjct: 660 SKNFDLAPYTI--FLIGLVQAKRDCEAFAIFSVLK 692
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF-------------NIVIKA 195
T+ + LKV++ I + L E P+ + F +F + +++I
Sbjct: 44 TLDPMEDGLKVISSRIRSYTITSVLQEQPDT-RLGFRLFIWSLKSWHLRCRTVQDLIIGK 102
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+ + + V+ E++ +K ++ LI A+ + E + LM C P+
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPD 162
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L FN+ + LV K A + M + + PD VTY ++I G C++ A ++
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQ 338
M R ++PN+ IY ++ LCQ
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQ 245
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N +I C+ ++++AY + EM G+ PD ITYTTLI F + L
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLL 208
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ K P + +N+ I L + +A L+ +M + GI+P VTY+ ++ G+C
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLV 268
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + AK+++ AM+ + PN Y MI+ LC+ + A + ++ + KN VP T
Sbjct: 269 GEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 328
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
++L++GL K+ + A +M + R
Sbjct: 329 NSLIDGLCKSGRITSALNLMNEMHHR 354
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 101/191 (52%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ +NI+I A C+ G + +A ++ M K G+KP V+TY+TL+ + + +++
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G PN+ ++N+ I L +R +A L+ M + PD VTYN +I G C+SG
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A + + M R + Y +++ LC+ + + A + ++ P++ T +
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399
Query: 366 ALLEGLKKNNQ 376
AL++GL K +
Sbjct: 400 ALIDGLCKGGR 410
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++S+NI+I C+ +D+A ++ EM + PD +TY +LI K R L
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G ++ T+ + L + +A L M+ GI+P TY +I G C+
Sbjct: 349 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN-WVPSVDT 363
G L A++++ +L + + Y MI LC+EG F+ A + K M+ N +P+ T
Sbjct: 409 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI-KSKMEDNGCIPNAVT 467
Query: 364 ISALLEGLKKNNQPCKANTIM 384
++ L + ++ KA ++
Sbjct: 468 FEIIIRSLFEKDENDKAEKLL 488
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 43/228 (18%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT------------------ 223
I+ + + NI+I FC +G + ++ V+ ++ KLG +PD IT
Sbjct: 41 IRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSL 100
Query: 224 -----------------YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
Y TL++ K L ++ + PN+ +N I L
Sbjct: 101 HFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGL 160
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A L M GI PD +TY +I GFC G L A + M+ + + P
Sbjct: 161 CKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGV 220
Query: 327 KIYQTMIHYLCQEGDF----NLAYIMCKDSMKKNWVPSVDTISALLEG 370
IY +I+ LC+EG+ NL +M K+ +K P V T S L++G
Sbjct: 221 YIYNILINALCKEGNVKEAKNLLAVMTKEGIK----PGVVTYSTLMDG 264
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 3/228 (1%)
Query: 111 QGRREGFIM--RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
+G + G + +M Y G +++A F+ M G V S N + L + + +
Sbjct: 249 EGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 308
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
L E+ K + D ++N +I C+ G + A +M EM G DV+TYT+L+
Sbjct: 309 AMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
A K+ + L+ M +G P + T+ I L R A +L + G
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
D TY ++I G C+ G D A + S M +PN ++ +I L
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 475
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ ++ A C+ LDKA + ++M++ G++P + TYT LI K R + L+
Sbjct: 359 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF 418
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KGC ++ T+ V I L + +A + M+ G P+ VT+ ++I+
Sbjct: 419 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 478
Query: 305 GHLDMAKKVYSAMLGRRLM 323
D A+K+ M+ + L+
Sbjct: 479 DENDKAEKLLHEMIAKGLL 497
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLE---HQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
N Y++ ++ L +R D +LL H+ +P ++ + K+G I A+
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLC---KSGRITSAL 345
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ +MH G V + + L L ++++L A M++ E+ IQ ++++ +I
Sbjct: 346 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER-GIQPTMYTYTALIDG 404
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C+ G L A + + G DV TYT +IS K+ + + + M GC PN
Sbjct: 405 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464
Query: 256 LATFNVRIQHLVNKRRSWQANKLM 279
TF + I+ L K + +A KL+
Sbjct: 465 AVTFEIIIRSLFEKDENDKAEKLL 488
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMV----EMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I FN ++ + +M K YL + +M+ G++ + +T LI+ F +
Sbjct: 10 IIEFNKILGSLAKM----KQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ ++ G P+ T N ++ L K ++ + G + D V+Y ++ G
Sbjct: 66 SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G A K+ + R PN +Y T+I LC++ N AY + + + P
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185
Query: 362 DTISALLEG 370
T + L+ G
Sbjct: 186 ITYTTLIYG 194
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 3/324 (0%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L+ + E KL + + R + + F + L A + +LE S
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAI 169
E +M + + G IK A+ M GC T ++N + + R A+
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
E+ F + D ++N + C+ G + A VM M + G PDV TY +++
Sbjct: 276 GYIQQEIANGF--EPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
K+ + E G+ N MV +GC P++ TFN I L + R +A L + G+ P
Sbjct: 334 CLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D T+N++I C+ G +A +++ M P+ Y T+I LC G A +
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKK 373
K+ S T + +++GL K
Sbjct: 454 KEMESAGCPRSTVTYNTIIDGLCK 477
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 147/365 (40%), Gaps = 39/365 (10%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF-DYIEHLLEHQKSL 109
L L+ + DP+ ++ A +E+ + +L A D ++ L+ +
Sbjct: 48 LTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRRE 107
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM--HLYGCKRTVKSLNAALKVLTESRDLK 167
R G + + Y + + A+D + L+G + N L VL E +K
Sbjct: 108 GHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMK 167
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
++ E+ E+ I+ D+ +FN ++KA C + A L++ EM GV PD T+TTL
Sbjct: 168 LLETVYSEMGER-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTL 226
Query: 228 ISAFYKDN-----------------------------------RPEIGNGLWNLMVCKGC 252
+ F ++ R E G + G
Sbjct: 227 MQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGF 286
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+N + L A K+M +M + G +PD TYN+V+ C++G L+ AK
Sbjct: 287 EPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 346
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ + M+ R +P+ + T+I LC A + + K P V T + L+ L
Sbjct: 347 ILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALC 406
Query: 373 KNNQP 377
K P
Sbjct: 407 KVGDP 411
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++NIV+ C+ G L++A ++ +M + G PD+ T+ TLI A NR E L
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P++ TFN+ I L A +L M+ G PDEVTYN +I C
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443
Query: 305 GH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
G LD+ K++ SA R + Y T+I LC++ A + + +
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTV----TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 361 VDTISALLEGLKKNNQPCKANTIMA 385
T + L++GL K+ + AN +++
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLIS 524
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + HA+ M G V + N + L ++ L+ + L ++ E+ + DI +
Sbjct: 304 GHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLP-DITT 362
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I A C L++A + ++ G+ PDV T+ LI+A K P++ L+ M
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P+ T+N I +L + + +A L+ M+ G VTYN +I G C+ ++
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIE 482
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A++V+ M + + N + T+I LC++ + A + + + P+ T +++L
Sbjct: 483 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542
Query: 369 EGLKKNNQPCKANTIM 384
K KA I+
Sbjct: 543 THYCKQGDIKKAADIL 558
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D + L G V + N + L + D + + L E + D ++N
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQ-LALRLFEEMKSSGCTPDEVTYN 434
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C +G L KA ++ EM+ G +TY T+I K R E +++ M +
Sbjct: 435 TLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQ 494
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N TFN I L +R AN+L+ M G++P+ +TYN ++ +C+ G + A
Sbjct: 495 GISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKA 554
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ M + Y T+I+ LC+ G +A
Sbjct: 555 ADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVA 589
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 4/278 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F +M GC + N + L L L E+ E
Sbjct: 407 KVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM-ESAGCPRST 465
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ +++A V +M G+ + IT+ TLI KD R + N L +
Sbjct: 466 VTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQ 525
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G PN T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 526 MISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGR 585
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+A K+ M + + K Y +I L + + A + ++ + P T
Sbjct: 586 TQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKI 645
Query: 367 LLEGLKKNNQPCKA--NTIMALVQRR-VPHFSSNQLSA 401
+ GL + + + ++ +V + +P FSS ++ A
Sbjct: 646 VFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLA 683
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K ++ Y LY N ++ + D++ Q L + K+ ++ + S
Sbjct: 120 GFYKEILECGYPASLY-------FFNILMQRFCKEGDIRVAQLVLNAIT-KWGLRPSVVS 171
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN +I + +G LD+ + + M GV+PDV TY+ LI+ K+++ + N L++ M+
Sbjct: 172 FNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 231
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN TF I R A ++ M + PD +TYN +I G C+ G L
Sbjct: 232 DKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELK 291
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M L P++ Y T+I C+EGD A+ K +++N +AL+
Sbjct: 292 QAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALI 351
Query: 369 EGLKKNNQPCKANTIM 384
GL + + A ++
Sbjct: 352 SGLCQEGRSVDAEKML 367
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 133/255 (52%), Gaps = 1/255 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + + L+ L + + K + F E+ E
Sbjct: 70 LITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECG 129
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI+++ FC+ G + A LV+ + K G++P V+++ TLI+ + + + G
Sbjct: 130 Y-PASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEG 188
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G
Sbjct: 189 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDG 248
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L P+ Y T+I+ LC++G+ A+ + + + P
Sbjct: 249 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPD 308
Query: 361 VDTISALLEGLKKNN 375
T + L++G K
Sbjct: 309 KITYTTLIDGCCKEG 323
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 38/245 (15%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A + +G + +V S N + DL + F L
Sbjct: 136 FFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLD--EGFRLKS 193
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 194 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNG 253
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 254 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYT 313
Query: 296 LV-----------------------------------IKGFCRSGHLDMAKKVYSAMLGR 320
+ I G C+ G A+K+ ML
Sbjct: 314 TLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 373
Query: 321 RLMPN 325
L PN
Sbjct: 374 GLKPN 378
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 145/364 (39%), Gaps = 38/364 (10%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+ + DP+ ++ A +E+ + +L D ++ L+ +
Sbjct: 45 LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREG 104
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDM--HLYGCKRTVKSLNAALKVLTESRDLKA 168
+ G + + Y + A+D + L+G + N L VL E +K
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+++ E+ + I+ D+ +FN ++KA C + A +++ EM GV PD T+TTL+
Sbjct: 165 LESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223
Query: 229 SAFYKDN-----------------------------------RPEIGNGLWNLMVCKGCF 253
F ++ R E G + G
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + L A K+M +M + G +PD TYN+V+ C++G L+ AK +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ R +P+ + T+I LC A + + K P V T + L+ L K
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403
Query: 374 NNQP 377
P
Sbjct: 404 VGDP 407
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+LE S E +M + + G I+ A+ M GC T ++N +
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 162 E-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ R A+ E+ + F + D ++N + C+ + A VM M + G PD
Sbjct: 263 KLGRVEDALGYIQQEIADGF--EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY +++ K+ + E G+ N MV +GC P++ TFN I L R +A L
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G+ PD T+N++I C+ G +A +++ M P+ Y T+I LC G
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + KD S T + +++GL K
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ HA+ M G V + N + L ++ L+ + L ++ ++ + DI +FN
Sbjct: 302 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFN 360
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A C L++A + ++ GV PDV T+ LI+A K P + L+ M
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P+ T+N I +L + + +A L+ M+ G +TYN +I G C+ ++ A
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 480
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++V+ M + + N + T+I LC++ + A+ + + + P+ T +++L
Sbjct: 481 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH 540
Query: 371 LKKNNQPCKANTIM 384
K KA I+
Sbjct: 541 YCKQGDIKKAADIL 554
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 6/279 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G A+ F +M GC + N + L L KA+ L++ E
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD--LLKDMESTGCPRS 460
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I C+ +++A V +M G+ + IT+ TLI KD + + L N
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G PN T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+A KV M + + P K Y ++ L + + A + ++ + P T
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Query: 366 ALLEGLKKNNQPCKA--NTIMALVQRR-VPHFSSNQLSA 401
+ GL + P K + ++ +V + +P FSS ++ A
Sbjct: 641 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D + + G V + N + L + D + L E + D ++N
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGD-PHLALRLFEEMKNSGCTPDEVTYN 430
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C +G L KA ++ +M+ G ITY T+I K R E +++ M +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G N TFN I L ++ A +L+ M G++P+ +TYN ++ +C+ G + A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M + Y T+I+ LC+ G +A + + K P+ + +L+
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 371 L-KKNN 375
L ++NN
Sbjct: 611 LFRRNN 616
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 3/254 (1%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N + L ++ ++ E+ K ++ ++ S+N +I FC+ L A V
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDLVAAKDVF 242
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M + P+V+TYTTLI K + + + + MV KG PN+AT++ I
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
RR +A+KL+ M GI P VTYN+++ CR+ L+ A K++ M RR P Y
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ- 388
T++ LC + A+ + + + K P T L GL + + +A +M ++
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKL 422
Query: 389 -RRVPHFSSNQLSA 401
+R P S+Q A
Sbjct: 423 TKRNPFGRSSQGKA 436
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 132/309 (42%), Gaps = 20/309 (6%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG---RREGFIMRIMMLYGKAGM 130
R VI F A A R + ++ + +Q + G R G+ + I L K G
Sbjct: 4 RRVIPGAATFNTVADGFAKAGRLEQVKEV--YQGMVEAGYTLRASGYGILISCLC-KVGN 60
Query: 131 IKHAMDTFYDMHLYGCKR------TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
A + M L KR T+ + L + E+R+L I+ P
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL--IEKMARYAPP------ 112
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +++ C+ +D A + EM G+KPD Y ++S ++ + E L+
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 172
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + PN+ T+N I L R A +L M G P EV+YN +I GFC+
Sbjct: 173 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 232
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L AK V+ M+ +PN Y T+I L + G A + +KK P+V T
Sbjct: 233 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 292
Query: 365 SALLEGLKK 373
S L++G K
Sbjct: 293 SCLIDGFCK 301
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K I A+ T +M G K N L L + ++ + L E K I ++
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR-LLFEKMVKQRINPNV 184
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ ++ AY + EM G P ++Y TLI F K +++
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C PN+ T+ I L + A +++ M + G+ P+ TY+ +I GFC+
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A K+ M+ + + P Y +++ LC+ A+ + + ++ P+V T +
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364
Query: 367 LLEGLKKNNQ 376
LL L + Q
Sbjct: 365 LLRALCHHKQ 374
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P T+N V GF ++G L+ K+VY M+ Y +I LC+ G+F+ AY +
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
K + S ++ L K N+ +A ++ + R P
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP 111
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+ ++ A+ F +M G N+ L L S + F E+ E+ ++FD+
Sbjct: 105 KSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER--VKFDV 162
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA-----------FYKDN 235
+SF I+IK CE G LDK++ ++ +Q +G+ P+V+ YTTLI + D
Sbjct: 163 YSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDK 222
Query: 236 RPEIG------------NG------------LWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
E+G NG L+ M G FPNL T+N + + +
Sbjct: 223 MGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGK 282
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A L M+ G+E + VTYN +I G CR + A+K+ M + PN Y T
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKK 373
+I C G+ + A + D +K N + PS+ T + L+EG K
Sbjct: 343 LIGGFCDVGNLDKASSLL-DQLKSNGLSPSLVTYNILIEGYSK 384
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 3/265 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEK 179
+M Y G I A D F +M G + V + N + + E R +A + L++ +K
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEK--LVDQMKK 330
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ ++ ++N +I FC++G LDKA ++ +++ G+ P ++TY LI + K +
Sbjct: 331 AAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKG 390
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M +G P+ T V I V + +A ++ M++FG+ PD Y ++I
Sbjct: 391 VADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIH 450
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C G++ + K++ +M + P+ IY TMIH C+E + A + ++ K VP
Sbjct: 451 GLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVP 510
Query: 360 SVDTISALLEGLKKNNQPCKANTIM 384
+V + S+++ L K+ + +A ++
Sbjct: 511 NVASYSSIIGVLCKDGKWEEAEVLL 535
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++N ++ +C G + +A+ + EM++ GV+ +V+TY TLI ++ R L
Sbjct: 266 NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M PNL T+N I + +A+ L+ ++ G+ P VTYN++I+G+ ++
Sbjct: 326 DQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ + M GR + P++ +I + + A+ + K VP V
Sbjct: 386 GNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVY 445
Query: 365 SALLEGL 371
L+ GL
Sbjct: 446 GVLIHGL 452
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
Y KAG K D +M G + + + +++ KA Q + EKF +
Sbjct: 382 YSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIY--SSMEKFGLV 439
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D++ + ++I C G + ++ + M ++ V+P + Y T+I + K++ L
Sbjct: 440 PDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
M KG PN+A+++ I L + +A L+ M ++P N++ K
Sbjct: 500 LREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISK 555
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 105 HQKSLPQGRREGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
H+ G R ++ +++ Y K+G ++ A + M G +++ NA LK L +
Sbjct: 163 HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRA 222
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
D A+ + E I D+++++ +I+A+C++ D A V+VEM++ G + +T
Sbjct: 223 -DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVT 281
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI+ + E G M G P+ T+ I L RRS +A L+ M
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 341
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
++P+ V Y +I GF R G+ D A K+ M+ + PN+ Y ++ LC+ G +
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 401
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEG 370
A ++ K ++ + P T + ++EG
Sbjct: 402 RASLLLKQMVRDSHRPDTITYNLIIEG 428
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 1/310 (0%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
Y + + R FD + +L + G ++ ++G ++ A D
Sbjct: 245 YTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 304
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M YG + A + L +SR +A L E+ ++ ++ + +I F G
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREG 363
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
D+A+ ++ EM GV+P+ ITY L+ K + + + L MV P+ T+N
Sbjct: 364 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ I+ A +L+ M+ GI P+ TY+++I G C+SG + A + M +
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
L PN +Y +I C+EG+ +LA + K N +P + ++L+ GL K + ++
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543
Query: 381 NTIMALVQRR 390
A +Q R
Sbjct: 544 TKYFAQMQER 553
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 35/253 (13%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+ E I ++++++I+I C+ G +KA ++ EM G+KP+ Y LIS +
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++ + +++ M P+L +N I L R ++ K MQ G+ P+E
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN--------------------------- 325
TY+ +I G+ ++G L+ A+++ ML L PN
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 326 --------RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+IY +IH L G+ A+ + K VP V S+L+ GL K
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 378 CKANTIMALVQRR 390
KA I+ + ++
Sbjct: 681 EKAFGILDEMSKK 693
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 99/247 (40%), Gaps = 39/247 (15%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ I+I G ++ A+ V+ ++K G PDV Y++LIS K E G+ + M
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN+ +N I L A + + G+ P+ VTY +I G C+ G +
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----------------------NLAY 346
A +Y+ ML + P+ +Y + GD NL
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVD 811
Query: 347 IMCKDS------------MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP-- 392
CK M + VP+ TI ++ GL + + + +TI +Q++
Sbjct: 812 GFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSES 871
Query: 393 ---HFSS 396
HFSS
Sbjct: 872 AARHFSS 878
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 4/186 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N++I+ A+ ++ EM+ G+ P+V TY+ +I + PE + L
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG PN + I + A ++ M + + PD YN +I G +
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----NLAYIMCKDSMKKNWVPS 360
G ++ + K ++ M R L+PN Y +IH + GD L M +K N V
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597
Query: 361 VDTISA 366
+D + +
Sbjct: 598 IDLLES 603
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 92/184 (50%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ +I + + G L+ A ++ M G+KP+ + Y L+ +++K + E + +
Sbjct: 560 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 619
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G + + + I +L + A +++ +++ G PD Y+ +I G C++
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 679
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + M + + PN Y +I LC+ GD + A + + K VP+ T ++
Sbjct: 680 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 739
Query: 367 LLEG 370
L++G
Sbjct: 740 LIDG 743
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K ++ D++ +N +I ++G ++++ +MQ+ G+ P+ TY+ LI + K+ E
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M+ G PN + ++ + + M G+ D Y ++I
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
SG+++ A +V S + +P+ +Y ++I LC+ D A+ + + KK
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 696
Query: 359 PSVDTISALLEGLKKNNQPCKA----NTIMA 385
P++ +AL++GL K+ A N+I+A
Sbjct: 697 PNIVCYNALIDGLCKSGDISYARNVFNSILA 727
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%)
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
L+ + K R + + +M +G P++ N ++ L+ K+ M
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI PD TY+ +I+ +C+ D AKKV M R N Y +I LC+ G A
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ KD VP T AL+ GL K+ + +A ++
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 337
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL-- 246
++++ + + G + A V++ M+ G+ P + L+ + + + LW +
Sbjct: 177 LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMAL---LWKVRE 233
Query: 247 -MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G P++ T++ I+ R A K++ M+ G + VTYN++I G CRSG
Sbjct: 234 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 293
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A M L+P+ Y +I+ LC+ N A + + P+V +
Sbjct: 294 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 353
Query: 366 ALLEGLKKNNQPCKA 380
L++G + +A
Sbjct: 354 NLIDGFMREGNADEA 368
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 19/258 (7%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I +A + +M G + + + DL+ + E+ + H I
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS--I 803
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
SFN ++ FC+ G + + ++ + G+ P+ +T +IS +
Sbjct: 804 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE------------- 850
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
G + T V +Q ++ + + L M G P +V ++ I+ C+ G+
Sbjct: 851 ---AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDM-IRDHCKEGN 906
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A + ++ + Y ++ LC++G + A + K+ K+ PS +
Sbjct: 907 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLI 966
Query: 367 LLEGLKKNNQPCKANTIM 384
LL L + + NT++
Sbjct: 967 LLTNLHTSGYIQEHNTVL 984
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 130/296 (43%), Gaps = 37/296 (12%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M+ Y +AGM+++A+ M G + + N A+ VL + L+ FL E +
Sbjct: 238 VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFL-ERMKVA 296
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEI 239
I+ DI S+N +IK +C++ +D A ++ EM G PD ++Y T+++ KD + E+
Sbjct: 297 GIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEV 356
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHL--------------------------------- 266
+ N++ P+ T+N I L
Sbjct: 357 KRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVD 416
Query: 267 --VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ +A L+ M G PD VTY +I GFCR G +D AKK+ M P
Sbjct: 417 SFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKP 476
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
N Y +++ LC G A M S + W P+ T SA++ GL++ + +A
Sbjct: 477 NTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 38/249 (15%)
Query: 172 FLMEVPEK-FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
FL E EK FHI D ++ V+ +FC+ +DKA ++++M G PDV+TYT +I
Sbjct: 395 FLREAEEKGFHI--DKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDG 452
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
F + + + + M GC PN T+ V + L + +S +A +++ + + P+
Sbjct: 453 FCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPN 512
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN--------------------RKI-- 328
+TY+ V+ G R G L A + M+ + +PN +K
Sbjct: 513 AITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLE 572
Query: 329 -------------YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ ++I+ CQ GD + A M +D N P T + L + L K +
Sbjct: 573 ECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKS 632
Query: 376 QPCKANTIM 384
+ +A+ ++
Sbjct: 633 RLDEASELI 641
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 119/250 (47%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y I A++ +M GC S + L + R ++ ++ + + + ++
Sbjct: 312 YCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIP 371
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I A + G D A + + E ++ G D + Y+ ++ +F K+ + L
Sbjct: 372 DQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLV 431
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC P++ T+ I + +A K++ M + G +P+ VTY +++ G C +
Sbjct: 432 IDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHN 491
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A+++ + PN Y ++H L +EG + A + ++ ++K ++P+ I
Sbjct: 492 GKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDI 551
Query: 365 SALLEGLKKN 374
+ L++ L +N
Sbjct: 552 NLLIQSLCRN 561
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 13/263 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A D +M G +N ++ L ++++ + +L E K ++
Sbjct: 525 REGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHK-GCAVNV 583
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F VI FC++G LD A ++ +M PD ITYTTL A K +R + + L
Sbjct: 584 VNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVK 643
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR-FGIEPDEVTYNLVIKGFCRSG 305
M+ KG P T+ I R + +M L+++ +P + YN VI+ C G
Sbjct: 644 MLGKGIDPTPVTYRAVIHRFCQWGR---VDDMMKLLEKMIARQPFKTVYNQVIEKLCYFG 700
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ----EGDFNLAYIMCKDSMKKNWVPSV 361
+ + A+K +LG+ L K+ H L + +G+ AY + ++N +P +
Sbjct: 701 NREEAEK----LLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDL 756
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
+ + L + P +A+ +M
Sbjct: 757 KLCEKVTKKLVLDGMPAEADDLM 779
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F+ V+ ++ G+L A ++ MQK GV+PD+ T I K N+ E M
Sbjct: 234 AFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERM 293
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P++ ++N I+ + R A +L+ M G PD+V+Y V+ C+ +
Sbjct: 294 KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKV 353
Query: 308 DMAKKVYSAML-GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ K++ M+ L+P++ Y T+I+ L + G + A + +++ +K + SA
Sbjct: 354 EEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413
Query: 367 LLEGLKKNNQPCKANTIM 384
+++ KN KA +++
Sbjct: 414 VVDSFCKNKNIDKAKSLV 431
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 35/219 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ +I FC +G +D+A ++ +M K G KP+ +TYT L++ + + +
Sbjct: 442 DVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMI 501
Query: 245 NL-----------------------------------MVCKGCFPNLATFNVRIQHLVNK 269
N+ M+ KG PN N+ IQ L
Sbjct: 502 NVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRN 561
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A K + G + V + VI GFC+ G LD A + M P+ Y
Sbjct: 562 QNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITY 621
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
T+ L ++ + A + + K P+ T A++
Sbjct: 622 TTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDXVAYTALISGLCQEGRSVDAEKML 369
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 15/304 (4%)
Query: 99 IEHLLE----------HQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
IEHL++ +++SL G F +M + K G I+ A F + +G
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ +V S N + + DL + F L + +Q D+++++++I C+ +D A
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLD--EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ EM G+ P+ +T+TTLI K+ R ++ ++ M+ + P+L T+N I
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYG 285
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K QA L M G++PD++TY +I G C+ G L+ A + M+ + +
Sbjct: 286 LCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
Y +I LCQEG A M ++ + P + T + ++ K + ++
Sbjct: 346 XVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405
Query: 386 LVQR 389
+QR
Sbjct: 406 EMQR 409
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 88/156 (56%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I+ C+ G++D+A+ ++ ++ G +PDVI+Y L+ A + E G L
Sbjct: 258 DMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 317
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C PN+ T+++ I L + +A L+ LM+ G+ PD +Y+ +I FCR
Sbjct: 318 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 377
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD+A + M+ +P+ Y T++ LC+ G
Sbjct: 378 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 413
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD- 185
K GM+ A + ++ L GC+ V S N L+ L + + + ++ F + D
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM---FSEKCDP 327
Query: 186 -IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++I+I C G +++A ++ M++ G+ PD +Y LI+AF ++ R ++
Sbjct: 328 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ GC P++ +N + L ++ QA ++ G + G P+ +YN + S
Sbjct: 388 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 447
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A + M+ + P+ Y +MI LC+EG + A+ + D + PSV T
Sbjct: 448 GDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTY 507
Query: 365 SALLEGLKKNNQPCKANTI 383
+ +L G CKA+ I
Sbjct: 508 NIVLLGF------CKAHRI 520
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 102/198 (51%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q + ++ I+I+A G +D+A ++ EM G+KPD+ TY T+I K+ +
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 280
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ + KGC P++ ++N+ ++ L+N+ + + KLM M +P+ VTY+++I C
Sbjct: 281 MIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 340
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G ++ A + M + L P+ Y +I C+EG ++A + + +P +
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 400
Query: 363 TISALLEGLKKNNQPCKA 380
+ +L L KN + +A
Sbjct: 401 NYNTVLATLCKNGKADQA 418
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ EKF Q D+F++N +I FC+M +D A V+ M+ PD +TY +I +
Sbjct: 142 VMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 200
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ + + ++ C P + T+ + I+ + + +A KL+ M G++PD
Sbjct: 201 SRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMF 260
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN +I+G C+ G +D A ++ + + P+ Y ++ L +G + +
Sbjct: 261 TYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T S L+ L ++ + +A ++ L++ +
Sbjct: 321 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I + C G LD A V+ ++ +P VITYT LI A + + L
Sbjct: 188 DTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLL 247
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P++ T+N I+ + + +A +++ ++ G EPD ++YN++++
Sbjct: 248 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQ 307
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +K+ + M + PN Y +I LC++G A + K +K P +
Sbjct: 308 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367
Query: 365 SALL 368
L+
Sbjct: 368 DPLI 371
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ Y+++ ++ R D LE S LP ++ + GKA A+
Sbjct: 363 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA---DQAL 419
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ F + GC S N L S D ++A+ L V I D ++N +I
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG--IDPDEITYNSMIS 477
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C G++DKA+ ++V+M+ P V+TY ++ F K +R E + + MV GC P
Sbjct: 478 CLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRP 537
Query: 255 NLATFNVRIQHL 266
N T+ V I+ +
Sbjct: 538 NETTYTVLIEGI 549
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 130/250 (52%), Gaps = 1/250 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M+ Y ++G ++ A+ F + + L+ L + R + + F E+ E
Sbjct: 72 LMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECG 131
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A +V + K ++P V+++ TL++ + + + G
Sbjct: 132 YPP-SLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + + +AN+++ M G+ P+ VT+ +I G
Sbjct: 191 FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDG 250
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + +P+ Y T+I+ LC+ GD A + ++ + K P
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310
Query: 361 VDTISALLEG 370
T + L++G
Sbjct: 311 KITYTTLIDG 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 108/211 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D+++++++I C+ +D+A ++ EM G+ P+ +T+TTLI K+ + ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAM 261
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M+ +G P+L T+N I L + QA L+ M G++PD++TY +I G
Sbjct: 262 EIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGS 321
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G L++ ++ M+ + + Y +I LC+EG A M ++ + P
Sbjct: 322 CKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDN 381
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVP 392
T + ++ K A+ ++ +QR P
Sbjct: 382 GTYTMIMNEFCKTGDVKTASKLLREMQRNGP 412
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 26/259 (10%)
Query: 132 KHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-DIFSF 189
+H + ++ M H + + + ++V+ + + A + E Q D++ F
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVF 69
Query: 190 NIVIKAFCEMGILDKAY--LVMVEMQKLGVKPDV----------ITYTTLISAFYKDNRP 237
+ ++ A+ E G + A + + K+ V D + Y L+ FYK+
Sbjct: 70 SGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKE--- 126
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
++ C G P+L FN+ + + A + + ++ + P V++N +
Sbjct: 127 --------ILEC-GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTL 177
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+ R G LD ++ SAM + P+ Y +I+ LC+E + A M + +
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGL 237
Query: 358 VPSVDTISALLEGLKKNNQ 376
VP+ T + L++G KN +
Sbjct: 238 VPNGVTFTTLIDGHCKNGK 256
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 155/359 (43%), Gaps = 66/359 (18%)
Query: 48 PPALVKLKAERDP-EKLFQLFKAN-------AHNRIVIENKYAFEDT-------VSRLAG 92
PPA KL + P +L +L K+ AH +++ + AF + RLA
Sbjct: 2 PPA--KLDPDPPPIHRLLELIKSEPDATAALAHLELLVSTRPAFPPPQPLLFHLLRRLAT 59
Query: 93 ARRFDYIEHLLEHQKSLPQGRR-----EGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGC 146
+ HL LP+ R E + ++ + +A M A+D F + + GC
Sbjct: 60 SSP----SHLPCLLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGC 115
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQFDIFSFNIVIKAFCEMGILD 203
++S NA L +R AF + I ++ ++NIV+++ C G LD
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG---------NGLWNLMVC----- 249
+A + +++ V PD ITY+TL+ K +R + +G+ +VC
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALL 235
Query: 250 KGCF----------------------PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
GCF PNLAT+NV + L R + ++ M +
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNL 295
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+PD +TY ++I G CRSG +D A +VYS ++ L+ + +Y +++ CQ G A+
Sbjct: 296 QPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+FS++ +I C +G L A V +M K G KP+ Y LIS F + R
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ M GC P + T+N I L + +A+ + M G PD TY +I+G
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSV 361
+D A ++ +L + L + ++ +IH LC G + A + D KKN P++
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + L++GL + KA T+
Sbjct: 616 VTYNTLMDGLYETGYIDKAATL 637
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I C+ +A V EM + G PD+ TY +LI + D + + +W
Sbjct: 509 VITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM-QRFGIEPDEVTYNLVIKGFCRS 304
++ KG ++ N+ I L + + +A + M ++ P+ VTYN ++ G +
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++D A +++++ L P+ Y T I LC + + + + + +P+V T
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688
Query: 365 SALLEGLKK 373
+ L+ + K
Sbjct: 689 NILVRAVIK 697
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ NI+I C G +D+A V +M +K P+++TY TL+ Y+ +
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
LW + G P++ ++N RI+ L + R + +L+ + GI P +T+N++++
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694
Query: 301 FCRSG 305
+ G
Sbjct: 695 VIKYG 699
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR--FG--IEPDEVTYNLVIKGFCRSGH 306
GC P + + N + V RR A+ + FG I P+ TYN+V++ C G
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A ++ ++ R++ P+ Y T++ L ++ + A + + + P V +A
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 367 LLEGLKKNNQ 376
LL G K +
Sbjct: 234 LLGGCFKAGE 243
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 47/230 (20%)
Query: 191 IVIKAFCEMGILDKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+V+ AF + D A + LG P + ++ L+ AF + R + + +
Sbjct: 88 VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASL-S 146
Query: 250 KGCF-----PNLATFNVRIQH-----------------------------------LVNK 269
G F PNL T+N+ ++ L +
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---GRRLMPNR 326
R A L+ M R G++PD V YN ++ G ++G + +V+ ++ G R PN
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR--PNL 264
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y M+ LC+ G F + + + N P V T L+ GL ++
Sbjct: 265 ATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ + + G K V N + L + + ++ EK + ++ ++N
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ E G +DKA + + + G++PD+I+Y T I +R G L + ++ +
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679
Query: 251 GCFPNLATFNVRIQHLV 267
G P + T+N+ ++ ++
Sbjct: 680 GIIPTVITWNILVRAVI 696
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K GMI AMD F M +G +
Sbjct: 40 YAKCGMIDKAMDIFNKMRQHG------------------------------------LSP 63
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ +I A C++G +D A + +M GV P+++ +++L+ ++ E L+
Sbjct: 64 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELF 123
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G PN+ FN + +L + R + +L+ ++ G+ PD ++YN +I G C +
Sbjct: 124 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 183
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K+ M+ L PN Y T++H C+ G + AY + + + P V T
Sbjct: 184 GTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTY 243
Query: 365 SALLEGL 371
+ +L GL
Sbjct: 244 NTILHGL 250
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L++ E ++ D+ S+N +I C G +D+A ++ M +G+KP+ +Y TL+ +
Sbjct: 157 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYC 216
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K R + L+ M+ G P + T+N + L +R +A +L M G +
Sbjct: 217 KAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIY 276
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN ++ G C+S +D A K++ ++ + L N + MI L + G A +
Sbjct: 277 TYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 336
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
VP V T + E L + + +++ + +++ +S L+A
Sbjct: 337 PANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 386
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR---------- 236
FS+N ++ +C+ G +D AY + +M G+ P V+TY T++ ++ R
Sbjct: 206 FSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 265
Query: 237 -------------PEIGNGL------------WNLMVCKGCFPNLATFNVRIQHLVNKRR 271
I NGL + + KG N+ TF + I L+ R
Sbjct: 266 MINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 325
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A L + G+ PD VTY +V + G L+ ++SAM PN ++
Sbjct: 326 KEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 385
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ L GD + A ++N+ T S L+
Sbjct: 386 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 422
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 35/152 (23%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FNI A+ + G++DKA + +M++ G+ PD ++Y LI A K R + +N M+
Sbjct: 33 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ V ++ ++ G C +
Sbjct: 93 NEGVTPNI-----------------------------------VVFSSLVYGLCSIDKWE 117
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++++ ML + PN + T++ LC+EG
Sbjct: 118 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 149
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
NK + + L+ LM GI P+ +N+ + + G +D A +++ M L P+
Sbjct: 7 NKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAV 66
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y +I LC+ G + A + + + P++ S+L+ GL
Sbjct: 67 SYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGL 110
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 5/237 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N +++ + A R D L +K L G G + +L+G + A +
Sbjct: 204 NSFSYNTLLHGYCKAGRIDSAYSLF--RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 261
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ +M G K + + N L L +S + + K +Q +I +F I+I A
Sbjct: 262 LYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSK-GLQLNIITFTIMIGAL 320
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G + A + + G+ PDV+TY + ++ E + L++ M G PN
Sbjct: 321 LKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNS 380
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
N ++ L+++ +A + + + T +++I F + AK +
Sbjct: 381 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 437
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+++ D+ +NI+I + +G ++ A V M K G+ P+V TY LI+ F +
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+GL + M KG ++ T+NV I L K +A KL+ M G+EP+ +TYN +I+G
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC G++ A ++ + M R N Y I Y CQ G + A + + + K VP+
Sbjct: 484 FCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPN 543
Query: 361 VDTISALLEGL 371
T + EG+
Sbjct: 544 GITYETIKEGM 554
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAY---LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++N +I +C+ G Y +++ EM + G+ P +T+ LI+ + K++
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++ M +G ++ T+N I L ++ + + KLM M+ G+ P+E+T+ V+KGFC
Sbjct: 286 VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFC 345
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A M R + P+ IY +I + G A + + KK P+V
Sbjct: 346 KKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVT 405
Query: 363 TISALLEGLKKNNQ 376
T + L+ G ++
Sbjct: 406 TYNCLITGFSRSGD 419
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE---SRDLKAIQAFLMEVPEKFHIQ 183
+ G ++ A D D+ +G +V + N+ + + + ++ + L E+ E I
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA-GIS 261
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+F ++I +C+ A V EM++ G+ V+TY +LIS + + E G L
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G PN TF ++ K AN + M +EPD V YN++I + R
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ A V AM + + PN Y +I + GD+ A + + +K V T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 364 ISALLEGL 371
+ L+ L
Sbjct: 442 YNVLIGAL 449
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
+Y + G ++ AM M G V + N + + S D ++ L E+ EK I+
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-GIE 436
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ ++N++I A C G + KA ++ EM ++G++P+ +TY T+I F + +
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M N+ T+NV I++ + +AN L+ M + P+ +TY + +G
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556
Query: 304 SGH 306
G+
Sbjct: 557 KGY 559
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ ++ N + LV +R A K R + PD T+N VI G CR G L A V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY---IMCKDSMKKNWVPSVDTISALLEG 370
+ L P+ Y ++I C++G Y ++ K+ ++ P+ T L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 371 LKKNNQPCKA 380
KN+ A
Sbjct: 274 YCKNSNTAAA 283
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
+P + L++ R ++ + + + P++ TFN I L + +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSG------HLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +G+ P TYN +I G+C+ G H+DM K M+ + P +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK---EMVEAGISPTAVTFGV 269
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I+ C+ + A + ++ ++ SV T ++L+ GL
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 44/322 (13%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY-D 140
A E V RLA A D ++ L+ + EG ++ + + +AG A+ TFY
Sbjct: 57 AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116
Query: 141 MHLYGCKRTVKSLNAALK------------VLTESRDLKAIQAFLMEVPEKFHIQFDIF- 187
+H GC R ++ AAL+ L ++ + A + L E+ K D+
Sbjct: 117 VHDLGCARPHRA--AALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTY 174
Query: 188 ----------------------------SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
S+N ++ A C + + + V+ +M G++P
Sbjct: 175 ATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP 234
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+VITYTT++ AF K + + MV GC PN+ TF ++ L + R A +
Sbjct: 235 NVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMW 294
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M G P V+YN++I+G C G L A + ++M PN + Y T+I +
Sbjct: 295 RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 354
Query: 340 GDFNLAYIMCKDSMKKNWVPSV 361
GD A + D + P+V
Sbjct: 355 GDLGGAISIWNDMSRSGCKPNV 376
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ ++ ++ AFC+ G L A ++ M G P+V+T+T L+ + D R
Sbjct: 232 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 291
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+W MV +G P+ ++N+ I+ L + A+ ++ M++ G P+ TY+ +I GF
Sbjct: 292 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 351
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++G L A +++ M PN +Y M+ C++ FN A + + +N P+
Sbjct: 352 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 411
Query: 362 DTISALLEGL 371
T + L+ L
Sbjct: 412 VTFNTLIRSL 421
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+D + M G + S N ++ L DLK + L + E+ ++ +
Sbjct: 285 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM-EQHGCFPNVRT 343
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I F + G L A + +M + G KP+V+ YT ++ F K L + M+
Sbjct: 344 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 403
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ C PN TFN I+ L + RR +A + M+R G P+ TYN +I G R G+
Sbjct: 404 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 463
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + M + + Y T++ LCQ A + + + P+ T SA++
Sbjct: 464 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 523
Query: 369 EGLKKNNQ 376
K +
Sbjct: 524 HAYCKEGE 531
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTV----KSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+ KAG + A+ + DM GCK V ++ K L ++ I L+E
Sbjct: 351 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE----- 405
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + +FN +I++ C+ + +A V EM++ G P+ TY LI +++
Sbjct: 406 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 465
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M G +L T+N + L R S +A +G M GI+P+ T++ +I
Sbjct: 466 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 525
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C+ G + MA + AM N +Y ++ LC + A + + P+
Sbjct: 526 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 585
Query: 361 VDTISALLEGLKKN 374
T + L+ G+ +N
Sbjct: 586 TVTWNVLVRGVFRN 599
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
R L R A K++ M R G PD+VTY ++ C+ LD A +V +AM
Sbjct: 142 RTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM---- 197
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
P Y ++ LC+E + + D + + P+V T + +++ K + A
Sbjct: 198 -PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 256
Query: 382 TIMA 385
I+A
Sbjct: 257 AILA 260
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 145/371 (39%), Gaps = 84/371 (22%)
Query: 79 NKYAFE-DTVS------RLAGARRFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKA 128
+ Y F+ DTVS L A+R++ +E L + +P ++R + +
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR---FFCRG 298
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
GM++ A+ M +GC + N L
Sbjct: 299 GMVERAIQVLEQMSGHGC-----AANTTL------------------------------- 322
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
NIVI C+ G +D A+ + M G PD I+YTT++ + R E L MV
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG--- 305
K C PN TFN I L K QA L+ M G E + VTYN ++ GFC G
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 306 -----------------------------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
LD A ++ + ML + PN + ++ +
Sbjct: 443 SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
CQ+G + A + + M+ P++ T + LL+G+ K+ C + + L+ V + S
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD---CNSEEALELLHGLVSNGVS 559
Query: 397 NQLSAFKSILS 407
+ + SI+
Sbjct: 560 PDIVTYSSIIG 570
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A++ FY M CK + L L + L A L E+ +K ++ +
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK-DCAPNVVT 494
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN+++ FC+ G++D+A ++ +M + G P++ITY TL+ KD E L + +V
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T++ I L + R +A K+ ++Q G+ P V YN ++ C+ + D
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
A ++ M+ MPN Y T+I L E DF
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANE-DF 647
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 50/349 (14%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
+A+ V+ + D L+ P I+R + G+ G A+ D
Sbjct: 114 FAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG---EALSLLDD 170
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M GC+ +V + L+ + +S L E+ K +I ++N++I C G
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREG 229
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF- 259
+D A + + G +PD ++YTT++ R E L+ M+ K C PN TF
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 260 ----------------------------------NVRIQHLVNKRRSWQANKLMGLMQRF 285
N+ I + + R A + + M +
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G PD ++Y V+KG CR+ + AK++ M+ + PN + T I LCQ+G A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQ-----------PCKANTI 383
++ + + ++ T +AL+ G + PCK NTI
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+Y C + +++L + +R L+A E+ D+F++N ++ +C G L
Sbjct: 78 VYLCTKLIRNLCRRGRTSDAARVLRA--------AERSGTAVDVFAYNTLVAGYCRYGQL 129
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A ++ M V PD TYT +I R L + M+ +GC P++ T+ V
Sbjct: 130 DAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVL 186
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ + QA +++ M+ G P+ VTYN++I G CR G +D A++ + +
Sbjct: 187 LEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 246
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
P+ Y T++ LC + + + M+KN +P+ T L+
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A +M YGC S LK L + + + L E+ K + +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPPNE 390
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN I C+ G++++A +++ +M + G + +++TY L++ F R + L+
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 450
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M CK PN T+ + L N R A +L+ M + P+ VT+N+++ FC+ G
Sbjct: 451 MPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ M+ PN Y T++ + ++ + A + + P + T S+
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
++ L + ++ +A + +VQ
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQ 589
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G P++ I++L + R+ A +++ +R G D YN ++ G+CR G LD
Sbjct: 72 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 131
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+++ ++M + P+ Y +I LC G A + D + + PSV T + LLE
Sbjct: 132 ARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 370 GLKKNN 375
+ K+
Sbjct: 189 AVCKST 194
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 39/223 (17%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA L+ L +RD A A L++ D++ +I+ C G A V+ +
Sbjct: 47 NARLRRLI-ARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+ G DV Y TL++ + R L RR
Sbjct: 106 RSGTAVDVFAYNTLVAGY-----------------------------CRYGQLDAARR-- 134
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
L+ + PD TY +I+G C G + A + ML R P+ Y ++
Sbjct: 135 -------LIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+C+ F A + + K P++ T + ++ G+ + +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 7/311 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
++ + L RR D L E K QG I +++G G + A F
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKV--QGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G + V + N + VL ++ K I+A L+EV + I ++ ++N +I+ FC
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVL--CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+G L+ A + V M G +PDVI YT LI+ + K ++ E L+N M+ G P++ T
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+ + L + A KL G+M+ +GI D Y + + G C++G L A ++++ +
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
+ + + + +I LC+ G A+ + + ++ P V T + ++ + Q
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 539
Query: 379 KANTIMALVQR 389
KAN + +++
Sbjct: 540 KANILFQKMEK 550
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 5/246 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK---AIQAFLMEVPEKFHIQFD-- 185
I A F M GC + +K L + ++ + ++ + I F
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S++I+I A C+ D+A + EM+ G+ P VI+YT+LI F + E L+N
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +G PN+ TFNV I L + + +A L+ +M + GI P+ +TYN +I+GFC G
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 361
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A++++ +M + P+ Y +I+ C+ A + ++ P V T
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 421
Query: 366 ALLEGL 371
ALL GL
Sbjct: 422 ALLTGL 427
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 113/290 (38%), Gaps = 45/290 (15%)
Query: 131 IKHAMDTFY---DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
IKH FY M L G +LN L L + A + + + +I DI
Sbjct: 109 IKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIP-DIV 167
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL-------------------- 227
++ +IK C + KA L+ MQKLG P+ ITY TL
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227
Query: 228 ---------------------ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
I A KD R + L+ M +G P + ++ I
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGF 287
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A +L M G++P+ VT+N++I C+ G + AK + M+ R ++PN
Sbjct: 288 CCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNL 347
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y ++I C GD N A + K P V + L+ G K ++
Sbjct: 348 LTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D M G + + N+ ++ DL + + + +P K + D+
Sbjct: 324 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK-GCEPDV 382
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++I +C+ +++A + M ++G +PDV TY L++ ++ + L+ +
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G +L + + + L ++A +L ++ + I+ D +N +I G C++G
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A +++ + L P+ Y MIH C+ G A I+ + K P T +
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562
Query: 367 LLEGLKKNNQPCKANTIM-ALVQRRV 391
L+ G ++ + K ++ +VQR V
Sbjct: 563 LIRGFFESKKLEKVVELLHMMVQRDV 588
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D + NI++ C + + + VM + + G PD++TYTTLI ++R
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM----QRFGI--EPDEVTYN 295
L+ M GC PN T+ ++ L A KL M +GI +P ++Y+
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
++I C+ D A+ ++ M + + P Y ++IH C G + A + + + +
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ 306
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P+V T + L++ L K + +A ++ ++QR +
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGI 343
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
++ ++ A QAF + FH+ + SF ++ ++ + + + +M+
Sbjct: 71 KTGNITATQAF-----QFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLS 125
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ PD T L++ NR G + ++ +G P++ T+ I+ L + R +A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRKIY 329
L MQ+ G P+ +TY ++KG CR+G++ +A K++ ML G P Y
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I LC++ + A + ++ + P+V + ++L+ G
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGF 287
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G + A F M +YG + L L ++ L +A++ F + ++I+ D
Sbjct: 429 QGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF--NKLKSYNIKLD 486
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I FN +I C+ G L+ A+ + ++ + ++PDV+TY +I F + + N L+
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 546
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
M GC P+ T+ I+ ++ + +L+ +M + + D
Sbjct: 547 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + GKA A++ F TV+ NA + V + +Q L+++
Sbjct: 226 ILSVLGKANQEALAVEIFARAEA-AXGNTVQVYNAMMGVYARTGRFTKVQE-LLDLMRSR 283
Query: 181 HIQFDIFSFNIVIKAFCEMG--ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ D+ SFN +I A + G + + A ++ E+++ G++PD+ITY TLISA +++ E
Sbjct: 284 GCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLE 343
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++N MV C P+L T+N I S +A +L ++ G PD VTYN ++
Sbjct: 344 EAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLL 403
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F R G++D K++ M+ + Y T+IH + G +LA+ + D
Sbjct: 404 YAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRS 463
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMA 385
P T + L++ L K N +A +M+
Sbjct: 464 PDAVTYTVLIDSLGKANMIKEAAEVMS 490
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 1/219 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +YG+ GM + A F D+ G + N+ L ++ ++ ++ K
Sbjct: 367 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV-KM 425
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D ++N +I + + G D A+ + +M+ G PD +TYT LI + K N +
Sbjct: 426 GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 485
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + M+ P L TF+ I + +A + M R GI+PD + Y++++
Sbjct: 486 AEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDI 545
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
R A K+Y M+ P+ +Y+ M+ L +E
Sbjct: 546 LLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKE 584
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 118 IMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ RIM+ L K ++ +M + K + N+ LK+ T D K +
Sbjct: 921 LYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLI 980
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E ++ D ++N +I +C ++ +M EM+++G++P + TY +LISAF K
Sbjct: 981 QEA-GLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQM 1039
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L+ ++ K C + + +++ ++ N +A KL+G+M+ G+EP T +L
Sbjct: 1040 VEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHL 1099
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++ + SG + A+KV + L + Y ++I + GD N+A
Sbjct: 1100 LMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVA 1148
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ + DM + C+ + + NA + V + ++ K + D ++N
Sbjct: 342 LEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLP-DAVTYN 400
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ AF G +DK + +M K+G D +TY T+I + K + ++ L++ M
Sbjct: 401 SLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLS 460
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T+ V I L +A ++M M ++P T++ +I G+ ++G A
Sbjct: 461 GRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEA 520
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + ML + P+ Y M+ L + + A + ++ + ++ P +L
Sbjct: 521 EETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRV 580
Query: 371 LKKNNQ 376
L K N+
Sbjct: 581 LGKENR 586
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIGNGLWNL 246
S N +++A G LD+ Y+V+ E+Q +G K + T ++ AF + N E+ ++
Sbjct: 851 SVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKK-IYQG 909
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G FP + + + I L +R ++ M+ +PD +N V+K + G
Sbjct: 910 MKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGD 969
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+VY + L P+ Y T+I C++ + + + P +DT +
Sbjct: 970 FKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKS 1029
Query: 367 LLEGLKK 373
L+ K
Sbjct: 1030 LISAFGK 1036
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A + +M+ GV+P Y +++ + K PE + L + KG + + + +
Sbjct: 726 EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGV 785
Query: 264 QHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
K + WQ A L+G +++ D +N +I + SG + A+ +++ M+
Sbjct: 786 IEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP 845
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P ++ L +G + Y++ ++ + S +I+ +L+
Sbjct: 846 SPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAF 894
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAF-----YKDNRPEIGN- 241
+ ++ +C+MG + A+ ++ + ++ G+ DV +T +I A+ ++ +G+
Sbjct: 746 YRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSL 805
Query: 242 ---------GLWNLMV----CKGCF----------------PNLATFNVRIQHLVNKRRS 272
+WN ++ GC+ P + + N +Q L+ R
Sbjct: 806 RQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRL 865
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ ++ +Q G + + + L++ F +G++ KK+Y M P +Y+ M
Sbjct: 866 DELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIM 925
Query: 333 IHYLCQ 338
I L +
Sbjct: 926 IGLLAK 931
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 136/261 (52%), Gaps = 2/261 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ +Y + G+ K+A+ F +M G +++S N+ L L ++ + ++ + +
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH-YVYQQMIRV 220
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+F +I++ AFC+ G +D+A + +M+ LGV+P+++TY +LI+ + E
Sbjct: 221 GIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAA 280
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIK 299
G+ M KG N+ T+ + I+ + + +A K++ G+ + + PDE Y ++I
Sbjct: 281 KGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLID 340
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G+CR+G +D A ++ ML L N I ++I+ C+ G+ + A + + N P
Sbjct: 341 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400
Query: 360 SVDTISALLEGLKKNNQPCKA 380
+ + LL+G + +A
Sbjct: 401 DSYSYNTLLDGYCREGHTSEA 421
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 18/314 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMIK 132
R +++ F +S L + E + + K L +G R ++ Y KA +
Sbjct: 501 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP-DGITYRTLIDGYCKASNVG 559
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A M +++ N+ + L +SR L L E+ + + +I ++ +
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR-GLTPNIVTYGAL 618
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +C+ G+LDKA+ EM + G+ ++I +T++S Y+ R + N L MV G
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678
Query: 253 FPNLATF---NVR---IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
FP+ F ++R IQ + A+ L + F + P+ + YN+ I G C++G
Sbjct: 679 FPDHECFLKSDIRYAAIQKI--------ADSLDESCKTF-LLPNNIVYNIAIAGLCKTGK 729
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A++ +S + + +P+ Y T+IH G+ + A+ + + +++ VP++ T +A
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 367 LLEGLKKNNQPCKA 380
L+ GL K+ +A
Sbjct: 790 LINGLCKSENVDRA 803
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + ++N ++K C +G D A + M K GV PD + Y+TL+ +K E +
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAS 492
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW ++ +G + TFN I L + +A ++ M+ G PD +TY +I G+
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ ++ A KV AM + P+ ++Y ++I L + + + + P++
Sbjct: 553 CKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNI 612
Query: 362 DTISALLEGLKKNNQPCKA 380
T AL++G K KA
Sbjct: 613 VTYGALIDGWCKEGMLDKA 631
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 118/259 (45%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G ++ A M G R V + +K + + + L + E+ +
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ ++I +C G +D A ++ EM +LG+K ++ +LI+ + K G+
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV P+ ++N + + + +A L M + GIEP +TYN ++KG CR
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A +++ M+ + P+ Y T++ L + +F A + KD + + + S T
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510
Query: 365 SALLEGLKKNNQPCKANTI 383
+ ++ GL K + +A I
Sbjct: 511 NTMISGLCKMGKMVEAEEI 529
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+NI I C+ G +D A + G PD TY TLI + + L + M+
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ T+N I L +A +L + + G+ P+ VTYN +I G+C+ G++D
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
A K+ M+ + P+ Y +I+ LC+ GD
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
E +P R G ++ Y + G I A+ +M G K + N+ + +
Sbjct: 324 EEAALVPDERAYGVLID---GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
++ + + + + ++++ D +S+N ++ +C G +A+ + +M + G++P V+T
Sbjct: 381 GEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 439
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y TL+ + + +W+LM+ G P+ ++ + L A+ L +
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G +T+N +I G C+ G + A++++ M P+ Y+T+I C+ +
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559
Query: 344 LAYIMCKDSMKKNWV-PSVDTISALLEGLKKN 374
A+ + K +M++ + PS++ ++L+ GL K+
Sbjct: 560 QAFKV-KGAMEREXISPSIEMYNSLISGLFKS 590
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S N ++ + G A+ V +M ++G+ PDV + +++AF KD + + G M
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 252
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN+ T++ I V+ A ++ M G+ + VTY L+IKG+C+ +
Sbjct: 253 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 312
Query: 308 DMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A+KV M L+P+ + Y +I C+ G + A + + ++ ++ ++
Sbjct: 313 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 372
Query: 367 LLEGLKKNNQPCKANTIMA 385
L+ G K + +A ++
Sbjct: 373 LINGYCKRGEIHEAEGVIT 391
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F++++K + E G+ A V M K G P + + +L++ K+ + ++ M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ ++ + + +A + M+ G+EP+ VTY+ +I G+ G ++
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
AK V M + + N Y +I C++
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I C+ +D+A + ++ + G+ P+V+TY TLI + K + L
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY-NLVIKGFCR 303
+ M+ +G P++ T++ I L ++ KL+ M + G++ + Y LV GF
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKT 902
Query: 304 SGHLDMAK 311
S + +M+K
Sbjct: 903 SNYNEMSK 910
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+L + N + +LV + A+ + M R GI PD ++++ FC+ G +D A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
M + PN Y ++I+ GD A + K +K +V T + L++G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 371 LKKNNQPCKANTIMALVQRR 390
K + +A ++ +Q
Sbjct: 306 YCKQCKMDEAEKVLRGMQEE 325
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 150/347 (43%), Gaps = 36/347 (10%)
Query: 87 VSRLAGARRFDYI-EHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYG 145
V+ L +R+F + + L+E ++S + I + Y +A + A+ F M +G
Sbjct: 119 VNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFG 178
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ---------------------- 183
+ +V L+ L VL + + +K Q F V KF +
Sbjct: 179 LRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARK 238
Query: 184 -----------FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
D+ ++N +++A C+ G +D+AY + E+ GV+PD +Y I A+
Sbjct: 239 VFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYC 298
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ N + + M PN+ T+N I+ L + A +L+ M G+ PD
Sbjct: 299 EANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAW 358
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+YN ++ C ++ A K+ S M+ +P+R Y ++ L + G F+ A + +
Sbjct: 359 SYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESM 418
Query: 353 MKKNWVPSVDTISALLEGL--KKNNQPCKANTIMALVQRRVPHFSSN 397
++ + PSV T S ++ GL KK ++ +P ++S
Sbjct: 419 GERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYAST 465
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 104/191 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G L +
Sbjct: 136 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 315
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 316 TLIDGCCKEGD 326
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y + LCQEG A M ++ +
Sbjct: 316 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 376 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 409
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT L S ++ R +
Sbjct: 312 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P+ T+ + I K W+ +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGY-PASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 152
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 153 GLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDA 212
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L P+ Y T+I+
Sbjct: 213 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 272
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L+ G K
Sbjct: 273 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGD 313
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + G LD+ + + M GV+PDV TY
Sbjct: 138 DIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTY 196
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN TF I R A ++ M
Sbjct: 197 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 256
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I+ C+EGD +
Sbjct: 257 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDS 316
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ G + + A ++
Sbjct: 317 AFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKML 356
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +M + K G I+ A F + +G + +V S N + DL + F ++
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLD--EGFXLKS 182
Query: 177 PE-KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 183 XMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 302
Query: 296 LVIKGFCRSGHLDM-----------------------------------AKKVYSAMLGR 320
+I G C+ G LD A+K+ ML
Sbjct: 303 TLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSV 362
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
L P+ + Y +I+ C+ GD + K+ + VPSV T + L+ G
Sbjct: 363 GLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 143 LYGCKRTVK-------SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
L G RT+ S N+ L L +++ + A + + + D+ S++I+I
Sbjct: 107 LQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDG 166
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
FC++ L +A + +M L P+V TY ++ + R G++ M+ GC P+
Sbjct: 167 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T++ I R+ QA++L M G P+ VTYN ++ G C+ D A +++
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M+ R P++ Y T+++ C G A + + + K P V + LL+G +
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 346
Query: 376 QPCKANTIMALVQRR 390
+P +A + ++ R
Sbjct: 347 KPGEARQLFQVMVSR 361
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 6/240 (2%)
Query: 105 HQKSLPQGRREGFIMRIMMLYGKAGMIKH--AMDTFYDMHLYGCKRTVKSLNAALKVLT- 161
+++ + G I +++G + KH A + F M GC+ + N L L
Sbjct: 215 YEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCK 274
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
ES+ +A + F V D ++ ++ FC +G +++A V EM G PDV
Sbjct: 275 ESKPDEAHELFRKMVERG--CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDV 332
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ Y L+ F++ +P L+ +MV + C P+ + N+ I L +R A ++
Sbjct: 333 VAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392
Query: 282 M-QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M Q G PD VTYN +I G C L A KV+ + +L P+ + ++ + G
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 4/247 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
+ G I A + +M GC V + + + + +R K QA L E + +
Sbjct: 204 RKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR--KHDQAHELFEAMISRGCRPN 261
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N ++ C+ D+A+ + +M + G PD +TYTTL+ F + E +++
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV KG P++ +N ++ + +A +L +M +PD V++N++I G ++
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381
Query: 306 HLDMAKKVYSAM-LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A +V+ M P+ Y ++I LC E + A + K+ + P
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 441
Query: 365 SALLEGL 371
+ LLE +
Sbjct: 442 NVLLEAM 448
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 7/215 (3%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L+++T++ DL +ME+ EK + + +FN +I A+ G L+K + V+ +MQ+ G
Sbjct: 417 LEMVTKAEDL------VMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+K DVI++ +++ AF K+ + + + M+ K PN +N I + + QA
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 529
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L+ M+ G+ VTYNL++KG CRS +D A+++ + + L P+ Y T+I
Sbjct: 530 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 589
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
C +GD + A + ++ K P++ T L+ L
Sbjct: 590 CNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M+ A D +M G +V++ N + + L+ L ++ +K I+ D+ SF
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKSDVISF 477
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
V+KAFC+ G + +A ++ +M V P+ Y ++I A+ + E L M
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 537
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G ++ T+N+ ++ L + +A +L+ ++ G+ PD V+YN +I C G D
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A ++ M + P + Y T++ L G + + + + KN PS
Sbjct: 598 ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPS 648
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I +C++ L A+ + +M+ ++PD ITY LI+ K L M
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ TFN I + + ++ MQ+ GI+ D +++ V+K FC++G +
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M+ + + PN ++Y ++I + GD A+++ + S+ T + LL
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551
Query: 369 EGLKKNNQ 376
+GL +++Q
Sbjct: 552 KGLCRSSQ 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG ++ DM G K V S + +K ++ + A L ++ K +
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK-DVAP 507
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +N +I A+ E G ++A+L++ +M+ GV ++TY L+ + ++ + L
Sbjct: 508 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G P++ ++N I NK + +A +L+ M ++GI P TY+ ++ +
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
G + + +Y ML + + P+ IY M+ AY+ C++ K
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVD----------AYVRCENDSK 667
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--GVKPDVITYTTLISAFYKDNRPEIGNG 242
D F++N V++A G LD A ++ M + PD +Y +I+ ++ +
Sbjct: 156 DTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 215
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ MV G PN T+N I V +L M G +P+ VTYN+++ G C
Sbjct: 216 VFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC 275
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R+G +D + + M + P+ Y + L + G+ + +S+KK +
Sbjct: 276 RAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 335
Query: 363 TISALLEGLKKNNQPCKANTIMALV 387
T S LL GL K+ + KA ++ ++
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEML 360
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 97/235 (41%), Gaps = 35/235 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+N+VI G A V EM +GV P+ ITY T+I K E G L
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+ M+ G PN+ T+NV + L R + LM M + PD TY
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312
Query: 295 -------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++++ G C+ G + A++V ++ L+P IY
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I+ CQ D A+ + + ++ P T +AL+ GL K KA ++
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N+++ C G +D+ ++M EM + PD TY+ L + L+
Sbjct: 263 NIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLF 322
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG T ++ + L + +A +++ ++ G+ P V YN +I G+C+
Sbjct: 323 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQV 382
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M R + P+ Y +I+ LC+ A + + K PSV+T
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++ Q K T+++ +Q++
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQK 468
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ Y ++G + A M G ++ + N LK L S + + + + +
Sbjct: 515 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ- 573
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ S+N +I A C G DKA ++ EM K G++P + TY TL+SA R
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 633
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
L+ M+ K P+ + + + + V + L M GI D+
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-----PDEVTYNLVI 298
+ L+V G P+ +N +Q V + + + +++R G PD +YN+VI
Sbjct: 145 FGLLVAAGARPDTFAWNKVVQACV---AAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVI 201
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G RSG A KV+ M+ ++PN Y TMI + GD + + +
Sbjct: 202 AGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPK 261
Query: 359 PSVDTISALLEGL 371
P++ T + LL GL
Sbjct: 262 PNIVTYNVLLSGL 274
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++IKA C+ G++DKA+ + EM G KP+V TYT LI +D + E NG+ M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V FP++ T+N I R A +L+ +M++ +P+ T+N +++G CR G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A + ML L P+ Y +I LC+EG N AY + + P T +A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ K + A+ + L+ R+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRK 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S++I+I CE+G L++A+ + +M + G +P TYT LI A + L++ M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +GC PN+ T+ V I L + +AN + M + I P +TYN +I G+C+ G +
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + M R PN + + ++ LC+ G A + K + P + + + L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 368 LEGLKKNNQ 376
++GL +
Sbjct: 448 IDGLCREGH 456
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F++E K I S N+++ + + + ++ ++ KLG+ P V+TYTTL+
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + LM GC PN+ + + I L R +A KL+ MQ G+ P+
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH--YLCQEG 340
VTY +++KG+ +G LD A + AM+ R N +IY +++ L Q+G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + ++ A C+ G + A + M ++ K+G D T+L+ F + +++
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 246 LMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + C PN ++++ I L R +A L M G +P TY ++IK C
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M+ R PN Y +I LC++G A +C+ +K PSV T
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+AL+ G K+ + A ++ ++++R
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKR 400
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 195 AFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC + + D + V +++ P+ ++Y+ LI + R E GL + M KGC
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+ V I+ L ++ +A L M G +P+ TY ++I G CR G ++ A V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ R+ P+ Y +I+ C++G A+ + K+ P+V T + L+EGL +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 374 NNQPCKA 380
+P KA
Sbjct: 419 VGKPYKA 425
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 36/261 (13%)
Query: 164 RDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+D + + AF L+ V EK + ++ +FN +++ C +G KA ++ M G+ PD++
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+Y LI ++ L + M C P+ TF I + ++ A+ +GLM
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGH--------------------------LDMAKKVYS- 315
R GI DEVT +I G C+ G LDM K
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 316 ----AMLGR----RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
AMLG+ L+P+ Y T++ L + GD ++ + + +P+V + +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 368 LEGLKKNNQPCKANTIMALVQ 388
+ GL + + +A +++ +Q
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQ 643
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 37/227 (16%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR--- 236
F I+ D +F +I AFC+ G D A + M + G+ D +T TTLI K +
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 237 ----------------PEIGNGLWNLMVCKGC-----------------FPNLATFNVRI 263
P N + + M+ KGC P++ T+ +
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILD-MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L+ + +++ LM+ G P+ Y ++I G C+ G ++ A+K+ SAM +
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
PN Y M+ G + A + +++ + + S+LL+G
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++ + I+I C+ G +++A ++ MQ GV P+ +TYT ++ + + + +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-------NKRRSWQA------------NKLMGLMQRF 285
MV +G N ++ +Q V N S + N+L+ ++++
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G + LV + C+ G D + + +L R + + + M Y C +
Sbjct: 735 GGCISGLCIFLVTR-LCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESY-CSKKKHTKC 792
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ +K +VPS + +++GLKK +A ++
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELV 831
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 3/177 (1%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
CE +L Y + G + + Y++L+ + K + + + M G +
Sbjct: 136 CEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGM 195
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+ + L + A M + + G D ++ GFCR +L A KV+
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISALLEGL 371
M PN Y +IH LC+ G A+ + KD M +K PS T + L++ L
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLIKAL 311
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 175/418 (41%), Gaps = 82/418 (19%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
+ + +F H +I + V+ L +RF I LL K G + I
Sbjct: 40 EAQAVFNNLTEEGHKPTLI----TYTTLVAALTRQKRFKSIPALL--SKVADNGMKPDSI 93
Query: 119 MRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL-TESRDLKAIQAFLME 175
+ M+ + ++G + AM F M YGCK T + N +K R ++++ M
Sbjct: 94 LLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEM- 152
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + +++ + ++NI+I+A+C L++A+ V+ +M G++PDV+TY T+ A+ ++
Sbjct: 153 MGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNG 212
Query: 236 RPEIGNGL-----WNLM-------------VCK-----------------GCFPNLATFN 260
E L +N++ CK G PN FN
Sbjct: 213 ETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFN 272
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGI--------------------------------- 287
I+ ++ + ++ + LM+ FGI
Sbjct: 273 SLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKA 332
Query: 288 --EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
EPD Y+++ KG+ R+G A+ + ++M + PN I+ T+I C G + A
Sbjct: 333 GIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRA 392
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPHFSSNQLSA 401
+ +C+ + P++ T L+ G + QP KA ++ ++ R VP S+ QL A
Sbjct: 393 FRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVA 450
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
L GK G A F ++ G K T+ + + LT + K+I A L +V + ++
Sbjct: 32 LIGK-GKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADN-GMK 89
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D N +I AF E G +D+A + +M++ G KP TY TLI F RP L
Sbjct: 90 PDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKL 149
Query: 244 WNLM-VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+M + PN T+N+ IQ K++ +A ++ M GI+PD VTYN + + +
Sbjct: 150 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 209
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
++G + A+++ M + PN + +I C+EG+
Sbjct: 210 QNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNM 249
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I+ DI +++I+ K + G KA ++ M K GV+P+V+ +TT+IS + + +
Sbjct: 331 KAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMD 390
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M G PNL T+ I ++ W+A +L+ M+ G+ P+ T LV
Sbjct: 391 RAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVA 450
Query: 299 KGFCRSGHLDMAKKV 313
+ G A ++
Sbjct: 451 DAWRAIGLFKEANRI 465
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%)
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T L++ +P ++N + +G P L T+ + L ++R L+ +
Sbjct: 26 TKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD 85
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
G++PD + N +I F SG +D A K++ M P Y T+I
Sbjct: 86 NGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLI 134
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I F + G+LD+AY V+ EM + G P ++TY LI+ R E GL M
Sbjct: 160 TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V KG P++ +++ I + +A ++ M + PD VTY+ +I+G C L
Sbjct: 220 VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ ML +L P+ Y T+I+ C+EGD N A + + ++K ++P T + L
Sbjct: 280 TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVL 339
Query: 368 LEGLKK 373
+ GL K
Sbjct: 340 INGLNK 345
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 102 LLEHQKSLPQGRREGFIMRIM----MLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNA 155
L E + L + R GFI I+ ++ G G ++ A+ DM G V S +
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 156 ALKVLTESRDLKAIQAFLMEVPE-KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
+ +++L +AF M+V + D +++ +I+ CE L +A + EM
Sbjct: 234 IISGFARNQELD--RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLT 291
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
+ + PD TYTTLI+A+ K+ L + M+ KG P+ T+NV I L + RS +
Sbjct: 292 IKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKE 351
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVI---------------KGFCRSGHLDMAKKVYSAMLG 319
A +L+ + P VTYN +I KGFC G +D A +V+ +M+
Sbjct: 352 ARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMIN 411
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
+ PN IY +IH C+ G+ AY + K+ + ++VP T+ AL++ L +
Sbjct: 412 KNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGE 471
Query: 380 ANTIMALVQR 389
N ++ + R
Sbjct: 472 LNEVIGDILR 481
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K A M L G + + + N + L LK L+E+ K ++
Sbjct: 28 YCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVP- 86
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N ++ +C+ G +A ++ EM + G+ P+V+TYT+LI++ K +
Sbjct: 87 DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF 146
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ I + +A +++ M R G P VTYN +I G C
Sbjct: 147 DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVL 206
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A + M+G+ ++P+ Y T+I + + + A+ M + + K+ +P T
Sbjct: 207 GRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTY 266
Query: 365 SALLEGL 371
S+L++GL
Sbjct: 267 SSLIQGL 273
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 100/186 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I +C++ D+A+ + M G++P++IT+ +I+ +D R + + +
Sbjct: 17 NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P+ T+N + + QA L M R G+ P+ VTY +I C++
Sbjct: 77 VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L+ A + + M R L PN + Y T+I+ Q+G + AY + + + ++PS+ T
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196
Query: 365 SALLEG 370
+AL+ G
Sbjct: 197 NALING 202
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
EM++ G P+V+TY T+I + K R + G M KG PNL TFN+ I L
Sbjct: 8 EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R + ++++ M R G PDEVTYN ++ G+C+ G+ A +++ M+ L PN Y
Sbjct: 68 RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++I+ +C+ G+ N A + P+ T + ++ G +
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN+ T+N I +R+ +A + M G+EP+ +T+N++I G CR G L
Sbjct: 13 GCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+V M + +P+ Y T+++ C+EG+F+ A ++ + ++ P+V T ++L+
Sbjct: 73 SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLI-- 130
Query: 371 LKKNNQPCKANTI 383
N CKA +
Sbjct: 131 ----NSMCKAGNL 139
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + N+ ++ L L ++ E+ I ++ +F+
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 330
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T+N I+ +R + +L M + G+ + VTY +I GF ++ D A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ ++P+ Y ++ LC G A ++ + + P + T + ++EG
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 511 M------CKAGKV 517
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I ++++++I+I FC L A V+ +M KLG +PD++T +L++ F
Sbjct: 103 LGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC 162
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
NR L MV G P+ TFN I L R+ +A L+ M G +PD V
Sbjct: 163 HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G +D+A + M ++ P IY T+I LC + N A + +
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T ++L+ L + A+ +++ +++R++
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + DI + N ++ FC + A ++ +M ++G +PD T+ TLI ++ NR
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV KGC P+L T+ + + L + A L+ M++ IEP V YN +I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C +++ A +++ M + + PN Y ++I LC G ++ A + D +++
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P+V T SAL++ K + +A
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEA 345
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 14/239 (5%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K++N AL + TE D K I+ ++ ++N +I+ C G A ++
Sbjct: 270 KNVNDALNLFTE-MDNKGIRP-------------NVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + + P+V+T++ LI AF K+ + L++ M+ + P++ T++ I
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A + LM P+ VTYN +IKGFC++ +D +++ M R L+ N Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+IH Q + + A I+ K + +P + T S LL+GL N + A + +QR
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + GC+ + + + L + D+ + L ++ E+ I+ + +N +I A C
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYK 270
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++ A + EM G++P+V+TY +LI R + L + M+ + PN+ TF+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN Y T+I C+ + + ++ ++ V + T + L+ G
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK FC+ +D+ + EM + G+ + +TYTTLI F++ + ++
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + A + +QR +EPD TYN++I+G C++
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ ++ + + PN Y TM+ C++G A + ++ ++ +P T
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 575 NTLIRAHLRDGDKAASAELI 594
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ IV+ C+ G +D A ++ +M++ ++P V+ Y T+I A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T+N I+ L N R A++L+ M I P+ VT++ +I F
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 363 TISALLEGLKK 373
T + L++G K
Sbjct: 398 TYNTLIKGFCK 408
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ ++ TY+ LI+ F + ++ + +
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T N + + R A L+G M G +PD T+N +I G R
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M+ + P+ Y +++ LC+ GD +LA + K + P V +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 366 ALLEGL 371
+++ L
Sbjct: 261 TIIDAL 266
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ E ++ ++ DI+++NI+I+ C+ G ++ + + + GVKP+V+TYTT++S F
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ E + L+ M +G P+ T+N I+ HL + ++ A +L+ M+ D
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA-ELIREMRSCRFVGDA 606
Query: 292 VTYNLVIKGFCRSGHLD 308
T LV G LD
Sbjct: 607 STIGLVTN-MLHDGRLD 622
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + +M K P ++ ++ L+SA K N+ ++ L M G NL T+++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++ M + G EPD VT N ++ GFC + A + M+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + + A + + K P + T ++ GL K
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 1/292 (0%)
Query: 93 ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
R +D I LL+ +S E ++ G+ G+I A + F + G K +
Sbjct: 271 GRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVT 330
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
NA L V ++ + L E+ E + D ++N V+ A+ G ++ +V+ M
Sbjct: 331 YNALLHVFGKAGIFSEALSVLSEMEEN-NCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAM 389
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
G+ P+ +TYTT+I+A+ + + +++ M+ GC PN+AT+N + L K S
Sbjct: 390 ASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLS 449
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ K++G M+ G P+ +T+N ++ + G +V+ M P+R + T+
Sbjct: 450 EEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTL 509
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
I + G N A M ++ +K + P ++T +ALL L + A +++
Sbjct: 510 ISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVI 561
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 1/255 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ ++GKAG+ A+ +M C + N + + A +++
Sbjct: 334 LLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRA-GFHEEGAVVIDAMASK 392
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I + ++ +I A+ +G +DKA + +M +LG P+V TY ++ K + E
Sbjct: 393 GIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEM 452
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M GC PN T+N + K N++ M+ G EPD T+N +I
Sbjct: 453 MKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISA 512
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ R G + A K++ M+ P Y +++ L + GD+ A + D K + PS
Sbjct: 513 YGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPS 572
Query: 361 VDTISALLEGLKKNN 375
+ S ++ K
Sbjct: 573 ETSYSLMVHSYAKGG 587
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 36/254 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG+ G A +M G + + NA L L D KA ++ ++++ K
Sbjct: 513 YGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPS 572
Query: 185 DIFSFNIVIKAFCEMG------ILDKAY--------------LVMVE------------- 211
+ S+++++ ++ + G +++K+ LV+
Sbjct: 573 ET-SYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAF 631
Query: 212 --MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+QK G KPD++ +++S F K+N + + + L+ G P+L T N +
Sbjct: 632 QALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARG 691
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
W+A +++ ++Q G +PD V+YN VIKGFCR G + ++ S M + P Y
Sbjct: 692 GDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTY 751
Query: 330 QTMIHYLCQEGDFN 343
T I +G F
Sbjct: 752 NTFISGYAAQGMFT 765
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ YG+ G I A++ F M GC V + NA L +L + K++ +M++
Sbjct: 404 IINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGK----KSLSEEMMKILGHM 459
Query: 181 HIQF---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ + ++N ++ + G+ V EM+ G +PD T+ TLISA+ +
Sbjct: 460 KLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSN 519
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL-MQRFGIEPDEVTYNL 296
+ M+ G P + T+N + L +R W+A + + L M+ G P E +Y+L
Sbjct: 520 NDAAKMHEEMIKAGFSPCINTYNALLNALA-RRGDWKAAESVILDMRNKGFRPSETSYSL 578
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM--- 353
++ + + G++ + + ++ + P+ + +T++ LA C+
Sbjct: 579 MVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLV----------LANFKCRSLTGME 628
Query: 354 -------KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
K + P + +++L KNN +A+ ++ L+
Sbjct: 629 RAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIH 670
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D+ + N ++ + G KA V+ +Q G KPD+++Y T+I F + + G
Sbjct: 674 LQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGI 733
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + M G P + T+N I + + N ++ M P+E+TY +V G+
Sbjct: 734 RILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGY 793
Query: 302 CRSGHLDMA 310
C++ D A
Sbjct: 794 CKARRYDEA 802
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A QA +K + D+ N ++ F + + D+A+ ++ + G++PD++T+ +
Sbjct: 629 RAFQAL-----QKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNS 683
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L+ + + + ++ G P+L ++N I+ K + +++ M G
Sbjct: 684 LMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIG 743
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ P TYN I G+ G V S M+ PN Y+ + C+
Sbjct: 744 VGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCK 795
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW-QANKL 278
DV YTT++ A+ + + ++ M G P+L T+NV + RSW + +L
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ M+ G++ DE T + V+ R G +D A++ +S + P Y ++H +
Sbjct: 281 LDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
G F+ A + + + N P T + ++
Sbjct: 341 AGIFSEALSVLSEMEENNCPPDAVTYNEVV 370
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N+++ FC+ G LD A+ ++ + K G VI Y LI+ ++ R E + +
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + P++ + + I+ L + R +A L+G M G+ PD + YN +IKGFC
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+LD A+ + + PN Y +I +C+ G N A + K+ K +PSV T
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446
Query: 365 SALLEGLKKNNQ 376
++L+ GL K N+
Sbjct: 447 NSLINGLCKANR 458
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 157/344 (45%), Gaps = 36/344 (10%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D L QL + H VI + ++ L ARR++ E + +QK L + + +
Sbjct: 286 DAFTLLQLLTKDGHILGVI----GYGCLINGLFRARRYE--EAHMWYQKMLRENIKPDVM 339
Query: 119 MRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ +M+ G + G + A+ +M G + NA +K + L ++ +E+
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 177 PEKFHIQFDIF----SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ D F +++I+I C+ G+++KA + EM+KLG P V+T+ +LI+
Sbjct: 400 SKH-----DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Query: 233 KDNRPEIGNGLWNLM-----------VCKGC--FPNLATFNVRIQHLVNKRRSWQANKLM 279
K NR E L+ M + +G ++A+ V ++ L +A KL+
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ G+ PD TYN++I GFC+ G+++ A K++ M + MP+ Y T+I L +
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
G A + + +KK VP T ++ C+ N I
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIM------TWSCRENNI 612
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 7/246 (2%)
Query: 150 VKSLNAALKVLTES-----RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
+K + A VL E+ D KA+++F + F + D+F+FN+++
Sbjct: 124 IKISSEAFSVLIEAYSEAGMDEKAVESF--SLMRDFDCKPDLFAFNLILHFLVRKEAFLL 181
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V +M K + PDV+TY LI K + + L++ M +G PN +++ +
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L ++ + A +L M+ G D +TYN+++ GFC+SG+LD A + + +
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I+ L + + A++ + +++N P V + ++ GL + + +A T++
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361
Query: 385 ALVQRR 390
+ R
Sbjct: 362 GEMTER 367
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE-----K 179
Y +AGM + A+++F M + CK + + N L L +AFL+ + K
Sbjct: 138 YSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRK------EAFLLALAVYNQMLK 191
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D+ ++ I+I C+ A ++ EM G+ P+ I Y+ ++S + +
Sbjct: 192 CNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFD 251
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ M GC +L T+NV + A L+ L+ + G + Y +I
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G R+ + A Y ML + P+ +Y MI L QEG A + + ++ P
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371
Query: 360 SVDTISALLEGL 371
+AL++G
Sbjct: 372 DTICYNALIKGF 383
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHI-- 182
K G+I A F +M GC +V + N+ + L ++ L+ + ME+ K +
Sbjct: 420 KNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFL 479
Query: 183 --------QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
FDI S ++++ CE G++ KAY +++++ GV PD+ TY LI+ F K
Sbjct: 480 RLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKF 539
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
L+ M KG P+ T+ I L R+ A ++ M + G P+ TY
Sbjct: 540 GNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTY 599
Query: 295 NLVIKGFCRSGHLDMAKKVY 314
++ CR ++ +A V+
Sbjct: 600 KTIMTWSCRENNISLALSVW 619
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF-------------NIVIK 194
T+ + LKV++ I + L E P+ + F +F + +++I
Sbjct: 43 ETLDPMEDGLKVISSRIRSYTITSVLQEQPDT-RLGFRLFIWSLKSWHLRCRTVQDLIIG 101
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
+ + + V+ E++ +K ++ LI A+ + E ++LM C P
Sbjct: 102 KLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKP 161
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+L FN+ + LV K A + M + + PD VTY ++I G C++ A ++
Sbjct: 162 DLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLF 221
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQ 338
M R ++PN+ IY ++ LCQ
Sbjct: 222 DEMTDRGILPNQIIYSIVLSGLCQ 245
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 37/300 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFD 185
+AGM+ A F M YG +V S N + L+E D +K +E PE + ++
Sbjct: 194 EAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPE-VGVCWN 252
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR--------- 236
S+NI+ + C++G + +A+ ++++M+ G PDVI+Y+T+I+ + +
Sbjct: 253 TASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIE 312
Query: 237 ----------PEIGNGLWNL----------------MVCKGCFPNLATFNVRIQHLVNKR 270
P NG+ L M+ +G P+ + I
Sbjct: 313 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 372
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
A +L MQ+ I PD +TY VI G C++G + A K++ M+ +RL P+ Y
Sbjct: 373 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 432
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+I C+EG A+ + ++ P++ T +AL +GL K + AN ++ + R+
Sbjct: 433 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 492
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ + +M + G K + N + +L ++ + + L E+ + I
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE-GIAP 356
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +I FC++G + AY + EMQK + PD ITYT +I + R + L+
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MVCK P+ T+ I + + +A L M + G+ P+ VTY + G C+
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M + L N Y ++++ LC+ G+ + A + KD + P T
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L++ K+ + +A+ ++
Sbjct: 537 TTLMDAYCKSREMVRAHELL 556
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G +K A M G + + A L + ++ L E+ K ++
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK-GLEL 496
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I+++N ++ C+ G +D+A +M +M+ G PD +TYTTL+ A+ K + L
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + P + TFNV + KL+ M GI P+ TYN +IK +C
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ ++Y M + ++P+ Y +I C+ + A+ + +D + K + +V +
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 676
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+AL++G K + +A + ++R
Sbjct: 677 NALIKGFYKRKKFLEARELFEQMRR 701
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 173 LMEVPEKFH------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ME + FH ++ D ++ +I +C+ G + +A+ + +M ++G+ P+++TYT
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L K + N L + M KG N+ T+N + L QA KLM M+ G
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD VTY ++ +C+S + A ++ ML R L P + +++ C G
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+ K ++K +P+ T ++L++ Q C N + A +
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIK------QYCIRNNMRATTE 624
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I A+ DM + G + + +SR++ L ++ ++ +Q +
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTV 568
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ FC G+L+ ++ M + G+ P+ TY +LI + N ++
Sbjct: 569 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 628
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P+ T+N+ I+ R +A L M G +YN +IKGF +
Sbjct: 629 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 688
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
A++++ M L+ +R+IY EG L +C ++++K V + T
Sbjct: 689 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 46/282 (16%)
Query: 144 YGCKRTVKSLNA---ALKVLTESRDLKA----IQAFLMEVPEKFHIQFDIFS-------- 188
+ C R SL A ++ T S+DLK IQ F + + F F
Sbjct: 117 WACLRRDPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYK 176
Query: 189 --------FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD------ 234
F+I + E G+LD+A + +M G+ V + IS +D
Sbjct: 177 DWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKI 236
Query: 235 ------NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
PE+G VC N A++N+ L R +A++L+ M+ G
Sbjct: 237 ALKVFVEFPEVG-------VCW----NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI 285
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD ++Y+ VI G+C+ G L K+ M + L PN Y +I LC+ G A +
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ + + P + L++G K A + +Q+R
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 387
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I+F ++ +N +I +C++G A EM G+ P V+TYT+LIS + +
Sbjct: 255 KASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWH 314
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++N M KG PN TF I L +A +L G M+ I P EVTYN++I
Sbjct: 315 KAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMI 374
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G CRSG++ A + M+G+ +P+ Y+ +I LC G + A D K +
Sbjct: 375 EGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHK 434
Query: 359 PSVDTISALLEGLKKNNQ 376
+ SAL+ G K +
Sbjct: 435 LNNMCYSALVHGYCKEGR 452
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I +FC G +D A + +M K ++ V Y +LI+ + K ++ M
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEM 288
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ KG P + T+ I N+ +A K+ M GI P+ T+ +I G CR+ +
Sbjct: 289 IDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMM 348
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A +++ M R++MP+ Y MI C+ G+ + A+ + + + K +VP T L
Sbjct: 349 AEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408
Query: 368 LEGL 371
+ GL
Sbjct: 409 ISGL 412
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D+ + I+I + ++ EM G++PD + YT +I K +
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527
Query: 242 GLWNLMVCKGCFPNLATFNVRI-----------------------------------QHL 266
GLW++MV +GC PN+ T+ I HL
Sbjct: 528 GLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHL 587
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+A +L M + G V+YN++I+GFCR G ++ A K+ M ++P+
Sbjct: 588 TRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y T+I+ C+ + A + + K P S L+ G
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHG 690
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 27/267 (10%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V++L+A L L R + ++ ++Q DI+ ++ V+++ CE+ +KA ++
Sbjct: 96 VRTLSALLNGLLRFRRFNDVLLLFDDIVSA-NVQPDIYIYSAVVRSLCELKDFNKAKEMI 154
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRP----EIGNGL---------------------- 243
M+ K ++ Y LI K R EI N L
Sbjct: 155 HWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELL 214
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG N T+++ I + A + M + IE YN +I G+C+
Sbjct: 215 FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCK 274
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G+ AK + M+ + L P Y ++I C EG+++ A+ + + K P+ T
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYT 334
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+A++ GL + N +A + ++ R
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKER 361
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I C+ G++DKA L+ E V P+ ITY + + E L
Sbjct: 541 NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLH 600
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KG ++N+ I+ + +A KL+ M I PD +TY+ +I C+
Sbjct: 601 HAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR 659
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAYIMCKDSMKKNWV 358
+L A K++ ML + L P+ Y ++H C G+ F L M + M+ N V
Sbjct: 660 SNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHV 717
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 90/196 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I C +G + +A + ++ K K + + Y+ L+ + K+ R +
Sbjct: 401 DTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+MV +G +L + + I + + L+ M G+ PD V Y +I ++
Sbjct: 461 RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKA 520
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A ++ M+ +PN Y +I+ LC+ G + A ++ K+++ + P+ T
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580
Query: 365 SALLEGLKKNNQPCKA 380
L+ L + KA
Sbjct: 581 GCFLDHLTRGGNMEKA 596
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 35/227 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I + ++F +I C ++ +A + EM++ + P +TY +I +
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV KG P+ T+ I L + R +A + + + + + + + Y+ ++ G+
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGY 447
Query: 302 CRSGHLDMAKKVYSAMLGR-----------------------------------RLMPNR 326
C+ G A M+ R L P+
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDA 507
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
IY MI + G+ A+ + + + +P+V T +AL+ GL K
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCK 554
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 88/156 (56%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I+ C+ G++D+A+ ++ ++ G +PDVI+Y L+ A + E G L
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C PN+ T+++ I L + +A L+ LM+ G+ PD +Y+ +I FCR
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD+A + M+ +P+ Y T++ LC+ G
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD- 185
K GM+ A + ++ L GC+ V S N L+ L + + + ++ F + D
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM---FSEKCDP 331
Query: 186 -IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++I+I C G +++A ++ M++ G+ PD +Y LI+AF ++ R ++
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ GC P++ +N + L ++ QA ++ G + G P+ +YN + S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A + M+ + P+ Y +MI LC+EG + A+ + D + PSV T
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 365 SALLEGLKKNNQPCKANTI 383
+ +L G CKA+ I
Sbjct: 512 NIVLLGF------CKAHRI 524
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ EKF Q D+F++N +I FC+M +D A V+ M+ PD +TY +I +
Sbjct: 146 VMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ + N ++ C P + T+ + I+ + + +A KLM M G++PD
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN +I+G C+ G +D A ++ + + P+ Y ++ L +G + +
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T S L+ L ++ + +A ++ L++ +
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 103/200 (51%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ Q + ++ I+I+A G +D+A +M EM G+KPD+ TY T+I K+ +
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + KGC P++ ++N+ ++ L+N+ + + KLM M +P+ VTY+++I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
CR G ++ A + M + L P+ Y +I C+EG ++A + + +P
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 361 VDTISALLEGLKKNNQPCKA 380
+ + +L L KN + +A
Sbjct: 403 IVNYNTVLATLCKNGKADQA 422
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I + C G LD A V+ ++ +P VITYT LI A + + L
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P++ T+N I+ + + +A +++ ++ G EPD ++YN++++
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +K+ + M + PN Y +I LC++G A + K +K P +
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 365 SALL 368
L+
Sbjct: 372 DPLI 375
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ Y+++ ++ R D LE S LP ++ + GKA A+
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA---DQAL 423
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ F + GC S N L S D ++A+ L + I D ++N +I
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG--IDPDEITYNSMIS 481
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C G++D+A+ ++V+M+ P V+TY ++ F K +R E + MV GC P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 255 NLATFNVRIQHL 266
N T+ V I+ +
Sbjct: 542 NETTYTVLIEGI 553
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 192 VIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I FC G +A ++ EM ++ + PDV+TY LI+AF K+ + L++ M+ +
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T++ I + R A + LM G PD +T+N +I G+CR+ +D
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+ M L+ N Y T+IH CQ GD N A + ++ + P+V T + LL+G
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 371 LKKNNQ 376
L N +
Sbjct: 441 LCDNGK 446
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q L E+ E+ I D+ ++N +I AF + G +A + EM G+ P ITY+++I
Sbjct: 275 QQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMID 334
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K NR + ++ LM KGC P++ TFN I +R KL+ M G+
Sbjct: 335 GFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA 394
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +TY +I GFC+ G L+ A+ + M+ + PN T++ LC G A M
Sbjct: 395 NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 454
Query: 350 KDSMKKNWV------------PSVDTISALLEGL 371
K +M+K+ + P V T + L+ GL
Sbjct: 455 K-AMQKSKMDIDASHPFNGVEPDVQTYNILISGL 487
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 16/333 (4%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM--RIMMLYGKAGMI 131
R +I + + + R D EH+ + +G I ++ Y +A +
Sbjct: 320 RGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPDIITFNTLIAGYCRAKRV 377
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ ++M G + + + DL A Q L E+ + ++ + N
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS-GVCPNVVTCNT 436
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEA 496
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T+N I L + R +A ++ M P+ VT+ +I G
Sbjct: 497 EELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 556
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ N Y T+IH + G+ N A + ++ M P
Sbjct: 557 YCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
TI +L GL + +A ++ +Q V +
Sbjct: 617 TITIRNMLTGLWSKEELKRAVAMLEDLQMSVGY 649
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 46/232 (19%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+SF I++K FC L A ++ KLG P V+T++TL+ ++R L++
Sbjct: 114 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQ 173
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV--------- 297
M C PN+ TF + L + R +A L+ M G++P+++TY +
Sbjct: 174 M----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229
Query: 298 --------------------------------IKGFCRSGHLDMAKKVYSAMLGR-RLMP 324
I GFC SG A+++ ML R ++ P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ Y +I+ +EG F A + + + + +PS T S++++G K N+
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 5/204 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P VI + L+ + R ++ L M +
Sbjct: 51 SGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVP 110
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
N +F + ++ + + A G + + G P VT++ ++ G C + A +
Sbjct: 111 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDL 170
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + ++ P+ T +++G+ K
Sbjct: 171 FHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 226
Query: 374 NNQPCKANTIMALVQRRVPHFSSN 397
A ++ ++ V H N
Sbjct: 227 MGDTVSALNLLRKME-EVSHIKPN 249
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +I + G LD A+ + M+K G + D Y LI F + R L
Sbjct: 352 DAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELL 411
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P++ T+N + L ++L+G M G P VT+ +I G+C+
Sbjct: 412 GEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKV 471
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS-VDT 363
G +D A +++ +M + PN IY T+I +LC+ D +LA I D M++ VP+ V T
Sbjct: 472 GQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLA-IELFDEMREKHVPANVTT 530
Query: 364 ISALLEGLKKNNQPCKANTIMALVQ--RRVPHF 394
+ALL+GL+ N P KA +M L++ R P +
Sbjct: 531 FNALLKGLRDKNMPEKAFELMDLMREGRCTPDY 563
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--GVKPDVITYTTLISAFYKDN 235
EK + + + N ++ C +G + A E + + + + +TY+TL+ AF N
Sbjct: 273 EKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTN 332
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ L++ MV +G P+ + I L R A + M++ G + D YN
Sbjct: 333 NVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYN 392
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
++I GFCR L+ A ++ M L P+ Y T++ LC+ GDF + +
Sbjct: 393 ILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDG 452
Query: 356 NWVPSVDTISALLEGLKKNNQ 376
PSV T L+ G K Q
Sbjct: 453 GCRPSVVTFGTLIHGYCKVGQ 473
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +FN ++ A + G L + M+ V+P+V+TY L+ K R +G+ L
Sbjct: 136 DTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGR--VGDALS 193
Query: 245 NLMVCKG----CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR--FGIEPDEVTYNLVI 298
L G P++ N + L R QA K + R G P+ VTYN +
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
FCR+G++ MA ++ + M R+ PN T++ LC G A
Sbjct: 254 HAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAA 300
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + +M G + V + N L L ++ D A+ L ++ + + + +F
Sbjct: 404 LNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDG-GCRPSVVTFG 462
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I +C++G +D+A + M + G++P+ + Y TLI K + L++ M K
Sbjct: 463 TLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREK 522
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
N+ TFN ++ L +K +A +LM LM+ PD VT +++++ G D
Sbjct: 523 HVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRL 582
Query: 311 K 311
K
Sbjct: 583 K 583
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 4/248 (1%)
Query: 111 QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
+G IM M+ G +AG + A M G + K+ N + + L
Sbjct: 347 EGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNE 406
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
L E+ E +Q D++++N ++ C+ G ++ +M G +P V+T+ TLI
Sbjct: 407 AYELLGEMKEA-GLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLI 465
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ K + + ++ M G PN +N I L R + A +L M+ +
Sbjct: 466 HGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVP 525
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN-LAYI 347
+ T+N ++KG + A ++ M R P+ ++ +L G+ + L +
Sbjct: 526 ANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHF 585
Query: 348 MCKDSMKK 355
M D+ K
Sbjct: 586 MQHDTTPK 593
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG------IEPDEVTYNLVIKGFCRSGHL 307
P+ + FN + L QA L G+ Q F + P+ VTY +++KG C++G +
Sbjct: 135 PDTSAFNTLLDALA------QAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRV 188
Query: 308 DMAKKVYSAMLGRR--LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
A V M G + P+ + ++ LC+ G A ++ M+
Sbjct: 189 GDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y + G ++ A+D + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + + ANKL M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y +I+ LC++GD A+ + + P
Sbjct: 257 HCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KITYTTLIDGCCKEGD 332
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ D+++++++I C+ +D A + EM + G+ P+ +T+TTLI K+
Sbjct: 202 AMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 262 WVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 37/290 (12%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK--AIQAFLMEVPEKFHIQFDIFSF 189
+H + ++ M + C + S +L + SR K A F + K + DI+ F
Sbjct: 16 RHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 75
Query: 190 NIVIKAFCEMGILDKA------------------------------YLVMV-----EMQK 214
+ +I A+ E+G L A Y +V E+ +
Sbjct: 76 SGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILE 135
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
G + + L+ F K+ + +++ + G P++ ++N + + +
Sbjct: 136 CGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDE 195
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+L M G+ PD TY+++I G C+ +D A K++ ML + L+PN + T+I
Sbjct: 196 GFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLID 255
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
C+ G +LA + K + ++ +P + T +AL+ GL K +A+ ++
Sbjct: 256 GHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLI 305
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 6/244 (2%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D ++ F+L K+ H V + Y + ++ L + D L + L +G +
Sbjct: 192 DLDEGFRL-KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEM--LEKGLVPNSV 248
Query: 119 MRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
++ G K G + AM+ + M + + NA + L + DLK + E+
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ D ++ +I C+ G LD A+ M + ++ D + YT LIS ++ R
Sbjct: 309 SMX-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGR 367
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+
Sbjct: 368 SVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNV 427
Query: 297 VIKG 300
++ G
Sbjct: 428 LMNG 431
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+++ D+ +NI+I + +G ++ A V M K G+ P+V TY LI+ F +
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+GL + M KG ++ T+NV I L K +A KL+ M G+EP+ +TYN +I+G
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC G++ A ++ + M R N Y I Y CQ G + A + + + K VP+
Sbjct: 484 FCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPN 543
Query: 361 VDTISALLEGL 371
T + EG+
Sbjct: 544 GITYETIKEGM 554
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAY---LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++N +I +C+ G Y +++ EM + G+ P +T+ LI+ + K++
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++ M +G ++ T+N I L ++ + + KLM M+ G+ P+E+T+ V+KGFC
Sbjct: 286 VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFC 345
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A M R + P+ IY +I + G A + + KK P+V
Sbjct: 346 KKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVT 405
Query: 363 TISALLEGLKKNNQ 376
T + L+ G ++
Sbjct: 406 TYNCLITGFSRSGD 419
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE---SRDLKAIQAFLMEVPEKFHIQ 183
+ G ++ A D D+ +G +V + N+ + + + ++ + L E+ E I
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA-GIS 261
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+F ++I +C+ A V EM++ G+ V+TY +LIS + + E G L
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G PN TF ++ K AN + M +EPD V YN++I + R
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRR 381
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ A V AM + + PN Y +I + GD+ A + + +K V T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 364 ISALLEGL 371
+ L+ L
Sbjct: 442 YNVLIGAL 449
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
+Y + G ++ AM M G V + N + + S D ++ L E+ EK I+
Sbjct: 378 VYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-GIE 436
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ ++N++I A C G + KA ++ EM ++G++P+ +TY T+I F + +
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M N+ T+NV I++ + +AN L+ M + P+ +TY + +G
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556
Query: 304 SGH 306
G+
Sbjct: 557 KGY 559
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ ++ N + LV +R A K R + PD T+N VI G CR G L A V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY---IMCKDSMKKNWVPSVDTISALLEG 370
+ L P+ Y ++I C++G Y ++ K+ ++ P+ T L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 371 LKKNNQPCKA 380
KN+ A
Sbjct: 274 YCKNSNTAAA 283
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
+P + L++ R ++ + + + P++ TFN I L + +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSG------HLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +G+ P TYN +I G+C+ G H+DM K M+ + P +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK---EMVEAGISPTAVTFGV 269
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I+ C+ + A + ++ ++ SV T ++L+ GL
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 130/257 (50%), Gaps = 10/257 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A++ M L G V + N+ + L + K ++A E+ + D+
Sbjct: 216 KDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG--KVVEA--AEILKTMSCSPDL 271
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN ++ FC+ G+L +A V+ EM + + PDVITYT L++ + + ++ L
Sbjct: 272 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 331
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+V +G P++ + + L +A+KL+ M G V Y+ ++ G+CR+G+
Sbjct: 332 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGN 391
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A+++ + M+ ++P Y ++ L ++G + A + D + + +VP V T +
Sbjct: 392 VHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNT 451
Query: 367 LLEGLKKNNQPCKANTI 383
L++GL CKAN +
Sbjct: 452 LIDGL------CKANRV 462
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-D 185
K G A+ F +M K + + N + L +S +L+ + L E+ K D
Sbjct: 109 KDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPD 168
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N +I AF + +A +M+ G+ PDV+T L+S KD E + +
Sbjct: 169 IVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILD 228
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T+N I L + +A +++ M PD VT+N ++ GFC++G
Sbjct: 229 GMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAG 285
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L A +V M ++P+ Y +++ LC+ G +A+ + ++ +++ ++P V +
Sbjct: 286 MLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYT 345
Query: 366 ALLEGLKKNNQ 376
+L++GL K+ +
Sbjct: 346 SLVDGLCKSGE 356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G I+ A +M + GC+ V ++ + + ++ + L E+ ++ +
Sbjct: 353 KSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV-SINMVPPL 411
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++NIV+ + G + KA ++ ++ G PDV+TY TLI K NR L +
Sbjct: 412 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 471
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +GCFPN T + L R A L+ M R P+ V Y +I G C+S
Sbjct: 472 MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 531
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A V AM G+ + + Y+ +I + G A M + + + ++P T
Sbjct: 532 MDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKT 591
Query: 367 LLEGLKKNN 375
L E N+
Sbjct: 592 LEEAAMSNS 600
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
++F + D++ FN++I + G D+A + M+ VKP+++TY T+IS K
Sbjct: 89 DEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNL 148
Query: 238 EIGNGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
E L M+ KG P++ T+N I R +A M+ GI PD +T N
Sbjct: 149 EKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCN 208
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+++ G C+ G ++ A ++ M +P+ Y ++IH LC G A + K
Sbjct: 209 ILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK---TM 265
Query: 356 NWVPSVDTISALLEGLKK 373
+ P + T + LL+G K
Sbjct: 266 SCSPDLVTFNTLLDGFCK 283
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAGM+ A++ +M V + + L ++ L E+ + +I
Sbjct: 281 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP- 339
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ ++ C+ G +++A+ ++ EM G + V+ Y++L+S + + +
Sbjct: 340 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV P L T+N+ + L+ +A L+ + G PD VTYN +I G C++
Sbjct: 400 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 459
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A + M R PN +++ LC+ G + A+ + + +K P+V
Sbjct: 460 NRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 519
Query: 365 SALLEGLKKNNQ 376
++L++GL K+++
Sbjct: 520 TSLIDGLCKSDR 531
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D+ + NI++ C+ G +++A ++ M+ G PDVITY ++I A +
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ M C P+L TFN + +A +++ M R I PD +TY +++ G
Sbjct: 260 EILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 316
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G + +A + ++ + +P+ Y +++ LC+ G+ A+ + K+ + V
Sbjct: 317 CRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGV 376
Query: 362 DTISALLEGLKKNNQPCKANTIMA 385
S+L+ G + KA I+A
Sbjct: 377 VMYSSLVSGYCRAGNVHKAREILA 400
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F I+I+ C+ G +A + + + V PDV + LI +KD P+ L+
Sbjct: 61 NLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF 120
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVIKGFC 302
M P + T+N I L +A +L+ M R G + PD VTYN +I F
Sbjct: 121 ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK-KNWVPSV 361
R+ + A M + P+ ++ +C++GD A + D MK VP V
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEA-LEILDGMKLAGPVPDV 239
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
T ++++ L + +A I+
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEIL 262
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%)
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
++ G K DV +Y L+ K ++ ++ GC PNL TF + I+ ++
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A + + + F + PD +N++I G + G+ D A K++ M R+ P Y T+
Sbjct: 79 MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
I LC+ G+ A + ++ ++K + D ++
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
SR AIQ F E+ + D+ S+N ++ + G + V ++ G P+++
Sbjct: 5 SRPDLAIQ-FFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV 63
Query: 223 TYTTLISAFYKDNRP----EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
T+ LI K + E L V P++ FNV I L QA KL
Sbjct: 64 TFKILIRGNCKAGQAMRALEFLRALDEFSVA----PDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML--GRRLMPNRKIYQTMIHYL 336
M+ ++P+ VTYN VI G C+SG+L+ A+++ M+ G + P+ Y T+I+
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 337 CQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTIM 384
+ A ++ MK + P V T + L+ G+ K+ +A I+
Sbjct: 180 YRASRIREACAF-REKMKAAGINPDVLTCNILVSGICKDGDVEEALEIL 227
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 67/136 (49%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
++ ++N + LV ++ K+ + G P+ VT+ ++I+G C++G A +
Sbjct: 26 DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
A+ + P+ I+ +IH L ++G+ + A + ++ P + T + ++ GL K+
Sbjct: 86 RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145
Query: 375 NQPCKANTIMALVQRR 390
KA ++ + R+
Sbjct: 146 GNLEKARELLEEMIRK 161
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
RR +M+ Y +AG +++AM M G + + N A+ VL + L+
Sbjct: 168 ARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALR 227
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
FL E + I ++ ++N +IK +C++ ++ A ++ EM G PD ++Y T++
Sbjct: 228 FL-ERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFL 286
Query: 232 YKDNR-PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+D R E+ N + ++ FP+ T+N + L + +A + + + G + D
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVD 346
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+V Y+ ++ FC G +D AK++ + M+ + P+ Y +++ LC+ G A M +
Sbjct: 347 KVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQ 406
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
K P+ + +ALL GL ++ +A +M
Sbjct: 407 QMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMM 440
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 119/241 (49%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++HAM+ +M GC S + L + + +K ++ + ++ + + D ++N
Sbjct: 257 VEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYN 316
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ + G D+A + E ++ G + D + Y+ ++++F R + + N M+ K
Sbjct: 317 TLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITK 376
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P++ T+ + L + +A K++ M + G +P+ V+Y ++ G C+ G+ A
Sbjct: 377 GCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEA 436
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ + PN Y ++H L +EG + A + ++ + K + P+ I+ L++
Sbjct: 437 REMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKS 496
Query: 371 L 371
L
Sbjct: 497 L 497
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
FL E E+ Q D ++ ++ +FC G +D+A ++ EM G PDV+TYT +++
Sbjct: 334 FLRETEER-GFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGL 392
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
K + E + M GC PN ++ + L S +A ++M + P+
Sbjct: 393 CKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNA 452
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+TY++V+ G R G L A V ML + P +I LC E N A ++
Sbjct: 453 ITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEE 512
Query: 352 SMKKNWV----------------PSVDTISALLEGLKKNNQPCKANTIMALV 387
+ + ++DT +LL+ + NN+ A T A++
Sbjct: 513 CLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAII 564
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 8/281 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A + +M GC V + A + L + ++ + L ++ K + + S
Sbjct: 361 GRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQM-YKHGCKPNTVS 419
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ C+ G +A +M ++ P+ ITY+ ++ ++ + + M+
Sbjct: 420 YTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREML 479
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG FP N+ I+ L +++ +A K M G + V + VI GFC+S ++D
Sbjct: 480 TKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNID 539
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M P+ + +I L ++G A + +KK P+ T A++
Sbjct: 540 TALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVI 599
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQL-SAFKSILSK 408
+Q CK + L++ S ++ +A+ ++ K
Sbjct: 600 ------HQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEK 634
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
N++IK+ C +++A M E G + + +TT+I F + + + L + M
Sbjct: 489 EINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDM 548
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
P+ TF I L K R +A M + G++P VTY VI +C+ G +
Sbjct: 549 YLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRV 608
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ K+ ML R R Y +I LC G+
Sbjct: 609 EELIKLLGKMLSRS--KCRTAYNQVIEKLCNFGN 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 8/266 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A D +M G T +N +K L + + + F+ E + +
Sbjct: 464 REGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNR-GCAVNA 522
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F VI FC+ +D A ++ +M PD +T+T +I A K R E
Sbjct: 523 VNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMK 582
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P T+ I R + KL+G M YN VI+ C G+
Sbjct: 583 MLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKM--LSRSKCRTAYNQVIEKLCNFGN 640
Query: 307 LDMAKKVYSAML--GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A KV +L R+ N + M YL + + + C+ +N +P +
Sbjct: 641 PEAADKVVGLVLRTASRIDAN-TCHMLMESYLSKGIPLSAYKVACR-MFDRNLIPDLKLC 698
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQR 389
L + L + +A+ +M VQR
Sbjct: 699 EKLSKKLVLEGKLEEADNLMLQFVQR 724
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P++ T++V I L + + AN L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + + K P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KFTYTTLIDGCCKEGD 332
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M GV+PDV TY
Sbjct: 157 DIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY 215
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + NGL++ M+ KG PN TF I R A ++ M
Sbjct: 216 SVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I C+EGD +
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDT 335
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A ++
Sbjct: 336 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 375
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 415
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + + K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 5/310 (1%)
Query: 99 IEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK 158
++ L E K+ + G I++ K G + A F M GCK + N +
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 159 VLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
L SR+ + +AF L+ EK D ++ + C++G +D+A ++ E G
Sbjct: 550 GLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
DV+ YT L + + + L+ MV +G P+ A + I L+ ++ A K
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACK 669
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYL 336
M G +P TY +++ C +G++D A + +ML R L+ + IY +IH
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGF 729
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
C+ + A + +D + + VP+ T ++L +GL ++ + KA L+Q S
Sbjct: 730 CKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE---LLQEMAAGGSP 786
Query: 397 NQLSAFKSIL 406
+ F +IL
Sbjct: 787 PHAATFTAIL 796
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
KAG + A+ +M C T + + L ++ L +A + F + F
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I++ +I F + G + +A + EM + G +PDVIT+T +I K E +
Sbjct: 332 IYTS--LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ GC PN+ T+ IQ L R A ++M M G PD VTY ++ GFC+ G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
LD A ++ + PN ++Y ++++ LC G
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTT 226
A+ F E+ ++ + D+ +F I++ C+ G+ +KA+ V EM +G V PD +T
Sbjct: 173 AVTCF--EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
++ K R + ++ M G P+ +N I L + +A K++ M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
P EVTY +++ C++G L+ A++++ M PN IY ++IH + G A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + ++ + P V T + +++GL K+
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAGM + A + F++M G ++L+ A+ + L +++ +K + ++ EK D
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPD 259
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I + G +A V+ M P +TY L+++ K E L+
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M G PN + I R +A L M G PD +T+ ++I G C+SG
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + A K + M+ PN Y T+I L + G A+ + K + P T
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439
Query: 366 ALLEGLKK 373
LL+G K
Sbjct: 440 CLLDGFCK 447
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V +M+K G PD I Y T+I K + + + M+ K C P T+ + +
Sbjct: 243 EAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILV 302
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L +A +L +M G P+ V Y +I GF +SG + A ++ M+
Sbjct: 303 NSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYR 362
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ + MI LC+ G+F A ++ M+ P+V T + +++GL K + A I
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRI 422
Query: 384 M 384
M
Sbjct: 423 M 423
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA +K A + F M G + N + L ++ + L + K + ++
Sbjct: 237 KAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I++ + C+ G L++A + M G +P+ + YT+LI F K R + L++
Sbjct: 297 -TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P++ T V I L QA K M R G +P+ VTY +I+G + G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ M+ P+ Y ++ C+ G + A + + K + P++ S+
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 367 LLEGL 371
L+ GL
Sbjct: 476 LVNGL 480
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I + FSFNI+I++F D A M++ KPD+ T+ L+ K E
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206
Query: 239 IGNGLWNLMVCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+++ M+ G P + A ++ L+ +R +A ++ G M++ G PD + YN +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G ++GH A KV ML + +P Y +++ LC+ G A + + +
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326
Query: 358 VPSVDTISALLEGLKKNNQ 376
P+ ++L+ G K+ +
Sbjct: 327 RPNSVIYTSLIHGFAKSGR 345
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 39/285 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ A + F M G + + + +S +K + E+ E + + D+
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY-RPDV 365
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++I C+ G ++A EM + G KP+V+TYTT+I K R +
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN----------- 295
M+ GCFP+ T+ + R +A +L+ + + P+ Y+
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGS 485
Query: 296 -------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+I G C++G LD A +++ M+ P+ Y
Sbjct: 486 VEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 331 TMIHYLC--QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+I+ LC +E A+ + D K ++P T + L GL K
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCK 590
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 25/368 (6%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
+L K E+LF++ A+ N + + A + R L + +
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFR----PNSVIYTSLIHGFAKSGRMKEACSLFDEM--V 357
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
G R I +M+ G K+G + A +F +M GCK V + ++ L S+ +
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL--SKIGR 415
Query: 168 AIQAFLMEVPEKFHIQF-DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
AF + H F D ++ ++ FC++G LD+A ++ E+ K P++ Y++
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 227 LISAFYKDNRPEIGNGLWNLM-----VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
L++ E L +L + P L I L R +A ++
Sbjct: 476 LVNGLCDGGSVE--KTLDDLFEQSKAAAETLDPGLCC--SIIVGLCKTGRLDEACRIFQR 531
Query: 282 MQRFGIEPDEVTYNLVIKGFCRS--GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M G +PD TYN++I G CRS ++ A + + +P+ Y + LC+
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQL 399
G+ + A M +++ + W V +AL GL Q +A ++L Q V +
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA---VSLFQEMVRQGGAPDA 648
Query: 400 SAFKSILS 407
+A+ I++
Sbjct: 649 AAYCCIIN 656
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 145/371 (39%), Gaps = 84/371 (22%)
Query: 79 NKYAFE-DTVS------RLAGARRFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKA 128
+ Y F+ DTVS L A+R++ +E L + +P ++R + +
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR---FFCRG 329
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
GM++ A+ M +GC + N L
Sbjct: 330 GMVERAIQVLEQMSGHGC-----AANTTL------------------------------- 353
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
NIVI C+ G +D A+ + M G PD I+YTT++ + R E L MV
Sbjct: 354 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 413
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG--- 305
K C PN TFN I L K QA L+ M G E + VTYN ++ GFC G
Sbjct: 414 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 473
Query: 306 -----------------------------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
LD A ++ + ML + PN + ++ +
Sbjct: 474 SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
CQ+G + A + + M+ P++ T + LL+G+ K+ C + + L+ V + S
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD---CNSEEALELLHGLVSNGVS 590
Query: 397 NQLSAFKSILS 407
+ + SI+
Sbjct: 591 PDIVTYSSIIG 601
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A++ FY M CK + L L + L A L E+ +K ++ +
Sbjct: 470 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK-DCAPNVVT 525
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN+++ FC+ G++D+A ++ +M + G P++ITY TL+ KD E L + +V
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T++ I L + R +A K+ ++Q G+ P V YN ++ C+ + D
Sbjct: 586 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 645
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
A ++ M+ MPN Y T+I L E DF
Sbjct: 646 GAIDFFAYMVSNGCMPNELTYITLIEGLANE-DF 678
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 50/349 (14%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
+A+ V+ + D L+ P I+R + G+ G A+ D
Sbjct: 145 FAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG---EALSLLDD 201
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M GC+ +V + L+ + +S L E+ K +I ++N++I C G
Sbjct: 202 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREG 260
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF- 259
+D A + + G +PD ++YTT++ R E L+ M+ K C PN TF
Sbjct: 261 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320
Query: 260 ----------------------------------NVRIQHLVNKRRSWQANKLMGLMQRF 285
N+ I + + R A + + M +
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G PD ++Y V+KG CR+ + AK++ M+ + PN + T I LCQ+G A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQ-----------PCKANTI 383
++ + + ++ T +AL+ G + PCK NTI
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 489
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+Y C + +++L + +R L+A E+ D+F++N ++ +C G L
Sbjct: 109 VYLCTKLIRNLCRRGRTSDAARVLRA--------AERSGTAVDVFAYNTLVAGYCRYGQL 160
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A ++ M V PD TYT +I R L + M+ +GC P++ T+ V
Sbjct: 161 DAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVL 217
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ + QA +++ M+ G P+ VTYN++I G CR G +D A++ + +
Sbjct: 218 LEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 277
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
P+ Y T++ LC + + + M+KN +P+ T L+
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A +M YGC S LK L + + + L E+ K + +
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCPPNE 421
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN I C+ G++++A +++ +M + G + +++TY L++ F R + L+
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS 481
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M CK PN T+ + L N R A +L+ M + P+ VT+N+++ FC+ G
Sbjct: 482 MPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ M+ PN Y T++ + ++ + A + + P + T S+
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
++ L + ++ +A + +VQ
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQ 620
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G P++ I++L + R+ A +++ +R G D YN ++ G+CR G LD
Sbjct: 103 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 162
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+++ ++M + P+ Y +I LC G A + D + + PSV T + LLE
Sbjct: 163 ARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 219
Query: 370 GLKKNN 375
+ K+
Sbjct: 220 AVCKST 225
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 38/192 (19%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++ +I+ C G A V+ ++ G DV Y TL++ +
Sbjct: 108 DVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY------------- 154
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
R L RR L+ + PD TY +I+G C
Sbjct: 155 ----------------CRYGQLDAARR---------LIASMPVAPDAYTYTPIIRGLCDR 189
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + ML R P+ Y ++ +C+ F A + + K P++ T
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 249
Query: 365 SALLEGLKKNNQ 376
+ ++ G+ + +
Sbjct: 250 NVIINGMCREGR 261
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + G A M++ A+ FY + C+ ++ N+ + +L + + E+ +
Sbjct: 1155 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 1214
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H D +++ +I AFC++G D A ++ EM+++G++P YT LI+ F+K N
Sbjct: 1215 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M + C P++ T+ I+ L R +A MQR G PD V N +I
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-P 359
++G LD A K++ M R +P+ Y T+I L + + MK++ + P
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394
Query: 360 SVDTISALLEGLKKNNQPCKA 380
S T S L++G K N+ KA
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKA 1415
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 12/310 (3%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG------FIMRIMMLYGKAGMIKHA 134
+ + + + L A R D H + REG F+ ++ GKAG + A
Sbjct: 1291 FTYTELIRGLGKAGRIDEAYHFFCEMQ------REGCRPDTVFMNNMINFLGKAGRLDDA 1344
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
M F +M C +V + N +K L ES+ + E ++ I F+++I+I
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
FC+ ++KA +++ EM + G P Y +LI A K R ++ L+ +
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 1464
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+ + V I+HL R A + M + G PD YN ++ G R+G LD A
Sbjct: 1465 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 1524
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
M +P+ Y +++ L + G + A M + + P V + + +L L
Sbjct: 1525 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 1584
Query: 375 NQPCKANTIM 384
+A+ +M
Sbjct: 1585 GMFEEASKLM 1594
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 124/304 (40%), Gaps = 37/304 (12%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + K G A+ +M G + T K + + + D + E+ ++
Sbjct: 1226 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+F++ +I+ + G +D+AY EMQ+ G +PD + +I+ K R +
Sbjct: 1286 -CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 1344
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L+ M C P++ T+N I+ L +K R+ + M+ GI P TY+++I
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMP----------------------------------- 324
GFC++ ++ A + M + P
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 1464
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ ++Y MI +L + G + A M + K P V +AL+ GL + +A + M
Sbjct: 1465 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 1524
Query: 385 ALVQ 388
+Q
Sbjct: 1525 RRMQ 1528
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 38/226 (16%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFYD 140
A+ + L A+R+D L + K G + +M+ + GKAG + A++ F +
Sbjct: 1433 AYCSLIDALGKAKRYDLACELFQELKEN-CGSSSARVYAVMIKHLGKAGRLDDAINMFDE 1491
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M+ GC V + NA + L + L + + + E I DI S+NI++ + G
Sbjct: 1492 MNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP-DINSYNIILNGLAKTG 1550
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+A ++ M++ V+PDV++Y T++ A G F
Sbjct: 1551 GPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSH----------------AGMFE------ 1588
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+A+KLM M G E D +TY+ +++ + H
Sbjct: 1589 -------------EASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 1621
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMA 310
C P +N I L+++ + + ++L M G PD VTY+ +I FC+ G D A
Sbjct: 1180 CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSA 1239
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + M + P KIY +I + D + A + ++ + P V T + L+ G
Sbjct: 1240 IQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRG 1299
Query: 371 LKKNNQPCKANTIMALVQR 389
L K + +A +QR
Sbjct: 1300 LGKAGRIDEAYHFFCEMQR 1318
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ LD A + EM G+ P+ +++TTLI KD
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + +M +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +FC+ G + A V + K G++P V+++ TL++ + K G L N
Sbjct: 136 LYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ V++ +I G C+ G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC+ GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L ++ DLK Q + E+ K ++ D
Sbjct: 253 KDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KLM MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 136/261 (52%), Gaps = 2/261 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ +Y + G+ K+A+ F +M G +++S N+ L L ++ + ++ + +
Sbjct: 128 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH-YVYQQMIRV 186
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+F +I++ AFC+ G +D+A + +M+ LGV+P+++TY +LI+ + E
Sbjct: 187 GIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAA 246
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYNLVIK 299
G+ M KG N+ T+ + I+ + + +A K++ G+ + + PDE Y ++I
Sbjct: 247 KGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLID 306
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G+CR+G +D A ++ ML L N I ++I+ C+ G+ + A + + N P
Sbjct: 307 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 366
Query: 360 SVDTISALLEGLKKNNQPCKA 380
+ + LL+G + +A
Sbjct: 367 DSYSYNTLLDGYCREGHTSEA 387
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 147/314 (46%), Gaps = 18/314 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMIK 132
R +++ F +S L + E + + K L +G R ++ Y KA +
Sbjct: 467 RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP-DGITYRTLIDGYCKASNVG 525
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A M +++ N+ + L +SR L + L E+ + + +I ++ +
Sbjct: 526 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGAL 584
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +C+ G+LDKA+ EM + G+ ++I +T++S Y+ R + N L MV G
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644
Query: 253 FPNLATF---NVR---IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
FP+ F ++R IQ + + L+ P+ + YN+ I G C++G
Sbjct: 645 FPDHECFLKSDIRYAAIQKIADSLDESCKTFLL---------PNNIVYNIAIAGLCKTGK 695
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A++ +S + + +P+ Y T+IH G+ + A+ + + +++ VP++ T +A
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755
Query: 367 LLEGLKKNNQPCKA 380
L+ GL K+ +A
Sbjct: 756 LINGLCKSENVDRA 769
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + ++N ++K C +G D A + M K GV PD + Y+TL+ +K E +
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW ++ +G + TFN I L + +A ++ M+ G PD +TY +I G+
Sbjct: 459 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ ++ A KV AM + P+ ++Y ++I L + + + + P++
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 578
Query: 362 DTISALLEGLKKNNQPCKA 380
T AL++G K KA
Sbjct: 579 VTYGALIDGWCKEGMLDKA 597
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G ++ A M G R V + +K + + + L + E+ +
Sbjct: 237 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 296
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ ++I +C G +D A ++ EM +LG+K ++ +LI+ + K G+
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV P+ ++N + + + +A L M + GIEP +TYN ++KG CR
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D A +++ M+ R + P+ Y T++ L + +F A + KD + + + S T
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476
Query: 365 SALLEGLKKNNQPCKANTI 383
+ ++ GL K + +A I
Sbjct: 477 NTMISGLCKMGKMVEAEEI 495
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 133/283 (46%), Gaps = 6/283 (2%)
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
E +P R G ++ Y + G I A+ +M G K + N+ + +
Sbjct: 290 EEAALVPDERAYGVLID---GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 346
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
++ + + + + ++++ D +S+N ++ +C G +A+ + +M + G++P V+T
Sbjct: 347 GEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLT 405
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y TL+ + + +W+LM+ +G P+ ++ + L A+ L +
Sbjct: 406 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 465
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G +T+N +I G C+ G + A++++ M P+ Y+T+I C+ +
Sbjct: 466 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 525
Query: 344 LAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTIMA 385
A+ + K +M++ + PS++ ++L+ GL K+ + + ++
Sbjct: 526 QAFKV-KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S N ++ + G A+ V +M ++G+ PDV + +++AF KD + + G M
Sbjct: 159 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKM 218
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G PN+ T++ I V+ A ++ M G+ + VTY L+IKG+C+ +
Sbjct: 219 ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKM 278
Query: 308 DMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
D A+KV M L+P+ + Y +I C+ G + A + + ++ ++ ++
Sbjct: 279 DEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNS 338
Query: 367 LLEGLKKNNQPCKANTIMA 385
L+ G K + +A ++
Sbjct: 339 LINGYCKRGEIHEAEGVIT 357
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+NI I C+ G +D A + G PD TY TLI + + L + M+
Sbjct: 683 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G PN+ T+N I L +A +L + + G+ P+ VTYN +I G+C+ G++D
Sbjct: 743 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 802
Query: 309 MAKKVYSAMLGRRLMPN 325
A K+ M+ + P+
Sbjct: 803 AAFKLKDKMIEEGISPS 819
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F++++K + E G+ A V M K G P + + +L++ K+ + ++ M+
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ ++ + + +A + M+ G+EP+ VTY+ +I G+ G ++
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
AK V M + + N Y +I C++
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 275
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+L + N + +LV + A+ + M R GI PD ++++ FC+ G +D A
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
M + PN Y ++I+ GD A + K +K +V T + L++G
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271
Query: 371 LKKNNQPCKANTIMALVQRR 390
K + +A ++ +Q
Sbjct: 272 YCKQCKMDEAEKVLRGMQEE 291
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 51/298 (17%)
Query: 118 IMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
++ + ML G K G IK A D F M + G V S L + A + L+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIML-------NGYATKGCLV 376
Query: 175 EVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ + F + DI++FN++IKA+ G+LDKA ++ EM+ GVKPDV+TY T+I
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFP---------------------------------- 254
+A + + + +N M+ +G P
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 255 -NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ F+ I +L R A + L G+ P V Y++++ G+C G ++ A +V
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ AM+ + PN +Y T+++ C+ G + + ++ ++K PS + +++GL
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 4/281 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + ++ + L ++R + +AFL ++ K + +
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK-GVLPNN 289
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+T + L+ + K + + +++
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PN+ ++ + + K L LM GI PD T+N++IK + G
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + P+ Y+T+I LC+ G + A + + P
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L++G + KA +++ + H + F SI++
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHL---DIVFFSSIIN 507
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + ++++ + C+ G + +A V M G P+V +YT +++ + L+
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF 382
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM+ G P++ TFNV I+ N +A + M+ G++PD VTY VI CR
Sbjct: 383 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A + ++ M+ + + P++ Y +I C G A + + M +
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
S+++ L K + A I L
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLT 525
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 154 NAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N LK E+ R +A+ L PE + D+FS++I++K+ C+ G +A ++ M
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVP-DVFSYSILLKSLCDQGKSGQADDLLRMM 208
Query: 213 QKLGV--KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+ G PDV+ Y+T+I F+K+ L+ MV +G P+ T++ + L R
Sbjct: 209 AEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+A + M G+ P+ TYN +I G+ +G A +V+ M ++P+
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ LC+ G A + K P+V + + +L G
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNG 368
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKR---TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
Y GM+ AM F +M +G K T +++ AAL + + D A++ F + +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD--AMEKFNQMIDQG-- 459
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D ++++ +I+ FC G L KA ++ E+ G+ D++ ++++I+ K R
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++L V G P +++ + + +A ++ M GIEP++V Y ++ G+
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G +D ++ ML + + P+ +Y +I L + G A + + + +
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Query: 362 DTISALLEGLKKN 374
T + +L GL KN
Sbjct: 640 CTYNIVLRGLFKN 652
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ +I N ++K FCE D+A +++ +LG PDV +Y+ L+ + +
Sbjct: 142 LRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 241 NGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L +M G C P++ ++ I + +A L M + GI PD VTY+ V+
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ +D A+ M+ + ++PN Y +I+ G + A + K+ + + +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321
Query: 359 PSVDTISALLEGLKK 373
P V T+S L+ L K
Sbjct: 322 PDVVTLSMLMGSLCK 336
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI-QFDIFSFNIVIKAFCEMGILD 203
GC V S + LK L + L + E + D+ +++ VI F + G ++
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD +TY++++ A K + MV KG PN T+N I
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD VT ++++ C+ G + A+ V+ M +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 324 PNRKIYQTMIHYLCQEG 340
PN Y M++ +G
Sbjct: 357 PNVFSYTIMLNGYATKG 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRP-EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
++ + G++ ++I L+ F + R E + L + GC P++ ++++ ++ L ++
Sbjct: 136 QLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQ 195
Query: 270 RRSWQANKLMGLMQRFG--IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+S QA+ L+ +M G PD V Y+ VI GF + G ++ A ++ M+ R + P+
Sbjct: 196 GKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV 255
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y +++H LC+ + A + + K +P+ T + L+ G Q
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+++++ +C +G ++KA V M G++P+ + Y TL++ + K R + G L+ M+
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P+ +N+ I L R+ A M GI ++ TYN+V++G ++ D
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD 656
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ + + N TMI + Q A + + VP V T S ++
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQ 398
L K LV+ FSS Q
Sbjct: 717 TNLIKE----------GLVEEAEDMFSSMQ 736
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ +C++G +D+ + EM + G+KP I Y +I ++ R ++ M
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G N T+N+ ++ L R +A L ++ ++ + +T N +I G ++ ++
Sbjct: 632 ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVE 691
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AK +++++ L+P Y MI L +EG A M P ++ ++
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
L K N+ +A ++ + R +FS L+
Sbjct: 752 RELLKKNEIVRAGAYLSKIDER--NFSLEHLTT 782
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I + F +M G K + N + L E+ + E+ E I
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAM 637
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++NIV++ + D+A + E++ + VK ++IT T+I+ ++ R E L+
Sbjct: 638 NKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ G P + T+++ I +L+ + +A + MQ G EPD N V++
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 752
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 90/208 (43%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ DI F+ +I C++G + A + +G+ P + Y+ L+ + + E
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++ MV G PN + + R + L M + GI+P + YN++I G
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+G AK + M + N+ Y ++ L + F+ A + K+ N ++
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 674
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T++ ++ G+ + + +A + A + R
Sbjct: 675 ITLNTMIAGMFQTRRVEEAKDLFASISR 702
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA- 275
+ P TY L+ + +RPE+ + ++ G N+ N ++ +R+ +A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML--GRRLMPNRKIYQTMI 333
+ L+ G PD +Y++++K C G A + M G P+ Y T+I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+EGD N A + K+ +++ P T S+++ L K KA +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK ++F A I N + V+ R D E L ++ L +G + I+
Sbjct: 551 EKALRVFDAMVSAGIE-PNDVVYGTLVNGYCKIGRID--EGLSLFREMLQKGIKPSTILY 607
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
+++ G +AG A F++M G + N L+ L ++R FL +
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDE-AIFLFKELR 666
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+++ +I + N +I + +++A + + + G+ P V+TY+ +I+ K+ E
Sbjct: 667 AMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M GC P+ N ++ L+ K +A + + + +T L++
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Query: 299 -----KGFCR 303
KG CR
Sbjct: 787 DLFSSKGTCR 796
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 167 KAIQAFLMEVPEKFHIQF---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
KA+ M + +K Q+ + ++ +I A C++G +D A L +M GV PD+
Sbjct: 355 KAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFV 414
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+++L+ ++ E L+ ++ +G N A FN+ + +L + R +A +L+ LM
Sbjct: 415 FSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLML 474
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
R + PD ++YN ++ G C +G +D A K+ M+ L P+ Y T++H C+ +
Sbjct: 475 RVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRID 534
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
AY + ++ + K P V T + +L GL + + C+A +
Sbjct: 535 DAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKEL 574
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 3/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQ 183
Y K MI AM F M V + A + L + R A+ F + E +
Sbjct: 352 YAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEG--VT 409
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DIF F+ ++ C + +KA + E+ G++ + + L+ ++ R L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+LM+ P++ ++N + R +A KL+ +M G++PDE TYN ++ G+C+
Sbjct: 470 IDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCK 529
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ +D A ++ ML + L P Y T++H L Q G F A + + + + T
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYT 589
Query: 364 ISALLEGLKKNN 375
+ +L GL +NN
Sbjct: 590 YTIILNGLCRNN 601
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA----IQAFLMEVPE-KFHIQFD 185
+ A+ F +M Y +V++ N L V++ +R A + F + E +
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAFYKDNR-PEIGNGL 243
++ I+I FC MG L + + K G + + + L+ R E + L
Sbjct: 92 SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI---EPDEVTYNLVIKG 300
M GC N+ ++N+ ++ L N++R+ +A +LM +M G P+ VTY VI G
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++ +D AK V+ M+ + + PN Y +IH G + M ++ P
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271
Query: 361 VDTISALLEGLKKNNQPCKANTIM-ALVQRRV-PHFS 395
+ LL+ L KN + +A I +L+++ + PH +
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVT 308
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 157 LKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
LK L +++ + +A L +PE F ++ S+NI++K C ++A +M M
Sbjct: 135 LKGLCDAKRVDEATDILLRRMPE-FGCTLNVISYNILLKGLCNEKRAEEALELMHMMADD 193
Query: 216 GV---KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
G P+V+TYTT+I K + G++ M+ KG PN T+ I ++ +
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKW 253
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ +++ M G++PD V Y +++ C++G A+ ++ +++ + + P+ IY +
Sbjct: 254 KEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGIL 313
Query: 333 IHYLCQEG 340
+H EG
Sbjct: 314 LHGYATEG 321
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + FNI++ C G + +A ++ M ++ V+PDVI+Y TL+ R +
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L ++MV G P+ T+N + RR A L M G+ P VTYN ++ G
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+ G AK++Y M+ R + Y +++ LC+ + A+ M + K+ +
Sbjct: 563 FQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDI 622
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR--VPHFSSNQLSA 401
TI+ ++ L K + A + A + VP + +L A
Sbjct: 623 FTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIA 664
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A L++V ++ D F++N ++ +C+ +D AY + EM G+ P V+TY T++
Sbjct: 502 AKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561
Query: 231 FYK---------------DNRPE--------IGNGL------------WNLMVCKGCFPN 255
++ +NR + I NGL + + K +
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLD 621
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T N+ I L+ R A L + +G+ PD TY L+ + + G L+ +++S
Sbjct: 622 IFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFS 681
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AM PN ++ ++ +L GD A + +KN+ T S L+
Sbjct: 682 AMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 82/184 (44%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I + G + ++ EM G++PD + Y L+ K+ R +++ +
Sbjct: 239 TYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSL 298
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ KG P++ + + + + + + + LM R G+ PD +N++ + + +
Sbjct: 299 IRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMI 358
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A ++ M + L P Y +I LC+ G + A + + + P + S+L
Sbjct: 359 DEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSL 418
Query: 368 LEGL 371
+ GL
Sbjct: 419 VYGL 422
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 1/211 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA M+ A F M G + + + + K + L E+ +Q D
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTH-GLQPDC 272
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +++ C+ G +A + + + G+KP V Y L+ + + + +L
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDL 332
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P+ FN+ K +A + M++ + P V Y +I C+ G
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+D A ++ M+ + P+ ++ ++++ LC
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQ 183
Y KA I A F +M + G V + N L L + R +A + +L + + +
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR--K 584
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI+++ I++ C +D+A+ + + ++ D+ T +I A K R E L
Sbjct: 585 CDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDL 644
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ + G P++ T+ + ++L+ + + ++L M+ G P+ N +++
Sbjct: 645 FATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704
Query: 304 SGHLDMA 310
G + A
Sbjct: 705 RGDIGRA 711
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q DIF+ NI+I A + G + A + + G+ PDV TY + K+ E +
Sbjct: 618 LQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELD 677
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M G PN N ++ L+++ +A + + + T +++I +
Sbjct: 678 ELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIY 737
Query: 302 CRSGHLDMAKKV 313
R+ + +AK +
Sbjct: 738 SRAEYQQLAKSL 749
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 7/254 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I AM +FY M + + L L + + + + + ++ + F + + ++ N
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLN 125
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I + C + + A V+ +M KLG++PD +T+TTLI+ + R + L+N M +
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
PN TF + + L K +A + M G+EP+ TYN ++ G+C ++ A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
KV+ M+G+ P+ Y +I+ C+ + A + +K +P+ T + L++G
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 371 LKKNNQPCKANTIM 384
L C A++++
Sbjct: 306 L------CHASSLL 313
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 138/282 (48%), Gaps = 8/282 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFD 185
K GM+ A F M G + + + NA + ++ A + F + V +
Sbjct: 203 KKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG--CAPS 260
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S++I+I +C+ +D+A ++ +M + + P+ +TY TL+ + L+
Sbjct: 261 VHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK 320
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PNL T+++ + L +A KL+ MQ +EPD V YN++I+G +G
Sbjct: 321 KMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAG 380
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L++AK+++S + + P+ + Y MI L +EG + AY + + ++P + +
Sbjct: 381 KLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYN 440
Query: 366 ALLEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSIL 406
+++G +N P A I +V RR FS++ S FK +L
Sbjct: 441 VIIQGFLQNQDPSTAIQLIDEMVGRR---FSADS-STFKMLL 478
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 7/248 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G IK A++ F +M + + VL + + + + EK ++ +I++
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEK-GVEPNIYT 228
Query: 189 FNIVIKAFC---EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+N ++ +C EM K + +MV G P V +Y+ LI+ + K R + L
Sbjct: 229 YNALMNGYCLRLEMNDASKVFEIMVGK---GCAPSVHSYSILINGYCKSRRIDEAKALLT 285
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M K PN T+N +Q L + +A +L M G+ P+ TY++++ G C+ G
Sbjct: 286 QMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHG 345
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
HL+ A K+ ++M R+L P+ +Y +I + G +A + PSV T +
Sbjct: 346 HLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYN 405
Query: 366 ALLEGLKK 373
+++GL K
Sbjct: 406 IMIKGLLK 413
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC +V S + + +SR + +A L ++ EK I + ++N +++ C L +
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIP-NTVTYNTLMQGLCHASSLLE 314
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + +M G+ P++ TY+ L+ K E L M + P++ +N+ IQ
Sbjct: 315 AQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQ 374
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + A +L + GI P TYN++IKG + G D A K++ M +P
Sbjct: 375 GMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLP 434
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ Y +I Q D + A + + + + + T LL+
Sbjct: 435 DSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 5/256 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K G I A D M + G + V + NA + L D +A++ F V +
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD-EAVKVFDTMVHNGY--AP 345
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + P+ +TY TL+ R + L+
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV G P+LAT+ + + +L K +A L+ ++ ++PD Y +VI G CR+
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN + Y MI+ LC+ G + A + + P T
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525
Query: 365 SALLEGLKKNNQPCKA 380
+ + +GL +N + +A
Sbjct: 526 NTITQGLLQNKEALRA 541
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 111/215 (51%), Gaps = 4/215 (1%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I D+++ NI+I +FC + A+ V+ ++ KLG++PD T+TTLI + +
Sbjct: 94 DSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK- 152
Query: 238 EIGNG--LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
IG+ L++ M+ +G PN+ T+ I L + A +L+ M++ +PD V Y
Sbjct: 153 -IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I C+ + A ++S M+G+ + P+ Y ++IH LC ++ + +
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+P V S +++ L K + +A+ ++ ++ R
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 306
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G A+ M C+ V + + L + R + +A F V + I D
Sbjct: 184 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG--ISPD 241
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF++ +I + C + ++ +M + PDV+ ++T++ A K+ + + + +
Sbjct: 242 IFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVD 301
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M+ +G PN+ T+N + + +A K+ M G P+ ++YN +I G+C+
Sbjct: 302 MMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQ 361
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A ++ M + L+PN Y T++H LC G A + + + +P + T
Sbjct: 362 RMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYR 421
Query: 366 ALLEGLKKNNQPCKANTIMALVQ 388
LL+ L K + +A ++ ++
Sbjct: 422 ILLDYLCKKSHLDEAMALLKTIE 444
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+ E+ + Q D+ + +I + C+ + +A+ + +M G+ PD+ TYT+LI +
Sbjct: 194 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 253
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ L N M+ P++ F+ + L + + +A+ ++ +M G+EP+ V
Sbjct: 254 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 313
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN ++ G C +D A KV+ M+ PN Y T+I+ C+ + A + ++
Sbjct: 314 TYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 373
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+K +P+ T + L+ GL + A +AL V H L+ ++ +L
Sbjct: 374 CQKELIPNTVTYNTLMHGLCHVGRLQDA---IALFHEMVAHGQIPDLATYRILL 424
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ F+ V+ A C+ G + +A+ V+ M GV+P+V+TY L+ + + ++
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV G PN+ ++N I +R +A L M + + P+ VTYN ++ G C
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A ++ M+ +P+ Y+ ++ YLC++ + A + K N P +
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455
Query: 365 SALLEGLKKNNQPCKANTIMA 385
+ +++G+ C+A + A
Sbjct: 456 TIVIDGM------CRAGELEA 470
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q D +F +I+ C G + A + +M G +P+V+TY TLI+ K
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M C P++ + I L R+ +A L M GI PD TY +I
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C + + M+ ++MP+ I+ T++ LC+EG A+ + + +
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309
Query: 359 PSVDTISALLEG 370
P+V T +AL++G
Sbjct: 310 PNVVTYNALMDG 321
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A M + P + + L+++ K + L N M G P++ T N+
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + R A ++ + + G++PD T+ +I+G C G + A ++ M+G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
PN Y T+I+ LC+ G+ N A + + + N P V +++++ L K+ Q +A
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 10/252 (3%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH--QKSL-P 110
L++E D + ++F HN N ++ ++ +R D +L E QK L P
Sbjct: 324 LQSEMD--EAVKVFDTMVHNGYA-PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 380
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
+M + G+ ++ A+ F++M +G + + L L + L
Sbjct: 381 NTVTYNTLMHGLCHVGR---LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A L + E ++ DI + IVI C G L+ A + + G++P+V TYT +I+
Sbjct: 438 ALLKTI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING 496
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ + N L+ M GC P+ T+N Q L+ + + +A +L+ M G D
Sbjct: 497 LCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSAD 556
Query: 291 EVTYNLVIKGFC 302
T L+++ C
Sbjct: 557 VSTTTLLVEMLC 568
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ LD+A ++ ++ + PD+ YT +I + E ++
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+ + I L + +ANKL M G PD TYN + +G ++
Sbjct: 476 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A ++ ML R + ++ LC +
Sbjct: 536 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 570
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 45/95 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I+I C G+LD+A + +EM G PD TY T+ ++ L
Sbjct: 486 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 545
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
M+ +G +++T + ++ L + + +++
Sbjct: 546 QEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK +C+ G A ++ M+ G KPD +YT LI F K ++ E GL+
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G PN T+ I + A L+ M+R G P+ TYN++I G +
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+++ M+ + PN Y MI LC+ G +LA M +++ +P++ T
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
S+L+ L + + +A + A ++R
Sbjct: 809 SSLIRALGQEGKVEEAENLFAELER 833
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S+ +I FC++ ++ A+ + EM G+ P+ +TYT LI + KD + + L
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC PN+ T+NV I L + A +L +M GI P+ VTY +I G C++
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +A ++++ M+ + +PN Y ++I L QEG A + + + +P T
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843
Query: 365 SALLE 369
++E
Sbjct: 844 VKMIE 848
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 79/153 (51%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I A C+MG + A+ + V+M+ G +P+V TYT LIS ++ GL++ M G
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 556
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FPN T+N I LV RR A ++ LM R G+ + VTYN +IKG+C G A
Sbjct: 557 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAML 616
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
V + ML R N Y T+I C G+ A
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F DM GC+ V + A + L S LK + L + + + +
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK-VAIGLFHRMSRDGVFPNTVT 562
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I E + A++V+ M + G+ +++TY +I + P+ + N M+
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G NL T+N I+ + + A +++ LM+ G +PDE +Y +I GFC+ ++
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M+ L PN Y +I C++ + A + + + P+V T + L+
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742
Query: 369 EGLKKNN 375
GL K N
Sbjct: 743 HGLTKQN 749
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 9/299 (3%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYG 145
S+ A AR +++ L + G R G +L + GM MD ++ M G
Sbjct: 327 SKEAMARTMSFLDMLSQ------SGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ + NA + L + ++ + + +V E + D F++ +I C LD A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFES-EMSPDTFTYTSMILGHCRKHDLDSA 439
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V +M K G +P+ +TY+TLI+ R L M+ G P T I
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A +L M+ G EP+ TY +I G C SG L +A ++ M + PN
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I+ L + A+++ + ++ T + +++G P KA +M
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I +C+ LD A ++ M++ G +P+V TY LI K N L +M
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G FPN+ T+ I L + A ++ M G P+ +TY+ +I+ + G +
Sbjct: 762 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 821
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A+ +++ + L+P+ Y MI G A+ +K P++ T L
Sbjct: 822 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 881
Query: 368 LEGLKKNNQPCKANTIMALVQRRVPHFS 395
++GLK N+ A+ +A + VP+ S
Sbjct: 882 IKGLK--NEYLLADQRLAALPDVVPNCS 907
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E ++ + ++ ++N++I + A + M + G+ P+V+TYT +I
Sbjct: 722 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 781
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + ++N M+ +GC PNL T++ I+ L + + +A L ++R G+ PDE+
Sbjct: 782 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 841
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TY +I+ + SG ++ A M+ P Y +I L E
Sbjct: 842 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ +N VI A C+ G + A +M ++ + + PD TYT++I + + +
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M +GC PN T++ I L + R +A L+ M GI P T I
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G + A +++ M + PN Y +I LC G +A + + P+
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T +AL+ L +N + A ++ L+ R
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGR 588
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A++ F M GC + + ++ ++ L + ++ + E+ E+ + D
Sbjct: 782 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDE 840
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS-------------AFYK 233
++ +I+A+ G ++ A+ + M K G +P + TY LI A
Sbjct: 841 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALP 900
Query: 234 DNRPEIGNGLW-------NLMVCK--GCFPNLATF--NVRIQHLVNKRRSWQANKLMGLM 282
D P G ++M K P L+ N + +L R ++AN+L+G M
Sbjct: 901 DVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 960
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G+ PD+ YN ++ R ++D+A V+ M + + Y+ +I LCQ
Sbjct: 961 ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRR 1020
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
A I ++ + + W P + L++GL ++
Sbjct: 1021 KEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 92/241 (38%), Gaps = 31/241 (12%)
Query: 119 MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL------------------ 160
++++ Y +G ++HA + M GC+ T+ + +K L
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 903
Query: 161 ---------TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
T+ + + A L E+ +Q N ++ G +A ++
Sbjct: 904 PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ----NALVSNLSTAGRWFEANELLGS 959
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G+ PD Y +L+ + + ++ G++ M +GC +L + I L R
Sbjct: 960 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 1019
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A M PD+V ++I G R G+ D+ + M RR MP+ IY
Sbjct: 1020 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTI 1079
Query: 332 M 332
+
Sbjct: 1080 L 1080
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G++P+ + YN VI C+ G++ A+ + + + P+ Y +MI C++ D + A
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ K+ P+ T S L+ GL + + N L++ + H
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSG---RVNEAFDLIREMILH 484
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F +M C+ + L+ L S L+ + L + E + D +N +I
Sbjct: 26 ASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAI-YNALI 84
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ + +A+ + EM K P V+TYT ++ K R L + M KGC
Sbjct: 85 SGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ T+NV ++ L +R+ +A K++ M G PD VTYN IKG C+ +D A+K
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M + P+ Y T+I+ LC+ GD + A M + P V T S+L++G K
Sbjct: 205 LARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261
Query: 374 NNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+ +A M L+ + + A+ S+L
Sbjct: 262 GGEVERA---MGLLDSMLKLGCRPNMVAYNSLLG 292
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ +K L + + + FL +P + D+ S+ VI C+ G LD A ++
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRML 237
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M G PDV+TY++LI F K E GL + M+ GC PN+ +N + L
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK-- 327
+A ++ M+R G PD V+YN I G C++ + AK V+ M+ R PN
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 328 --------IYQTMIHYLCQEGDFNLA 345
+Y ++ LC+ G F+ A
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEA 383
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 6/274 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA A +M C TV + + L ++ + L E+ +K
Sbjct: 87 YSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDK-GCSP 145
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I+++N++++ CE LD+A ++ EM G PDV+TY + I K +R +
Sbjct: 146 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL 205
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M P++ ++ I L A++++ M G PD VTY+ +I GFC+
Sbjct: 206 ARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A + +ML PN Y +++ L + G A M + ++ + P V +
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPHFSS 396
+A ++GL K + KA + + R P+ SS
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 147/332 (44%), Gaps = 19/332 (5%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKH 133
V + ++ ++ L + D +L+H + +G + ++ G K G ++
Sbjct: 210 VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN--RGCTPDVVTYSSLIDGFCKGGEVER 267
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM M GC+ + + N+ L L + + L+E+ E+ D+ S+N I
Sbjct: 268 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM-ERRGFTPDVVSYNACI 326
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKP----------DVITYTTLISAFYKDNRPEIGNGL 243
C+ + KA V M + G P D++ YT L+ K R + L
Sbjct: 327 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACAL 386
Query: 244 WN-LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++ ++ K C P++ +NV + +R+ +A ++ M + VT+N+++ G C
Sbjct: 387 FSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLC 445
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
L A+ + M+ +P+ Y T++ +C+ G A + ++++K VP V
Sbjct: 446 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 505
Query: 363 TISALLEGLKKNNQPCKANTIMA-LVQRR-VP 392
T SAL+ GL N +A + LV+RR VP
Sbjct: 506 TYSALITGLVHENMAEEAYLLFTKLVERRWVP 537
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++F++N ++ DKA V EM +PD T+ L+ + N+ E
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M GC P+ A +N I + QA K + M + P VTY ++ G C
Sbjct: 64 LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++ A K+ M + PN Y ++ LC+E + A M ++ + + P V
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183
Query: 363 TISALLEGLKKNNQPCKANTIMA 385
T ++ ++GL K ++ +A +A
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLA 206
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 13/268 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK------- 179
+ G I A D +M G V S NA + L ++ +K +A + E+
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355
Query: 180 --FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM--QKLGVKPDVITYTTLISAFYKDN 235
+ DI + +++ C+ G D+A + ++ +K+ +PDV Y ++ + K
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI-CEPDVFFYNVMLDSHCKRR 414
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ + + M+ K C N+ T+N+ + L R A ++ M G PD VTY
Sbjct: 415 QIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 473
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
++ C+ G A +++ + +P+ Y +I L E AY++ +++
Sbjct: 474 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTI 383
WVP T+ L LK N+P KA +
Sbjct: 534 RWVPDDKTLGLLHRKLKLLNKPRKAEVV 561
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%)
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
+G + +V TY L+ +++R + + ++ M+ K C P+ TF + ++ L + +
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
A KL+G M+ G PD+ YN +I G+ ++ A K + M+ +P Y ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ A + + K P++ T + ++EGL
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGL 157
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 XMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ GHL+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K G++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 XMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + VJ+ ++ + E + G + + L
Sbjct: 85 AIECYRLTKEHKFRVPFD--TCRKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ +F K+ + +++ + G P++ +FN + + + +L MQ G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGV 202
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML L+PN + T+I C+ G +LA
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ K + ++ P + T + L+ GL K
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 132 KHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-DIFSF 189
+H + ++ M H + + ++++ + + A + E Q DI+ F
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVF 69
Query: 190 NIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFYKDNRP 237
+ +I A+ E G L A + + K V D + Y L+ FY+++
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEES-- 127
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ C G +L FN+ + V + A + + ++G+ P V++N +
Sbjct: 128 ---------LEC-GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+ + G LD ++ + M + P+ Y +I+ LC+E + A + + +
Sbjct: 178 MNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237
Query: 358 VPSVDTISALLEGLKKNNQ 376
VP+ T + L++G KN +
Sbjct: 238 VPNGVTFTTLIDGHCKNGR 256
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + D+ A L E+ K ++ +IF++N +I C+ G L++A M++M + G+KP
Sbjct: 470 LCKQGDVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
DV TYTT+I A + + + L M+ KG P + T+NV + R +L+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M I P+ TYN ++K +C ++ ++Y ML + ++PN Y +I C+
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ A + ++K + + + +AL+ L K +
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M + + G + A + F +M G + A + L + +LK + L E+ +K
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK- 419
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D ++ ++I +C++G + +A+LV +M + V P+V+TYT L K
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
N L + M KG N+ T+N I L QA + M M G++PD TY +I
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+S LD A + ML + + P Y +++ C G + + ++KN P+
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599
Query: 361 VDTISALLE 369
T ++L++
Sbjct: 600 TTTYNSLMK 608
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ +C + L+ A ++ EM G++ + + YT++I+ + + +
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G + A F + K A MQ+ G+ D VTY +I G CR+
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V M + L + Y +I C+ G A+++ ++K P+V T
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 365 SALLEGLKKNNQPCKANTIM 384
+AL +GL K C AN ++
Sbjct: 464 TALSDGLCKQGDVCAANELL 483
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + ++M G + + + N+ + L ++ +L+ ++++ E ++ D+
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA-GLKPDV 530
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I A C+ LD+A+ ++ EM G+KP ++TY L++ F R E G L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ K PN T+N ++ ++ ++ M + P+E TYN++IKG C++ +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ A +S M+ + Y +I L ++ F A
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 13/249 (5%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
YG + +S NA L L +A+Q F E+PEK + S+NI++KA C G +
Sbjct: 220 YGISPSPESCNAVLCRLPLD---EAVQLF-QELPEK-----NTCSYNILLKALCTAGRIK 270
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A+ + EM PDV+TY ++ + + E L + M +G N + I
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L ++ + A +++ M G+ D + V+ GFCR G L A+ + M R L
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ Y +I+ LC+ G+ A + ++ K T + L++G K + +A +
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLV 447
Query: 384 M-ALVQRRV 391
+VQ+RV
Sbjct: 448 HNKMVQKRV 456
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 38/270 (14%)
Query: 128 AGMIKHAMDTFYDMH------LYG------CKRTVKSLNAALKVLTE--SRDLKAIQAFL 173
AG IK A F +M YG C T+ L A+K+L+E +R L
Sbjct: 266 AGRIKDAHQLFDEMASPPDVVTYGIMVHGYC--TLSELETAIKLLSEMAARGL------- 316
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ VI C+ G + A V+ +M GV D +TT++S F +
Sbjct: 317 ---------ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
++ M +G + T+ I L +A +++ M+ G++ D VT
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++I G+C+ G + A V++ M+ +R+ PN Y + LC++GD A + +
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTI 383
K ++ T ++L+ GL CKA +
Sbjct: 488 SKGLELNIFTYNSLINGL------CKAGNL 511
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-------- 233
+ D F V+ FC G L A EMQK G+ D +TYT LI+ +
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 234 ----------------------DNRPEIGNG-----LWNLMVCKGCFPNLATFNVRIQHL 266
D ++G + N MV K PN+ T+ L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ AN+L+ M G+E + TYN +I G C++G+L+ A + M L P+
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y T+I LCQ + + A+ + ++ + K P++ T + L+ G
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ AM T DM G K V + + L +S++L + L E+ +K I+ I
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTI 565
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ FC G ++ ++ M + + P+ TY +L+ + + + ++
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + PN T+N+ I+ R +A M G +YN +I+ +
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
A++++ M RL +Y I E + +C + ++ V S+
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ ++ +I C++G L A + EM G+KP+V+ YT+LIS + K+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M KG PN TF I L + R +ANKL G M + + P+EVTYN++I+G
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK------- 354
C+ G+ A ++ M+ + L+P+ Y+ +I LC G + A D
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 355 -KNWVPSVDTISALLEGLKK 373
+ +P+V T +AL+ GL K
Sbjct: 601 IEGCLPNVVTYTALINGLCK 620
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + A+ ++ +++K GV P + Y LI++ KD + + L+N M KG FPN T+
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
++ I + + A +G M GI+ Y+ +I G C+ G L AK ++ M+
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
L PN IY ++I C+EG+ + A+ + + K P+ T +AL+ GL N+ +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE 513
Query: 380 ANTIMA 385
AN +
Sbjct: 514 ANKLFG 519
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I C++G++DKA L+ EM P+ TY + + E L
Sbjct: 607 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 666
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++++ +G N T+N+ I+ R +A +++ M GI PD ++Y+ +I +CR
Sbjct: 667 DVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 725
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A K++ +ML R + P+ Y +I+ C G+ A+ + D M++ P+ T
Sbjct: 726 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 785
Query: 365 SALLEG 370
++L+ G
Sbjct: 786 NSLIHG 791
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 8/290 (2%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARR-FD--YIEHLLEHQKSLPQGRRE 115
+PE LF+ F +++ + F+ + RR D + L+ LPQ R
Sbjct: 125 NPEGLFESF-LDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTL 183
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
++ ++ + + A+ F ++ G + V A ++ L E +D + +
Sbjct: 184 SGVLNGLI---RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ E + ++N+ I+ C+ + +A + + G++ DV TY TL+ K
Sbjct: 241 M-ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
E G + N M+ G P+ A + + L K A L+ +++FG+ P YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+I C+ G LD A+ +++ M + L PN Y +I C+ G ++A
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 164 RDLKAIQAF--LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM----VEMQKL-- 215
++ ++AF L E+ EK + D +++ +I C G + +A M E QKL
Sbjct: 542 KEGNTVRAFELLDEMVEKGLVP-DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 216 --GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
G P+V+TYT LI+ K + L M+ PN T+ + +L ++
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A +L ++ G + VTYN++I+GFC+ G + A +V M+ + P+ Y T+I
Sbjct: 661 KAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ C+ GD A + + + + P + L+ G + KA + + RR
Sbjct: 720 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRR 776
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 35/150 (23%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI+I+ FC++G + +A V+V M G+ PD I+Y+T+I + + + LW M
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G + PD V YN +I G C +G L
Sbjct: 739 LNRG-----------------------------------VNPDTVAYNFLIYGCCVTGEL 763
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
A ++ M+ R + PNR Y ++IH C
Sbjct: 764 TKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 211 EMQKLGVKPDVITYTTLISAF--YKD---NRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
E+ G++PDV YT ++ + KD R IG M GC ++AT+NV I+
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGR-----MESSGCDLSVATYNVFIRG 259
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L +R W+A ++ L+ G+ D TY ++ G C+ + +++ + M+ +P+
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPS 319
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ L ++G+ A+ + K PS+ +AL+ + K+ + +A ++
Sbjct: 320 EAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 93/187 (49%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++I+ + + +V+ M G+ P + T + +++ + + + L++
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+V G P++ + ++ L + +A +++G M+ G + TYN+ I+G C++
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ + + + L + Y T++ LC+ +F M + ++ +VPS +S
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 367 LLEGLKK 373
L++GL+K
Sbjct: 326 LVDGLRK 332
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGY-PASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 152
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 153 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 212
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 213 NGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 272
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 273 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 313
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M GV+PDV TY
Sbjct: 138 DIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY 196
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + NGL++ M+ KG PN TF I R A ++ M
Sbjct: 197 SVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 256
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I C+EGD +
Sbjct: 257 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDT 316
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A ++
Sbjct: 317 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKML 356
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 182
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 183 AMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNG 242
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 243 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 302
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 303 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 362
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 363 GLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQR 396
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 240 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 298
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 299 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 358
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + + K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 359 MLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 5/249 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFD 185
+AG I A+ F DM C TV++ + L+ S R ++A+ F E+ EK + +
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF-NEMKEK-GCEPN 333
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ ++I C+ +D+A ++ EM + G+ P V+TY LI + K+ + + +
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
LM C PN T+N I L KR+ +A L+ M + P +TYN +I G C+
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI- 364
L+ A ++ S M L+P++ Y I LC+EG A + DS+K V + + I
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL-FDSVKAKGVKANEVIY 512
Query: 365 SALLEGLKK 373
+AL++G K
Sbjct: 513 TALIDGYCK 521
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 125/258 (48%), Gaps = 1/258 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G A++ F +M GC+ V + + L + + + L E+ EK I +
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP-SVV 370
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I +C+ G++D A+ ++ M+ P+ TY LI K + L N M
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ + P+L T+N I A +L+ LM G+ PD+ TY++ I C+ G +
Sbjct: 431 LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRV 490
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A ++ ++ + + N IY +I C+ G ++AY + + + +P+ T + L
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550
Query: 368 LEGLKKNNQPCKANTIMA 385
+EGL K + +A++++A
Sbjct: 551 IEGLCKEKKMKEASSLVA 568
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
A + FL+ +P+K Q + S+ +I CE G +++A + +M + P V TYT L
Sbjct: 248 AYEVFLI-MPQK-GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I A R L+N M KGC PN+ T+ V I L + + +A K++ M G+
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P VTYN +I G+C+ G +D A ++ M PN + Y +I LC++ + A
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ +++ PS+ T ++L+ G K N A +++L+
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ +A + F M GC+R S + L E+ + ++ E + + ++
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED-NCCPTVRTYT 303
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I A G +A + EM++ G +P+V TYT LI K+N+ + + + M K
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T+N I + A +++ LM+ P+ TYN +I G C+ + A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + ML R+L P+ Y ++IH C+ D AY + + VP T S ++
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 371 LKKNNQPCKANTIMALVQRR 390
L K + +A T+ V+ +
Sbjct: 484 LCKEGRVEEAGTLFDSVKAK 503
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 42/308 (13%)
Query: 104 EHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E +K L + +G I ++ Y K GMI A + M C ++ N +
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
L + R + A L ++ E+ + + ++N +I C++ L+ AY ++ M + G+
Sbjct: 412 CGLCKKRKVHKAMALLNKMLER-KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-------------------------- 251
PD TY+ I K+ R E L++ + KG
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530
Query: 252 ---------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
C PN T+NV I+ L +++ +A+ L+ M G++P VTY ++I
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G D A KV++ M+ P+ Y +H +G + ++ +P +
Sbjct: 591 KDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLV 650
Query: 363 TISALLEG 370
T + L++G
Sbjct: 651 TYTVLIDG 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 41/296 (13%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
K T++ N L L++ + ++ +E+ I +I++FN ++ +C++G + +A
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNN-QISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG--------------- 251
L ++ + G+ PD TYT+LI ++ + ++ +M KG
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 252 --------------------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
C P + T+ V I L R +A L M+ G EP+
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TY ++I G C+ +D A+K+ S M + L+P+ Y +I C+EG + A+ + D
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-D 393
Query: 352 SMKKNWV-PSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
M+ N P+ T + L+ GL K + KA MAL+ + + S L + S++
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKA---MALLNKMLERKLSPSLITYNSLI 446
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N++I+ C+ + +A ++ +M +GVKP V+TYT LI KD + ++N
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P++ T+ + ++ + + ++ M GI PD VTY ++I G+ R G
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A M+ P+ I +I L E
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I +C++G +D AY ++ M P+ TY LI K+ + + + L M+
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P + T+ + I ++ A K+ M G +PD TY + + G L+
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
V + M ++P+ Y +I + G + A+ K + PS+ +S L+
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 369 EGLKKNNQ 376
+ L N+
Sbjct: 692 KNLSHENR 699
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 23/288 (7%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGM 130
N + N Y + + L ++ L+ K L G + + +++ K G
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLV--AKMLTMGVKPTVVTYTILIGEMLKDGA 594
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
HA+ F M G + V + A L L+ + + ++ E+ I D+ ++
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE-GILPDLVTYT 653
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------------- 237
++I + +G+ +A+ + M G KP + + LI +NR
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 238 -----EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
EI L+ MV GC +++ + I + R +A L+ M+ G+ P E
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
YN ++ C+ G A ++ AM+ L+P + Y+ ++ L EG
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 821
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 143/377 (37%), Gaps = 57/377 (15%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D E ++L N +V +++ + + L R + L + K+ E
Sbjct: 454 DLESAYRLLSLMNENGLV-PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 119 MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
++ Y K G I A M C + N ++ L + + +K + + ++
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML- 571
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
++ + ++ I+I + G D A V M LG +PDV TYT + A++ E
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 239 -----------------------IGNGLWNL------------MVCKGCFPNLATFNVRI 263
+ +G L MV GC P+L ++ I
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 264 QHLVNKRRSWQANKLMGL------------------MQRFGIEPDEVTYNLVIKGFCRSG 305
++L ++ R + +G+ M G D Y +I GFC+
Sbjct: 692 KNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 751
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L+ A+ + M R + P+ IY +++ C+ G + A + ++ +P +++
Sbjct: 752 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 811
Query: 366 ALLEGL--KKNNQPCKA 380
L+ GL + +N+ KA
Sbjct: 812 LLVCGLYIEGSNEKAKA 828
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQFDIFSFNIV 192
A+ F M +GC V A + + L+ Q + + E+ DI+ N +
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY--NSL 778
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C++G+ +A ++ M + G+ P + +Y L+ Y + E +++ ++ G
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 838
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + V I L+ + + ++L+ +M+ G +P+ +TY+L+I+G R+
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 17/229 (7%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT------ESRDLKAIQAF------ 172
Y + G+ A D M GCK ++ ++ +K L+ E+R I +
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEY 718
Query: 173 -----LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
L E + D+ + +I FC+ L++A ++ M++ G+ P Y +L
Sbjct: 719 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ K L + MV G P L ++ + + L + + +A + + G
Sbjct: 779 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 838
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
DEV + ++I G + +D ++ M + PN Y +I L
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 139/299 (46%), Gaps = 10/299 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ V L ++FD + L+E L + ++M +A K A++ F M
Sbjct: 155 SYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGM 214
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
+G K+ ++N + L + ++ +E K I + +FN++I +C+
Sbjct: 215 ERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEF--KDSILLNPHTFNVLIHGWCKARK 272
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A M EM++ G PDVI+YT+++ A+ ++ N + N M KGC PN+ T+ +
Sbjct: 273 MDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTI 332
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ L + +A ++ M+ PD Y+ +I ++G L A+ V+ M +
Sbjct: 333 VMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQG 392
Query: 322 LMPNRKIYQTMIHYLC----QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+P+ Y TMI C +E L M + S K P ++T S LL+ +NN+
Sbjct: 393 AIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCK----PDLNTYSPLLKMCCRNNR 447
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA + +A+ + +M +G V S + ++ +D + + + L E+ EK
Sbjct: 267 WCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEK-GCPP 325
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ IV+ A + + KA V +M+ PD Y++LI K R + ++
Sbjct: 326 NVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVF 385
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G P++ T+N I + A KL+ M+ +PD TY+ ++K CR+
Sbjct: 386 EDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRN 445
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ + + + M + Y ++H LC+ G A + ++ + K VP
Sbjct: 446 NRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVP 500
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M GK I A++ + M C ++ + +L+++ LK + ++ ++
Sbjct: 333 VMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQG 392
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+ ++N +I A C + A ++++M++ KPD+ TY+ L+ ++NR ++
Sbjct: 393 AIP-DVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVL 451
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L N M F N + V TY+L++ G
Sbjct: 452 SALLNHM-----FKNDISLEVG------------------------------TYSLLVHG 476
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMP 324
C+SG L+ A + M+ + L+P
Sbjct: 477 LCKSGKLEHACLFFEEMVSKGLVP 500
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 99/184 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F+ +I FC+ G +++ + ++ EM+K+G++ DV Y+ LIS F E G L+N M
Sbjct: 201 TFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEM 260
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ K PN+ T++ + L K++ +A +++ M + PD V Y ++ G ++G
Sbjct: 261 LRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRA 320
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A KV M+ R PN Y +I+ LC+EG + A + + KK P V T S L
Sbjct: 321 SDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTL 380
Query: 368 LEGL 371
++GL
Sbjct: 381 VKGL 384
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 121/320 (37%), Gaps = 75/320 (23%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K + A + F +M CK + +A + ++ D++ + F L+E EK ++ D
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE--EGFGLLEEMEKMGLEGD 233
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQK------------------------------- 214
+F ++ +I FC G +++ + EM +
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293
Query: 215 ----LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
V+PDV+ YT L K+ R + +LMV +G PN T+N I L +
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD---------------------- 308
R A ++ M + G +PD VTY+ ++KG C G +D
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFA 413
Query: 309 ---------------MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
AK+VY M+ R N Y +I G A + KD++
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473
Query: 354 KKNWVPSVDTISALLEGLKK 373
P+ T + L+ GL K
Sbjct: 474 DSGISPNAATYTVLINGLCK 493
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D V +M + V P + + LI +F +P G+ L++ +G N+ FN+
Sbjct: 76 DHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLL 135
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ S +A L +M+R + PD V+YN VI G C+ L AK+++ M G
Sbjct: 136 LKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGEC 195
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN + +I C+ GD + + ++ K V SAL+ G
Sbjct: 196 KPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGF 244
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 1/243 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G + A+ M G K V + + +K L + +A+ + + ++FHI+ D
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPD 410
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+FN+VI+ C+ L A V M + G +++TY LI + + LW
Sbjct: 411 VFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWK 470
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
V G PN AT+ V I L + A L + G P YN ++ CR
Sbjct: 471 DAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRES 530
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A+ ++ M P+ + +I + GD A + + + N VP T S
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFS 590
Query: 366 ALL 368
L+
Sbjct: 591 ILI 593
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 37/197 (18%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
FH+ ++++FN+++K FC+ G KA + M++ + PD ++Y T+I
Sbjct: 125 FHL--NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVI----------- 171
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
NGL CKG +R +A +L M+ +P+ VT++ +I
Sbjct: 172 -NGL-----CKG------------------KRLVEAKELFKEMKGGECKPNSVTFSALID 207
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC++G ++ + M L + +Y +I C +GD + + ++KN P
Sbjct: 208 GFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTP 267
Query: 360 SVDTISALLEGLKKNNQ 376
+V T S L+ L K +
Sbjct: 268 NVVTYSCLMNALCKKQK 284
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + TLI K + + + M FP + + I+ VN ++ A +
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+GL+ + G + +NL++KGFC+SG A ++ M L+P+ Y T+I+ LC+
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K+ P+ T SAL++G KN
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD 214
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +N ++ + C +++A + EM+ PDV+++ +I K E L
Sbjct: 516 VSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLL 575
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ P+ TF++ I + + +A L M G PD V ++ ++KG+ G
Sbjct: 576 EMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKG 635
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ-EGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ + M + ++ + K+ T++ LC D ++ I+ K S + S+
Sbjct: 636 KTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKC- 694
Query: 365 SALLEGLKKNNQPCKANTIMA 385
+ LL L K P AN ++A
Sbjct: 695 NELLMKLNK-VHPDNANILVA 714
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ E
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKME 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L+ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ ++ A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R + ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 104/191 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G L +
Sbjct: 136 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 315
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 316 TLIDGCCKEGD 326
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K K + ++ +QR
Sbjct: 376 GLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQR 409
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 312 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P++ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 372 MLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 130/273 (47%), Gaps = 52/273 (19%)
Query: 170 QAFLM-EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+AFL+ + +K + D++++ I+I +FC+ G++++A EM+ G P+V+TYT L+
Sbjct: 470 KAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALL 529
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPN--------------------------------- 255
A+ K + N +++ MV C+PN
Sbjct: 530 HAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDN 589
Query: 256 ------------------LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ T+ + L ++ A+ L+ M G EP+++ Y+ +
Sbjct: 590 IESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDAL 649
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ GFC+ G +D A++V+ M +P+ Y ++I + ++G +LA + +K +
Sbjct: 650 VDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 709
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T +A+++GL K + KA +++L++++
Sbjct: 710 NPNVVTYTAMVDGLCKTGETEKALNLLSLMEKK 742
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ VI C+ +DKA+L+ EM+K+GV PDV TYT LI +F K E +
Sbjct: 451 DASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWF 510
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M GC PN+ T+ + + ++ +QAN + M P+ +TY+ +I G C++
Sbjct: 511 DEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKA 570
Query: 305 GHLDMAKKVYSAMLGRR----------------LMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G + A +VY+ ++G + PN Y +++ LC+ + A+ +
Sbjct: 571 GEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDL 630
Query: 349 CKDSMKKNWVPSVDTISALLEGLKK 373
+ P+ AL++G K
Sbjct: 631 LDAMLAAGCEPNQIVYDALVDGFCK 655
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 8/224 (3%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V L A KV +++ DL + A L E I +D ++ FC++G +D A V
Sbjct: 615 VNGLCKAQKV-SDAHDL--LDAMLAAGCEPNQIVYDA-----LVDGFCKVGEIDSAQEVF 666
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+ M K G P V TYT+LI +KD R ++ + + M+ C PN+ T+ + L
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKT 726
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ +A L+ LM++ G P+ VTY +I G ++G +D +++ M + PN Y
Sbjct: 727 GETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTY 786
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ +I++ C G + A+++ + + +W + ++G K
Sbjct: 787 RILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK 830
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+++ E+ + D +I E + ++A + M+ P+V+TY TL++ F K
Sbjct: 259 LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLK 318
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + N+M+ +GC P+ + FN + N A KL M G P V
Sbjct: 319 KKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVV 378
Query: 294 YNLVIKGFCRSGH------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
YN+ I C LD+A+KVY ML + N+ LC G F A+
Sbjct: 379 YNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQ 438
Query: 348 MCKDSMKKNWVPSVDTISALL 368
+ K+ M+K +VP T + ++
Sbjct: 439 IVKEMMRKGFVPDASTYTKVI 459
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ C +G +KA+ ++ EM + G PD TYT +I+ + R + L+ M G
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ T+ + I QA M+ G P+ VTY ++ + +S L A +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA------YIMCKDSMKKNWV--------- 358
+ M+G PN Y +I LC+ G+ A I D+++ ++
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604
Query: 359 -PSVDTISALLEGLKKNNQPCKANTIM 384
P+V T AL+ GL K + A+ ++
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLL 631
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ ++ C+ G +KA ++ M+K G P+V+TYT LI K + + G L+
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771
Query: 245 NLMVCKGCFPNLATFNVRIQHLVN--------------KRRSWQA------NKLMGLMQR 284
M KGC PN T+ + I H K+ W + G +R
Sbjct: 772 MQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR 831
Query: 285 F-------------GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---GRRLMPNRKI 328
F P Y ++I F ++G L+ A +++ M+ M ++ +
Sbjct: 832 FLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDM 891
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ ++I LC A + + ++ VP + L++GL + N+
Sbjct: 892 HTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNK 939
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 121/330 (36%), Gaps = 51/330 (15%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK FQ+ K + + + + ++ L A+R D L + K +
Sbjct: 434 EKAFQIVK-EMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-------------- 166
++ + KAG+I+ A F +M GC V + A L +S+ L
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552
Query: 167 ----------------------KAIQAFLMEVPEKFHIQFDIF--------------SFN 190
KA + + + +I+ D + ++
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ + A+ ++ M G +P+ I Y L+ F K + ++ M
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T+ I + R A K++ M + P+ VTY ++ G C++G + A
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKA 732
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ S M + PN Y +I L + G
Sbjct: 733 LNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA + A D M GC+ +A + + ++ + Q + + + ++ +
Sbjct: 620 KAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLP-SV 678
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I + G LD A V+ +M K P+V+TYT ++ K E L +L
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KGC PN+ T+ I L + +L M+ G P+ VTY ++I C +G
Sbjct: 739 MEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW- 273
LG + T L+ +D+R +G L N++V + C L W
Sbjct: 144 LGFEDPARTAERLLREIGEDDRDVLGR-LLNVLVRRCCLQGL----------------WG 186
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A + +G ++ FG P VTYN +++ +G ++MA +V M +R +
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246
Query: 334 HYLCQEGDFNLAY-IMCKDSMKKNWVPSVDTISALLE 369
LC+EG + A ++ ++ K + V IS L+E
Sbjct: 247 QALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLME 283
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D F ++ G + V + A + L S L ++ ++ I ++ +++
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKR-KITPNVITYS 264
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ AF + G + +A + EM ++ + PD++TY++LI+ +R + N +++LMV K
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GCFP++ ++N I +R KL M + G+ + VTYN +I+GF + G +D A
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ +S M + P+ Y ++ LC G A ++ +D K + T + +++G
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQG 444
Query: 371 LKKNNQ 376
+ K +
Sbjct: 445 MCKTGK 450
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D+++FNIVI FC + A V+ +M KLG +PD +T +L++ F + NR
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L + MV G P++ +N I L RR A + R GI P+ VTY +
Sbjct: 172 SDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTAL 231
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C SG + A ++ M+ R++ PN Y ++ + G A + ++ ++ +
Sbjct: 232 VNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSI 291
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALV 387
P + T S+L+ GL +++ +AN + L+
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I + C+ ++ A E+ + G++P+V+TYT L++ R L
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + PN+ T++ + V + +A ++ M R I+PD VTY+ +I G C
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A +++ M+ + P+ Y T+I+ C+ + + ++ V + T
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368
Query: 365 SALLEGL 371
+ L++G
Sbjct: 369 NTLIQGF 375
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I FN ++ A +M D + +M+ LG++ D+ T+ +I+ F + + +
Sbjct: 85 IVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLG 144
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P+ T + + R A L+ M G PD V YN +I C++
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTR 204
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A + + + + PN Y +++ LC G +N A + +D +K+ P+V T S
Sbjct: 205 RVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS 264
Query: 366 ALLEGLKKNNQPCKANTI 383
ALL+ KN + +A I
Sbjct: 265 ALLDAFVKNGKVLEAKEI 282
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA ++ M F M G + N ++ + D+ Q F ++ + F +
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM-DSFGVSP 398
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI+++NI++ C+ G+L+KA ++ +MQK + D++TYTT+I K + E GL+
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG ++PD VTY ++ G C
Sbjct: 459 CSLSLKG-----------------------------------LKPDIVTYTTMMSGLCTK 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-QEGDFNLAYIMCKDSMKKNWVPSV 361
G + +Y+ M LM N + LC +GD ++ + K + + PS+
Sbjct: 484 GLQHEVEALYTKMKQEGLMKNDSM-------LCLGDGDITISAELIKKMLSCGYAPSL 534
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FP++ FN + +V ++ L M+ GI D T+N+VI FC + +A
Sbjct: 82 FPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V ML P+R ++++ C+ + A + ++ + P + +A+++ L
Sbjct: 142 VLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLC 201
Query: 373 KNNQ 376
K +
Sbjct: 202 KTRR 205
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A D F +M + G K +++ N ++ + ++++ L+E+ +K ++ +
Sbjct: 384 KIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI-KKENLTANA 442
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++ C G L +A + EM G+KP+++ YTT++ K+ R E + +
Sbjct: 443 YMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGV 502
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P++ +N I + + + M G++P+ TY I G+CR+G
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A++ + ML + PN I +I C++G+ A+ + + + +P V T S
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622
Query: 367 LLEGLKKNNQ 376
L+ GL KN +
Sbjct: 623 LIHGLSKNGK 632
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 35/234 (14%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE--- 238
I+ + F++ +I C++G L+KA + EM +G+KPD+ TY LI +YK E
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427
Query: 239 --------------------IGNGL------------WNLMVCKGCFPNLATFNVRIQHL 266
I NGL + M+ G PN+ + ++ L
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
V + R +A K++G+M+ G+ PD YN VI GFC++G ++ K M+ + L PN
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
Y IH C+ G+ A + + P+ + L++G K+ KA
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 3/254 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDI 186
G + A + F +M +G K + +K L E R +AI+ ++ V + + D+
Sbjct: 455 CGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIK--ILGVMKDQGLSPDV 512
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F +N VI FC+ G +++ +VEM G+KP+V TY I + + + +
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G PN I + +A M G+ PD T++++I G ++G
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A V+S +L + L+P+ Y ++I LC+EGD A+ + D KK P++ T +A
Sbjct: 633 LQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNA 692
Query: 367 LLEGLKKNNQPCKA 380
L+ GL K + KA
Sbjct: 693 LINGLCKLGEIAKA 706
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ +I A+C +G +++ V+ +M++ G P+++TY+ +I+ + + L
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P+ + I ++RS + ++ M G++PD V Y +I GF +
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ 350
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A +V M R++ N Y +IH LC+ GD A + + P + T
Sbjct: 351 SDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTY 410
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+EG K KA ++ +++
Sbjct: 411 NCLIEGYYKVQNMEKAYELLIEIKKE 436
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 134/281 (47%), Gaps = 7/281 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ + KAG ++ +M G K V + A + + +++A + +E+ +
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D+ ++ I +C+ G KA+ M GV PDV T++ LI K+ + +
Sbjct: 578 IAPNDVICTDL-IDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
G+++ ++ KG P++ T+ I +L + A +L M + GI P+ VTYN +I G
Sbjct: 637 MGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G + A++++ + + L N Y T+I C+ + A+ + MK VP
Sbjct: 697 LCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFH-GMKLVGVPP 755
Query: 361 VDTI-SALLEGLKKNNQPCKANTI-MALVQRRV---PHFSS 396
+ AL++G K KA ++ + +V+ + P F++
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNA 796
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +++I + G L +A V E+ G+ PDV TYT+LIS K+ + L
Sbjct: 616 DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELH 675
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG PN+ T+N I L +A +L + G+ + VTY+ +I G+C+S
Sbjct: 676 DDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKS 735
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+L A +++ M + P+ +Y +I C+ G+ A + M + + S
Sbjct: 736 ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFL-GMVEEGIASTPAF 794
Query: 365 SALLEGLKK 373
+AL++G K
Sbjct: 795 NALIDGFFK 803
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
Q+ + G + ++ ++ G K G + A+ M G V N + ++
Sbjct: 466 QEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKA 525
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
++ +++L+E+ K ++ +++++ I +C G + A +EM G+ P+ +
Sbjct: 526 GKMEEGKSYLVEMIAK-GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
T LI + KD + M+ +G P++ T +V I L + +A + +
Sbjct: 585 CTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G+ PD TY +I C+ G L A +++ M + + PN Y +I+ LC+ G+
Sbjct: 645 DKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A F M G V++ + + L+++ L+ E+ +K +
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP- 650
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++ +I C+ G L A+ + +M K G+ P+++TY LI+ K L+
Sbjct: 651 DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELF 710
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+ + KG N T++ I +A +L M+ G+ PD Y
Sbjct: 711 DGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKA 770
Query: 295 ------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
N +I GF + G L A ++ M+ + PN Y
Sbjct: 771 GNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYT 830
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+I Y C G+ A + + K+N +P+V T ++LL G
Sbjct: 831 ILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 5/268 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ +DM GC + + + + L + D+ + K +
Sbjct: 242 YCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLP- 300
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + + +I FC + ++ EM +G+KPD + YT LI+ F K + +IG
Sbjct: 301 DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK--QSDIGGAFQ 358
Query: 245 --NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M + N T+ I L +A L M GI+PD TYN +I+G+
Sbjct: 359 VKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYY 418
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ +++ A ++ + L N + +++ LC GD A + ++ + P++
Sbjct: 419 KVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIV 478
Query: 363 TISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++GL K + +A I+ +++ +
Sbjct: 479 IYTTIVKGLVKEGRFEEAIKILGVMKDQ 506
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 121/303 (39%), Gaps = 35/303 (11%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A + DM G + + NA + L + ++ + +PEK + +
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK-GLARNS 722
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I +C+ L +A+ + M+ +GV PD Y LI K E L+
Sbjct: 723 VTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLG 782
Query: 247 MVCKGC----------------------------------FPNLATFNVRIQHLVNKRRS 272
MV +G PN T+ + I++
Sbjct: 783 MVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A +L MQ+ + P+ +TY ++ G+ R G ++ M+ R + P+ + M
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ +EG++ A + D + + + + L++ L K+N + ++ V+++
Sbjct: 903 VDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGS 962
Query: 393 HFS 395
S
Sbjct: 963 KLS 965
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 37/203 (18%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ D ++NI+I FC L +AY ++ EM+++G++PDV TY TL+S K
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK--------- 435
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
G F + ++L+G M G +P +T+ ++ G+C
Sbjct: 436 -------AGDFAAV-------------------DELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS-V 361
+ G +D A ++ +M + PN IY T+I +LC+ GD +LA I D MK+ VP+ V
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLA-IELFDEMKEKSVPANV 528
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
T +ALL+GL+ N P KA +M
Sbjct: 529 TTFNALLKGLRDKNMPEKAFELM 551
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ L L RD+ + + ++ D+ ++ I++ C+ G + A V+
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 210 VEM--QKLGVKPDVITYTTLISAFYKDNRPEIGNGL--WNLMVCKGCFPNLATFNVRIQH 265
M Q L ++PDV+T T++ K R + + GC PN T+N I
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
A +L+ M+ G+ + VT N ++ G CR+G A + + R + P
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREK--RTVWPE 313
Query: 326 RK----IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
K Y T++ L + +A + + M + P ++ GL +
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F+FN ++ A + + + MQ V+PDV+TY L++ K R +G+ L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGR--VGDAL 192
Query: 244 WNLMVCK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF----GIEPDEVTYN 295
L P++ T N + L R +A L + QR G P+ VTYN
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA--LAFVEQRMSSVHGCPPNTVTYN 250
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+I FCR G++ MA ++ M + N T++ LC+ G
Sbjct: 251 CLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + +M G + V + N L ++ D A+ L ++ + Q + +F
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD-GCQPSVITFG 462
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ +C++G +D+A ++ M + G+ P+ + Y TLI K ++ L++ M K
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
N+ TFN ++ L +K +A +LM M+ PD VT +++++ G D
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Query: 311 KK 312
K+
Sbjct: 583 KR 584
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 99 VLEHLMKLKYFKLVWGFYEEILECGY-PASLYFFNILMHRFCKDGDIRVAQSVFDAITKW 157
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 158 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 217
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 218 NELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 277
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 278 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 318
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 130 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 187
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 188 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNG 247
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD+ TY
Sbjct: 248 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 307
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 308 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 367
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ P T + ++ K K + ++ +QR
Sbjct: 368 DLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 401
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 245 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKPDK 303
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 304 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 363
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 364 MLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K ++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ +M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 88/156 (56%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I+ C+ G++D+A+ ++ ++ G +PDVI+Y L+ A + E G L
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C PN+ T+++ I L + +A L+ LM+ G+ PD +Y+ +I FCR
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD+A + M+ +P+ Y T++ LC+ G
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD- 185
K GM+ A + ++ L G + V S N L+ L + + + ++ F + D
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM---FSEKCDP 331
Query: 186 -IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++I+I C G +++A ++ M++ G+ PD +Y LI+AF ++ R ++
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ GC P++ +N + L ++ QA ++ G + G P+ +YN + S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A + M+ + P+ Y +MI LC+EG + A+ + D + PSV T
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 365 SALLEGLKKNNQPCKANTI 383
+ +L G CKA+ I
Sbjct: 512 NIVLLGF------CKAHRI 524
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ EKF Q D+F++N +I FC+M +D A V+ M+ PD +TY +I +
Sbjct: 146 VMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ + N ++ C P + T+ + I+ + + +A KLM M G++PD
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN +I+G C+ G +D A ++ + + P+ Y ++ L +G + +
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T S L+ L ++ + +A ++ L++ +
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 102/200 (51%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ Q + ++ I+I+A G +D+A +M EM G+KPD+ TY T+I K+ +
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + KG P++ ++N+ ++ L+N+ + + KLM M +P+ VTY+++I
Sbjct: 283 FEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
CR G ++ A + M + L P+ Y +I C+EG ++A + + +P
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 361 VDTISALLEGLKKNNQPCKA 380
+ + +L L KN + +A
Sbjct: 403 IVNYNTVLATLCKNGKADQA 422
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I + C G LD A V+ ++ +P VITYT LI A + + L
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P++ T+N I+ + + +A +++ ++ G EPD ++YN++++
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQ 311
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +K+ + M + PN Y +I LC++G A + K +K P +
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 365 SALL 368
L+
Sbjct: 372 DPLI 375
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 156 ALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
++ + T RD K +A L+++ ++ + D +S++ +I AFC G LD A + M
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
G PD++ Y T+++ K+ + + ++ + GC PN +++N L + +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 275 ANKLMGLMQRFGIEPDE-----------------------------------VTYNLVIK 299
A ++ M GI+PDE VTYN+V+
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
GFC++ ++ A V +M+G PN Y +I
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ Y+++ ++ R D LE S LP ++ + GKA A+
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA---DQAL 423
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ F + GC S N L S D ++A+ L + I D ++N +I
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG--IDPDEITYNSMIS 481
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C G++D+A+ ++V+M+ P V+TY ++ F K +R E + MV GC P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 255 NLATFNVRIQHL 266
N T+ V I+ +
Sbjct: 542 NETTYTVLIEGI 553
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G L++ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M+ + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A ++ EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K G++P V+++ TL++ + K G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 101/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +FC+ G + A V + K G++P V+++ TL++ + K G L N
Sbjct: 136 LYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G L++ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ T + ++ K + +M +QR
Sbjct: 376 GLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 409
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G + T+ + I K W +KLM MQR G P VT
Sbjct: 372 MLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 37/203 (18%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ D ++NI+I FC L +AY ++ EM+++G++PDV TY TL+S K
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK--------- 435
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
G F + ++L+G M G +P +T+ ++ G+C
Sbjct: 436 -------AGDFAAV-------------------DELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS-V 361
+ G +D A ++ +M + PN IY T+I +LC+ GD +LA I D MK+ VP+ V
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLA-IELFDEMKEKSVPANV 528
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
T +ALL+GL+ N P KA +M
Sbjct: 529 TTFNALLKGLRDKNMPEKAFELM 551
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ L L RD+ + + ++ D+ ++ I++ C+ G + A V+
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 210 VEM--QKLGVKPDVITYTTLISAFYKDNRPEIGNGL--WNLMVCKGCFPNLATFNVRIQH 265
M Q L ++PDV+T T++ K R + + GC PN T+N I
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
A +L+ M+ G+ + VT N ++ G CR+G A + + R + P
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREK--RTVWPE 313
Query: 326 RK----IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
K Y T++ L + +A + + M + P ++ GL +
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F+FN ++ A + + + MQ V+PDV+TY L++ K R +G+ L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGR--VGDAL 192
Query: 244 WNLMVCK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF----GIEPDEVTYN 295
L P++ T N + L R +A L + QR G P+ VTYN
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA--LAFVEQRMSSVHGCPPNTVTYN 250
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+I FCR G++ MA ++ M + N T++ LC+ G
Sbjct: 251 CLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + +M G + V + N L ++ D A+ L ++ + Q + +F
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDD-GCQPSVITFG 462
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ +C++G +D+A ++ M + G+ P+ + Y TLI K ++ L++ M K
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
N+ TFN ++ L +K +A +LM M+ PD VT +++++ G D
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRL 582
Query: 311 KK 312
K+
Sbjct: 583 KR 584
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 3/227 (1%)
Query: 145 GCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ V + N + L E R L+A +A + + E H Q + ++ ++ C+MG D
Sbjct: 5 GCQHDVVAFNTLMNGLCREGRVLEA-EALVDRMVENGH-QPNEVTYGTIVNGMCKMGDTD 62
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ +M + +K DV+ YT +I KD L+ M KG FPN+ T+N I
Sbjct: 63 SALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMI 122
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + A +L+ M ++PD VT+N +I F + G + A+++Y MLGR +
Sbjct: 123 DGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIF 182
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
P+ Y ++I C+ + A + + K P+V TI+ L+ G
Sbjct: 183 PDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGG 229
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I C G A ++ +M + V PDV+T+ LI+AF K+ + L+
Sbjct: 114 NVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELY 173
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + FP+ T+N I R A + LM G P+ +T N +I G CR+
Sbjct: 174 REMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRA 233
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+D K+ ML R L+P+ Y T+IH CQ GD N A
Sbjct: 234 KRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAA 274
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G + DV+ + TL++ ++ R L + MV G PN T+ + +
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ A L+ M I+ D V Y +I C+ GH A+ +++ M + + PN Y
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
MI C G + A + +D ++ N P V T +AL+ K + +A
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEA 169
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ +I A C++G +D A L +M GV P++ + +L+ ++ E +
Sbjct: 412 DVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY 471
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P++ FN + +L K + +A +L+ LM+R G P ++Y +I G C
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV 531
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K ML L P+ Y T++H C+ G + AY + ++ ++ P V T
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 365 SALLEGL 371
S +L GL
Sbjct: 592 STILHGL 598
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 145 GCKRTVKSLNAALK-VLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
GC V S N LK E R +A++ +M + ++ S+ IVI F G +
Sbjct: 160 GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQV 219
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
DKAY + +EM G++P+V+TYTT+I K + G++ M+ KG P+ T+N
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I ++ + + +++ M G++PD TY ++ C +G A+ ++ +M+ + +
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGI 339
Query: 323 MPNRKIYQTMIHYLCQEG 340
PN IY +IH +G
Sbjct: 340 KPNVAIYGILIHGYATKG 357
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 114/243 (46%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A + F +M G + V + + L +++ + + ++ +K ++ D +
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDT 275
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I + +G + ++ EM G+KPD TY +L++ + R L++ M+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN+A + + I K + + L+ LM G+ PD +N++ + + +D
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M + L P+ Y +I LC+ G + A + M + P++ ++L+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 369 EGL 371
GL
Sbjct: 456 YGL 458
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ + G ++H TF + G + +N LK L +++ L +A+ + +PE
Sbjct: 104 FCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPE-LGCT 162
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D+ S+N ++K FC ++A + M + Q P+V++Y +I+ F+ + + +
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKA 222
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M+ +G PN+ T+ I L + +A + M G++PD TYN +I G
Sbjct: 223 YNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHG 282
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ G ++ M L P+ Y ++++YLC G A + ++K P+
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPN 342
Query: 361 VDTISALLEG 370
V L+ G
Sbjct: 343 VAIYGILIHG 352
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 190 NIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
N ++K C+ L +A ++V+ M +LG PDV++Y TL+ F + R E L ++M
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 249 ---CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ C PN+ ++ + I + + +A L M GI+P+ VTY VI G C++
Sbjct: 193 DSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A+ V+ M+ + + P+ Y +IH G + M ++ P T
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312
Query: 366 ALLEGLKKNNQPCK 379
+LL L NN C+
Sbjct: 313 SLLNYL-CNNGRCR 325
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL- 243
D +++N ++ +C G +D AY V EM + G+ P V+TY+T++ + R L
Sbjct: 552 DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELY 611
Query: 244 ---------WNLMV------------------------CKGCFP-NLATFNVRIQHLVNK 269
WN+ + C F + TFN+ I L
Sbjct: 612 LNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS 671
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R+ A L + +G+ PD TY L+ + G+L+ ++SAM PN ++
Sbjct: 672 GRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731
Query: 330 QTMIHYLCQEGDFNLA-YIMCKDSMKKNWVPSVDTISALLEGLKKN 374
++ L GD A +CK +KN+ T + L+ L ++
Sbjct: 732 NALVRRLLHRGDITRAGAYLCKLD-EKNFSLEASTTAMLISLLSRD 776
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ ++ C G +A + M + G+KP+V Y LI + + L
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
NLMV G P+ FN+ K +A + M++ G+ PD V Y +I C+
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M+ + PN ++ ++++ LC + A + + + P V
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ +L L Q KA ++ L++R
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMER 511
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
M+ + V PD TY+ LI F + R E G + L++ G N N ++ L +
Sbjct: 82 MIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141
Query: 269 KRRSWQA-NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---GRRLMP 324
+R +A + L+ M G PD V+YN ++KGFC + A ++ M GR P
Sbjct: 142 AKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
N Y +I+ EG + AY + + M + P+V T + +++GL CKA +
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGL------CKAQVV 254
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 5/252 (1%)
Query: 123 MLYGKAGMIK--HAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEK 179
++YG + K A + +++M G + V N L + T+ + +KA + L+++ E+
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR--LIDLMER 511
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ + S+ +I C +G +D+A + M +G+KPD TY TL+ + + R +
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
G++ M+ G P + T++ + L RR +A +L M G + + YN+++
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G ++ +D A K++ ++ + + MI L + G A + VP
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 360 SVDTISALLEGL 371
V T + E L
Sbjct: 692 DVFTYCLIAENL 703
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F M G + N+ + L + + F E+ + I+ D+
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-GIRPDV 483
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN ++ C G + KA ++ M+++G +P VI+YTTLI R + ++
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+N + R A + M R GI P VTY+ ++ G +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
AK++Y M+ N IY +++ L + + A+ + + K++ + T +
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
++ L K+ + A + A +
Sbjct: 664 MIGALFKSGRNEDAMHLFATIS 685
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 3/267 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + GMIK TF + GC +V S N L L + + E+ + I
Sbjct: 189 YVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMA-RVGIHP 247
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++FNI+ FC+ G +DK + M++ G +PD++TY TLIS + + R + L+
Sbjct: 248 NSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLY 307
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + P+L ++ + L + + +A++L M G+ PD V++N +I G+C+
Sbjct: 308 RIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKE 367
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVDT 363
G + ++ + M+G + P++ Q +I +E A + + +++ VP S D
Sbjct: 368 GKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVE-LERFGVPISTDI 426
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
L+ + + +P A +++ + +R
Sbjct: 427 YDYLMVSICEEGRPFAAKSLLQRISQR 453
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKF-----HIQFDIFSFNIVIKAFCEMGILDKA 205
K A+K LTE L +F +V + +D F++++KA+ G++ +
Sbjct: 139 KEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEG 198
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ ++ ++G P VI+ L++ K NR + ++ M G PN TFN+
Sbjct: 199 FTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHV 258
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ N + M+ G EPD VTYN +I +CR G LD A +Y M R ++P+
Sbjct: 259 FCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPD 318
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y +++ LC+EG A+ + + + P + + + L+ G K +
Sbjct: 319 LVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGK 369
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ ++ C+ G + +A+ + M G+ PD++++ TLI + K+ + L
Sbjct: 318 DLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLL 377
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T V I+ + R A L+ ++RFG+ Y+ ++ C
Sbjct: 378 HEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEE 437
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G AK + + R +P +IY +I LC+ A ++ + +N PS T
Sbjct: 438 GRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITY 497
Query: 365 SALLEGLKKNNQPCKANTIM 384
AL+ L + ++ +A ++M
Sbjct: 498 KALICCLCRTSRSMEAESLM 517
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 13/225 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV------PEKF 180
K G ++ A F+ M G + S N + + ++ ++ L E+ P+K
Sbjct: 331 KEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKV 390
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
Q ++I+ + + + A ++VE+++ GV Y L+ + ++ RP
Sbjct: 391 TCQ-------VLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAA 443
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + +G P + +N I+ L A + M I+P +TY +I
Sbjct: 444 KSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICC 503
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
CR+ A+ + ML ++P+ I + ++H C+E D A
Sbjct: 504 LCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKA 548
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G L++ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M+ + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A ++ EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ F + G + A V + K G++P V+++ TL++ + K G L N
Sbjct: 136 LYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G +P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G L++ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M+ + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A ++ EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD+ TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQR 409
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K G++P V+++ TL++ + K G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G +P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD---- 165
P R +++ + L GK G A+ F M ++ C+ + + + L + +
Sbjct: 175 PNTRTFTNLVKGLCLEGKIG---EAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNA 231
Query: 166 LKAIQAFLMEVPEKFHIQF--DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
LK +A ++ F I + S++ +I + C+ G++++A VEM++ G+ P+V+T
Sbjct: 232 LKLHEA-MINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVT 290
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
YT+L+ + E L+ MV G P++ TF+V I L + +A+ L LM
Sbjct: 291 YTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMV 350
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ +EP TYN++I+G+C +G +D KK++ +M+ +R + Y ++ C++ + +
Sbjct: 351 QRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVH 410
Query: 344 LAYIMCKDSMKKNWVPSVDTIS 365
A I+ ++ M + P+V T S
Sbjct: 411 GAMILYREMMDRGIQPTVITYS 432
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 64/298 (21%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
CK TV S + + L + ++ + F +E+ EK I ++ ++ ++ C ++A
Sbjct: 249 CKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEK-GIFPNVVTYTSLLHGLCSASEWEEA 307
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ- 264
+ +EM G+ PDV+T++ LI A K + + +GL++LMV + P+ T+N+ I+
Sbjct: 308 KRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEG 367
Query: 265 ---------------HLVNKRRSWQANKLMGLMQRF-------------------GIEPD 290
+VNKR A LM+ + GI+P
Sbjct: 368 YCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPT 427
Query: 291 EVTY----------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+TY N+ + G C++G + A V+ + +
Sbjct: 428 VITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKF 487
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
N I+ ++I+ +C+ +A+ + + P V T + ++ GL K QP KA
Sbjct: 488 ASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKA 545
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI-----QAFLMEVPEKFH 181
K G +K A F D+ + +R V+ +L E L + + FL V ++
Sbjct: 335 KVGKVKEASGLF-DLMV---QRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKR-- 388
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
Q D S++I++KA+C+ + A ++ EM G++P VITY+ + D R G
Sbjct: 389 CQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKV-----GDARKLFGE 443
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ MV + + +NV + L +A + ++ + +N +I G
Sbjct: 444 IQFQDMVLDS--ISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGM 501
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CRS L++A ++++ + L P+ Y MI+ LC+ G AY + + +K P+V
Sbjct: 502 CRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNV 561
Query: 362 DTISALLEGLKKNNQ 376
T + L+ GL N++
Sbjct: 562 VTFNTLMRGLCLNSE 576
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ S NI++ C + + + ++V + + G +P+ T+T L+ + + ++
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM----QRFGI--EPDEVTYNLVI 298
+M C P+ T V I L + A KL M FGI +P V+Y+ +I
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCII 260
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ G ++ AK+ + M + + PN Y +++H LC ++ A + + + +
Sbjct: 261 DSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLL 320
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMAL-VQRRV 391
P V T S L+ L K + +A+ + L VQR V
Sbjct: 321 PDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYV 354
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M +G+ + I+ L++ R G ++ +++ KG PN TF ++ L + +
Sbjct: 133 MNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGK 192
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPN 325
+A ++ +M F P +T ++I G CR+G+ A K++ AM+ G P
Sbjct: 193 IGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPT 252
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y +I LC++G A + +K P+V T ++LL GL
Sbjct: 253 VVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGL 298
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 72/155 (46%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+ + C+ G + +A V ++ +V + +LI+ + + EI L+N +
Sbjct: 459 YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLC 518
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ P++ T+ + I L + +A L M+ G P+ VT+N +++G C +
Sbjct: 519 NEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERP 578
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
++ M R+L P+ ++ L ++ +++
Sbjct: 579 KIVELLHKMAARKLSPDASTLLIVMDILLKDENYH 613
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+N M+ P L+ FN L K++ + G M G+ + ++ N+++ C
Sbjct: 94 FFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLC 153
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ V+ +L + PN + + ++ LC EG A + K + PS
Sbjct: 154 SVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAI 213
Query: 363 TISALLEGLKKNNQPCKA 380
T L+ GL + C A
Sbjct: 214 TCGVLISGLCRTGNTCNA 231
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLN--EGFKLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ LM M G++PD++TY
Sbjct: 256 RVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSF 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 376 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 409
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 103/191 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + G L +
Sbjct: 136 LYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKS 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A +VY ML + L+P+ Y T+I+ LC++G N A+ + + K P T +
Sbjct: 256 RVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYT 315
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 316 TLIDGCCKEGD 326
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 35/144 (24%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT------------------- 225
D+ ++N +I C+ G L++A+ +M EM G+KPD ITYT
Sbjct: 275 DLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHR 334
Query: 226 ----------------TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
LIS ++ R + M+ G P+ T+ + I K
Sbjct: 335 KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKK 394
Query: 270 RRSWQANKLMGLMQRFGIEPDEVT 293
W+ +KL+ MQR G P VT
Sbjct: 395 GDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRJAQSVFDAITKW 171
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L P+ Y T+I+
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 292 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 332
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K ++ +QR
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQR 415
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 46/304 (15%)
Query: 82 AFEDTVSRLAGARRFDYIEHLL-------EHQKSLPQ-GRREGFIMRIMMLYG--KAGMI 131
++ + L A+R+D +E L+ E +P+ G M ++ G K G
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 274
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A D M YG K V N LK L + + + L E+ ++ D +FNI
Sbjct: 275 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCPLDDVTFNI 333
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD-----------NRPEIG 240
++ FC+ G++D+ ++ +M + G PDVITYTT+I+ F K+ N G
Sbjct: 334 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393
Query: 241 ------------NGL-----W-------NLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
GL W + M+ +GC PN TFN I + K + QA
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAI 453
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+L+ M G PD ++Y+ VI G ++G + A ++ + M+ + + PN IY +M L
Sbjct: 454 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513
Query: 337 CQEG 340
+EG
Sbjct: 514 SREG 517
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +LEH G I ++ G K G++ A+ +M GCK
Sbjct: 346 RVIELLEQMLEH------GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI 399
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + Q + + ++ + + +FN +I C+ G+ ++A ++ +
Sbjct: 400 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV-TFNTLINFMCKKGLAEQAIELLKQ 458
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + E L N+M+ KG PN ++ L + R
Sbjct: 459 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ + ++ +Q + D YN VI C+ D A ++ M+ MPN Y
Sbjct: 519 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTI 578
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 579 LIRGLASEG 587
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 131/316 (41%), Gaps = 8/316 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMM-LYGKAGMIKHAM 135
N + + L A R++ E LL Q+ P + I++ + + G++ +
Sbjct: 292 NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP---LDDVTFNILVDFFCQNGLVDRVI 348
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC V + + + L L++ + + S+ IV+K
Sbjct: 349 ELLEQMLEHGCIPDVITYTTVINGFCK-EGLVDEAVMLLKNMSACGCKPNTISYTIVLKG 407
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C A ++ M + G P+ +T+ TLI+ K E L M+ GC P+
Sbjct: 408 LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPD 467
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L +++ I L ++ +A +L+ +M GI P+ + Y+ + R G D +++
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 527
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
++ + + +Y +I LC+ + + A + +P+ T + L+ GL
Sbjct: 528 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 587
Query: 376 QPCKANTIMA-LVQRR 390
+A +++ L RR
Sbjct: 588 LVREAQDLLSELCSRR 603
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 21/271 (7%)
Query: 111 QGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
GR I R + G+ A+DT D V + NA + + + A +
Sbjct: 44 SGRLSALI-RSLCAAGRTADAARALDTAGD------AAGVVAYNAMIAGYCRAGQVAAAR 96
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
VP + + +++ ++++ C G++ A V+ EM G ++ A
Sbjct: 97 RLAAAVP----VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEA 152
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ ++ KGC + N+ + + + + +L+ + FG EPD
Sbjct: 153 ACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPD 212
Query: 291 EVTYNLVIKGFCRSGHLDMAKKV----------YSAMLGRRLMPNRKIYQTMIHYLCQEG 340
V+YN V+KG C + D +++ S M P+ ++Y T+I +C++G
Sbjct: 213 IVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDG 272
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+A + P+V + +L+GL
Sbjct: 273 HHEVANDILSRMPSYGLKPNVVCYNTVLKGL 303
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 170 QAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+AF L EV I D ++NI + C+ G L AY++ ++M G++PD ITYT LI
Sbjct: 495 EAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLI 554
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
A + R +++ M+ G P+ T+ V I + + A M G+
Sbjct: 555 HAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVR 614
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+EVTYN++I CR G ++A + + ML R L PN+ Y +I C+EG++ A +
Sbjct: 615 PNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRL 674
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + P T +AL +G +
Sbjct: 675 YSEMHQHGIHPDHCTHNALFKGFDEGQS 702
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A +M GC+ V + + + R+L ++ F E+ K +Q
Sbjct: 417 YCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK-GLQP 475
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N I A +G +A+ + M G+ D +TY + K + LW
Sbjct: 476 DCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLW 535
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P+ T+ I + R +A + M G+ P VTY + I +CR
Sbjct: 536 MKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRR 595
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A + ML + PN Y +IH LC+ G NLAY + +++ P+ T
Sbjct: 596 GNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTY 655
Query: 365 SALLEG 370
+ L++G
Sbjct: 656 TLLIDG 661
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 1/242 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G ++ A F +M G + + N+ + ++ +LK ++ ++ + +
Sbjct: 349 RSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL-KRAGLAPSV 407
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI++ +C +G L++A EM + G +PDV TYT L++ K + ++
Sbjct: 408 LTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDE 467
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P+ +N RI + + +A +L +M GI D VTYN+ + G C+SG+
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A ++ M+ L P+ Y +IH C+ G A + + PS T +
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587
Query: 367 LL 368
+
Sbjct: 588 FI 589
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N+V++A + D V EM +LG++P ++TY TL+ +F+++ R + L M
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259
Query: 250 K--GCFPNLATFNVRIQHLVNKRRSWQANKLMGL-------------------------- 281
+ GC P+ T+NV I L K +A +L+
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVE 319
Query: 282 --------MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
M+ GI P VTYN +I G RSG+++ A+ + M L+P+ Y ++I
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLI 379
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ C+ G+ A + D + PSV T + LL+G
Sbjct: 380 NGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDG 416
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A+ F D+ G +V + N L DL+ + F E+ E+ Q
Sbjct: 382 YCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ-GCQP 440
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ ++ L EM G++PD Y T ISA L
Sbjct: 441 DVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLT 500
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M+ +G + T+N+ + L A L M G++PD +TY +I C
Sbjct: 501 EVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCER 560
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A+ ++ ML L P+ Y IH C+ G+ AY + +++ P+ T
Sbjct: 561 GRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTY 620
Query: 365 SALLEGL 371
+ L+ L
Sbjct: 621 NVLIHAL 627
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+FN +I + G ++KA + +EM+ G+ P V+TY T+I ++ E +
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P+L T+N I +A L G ++R G+ P +TYN+++ G+CR G
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
L+ A++ M+ + P+ Y +++
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMN 450
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N+VI G L+KA +V+ ++ K T+ LI+ ++ E L M
Sbjct: 270 TYNVVINGLARKGELEKA-AQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEM 328
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+G P + T+N I + A M+ G+ PD +TYN +I G+C++G+L
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNL 388
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + L P+ Y ++ C+ GD A ++ +++ P V T + L
Sbjct: 389 KEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTIL 448
Query: 368 LEGLKK 373
+ G +K
Sbjct: 449 MNGSRK 454
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I G ++ A + VEM+ +G+ PD+ITY +LI+ + K + L+
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ G P++ T+N+ + +A + M G +PD TY +++ G +
Sbjct: 397 DLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+L M ++ + ML + L P+ Y T I G + A+ + + + + T +
Sbjct: 457 NLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYN 516
Query: 366 ALLEGLKKNN 375
L+GL K+
Sbjct: 517 IFLDGLCKSG 526
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
EM GV P + ++ A + R + ++ M+ G P++ T+N + +
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 271 RSWQANKLMGLMQR--FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK- 327
R QA KL+ M+ G P +VTYN+VI G R G L+ A A L R+ ++K
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKA-----AQLVDRMRMSKKA 300
Query: 328 ---IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ +I G A + + + VP+V T + ++ G+ ++
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSG 351
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAGM+ A + GC + + A + L +++ ++ A LME I
Sbjct: 236 KAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVA-LMEKITANGCTPTI 294
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ C+MG L++A ++ ++ G PDV+TYT+LI K+ R L+
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 354
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G + + I+ L+ + QA+ + M G PD VT + +I G ++G
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +++ +M R L PN +Y +IH LC+ + A M K P T +
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474
Query: 367 LLEGLKKNNQ 376
L++GL K+
Sbjct: 475 LIDGLCKSGD 484
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 8/251 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFD 185
K G ++ A+D + GC V + + + L E R +A + F E+ + + D
Sbjct: 306 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF-KEMASR-GLALD 363
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +I+ + G + +A V M G PDV+T +T+I K R ++
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G PN ++ I L R+ A +++ M++ PD +TYN++I G C+SG
Sbjct: 424 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 483
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A+ + ML P+ Y +I LC+ G+ + A + D +V S
Sbjct: 484 DVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YS 538
Query: 366 ALLEGLKKNNQ 376
+L++GL K+ +
Sbjct: 539 SLVDGLCKSGK 549
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
+G ++K+ N L L +S + A V + FS I+I + G++
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFS--ILINGLVKAGMMI 241
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A+ + E G D+ TYT +++ K+ + + L + GC P +AT+N +
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R +A L+ + G PD VTY +I G + A K++ M R L
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ Y +I L Q G A + K VP V T+S +++GL K
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 11/252 (4%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFD-YIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIK 132
R + N+ + + L AR+ D +E L + +K+ + + I L K+G ++
Sbjct: 428 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC-KSGDVE 486
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A F +M GCK V + N + L ++ + A L ++ F ++ +
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR------FVYSSL 540
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C+ G L+ ++ EM++ GV + T T LI K NR + L+N + +G
Sbjct: 541 VDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG- 598
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ +N I L+ + + + M R+ +PD VTYN ++ G + +D A
Sbjct: 599 MPHPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHY 657
Query: 313 VYSAMLGRRLMP 324
Y M GR +P
Sbjct: 658 YYLEMTGRGYVP 669
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V++ N + +R+ + A + E+ E F + + + N+V+ C+ G + A +
Sbjct: 154 VETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKV-LAAMDH 212
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
E + + T++ LI+ K + L GC ++ T+ + L
Sbjct: 213 FEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKN 272
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++ +A LM + G P TYN ++ G C+ G L+ A + ++ P+ Y
Sbjct: 273 KKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++I L +E AY + K+ + +AL+ GL + + +A+++
Sbjct: 333 TSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSV 386
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 7/240 (2%)
Query: 144 YGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+G + +V + NA L V + R +A E+ F + D+ ++N++I +C
Sbjct: 113 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIF--RPDVETWNVLITGYCLAREP 170
Query: 203 DKAYLVMVEMQK-LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP-NLATFN 260
++A+ V+ EM++ GV P + T+ ++ K + + + + + P + ATF+
Sbjct: 171 EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK--VLAAMDHFEAVRRSMPVSAATFS 228
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ I LV QA+ L G D TY ++ ++ + A + +
Sbjct: 229 ILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITAN 288
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
P Y +++ LC+ G A + + + P V T ++L++GL K + +A
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 348
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G L++ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M+ + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A ++ EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD+ TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K G++P V+++ TL++ + K G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G +P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
SFN ++ + +G LD+ + + MQ GV+PDV TY+ LI+ K+++ + N L+N M
Sbjct: 173 SFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEM 232
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G PN TF I R A ++ M + PD +TYN +I G C+ G L
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+ + M + L P++ Y T+I C+EGD A+ K +K+N +AL
Sbjct: 293 KQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 368 LEGLKKNNQPCKANTIM 384
+ GL + + A ++
Sbjct: 353 ISGLCQEGRSVDAEKML 369
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G IK A F + +G + T S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD+VTY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + +M +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 409
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P +++ TL++ + + + G L N
Sbjct: 136 LYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 115/293 (39%), Gaps = 27/293 (9%)
Query: 9 RFCHTA----AAAAADAIALNNIR--AVSLNKFPNREPLVDKPLEPPALVKLKAERDPEK 62
RFC A + DAI +R AVS N N ++L D ++
Sbjct: 145 RFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMN------------GYIRLG---DLDE 189
Query: 63 LFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM 122
F+L K V + Y + ++ L + DY L L G +
Sbjct: 190 GFRL-KNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEM--LDNGLVPNGVTFTT 246
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ G K G + AM+ + M + + N + L + DLK Q + E+ K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D ++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R
Sbjct: 306 GLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ M+ G P + T+ + I K W +KLM MQR G P VT
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-REG 116
+DP L ++ + + + + +++ A+ +D IE ++ K + R E
Sbjct: 73 KDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEE 132
Query: 117 FIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
F +M +YG AG I A++ + M +GC + KS N L +L ++ I +
Sbjct: 133 FFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS 192
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGIL--------------------------------- 202
P K ++ D NI+IK CE G L
Sbjct: 193 AP-KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 203 --DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++A+ ++ M+K ++PD IT+ LIS K R E G L M KGC PN T+
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQ 311
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L++K+R+ +A ++M M +G+ P ++Y ++ G C + + V M+
Sbjct: 312 EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNH 371
Query: 321 RLMPNRKIYQTMIH 334
+P ++ ++
Sbjct: 372 GFVPKTLMWWKVVQ 385
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC+P+ +FN + LV+ + + +K+ + G+E D N++IKG C SG+L+ A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ ++ PN + +I C +G F A+ + + K+ P T + L+ G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 371 LKKNNQ 376
L+K +
Sbjct: 282 LRKKGR 287
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + D+ A L E+ K ++ +IF++N +I C+ G L++A M++M + G+KP
Sbjct: 470 LCKQGDVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
DV TYTT+I A + + + L M+ KG P + T+NV + R +L+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M I P+ TYN ++K +C ++ ++Y ML + ++PN Y +I C+
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ A + ++K + + + +AL+ L K +
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M + + G + A + F +M G + A + L + +LK + L E+ +K
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK- 419
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D ++ ++I +C++G + +A+LV +M + V P+V+TYT L K
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
N L + M KG N+ T+N I L QA + M M G++PD TY +I
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+S LD A + ML + + P Y +++ C G + + ++KN P+
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599
Query: 361 VDTISALLE 369
T ++L++
Sbjct: 600 TTTYNSLMK 608
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ +C + L+ A ++ EM G++ + + YT++I+ + + +
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G + A F + K A MQ+ G+ D VTY +I G CR+
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V M + L + Y +I C+ G A+++ ++K P+V T
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 365 SALLEGLKKNNQPCKANTIM 384
+AL +GL K C AN ++
Sbjct: 464 TALSDGLCKQGDVCAANELL 483
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + ++M G + + + N+ + L ++ +L+ ++++ E ++ D+
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA-GLKPDV 530
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I A C+ LD+A+ ++ EM G+KP ++TY L++ F R E G L
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ K PN T+N ++ ++ ++ M + P+E TYN++IKG C++ +
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+ A +S M+ + Y +I L ++ F A
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 13/249 (5%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
YG + +S NA L L +A+Q F E+PEK + S+NI++KA C G +
Sbjct: 220 YGISPSPESCNAVLCRLPLD---EAVQLF-QELPEK-----NTCSYNILLKALCTAGRIK 270
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A+ + EM PDV+TY ++ + + E L + M +G N + I
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L ++ + A +++ M G+ D + V+ GFCR G L A+ + M R L
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ Y +I+ LC+ G+ A + ++ K T + L++G K + +A +
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLV 447
Query: 384 M-ALVQRRV 391
+VQ+RV
Sbjct: 448 HNKMVQKRV 456
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 46/274 (16%)
Query: 128 AGMIKHAMDTFYDMH------LYG------CKRTVKSLNAALKVLTE--SRDLKAIQAFL 173
AG IK A F +M YG C T+ L A+K+L+E +R L
Sbjct: 266 AGRIKDAHQLFDEMASPPDVVTYGIMVHGYC--TLSELETAIKLLSEMAARGL------- 316
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ VI C+ G + A V+ +M GV D +TT++S F +
Sbjct: 317 ---------ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
++ M +G + T+ I L +A +++ M+ G++ D VT
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----NLAYIMC 349
Y ++I G+C+ G + A V++ M+ +R+ PN Y + LC++GD L + MC
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ N + T ++L+ GL CKA +
Sbjct: 488 SKGLELN----IFTYNSLINGL------CKAGNL 511
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-------- 233
+ D F V+ FC G L A EMQK G+ D +TYT LI+ +
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 234 ----------------------DNRPEIGNG-----LWNLMVCKGCFPNLATFNVRIQHL 266
D ++G + N MV K PN+ T+ L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ AN+L+ M G+E + TYN +I G C++G+L+ A + M L P+
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y T+I LCQ + + A+ + ++ + K P++ T + L+ G
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ AM T DM G K V + + L +S++L + L E+ +K I+ I
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTI 565
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ FC G ++ ++ M + + P+ TY +L+ + + + ++
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + PN T+N+ I+ R +A M G +YN +I+ +
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
A++++ M RL +Y I E + +C + ++ V S+
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM GC +V + N + L L L ++P + S+N ++ FC+
Sbjct: 177 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP-MHGCTPNSLSYNPLLHGFCKE 235
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY TL++A KD + ++ + N + KGC P L T+
Sbjct: 236 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 295
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ +A KL+ M+R G++PD +TY+ ++ G R G +D A K + + G
Sbjct: 296 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 355
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ PN Y +++ LC+ + A + K P+ T + L+EG+
Sbjct: 356 LGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 407
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 106/206 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N++I C+ G LD+A + M G +P+VIT+ ++ + R L
Sbjct: 116 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 175
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KGC P++ TFN+ I L + +A ++ M G P+ ++YN ++ GFC+
Sbjct: 176 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 235
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A + M+ R P+ Y T++ LC++G ++A + K P + T
Sbjct: 236 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 295
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ +++GL K + +A ++ ++R+
Sbjct: 296 NTVIDGLSKVGKTERAIKLLDEMRRK 321
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F + F+ ++ C+ + +A ++ EM+ G KPDV+TY LI+ K+ R +
Sbjct: 80 FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N M GC PN+ T N+ ++ + + R A KL+ M R G P VT+N++I CR
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G L A + M PN Y ++H C+E + A + + P + T
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 364 ISALLEGLKKNNQ 376
+ LL L K+ +
Sbjct: 260 YNTLLTALCKDGK 272
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
+ G++ A+D M ++GC S N L + + + +AI+ + V + D
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP--D 256
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N ++ A C+ G +D A ++ ++ G P +ITY T+I K + E L +
Sbjct: 257 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 316
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG P++ T++ + L + + +A K ++ GI P+ +TYN ++ G C+S
Sbjct: 317 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 376
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D A + M+ +R P Y +I + EG
Sbjct: 377 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 411
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 2/274 (0%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
+ Q P GF + ++G + AM +M G K V + N + + +
Sbjct: 71 INQQTLFPCFSLSGFSFYVQTTCKESG-VGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 129
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
L FL +P + Q ++ + NI++++ C G A ++ +M + G P V+
Sbjct: 130 EGRLDEAIKFLNNMPS-YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 188
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T+ LI+ + + M GC PN ++N + +++ +A + + +M
Sbjct: 189 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G PD VTYN ++ C+ G +D+A ++ + + + P Y T+I L + G
Sbjct: 249 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + + +K P + T S+L+ GL + +
Sbjct: 309 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 342
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + + N L L + + L ++ K + ++N VI ++G ++
Sbjct: 252 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK-GCSPVLITYNTVIDGLSKVGKTER 310
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ EM++ G+KPD+ITY++L+S ++ + + ++ + G PN T+N +
Sbjct: 311 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIML 370
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R++ +A + M +P E TY ++I+G G A + + + R L+
Sbjct: 371 GLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFD 185
K G + A++ + GC + + N + L++ + +AI+ L++ + ++ D
Sbjct: 269 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK--LLDEMRRKGLKPD 326
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I +++ ++ G +D+A +++ LG++P+ ITY +++ K + +
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 386
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
M+ K C P AT+ + I+ + + + +A L+ + G+
Sbjct: 387 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + D+ A L E+ K ++ +IF++N +I C+ G L++A M++M + G+KP
Sbjct: 470 LCKQGDVCAANELLHEMCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
DV TYTT+I A + + + L M+ KG P + T+NV + R +L+
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M I P+ TYN ++K +C ++ ++Y ML + ++PN Y +I C+
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ A + ++K + + + +AL+ L K +
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M + + G + A + F +M G + A + L + +LK + L E+ +K
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK- 419
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D ++ ++I +C++G + +A+LV +M + V P+V+TYT L K
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
N L + M KG N+ T+N I L QA + M M G++PD TY +I
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+S LD A + ML + + P Y +++ C G + + ++KN P+
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599
Query: 361 VDTISALLE 369
T ++L++
Sbjct: 600 TTTYNSLMK 608
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ +C + L+ A ++ EM G++ + + YT++I+ + + +
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G + A F + K A MQ+ G+ D VTY +I G CR+
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V M + L + Y +I C+ G A+++ ++K P+V T
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 365 SALLEGLKKNNQPCKANTIM 384
+AL +GL K C AN ++
Sbjct: 464 TALSDGLCKQGDVCAANELL 483
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 13/249 (5%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
YG + +S NA L L +A+Q F E+PEK + S+NI++KA C G +
Sbjct: 220 YGISPSPESCNAVLCRLPLD---EAVQLF-QELPEK-----NTCSYNILLKALCTAGRIK 270
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A+ + EM PDV+TY ++ + + E L + M +G N + I
Sbjct: 271 DAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L ++ + A +++ M G+ D + V+ GFCR G L A+ + M R L
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ Y +I+ LC+ G+ A + ++ K T + L++G K + +A +
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLV 447
Query: 384 M-ALVQRRV 391
+VQ+RV
Sbjct: 448 HNKMVQKRV 456
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 46/274 (16%)
Query: 128 AGMIKHAMDTFYDMH------LYG------CKRTVKSLNAALKVLTE--SRDLKAIQAFL 173
AG IK A F +M YG C T+ L A+K+L+E +R L
Sbjct: 266 AGRIKDAHQLFDEMASPPDVVTYGIMVHGYC--TLSELETAIKLLSEMAARGL------- 316
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ VI C+ G + A V+ +M GV D +TT++S F +
Sbjct: 317 ---------ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
++ M +G + T+ I L +A +++ M+ G++ D VT
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----NLAYIMC 349
Y ++I G+C+ G + A V++ M+ +R+ PN Y + LC++GD L + MC
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ N + T ++L+ GL CKA +
Sbjct: 488 SKGLELN----IFTYNSLINGL------CKAGNL 511
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-------- 233
+ D F V+ FC G L A EMQK G+ D +TYT LI+ +
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410
Query: 234 ----------------------DNRPEIGNG-----LWNLMVCKGCFPNLATFNVRIQHL 266
D ++G + N MV K PN+ T+ L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ AN+L+ M G+E + TYN +I G C++G+L+ A + M L P+
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y T+I LCQ + + A+ + ++ + K P++ T + L+ G
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 575
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ AM T DM G K V + + L +S++L + L E+ +K I+ I
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK-GIKPTI 565
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ FC G ++ ++ M + + P+ TY +L+ + + + ++
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ + PN T+N+ I+ R +A M G +YN +I+ +
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
A++++ M RL +Y I E + +C + ++ V S+
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSI 740
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + G A M++ A+ FY + C+ ++ N+ + +L + + E+ +
Sbjct: 132 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 191
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H D +++ +I AFC++G D A ++ EM+++G++P YT LI+ F+K N
Sbjct: 192 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M + C P++ T+ I+ L R +A MQR G PD V N +I
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-P 359
++G LD A K++ M R +P+ Y T+I L + + MK++ + P
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371
Query: 360 SVDTISALLEGLKKNNQPCKA 380
S T S L++G K N+ KA
Sbjct: 372 SSFTYSILIDGFCKTNRMEKA 392
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 24/316 (7%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG------FIMRIMMLYGKAGMIKHA 134
+ + + + L A R D H + +REG F+ ++ GKAG + A
Sbjct: 268 FTYTELIRGLGKAGRIDEAYHFF------CEMQREGCRPDTVFMNNMINFLGKAGRLDDA 321
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH------IQFDIFS 188
M F +M C +V + N +K L ES+ + EVP F I F+
Sbjct: 322 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRAS------EVPSWFERMKESGISPSSFT 375
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++I+I FC+ ++KA +++ EM + G P Y +LI A K R ++ L+ +
Sbjct: 376 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 435
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ + V I+HL R A + M + G PD YN ++ G R+G LD
Sbjct: 436 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 495
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A M +P+ Y +++ L + G + A M + + P V + + +L
Sbjct: 496 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 555
Query: 369 EGLKKNNQPCKANTIM 384
L +A+ +M
Sbjct: 556 GALSHAGMFEEASKLM 571
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 39/310 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G A+ +M G + T K + + + D + E+ ++ +
Sbjct: 207 FCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY-CRP 265
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++ +I+ + G +D+AY EMQ+ G +PD + +I+ K R + L+
Sbjct: 266 DVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLF 325
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C P++ T+N I+ L +K R+ + M+ GI P TY+++I GFC+
Sbjct: 326 QEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 385
Query: 304 SGHLDMAKKVYSAMLGRRLMP-----------------------------------NRKI 328
+ ++ A + M + P + ++
Sbjct: 386 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 445
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI +L + G + A M + K P V +AL+ GL + +A + M +Q
Sbjct: 446 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 505
Query: 389 RR--VPHFSS 396
+P +S
Sbjct: 506 EHGCIPDINS 515
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 38/226 (16%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFYD 140
A+ + L A+R+D L + K G + +M+ + GKAG + A++ F +
Sbjct: 410 AYCSLIDALGKAKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 468
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M+ GC P D++++N ++ G
Sbjct: 469 MNKLGC-----------------------------AP-------DVYAYNALMSGLARTG 492
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+LD+A M MQ+ G PD+ +Y +++ K P + + M P++ ++N
Sbjct: 493 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYN 552
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ L + +A+KLM M G E D +TY+ +++ + H
Sbjct: 553 TVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
+ GM+ A+ T M +GC + S N L L ++ L + + ++ D
Sbjct: 489 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS-TVRPD 547
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ S+N V+ A G+ ++A +M EM LG + D+ITY++++ A K + G
Sbjct: 548 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHEYTDQG 604
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLD 308
+ C P +N I L+++ + + ++L M G PD VTY+ +I FC+ G D
Sbjct: 155 RKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRD 214
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ + M + P KIY +I + D + A + ++ + P V T + L+
Sbjct: 215 SAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELI 274
Query: 369 EGLKKNNQPCKANTIMALVQRR 390
GL K + +A +QR
Sbjct: 275 RGLGKAGRIDEAYHFFCEMQRE 296
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 37/203 (18%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ D ++NI+I FC L +AY ++ EM+++G++PDV TY TL+S K
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCK--------- 435
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
G F + ++L+G M G +P +T+ ++ G+C
Sbjct: 436 -------AGDFAAV-------------------DELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS-V 361
+ G +D A ++ +M + PN IY T+I +LC+ GD +LA I D MK+ VP+ V
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLA-IELFDEMKEKSVPANV 528
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
T +ALL+GL+ N P KA +M
Sbjct: 529 TTFNALLKGLRDKNMPEKAFELM 551
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ L L RD+ + + ++ D+ ++ I++ C+ G + A V+
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195
Query: 210 VEM--QKLGVKPDVITYTTLISAFYKDNRPEIGNGL--WNLMVCKGCFPNLATFNVRIQH 265
M Q L ++PDV+T T++ K R + + GC PN T+N I
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDA 255
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
A +L+ M+ G+ + VT N ++ G CR+G A + + R + P
Sbjct: 256 FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREK--RTVWPE 313
Query: 326 RK----IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
K Y T++ L + +A + + M + P ++ GL +
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F+FN ++ A + + + MQ V+PDV+TY L++ K R +G+ L
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGR--VGDAL 192
Query: 244 WNLMVCKGCF-------PNLATFNVRIQHLVNKRRSWQANKLMGLMQRF----GIEPDEV 292
V G P++ T N + L R +A L + QR G P+ V
Sbjct: 193 R---VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA--LAFVEQRMSSVHGCPPNTV 247
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
TYN +I FCR G++ MA ++ M + N T++ LC+ G
Sbjct: 248 TYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I D+F++N +I FC G A ++ EM + + PDV+TY LI+
Sbjct: 275 QNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + L++ M+ +G PN T++ I + R A + LM G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +T+N +I G+C + +D ++ M L+ + Y T+IH GD N A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + P + T LL+GL N + A + ++Q+
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SFNI+IK FC L A ++ KLG+ PDV+T+TTL+ ++R
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
++ M C PN+ TF + L + R +A L+ M G++P ++TY +
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G L++ +K+ ++PN IY +I LC++G + A + +
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEV---SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T ++++ G + + A ++ +++R++
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 7/209 (3%)
Query: 175 EVPEKFHIQFD------IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
E + FH F+ + +F ++ C G + +A ++ M + G++P ITY T++
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 229 SAFYK-DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
K + N L + PN+ ++ I L R A L MQ GI
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD TYN +I GFC SG A+++ ML R++ P+ Y +I+ +EG F A
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + + + +P+ T S++++G K N+
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM--I 131
R +I N + + R D EH+ + +G I ++ G G I
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRI 411
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
M+ ++M G + N + DL A L E+ + DI + +
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDT 470
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T++ I L + R +A ++ M P+ VT+ +I G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ N Y T+I + G+ N A + ++ + P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 361 VDTISALLEGL 371
TI +L GL
Sbjct: 651 TITIRNMLTGL 661
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 5/193 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P V+ + L+ + RP++ L+ M K
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +FN+ I+ + + A G + + G+ PD VT+ ++ G C + A
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + M+ P+ T +++G+ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 374 NNQPCKANTIMAL 386
K +T+ AL
Sbjct: 232 -----KGDTVSAL 239
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ M+ P++ F + +V R L M+R
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++N++IK FC L A + + L P+ + T++H LC E + A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ P+V T + L+ GL + + +A +AL+ R
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDR 209
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + + K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M+ G P+ T++V I L + + AN+L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G +D+A ++Y ML + L+P+ Y T+I+ LC++GD A + + + K P
Sbjct: 257 HCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPD 316
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K
Sbjct: 317 KITYTTLIDGCCKEGD 332
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D ++++++I C+ +D A + EM G+ P+ +T+TTLI K
Sbjct: 202 AMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QAN L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQR 415
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ ++L+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 104/191 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G L +
Sbjct: 123 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 182
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 183 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYT 302
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 303 TLIDGCCKEGD 313
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M GV+PDV TY
Sbjct: 138 DIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY 196
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN TF I R A ++ M
Sbjct: 197 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 256
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I C+EGD +
Sbjct: 257 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDS 316
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A ++
Sbjct: 317 AFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKML 356
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 182
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 183 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M ++PD++TY
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYT 302
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 303 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNV 362
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 363 GLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQR 396
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 240 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK-ELKPDK 298
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 299 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 358
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 359 MLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +M + +AG+ + ++ F M +G +V + N+ L +L + + E+
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ + D F+FNI+I+ FC G++D + + ++ + G +PDV+TY TL+ + +
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 237 PEIGNGLWNLMVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ + M K PN+ T+ I+ KR +A + M G++ + +TY
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
N +IKG C + + K + G P+ + T++H C G+ + A + +
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ P T SAL+ L + KA ++ L++R++
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIKAFCEMGIL 202
G T +S + L++L +R L + FL + ++ ++ + FN +++ F G+
Sbjct: 106 GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLF 165
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNV 261
++ V M+ GV P V+T+ +L++ K R + +++ M+ G P+ TFN+
Sbjct: 166 QESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I+ ++ + RFG EPD VTYN ++ G CR+G + +A V M G++
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGM-GKK 284
Query: 322 ---LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
L PN Y T+I C + + A + ++ + + + T + L++GL
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGL 337
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 51/286 (17%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ A+ F +M G K + N +K L E+R + I+ L D +FN
Sbjct: 308 IEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFN 367
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN----- 245
++ C G LD A V M +L ++PD TY+ L+ + + E L +
Sbjct: 368 TLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLER 427
Query: 246 --LMVCKGCFPNLATFNVRIQHLVNKRRSWQANK-------------------------- 277
L+ GC P +A +N ++L ++ +A K
Sbjct: 428 KILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKE 487
Query: 278 --------LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD---MAKKVYSAMLGRRLMPNR 326
L+ LM R PD TY +I G H+D +A + ML PN
Sbjct: 488 GTFESGYELLVLMLRKDFLPDFETYESLINGLL---HMDKPLLALQSLEKMLRSSHRPNS 544
Query: 327 KIYQTMIHYLCQEG----DFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ +++ L ++G +L +M ++++N S + L
Sbjct: 545 STFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLF 590
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I D+F++N +I FC G A ++ EM + + PDV+TY LI+
Sbjct: 275 QNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + L++ M+ +G PN T++ I + R A + LM G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +T+N +I G+C + +D ++ M L+ + Y T+IH GD N A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + P + T LL+GL N + A + ++Q+
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SF I+IK FC L A ++ KLG+ PDV+T+ TL+ ++R
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M C PN+ TF + L + R +A L+ M G++P ++TY +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G L++ +K+ ++PN IY +I LC++G + A + +
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEV---SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T ++++ G + + A ++ +++R++
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 14/250 (5%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD------IF 187
A+ TF + G V + N L L ++ + E FH F+ +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGL-------CVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-DNRPEIGNGLWNL 246
+F ++ C G + +A ++ M + G++P ITY T++ K + N L +
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
PN+ ++ I L R A L MQ GI PD TYN +I GFC SG
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A+++ ML R++ P+ Y +I+ +EG F A + + + + +P+ T S+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365
Query: 367 LLEGLKKNNQ 376
+++G K N+
Sbjct: 366 MIDGFCKQNR 375
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM--I 131
R +I N + + R D EH+ + +G I ++ G G I
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRI 411
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
M+ ++M G + N + DL A L E+ + DI + +
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDT 470
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T++ I L + R +A ++ M P+ VT+ +I G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ N Y T+I + G+ N A + ++ + P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 361 VDTISALLEGL 371
TI +L GL
Sbjct: 651 TITIRNMLTGL 661
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P V+ + L+ + RP++ L+ M K
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +F + I+ + + A G + + G+ PD VT+N ++ G C + A +
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + M+ P+ T +++G+ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 374 NNQPCKANTIMAL 386
K +T+ AL
Sbjct: 232 -----KGDTVSAL 239
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ M+ P++ F + +V R L M+R
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++ ++IK FC L A + + L P+ + T++H LC E + A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P+V T + L+ GL + + +A +AL+ R
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDR 209
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 102 LLEHQKSLPQGRR-EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KV 159
LLE+ +P+ EG++ L G+ GM++ D F + G + S N L
Sbjct: 119 LLEYPDFVPKNDSLEGYVR----LLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLAC 174
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L R + + + + + D+ + +IKAFC + Y ++ ++ + G+
Sbjct: 175 LKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCV 234
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D + LI+ F K + + + + ++M+ C P++ T+ I L+ +R++ +A ++
Sbjct: 235 DNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVF 294
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
++ G PD V Y VIKGFC G L A+K++ M+ + L+PN Y MI+ C+
Sbjct: 295 NDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKV 354
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
DF A + D + + +V + S ++ GL + + +A ++ + R+
Sbjct: 355 RDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRK 405
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 104/222 (46%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N++I +C++ +A + +M G +V++Y+T+IS Y + + L++
Sbjct: 342 YTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHE 401
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG +L ++N I+ L + +A L+ + G+EP ++ +IK C+ G
Sbjct: 402 MSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGD 461
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ M R L P + MI L ++GDF + P++ T
Sbjct: 462 TEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEH 521
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
L++ LK+ N+ ++ L+ R +++ + + SK
Sbjct: 522 LIDCLKRENRLDDILIVLDLMFREGYRLEKSRICSLVTKFSK 563
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 1/249 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G++ A +++M G + N + + RD + ++ + + + ++ S
Sbjct: 320 GLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAE-NVVS 378
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I G D+A + EM + G+ D+I+Y +LI ++ L N ++
Sbjct: 379 YSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLL 438
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G P++++F I+ L + A +L+ M +EP T++ +I G + G
Sbjct: 439 IQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFA 498
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ ML +L PN + ++ +I L +E + I+ ++ + I +L+
Sbjct: 499 QGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLEKSRICSLV 558
Query: 369 EGLKKNNQP 377
K N P
Sbjct: 559 TKFSKKNFP 567
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I D+F++N +I FC G A ++ EM + + PDV+TY LI+
Sbjct: 275 QNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + L++ M+ +G PN T++ I + R A + LM G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +T+N +I G+C + +D ++ M L+ + Y T+IH GD N A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + P + T LL+GL N + A + ++Q+
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 114/219 (52%), Gaps = 8/219 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SFNI+IK FC L A ++ KLG+ PDV+T+TTL+ ++R
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M C PN+ TF + L + R +A L+ M G++P ++TY +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G L++ +K+ ++PN IY +I LC++G + A + +
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEV---SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T ++++ G + + A ++ +++R++
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 180 FHIQFD------IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
FH F+ + +F ++ C G + +A ++ M + G++P ITY T++ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 234 -DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ N L + PN+ ++ I L R A L MQ GI PD
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN +I GFC SG A+++ ML R++ P+ Y +I+ +EG F A + +
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ + +P+ T S++++G K N+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNR 375
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM--I 131
R +I N + + R D EH+ + +G I ++ G G I
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRI 411
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
M+ ++M G + N + DL A L E+ + DI + +
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDT 470
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T++ I L + R +A ++ M P+ VT+ +I G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ N Y T+I + G+ N A + ++ + P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 361 VDTISALLEGL 371
TI +L GL
Sbjct: 651 TITIRNMLTGL 661
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P V+ + L+ + RP++ L+ M K
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +FN+ I+ + + A G + + G+ PD VT+ ++ G C + A +
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + M+ P+ T +++G+ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 374 NNQPCKANTIMAL 386
K +T+ AL
Sbjct: 232 -----KGDTVSAL 239
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ M+ P++ F + +V R L M+R
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++N++IK FC L A + + L P+ + T++H LC E + A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P+V T + L+ GL + + +A +AL+ R
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDR 209
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + L A R++ E L+ QK P F M I L K G+++ A++
Sbjct: 136 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT-FNMLISFLCRK-GLVEPALE 193
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ YGC S N L + + + AFL ++ DI S+N ++ A
Sbjct: 194 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL-DLMVSRGCYPDIVSYNTLLTAL 252
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + + L N MV KG P++
Sbjct: 253 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 312
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ L + R A + G +Q GI P+ V YN +I G C+ A +++
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEG 340
M+G MPN Y +I L EG
Sbjct: 373 MIGNGCMPNESTYTILIEGLAYEG 396
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 4/295 (1%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
A+ V+ GA + D L+ P ++R L G+ G +A+ +M
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIR--GLCGR-GRTANALAVLDEM 58
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
C V + L+ + K L E+ +K DI ++N+V+ C+ G
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEGR 117
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A + + G +P+ ++Y ++ R E L M KGC PN+ TFN+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L K A +++ + ++G P+ ++YN ++ FC+ +D A M+ R
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
P+ Y T++ LC+ G+ ++A + K P + + + +++GL K +
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 131/276 (47%), Gaps = 4/276 (1%)
Query: 99 IEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
++ +E K+LP G + ++L G A + A + +M GC V + N
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L ++ L ++P K+ + S+N ++ AFC+ +DKA + M
Sbjct: 178 LISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PD+++Y TL++A + ++ L + + KGC P L ++N I L ++ +A
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M G++PD +TY+ + G CR ++ A + + + + PN +Y +I
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ + + A + + +P+ T + L+EGL
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA + + L A + + E+P ++ D +++N +I+ C G A V+ EM
Sbjct: 4 NAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+ PDV+TYT L+ A K + + L + M KGC P++ T+NV + + + R
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A + + + +G EP+ V+YN+V+KG C + + A+++ M + PN + +I
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+LC++G A + + K P+ + + LL K + KA + L+ R
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K AM +M GC + + N + + E R AI+ FL +P + + + S+N
Sbjct: 84 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE-FLKNLP-SYGCEPNTVSYN 141
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IV+K C + A +M EM + G P+V+T+ LIS + E + +
Sbjct: 142 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 201
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN ++N + +++ +A + LM G PD V+YN ++ CRSG +D+A
Sbjct: 202 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 261
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + + P Y T+I L + G A + + + K P + T S + G
Sbjct: 262 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 321
Query: 371 LKKNNQ 376
L + ++
Sbjct: 322 LCREDR 327
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + S N L L S ++ L ++ +K + S+N VI + G +
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYNTVIDGLTKAGKTKE 295
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ EM G++PD+ITY+T+ + +++R E + + G PN +N I
Sbjct: 296 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
L +R + A L M G P+E TY ++I+G G + A+ + + R
Sbjct: 356 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G + A++ + + GC + S N + LT++ K L E+ K +Q DI
Sbjct: 254 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDI 312
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ + C ++ A ++Q +G++P+ + Y +I K L+
Sbjct: 313 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 372
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-LMQRFGIE 288
M+ GC PN +T+ + I+ L + +A L+ L R G E
Sbjct: 373 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEE 415
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+ YN ++ G+C +G LD A+++ + M + P+ Y T+I LC G A + +
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 352 SMKKNWVPSVDTISALLEGLKK 373
+++ VP V T + LLE K
Sbjct: 58 MLRRRCVPDVVTYTILLEATCK 79
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 99 IEHLLE----------HQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
IEHL++ +++SL G F +M + K G I+ A F + +G
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGL 167
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ +V S N + + DL + F L + +Q D+++++++I C+ ++ A
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLD--EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDA 225
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ EM G+ P+ +T+TTLI K+ R ++ ++ M+ + P+L T+N I
Sbjct: 226 NELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K QA L M G++PD++TY +I G C+ GHL+ A + M+ + +
Sbjct: 286 LCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLD 345
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
Y +I LCQEG A M ++ + P + T + ++ K + ++
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405
Query: 386 LVQR 389
+QR
Sbjct: 406 EMQR 409
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
EK I+ D++++N + C + + +A ++ M + GV P+ +TYTTLIS K+
Sbjct: 334 EKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDM 393
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L+ M KG P++ T+NV + + K +A + M++ G+ PD TY +
Sbjct: 394 VEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASL 453
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C +G +D+A K++ M R PN Y +I L +EG A+ + D +K
Sbjct: 454 VHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGL 513
Query: 358 VPSVDTISALLEGLKKNNQ 376
P SAL+ L +N+
Sbjct: 514 TPDDSLYSALVGSLHTDNR 532
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 1/294 (0%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
V L+ A +E +++ K+ ++ Y +AG ++ A + F + G
Sbjct: 209 VDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGI 268
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+ ++ + + ++A + L ++ + + + FN +I +C G++D A
Sbjct: 269 EPNERTYGVLINGFCKIGQMEAAEMLLADMQGR-GVGHNQIIFNTMIDGYCRQGMVDNAL 327
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V M+K+G++ DV TY TL + NR L ++M+ KG PN T+ I
Sbjct: 328 KVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIH 387
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A +L M G P VTYN+++ G+ + G + A++ M + L+P+
Sbjct: 388 CKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDV 447
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
Y +++H C G ++A + ++ + P+V +AL+ GL K + +A
Sbjct: 448 YTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEA 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++V+ FC+ G +D A ++ EM + GV+ + + Y +L+ + + L +
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G + T+ + + L + ++ M+ + D Y VI +CR+G+
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+ A +V+ +G + PN + Y +I+ C+ G A ++ D
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLAD 297
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N+++ + + G + +A EM+K G+ PDV TY +L+ + + ++ L+
Sbjct: 412 VVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFE 471
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G PN+ + I L + RS +A +L M + G+ PD+ Y+ ++
Sbjct: 472 EMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL---- 527
Query: 306 HLDMAKKVY 314
H D K ++
Sbjct: 528 HTDNRKDIH 536
>gi|91806015|gb|ABE65736.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 360
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 38/314 (12%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S +A +FD + L E ++L I H + T+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLG--------------------ISHNLYTYSIFI 117
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
Y C+R+ SL AL +L + K I + N ++ FC +
Sbjct: 118 NYFCRRSQLSL--ALAILGKMM--------------KLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A ++ +M ++G +PD +T+TTL+ ++ N+ L MV KGC P+L T+
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + A L+ M++ IE D V YN +I G C+ H+D A +++ M + +
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P+ Y +I LC G ++ A + D ++KN P + +AL++ K + +A
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 383 IM-ALVQRRV-PHF 394
+ +V+R + P F
Sbjct: 342 LYDEMVKRSIDPSF 355
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + +M K P ++ ++ L+SA K N+ ++ L M G NL T+++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + + A ++G M + G P VT N ++ GFC + A + M+
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
P+ + T++H L Q + A + + + K P + T A++ GL K +P
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ ++ TY+ I+ F + ++ + +
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG 134
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T N + + R +A L+ M G +PD VT+ ++ G +
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M+ + P+ Y +I+ LC+ G+ +LA + K V +
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 366 ALLEGLKK 373
+++GL K
Sbjct: 255 TIIDGLCK 262
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + GC+ + + A + L + R + L+ EK I+ D+ +N +I C+
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCK-RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+D A+ + +M+ G+KPDV TY LIS R + L + M+ K P+L FN
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
I V + + +A KL M + I+P V
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSFV 356
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 113/212 (53%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
EK I+ D++++NI+I C++ +AYL++ M+++ + PD +Y TLI F+ + +
Sbjct: 291 EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKI 350
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ ++N M+ + P++AT+ I R+ +A +++ MQ G+ P E+TY+ +
Sbjct: 351 NLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSAL 410
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+C+ L A + + R + NR +Y +I CQ G+ + A + K +
Sbjct: 411 LNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGI 470
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P V T SAL+ G+ K + I++ +Q+
Sbjct: 471 DPDVITYSALINGMCKMGMIHETKEILSRMQK 502
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ +I +C G D+A V+ EMQ GV+P +TY+ L++ + K ++ L
Sbjct: 369 VATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIK 428
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ + N + + I +A +++ M GI+PD +TY+ +I G C+ G
Sbjct: 429 YLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMG 488
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ K++ S M ++PN +Y T++ Y C+ G
Sbjct: 489 MIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAG 523
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 36/256 (14%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + KAG K A+ F D++ G NA L + + F + +
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQF-KQYMSRM 573
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I FD+ SFN +I ++C+ G + +A+ V M + G PD+ TY +L+
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG---------- 623
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+C+G HLV QA + M + DE T N ++ G
Sbjct: 624 -------LCQG------------GHLV------QAKEFMVYLLEKACAIDEKTLNTLLVG 658
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G LD A + M+ R ++P+ Y ++ C+ G A I+ + ++K VP
Sbjct: 659 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPD 718
Query: 361 VDTISALLEGLKKNNQ 376
+ LL GL Q
Sbjct: 719 TIAYTCLLNGLVNEGQ 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE--- 238
I D+ +++ +I C+MG++ + ++ MQK GV P+ + YTTL+ F K +
Sbjct: 470 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 529
Query: 239 -----------IGNG-LWNLMVC----KGCFP----------------NLATFNVRIQHL 266
+ N + N ++C +G ++A+FN I
Sbjct: 530 KYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 589
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A + M R G PD TY +++G C+ GHL AK+ +L + +
Sbjct: 590 CQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDE 649
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
K T++ +C+ G + A +C+ + +N +P T + LL+G K +
Sbjct: 650 KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 699
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+NI++ + + G L + + +M K G+KPD +TY LI + EI M
Sbjct: 792 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 851
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL----------------MQRFGIEPDE 291
V +G FP+ F++ I+ K + A +L M+ G+ P E
Sbjct: 852 VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSE 911
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE----GDFNLAYI 347
V + +++G C+ G ++ A V+S+++ ++P + T++H LC+E F+L +
Sbjct: 912 VAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQL 971
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
M +K + V T + L+ GL C A
Sbjct: 972 MESCGLKVDVV----TYNVLITGLCNKKCICDA 1000
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 37/264 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A + M G K ++ S N L L + + FL E ++
Sbjct: 170 YVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR-KFPL 228
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + NIV+ + C G L KA ++ +M+
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKN------------------------------ 258
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
C+ PN T+N + V K R A +++ M++ GIE D TYN++I C+
Sbjct: 259 ----CR--LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
A + M L P+ Y T+IH EG NLA + ++++ PSV T
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372
Query: 365 SALLEGLKKNNQPCKANTIMALVQ 388
+AL++G +N + +A ++ +Q
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQ 396
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 1/278 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G A Y+M + G + + + +A L + L + + + I
Sbjct: 379 YCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSR-SISI 437
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ + I+I FC++G + KA ++ M G+ PDVITY+ LI+ K +
Sbjct: 438 NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEIL 497
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G PN + + + + +A K + R G+ + V +N ++ F R
Sbjct: 498 SRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYRE 557
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ M ++ + + +I CQ G+ A+ + + ++ W P + T
Sbjct: 558 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
+LL GL + +A M + + L+
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 655
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 31/263 (11%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y K G + + + DM K +K N ++L + L+E+ KF
Sbjct: 796 LMHGYIKKGQLSRTLYLYRDM----VKEGIKPDNVTYRLLI----FGLCEYGLIEIAVKF 847
Query: 181 HIQF-------DIFSFNIVIKAFCE----------------MGILDKAYLVMVEMQKLGV 217
+ D +F+I+IKAF E +G +D A+ + +M+ LGV
Sbjct: 848 LEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGV 907
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
P + ++++ K + E +++ ++ G P +ATF + L + + A
Sbjct: 908 VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFH 967
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L LM+ G++ D VTYN++I G C + A +Y M + L+PN Y T+ +
Sbjct: 968 LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 1027
Query: 338 QEGDFNLAYIMCKDSMKKNWVPS 360
G + KD + VPS
Sbjct: 1028 ATGTMQDGEKLLKDIEDRGIVPS 1050
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 52/257 (20%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ I++ FC+ G + A +++ M + G+ PD I YT L++ + + + + ++
Sbjct: 683 DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 742
Query: 245 NLMVCK-----GC-------------------------------FPNLATFNVRIQHLVN 268
++CK C +P+ A++N+ + +
Sbjct: 743 QEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIK 802
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
K + + L M + GI+PD VTY L+I G C G +++A K M+ + P+
Sbjct: 803 KGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLA 862
Query: 329 YQTMI----------------HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ +I Y+ GD + A+ + +D VPS S+++ GL
Sbjct: 863 FDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 922
Query: 373 KNNQPCKANTIMALVQR 389
K + +A + + + R
Sbjct: 923 KCGKVEEAIIVFSSIMR 939
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
+ L+ + V ++ A ++ D+KA+ EV E + +++ C+ G
Sbjct: 880 LQLFSYMKWVGDIDGAFEL---KEDMKALGVVPSEVAE-----------SSIVRGLCKCG 925
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+++A +V + + G+ P + T+TTL+ K+ + + L LM G ++ T+N
Sbjct: 926 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 985
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
V I L NK+ A L M+ G+ P+ TY + +G + +K+ + R
Sbjct: 986 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045
Query: 321 RLMPNRK 327
++P+ K
Sbjct: 1046 GIVPSYK 1052
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I D+F++N +I FC G A ++ EM + + PDV+TY LI+
Sbjct: 275 QNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + L++ M+ +G PN T++ I + R A + LM G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +T+N +I G+C + +D ++ M L+ + Y T+IH GD N A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + P + T LL+GL N + A + ++Q+
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SF I+IK FC L A ++ KLG+ PDV+T+ TL+ ++R
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M C PN+ TF + L + R +A L+ M G++P ++TY +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G L++ +K+ ++PN IY +I LC++G + A + +
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEV---SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T ++++ G + + A ++ +++R++
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 14/250 (5%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD------IF 187
A+ TF + G V + N L L ++ + E FH F+ +
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGL-------CVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-DNRPEIGNGLWNL 246
+F ++ C G + +A ++ M + G++P ITY T++ K + N L +
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
PN+ ++ I L R A L MQ GI PD TYN +I GFC SG
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A+++ ML R++ P+ Y +I+ +EG F A + + + + +P+ T S+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365
Query: 367 LLEGLKKNNQ 376
+++G K N+
Sbjct: 366 MIDGFCKQNR 375
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM--I 131
R +I N + + R D EH+ + +G I ++ G G I
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRI 411
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
M+ ++M G + N + DL A L E+ + DI + +
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDT 470
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T++ I L + R +A ++ M P+ VT+ +I G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ N Y T+I + G+ N A + ++ + P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 361 VDTISALLEGL 371
TI +L GL
Sbjct: 651 TITIRNMLTGL 661
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P V+ + L+ + RP++ L+ M K
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +F + I+ + + A G + + G+ PD VT+N ++ G C + A +
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + M+ P+ T +++G+ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Query: 374 NNQPCKANTIMAL 386
K +T+ AL
Sbjct: 232 -----KGDTVSAL 239
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ M+ P++ F + +V R L M+R
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++ ++IK FC L A + + L P+ + T++H LC E + A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P+V T + L+ GL + + +A +AL+ R
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDR 209
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I D+F++N +I FC G A ++ EM + + PDV+TY LI+
Sbjct: 275 QNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + L++ M+ +G PN T++ I + R A + LM G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
+ +T+N +I G+C + +D ++ M L+ + Y T+IH GD N A +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + P + T LL+GL N + A + ++Q+
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 21/307 (6%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
+++ DTVS L R+ + I H++ + I+ K G A
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVV---------IYSAIIDSLCKDGRHSDAQ 275
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ F +M G + + N+ + S + L E+ E+ I D+ ++N +I A
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER-KISPDVVTYNALINA 334
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
F + G +A + EM G+ P+ ITY+++I F K NR + ++ LM KGC PN
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
L TFN I +R +L+ M G+ D TYN +I GF G L+ A +
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK----------NWV-PSVDTI 364
M+ L P+ T++ LC G A M K K N V P V T
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 365 SALLEGL 371
+ L+ GL
Sbjct: 515 NILISGL 521
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SF I+IK FC L A ++ KLG+ PDV+T+ TL+ ++R
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M C PN+ TF + L + R +A L+ M G++P ++TY +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 298 IKGFCRSGH----LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+ G C+ G LD+ +K+ ++PN IY +I LC++G + A + +
Sbjct: 226 VDGMCKIGDTVSALDLLRKMEEI---SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+K P + T ++++ G + + A ++ +++R++
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A++ F+ M C+ V + + L E R ++A+ A L + E +Q ++
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV-ALLDRMMED-GLQPTQITY 222
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ C++G A ++ +M+++ + P+V+ Y+ +I + KD R L+ M
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG FP+L T+N I + R A +L+ M I PD VTYN +I F + G
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+++Y ML R ++PN Y +MI C++ + A M K P++ T + L+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 369 EG 370
+G
Sbjct: 403 DG 404
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 24/255 (9%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD------IF 187
A+ TF + G V + N L L ++ + E FH F+ +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGL-------CVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F ++ C G + +A ++ M + G++P ITY T++ K IG+ + L
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK-----IGDTVSALD 240
Query: 248 VCKG------CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + PN+ ++ I L R A L MQ GI PD TYN +I GF
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C SG A+++ ML R++ P+ Y +I+ +EG F A + + + + +P+
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 362 DTISALLEGLKKNNQ 376
T S++++G K N+
Sbjct: 361 ITYSSMIDGFCKQNR 375
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 74 RIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM--I 131
R +I N + + R D EH+ + +G I ++ G G I
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT--KGCSPNLITFNTLIDGYCGAKRI 411
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
M+ ++M G + N + DL A L E+ + DI + +
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDT 470
Query: 192 VIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYKDNRPEIG 240
++ C+ G L A + MQK GV+PDV TY LIS + +
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G P+ T++ I L + R +A ++ M P+ VT+ +I G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G +D +++ M R ++ N Y T+I + G+ N A + ++ + P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 361 VDTISALLEGL 371
TI +L GL
Sbjct: 651 TITIRNMLTGL 661
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%)
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
F E+ L+ A + +M + P V+ + L+ + RP++ L+ M K
Sbjct: 52 SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ +F + I+ + + A G + + G+ PD VT+N ++ G C + A +
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M PN + T+++ LC+EG A + M+ P+ T +++G+ K
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L S F++ E L++ M+ P++ F + +V R L M+R
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++ ++IK FC L A + + L P+ + T++H LC E + A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P+V T + L+ GL + + +A +AL+ R
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA---VALLDR 209
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 62/329 (18%)
Query: 122 MMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+ML G GM + A F M +++S N + L S L L E+ EK
Sbjct: 302 LMLEGFCSEGMFEEARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+I+ +++S+NI++ C+ G+ A ++ M++ GV PD +TY+TL+ + + +
Sbjct: 361 -NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILE 419
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
N + M+ GCFPN+ T N+ + L + R+ +A L+ +M G D VT N +I
Sbjct: 420 ANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMIN 479
Query: 300 GFCRSGHLDMAKKVYSAML-----------------------GRRLMPNRKIYQTMIHYL 336
G C++G+LD A ++ S M G++ +P+ Y T+I L
Sbjct: 480 GLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGL 539
Query: 337 -----------------------------------CQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G + A+ + K+ KK S+
Sbjct: 540 CKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSL 599
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
T ++L++GL NQ + +M ++ R
Sbjct: 600 RTYNSLIQGLGSENQIFEIYGLMDEMKER 628
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++FN++I A CEMG L+ A V +M + G KP+ + L+ + + G L +
Sbjct: 154 YTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE 213
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN +N I L + ++ +A KL+ M+ G+ PD VT+N I C+SG
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273
Query: 307 LDMAKKVYSAMLGRRLM----PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ A +++ M M PN Y M+ C EG F A + DSMK + S+
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLSLR 332
Query: 363 TISALLEGLKKNNQPCKANTIM 384
+ + + GL ++ + +A+ I+
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLIL 354
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQ 183
Y +AG+ H +D +M G + N + L E + ++A + L+E + +
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEK--LVEKMREVGLS 255
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQ---KLGV-KPDVITYTTLISAFYKDNRPEI 239
DI +FN I A C+ G + +A + +MQ ++G+ KP+ +TY ++ F + E
Sbjct: 256 PDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEE 315
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+++ M +L ++N+ + LV + +A+ ++ M I+P+ +YN+++
Sbjct: 316 ARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVH 374
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C+ G A+ + M + P+ Y T++H C+ G A + ++ ++ P
Sbjct: 375 GLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFP 434
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ T + LL L K + +A ++ ++ R
Sbjct: 435 NMYTCNILLHSLWKEGRASEAEDLLQMMNER 465
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C++G +D+A ++EM + PD + + T I + K + +
Sbjct: 528 DSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL 587
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC +L T+N IQ L ++ + ++ LM M+ GI P+ TYN +I
Sbjct: 588 KEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEG 647
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G L A + ML + + PN ++ +I + DF A
Sbjct: 648 GKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAA 688
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 95/216 (43%), Gaps = 2/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A +M GC +++++ N+ ++ L + I + E+ E+ I
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKER-GIFP 632
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++N +I E G L A ++ EM + G+ P++ T+ LI AF+K L+
Sbjct: 633 NVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + C + ++ L+ + +A +L + Y +I+ C+
Sbjct: 693 EIALSL-CGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKD 751
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD A + M+ ++ + + +I L + G
Sbjct: 752 GKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 99/267 (37%), Gaps = 24/267 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G I A +M GC + + N L L + + L + E+ +
Sbjct: 411 YCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGY-GL 469
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-----------------------PDV 221
D + N +I C+ G LDKA ++ M G PD
Sbjct: 470 DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDS 529
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
ITY T+I K R + M+ K P+ F+ I + + + A +++
Sbjct: 530 ITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKE 589
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G TYN +I+G + + M R + PN Y +I L + G
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + ++K P++ T L+
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTFRILI 676
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G HA + F +MH G V + + + S + L ++ E+ I D+
Sbjct: 88 KDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER-QINPDV 146
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+ +I A + G + +A + +M + G+ P ITY ++I F K +R + +
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M K C P++ TF+ I +R ++ M R GI + VTY +I GFC+ G
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
LD A+ + + M+ + PN +Q+M+ LC + + A+ + +D K P +
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRI 321
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ M K V NA + L + Q E+ +K I D+
Sbjct: 53 KMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK-GIFPDV 111
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I +FC G A ++ +M + + PDV+T++ LI+A K+ + ++
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G FP T+N I + R A +++ M PD VT++ +I G+C++
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D +++ M R ++ N Y T+IH CQ GD + A + + P+ T +
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+L L + KA I+ +Q+
Sbjct: 292 MLASLCSKKELRKAFAILEDLQK 314
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 145 GCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ V + + L E R L+A+ A + + E+ H + +I C+MG +
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQAL-ALVDRMVEEGH-----QPYGTIINGLCKMGDTE 58
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ +M++ +K V+ Y +I KD L+ M KG FP++ T++ I
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
R A +L+ M I PD VT++ +I + G + A+++Y ML R +
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P Y +MI C++ N A M K+ P V T S L+ G K + I
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 384 MALVQRR 390
+ RR
Sbjct: 239 FCEMHRR 245
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G +PDV+T+TTL++ + R L + MV +G P + I L
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ A L+ M+ I+ V YN +I C+ GH A+ +++ M + + P+ Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
MI C+ G + A + +D +++ P V T SAL+ L K + +A I + RR
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 2/256 (0%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F R++ L +K + M ++G K V + N +K L + L+ L ++
Sbjct: 156 FYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P + + D +F V++ + E G LD A + +M + G ++ ++ F K+ R
Sbjct: 216 P-SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 237 PEIG-NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
E N + + G FP+ TFN + L A ++M +M + G +PD TYN
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
VI G C+ G + A +V M+ R PN Y T+I LC+E A + + K
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 356 NWVPSVDTISALLEGL 371
+P V T ++L++GL
Sbjct: 395 GILPDVCTFNSLIQGL 410
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ ++ L +R+ + E+ K + D F++N++I + C G LD+A ++
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M+ G VITY TLI F K N+ +++ M G N T+N I L
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
RR A +LM M G +PD+ TYN ++ FCR G + A + AM P+ Y
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 330 QTMIHYLCQEGDFNLA 345
T+I LC+ G +A
Sbjct: 579 GTLISGLCKAGRVEVA 594
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N VI C++G + +A V+ +M P+ +TY TLIS K+N+ E L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG P++ TFN IQ L R A +L M+ G EPDE TYN++I C
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G LD A + M + Y T+I C+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 7/330 (2%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+++ D +LF + +E+ + RL + FD ++ +LE KS
Sbjct: 54 LDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR 113
Query: 111 QGRREGFIMRIMMLYGKAGM---IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+ ++ Y + + I +D D +G K N L +L + LK
Sbjct: 114 CEMGTSTFLILIESYAQFELQDEILSVVDWMIDE--FGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
++ ++ + I+ D+ +FN++IKA C L A L++ +M G+ PD T+TT+
Sbjct: 172 LVEISHAKM-SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-NKLMGLMQRFG 286
+ + ++ + + MV GC + + NV + + R A N + + + G
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD+ T+N ++ G C++GH+ A ++ ML P+ Y ++I LC+ G+ A
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + ++ P+ T + L+ L K NQ
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 5/271 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ M C + N + L + ++ L V I D+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDV 400
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I+ C A + EM+ G +PD TY LI + + + +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC ++ T+N I ++ +A ++ M+ G+ + VTYN +I G C+S
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ M+ P++ Y +++ + C+ GD A + + P + T
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 367 LLEGLKKNNQPCKANTIMALVQRR----VPH 393
L+ GL K + A+ ++ +Q + PH
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ F +M GC+ + N + L L L ++ E + ++N +I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLI 477
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC+ +A + EM+ GV + +TY TLI K R E L + M+ +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + H +A ++ M G EPD VTY +I G C++G +++A K+
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 314 YSA--MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS--ALLE 369
+ M G L P+ Y +I L ++ A + ++ +++N P D +S +
Sbjct: 598 LRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP-DAVSYRIVFR 654
Query: 370 GLKKNNQPCK--ANTIMALVQRR-VPHFSS 396
GL P + + ++ L+++ VP FSS
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 2/246 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A+ DM YG K+ ++ E DL ++ E F +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE-FGCSWSN 259
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQ-KLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S N+++ FC+ G ++ A + EM + G PD T+ TL++ K + + +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M+ +G P++ T+N I L +A +++ M P+ VTYN +I C+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A ++ + + ++P+ + ++I LC + +A + ++ K P T +
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 366 ALLEGL 371
L++ L
Sbjct: 440 MLIDSL 445
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A F M GC+ V + + + L + R + + K I +I
Sbjct: 22 KIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNI 80
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N +I+ C +A ++ EM L + P+++T++ LI+ F K+ G+
Sbjct: 81 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 140
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ T++ + + ++A KL +M G +PD +YN++I G+C++
Sbjct: 141 MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 200
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ AK++++ M+ + L P+ Y T+I LCQ G A+ + K+ + +P + T S
Sbjct: 201 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 260
Query: 367 LLEGLKKNNQPCKA 380
LL+G K KA
Sbjct: 261 LLDGFCKQGYLAKA 274
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ +I C++G A + +M + G +PDV+TY+T+I + KD R
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ M KG PN+ T+N IQ L N R +A+ ++ M I P+ VT++L+I FC
Sbjct: 67 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G++ A+ V M + PN Y ++++ + + A + + K P V
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186
Query: 363 TISALLEGLKKNNQPCKANTI 383
+ + L+ G CKA I
Sbjct: 187 SYNILINGY------CKAKRI 201
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 8/191 (4%)
Query: 145 GCKRTVKSLNAALKVLTESRDLK--AIQAFLMEVPEKFHIQF------DIFSFNIVIKAF 196
G +T+ + V+T S + ++QA + E + F + D+FS+NI+I +
Sbjct: 136 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGY 195
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ + +A + EM G+ PD+++Y TLI + R + L+ M+ G P+L
Sbjct: 196 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 255
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+++ + + +A +L MQ ++P+ V YN++I C+S +L A+K++S
Sbjct: 256 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 315
Query: 317 MLGRRLMPNRK 327
+ + L PN K
Sbjct: 316 LFVQGLQPNMK 326
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G +PDV TYTT+I+ K GL+ M GC P++ T++ I L RR +A
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+ M+ GI P+ TYN +I+G C A + + M+ +MPN + +I+
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
C+EG+ A + K + P+V T S+L+ G
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 159
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +G P++ T+ I L + A L M G +PD VTY+ +I C+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++S M + + PN Y ++I LC + A M + M N +P++ T S
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 367 LL 368
L+
Sbjct: 121 LI 122
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F +M + +AG+ + ++ F M +G +V + N+ L +L + + E+
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ + D F+FNI+I+ FC G++D + + ++ + G +PDV+TY TL+ + +
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 237 PEIGNGLWNLMVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ + M K PN+ T+ I+ KR +A + M G++ + +TY
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
N +IKG C + + K + G P+ + T++H C G+ + A + +
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+ P T SAL+ L + KA ++ L++R++
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIKAFCEMGIL 202
G T +S + L++L +R L + FL + ++ ++ + FN +++ F G+
Sbjct: 106 GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLF 165
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNV 261
++ V M+ GV P V+T+ +L++ K R + +++ M+ G P+ TFN+
Sbjct: 166 QESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I+ ++ + RFG EPD VTYN ++ G CR+G + +A V M G++
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGM-GKK 284
Query: 322 ---LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
L PN Y T+I C + + A + ++ + + + T + L++GL
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGL 337
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 51/286 (17%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ A+ F +M G K + N +K L E+R + I+ L D +FN
Sbjct: 308 IEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFN 367
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN----- 245
++ C G LD A V M +L ++PD TY+ L+ + + E L +
Sbjct: 368 TLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLER 427
Query: 246 --LMVCKGCFPNLATFNVRIQHLVNKRRSWQANK-------------------------- 277
L+ GC P +A +N ++L ++ +A K
Sbjct: 428 KILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKE 487
Query: 278 --------LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD---MAKKVYSAMLGRRLMPNR 326
L+ LM R PD TY +I G H+D +A + ML PN
Sbjct: 488 GTFESGYELLVLMLRKDFXPDFETYESLINGLL---HMDKPLLALQSLEKMLRSSHRPNS 544
Query: 327 KIYQTMIHYLCQEG----DFNLAYIMCKDSMKKNWVPSVDTISALL 368
+ +++ L ++G +L +M ++++N S + L
Sbjct: 545 STFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLF 590
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K ++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C+ +AY ++ EM G PD+ TYTTLI+ F K + + ++ +
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGH 306
V +G P++ T++ I L + R +A L G M + G P+ VTYN +I GFCR G
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + M P+ Y T+++ C+ + AY + +K P V T ++
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L++GL + N+ A I+ ++R+
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRK 320
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 170/384 (44%), Gaps = 51/384 (13%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
KAER E + L + ++ I + + + ++ +++ D + L ++ + +G R
Sbjct: 127 KAERASEA-YDLLEEMVYSG-CIPDIFTYTTLITGFCKSKKSD--DALRVFEQLVARGFR 182
Query: 115 EGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQA 171
+ ++ G K G +K A+D F M G C + N+ + +
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L + E D+ ++ ++ FC++ LD AY ++ +M + G+ PDV+T+T+L+
Sbjct: 243 LLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 232 YKDNR-----------------PEIGNGLWNLMV---CKG---------------CFPNL 256
++NR P + +N ++ C+ C PN+
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYT--YNTILDGYCRANQLEEARKFMLEEMDCPPNV 359
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+FN+ I+ L RS +A +L+ +R PD V Y VI G CR +D A +VY
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
ML +PN Y T+I LC G + A + ++K VP++ T + L++ +K N
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKAN 475
Query: 376 QPCKANTIM-ALVQRRVPHFSSNQ 398
+ A ++ +VQR S+Q
Sbjct: 476 RDEDARELLDDMVQRGFGGVQSHQ 499
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + A + L L + FL E+ + ++ ++ ++ ++I C+ G +D+A ++
Sbjct: 46 VYTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALL 104
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M+K V P +TY +LIS K R L MV GC P++ T+ I
Sbjct: 105 SKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKS 163
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKI 328
++S A ++ + G PD VTY+ +I G C+ G L A ++ M+ MPN
Sbjct: 164 KKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT 223
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Y ++I C+ G + A + + + P V T + L+ G K
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 268
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-------- 236
D ++ +I+ C++ L++A + + +M G PDV TYT +I A +NR
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 237 PEIGNG-------LWNLMV---CKG----------------CFPNLATFNVRIQHLVNKR 270
E+ N + +++ CKG C P T+N I L
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAE 129
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R+ +A L+ M G PD TY +I GFC+S D A +V+ ++ R P+ Y
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I LC+EG A + +K + +P+ T ++L+ G + K + M L++R
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG---KMDEAMNLLER 246
Query: 390 RVPHFSSNQLSAFKSILS 407
SS + + ++++
Sbjct: 247 MAETGSSPDVVTYTTLMN 264
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C + T+ IQ L +R QA +G M G PD TY VI C L A+
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K M R L PN Y +I LC+ G + A + M+K VP+ T ++L+ GL
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL-LSKMRKKCVPTAVTYNSLISGL 125
Query: 372 KKNNQPCKA 380
K + +A
Sbjct: 126 CKAERASEA 134
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C+ +AY ++ EM G PD+ TYTTLI+ F K + + ++ +
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGH 306
V +G P++ T++ I L + R +A L G M + G P+ VTYN +I GFCR G
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + M P+ Y T+++ C+ + AY + +K P V T ++
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L++GL + N+ A I+ ++R+
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRK 320
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 51/384 (13%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
KAER E + L + ++ I + + + ++ +++ D + L ++ + +G R
Sbjct: 127 KAERASEA-YDLLEEMVYSG-CIPDIFTYTTLITGFCKSKKSD--DALRVFEQLVARGFR 182
Query: 115 EGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQA 171
+ ++ G K G +K A+D F M G C + N+ + +
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L + E D+ ++ ++ FC++ LD AY ++ +M + G+ PDV+T+T+L+
Sbjct: 243 LLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Query: 232 YKDNR-----------------PEIGNGLWNLMV---CKG---------------CFPNL 256
++NR P + +N ++ C+ C PN+
Sbjct: 302 CRENRLSDAVHILGEMRRKSCSPTVYT--YNTILDGYCRANQLEEARKFMLEEMDCPPNV 359
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+FN+ I+ L RS +A +L+ +R PD V Y VI G CR +D A +VY
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
ML +PN Y T++ LC G + A + ++K VP++ T + L++ +K N
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKAN 475
Query: 376 QPCKANTIM-ALVQRRVPHFSSNQ 398
+ A ++ +VQR S+Q
Sbjct: 476 RDEDARELLDDMVQRGFGVVQSHQ 499
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + A + L L + FL E+ + ++ ++ ++ ++I C+ G +D+A ++
Sbjct: 46 VYTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALL 104
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M+K V P +TY +LIS K R L MV GC P++ T+ I
Sbjct: 105 SKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKS 163
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKI 328
++S A ++ + G PD VTY+ +I G C+ G L A ++ M+ MPN
Sbjct: 164 KKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT 223
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Y ++I C+ G + A + + + P V T + L+ G K
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 268
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-------- 236
D ++ +I+ C++ L++A + + +M G PDV TYT +I A +NR
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 237 PEIGNG-------LWNLMV---CKG----------------CFPNLATFNVRIQHLVNKR 270
E+ N + +++ CKG C P T+N I L
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAE 129
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R+ +A L+ M G PD TY +I GFC+S D A +V+ ++ R P+ Y
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I LC+EG A + +K + +P+ T ++L+ G + K + M L++R
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG---KMDEAMNLLER 246
Query: 390 RVPHFSSNQLSAFKSILS 407
SS + + ++++
Sbjct: 247 MAETGSSPDVVTYTTLMN 264
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C + T+ IQ L +R QA +G M G PD TY VI C L A+
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K M R L PN Y +I LC+ G + A + M+K VP+ T ++L+ GL
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL-LSKMRKKCVPTAVTYNSLISGL 125
Query: 372 KKNNQPCKA 380
K + +A
Sbjct: 126 CKAERASEA 134
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS--------- 229
K + D++SF IVIK CE G ++K++ ++VE+++ G P+V+ YTTLI
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 230 --------------------------AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+K+ + G ++ M G FPNL T+N +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R+ A K+ M+ G+ + VTYN +I G CR + A +V M +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN Y T+I C A +C+D + PS+ T + L+ G K A +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 384 MALVQRR 390
+ ++ R
Sbjct: 396 VKEMEER 402
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFD 185
K G K A F +M G + + N + L R++KA +A +M+ + I +
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC--REMKANEANEVMDQMKSDGINPN 337
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I FC + L KA + +++ G+ P ++TY L+S F K +
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G P+ T+ + I +A +L M+ G+ PD TY+++I GFC G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A +++ +M+ ++ PN IY TM+ C+EG A + ++ +K P+V +
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517
Query: 366 ALLEGLKKNNQPCKANTIM 384
++E L K + +A ++
Sbjct: 518 YMIEVLCKERKSKEAEGLV 536
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-D 185
K G I+ A D F++M +G + + L ++ K Q F M + H F +
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK--QGFEMYEKMQEHGVFPN 267
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N V+ C+ G A+ V EM++ GV +++TY TLI ++ + N + +
Sbjct: 268 LHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMD 327
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PNL T+N I R+ +A L ++ G+ P VTYN+++ GFC+ G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTI 364
A KV M R + P++ Y +I + + A I + SM++ P V T
Sbjct: 388 DTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKA-IQLRSSMEELGLTPDVHTY 446
Query: 365 SALLEGL 371
S L+ G
Sbjct: 447 SVLIHGF 453
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 126/254 (49%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG I+ + D ++ +G V + + +++ + E+ KF + +
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG-KFGLVANE 233
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++I + GI + + + +MQ+ GV P++ TY +++ KD R + +++
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDE 293
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N+ T+N I L + ++ +AN++M M+ GI P+ +TYN +I GFC
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A + + R L P+ Y ++ C++GD + A + K+ ++ PS T +
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413
Query: 367 LLEGLKKNNQPCKA 380
L++ +++ KA
Sbjct: 414 LIDTFARSDNMEKA 427
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 15/267 (5%)
Query: 68 KANAHNRIVIE--------NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM 119
KAN N ++ + N + + G R+ L KS +G +
Sbjct: 318 KANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKS--RGLSPSLVT 375
Query: 120 RIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEV 176
+++ G K G A +M G K + + + S ++ KAIQ L
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ--LRSS 433
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E+ + D+ +++++I FC G +++A + M + +P+ + Y T++ + K+
Sbjct: 434 MEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS 493
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
L+ M K PN+A++ I+ L +R+S +A L+ M GI P + NL
Sbjct: 494 SYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNL 553
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + S M ++ ++M+ LM
Sbjct: 554 ISRAKNDSHSRSMDEEEPASMVFDGLM 580
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 100/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K ++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 4/289 (1%)
Query: 54 LKAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
+KAE+D K +F + + + F +SRL +F E +LE K
Sbjct: 22 IKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKC 81
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
E + I YG+ A+ F+ M + + T K+ L +L E +K
Sbjct: 82 MVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIG 141
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
F E+ E I + S NI+IKA C+ +D A + EM G +PD TY TLI+
Sbjct: 142 FYREMRE-LGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLING 200
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ L+ M KG ++ T+ I L +A L+ M+R IEP+
Sbjct: 201 LCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPN 260
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TY+ ++ G C+ GH A ++ M + +PN Y T+I+ LC+E
Sbjct: 261 VFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKE 309
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V +M+ ++P Y T++ ++N + G + M G ++ + N+ I+
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163
Query: 265 HLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L NK A ++ M G +PD TY +I G CR G++ AK+++ M +
Sbjct: 164 ALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFS 223
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ Y ++IH LCQ + + A + ++ + + P+V T S+L++GL K +A +
Sbjct: 224 ASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQL 283
Query: 384 MALVQRR 390
+ ++ ++
Sbjct: 284 LEVMDKK 290
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 113/252 (44%), Gaps = 8/252 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A + F +M G +V + + + L +S +L L E+ ++ I+ ++
Sbjct: 203 RLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEM-KRNDIEPNV 261
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ ++ C+ G +A ++ M K P+++TY+TLI+ K+ + + +
Sbjct: 262 FTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDR 321
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY-------NLVIK 299
M +G PN + I L +A + M GI P+ ++ N+V++
Sbjct: 322 MRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQ 381
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C + A ++Y +M R + + ++ C+ GD + A + ++ + +P
Sbjct: 382 GLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIP 441
Query: 360 SVDTISALLEGL 371
+ ++ GL
Sbjct: 442 DEGVWNVVIGGL 453
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 104/192 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++ FNI++ FC++G + A +V E+ + G++P V+++ TLIS + + E G L
Sbjct: 225 NVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLK 284
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++M + P++ T++ I L + R +AN L M G+ P+ VT+ +I G C+
Sbjct: 285 SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKH 344
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D+A + + M R + P+ Y +I+ LC++GD A + + + + P T
Sbjct: 345 GKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITF 404
Query: 365 SALLEGLKKNNQ 376
+ L++G K+
Sbjct: 405 TTLMDGCCKDGD 416
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 135/275 (49%), Gaps = 5/275 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME-VPEK 179
+M + K G + +A F ++ G + +V S N + S++++ + F+++ V E
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE--EGFVLKSVMES 289
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I D+F+++ +I C+ +++A + EM ++G+ P+ +T+TTLI K + ++
Sbjct: 290 ERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDL 349
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ +M +G P+L T+N I L +A KL+ M G +PD++T+ ++
Sbjct: 350 ALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMD 409
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C+ G +D A ++ M+ + + + +I LC++G A M KD + P
Sbjct: 410 GCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKP 469
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQR--RVP 392
T + +++ K ++ +QR RVP
Sbjct: 470 DDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVP 504
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I A+ F M G + + + NA + L DLK + L E+ + D
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN-GFKPDK 401
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F ++ C+ G +D A + M + G++ D + +T LIS +D R +
Sbjct: 402 ITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKD 461
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+ + I K KL+ MQR G P VTYN ++ GFC+ G
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQ 521
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ AK + AML ++PN + ++ C+ G
Sbjct: 522 MKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ ++N +I C G L +A ++ EM G KPD IT+TTL+ KD +
Sbjct: 362 IRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSAL 421
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + MV +G + F I L R A +++ M G +PD+ TY +VI F
Sbjct: 422 EIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCF 481
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G + M K+ M +P Y +++ C++G A ++ + VP+
Sbjct: 482 CKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPND 541
Query: 362 DTISALLEG 370
T + LL+G
Sbjct: 542 ITFNILLDG 550
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ FN+ + A + + R G+ P V++N +I G+CRS +++ +
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
S M R+ P+ Y +I+ LC+E A + + + VP+ T + L++G K
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343
Query: 374 NNQ 376
+ +
Sbjct: 344 HGK 346
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+G P+ +N+++ GFC+ G + A+ V+ + R L P+ + T+I C+ +
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEE 279
Query: 345 AYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQPCKANTI 383
+++ K M+ + P V T SAL+ GL K ++ +AN +
Sbjct: 280 GFVL-KSVMESERISPDVFTYSALINGLCKESRVEEANGL 318
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + L A R++ E L+ QK P F M I L K G+++ A++
Sbjct: 264 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT-FNMLISFLCRK-GLVEPALE 321
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ YGC S N L + + + AFL ++ DI S+N ++ A
Sbjct: 322 VLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL-DLMVSRGCYPDIVSYNTLLTAL 380
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + + L N MV KG P++
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 440
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ L + R A + G +Q GI P+ V YN +I G C+ A +++
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 500
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEG 340
M+G MPN Y +I L EG
Sbjct: 501 MIGNGCMPNESTYTILIEGLAYEG 524
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 131/276 (47%), Gaps = 4/276 (1%)
Query: 99 IEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
++ +E K+LP G + ++L G A + A + +M GC V + N
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L ++ L ++P K+ + S+N ++ AFC+ +DKA + M
Sbjct: 306 LISFLCRKGLVEPALEVLEQIP-KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PD+++Y TL++A + ++ L + + KGC P L ++N I L ++ +A
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M G++PD +TY+ + G CR ++ A + + + + PN +Y +I
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 484
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ + + A + + +P+ T + L+EGL
Sbjct: 485 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 16/231 (6%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
CKR+ A+K+L E RD DI ++N+V+ C+ G +D A
Sbjct: 206 CKRS--GYKQAMKLLDEMRDKGCTP--------------DIVTYNVVVNGICQEGRVDDA 249
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ + G +P+ ++Y ++ R E L M KGC PN+ TFN+ I
Sbjct: 250 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 309
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K A +++ + ++G P+ ++YN ++ FC+ +D A M+ R P+
Sbjct: 310 LCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 369
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y T++ LC+ G+ ++A + K P + + + +++GL K +
Sbjct: 370 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K AM +M GC + + N + + E R AI+ FL +P + + + S+N
Sbjct: 212 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE-FLKNLP-SYGCEPNTVSYN 269
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IV+K C + A +M EM + G P+V+T+ LIS + E + +
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN ++N + +++ +A + LM G PD V+YN ++ CRSG +D+A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + + P Y T+I L + G A + + + K P + T S + G
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449
Query: 371 LKKNNQ 376
L + ++
Sbjct: 450 LCREDR 455
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L C V + NA + + + A + + E ++ D ++ + +I+ C G
Sbjct: 121 LAACGPDVMAYNAMMAGYCGAGQVDAARRWCAE----RAVERDAYTCDTLIRGLCGRGRT 176
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A V+ EM + PDV+TYT L+ A K + + L + M KGC P++ T+NV
Sbjct: 177 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 236
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ + + R A + + + +G EP+ V+YN+V+KG C + + A+++ M +
Sbjct: 237 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 296
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN + +I +LC++G A + + K P+ + + LL K + KA
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA 356
Query: 383 IMALVQRR 390
+ L+ R
Sbjct: 357 FLDLMVSR 364
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+++A C+ +A ++ EM+ G PD++TY +++ ++ R +
Sbjct: 194 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 253
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ GC PN ++N+ ++ L R A +LMG M + G P+ VT+N++I CR
Sbjct: 254 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A +V + PN Y ++H C++ + A + + P + +
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373
Query: 365 SALLEGLKKNNQ 376
+ LL L ++ +
Sbjct: 374 NTLLTALCRSGE 385
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 2/184 (1%)
Query: 138 FYDMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F D+ + GC + S N L L S ++ L ++ +K + S+N VI
Sbjct: 357 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYNTVIDGL 415
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G +A ++ EM G++PD+ITY+T+ + +++R E + + G PN
Sbjct: 416 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 475
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+N I L +R + A L M G P+E TY ++I+G G + A+ +
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535
Query: 317 MLGR 320
+ R
Sbjct: 536 LCSR 539
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G + A++ + + GC + S N + LT++ K L E+ K +Q DI
Sbjct: 382 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDI 440
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ + C ++ A ++Q +G++P+ + Y +I K L+
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 500
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
M+ GC PN +T+ + I+ L + +A L+
Sbjct: 501 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 533
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T I+ L R+ +A +++ PD + YN ++ G+C +G +D A++
Sbjct: 96 PDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAGQVDAARRW 150
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ R + + T+I LC G A + + +++ VP V T + LLE K
Sbjct: 151 CAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207
Query: 374 NN 375
+
Sbjct: 208 RS 209
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 59/300 (19%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+++S N + L S L L E+ EK +I+ +++S+NI++ C+ G+ A +
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEK-NIKPNLYSYNILVHGLCKYGMFSDARSI 388
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ M++ GV PD +TY+TL+ + + + N + M+ GCFPN+ T N+ + L
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML---------- 318
+ R+ +A L+ +M G D VT N +I G C++G+LD A ++ S M
Sbjct: 449 EGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNL 508
Query: 319 -------------GRRLMPNRKIYQTMIHYL----------------------------- 336
G++ +P+ Y T+I L
Sbjct: 509 GNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFD 568
Query: 337 ------CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C++G + A+ + K+ KK S+ T ++L++GL NQ + +M ++ R
Sbjct: 569 TFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKER 628
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++FN++I A CEMG L+ A V +M + G KP+ + L+ + + G L +
Sbjct: 154 YTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE 213
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN +N I L + ++ +A KL+ M+ G+ PD VT+N I C+SG
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273
Query: 307 LDMAKKVYSAMLGRRLM----PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ A +++ M M PN Y M+ C EG F A + DSMK + S+
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLSLR 332
Query: 363 TISALLEGLKKNNQPCKANTIM 384
+ + + GL ++ + +A+ I+
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLIL 354
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQ 183
Y +AG+ H +D +M G + N + L E + ++A + L+E + +
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEK--LVEKMREVGLS 255
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQ---KLGV-KPDVITYTTLISAFYKDNRPEI 239
DI +FN I A C+ G + +A + +MQ ++G+ KP+ +TY ++ F + E
Sbjct: 256 PDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEE 315
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+++ M +L ++N+ + LV + +A+ ++ M I+P+ +YN+++
Sbjct: 316 ARAIFDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVH 374
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G C+ G A+ + M + P+ Y T++H C+ G A + ++ ++ P
Sbjct: 375 GLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFP 434
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ T + LL L K + +A ++ ++ R
Sbjct: 435 NMYTCNILLHSLWKEGRASEAEDLLQMMNER 465
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +I C++G +D+A ++EM + PD + + T I + K + +
Sbjct: 528 DSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL 587
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC +L T+N IQ L ++ + ++ LM M+ GI P+ TYN +I
Sbjct: 588 KEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEG 647
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G L A + ML + + PN ++ +I + DF A
Sbjct: 648 GKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAA 688
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 95/216 (43%), Gaps = 2/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A +M GC +++++ N+ ++ L + I + E+ E+ I
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKER-GIFP 632
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+++++N +I E G L A ++ EM + G+ P++ T+ LI AF+K L+
Sbjct: 633 NVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF 692
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + C + ++ L+ + +A +L + Y +I+ C+
Sbjct: 693 EIALSL-CGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKD 751
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD A + M+ ++ + + +I L + G
Sbjct: 752 GKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + Y L K++R + L+ M P TFN+ I L A ++
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M G +P+E + ++++G+CR+G + M +PNR Y T+I LC
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
EG A + + + P + T + + L K+ Q +A+ I +Q
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQ 285
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 99/267 (37%), Gaps = 24/267 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G I A +M GC + + N L L + + L + E+ +
Sbjct: 411 YCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGY-GL 469
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-----------------------PDV 221
D + N +I C+ G LDKA ++ M G PD
Sbjct: 470 DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDS 529
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
ITY T+I K R + M+ K P+ F+ I + + + A +++
Sbjct: 530 ITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKE 589
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G TYN +I+G + + M R + PN Y +I L + G
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + ++K P++ T L+
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTFRILI 676
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTF 138
+A+ +S A + + +L+ KS +G + +M+ + G + A++ F
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKS--RGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
++ C+ TV + ++ + L E+ K ++ D ++N +I+ C+
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK-GLEPDTLTYNAIIRGMCK 255
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
++DKA+ ++ + G KPD+ITY L+ + G L + M+ GC PN+ T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
++ I L + +A L+ M+ G++PD Y+ +I GFCR G LD+A + M+
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+P+ Y T++ LC+ G + A + + + P+V + + L L
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++NI+I +FC G LD A + E+ K +P VITYT LI A D ++ L
Sbjct: 172 DVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLL 231
Query: 245 NLMVCKG-----------------------------------CFPNLATFNVRIQHLVNK 269
+ M+ KG C P++ T+N+ ++ L+++
Sbjct: 232 DEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSR 291
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + KL+ M G +P+ VT++++I CR G ++ A + +M + L P+ Y
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+I C+EG +LA + + +P + + ++ GL + + +A
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA 402
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K M+ A + + GCK + + N L+ L + + E+ + ++
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI-SIGCKPNV 313
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +I+I C G +++A ++ M++ G+KPD Y LI+ F ++ R ++
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC P++ +N + L ++ QA ++ + G P+ +YN + SG
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A ++ +L + + P+ Y ++I LC++G + A + D + P+V + +
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
+L GL K N+ A ++A + +
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEK 517
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 5/234 (2%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQA--FLMEVPEKFHIQFDIFSFNIVIKAFC 197
+M GCK V + ++ + T RD K +A L + EK ++ D + ++ +I FC
Sbjct: 303 EMISIGCKPNV--VTHSILIGTLCRDGKVEEAVNLLRSMKEK-GLKPDAYCYDPLIAGFC 359
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
G LD A + M G PD++ Y T+++ + + + ++ + GC PN++
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
++N L + ++A +++ + GI+PDE+TYN +I CR G +D A ++ M
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R PN Y ++ LC+ N A + +K P+ T L+EG+
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 1/204 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ E++ + D+F++N +I F + L+ A V+ M+ G PDV+TY +I +F
Sbjct: 126 VMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFC 184
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ ++ ++ C P + T+ + I+ + A KL+ M G+EPD +
Sbjct: 185 SRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTL 244
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN +I+G C+ +D A ++ ++ R P+ Y ++ L G ++ + +
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ P+V T S L+ L ++ +
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGK 328
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +IK F + KA VM +++ G KPDV Y LIS F K N+ E N +
Sbjct: 103 DVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVL 161
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P++ T+N+ I ++ + A ++ + + EP +TY ++I+
Sbjct: 162 DRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILD 221
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D+A K+ ML + L P+ Y +I +C+E + A+ + + + P + T
Sbjct: 222 GGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITY 281
Query: 365 SALLEGL 371
+ LL L
Sbjct: 282 NILLRTL 288
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC-KGCFPN 255
C G +++ + M G PDVI T LI F+ N IG + + + P+
Sbjct: 80 CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFF--NSRNIGKATRVMEILERYGKPD 137
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ +N I + + AN+++ M+ G PD VTYN++I FC G LD+A +++
Sbjct: 138 VFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFE 197
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+L P Y +I +G ++A + + + K P T +A++ G+ K
Sbjct: 198 ELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--- 181
+ + G + A + M GC + + N + L R KA QA +EV EK
Sbjct: 358 FCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLC--RTGKADQA--LEVFEKLDEVG 413
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ S+N + A G +A +++++ G+ PD ITY +LIS +D +
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M PN+ ++N+ + L R+ A +++ M G +P+E TY L+I+G
Sbjct: 474 ELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533
Query: 302 CRSG 305
SG
Sbjct: 534 GFSG 537
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 7/215 (3%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L+++T++ DL +ME+ EK + + +FN +I A+ G L+K + V+ +MQ+ G
Sbjct: 239 LEMVTKAEDL------VMEM-EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 291
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+K DVI++ +++ AF K+ + + + M+ K PN +N I + + QA
Sbjct: 292 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 351
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L+ M+ G+ VTYNL++KG CRS +D A+++ + + L P+ Y T+I
Sbjct: 352 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 411
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
C +GD + A + ++ K P++ T L+ L
Sbjct: 412 CNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K M+ A D +M G +V++ N + + L+ L ++ +K I+ D+
Sbjct: 238 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKSDV 296
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
SF V+KAFC+ G + +A ++ +M V P+ Y ++I A+ + E L
Sbjct: 297 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 356
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G ++ T+N+ ++ L + +A +L+ ++ G+ PD V+YN +I C G
Sbjct: 357 MKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 416
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
D A ++ M + P + Y T++ L G + + + + KN PS
Sbjct: 417 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPS 470
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 98/196 (50%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I +C++ L A+ + +M+ ++PD ITY LI+ K L M
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ TFN I + + ++ MQ+ GI+ D +++ V+K FC++G +
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M+ + + PN ++Y ++I + GD A+++ + S+ T + LL
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373
Query: 369 EGLKKNNQPCKANTIM 384
+GL +++Q +A ++
Sbjct: 374 KGLCRSSQIDEAEELI 389
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG ++ DM G K V S + +K ++ + A L ++ K +
Sbjct: 271 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK-DVAP 329
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +N +I A+ E G ++A+L++ +M+ GV ++TY L+ + ++ + L
Sbjct: 330 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G P++ ++N I NK + +A +L+ M ++GI P TY+ ++ +
Sbjct: 390 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
G + + +Y ML + + P+ IY M+ AY+ C++ K
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVD----------AYVRCENDSK 489
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+N+VI G A V EM +GV P+ ITY T+I K E G L
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+ M+ G PN+ T+NV + L R + LM M + PD TY
Sbjct: 75 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134
Query: 295 -------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++++ G C+ G + A++V ++ L+P IY
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I+ CQ D A+ + + ++ P T +AL+ GL K KA ++ +++
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N+++ C G +D+ ++M EM + PD TY+ L + L+
Sbjct: 85 NIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLF 144
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG T ++ + L + +A +++ ++ G+ P V YN +I G+C+
Sbjct: 145 AESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQV 204
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M R + P+ Y +I+ LC+ A + + K PSV+T
Sbjct: 205 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 264
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++ Q K T+++ +Q++
Sbjct: 265 NTLIDAYGTAGQLEKCFTVLSDMQQK 290
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PD +Y +I+ ++ + +++ MV G PN T+N I V +L
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M G +P+ VTYN+++ G CR+G +D + + M + P+ Y + L +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
G+ + +S+KK + T S LL GL K+ + KA ++ ++
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 182
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ Y ++G + A M G ++ + N LK L S + + + + +
Sbjct: 337 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ- 395
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ S+N +I A C G DKA ++ EM K G++P + TY TL+SA R
Sbjct: 396 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 455
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
L+ M+ K P+ + + + + V + L M GI D+
Sbjct: 456 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 13/264 (4%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF---IMRIMMLYGKA---GMIKHAM 135
A+ ++ A R D +L+ K+ +GF I+ +L G GM+ A+
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKN------KGFSPDIVTYNILIGSLCSRGMLDSAL 181
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ + CK TV + ++ + L E+ E ++Q D+F++N +I+
Sbjct: 182 EFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE-INLQPDMFTYNSIIRG 240
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
C G +D+A+ ++ + G PDVITY L+ + E G L + MV +GC N
Sbjct: 241 MCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEAN 300
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ T++V I + + + L+ M++ G++PD Y+ +I C+ G +D+A +V
Sbjct: 301 VVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQE 339
M+ +P+ Y T++ LC++
Sbjct: 361 VMISDGCVPDIVNYNTILACLCKQ 384
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 3/210 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KAIQ +M + E H D+ ++N +I FC +D AY V+ M+ G PD++TY
Sbjct: 110 KAIQ--VMHILEN-HGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNI 166
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI + + N ++ + C P + T+ + I+ + + +A KL+ M
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
++PD TYN +I+G CR G++D A ++ S++ + P+ Y ++ L +G + Y
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGY 286
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ D + + +V T S L+ + ++ +
Sbjct: 287 ELMSDMVARGCEANVVTYSVLISSVCRDGK 316
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++ +++++I + C G +++ ++ +M+K G+KPD Y LI+A K+ R ++
Sbjct: 298 EANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIE 357
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ ++M+ GC P++ +N + L ++R+ +A + + G P+ +YN +
Sbjct: 358 VLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALW 417
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWV-PS 360
+GH A + ML + + P+ Y ++I LC++G + A + D M+ + PS
Sbjct: 418 STGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPS 477
Query: 361 VDTISALLEGLKKNNQPCKANTIMA 385
V + + +L GL K ++ A ++A
Sbjct: 478 VVSYNIVLLGLCKVSRVSDAIEVLA 502
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 115/223 (51%), Gaps = 5/223 (2%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ I+I+A G +D+A ++ EM ++ ++PD+ TY ++I ++ + + +
Sbjct: 196 VVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIIS 255
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P++ T+N+ ++ L+N+ + W+A +LM M G E + VTY+++I CR
Sbjct: 256 SISSKGYAPDVITYNILLRGLLNQGK-WEAGYELMSDMVARGCEANVVTYSVLISSVCRD 314
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ + M + L P+ Y +I LC+EG +LA + + VP +
Sbjct: 315 GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+ +L L K +A+ +++ ++ S S++ S+ S
Sbjct: 375 NTILACLCKQK---RADEALSIFEKLGEVGCSPNASSYNSMFS 414
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 13/239 (5%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
H +D F D HL +KSL+ + K + L FL + K H + D+ +
Sbjct: 51 HTLD-FKDTHL------LKSLSRSCKAGNFNESLY----FLRHLVNKGH-KPDVVLCTKL 98
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +DKA VM ++ G PD+I Y +I+ F + NR + + + M KG
Sbjct: 99 IHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGF 157
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ T+N+ I L ++ A + + + +P VTY ++I+ G +D A K
Sbjct: 158 SPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMK 217
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ ML L P+ Y ++I +C+EG + A+ + K + P V T + LL GL
Sbjct: 218 LLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGL 276
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 130/290 (44%), Gaps = 8/290 (2%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLP-QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLY 144
S + G R Y++ + S+ +G I ++L G G + + DM
Sbjct: 236 SIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVAR 295
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ V + + + + RD K + L++ +K ++ D + ++ +I A C+ G +D
Sbjct: 296 GCEANVVTYSVLISSVC--RDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVD 353
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A V+ M G PD++ Y T+++ K R + ++ + GC PN +++N
Sbjct: 354 LAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMF 413
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK--VYSAMLGRR 321
L + +A ++ M G++PD +TYN +I CR G +D A + V M
Sbjct: 414 SALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSE 473
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ Y ++ LC+ + A + + K P+ T + L+EG+
Sbjct: 474 CKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ G +++ + + G KPDV+ T LI + + + +++ G P+L
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+N I R A +++ M+ G PD VTYN++I C G LD A + +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+L P Y +I +G + A + + ++ N P + T ++++ G+ +
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 377 PCKANTIMALVQRR 390
+A I++ + +
Sbjct: 247 VDRAFQIISSISSK 260
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G + A++ M GC + + N L L + + +A +A + E + +
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQK--RADEALSIFEKLGEVGCSPN 405
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S+N + A G +A +++EM GV PD ITY +LIS +D + L
Sbjct: 406 ASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLV 465
Query: 246 LMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M + C P++ ++N+ + L R A +++ M G P+E TY +I+G
Sbjct: 466 DMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGF 525
Query: 304 SGHLDMAKKVYSAML 318
G L+ A+ + + ++
Sbjct: 526 GGCLNDARDLATTLV 540
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A F M GC+ V + + + L + R + + K I +I
Sbjct: 239 KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK-GISPNI 297
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N +I+ C +A ++ EM L + P+++T++ LI+ F K+ G+
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ T++ + + +A KL +M G +PD +YN++I G+C++
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ AK++++ M+ + L P+ Y T+I LCQ G A+ + K+ + +P + T S
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 367 LLEGLKKNNQPCKA 380
LL+G K KA
Sbjct: 478 LLDGFCKQGYLAKA 491
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q I +FN +I C++G +A + +M G +PDV TYTT+I+ K
Sbjct: 185 KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETV 244
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
GL+ M GC P++ T++ I L RR +A + M+ GI P+ TYN +I
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G C A + + M+ +MPN + +I+ C+EG+ A + K +
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 359 PSVDTISALLEG 370
P+V T S+L+ G
Sbjct: 365 PNVVTYSSLMNG 376
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Query: 145 GCKRTVKSLNAALKVLTESRDLK--AIQAFLMEVPEKFHIQF------DIFSFNIVIKAF 196
G +T+ + V+T S + ++QA ++E + F + D+FS+NI+I +
Sbjct: 353 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGY 412
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ + +A + EM G+ PD+++Y TLI + R + L+ M+ G P+L
Sbjct: 413 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+++ + + +A +L MQ ++P+ V YN++I C+S +L A+K++S
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + L PN +IY T+I+ LC+EG + A ++ + P+ + + ++ G ++
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKD 592
Query: 377 PCKA 380
+A
Sbjct: 593 ESRA 596
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ +++I F ++ +D + V+ ++ KLG++ ++T+ TLI+ K + L+
Sbjct: 156 DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELF 215
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P++ T+ I L + A L M G +PD VTY+ +I C+
Sbjct: 216 DDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKD 275
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++S M + + PN Y ++I LC + A M + M N +P++ T
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335
Query: 365 SALL 368
S L+
Sbjct: 336 SLLI 339
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 1/245 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y + A F M GCK V S N + +++ + + E+ +
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ- 431
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ DI S+N +I C++G L +A+ + M G PD+ TY+ L+ F K
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M PN+ +N+ I + R +A KL + G++P+ Y +I G
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G LD A + + M PN Y +I Q D + A + + +K +V
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611
Query: 361 VDTIS 365
V T +
Sbjct: 612 VATTA 616
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMV-EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I FN ++ A +M A + + +M+ G+ PD T LI+ F++ R ++G +
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ G + TFN I L + QA +L M G +PD TY +I G C+
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI 240
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ++ M P+ Y T+I LC++ N A + K P++ T
Sbjct: 241 GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTY 300
Query: 365 SALLEGL 371
++L++GL
Sbjct: 301 NSLIQGL 307
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 1/224 (0%)
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
Q E+ EK I ++ ++N +I +FC G A ++ M + + PD++T++ LI+
Sbjct: 30 QNLFTEMHEK-GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
AF K+ + ++ M+ FP T+N I + R A +++ M G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D VT++ +I G+C++ +D +++ M R ++ N Y T+IH CQ GD + A +
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+ + P T +L GL + KA I+ +Q+ H
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + +K DV+ T ++ KD L+ M KG FPN+ T+N I + R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A++L+ M I PD VT++ +I F + + A+++Y ML + P Y +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
MI C++ + A M K P V T S L+ G K + I + RR
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 4/270 (1%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A + F +M G + S ++ + V + +R L + ++ +KF + D + ++
Sbjct: 89 EAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDM-KKFGLVPDNVIYTVL 147
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ +C G + +A + EM + G DVI Y T+++ K+ + L++ MV +G
Sbjct: 148 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ TF I +A L G M + I+PD V YN +I GFC+ G ++ A +
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
++ M+ R++ PN Y +I+ C G + A+ + ++K P++ T + +++G
Sbjct: 268 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327
Query: 373 KNNQPCKANTIMA-LVQRRVP--HFSSNQL 399
++ KA+ + ++ + V H S N L
Sbjct: 328 RSGDSSKADEFLGRMIAKGVAPDHISYNTL 357
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y + G + A+ +M GC V + N L L + + L E+ E+
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D ++F +I C+ G + KA + M + +KPD++ Y TLI F K E
Sbjct: 207 ALP-DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 265
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ LW+ M+ + FPN T+ + I + +A +L +M GI+P VT N VIKG
Sbjct: 266 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 325
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+CRSG A + M+ + + P+ Y T+I+
Sbjct: 326 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 2/206 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT-LISAFYKDNRPEIGNGLW 244
+F++N +I C+ G +A +++EM +G+ PD TY T L+ + +DN E ++
Sbjct: 36 LFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE-AKEIF 94
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P+L +F+ + R QA M++FG+ PD V Y +++ G+CR+
Sbjct: 95 GEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 154
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++ A K+ ML + + + Y T+++ LC+E A + + +++ +P T
Sbjct: 155 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 214
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+ G ++ KA ++ + +R
Sbjct: 215 TTLIHGHCQDGNMTKALSLFGTMTQR 240
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I A+C G+L++A+ +M M G+KP + TY +I+ K R G+
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P+ T+N + + +A ++ G M R G+ PD V+++ ++ F R+
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
HLD A + M L+P+ IY ++H C+ G+ A + + +++ V V +
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 366 ALLEGLKKNNQPCKANTIM-ALVQR-RVPHF 394
+L GL K A+ + +V+R +P F
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDF 211
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G A+ M G + + N + L + R + E+ K ++
Sbjct: 199 FCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK-GVRP 257
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+++I++ C ++A + EM L + PDV+T+ L+ K+ G+
Sbjct: 258 DVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGII 317
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M+ KG PN AT+N + + + ++A + M G P+ V+YN++I G+C++
Sbjct: 318 KIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKA 377
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A++++ M R L+PN Y T+I LCQ G A + KD + P + T
Sbjct: 378 QRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTC 437
Query: 365 SALLEGLKK 373
+ LL+ L K
Sbjct: 438 TILLDSLCK 446
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D+F FNI+I F + +D A+ V+ ++ KLG +PD +T+++LI+ +++
Sbjct: 111 ELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKF 170
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
++ MV G PNL T+N I+ ++ A L+ M + G PD V YN +
Sbjct: 171 ARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTI 230
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C+ + A ++S + G+ + P+ Y ++H LC A + + M N
Sbjct: 231 IDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNI 290
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALV 387
+P V T + L++ L K +A I+ ++
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 125/255 (49%), Gaps = 1/255 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ F +M G + + + N +K + + L++ +K + DI +N +I
Sbjct: 173 AMEFFDEMVASGYQPNLHTYNTIIKGFCKIGK-TTVAVGLLKKMDKAGGRPDIVIYNTII 231
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ ++ +A + E++ GV+PDV TY+ L+ ++ E + L+N M+
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIM 291
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ TFN+ + L + +A ++ +M G+EP+ TYN ++ G+C + A+ V
Sbjct: 292 PDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMV 351
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ AM+ + MPN Y +I+ C+ + A + + + +P+ + L+ GL +
Sbjct: 352 FDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411
Query: 374 NNQPCKANTIMALVQ 388
+ C+A + +Q
Sbjct: 412 AGRHCEARELFKDMQ 426
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
++ A+D F ++ G + V + + + L S + A E+ +I D+ +F
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMS-LNIMPDVVTF 297
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI++ C+ G+L +A ++ M + GV+P+ TY +L++ + N+ +++ M+
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KGC PN+ ++N+ I +R +A +L M G+ P+ YN +I G C++G
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A++++ M + P+ ++ LC+ G + A + + P++ T L+
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477
Query: 370 GLKKNNQ 376
+ K+ +
Sbjct: 478 AMYKSGK 484
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+NI+I +C+ +D+A + EM G+ P+ Y TLIS + R L+
Sbjct: 363 NVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELF 422
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC P+L T + + L A +L MQ ++P+ VTY+++I+ +S
Sbjct: 423 KDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKS 482
Query: 305 GHL 307
G +
Sbjct: 483 GKI 485
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN+ I +R A ++G + + G EPD VT++ +I G C A + + M+
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
PN Y T+I C+ G +A + K K P + + +++GL K+
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 379 KANTIMALVQRR 390
+A I + ++ +
Sbjct: 242 EALDIFSEIKGK 253
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 8/264 (3%)
Query: 131 IKHAMDTFYDMHL--YGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIF 187
++ AM F D HL C T K+ N ++ L + KA++ L+ V F + DI
Sbjct: 187 VEDAMKLF-DEHLRFQSCNDT-KTFNILIRGLCGVGKAEKALE--LLGVMSGFGCEPDIV 242
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGV-KPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I+ FC+ L+KA + +++ V PDV+TYT++IS + K + + L +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G +P TFNV + A ++ G M FG PD VT+ +I G+CR G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +++ M R + PN Y +I+ LC E A + K+ +P +
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
+++G K + +AN I+ ++++
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKK 446
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 132/312 (42%), Gaps = 36/312 (11%)
Query: 97 DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA 156
D ++ EH + + F + I L G G + A++ M +GC+ + + N
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
++ +S +L +V D+ ++ +I +C+ G + +A ++ +M +LG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 217 VKP-----------------------------------DVITYTTLISAFYKDNRPEIGN 241
+ P DV+T+T+LI + + + G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW M +G FPN T+++ I L N+ R +A +L+G + I P YN VI GF
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G ++ A + M ++ P++ + +I C +G A + + P
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 362 DTISALLEGLKK 373
T+S+LL L K
Sbjct: 488 ITVSSLLSCLLK 499
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +I+ +++N++ ++ C+ G+ D A + M+ GV P+ L+S+F + +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 239 IGNGLW-NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L +GC N + LV R A KL RF D T+N++
Sbjct: 156 FATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I+G C G + A ++ M G P+ Y T+I C+ + N A M KD +K
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGS 271
Query: 358 V--PSVDTISALLEGLKKNNQPCKANTIM 384
V P V T ++++ G K + +A++++
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLL 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 39/295 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG+ A F M G + L + E L A L++ F ++
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ---SFEVEGCC 171
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
N ++ ++ ++ A + E + D T+ LI + E L +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 247 MVCKGCFPNLATFNVRIQHL-----VNKRRSW---------------------------- 273
M GC P++ T+N IQ +NK
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 274 ---QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+A+ L+ M R GI P VT+N+++ G+ ++G + A+++ M+ P+ +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
++I C+ G + + + ++ + P+ T S L+ L N+ KA ++
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F +N VI FC+ G +++A +++ EM+K KPD IT+T LI R +++
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 247 MVCKGCFPNLATFNVRIQHLVN---KRRSWQANKLMGLMQRFGIEPDEV 292
MV GC P+ T + + L+ + ++ N++ Q + P E
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPPET 526
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAGM+ A + GC + + + L +++ ++ A LME I
Sbjct: 11 KAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVA-LMEKITANGCTPTI 69
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ C+MG L++A ++ ++ G PDV+TYT+LI K R L+
Sbjct: 70 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKE 129
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G + + I+ L+ + QA+ + M G PD VT + +I G C++G
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 189
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +++ +M R L PN +Y +IH LC+ + A M K P T +
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249
Query: 367 LLEGLKKNNQ 376
L++GL K+
Sbjct: 250 LIDGLCKSGD 259
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 3/256 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G ++ A+D + GC V + + + L + + ++ +A+ L + + D
Sbjct: 81 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKK--RSFEAYKLFKEMASRGLALD 138
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +I+ + G + +A V M G PDV+T +T+I K R ++
Sbjct: 139 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 198
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G PN ++ I L R+ A +++ M++ PD +TYN++I G C+SG
Sbjct: 199 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 258
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A+ + ML P+ Y +I C+ G+ + A + D P+V T
Sbjct: 259 DVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYG 318
Query: 366 ALLEGLKKNNQPCKAN 381
L+ GL K Q KA+
Sbjct: 319 TLISGLCKRRQLTKAS 334
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I A+ F M G +A + L ++R + L ++ + F D
Sbjct: 186 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP-DT 244
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I C+ G + A EM + G KPDV TY LIS F K + G+++
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PN+ T+ I L +R+ +A+ M+ G PD Y+ ++ G C+SG
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV----D 362
L+ ++ M R + N + +I +LC+ + A + ++++K +P
Sbjct: 365 LEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSL-FNAIRKEGMPHPYAYNS 422
Query: 363 TISALLEGLKKN 374
ISAL++ K N
Sbjct: 423 IISALIKSGKVN 434
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + + +I C+ G + A + M+ G+ P+ + Y+ LI K + + +
Sbjct: 173 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 232
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C P+ T+N+ I L A M G +PD TYN++I GFC++
Sbjct: 233 AQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKA 292
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ D A V+ M R PN Y T+I LC+ A + + ++ P
Sbjct: 293 GNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVY 352
Query: 365 SALLEGLKKNNQ 376
S+L++GL K+ +
Sbjct: 353 SSLVDGLCKSGK 364
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F+I+I + G+L +A+ + E G D+ TYTT++ K+ + + L +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
GC P +AT+N + L R +A L+ + G PD VTY +I G +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K++ M R L + Y +I L Q G A + K + VP V T+S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 368 LEGLKKNNQPCKANTIMALVQ 388
++GL CKA I A V+
Sbjct: 181 IDGL------CKAGRIGAAVR 195
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 34/224 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA + A++ M C + N + L +S D+ A +AF E+ E + D+
Sbjct: 221 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA-GCKPDV 279
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI+I FC+ G D A V +M P+V+TY TLIS K + + +
Sbjct: 280 YTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQH 339
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE------------------ 288
M +GC P+ ++ + L + L M+R G+
Sbjct: 340 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRV 399
Query: 289 ---------------PDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
P YN +I +SG ++ + VY M
Sbjct: 400 DEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 130/277 (46%), Gaps = 20/277 (7%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A + F +M G + + N+ + L + K + L E+ + I D+ SFN
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVSFN 275
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
V+ A C+ G + +A+ V+ +M + GV+P+V+TYT L+ + + +++ MVCK
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF-------------------GIEPDE 291
GC PN+ ++N I +R +A LM G P+
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNV 395
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
++YN +I G+C+ +D A ++ M + L+P+ Y T+IH LC A + +
Sbjct: 396 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 455
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+ + +P++ T LL+ L KN +A ++ ++
Sbjct: 456 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 112/223 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + PD +TY+TLI R + L+
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV PNL T+ + + +L R +A L+ ++ ++PD N+ I G CR+
Sbjct: 454 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 513
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L P+ Y MI+ LC+ G + A + ++ + +
Sbjct: 514 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 573
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+ + G +NN+ +A ++ + R ++ ++ F +LS
Sbjct: 574 NTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 616
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D +F +I+ C G + +A + +M G +PDV+TY TLI+ K
Sbjct: 128 QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L MV K C PN+ +N I L R+ +A L M GI PD TYN +I C
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ + M+ ++MP+ + T++ LC+EG A+ + +++ P+V
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307
Query: 363 TISALLEG 370
T +AL++G
Sbjct: 308 TYTALMDG 315
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I +I++ +I+I +FC + + A+ V+ ++ KLG +PD T+TTLI + +
Sbjct: 88 DSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKI 147
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G P++ T+ I L + A +L+G M + +P+ YN +
Sbjct: 148 GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+ + + P+ Y ++IH LC ++ + + +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+P V + + +++ L K + +A+ ++ ++QR V
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
+ E + +A+ F + E F + D+ ++ +I C++G A ++ M + +
Sbjct: 141 ICVEGKIGEALHLFDKMIGEGF--RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ 198
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P+V Y T+I + KD + L++ MV KG P++ T+N I L N L
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ M I PD V++N V+ C+ G + A V M+ R + PN Y ++ C
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + A + + K +P+V + + L+ G K
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 10/186 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I++ C+ L +A ++ ++ + PD+ I + E L+
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 523
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG P++ T+++ I L + +A+KL M G + YN + +GF R+
Sbjct: 524 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 583
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG-DFNLAYIM---CKDSMKKNWVPS 360
A ++ M+ R + + L +G D +L I+ CK W+ +
Sbjct: 584 NETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRNGCK------WIST 637
Query: 361 VDTISA 366
D+ S+
Sbjct: 638 FDSSSS 643
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L L ++R L A L + E ++ DI NI I C G L+ A + + G
Sbjct: 472 LDYLCKNRYLAEAMALLKAI-EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 530
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
++PDV TY+ +I+ + + + L+ M GC N +N + + + +A
Sbjct: 531 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 590
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
+L+ M G D T L +K G LD + K
Sbjct: 591 QLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSLK 625
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ FN + + + L M FGI P+ T +++I FC + A V
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL-K 372
+ +L P+ + T+I +C EG A + + + + P V T L+ GL K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 373 KNNQPCKANTIMALVQR 389
N + ++VQ+
Sbjct: 179 VGNTSAAIRLLGSMVQK 195
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 51/298 (17%)
Query: 118 IMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
++ + ML G K G IK A D F M + G V S L + A + L+
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIML-------NGYATKGCLV 380
Query: 175 EVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
++ + F + DI++F+++IKA+ G+LDKA ++ EM+ GVKPDV+TYTT+I
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFP---------------------------------- 254
+A + + + +N M+ +G P
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 255 -NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
++ F+ I +L R A + L G PD V Y++++ G+C G ++ A +V
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ AM+ + PN +Y T+++ C+ G + + ++ ++K PS + +++GL
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 154 NAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N LK E+ R +A+ L PE + D+FS++I++K+ C+ G +A ++ M
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVP-DVFSYSILLKSLCDQGKSGQADDLLRMM 212
Query: 213 QKLGV--KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+ G PDV+ YTT+I F+K+ L+ MV +G P+L T++ + L R
Sbjct: 213 AEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 272
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+A + M G+ PD TYN +I G+ +G A +V+ M ++P+
Sbjct: 273 AMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLN 332
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ LC+ G A + K P V + +L G
Sbjct: 333 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNG 372
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + + ++ + L ++R + +AFL ++ K + D
Sbjct: 235 KEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK-GVLPDN 293
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+T L+ + K + + +++
Sbjct: 294 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDT 353
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ ++ + + K L LM GI PD T++++IK + G
Sbjct: 354 MAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGM 413
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + P+ Y T+I LC+ G + A + + P
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473
Query: 367 LLEGLKKNNQPCKANTIM 384
L++G + KA ++
Sbjct: 474 LIQGFCTHGSLLKAKELI 491
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQ 183
Y GM+ AM F +M +G K V + + L + A++ F + + +
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG--VA 465
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++++ +I+ FC G L KA +++E+ G++ D++ ++++I+ K R +
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNI 525
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++L V G P+ +++ + + +A ++ M GIEP+ V Y ++ G+C+
Sbjct: 526 FDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCK 585
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +D ++ ML + + P+ +Y +I L G
Sbjct: 586 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ DI N ++K FCE D+A +++ +LG PDV +Y+ L+ + +
Sbjct: 146 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 205
Query: 241 NGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L +M G C P++ + I + +A L M + GI PD VTY+ V+
Sbjct: 206 DDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVV 265
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ + A+ M+ + ++P+ Y +I+ G + A + K+ + + +
Sbjct: 266 HALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 325
Query: 359 PSVDTISALLEGLKK 373
P V T++ L+ L K
Sbjct: 326 PDVVTLNMLMGSLCK 340
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 9/230 (3%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI-QFDIFSFNIVIKAFCEMGILD 203
GC V S + LK L + L + E + D+ ++ VI F + G ++
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVN 240
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD++TY++++ A K MV KG P+ T+N I
Sbjct: 241 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLI 300
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD VT N+++ C+ G + A+ V+ M +
Sbjct: 301 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN 360
Query: 324 PNRKIYQTMIHYLCQEGDF----NLAYIMCKDSMKKNWVPSVDTISALLE 369
P+ Y+ M++ +G +L +M D + P + T S L++
Sbjct: 361 PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGI----APDIYTFSVLIK 406
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++++ +C +G ++KA V M G++P+V+ Y TL++ + K R + G L+
Sbjct: 537 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLF 596
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P+ +N+ I L R+ A M GI ++ TYN+V++GF ++
Sbjct: 597 REMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKN 656
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A ++ + + + TMI + Q A + + VP V T+
Sbjct: 657 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTV 716
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRP-EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
++ + G++ D+I L+ F + R E + L + GC P++ ++++ ++ L ++
Sbjct: 140 QLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQ 199
Query: 270 RRSWQANKLMGLMQRFG--IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+S QA+ L+ +M G PD V Y VI F + G ++ A ++ M+ R + P+
Sbjct: 200 GKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLV 259
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y +++H LC+ A + + K +P T + L+ G Q
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 308
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 109/263 (41%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + AM+ F M G + + ++ L + ++E+ ++ DI
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNN-GMRLDI 503
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+ +I C++G + A + +G PD + Y+ L+ + + E +++
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G PN+ + + R + L M + GI+P + YN++I G +G
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
AK + M + N+ Y ++ + F+ A + K+ N + T++
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
++ G+ + + +A + A + R
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISR 706
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 3/171 (1%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA- 275
+ P TY L+ + +RPE+ + ++ G ++ N ++ +R+ +A
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML--GRRLMPNRKIYQTMI 333
+ L+ G PD +Y++++K C G A + M G P+ Y T+I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+EGD N A + K+ +++ P + T S+++ L K KA +
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFL 281
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 69/143 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + ++ +C++G +D+ + EM + G+KP I Y +I + R
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G N T+N+ ++ R +A L ++ ++ D +T N +I G
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688
Query: 302 CRSGHLDMAKKVYSAMLGRRLMP 324
++ ++ AK +++++ L+P
Sbjct: 689 FQTRRVEEAKDLFASISRSGLVP 711
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN-GL 243
D+ ++N+++ C + ++A ++ +M+ ++PDV +Y L+ A K N P+ +
Sbjct: 254 DLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFM 313
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV KG F ++ ++N I+ + + +A KL M R GI PD VT+ ++IK F R
Sbjct: 314 VTKMVPKG-FCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLR 372
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G+ DMAKK+ M G L+P+R Y T+I + C+ G +A+ + D ++K P V +
Sbjct: 373 EGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVS 432
Query: 364 ISALLEGLKKN 374
+AL+ G K+
Sbjct: 433 YNALINGFCKS 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME--VPEKFHIQFDIF 187
M + A+ M + V S N LK ++ F++ VP+ F D+
Sbjct: 270 MFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF---CDVV 326
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+N +IKAFC + +AY + EM + G+ PDV+T+T LI AF ++ ++ L +LM
Sbjct: 327 SYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLM 386
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P+ + I H + A+ + M GI PD V+YN +I GFC+S +
Sbjct: 387 AGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRV 446
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+Y ML R P+ Y+ +I L +E
Sbjct: 447 GEVMHLYEQMLQRGSFPDEVTYKLIIGALVRE 478
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 3/253 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQ 183
+ +AG I A+ M GCK + + N L E +A++ L++ E I+
Sbjct: 230 FCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVK--LLKKMECSAIE 287
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D++S+N ++KA C+ DKAYL MV DV++Y T+I AF + L
Sbjct: 288 PDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKL 347
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG P++ TF + I+ + + S A KL+ LM G+ PD + Y +I C+
Sbjct: 348 FEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCK 407
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG ++MA ++ M+ + + P+ Y +I+ C+ + + +++ P T
Sbjct: 408 SGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVT 467
Query: 364 ISALLEGLKKNNQ 376
++ L + N+
Sbjct: 468 YKLIIGALVRENK 480
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 39/285 (13%)
Query: 140 DMHLYGCKRTVKSLNAALKVL-TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
DM C + + N L +L E+R+ A++ F V + D+ +F I+I C+
Sbjct: 104 DMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGR--EPDVVTFTIIIDGLCK 161
Query: 199 MGILDKAYLVMVEMQKLGVKPD------------------------------------VI 222
M D A + M G++PD +
Sbjct: 162 MKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTL 221
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
Y LIS F + R + + + M GC P+L T+NV + + N+ +A KL+ M
Sbjct: 222 VYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKM 281
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ IEPD +YN ++K C++ H D A + + + Y T+I C +
Sbjct: 282 ECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNN 341
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
AY + ++ +K P V T + L++ + A ++ L+
Sbjct: 342 RRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLM 386
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 107/267 (40%), Gaps = 39/267 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG+I +A+ F +M L C+ N + VL H +F
Sbjct: 19 YVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIR------------------HSRF 60
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ A+ +M LG TY+ IS + + L
Sbjct: 61 DL------------------AHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLL 102
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C P++ FN+ + L + R A ++ G M G EPD VT+ ++I G C+
Sbjct: 103 KDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKM 162
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A + + ML + + P+ K + LC G +LAY + + + V T+
Sbjct: 163 KKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGG-LSEVSTL 221
Query: 365 --SALLEGLKKNNQPCKANTIMALVQR 389
+AL+ G + + KA +++ + R
Sbjct: 222 VYNALISGFCRAGRIDKALAMVSFMSR 248
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + L A R++ E L+ QK P F M I L K G+++ A++
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT-FNMLISFLCRK-GLVEPALE 118
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ YGC S N L + + + AFL ++ DI S+N ++ A
Sbjct: 119 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL-DLMVSRGCYPDIVSYNTLLTAL 177
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + + L N MV KG P++
Sbjct: 178 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ L + R A + G +Q GI P+ V YN +I G C+ A +++
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEG 340
M+G MPN Y +I L EG
Sbjct: 298 MIGNGCMPNESTYTILIEGLAYEG 321
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 131/276 (47%), Gaps = 4/276 (1%)
Query: 99 IEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
++ +E K+LP G + ++L G A + A + +M GC V + N
Sbjct: 43 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 102
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L ++ L ++P K+ + S+N ++ AFC+ +DKA + M
Sbjct: 103 LISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 161
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PD+++Y TL++A + ++ L + + KGC P L ++N I L ++ +A
Sbjct: 162 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 221
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M G++PD +TY+ + G CR ++ A + + + + PN +Y +I
Sbjct: 222 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 281
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ + + A + + +P+ T + L+EGL
Sbjct: 282 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 317
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
CKR+ A+K+L E RD DI ++N+V+ C+ G +D A
Sbjct: 3 CKRS--GYKQAMKLLDEMRDKGCTP--------------DIVTYNVVVNGICQEGRVDDA 46
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ + G +P+ ++Y ++ R E L M KGC PN+ TFN+ I
Sbjct: 47 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 106
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K A +++ + ++G P+ ++YN ++ FC+ +D A M+ R P+
Sbjct: 107 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 166
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Y T++ LC+ G+ ++A + K P + + + +++GL K
Sbjct: 167 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 214
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K AM +M GC + + N + + E R AI+ FL +P + + + S+N
Sbjct: 9 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE-FLKNLP-SYGCEPNTVSYN 66
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IV+K C + A +M EM + G P+V+T+ LIS + E + +
Sbjct: 67 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 126
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN ++N + +++ +A + LM G PD V+YN ++ CRSG +D+A
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + + P Y T+I L + G A + + + K P + T S + G
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246
Query: 371 LKKNNQ 376
L + ++
Sbjct: 247 LCREDR 252
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%)
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A C+ +A ++ EM+ G PD++TY +++ ++ R + + GC P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N ++N+ ++ L R A +LMG M + G P+ VT+N++I CR G ++ A +V
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ PN Y ++H C++ + A + + P + + + LL L ++
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 375 NQ 376
+
Sbjct: 181 GE 182
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 138 FYDMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F D+ + GC + S N L L S ++ L ++ +K + S+N VI
Sbjct: 154 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYNTVIDGL 212
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G +A ++ EM G++PD+ITY+T+ + +++R E + + G PN
Sbjct: 213 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 272
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+N I L +R + A L M G P+E TY ++I+G G + A+ +
Sbjct: 273 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 332
Query: 317 MLGRRLMPNRKIYQTMIHYL 336
+ R ++ I + I L
Sbjct: 333 LCSRGVVRKSLINKGAIRLL 352
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KGC P++ T+NV + + + R A + + + +G EP+ V+YN+V+KG C + +
Sbjct: 21 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 80
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+++ M + PN + +I +LC++G A + + K P+ + + LL
Sbjct: 81 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH 140
Query: 370 GLKKNNQPCKANTIMALVQRR 390
K + KA + L+ R
Sbjct: 141 AFCKQKKMDKAMAFLDLMVSR 161
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G + A++ + + GC + S N + LT++ K L E+ K +Q DI
Sbjct: 179 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDI 237
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ + C ++ A ++Q +G++P+ + Y +I K L+
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ GC PN +T+ + I+ L + +A L+ + G+ V +L+ KG R
Sbjct: 298 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV----VRKSLINKGAIR 350
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 132/256 (51%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + + L+ L + + K + F E+ E
Sbjct: 72 LITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + + V ++K G++P V+++ TL++ + + + G
Sbjct: 132 YPA-SLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKG 190
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + + +AN+L M G+ P+ VT+ +I G
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDG 250
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPD 310
Query: 361 VDTISALLEGLKKNNQ 376
T + L++G K+
Sbjct: 311 KITYTTLIDGSCKDGD 326
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ + F + +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD--KGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D+A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 KVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 376 GLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 85 AIECYRLTREHKFRVPFD--TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNIL 142
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F K+ + +++ + G P++ +FN + + + + +L M G+
Sbjct: 143 MHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGV 202
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 203 QPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAME 262
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A ++
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLI 299
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 6/239 (2%)
Query: 57 ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG 116
+ D +K F+L K+ H V + Y + ++ L + D L L +G
Sbjct: 184 QGDLDKGFRL-KSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEM--LDKGLVPN 240
Query: 117 FIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
+ ++ G K G + AM+ + M + + N + L + DLK + +
Sbjct: 241 GVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLIN 300
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ K ++ D ++ +I C+ G L+ A+ M + ++ D + YT LIS ++
Sbjct: 301 EMSMK-GLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQE 359
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
R + M+ G P+ T+ + I K W +KL+ MQR G P VT
Sbjct: 360 GRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A++ F M V + F D+ S+ +I +C++ +DKA + EM + PD TY T
Sbjct: 328 EAVKVFDMMVRKGFAP--DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 385
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L+ R + L++ MV +G P+L T+++ + L R +A L+ ++
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ PD YN++I G CR+G L+ A+ ++S + + L P+ Y MIH LC+ G N A
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + + P T + + G +NN+ +A I L + FS++ S+L
Sbjct: 506 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA--IQLLEEMLARGFSADSCFLMLSVL 563
Query: 407 SK 408
S+
Sbjct: 564 SE 565
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 6/255 (2%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL-NAALKVLTESRDLKAIQAFLMEV 176
++R + + GK G H D D T +L N KV S ++ +++
Sbjct: 141 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---- 196
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E+ + Q D+ + +I + C+ + +A+ + +M G+ PD+ TYT+L+ A
Sbjct: 197 -EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ L N MV P++ F+ + L + + +A++++ +M + G+EPD VTY
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ G C +D A KV+ M+ + P+ Y T+I+ C+ + A + ++ +K
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375
Query: 357 WVPSVDTISALLEGL 371
W+P T + L+ GL
Sbjct: 376 WIPDTKTYNTLMYGL 390
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F + ++++ NI+I +FC + + A+ V+ ++ KLG +PD T+TTLI + +
Sbjct: 92 DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI 151
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L + A +L+ M++ +PD V Y +
Sbjct: 152 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 211
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+G+ + P+ Y +++H LC ++ + +
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+P V S +++ L K + +A+ I+ ++QR V
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K Q D +F +I+ C G + +A + +M G +P+V+TY TLI+ K
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M C P++ + I L R+ +A L M GI PD TY ++
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C + + M+ +++P+ I+ T++ LC+EG A+ + +++
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307
Query: 359 PSVDTISALLEG 370
P V T + L++G
Sbjct: 308 PDVVTYTTLMDG 319
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M FG+ P+ T N++I FC + A V + +L P+ + T+I LC EG
Sbjct: 91 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
A + + + + P+V T L+ GL CK A ++
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGL------CKVGNTSAAIR 191
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 8/264 (3%)
Query: 131 IKHAMDTFYDMHL--YGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIF 187
++ AM F D HL C T K+ N ++ L + KA++ L+ V F + DI
Sbjct: 187 VEDAMKLF-DEHLRFQSCNDT-KTFNILIRGLCGVGKAEKALE--LLGVMSGFGCEPDIV 242
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGV-KPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I+ FC+ L+KA + +++ V PDV+TYT++IS + K + + L +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G +P TFNV + A ++ G M FG PD VT+ +I G+CR G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +++ M R + PN Y +I+ LC E A + K+ +P +
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
+++G K + +AN I+ ++++
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKK 446
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 132/312 (42%), Gaps = 36/312 (11%)
Query: 97 DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA 156
D ++ EH + + F + I L G G + A++ M +GC+ + + N
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
++ +S +L +V D+ ++ +I +C+ G + +A ++ +M +LG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 217 VKP-----------------------------------DVITYTTLISAFYKDNRPEIGN 241
+ P DV+T+T+LI + + + G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW M +G FPN T+++ I L N+ R +A +L+G + I P YN VI GF
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G ++ A + M ++ P++ + +I C +G A + + P
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 362 DTISALLEGLKK 373
T+S+LL L K
Sbjct: 488 ITVSSLLSCLLK 499
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +I+ +++N++ ++ C+ G+ D A + M+ GV P+ L+S+F + +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 239 IGNGLW-NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L +GC N + LV R A KL RF D T+N++
Sbjct: 156 FATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I+G C G + A ++ M G P+ Y T+I C+ + N A M KD +K
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGS 271
Query: 358 V--PSVDTISALLEGLKKNNQPCKANTIM 384
V P V T ++++ G K + +A++++
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLL 300
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 139/370 (37%), Gaps = 80/370 (21%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQ 111
K + +P F+ ++ + + + + + L A D + E KS P
Sbjct: 78 KLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN 137
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
R GF++ GK + +++ GC V SL L L D A++
Sbjct: 138 NRLLGFLVSSFAEKGKLHFATALLLQSFEVE--GCCMVVNSLLNTLVKLDRVED--AMKL 193
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F + +F D +FNI+I+ C +G +KA ++ LGV +S F
Sbjct: 194 FDEHL--RFQSCNDTKTFNILIRGLCGVGKAEKA------LELLGV----------MSGF 235
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL-----VNKRRSW------------- 273
GC P++ T+N IQ +NK
Sbjct: 236 -------------------GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 274 ------------------QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+A+ L+ M R GI P VT+N+++ G+ ++G + A+++
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M+ P+ + ++I C+ G + + + ++ + P+ T S L+ L N
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 376 QPCKANTIMA 385
+ KA ++
Sbjct: 397 RLLKARELLG 406
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F +N VI FC+ G +++A +++ EM+K KPD IT+T LI R +++
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
MV GC P+ T + + L+ + +A L
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 53/342 (15%)
Query: 45 PLEPPALVKLKAERDPEKLFQLFKANAHNRIVI-------------ENKYAFEDTVSRLA 91
P AL L DP + Q+ K + + + + + + V L
Sbjct: 332 PAAEEALANLNYSMDPYQANQVLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILG 391
Query: 92 GARRFDYIEHLLEHQKSLPQGRREGFIM--RIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
A++F I LL+ + G + + R++ YG+A + A+D F +M GC+
Sbjct: 392 RAKQFGAINKLLDQM--VKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEP- 448
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
D ++ +I + G LD A +
Sbjct: 449 -----------------------------------DRVTYCTLIDIHAKAGFLDFALEMY 473
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
MQ G+ PD TY+ +I+ K + L+ MV +GC PNL T+N+ I
Sbjct: 474 QRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKA 533
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R A KL MQ G +PD+VTY++V++ G+LD A+ V+S M + +P+ +Y
Sbjct: 534 RNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVY 593
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ + G+ A+ + + P+V T ++LL
Sbjct: 594 GLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAF 635
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ G ++K ++ +M K G +P+V+TY LI ++ + N ++N M GC P+
Sbjct: 395 QFGAINK---LLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRV 451
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ I A ++ MQ G+ PD TY+++I ++GHL A K++ M
Sbjct: 452 TYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM 511
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ + +PN Y MI + ++ A + +D + P T S ++E L
Sbjct: 512 VEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYL 571
Query: 378 CKANTIMALVQRR 390
+A + + ++R+
Sbjct: 572 DEAEAVFSEMKRK 584
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ GKAG + A F +M GC + + N + + ++R+ ++ ++ +
Sbjct: 491 IINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDM-QSA 549
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
Q D +++IV++ G LD+A V EM++ PD Y L+ + K E
Sbjct: 550 GFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKA 609
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ M+ G PN+ T N + + + A L+ M G+ P TY L++
Sbjct: 610 WQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLS 668
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ L KA + A+ + DM G + + + ++VL L +A E+ K
Sbjct: 526 MIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKN 585
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D + +++ + + G ++KA+ M G++P+V T +L+SAF + ++
Sbjct: 586 WVP-DEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADA 644
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L M+ G P+L T+ + + R + LM G
Sbjct: 645 YNLLQSMLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTG 690
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ AM F +M+ G K V + N+ + L + + A ++ ++ +I + N
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC-LKPNIITHN 310
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ FC+ ++ +A + +M K G+ P+V TY LI A+ KD E L+ +M+ K
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 370
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+++T+N I L K A L+ M ++ D +TYN++I C G + A
Sbjct: 371 GVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKA 430
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M + L P++ Y TMI C+EG+ A + K + +V T + L++G
Sbjct: 431 LRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKG 490
Query: 371 LKKNNQPCKANTIM 384
K ++ AN ++
Sbjct: 491 FCKKDKLEDANGLL 504
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 13/240 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI---QAFLMEVPEKFHIQ 183
K G + A D DM + G V + N + + + + A L E+ I
Sbjct: 175 KVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD-GIC 233
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +FNI+I FC+ + A V EM + GVKP+V+TY +LI+ + + L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ MV PN+ T N + + QA +L M + GI P+ TYN++I +C+
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+++ A +Y MLG+ + P+ Y +I LC++GD A +N V +DT
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAA---------RNLVSEMDT 404
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 35/251 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + + F YG K +V S N + L + ++ ++ E+ + I+
Sbjct: 103 YAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRR-RIEP 161
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ SFNIVI C++G L+KA ++ +M+ GV +VITY TLI + K +IG
Sbjct: 162 TLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK--MGKIG---- 215
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++A+ ++ M+ GI P+EVT+N++I GFC+
Sbjct: 216 --------------------------KMYKADAILKEMRADGICPNEVTFNILIDGFCKD 249
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDT 363
++ A KV++ M + + PN Y ++I+ LC G N A + +D M + + P++ T
Sbjct: 250 KNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL-RDQMVNSCLKPNIIT 308
Query: 364 ISALLEGLKKN 374
+ALL G KN
Sbjct: 309 HNALLNGFCKN 319
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 3/217 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K M+K A + F DM G V + N + + +++ AF L + +
Sbjct: 316 FCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENME--DAFALYRIMLGKGVC 373
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ ++N +I C G L+ A ++ EM +K D+ITY LI + + L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG P+ T+N I + A L M++ G + TYN++IKGFC+
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L+ A + + ML + L+PNR Y+ + + ++G
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 103/191 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V+++ TL++ + + + G L +
Sbjct: 125 LYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKS 184
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C+SG
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSG 244
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 304
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 305 TLIDGCCKEGD 315
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + K+ ++ + SFN ++ + +G LD+ + + M GV+PDV TY
Sbjct: 140 DIRVAQSVFNAIT-KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 198
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN TF I R A ++ M
Sbjct: 199 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLS 258
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I C+EGD
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLET 318
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + + A ++
Sbjct: 319 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVL 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 127 FFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKS 184
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSG 244
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 304
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG + A + ++ +
Sbjct: 305 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSA 364
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 365 GLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 398
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 74 AIECYRLTREHKFWVPFD--TCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNIL 131
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F K+ + ++N + G P++ +FN + + + +L M G+
Sbjct: 132 MHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGV 191
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 192 QPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAME 251
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A+ ++
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLI 288
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 135/340 (39%), Gaps = 47/340 (13%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
+AG R+ +++ S+P ++ + G + A+ DM GC+
Sbjct: 118 VAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPN 177
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + L+ + + + A L E+ K +I ++N++I C G +D A ++
Sbjct: 178 VVTYTVLLEAMCRNSGFEQAMAVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDARELL 236
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF---------- 259
+ G +PD ++YTTL+ R + L+ M+ K C PN TF
Sbjct: 237 NRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRG 296
Query: 260 -------------------------NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N+ I + + R A KL+ M +G PD ++Y
Sbjct: 297 GMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISY 356
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
V+KG CR+ D AK++ + M+ PN + T I LCQ+G A ++ + +
Sbjct: 357 TTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSE 416
Query: 355 KNWVPSVDTISALLEGLKKNNQ-----------PCKANTI 383
V T +AL+ G PCK NTI
Sbjct: 417 HGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTI 456
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 144/370 (38%), Gaps = 84/370 (22%)
Query: 80 KYAFE-DTVS------RLAGARRFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKAG 129
Y F+ DTVS L ++R+D +E L + +P ++R + + G
Sbjct: 241 SYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR---FFCRGG 297
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M++ A+ M +GC + N L
Sbjct: 298 MVERAIQVLEQMTEHGC-----ATNTTL-------------------------------C 321
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NIVI + C+ G +D A+ ++ +M G PD I+YTT++ + R + L N MV
Sbjct: 322 NIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVR 381
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
C PN TFN I L K QA L+ M G VTYN ++ GFC GH+D
Sbjct: 382 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDS 441
Query: 310 AKKVY--------------------------------SAMLGRRLMPNRKIYQTMIHYLC 337
A +++ + ML PN + ++ + C
Sbjct: 442 ALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFC 501
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
Q+G A + + M+ P++ T + LL+G+ K+ C + + L+ V S
Sbjct: 502 QKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKD---CSSEDALELLHGLVSKGVSP 558
Query: 398 QLSAFKSILS 407
+ F SI+
Sbjct: 559 DVITFSSIIG 568
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 4/212 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A++ F M CK + L L + L + E+ + ++ +
Sbjct: 437 GHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEM-LRGDCPPNVVT 492
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN+++ FC+ G L++A ++ +M + G P++ITY TL+ KD E L + +V
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P++ TF+ I L + R +A +L ++Q G+ P V YN ++ G C+ +D
Sbjct: 553 SKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEID 612
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A ++ M+ MPN Y +I L EG
Sbjct: 613 NAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 644
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+Y C + +++L + +R L+A + V D+F++N ++ +C G L
Sbjct: 76 VYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV--------DVFAYNTLVAGYCRYGHL 127
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A ++ M V PD TYT LI R L + M+ +GC PN+ T+ V
Sbjct: 128 DAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVL 184
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ + QA ++ M+ G P+ VTYN++I G CR G +D A+++ + +
Sbjct: 185 LEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGF 244
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
P+ Y T++ LC ++ + + M+KN +P+ T L+
Sbjct: 245 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 129/312 (41%), Gaps = 4/312 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
+ ++ + L A R+D + LL E + + + G+I+ A+
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M +GC V + NA + + + +P K + ++ ++ C
Sbjct: 412 EQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP----NTITYTTLLTGLCN 467
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
LD A ++ EM + P+V+T+ L+S F + E L M+ GC PNL T
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N + + S A +L+ + G+ PD +T++ +I + ++ A +++ +
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
+ P +Y ++ LC+ + + A + +P+ T L+EGL
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLK 647
Query: 379 KANTIMALVQRR 390
+A +++++ R
Sbjct: 648 EAQDLLSVLCSR 659
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C G P++ I++L + R+ A +++ + G D YN ++ G+CR GHLD
Sbjct: 69 CDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 128
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+++ +M + P+ Y +I LC G A + D +++ P+V T + LL
Sbjct: 129 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 185
Query: 369 EGLKKNN 375
E + +N+
Sbjct: 186 EAMCRNS 192
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 38/192 (19%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++ +I+ C G A V+ + G DV Y TL++ +
Sbjct: 75 DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGY------------- 121
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
R HL RR L+G M + PD TY +I+ C
Sbjct: 122 ----------------CRYGHLDAARR------LIGSMP---VAPDAYTYTPLIRVLCDR 156
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + ML R PN Y ++ +C+ F A + + K P++ T
Sbjct: 157 GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTY 216
Query: 365 SALLEGLKKNNQ 376
+ ++ G+ + +
Sbjct: 217 NVIINGMCREGR 228
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 105 HQKSLPQGRREGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
H+ G R ++ +++ Y K+G ++ A + M G +++ NA LK L +
Sbjct: 36 HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRA 95
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
D A+ + E I D+++++ +I+A+C++ D A V+VEM++ G + +T
Sbjct: 96 -DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVT 154
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI+ + E G M G P+ T+ I L RRS +A L+ M
Sbjct: 155 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 214
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
++P+ V Y +I GF R G+ D A K+ M+ + PN+ Y ++ LC+ G +
Sbjct: 215 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 274
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEG 370
A ++ K ++ + P T + ++EG
Sbjct: 275 RASLLLKQMVRDSHRPDTITYNLIIEG 301
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 1/310 (0%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
Y + + R FD + +L + G ++ ++G ++ A D
Sbjct: 118 YTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 177
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M YG + A + L +SR +A L E+ ++ ++ + +I F G
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA-ELKPNVVVYANLIDGFMREG 236
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
D+A+ ++ EM GV+P+ ITY L+ K + + + L MV P+ T+N
Sbjct: 237 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ I+ A +L+ M+ GI P+ TY+++I G C+SG + A + M +
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
L PN +Y +I C+EG+ +LA + K N +P + ++L+ GL K + ++
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416
Query: 381 NTIMALVQRR 390
A +Q R
Sbjct: 417 TKYFAQMQER 426
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
K A +M G V + + + L +S + + L E+ K ++ + F +
Sbjct: 309 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAP 367
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I +C G + A + +M K+ V PD+ Y +LI K R E + M +G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN T++ I + A +L+ M G++P++V Y +++ + +S ++
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ +ML + +M + +IY +IH L G+ A+ + + K VP V S+L+ GL
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547
Query: 372 KKNNQPCKANTIMALVQRR 390
K KA I+ + ++
Sbjct: 548 CKTADREKAFGILDEMSKK 566
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 100/247 (40%), Gaps = 39/247 (15%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ I+I G ++ A+ V+ E++K G PDV Y++LIS K E G+ + M
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN+ +N I L A + + G+ P+ VTY +I G C+ G +
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----------------------NLAY 346
A +Y+ ML + P+ +Y + GD NL
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVD 684
Query: 347 IMCKDS------------MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP-- 392
CK M + VP+ TI ++ GL + + + +TI +Q++
Sbjct: 685 GFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSES 744
Query: 393 ---HFSS 396
HFSS
Sbjct: 745 AARHFSS 751
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 4/186 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N++I+ A+ ++ EM+ G+ P+V TY+ +I + PE + L
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG PN + I + A ++ M + + PD YN +I G +
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----NLAYIMCKDSMKKNWVPS 360
G ++ + K ++ M R L+PN Y +IH + GD L M +K N V
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470
Query: 361 VDTISA 366
+D + +
Sbjct: 471 IDLLES 476
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++ +I + + G L+ A ++ M G+KP+ + Y L+ +++K + E + +
Sbjct: 433 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 492
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G + + + I +L + A +++ +++ G PD Y+ +I G C++
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTAD 552
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + M + + PN Y +I LC+ GD + A + + K VP+ T ++
Sbjct: 553 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612
Query: 367 LLEGLKKNNQPCKANTI 383
L++G CK I
Sbjct: 613 LIDG------SCKVGDI 623
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 39/311 (12%)
Query: 69 ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YG 126
A R ++ N++ + + + E L+ Q+ L G + ++ I +L Y
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV--QRMLDTGLKPNDVIYIDLLESYF 478
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+ I+ TF M G + + L+ S +++A L E+ + + D+
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVP-DV 537
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ +KA+ ++ EM K GV P+++ Y LI K ++N
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY------------ 294
++ KG PN T+ I A L M GI PD Y
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657
Query: 295 ----------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
N ++ GFC+ G + K+ ++GR L+PN + +
Sbjct: 658 LEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 717
Query: 333 IHYLCQEGDFN 343
I L + G +
Sbjct: 718 ISGLSEAGKLS 728
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K ++ D++ +N +I ++G ++++ +MQ+ G+ P+ TY+ LI + K+ E
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M+ G PN + ++ + + M G+ D Y ++I
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
SG+++ A +V S + +P+ +Y ++I LC+ D A+ + + KK
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 569
Query: 359 PSVDTISALLEGLKKNNQPCKA----NTIMA 385
P++ +AL++GL K+ A N+I+A
Sbjct: 570 PNIVCYNALIDGLCKSGDISYARNVFNSILA 600
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%)
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
L+ + K R + + +M +G P++ N ++ L+ K+ M
Sbjct: 52 VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI PD TY+ +I+ +C+ D AKKV M R N Y +I LC+ G A
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ KD VP T AL+ GL K+ + +A ++
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL-- 246
++++ + + G + A V++ M+ G+ P + L+ + + + LW +
Sbjct: 50 LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMAL---LWKVRE 106
Query: 247 -MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV G P++ T++ I+ R A K++ M+ G + VTYN++I G CRSG
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A M L+P+ Y +I+ LC+ N A + + P+V +
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226
Query: 366 ALLEGLKKNNQPCKA 380
L++G + +A
Sbjct: 227 NLIDGFMREGNADEA 241
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 143/317 (45%), Gaps = 41/317 (12%)
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
E + ++ + +A M A+D F + + GC ++S NA L +R AF
Sbjct: 83 ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFF 142
Query: 174 MEVPEKF---HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+ I ++ ++NIV+++ C G LD+A + +++ V PD ITY+TL+
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCG 202
Query: 231 FYKDNRPEIGNGLWNLM---------VC-----KGCF----------------------P 254
K +R + L + M VC GCF P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
NLAT+NV + L R + ++ M ++PD +TY ++I G CRSG +D A +VY
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
S ++ L+ + +Y +++ CQ G A+ DS + ++ T + +++GL +
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDS 381
Query: 375 NQPCKANTIMALVQRRV 391
+A + L+++ V
Sbjct: 382 GMVDEAIELWDLLEKDV 398
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+FS++ +I C +G L A V +M K G KP+ Y LIS F + R
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ M GC P + T+N I L + +A+ + M G PD TY +I+G
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPSV 361
+D A ++ +L + L + ++ +IH LC G + A + D KKN P++
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + L++GL + KA T+
Sbjct: 616 VTYNTLMDGLYETGYIDKAATL 637
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I C+ +A V EM + G PD+ TY +LI + D + + +W
Sbjct: 509 VITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM-QRFGIEPDEVTYNLVIKGFCRS 304
++ KG ++ N+ I L + + +A + M ++ P+ VTYN ++ G +
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G++D A +++++ L P+ Y T I LC + + + + + +P+V T
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688
Query: 365 SALLEGLKK 373
+ L+ + K
Sbjct: 689 NILVRAVIK 697
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ NI+I C G +D+A V +M +K P+++TY TL+ Y+ +
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
LW + G P++ ++N RI+ L + R + +L+ + GI P +T+N++++
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694
Query: 301 FCRSG 305
+ G
Sbjct: 695 VIKYG 699
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 64/137 (46%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A+ + + G K V N + L + + ++ EK + ++ ++N
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ E G +DKA + + + G++PD+I+Y T I +R G L + ++ +
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR 679
Query: 251 GCFPNLATFNVRIQHLV 267
G P + T+N+ ++ ++
Sbjct: 680 GIIPTVITWNILVRAVI 696
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 131/347 (37%), Gaps = 69/347 (19%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF----HI 182
+ G + A D + YGC+ S LK L S+ ++ E+ EK +
Sbjct: 224 REGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV 283
Query: 183 QFDIFS------------------------------FNIVIKAFCEMGILDKAYLVMVEM 212
FD+ NIVI + C+ G +D A+ + M
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
G PD I+YTT++ + R L MV C PN TFN I L K
Sbjct: 344 GSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLI 403
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH-------------------------- 306
QA L+ MQ G VTYN ++ GFC GH
Sbjct: 404 EQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTG 463
Query: 307 ------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
LD A ++ + ML R PN + ++++ CQ+G + A + + M+ P+
Sbjct: 464 LCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+ T + L +G+ K+ C + + L+ V S + F SI+
Sbjct: 524 LITYNTLFDGITKD---CSSEDALELLHGLVSKGVSPDVITFSSIIG 567
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I+ C+ G + A ++ +M + G +P+V+TYT L+ A K++ E +
Sbjct: 141 DAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVL 200
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KGC PN+ T+NV I + + R A L+ + +G +PD V+Y ++KG C S
Sbjct: 201 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS 260
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D +++++ M+ + MPN + +I + C+ G
Sbjct: 261 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG 296
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 171/444 (38%), Gaps = 71/444 (15%)
Query: 6 PNRRFCHTAAAAAADAIALN---NIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE- 61
PN + H AAAAA + N N + L + RE L LV+L A RD E
Sbjct: 17 PNPKPHHLAAAAATRPESPNVAPNPASARLRRLIAREDLAGAA----RLVELSASRDGEA 72
Query: 62 -----------KLFQLFKANAHNRIV--IENKYAFEDTV---SRLAGARRFDYIEHLLEH 105
L + + + R++ E + D + +AG R+ +++
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132
Query: 106 QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
S+P ++ + G + A+ DM GC+ V + L+ + ++
Sbjct: 133 IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSG 192
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
+ A L E+ K +I ++N++I C G +D A ++ + G +PD ++YT
Sbjct: 193 FEQAMAVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYT 251
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF-------------------------- 259
TL+ R + L+ M+ K C PN TF
Sbjct: 252 TLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEH 311
Query: 260 ---------NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
N+ I + + R A K + M +G PD ++Y V+KG CR+ + A
Sbjct: 312 ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDA 371
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K++ M+ PN + T I LCQ+G A ++ + + V T +AL+ G
Sbjct: 372 KELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNG 431
Query: 371 LKKNNQ-----------PCKANTI 383
PCK NTI
Sbjct: 432 FCVQGHIDSALELFRSMPCKPNTI 455
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A++ F M CK + L L + L A + E+ + ++ +
Sbjct: 436 GHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR-DCPPNVVT 491
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN+++ FC+ G LD+A ++ +M + G P++ITY TL KD E L + +V
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLV 551
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P++ TF+ I L + R +A ++ L Q G+ P + YN ++ G C+ +D
Sbjct: 552 SKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEID 611
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A + M+ MPN Y +I L +EG
Sbjct: 612 NAIDFLAYMVSNGCMPNESTYIILIEGLAREG 643
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 4/262 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A +M YGC S LK L + + L E+ + +
Sbjct: 329 KQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRN-NCPPNE 387
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN I C+ G++++A +++ +MQ+ G V+TY L++ F + L+
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS 447
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M CK PN T+ + L N R A +L+ M P+ VT+N+++ FC+ G
Sbjct: 448 MPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGF 504
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A ++ M+ PN Y T+ + ++ A + + K P V T S+
Sbjct: 505 LDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSS 564
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
++ L K ++ +A + L Q
Sbjct: 565 IIGILSKEDRVEEAIQMFHLAQ 586
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 4/264 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G+I+ A+ M +GC V + NA + + + +P K +
Sbjct: 399 QKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP----NT 454
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ C LD A ++ EM P+V+T+ L++ F + + L
Sbjct: 455 ITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQ 514
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC PNL T+N + S A +L+ + G+ PD +T++ +I +
Sbjct: 515 MMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 574
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A +++ + P +Y ++ LC+ + + A + +P+ T
Sbjct: 575 VEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYII 634
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L+EGL + +A +++++ R
Sbjct: 635 LIEGLAREGLLKEAQDLLSMLCSR 658
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 15/224 (6%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLE---HQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
N + ++ L A R D L+ H+ P ++ + + G + A+
Sbjct: 453 NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN---FFCQKGFLDEAI 509
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
+ M +GC + + N +T+ + L + K + D+ +F+ +I
Sbjct: 510 ELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGI 568
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCF 253
+ +++A + Q +G++P + Y ++ K R EI N + L MV GC
Sbjct: 569 LSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCK--RHEIDNAIDFLAYMVSNGCM 626
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
PN +T+ + I+ L + +A L+ ++ G+ V+ NL+
Sbjct: 627 PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV----VSKNLI 666
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 55/338 (16%)
Query: 79 NKYAFE-DTVS------RLAGARRFDYIEHLLEH---QKSLPQGRREGFIMRIMMLYGKA 128
+ Y F+ DTVS L A+R++ +E L + +P ++R + +
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR---FFCRG 298
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
GM++ A+ M +GC + N L
Sbjct: 299 GMVERAIQVLEQMSGHGC-----AANTTL------------------------------- 322
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
NIVI C+ G +D A+ + M G PD I+YTT++ + R E L MV
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
K C PN TFN I L K QA L+ M G E + VTYN ++ GFC G +D
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ +M + PN Y T++ LC + A + + ++K+ P+V T + L+
Sbjct: 443 SALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + + LV++ + H + L + ++L
Sbjct: 500 SFFCQKGL---MDEAIELVEQMMEHGCTPNLITYNTLL 534
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 5/214 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A++ FY M CK + L L + L A L E+ +K ++ +
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK-DCAPNVVT 494
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN+++ FC+ G++D+A ++ +M + G P++ITY TL+ D E L + +V
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T++ I L + R +A K+ ++Q G+ P V YN ++ C+ + D
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
A ++ M+ MPN Y T+I L E DF
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANE-DF 647
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 136/349 (38%), Gaps = 50/349 (14%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
+A+ V+ + D L+ P I+R + G+ G A+ D
Sbjct: 114 FAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG---EALSLLDD 170
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M GC+ +V + L+ + +S L E+ K +I ++N++I C G
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREG 229
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF- 259
+D A + + G +PD ++YTT++ R E L+ M+ K C PN TF
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 260 ----------------------------------NVRIQHLVNKRRSWQANKLMGLMQRF 285
N+ I + + R A + + M +
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G PD ++Y V+KG CR+ + AK++ M+ + PN + T I LCQ+G A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQ-----------PCKANTI 383
++ + + ++ T +AL+ G + PCK NTI
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
+Y C + +++L + +R L+A E+ D+F++N ++ +C G L
Sbjct: 78 VYLCTKLIRNLCRRGRTSDAARVLRA--------AERSGTAVDVFAYNTLVAGYCRYGQL 129
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A ++ M V PD TYT +I R L + M+ +GC P++ T+ V
Sbjct: 130 DAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVL 186
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
++ + QA +++ M+ G P+ VTYN++I G CR G +D A++ + +
Sbjct: 187 LEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 246
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
P+ Y T++ LC + + + M+KN +P+ T L+
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G P++ I++L + R+ A +++ +R G D YN ++ G+CR G LD
Sbjct: 72 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 131
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+++ ++M + P+ Y +I LC G A + D + + PSV T + LLE
Sbjct: 132 ARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 370 GLKKNN 375
+ K+
Sbjct: 189 AVCKST 194
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 39/223 (17%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA L+ L +RD A A L++ D++ +I+ C G A V+ +
Sbjct: 47 NARLRRLI-ARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+ G DV Y TL++ + R L RR
Sbjct: 106 RSGTAVDVFAYNTLVAGY-----------------------------CRYGQLDAARR-- 134
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
L+ + PD TY +I+G C G + A + ML R P+ Y ++
Sbjct: 135 -------LIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 187
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+C+ F A + + K P++ T + ++ G+ + +
Sbjct: 188 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 110/203 (54%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D+ S I+I FC + +D + V+ ++ KLG++P+VIT++TLI+ F + +
Sbjct: 122 ISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAI 181
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+++MV +G PN+ ++++ I+ L ++ + KL+ M+ G EPD V YN ++
Sbjct: 182 ELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRL 241
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ ++ A ++ M G ++P Y ++IH L G + A+ + + N +P +
Sbjct: 242 CKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDL 301
Query: 362 DTISALLEGLKKNNQPCKANTIM 384
S L++ + K + +A I+
Sbjct: 302 VAFSVLIDIMCKEGEVSEARVIL 324
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 95/182 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+FSF+I++ +C+ +D+A + EM G+ PD ++Y TLIS + RP L+
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G PNL T+++ + L + QA L M+ G++PD VTYN++I G C+
Sbjct: 430 KDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKY 489
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A+++++ + + L PN + I +C+ G + A+ + K + P+ I
Sbjct: 490 GKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCI 549
Query: 365 SA 366
+
Sbjct: 550 NG 551
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIF 187
G I A++ F M G K V S + +K L + + I+ L+E + + D+
Sbjct: 175 GKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIK--LLEHMKVVGCEPDVV 232
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+N ++ C+ ++++A + +M+ G+ P V+TYT+LI R + GL N M
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
P+L F+V I + + +A ++ M G+EPD TYN ++ G+C +
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+KV+ M+ + MP+ + +++ C+ + A + + + +P + + L
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412
Query: 368 LEGLKKNNQPCKANTI 383
+ GL + +P +A +
Sbjct: 413 ISGLCQARRPLEAEEL 428
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 43/328 (13%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
N +++ + L + + LLEH K + I+ K ++ A+ F
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M G TV + + + L K L E+ + +I D+ +F+++I C+
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM-KGGNIMPDLVAFSVLIDIMCK 313
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G + +A +++ M ++GV+PDV TY TL++ + ++ +M+ KG P++ +
Sbjct: 314 EGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS 373
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS-------------- 304
F++ + +R +A +L M G+ PD V+YN +I G C++
Sbjct: 374 FSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMH 433
Query: 305 ---------------------GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G+LD A ++ AM L P+ Y MI +C+ G F
Sbjct: 434 SNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFK 493
Query: 344 -----LAYIMCKDSMKKNWV--PSVDTI 364
A + K NWV P++D +
Sbjct: 494 DARELFAELSVKGLQPNNWVCTPTIDGV 521
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M+ G+ DV++ T LI+ F + + G + ++ G PN+ TF+ I +
Sbjct: 116 QMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEG 175
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A +L +M G +P+ +Y+++IKG CR G K+ M P+ IY
Sbjct: 176 KIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYN 235
Query: 331 TMIHYLCQEGDFNLA-YIMCKDSMKKNWV-PSVDTISALLEGLK 372
T++ LC++ N A +I CK MK + P+V T ++L+ GL+
Sbjct: 236 TIVDRLCKDRLVNEAVHIFCK--MKGTGILPTVVTYTSLIHGLR 277
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 98/193 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N VI + C+ ++A EM G+ P+V+TY++++ F + L+
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLF 269
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + PN TF + + L + +A ++ +M G+EPD TY+ ++ G+C
Sbjct: 270 KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQ 329
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A+K++ M+G+ P+ ++Y +I+ C+ N A + + ++ P T
Sbjct: 330 SQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTY 389
Query: 365 SALLEGLKKNNQP 377
S L++G + +P
Sbjct: 390 STLMQGFCQAGRP 402
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+NI+I C+ L++A ++ EM + PD +TY+TL+ F + RP++ L+ M
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P+ T+++ + L +A +L+ MQ IEP YN++I+G C G L+
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A++++S + + + P+ Y MI L +EG N A M + + +P+ T + +
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+G +N P A + L++ V S S F+ +L
Sbjct: 534 QGFLRNGDPSNA---VRLIEEMVGRGFSADSSTFQMLL 568
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +A+ M GCK V + N + L + R F E+ ++ I ++
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ-GIPPNV 246
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ FC +G L++A + +M V P+ +T+T L+ K+ ++ +
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P+ T++ + + + +A KL +M G P YN++I G C+S
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ AK + S M R L P+ Y T++ CQ G +A + K+ +P T S
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426
Query: 367 LLEGLKKNNQ 376
LL+GL K+
Sbjct: 427 LLDGLCKHGH 436
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 99/184 (53%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F I++ C+ G++ +A V M + GV+PD TY+ L+ + ++ + L+++M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V KG P++ +N+ I RR +A L+ M + PD VTY+ +++GFC++G
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A+K++ M L+P+ Y ++ LC+ G + A+ + K + P + + L
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNIL 462
Query: 368 LEGL 371
++G+
Sbjct: 463 IQGM 466
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 2/193 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q +F ++ C + A + E+ K+G P +ITYTT+I K
Sbjct: 134 KLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTT 193
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M KGC P++ +N I L RR+ +A M GI P+ VTY+ ++
Sbjct: 194 NALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSIL 253
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GFC G L+ A ++ M+GR +MPN + ++ LC+EG L + M +N V
Sbjct: 254 HGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI-LEARRVFEMMTENGV 312
Query: 359 -PSVDTISALLEG 370
P T SAL++G
Sbjct: 313 EPDAYTYSALMDG 325
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 2/232 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G +V+ N + +SR L + L E+ ++ + D +++ +++ FC+ G
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR-DLTPDTVTYSTLMQGFCQAGRPQV 404
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G+ PD ITY+ L+ K + L M P++ +N+ IQ
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ N + A +L + GI+P VTY ++I G + G + A +++ M+ +P
Sbjct: 465 GMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP 524
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
N Y I + GD + A + ++ + + + T LL+ L+ N++
Sbjct: 525 NSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD-LESNDE 575
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVN 268
+M ++P+V T T LI+ NR + L M G P TF + L +
Sbjct: 94 QMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCS 153
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
K + A KL + + G P +TY +IKG C+ GH A ++ M + P+
Sbjct: 154 KAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVA 213
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
Y T+I LC++ N A + + + P+V T S++L G Q +A ++
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 7/198 (3%)
Query: 213 QKLGVKP--DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
Q LG++P V+ + L+ + K L M PN+ T + I L +
Sbjct: 59 QLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSN 118
Query: 271 RSWQ--ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R A +G M + G++P VT+ ++ G C + A K++ + P+
Sbjct: 119 RDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLIT 178
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y T+I LC+ G A + K +K P V + +++ L K+ +AN M
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR---RANEAMYFFS 235
Query: 389 RRVPHFSSNQLSAFKSIL 406
V + + SIL
Sbjct: 236 EMVDQGIPPNVVTYSSIL 253
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G I A F ++ G +V + N + L DL E+ K
Sbjct: 340 YTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI-KHGPDP 398
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F+F I+++ FC++G L A + EM G++PD Y T I K P G+
Sbjct: 399 DVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P+L T+NV I L +A++L+ M G+ PD VTY +I +
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
GHL A+ V+ ML + + P+ Y +IH G LA + + +K P+V T
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578
Query: 365 SALLEGLKK 373
+AL+ GL K
Sbjct: 579 NALINGLCK 587
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 125/248 (50%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
+Y K M++ + FY M G +K+ N L++L + + + V + I+
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ ++N ++ +FC+ G + +A ++++MQK+G P+ +TY L++ E L
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ G + T++ I+ K + +A++L M G P VTYN ++ G C+
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + A+K+ M+ + LMP+ Y T+I+ + G+ A+++ + + VPSV T
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 364 ISALLEGL 371
+ L++GL
Sbjct: 368 YNTLIDGL 375
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G ++ A+ M GC + N + L+ S +L+ + + E+ + ++
Sbjct: 200 FCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML-RLGLEV 258
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++ +I+ +CE G LD+A + EM G P ++TY T++ K R L
Sbjct: 259 SAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLL 318
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++MV K P+L ++N I +A L ++ G+ P VTYN +I G CR
Sbjct: 319 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRM 378
Query: 305 GHLD-----------------------------------MAKKVYSAMLGRRLMPNRKIY 329
G LD MAK+++ ML R L P+R Y
Sbjct: 379 GDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAY 438
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
T I + GD + A+ M ++ + + + P + T + ++GL K
Sbjct: 439 ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N+ I ++G L +A ++ +M G+ PD +TYT++I A ++
Sbjct: 469 DLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVF 528
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG FP++ T+ V I + R A M G+ P+ +TYN +I G C+
Sbjct: 529 LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKV 588
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A K ++ M + + PN+ Y +I+ C G + A + KD + + P T
Sbjct: 589 RKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTH 648
Query: 365 SALLEGLKKN 374
SALL+ L K+
Sbjct: 649 SALLKHLNKD 658
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 196 FCEMGILDKAYLVMVE------------------------------------MQKLGVKP 219
+ + +L+K LV + M + G++P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
V+TY T++ +F K + + L M GC PN T+NV + L + QA +L+
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M R G+E TY+ +I+G+C G LD A ++ ML R +P Y T+++ LC+
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
G + A + + KN +P + + + L+ G +
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 342
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSW--QANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KG P+L N R+ L+ R S A ++ +M GI P VTYN ++ FC+
Sbjct: 145 MVSKGMLPDLKNCN-RVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQ 203
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A ++ M +PN Y +++ L G+ A + ++ ++ S T
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTY 263
Query: 365 SALLEGLKKNNQPCKANTI 383
L+ G + Q +A+ +
Sbjct: 264 DPLIRGYCEKGQLDEASRL 282
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G +K A+ F++MH G V + NA + L + R + F E+ K I
Sbjct: 550 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK-GISP 608
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++ I+I C +G +A + +M ++PD T++ L+ KD + + L
Sbjct: 609 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLE 668
Query: 245 NLM 247
N++
Sbjct: 669 NVI 671
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 4/287 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + GMI AM+ +M GC V + N L L + + L E+ E+ +
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-GLFP 468
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ I+I C++G L A + +M++ +K DV+TY TL+ F K + +W
Sbjct: 469 DSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIW 528
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV K P +F++ + L +K +A ++ M I+P + N +IKG+CRS
Sbjct: 529 ADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRS 588
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK--NWVPSVD 362
G+ + M+ +P+ Y T+I+ +E + + A+ + K +K VP V
Sbjct: 589 GNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVF 648
Query: 363 TISALLEGLKKNNQPCKANTIM-ALVQRRVPHFSSNQLSAFKSILSK 408
T +++L G + NQ +A ++ +++R V S S +S+
Sbjct: 649 TYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQ 695
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 3/282 (1%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
R +G R + + L+ + G + ++ + +A ++ A + F + G
Sbjct: 131 RRSGVSRVEIVNSLVSTYSNC--GSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTV 188
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
++ + NA + L ++ E+ + + ++++ NI++ A C+ G ++K
Sbjct: 189 SIDACNALIGSLVRIGWVELAWRIYQEIS-RSGVGVNVYTLNIMVNALCKDGKMEKVGTF 247
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ E+Q+ GV PD++TY TLISA+ E L + M KG P + T+N I L
Sbjct: 248 LSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCK 307
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ +A ++ M R G+ PD TY ++ C+ G + ++S M R ++P+
Sbjct: 308 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVC 367
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ +M+ + G+ + A + + +P + L++G
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 126/264 (47%), Gaps = 1/264 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G ++ A + ++ G V +LN + L + ++ + FL EV EK + DI
Sbjct: 202 RIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK-GVYPDI 260
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I A+ G++++A+ +M M G P V TY T+I+ K + E ++
Sbjct: 261 VTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 320
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G P+ T+ + K + + + M+ + PD V ++ ++ F RSG+
Sbjct: 321 MLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGN 380
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A ++++ L+P+ IY +I C++G + A + + +++ V T +
Sbjct: 381 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNT 440
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
+L GL K +A+ + + R
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTER 464
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++M K G + F DM + ++ + + T S +L + V E
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I ++ + I+I+ +C G++ +A + EM + G DV+TY T++ K
Sbjct: 396 LIPDNVI-YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 454
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L+N M +G FP+ T + I A +L M+ I+ D VTYN ++ G
Sbjct: 455 DKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDG 514
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + G +D AK++++ M+ + ++P + +++ LC +G + A+ + + + K+ P+
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT 574
Query: 361 VDTISALLEG 370
V +++++G
Sbjct: 575 VMICNSMIKG 584
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 3/235 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +++AM+ F M K V + N L + D+ + ++ K + I
Sbjct: 482 KLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 541
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
SF+I++ A C G L +A+ V EM +KP V+ ++I + + G
Sbjct: 542 -SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ--RFGIEPDEVTYNLVIKGFCRS 304
M+ +G P+ ++N I V + +A L+ M+ + G+ PD TYN ++ GFCR
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+ A+ V M+ R + P+R Y ++I+ + + A+ + +++ + P
Sbjct: 661 NQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 93/187 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ F+ ++ F G LDKA + +++ G+ PD + YT LI + + L
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ +GC ++ T+N + L ++ +A+KL M G+ PD T ++I G C+
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A +++ M +R+ + Y T++ + GD + A + D + K +P+ +
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543
Query: 365 SALLEGL 371
S L+ L
Sbjct: 544 SILVNAL 550
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 3/205 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+GK G I A + + DM T S + + L L E+ K I+
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISK-SIKP 573
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ N +IK +C G + + +M G PD I+Y TLI F K+ GL
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633
Query: 245 NLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M K G P++ T+N + + + +A ++ M G+ PD TY +I GF
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRK 327
+L A + + ML R P+ K
Sbjct: 694 SQDNLTEAFRFHDEMLQRGFSPDDK 718
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 7/221 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++I+ F + L +AY ++ G + LI + + E+ ++ +
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G N+ T N+ + L + + + +Q G+ PD VTYN +I + G ++
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ AM + P Y T+I+ LC+ G + A + + ++ P T +LL
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337
Query: 369 EGLKKNNQPCKANTIMALVQRR--VPHFSSNQLSAFKSILS 407
K + I + ++ R VP L F S++S
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVP-----DLVCFSSMMS 373
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 1/263 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M GKAG A++ F +M GC N + L + + L ++ K
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK- 181
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D ++NIVI G +KAY M++ PDV+TY TL++ K R +
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 241
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ M C P+L TF I L R A + + + G P+ YN +I G
Sbjct: 242 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISG 301
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FCRSG +D +++ M+ P+ Y ++ + G ++A + ++ +++ P+
Sbjct: 302 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 361
Query: 361 VDTISALLEGLKKNNQPCKANTI 383
+ T + L+ L Q A T+
Sbjct: 362 LATYNVLIRSLSMAGQVEDAYTL 384
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+F+++ ++ A + G KA V MQK G PD + Y LIS K + + L
Sbjct: 115 LDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALEL 174
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M KG P+ T+N+ I L + R +A G+M+R PD VTYN ++ G +
Sbjct: 175 LEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKK 234
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
D A ++ M + MP+ + T+I L + G A +K VP+
Sbjct: 235 LRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYI 294
Query: 364 ISALLEGLKKNNQ 376
+AL+ G ++ Q
Sbjct: 295 YNALISGFCRSGQ 307
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHI 182
Y KAG A+D F + G CK S + + L + SR A+ F + +
Sbjct: 21 YCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAG--L 78
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ N +I C +G+L +A ++ M DV TY+ L+ A K R
Sbjct: 79 QADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALE 138
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ M GC P+ +NV I L + + +A +L+ M R GI PD TYN+VI
Sbjct: 139 VFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLS 198
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G + A + M R+ P+ Y T+++ L + + A + + +P +
Sbjct: 199 SCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT 258
Query: 363 TISALLEGLKK 373
T L++ L K
Sbjct: 259 TFGTLIDTLAK 269
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F +I + G ++ A + K+G P+ Y LIS F + + + G L+
Sbjct: 256 DLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELF 315
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ CFP+ T+ + + + + A +L+ M R G P TYN++I+ +
Sbjct: 316 QDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMA 375
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
G ++ A ++ M+ + P+ + Y +
Sbjct: 376 GQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ ++N +I +C+ G D+A + +++ G KP+ +++ TL+ K +R +
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 69
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ G ++ N I QA +L+ M D TY+ ++ +
Sbjct: 70 FQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGK 129
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G A +V+S M MP+ +Y +I L ++G + A + +D +K +P T
Sbjct: 130 AGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 189
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+ +++ L + KA + +++RR
Sbjct: 190 YNIVIDVLSSCGRYEKAYSFFGMMKRR 216
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQA-NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P++ +N I +A + L Q +P+ V+++ ++ C+ A
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
V+ MLG L + + T+IH C+ G A + +V V T S L++
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126
Query: 371 LKKNNQPCKANTIMALVQR 389
L K + KA + + +Q+
Sbjct: 127 LGKAGRAAKALEVFSNMQK 145
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 1/260 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + K G + A D DM G + N + + LK A ++++ +
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKE-AAQVIDLMAQN 311
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D++++N++I C+ G +D+A+ + EM+ L + PDV+TY TLI+ + + G
Sbjct: 312 NVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKG 371
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M KG PN T+NV ++ V + + A + M+ G PD VT+N +I G
Sbjct: 372 FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLING 431
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C++G L A ++ M + L N T++H LC E + AY + + K+ +
Sbjct: 432 YCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVD 491
Query: 361 VDTISALLEGLKKNNQPCKA 380
+ L+ G K+ + +A
Sbjct: 492 EVSYGTLIMGYFKDGKSVEA 511
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 5/272 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEK 179
++ Y K G + +A + M G + N + ++ L +AF +M+ +
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS--EAFRMMDEMSR 450
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ + + N ++ C LD AY ++ K G D ++Y TLI ++KD +
Sbjct: 451 KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVE 510
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-NKLMGLMQRFGIEPDEVTYNLVI 298
LW+ M K P++ T+N I L + ++ Q+ +KL L++ G+ PDE TYN +I
Sbjct: 511 AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES-GLVPDETTYNTII 569
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+CR G ++ A + ++ M+ + P+ ++ LC EG + A + + K
Sbjct: 570 LGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKA 629
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
T + ++ GL K ++ +A ++A ++ +
Sbjct: 630 IDAVTYNTIISGLCKEDRFEEAFDLLAEMEEK 661
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
S LK + L++ E ++ + ++N+V+K + + G +D A + +M++ G PD +
Sbjct: 366 SSSLKGFE--LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 423
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T+ TLI+ + K R + + M KG N T N + L +R+ A KL+
Sbjct: 424 TFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 483
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G DEV+Y +I G+ + G A K++ M + ++P+ Y TMI LC G
Sbjct: 484 SKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKT 543
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + + ++ VP T + ++ G + Q KA
Sbjct: 544 DQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKA 581
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG + A +M G K +LN L L R L L ++ +
Sbjct: 432 YCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF-V 490
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ +I + + G +A + EM++ + P +ITY T+I + +
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N ++ G P+ T+N I + + +A + M + +PD T N++++G C
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A K+++ + + + Y T+I LC+E F A+ + + +K P T
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
+A+L L + +A M+ +
Sbjct: 671 NAILSALADAGRMKEAEEFMSRI 693
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYL---VMVEMQKLGVKPDVITYTTLISAFYKD 234
++ H++ ++ + N +I A YL + ++ KLGVK + T+ LI +
Sbjct: 166 KRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIE 225
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N+ GL M CFP+ ++N + L K + +A L+ M+ G+ P+ T+
Sbjct: 226 NKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTF 285
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N+++ G+C+ G L A +V M ++P+ Y +I LC++G + A+ + KD M+
Sbjct: 286 NILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL-KDEME 344
Query: 355 K-NWVPSVDTISALLEG 370
+P V T + L+ G
Sbjct: 345 NLKLLPDVVTYNTLING 361
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 164 RDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+D K +AF L + E + D+ ++N +I + K + ++ +M+ GVKP+ +
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TY ++ + K+ + + M G P+ TFN I R +A ++M M
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
R G++ + VT N ++ C LD A K+ S+ R + Y T+I ++G
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKS 508
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGL 371
A + + +K +PS+ T + ++ GL
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGL 537
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYK-DNRPEI--GNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
M++L +KP+++T TLI+A + ++P + +++ ++ G N TFN+ I
Sbjct: 165 MKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCI 224
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + +A L+G M+ F PD V+YN ++ C+ G L+ A+ + M L+PNR
Sbjct: 225 ENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNT 284
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ ++ C+ G A + + N +P V T + L+ GL K+ +
Sbjct: 285 FNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 128/324 (39%), Gaps = 36/324 (11%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM------RIMMLYGKAGMIK 132
N + L G R+ D + K L + G+ + ++M Y K G
Sbjct: 456 NSVTLNTILHTLCGERKLD------DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSV 509
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
AM + +M ++ + N + L S L E+ E + D ++N +
Sbjct: 510 EAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP-DETTYNTI 568
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +C G ++KA+ +M K KPD+ T L+ + + L+N + KG
Sbjct: 569 ILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGK 628
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
+ T+N I L + R +A L+ M+ + PD TYN ++ +G + A++
Sbjct: 629 AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEE 688
Query: 313 VYSAM------------LGRRLM-----------PNRKIYQTMIHYLCQEGDFNLAYIMC 349
S + L +R + PN + I+ LC +G + A M
Sbjct: 689 FMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMV 748
Query: 350 KDSMKKNWVPSVDTISALLEGLKK 373
++S +K T +L+EGL K
Sbjct: 749 QESTQKGITLHKSTYISLMEGLIK 772
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+N ++ C+ G L++A ++++M+ G+ P+ T+ L+S + K + +
Sbjct: 246 DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM P++ T+N+ I L + +A +L M+ + PD VTYN +I G
Sbjct: 306 DLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ M G+ + PN Y ++ + +EG + A + + + P T
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 425
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+ G K + +A +M + R+
Sbjct: 426 NTLINGYCKAGRLSEAFRMMDEMSRK 451
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV---NKRRSWQANKLMGLM 282
T I A+ NRP ++N M PNL T N I LV +K + + + +
Sbjct: 144 TSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDV 203
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G++ + T+N++I G C L A + M P+ Y T++ LC++G
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKL 263
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEG 370
N A + D +P+ +T + L+ G
Sbjct: 264 NEARDLLLDMKNNGLLPNRNTFNILVSG 291
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ + A V + K
Sbjct: 95 VLEHLMKLKYFKLVWGFYKEILESGY-PASLYFFNILMHRFCKERDIRVAQSVFDAITKW 153
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M G P++ T++V I L + + A
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYG 273
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T +AL++G K
Sbjct: 274 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGD 314
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K I+ A F + +G + +V S N + DL + F L
Sbjct: 126 FFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 183
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 184 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 244 RVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 303
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 304 ALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 363
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIM 384
P T + ++ K K + ++
Sbjct: 364 GLKPDARTYTMIINEFCKKGDVWKGSKLL 392
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 6/263 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD------IF 187
A + F M C ++ + N L L + L+ A E+ ++ D +
Sbjct: 133 AQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVI 192
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++++I C+ + +A ++ M+ G PDVITYT L+ K+++ + M
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ GC PNL T+N + L RR A LM M G P+ VTY +I G C+ G +
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A + + M+ + P+ IY +I+ LC+ + + + + ++ P V T S++
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ GL ++N+ +A ++ V+ R
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSR 395
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 6/259 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A DM G + N + L ++ + A L I+ D+
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG-GIKPDV 366
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ VI C LD+A +++ ++ G PDVI Y+TLI K + + L+ +
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC ++ T++ I L R +A+ L+ M R G P +TYN +IKG C H
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP---SVDT 363
LD A ++ M P+ Y +IH +C+ + A ++ + + + ++DT
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDT 546
Query: 364 I--SALLEGLKKNNQPCKA 380
I S+L++GL K + +A
Sbjct: 547 IAYSSLIDGLCKAGRVAEA 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 5/300 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + + L A R LLE K+ +G I +++ G K + A +
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKA--RGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+M GC + + N+ L L +R + A + ++ + ++ ++ +I
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGL 306
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C++G + A ++ +M G PD++ Y LI+ K ++ + L V G P++
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ I L R +A +L+ ++ G PD + Y+ +I G C++G +D A +Y
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
M G + Y T+I LC+ G + A+++ ++ PS T ++L++GL N
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D++++ +++ FC G +D+A EM+ + P+V + LI K R
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ M G + + + L ++R QA ++ M+ G EP+ VTYN +I G C
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-------SMKK 355
++ D A++++ M P+ Y T++ L + G A + ++ M
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T S L++GL K N+ +A ++ ++ R
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 220
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 10/233 (4%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
+ + L + R D LL + KS +G I+ ++ G KAG + A D +
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKS--RGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M GC V + + + L ++ + L + + ++N +IK C++
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV-RMGTPPSTMTYNSLIKGLCDL 484
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN-----LMVCKGCFP 254
LD+A ++ EM++ P +TY LI + R + L + G
Sbjct: 485 NHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTAL 544
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ ++ I L R +A M G+ PD +TY+++++G +S L
Sbjct: 545 DTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 63/132 (47%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P++ T+ ++ QA + M+ + P+ +++I G C++ A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + AM G ++ + IY ++ L +E + A + + P+V T ++L++GL
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 372 KKNNQPCKANTI 383
KNN+P +A +
Sbjct: 125 CKNNEPDRAQEL 136
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 106/196 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + P+ +TY+TLI R + L+
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALF 359
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G PNL T+++ + +L R +A L+ ++ ++PD YN+ I G CR+
Sbjct: 360 NEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRA 419
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + R L P+ + MI LC+ G + A + ++ + + + T
Sbjct: 420 GDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTY 479
Query: 365 SALLEGLKKNNQPCKA 380
+ + +GL +NN+ +A
Sbjct: 480 NTITQGLLQNNKTSRA 495
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 7/286 (2%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
L HQ P ++R + + GK G A+D F M G + V + + L +
Sbjct: 120 LGHQ---PDTATFTTLVRGLCVVGKIG---EALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
R L E+ K I DIF++N +I A C + ++ EM K + P+V+
Sbjct: 174 DRQLTEALNLFSEMIAK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+ ++ A K+ + + + ++M+ G P++ T+ + + +A K+ +M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
R G + V+YN +I G+C+ +D A ++ M + L+PN Y T+IH LC G
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
A + + + +P++ T S LL+ L KN++ +A ++ ++
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 7/255 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + + N+ + L + K + L E+ K I ++ S N
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV-KSKIMPNVVSLN 235
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IV+ A C+ G + +A+ V+ M + GV+PDV+TY L+ + + ++++MV
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC N+ ++N I +R +A L M R + P+ +TY+ +I G C G L A
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ M+ +PN Y ++ YLC+ A + K N P V + ++G
Sbjct: 356 IALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDG 415
Query: 371 LKKNNQPCKANTIMA 385
+ C+A + A
Sbjct: 416 M------CRAGDLEA 424
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I D+++ IVI +FC + +D A V+ ++ KLG +PD T+TTL+ +
Sbjct: 83 DSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK- 141
Query: 238 EIGNGL--WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
IG L ++ MV +G PN+ T+ + L R+ +A L M GI PD TYN
Sbjct: 142 -IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYN 200
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I C + + M+ ++MPN ++ LC+EG A+ + ++
Sbjct: 201 SLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG 260
Query: 356 NWVPSVDTISALLEG 370
P V T +AL++G
Sbjct: 261 GVEPDVVTYAALMDG 275
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 99/202 (49%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF F ++ + +M + +M G+ PDV T T +I++F NR + +
Sbjct: 56 IFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLA 115
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ G P+ ATF ++ L + +A + M G +P+ VTY ++ G C+
Sbjct: 116 KILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDR 175
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L A ++S M+ + + P+ Y ++IH LC ++ + + +K +P+V +++
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235
Query: 366 ALLEGLKKNNQPCKANTIMALV 387
+++ L K + +A+ ++ ++
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMM 257
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 13/263 (4%)
Query: 54 LKAERDPE-KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH---QKSL 109
L++E D K+F + N + N ++ ++ +R D +L E Q+ +
Sbjct: 278 LRSEMDEAVKVFDMMVRNG----CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
P ++ + G+ ++ A+ F +M G + + + L L ++ L
Sbjct: 334 PNTMTYSTLIHGLCHVGR---LQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEA 390
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
A L + E ++ D+ +NI I C G L+ A + + G++PDV T+ +I
Sbjct: 391 MALLKAI-EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIR 449
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
K + + L+ M GC N T+N Q L+ ++ +A +L+ M G
Sbjct: 450 GLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSA 509
Query: 290 DEVTYNLVIKGFCRSGHLDMAKK 312
D T L++K G LD + K
Sbjct: 510 DVSTTALLVKMLSDDG-LDQSVK 531
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H+ F +N++I +C G + + L++ EM+ G P ++TY +LI+ K E
Sbjct: 1012 HVVF----YNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G PN+ +N I L N R + QA ++ M G +PD +T+N +I G
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITG 1127
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C GH+ A+ + R L PN+ Y +IH C G+ +A + + M + P
Sbjct: 1128 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1187
Query: 361 VDTISALLEGL 371
V T AL+ GL
Sbjct: 1188 VVTFGALIHGL 1198
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +N++I C+ +L A ++ EM + V+PD Y TLI F + ++
Sbjct: 1222 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P++ + N I+ +A M M++ G PDE TY VI G+ +
Sbjct: 1282 EFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L+ A + M+ R+ PN Y ++I+ C+ GD + A + + + P+V T
Sbjct: 1342 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 1401
Query: 365 SALLEGLKKNNQPCKAN 381
+ L+ L K ++ +A
Sbjct: 1402 TILIGSLFKKDKVLRAG 1418
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ +I + G L+K + +EM+K G P+V Y ++I A +
Sbjct: 1048 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1107
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC P++ TFN I L ++ +A + R + P++++Y +I GFC G
Sbjct: 1108 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1167
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L +A + M+GR P+ + +IH L G + A I+ + ++ P V+ +
Sbjct: 1168 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1227
Query: 366 ALLEGL-KKNNQPCKANTIMALVQRRV 391
L+ GL KK P N + ++++ V
Sbjct: 1228 VLISGLCKKRMLPAAKNILEEMLEKNV 1254
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 115/291 (39%), Gaps = 36/291 (12%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
AM M GC + + N + L ++ + FL E + + + S+ +
Sbjct: 1101 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRR-ELNPNQLSYTPL 1159
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I FC G L A ++VEM G PDV+T+ LI + + M +
Sbjct: 1160 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1219
Query: 253 FPNLATFNVRIQHLVNKR--------------------------------RS---WQANK 277
FP++ +NV I L KR RS A K
Sbjct: 1220 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1279
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ M+ G+ PD V+ N +IKG+C+ G + A S M +P+ Y T+I
Sbjct: 1280 IFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 1339
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
++G+ N A D +K+ P+V T S+L+ G K A + A +Q
Sbjct: 1340 KQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQ 1390
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--HIQ 183
GK G ++ F +M G V+ N+ + L R A QA ++ + + F
Sbjct: 1059 GKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCR--SATQAMVI-LKQMFASGCD 1115
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI +FN +I C G + KA + E + + P+ ++YT LI F + + L
Sbjct: 1116 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1175
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P++ TF I LV + +A + M + PD YN++I G C+
Sbjct: 1176 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1235
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
L AK + ML + + P+ +Y T+I + + A + + K P + +
Sbjct: 1236 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVS 1295
Query: 364 ISALLEG 370
+A+++G
Sbjct: 1296 CNAMIKG 1302
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 113/266 (42%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + + +M G T+ + + + L + DL+ I + +E+ K
Sbjct: 1023 YCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM-RKRGFSP 1081
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N VI A C +A +++ +M G PD+IT+ TLI+ +
Sbjct: 1082 NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1141
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + PN ++ I + A+ L+ M G PD VT+ +I G +
Sbjct: 1142 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1201
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V M R++ P+ IY +I LC++ A + ++ ++KN P
Sbjct: 1202 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1261
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++G ++ A I ++ +
Sbjct: 1262 ATLIDGFIRSENLGDARKIFEFMEHK 1287
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 2/265 (0%)
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
DT M L G T L A + ++ L V E++ ++ N ++K
Sbjct: 893 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKL 952
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
E D A + EM D + L+ + R E G L GC P+
Sbjct: 953 LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1012
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ +NV I + + L+G M+ G P VTY +I + G L+ ++
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1072
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M R PN +IY ++I LC A ++ K P + T + L+ GL
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1132
Query: 376 QPCKANTIMALVQRRVPHFSSNQLS 400
KA + RR + NQLS
Sbjct: 1133 HVRKAEHFLREAIRR--ELNPNQLS 1155
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 6/279 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLN 154
FD ++ L+ + ++ Y AGM+ A + + YG V N
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
LK+L E R + E+ K D +S ++++ C +++ ++
Sbjct: 948 RLLKLLVEQRRWDDARKLYDEMLGK-DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1006
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRS 272
G P V+ Y LI + + R ++G GL L M G P L T+ I L K
Sbjct: 1007 AGCIPHVVFYNVLIDGYCR--RGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDL 1064
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ L M++ G P+ YN VI C A + M P+ + T+
Sbjct: 1065 EKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTL 1124
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
I LC EG A ++++++ P+ + + L+ G
Sbjct: 1125 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1163
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 15/215 (6%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++ VI + + G L+ A + +M K KP+V+TY++LI+ + K + GL+
Sbjct: 1327 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLF 1386
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF--- 301
M + PN+ T+ + I L K + +A M P++VT + ++ G
Sbjct: 1387 ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 1446
Query: 302 ---------CRSGHL---DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
C + + D V+ ++ P Y +I LC+ A
Sbjct: 1447 TPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFK 1506
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
KK +VP+ T +LL G + TI+
Sbjct: 1507 NRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTIL 1541
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 36/345 (10%)
Query: 62 KLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K Q F + H+R + + +F+ + A + L+ +SL G
Sbjct: 66 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 125
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAF------- 172
+ Y AG A+ F +MH +GC + + S N L VL +S+ + KA + F
Sbjct: 126 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 185
Query: 173 --------------------------LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
L E+ E+ I ++ ++N ++K F G + A+
Sbjct: 186 SVDTVTYNVILNGWCLIKRTPKTLEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAW 244
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+EM+K + DV+TYTT++ F + +++ M+ +G P++AT+N IQ L
Sbjct: 245 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 304
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
K A + M R G EP+ TYN++I+G +G +++ M PN
Sbjct: 305 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 364
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ Y MI Y + + A + + + +P++DT + L+ G+
Sbjct: 365 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 409
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 14/293 (4%)
Query: 49 PALVKLKAER-----DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL 103
P + AER P+K +LF N H ++ +F + L ++R +E
Sbjct: 120 PKTFAIVAERYASAGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKR---VEKAY 175
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHA---MDTFYDMHLYGCKRTVKSLNAALKVL 160
E ++L +GR + ++ +IK ++ +M G + + N LK
Sbjct: 176 ELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGF 234
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ ++ F +E+ +K + D+ ++ V+ F G + +A V EM + GV P
Sbjct: 235 FRAGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 293
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY +I K + E ++ MV +G PN+ T+NV I+ L + + +LM
Sbjct: 294 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 353
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
M+ G EP+ TYN++I+ + ++ A ++ M +PN Y +I
Sbjct: 354 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 406
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 38/233 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F IV + + G DKA + + M + G D+ ++ T++ K R E L+ +
Sbjct: 122 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 181
Query: 248 VCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+G F + T+NV + +R+ + +++ M GI P+ TYN ++KGF R+G
Sbjct: 182 --RGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 239
Query: 307 --------LDM---------------------------AKKVYSAMLGRRLMPNRKIYQT 331
L+M A+ V+ M+ ++P+ Y
Sbjct: 240 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 299
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
MI LC++ + A +M ++ +++ + P+V T + L+ GL + + +M
Sbjct: 300 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 352
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G AG IK A + F +M G +V + NA ++VL + +++ E+ + + +
Sbjct: 269 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY-EP 327
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N++I+ G + +M M+ G +P+ TY +I + + + E GL+
Sbjct: 328 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 387
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRS 272
M C PNL T+N+ I + ++RS
Sbjct: 388 EKMGSGDCLPNLDTYNILISGMFVRKRS 415
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YGK G + D M G + N + + + + +++ ++ +
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ-GLSP 538
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I A C++G +D A L +M GV P+ + + +L+ ++ E L+
Sbjct: 539 NVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELF 598
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P++ FN + +L + R +A +L+ M G++PD ++YN +I G C +
Sbjct: 599 LEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFA 658
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A K+ M+ L PN Y T++H C+ G + AY + ++ ++K P V+T
Sbjct: 659 SRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718
Query: 365 SALLEGL 371
+ +L GL
Sbjct: 719 NTILNGL 725
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 14/294 (4%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQ-GRREGFIMRIMMLYG-----KAGMIKHAMDTFYDMHL 143
L +R H+L Q +P+ G R G + +L G +A + + D
Sbjct: 129 LCDTKRVGEAMHVLLRQ--MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQD 186
Query: 144 YGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
C V S N + E + KA FL + + D+ ++N +I C+ +
Sbjct: 187 SSCSPDVVSYNIVINGFFNEGQVDKAYSLFL-----EMGVSPDVVTYNTIIDGLCKAQEV 241
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D+A V +M + GVKP+ +TY T+I K ++ G++ MV KG P+ T+N
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + +A + M G++PD VTYN +I G C++ +D A+ V+ M+ + +
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
P+ Y +I LC+ + A + + + K P+ T + L+ G Q
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 3/256 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEK 179
++ Y K MI M F M G V + + L + R A+ F + E
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ + FN ++ C + +K + +EM G++PD++ + T++ K+ R
Sbjct: 571 --VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVME 628
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L + MVC G P++ ++N I R +A KL+ M G++P+ V+YN ++
Sbjct: 629 ARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLH 688
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G+C++G +D A ++ ML + + P + Y T+++ L + G F+ A + + +K +
Sbjct: 689 GYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLW 748
Query: 360 SVDTISALLEGLKKNN 375
S+ T S +L+G KNN
Sbjct: 749 SICTYSIILDGFCKNN 764
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F +M G V + N + L +++++ + ++ EK ++ + +
Sbjct: 207 GQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK-GVKPNNVT 262
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I C+ +D A V +M GVKP +TY T+I K + G++ M+
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G P+ T+N I L + +A + M G++PD +TY ++I G C++ +D
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVD 382
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ V+ M+ + + PN Y +IH G + K+ + P V T LL
Sbjct: 383 RAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLL 442
Query: 369 EGLKKNNQPCKANTIMALVQRR 390
+ L KN + +A ++ + R+
Sbjct: 443 DYLCKNGKCNEARSLFDSMIRK 464
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA + A D F M G K + N + L +++++ + ++ +K ++
Sbjct: 237 KAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK-GVKPSN 295
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I C+ +D+A V +M GVKPD +TY T+I K + G++
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG P+ T+ + I L + +A + M G++P+ TYN +I G+ +G
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + M L P+ Y ++ YLC+ G N A + ++K PSV
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 367 LLEGLKK 373
+L G K
Sbjct: 476 MLHGYGK 482
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 57/299 (19%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT----ESRDLKAIQAF---LMEVPEKFHIQ 183
+ A+ F ++ L+ +V++LN L V++ S A+ F L + K +
Sbjct: 24 LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNK--VA 81
Query: 184 FDIFSFNIVIKAFCEMGILDKAY------------------------------------L 207
D +++IVI FC +G L+ + +
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV---CKGCFPNLATFNVRIQ 264
++ +M ++G + V++Y TL+ R E L ++MV C P++ ++N+ I
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
N+ Q +K L G+ PD VTYN +I G C++ +D A+ V+ M+ + + P
Sbjct: 202 GFFNE---GQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
N Y T+I LC+ + ++A + + + K PS T + +++GL CKA +
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL------CKAQAV 311
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 1/261 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F M G N+ + L + ++ +E+ + I+ DI
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ-GIRPDI 610
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN V+ C+ G + +A ++ M +G+KPDVI+Y TLI +R + L +
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G PN+ ++N + R A L M R G+ P TYN ++ G RSG
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A+++Y M+ R + + Y ++ C+ F+ A+ + + + + T +
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790
Query: 367 LLEGLKKNNQPCKANTIMALV 387
+++GL K + A + A +
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAI 811
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 145/339 (42%), Gaps = 7/339 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG--FIMRIMMLYGKAGM 130
N V N F V L +++ +E L + L QG R F ++ K G
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELF--LEMLNQGIRPDIVFFNTVLCNLCKEGR 625
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKV-LTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A M G K V S N + SR +A++ L++ ++ +I S+
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK--LLDGMVSAGLKPNIVSY 683
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N ++ +C+ G +D AY + EM + GV P V TY T+++ ++ R L+ M+
Sbjct: 684 NTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIK 743
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
++ T+++ + +A K+ + ++ D +T+N++I G + G +
Sbjct: 744 SRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKED 803
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +++A+ L+P+ Y+ + L +EG + K P+ ++AL+
Sbjct: 804 AMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIR 863
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
L + +A ++ + + ++ S S+ S+
Sbjct: 864 KLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 130/330 (39%), Gaps = 40/330 (12%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + + L A+ D E + QK + +G + + ++ G KA + A
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVF--QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F M G K + N + L +++ + + ++ +K ++ D ++ I+I
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK-GVKPDNLTYTIIIDGL 375
Query: 197 CEMGILDKAYLVMVEMQKLGVKP-----------------------------------DV 221
C+ +D+A V +M GVKP DV
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
TY L+ K+ + L++ M+ KG P++ + + + K + + L+ L
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M GI P+ +N VI + + +D ++ M + L PN Y T+I LC+ G
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A + + + P+ ++L+ GL
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q DI +FNI+I + G + A + + G+ P V+TY + ++ E +
Sbjct: 781 LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELD 840
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+++M G PN N I+ L+++ +A + + + T +++I F
Sbjct: 841 CLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLF 900
Query: 302 CRSGHLDMAKKV 313
R + AK +
Sbjct: 901 SREEYQQHAKSL 912
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 38/346 (10%)
Query: 62 KLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K Q F + H+R + + +F+ + A + L+ +SL G
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+ Y AG A+ F +MH +GC + + S N L VL +S+ ++ + +F
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR---- 236
+ D ++N+++ +C + KA V+ EM + G+ P++ TY T++ F++ +
Sbjct: 192 SV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 237 -----------------------------PEI--GNGLWNLMVCKGCFPNLATFNVRIQH 265
EI +++ M+ +G P++AT+N IQ
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K A + M R G EP+ TYN++I+G +G +++ M PN
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ Y MI Y + + A + + + +P++DT + L+ G+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 38/233 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F IV + + G DKA + + M + G D+ ++ T++ K R E L+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 248 VCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+G F + T+NV + +R+ +A +++ M GI P+ TYN ++KGF R+G
Sbjct: 188 --RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 307 --------LDM---------------------------AKKVYSAMLGRRLMPNRKIYQT 331
L+M A+ V+ M+ ++P+ Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
MI LC++ + A +M ++ +++ + P+V T + L+ GL + + +M
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G AG IK A + F +M G +V + NA ++VL + +++ E+ + + +
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY-EP 333
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N++I+ G + +M M+ G +P+ TY +I + + + E GL+
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 393
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRS 272
M C PNL T+N+ I + ++RS
Sbjct: 394 EKMGSGDCLPNLDTYNILISGMFVRKRS 421
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I FC G A ++ EM + + P+V+TY LI+AF K+ + L+
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G PN T+N I + R A + LM G PD T+ +I G+C +
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D ++ M R L+ N Y T+IH C GD N A + + + P + T
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466
Query: 365 SALLEGLKKNNQ 376
+ LL+GL N +
Sbjct: 467 NTLLDGLCDNGK 478
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 8/242 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A+D F+ + C+ V + + L E R ++A+ A L + E +Q D ++
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAV-ALLDRMVEN-GLQPDQITY 220
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ C+MG A ++ +M+++ +KP+V+ Y+ +I KD R + L+ M
Sbjct: 221 GTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG FPN+ T+N I R A +L+ M I P+ VTYN +I F + G
Sbjct: 281 DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFF 340
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++Y ML R ++PN Y +MI C++ + A M K P V T + L+
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 369 EG 370
+G
Sbjct: 401 DG 402
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 15/274 (5%)
Query: 85 DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMH 142
DTVS L R+ + I H+ + ++ ++ G K G + + F +M
Sbjct: 232 DTVSALNLLRKMEEISHI-----------KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + N + S A Q L E+ E+ I ++ ++N +I AF + G
Sbjct: 281 DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEGKF 339
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A + EM G+ P+ ITY ++I F K +R + ++ LM KGC P++ TF
Sbjct: 340 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 399
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I +R +L+ M R G+ + VTYN +I GFC G L+ A + M+ +
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
P+ T++ LC G A M K +M+K+
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKS 492
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SF I+IK FC L A ++ KLG+ PDV+T+TTL+ D+R
Sbjct: 108 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRV 167
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ + C P++ TF + L + R +A L+ M G++PD++TY
Sbjct: 168 SEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTF 223
Query: 298 IKGFCRSGHLDMAKKVYSAMLG-RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+ G C+ G A + M + PN IY +I LC++G + ++ + + K
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 357 WVPSVDTISALLEGL 371
P++ T + ++ G
Sbjct: 284 IFPNIVTYNCMIGGF 298
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYK 233
DI + N ++ C+ G L A + MQK GV+PDV+TY LI
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + L+ M +G P+ T++ I L + R +A ++ M P+ VT
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+N +I G+C++G +D +++ M R ++ + IY T+I+ + G+ N A + ++ +
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P TI +L G + +A ++ +QR
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 22/287 (7%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM----MLYG--KAGMIKHA 134
+ F + GA+R D LL +P R G + + +++G G + A
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHE---MP---RRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFL--------MEVPEKFH-IQF 184
+D M G + + N L L ++ LK A++ F ++ F+ ++
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++NI+I G +A + EM G+ PD ITY+++I K +R + ++
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K PN+ TFN I R +L M R GI D + Y +I GF +
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G+++ A ++ M+ + P+ + M+ + + A M +D
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
+SR +A Q F+ + F ++ +FN +I +C+ G +D + EM + G+ D
Sbjct: 557 QSRLDEATQMFVSMGSKSFSP--NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
I Y TLI F K ++ M+ G +P+ T + +K +A ++
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674
Query: 282 MQRFGIEPD 290
+QR+ +E +
Sbjct: 675 LQRYQLEDE 683
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 3/215 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N ++K C+ G +D+A V EM+ L + PDV+TY TLI +K G L
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195
Query: 245 NLMVCKGCF-PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M +G PN T N+ ++ + + +A+ + M G+ PD TYN +I GFC+
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G L A ++ M + L P+ TM+H LC E AY + + K+ ++ T
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR--VPHFSS 396
L+ G K Q KA + +++R VP S
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVS 350
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 153/347 (44%), Gaps = 45/347 (12%)
Query: 102 LLEHQKSLPQGRREGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
LLE KS IM+ +GK G I A D M G + N +
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253
Query: 161 TESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
++ L +AF +M+ + ++ DI + N ++ C ++AY + V+ +K G
Sbjct: 254 CKAGKLG--EAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYIL 311
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-NKL 278
D +TY TLI ++K + + LW M +G P++ ++N I+ L ++ QA +KL
Sbjct: 312 DEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKL 371
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN---RKI------- 328
L+++ G+ PDEV+ N++I G+C G +D A + ++ M+G P+ R I
Sbjct: 372 NELLEK-GLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCR 430
Query: 329 -------------------------YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
Y TMI YLC+EG + A+ + D K + P T
Sbjct: 431 VDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYT 490
Query: 364 ISALLEGLKKNNQPCKANTIMALV----QRRVPHFSSNQLSAFKSIL 406
+A++ L + +A M+ + Q H +S +L A I+
Sbjct: 491 YNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIM 537
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 19/281 (6%)
Query: 111 QGRREGFIM------RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
+ R+ G+I+ ++M Y K A+ + +M G +V S N ++ L S
Sbjct: 303 KARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSG 362
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
L E+ EK + D S NI+I +C G++DKA+ +M KPD+ T
Sbjct: 363 KTDQAVDKLNELLEKGLVP-DEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTR 421
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
L+ + + E L+N + K ++ T+N I +L + R +A LM M+
Sbjct: 422 NILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEV 481
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM-----------LGRRLMPNRKI-YQTM 332
EPD+ TYN +++ +G + A+K S + + L + I Y
Sbjct: 482 KKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQ 541
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
I LC +G + A + ++S +K + T L++G K
Sbjct: 542 ISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLK 582
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 4/267 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + GKA A++ F TV+ NA + V + +Q L + E+
Sbjct: 182 ILAVLGKANQEALAVEIFIRAE-STVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRER- 239
Query: 181 HIQFDIFSFNIVIKAFCEMGIL--DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ D+ SFN +I A + G + + A ++ E+++ G++PD+ITY TLISA +++ E
Sbjct: 240 GCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLE 299
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M C P+L T+N I S +A +L ++ G PD VTYN ++
Sbjct: 300 EAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLL 359
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F R G++D K++ + M+ + + Y T+IH ++G LA + +D
Sbjct: 360 YAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRT 419
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMA 385
P T + L++ L K N+ +A +M+
Sbjct: 420 PDAITYTVLIDSLGKANKMVEAANVMS 446
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ F DM + C+ + + NA + V + E+ K + D ++N
Sbjct: 298 LEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFP-DAVTYN 356
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ AF G +DK + EM ++G D +TY T+I + K + + L+ M
Sbjct: 357 SLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLS 416
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T+ V I L + +A +M M G++P TY+ +I G+ R+G A
Sbjct: 417 GRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEA 476
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + M + P++ Y M+ + + A ++ ++ ++ P A+L
Sbjct: 477 EETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRN 536
Query: 371 LKKNNQ 376
L + N+
Sbjct: 537 LGRENK 542
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 118 IMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ RIM+ L K ++ +M G + + N+ L++ T D + +
Sbjct: 877 LYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRI 936
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E +Q D ++N +I +C ++ +M EM+++G++P + TY +LI+AF K
Sbjct: 937 KED-GLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQL 995
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
L+ ++ KG + + +++ ++ N +A KL+ +M+ G+EP T +L
Sbjct: 996 VVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHL 1055
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++ + SG A+KV + + L + Y ++I + D+++
Sbjct: 1056 LMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVG 1104
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI- 191
A F DM G K + KSL ++ ++ +L+++ E + FD S ++
Sbjct: 682 EASQIFSDMRFNGVKPS-KSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVA 740
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
VI+ + ++ + KA ++ +++ D + LI A+ E ++N M+ G
Sbjct: 741 VIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDG 800
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P + + N +Q L+ R + + +Q G + + + L++ F R ++ AK
Sbjct: 801 PSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAK 860
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
K+Y M P +Y+ MI LC+
Sbjct: 861 KIYQGMKAAGYFPTMHLYRIMIGLLCK 887
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 77/188 (40%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S N +++A G L++ Y+V E+Q +G + + ++ AF + + ++ M
Sbjct: 807 SINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGM 866
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G FP + + + I L +R ++ M+ G PD +N +++ +
Sbjct: 867 KAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDF 926
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
++Y + L P+ Y T+I C++ + + + P +DT +L
Sbjct: 927 RKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSL 986
Query: 368 LEGLKKNN 375
+ K
Sbjct: 987 IAAFGKQQ 994
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 26/244 (10%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS-----FNIVIKAFCEMG 200
CK K L+AALK ++R +FD F+ + +I+ E
Sbjct: 639 CK--AKQLDAALKEYNDTR------------------EFDWFTGSCTMYESLIQCCEENE 678
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+A + +M+ GVKP Y +++ + K PE + L +L +G + + +
Sbjct: 679 FTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISID 738
Query: 261 VRIQHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
V + K + WQ A L+G +++ D +N +I+ + SG + A+ V++ M+
Sbjct: 739 VAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMR 798
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
P ++ L +G Y++ ++ + S +I +L+ + + +
Sbjct: 799 DGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAE 858
Query: 380 ANTI 383
A I
Sbjct: 859 AKKI 862
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 61/133 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ ++I + + + +A VM EM +GVKP + TY+ LI + + + +
Sbjct: 421 DAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETF 480
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P+ ++V + + + +A L M R GI PD Y +++ R
Sbjct: 481 DCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRE 540
Query: 305 GHLDMAKKVYSAM 317
++ +++ M
Sbjct: 541 NKVEDIQRIIRDM 553
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + L A R++ E L+ QK P F M I L K G+++ A++
Sbjct: 262 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT-FNMLISFLCRK-GLVEPALE 319
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ YGC S N L + + + AFL ++ DI S+N ++ A
Sbjct: 320 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL-DLMVSRGCYPDIVSYNTLLTAL 378
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + + L N MV KG P++
Sbjct: 379 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 438
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ L + R A + G +Q GI P+ V YN +I G C+ A +++
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 498
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEG 340
M+G MPN Y +I L EG
Sbjct: 499 MIGNGCMPNESTYTILIEGLAYEG 522
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 4/248 (1%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L C V + NA + + L A + + E+P ++ D +++N +I+ C G
Sbjct: 119 LAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRT 174
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A V+ EM + PDV+TYT L+ A K + + L + M KGC P++ T+NV
Sbjct: 175 ANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVV 234
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ + + R A + + + +G EP+ V+YN+V+KG C + + A+++ M +
Sbjct: 235 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN + +I +LC++G A + + K P+ + + LL K + KA
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354
Query: 383 IMALVQRR 390
+ L+ R
Sbjct: 355 FLDLMVSR 362
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 4/295 (1%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
A+ V+ GA + D L+ P ++R L G+ G +A+ +M
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIR--GLCGR-GRTANALAVLDEM 184
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
C V + L+ + K L E+ +K DI ++N+V+ C+ G
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEGR 243
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A + + G +P+ ++Y ++ R E L M KGC PN+ TFN+
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L K A +++ + ++G P+ ++YN ++ FC+ +D A M+ R
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 363
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
P+ Y T++ LC+ G+ ++A + K P + + + +++GL K +
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A + +M GC V + N + L ++ L ++P K+ + S+N
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYNP 338
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ AFC+ +DKA + M G PD+++Y TL++A + ++ L + + KG
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P L ++N I L ++ +A +L+ M G++PD +TY+ + G CR ++ A
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + + + PN +Y +I LC+ + + A + + +P+ T + L+EGL
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K AM +M GC + + N + + E R AI+ FL +P + + + S+N
Sbjct: 210 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE-FLKNLP-SYGCEPNTVSYN 267
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IV+K C + A +M EM + G P+V+T+ LIS + E + +
Sbjct: 268 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 327
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN ++N + +++ +A + LM G PD V+YN ++ CRSG +D+A
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 387
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + + P Y T+I L + G A + + + K P + T S + G
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 447
Query: 371 LKKNNQ 376
L + ++
Sbjct: 448 LCREDR 453
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 138 FYDMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F D+ + GC + S N L L S ++ L ++ +K + S+N VI
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYNTVIDGL 413
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ G +A ++ EM G++PD+ITY+T+ + +++R E + + G PN
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+N I L +R + A L M G P+E TY ++I+G G + A+ +
Sbjct: 474 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533
Query: 317 MLGRRLMPNRKIYQTMIHYL 336
+ R ++ I + I L
Sbjct: 534 LCSRGVVRKSLINKGAIRLL 553
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++G + A++ + + GC + S N + LT++ K L E+ K +Q DI
Sbjct: 380 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDI 438
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ + C ++ A ++Q +G++P+ + Y +I K L+
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 498
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ GC PN +T+ + I+ L + +A L+ + G+ V +L+ KG R
Sbjct: 499 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV----VRKSLINKGAIR 551
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKW 171
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDA 231
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
NKL M + P+ VT+ +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 232 NKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A + + K P T + L++G K
Sbjct: 292 LCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGD 332
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM + P+ +T+TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QAN L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K +Q D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMK-GLQPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
Query: 131 IKHAMDTFYDMHLYGCKR---TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+ A+ F DM G T SL L +L ++ AI+ F + K I D
Sbjct: 131 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE--AIRLFYAMIHRK--IMPDQL 186
Query: 188 SFNIVIKAFCEMG---ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+FN ++ A C+ G I+DKA + EM + G+ PD +TY TLI R L+
Sbjct: 187 TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 246
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV G P+L T+ + +L R +A L+ +++ ++PD Y++V+ G CR+
Sbjct: 247 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 306
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L P+ + Y MI+ LCQ+G A + + M +N + S T
Sbjct: 307 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE-MDENDIESYSTF 365
Query: 365 S 365
S
Sbjct: 366 S 366
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I + ++ NI+I +FC + L A+ V+ ++ KLG +P T+TTLI + +
Sbjct: 37 DSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKI 96
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M +G P++ T+ I L R+ +A L M GI P+ TY+ +
Sbjct: 97 GEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL 156
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL---AYIMCKDSMK 354
I G C GH A +++ AM+ R++MP++ + T++ LC+EG + A + ++ +
Sbjct: 157 IHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQ 216
Query: 355 KNWVPSVDTISALLEGL 371
+ +P T + L+ GL
Sbjct: 217 QGLIPDTVTYNTLIHGL 233
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 5/282 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A+ F M G + V + + L + R L + ++ K I + F+
Sbjct: 94 GKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK-GISPNNFT 152
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN---GLWN 245
++ +I C +G +A + M + PD +T+ TL+ A K+ +I + GL+
Sbjct: 153 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFE 212
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G P+ T+N I L + R A L M +G PD VTY ++ C++
Sbjct: 213 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 272
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L A + + G L P+ IY ++ +C+ G+ A + K P V T +
Sbjct: 273 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 332
Query: 366 ALLEGLKKNNQPCKANTIMA-LVQRRVPHFSSNQLSAFKSIL 406
++ GL + +A+ + + + + +S+ +AFK I
Sbjct: 333 IMINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKGIF 374
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M G+ + T LI++F NR + ++ G P+ ATF I+ L +
Sbjct: 35 QMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEG 94
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ +A +L M G +PD +TY +I G C+ L A ++S ML + + PN Y
Sbjct: 95 KIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYS 154
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++IH LC G + A + + + +P T + L++ L K + M L +
Sbjct: 155 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEE 213
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P ++ ++ L+++ + L+ M G N T N+ I + R A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G + + G +P T+ +I+G C G + A +++ M G P+ Y T+I+ LC+
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A + D + K P+ T S+L+ GL
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGL 160
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ F+ + + + L M FGI + T N++I FC L A V
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+L P+ + T+I LC EG A + + + P V T L+ GL K
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 374 NNQPCKANTIMA 385
+ Q +A ++ +
Sbjct: 128 DRQLTEALSLFS 139
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 10/261 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
KAGM+ A++ F M C ++ + N + + + KA+ F EK ++ D
Sbjct: 22 KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK-RVEPD 80
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+++N +I C G + A ++ EM+ + +V TY+++I + K+ +PE +
Sbjct: 81 RWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLE 140
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ GC P++ FN +Q +A ++ M G +PD V+Y+++I G + G
Sbjct: 141 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 200
Query: 306 HLDMAKKVYS--AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
LD + K+ S AM +PN + T+IH LC+ G+ A + ++ P+ T
Sbjct: 201 KLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 260
Query: 364 ISALLEGLKKNNQPCKANTIM 384
+ L+ GL C+A ++
Sbjct: 261 YTTLIAGL------CRAEKVI 275
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M GC V + N ++ S +++ + + E + + D S++I+I ++
Sbjct: 141 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY-KPDNVSYHILIHGLAKI 199
Query: 200 GILDKAYLVMVEM--QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
G LD++ ++ EM + G P+VIT++TLI + E ++ M+ GC PN
Sbjct: 200 GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 259
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ I L + QA +L M + I PD V YN +I G+C+ G +D A+K+Y M
Sbjct: 260 TYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 319
Query: 318 L-GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
G L P + T+I C+ G A + + K T L+ GL +
Sbjct: 320 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSR 376
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F+ +I C G L+KA V M + G KP+ TYTTLI+ + + L+
Sbjct: 222 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELF 281
Query: 245 NLMV------------------CK------------------GCFPNLATFNVRIQHLVN 268
M CK G P + TFN I
Sbjct: 282 EKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCK 341
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ +AN+L+ M G+ D TY ++I G R+ LD A +VY M ++ + +
Sbjct: 342 LGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVS 401
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL---------KKNNQPCK 379
+ + LC+ G+ + AY + + + K VP+ +T L E L +K +P K
Sbjct: 402 CVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461
Query: 380 ANTIMA 385
A I A
Sbjct: 462 ARDITA 467
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 42/233 (18%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL---W 244
+++ V+++ + G+L +A V M+ P ++TY LI++ + N E G L
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINS--RCNAGEFGKALDLFQ 69
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK----- 299
++ K P+ T+N I L + + A KL+ M+ I + TY+ +IK
Sbjct: 70 SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129
Query: 300 ------------------------------GFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
GF RS +++ A++VY M+ P+ Y
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189
Query: 330 QTMIHYLCQEGDFNLAY-IMCKDSMK-KNWVPSVDTISALLEGLKKNNQPCKA 380
+IH L + G + + I+ + +M+ +VP+V T S L+ GL + + KA
Sbjct: 190 HILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKA 242
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 5/284 (1%)
Query: 107 KSLPQGRREGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
K LP + +G+ M+ + G+A M GC+ TV + N + +
Sbjct: 329 KQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANY 388
Query: 166 LK-AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
L A++ F +K + D ++ +I + G L+ A + MQ G+ PD TY
Sbjct: 389 LNDAVEVF--NQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTY 446
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ +I+ K + L+ M+ +GC PNL T+N+ I R A KL MQ
Sbjct: 447 SVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQN 506
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G EPD+VTY++V++ SG+LD A+ ++S M + +P+ +Y ++ + G+
Sbjct: 507 AGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEK 566
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEG-LKKNNQPCKANTIMALV 387
A+ + + P+V T ++LL L+ N P N + +++
Sbjct: 567 AWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSML 610
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 12/241 (4%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL------VM 209
A +VL + +D F + + + D +++ ++ GIL +A ++
Sbjct: 308 ANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMV------GILGRAKQFVAINKLL 361
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M + G +P V+TY LI ++ + N ++N M GC P+ T+ I
Sbjct: 362 DQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKA 421
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
A ++ MQ G+ PD TY+++I ++GHL A K++ M+ + +PN Y
Sbjct: 422 GFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTY 481
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
MI + ++ A + +D + P T S ++E L + +A I + ++R
Sbjct: 482 NIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKR 541
Query: 390 R 390
+
Sbjct: 542 K 542
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 115 EGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
+ F +M+ GKAG + A F +M GC + + N + + ++R+ +
Sbjct: 442 DTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLY 501
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
++ + + D +++IV++ G LD+A + EM++ PD Y L+ + K
Sbjct: 502 RDM-QNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGK 560
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
E + M+ G PN+ T N + + R A L+ M G+ P T
Sbjct: 561 AGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQT 620
Query: 294 YNLVIK 299
Y L++
Sbjct: 621 YTLLLS 626
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ L KA ++A+ + DM G + + + ++VL S L +A E+ K
Sbjct: 484 MIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKN 543
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D + +++ + + G ++KA+ M G+ P+V T +L+SAF + NR
Sbjct: 544 WVP-DEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDA 602
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L M+ G P+L T+ + + R + LM G
Sbjct: 603 YNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTG 648
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 1/204 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C+ +AY ++ EM G PD+ TYTTLI+ F K + + ++ +
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGH 306
V +G P++ T++ I L + R +A L G M + G P+ VTYN +I GFCR G
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + M P+ Y T+++ C+ + AY + +K P+V T ++
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
L++GL + N+ A I+ ++R+
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRK 259
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DIF++ +I FC+ D A V ++ G +PDV+TY+ LI K+ R + L+
Sbjct: 88 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 147
Query: 245 NLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ G C PN T+N I + +A L+ M G PD VTY ++ GFC+
Sbjct: 148 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
LD A + + M + L PN + +++ LC+E + A + + +K+ P+V T
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 267
Query: 364 ISALLEGLKKNNQ 376
+ +L+G + NQ
Sbjct: 268 YNTILDGYCRVNQ 280
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I FC MG +D+A ++ M + G PDV+TYTTL++ F K R + L
Sbjct: 159 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 218
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M KG PN+ TF + L + R A ++G M+R P TYN ++ G+CR
Sbjct: 219 NQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRV 278
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L+ A+K + PN + MI LC+ + A + +++ ++ P V
Sbjct: 279 NQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 336
Query: 365 SALLEGL---KKNNQPCK 379
+ +++ L KK ++ C+
Sbjct: 337 TTVIDVLCREKKVDEACR 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 42/318 (13%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRR 114
KAER E + L + ++ I + + + ++ +++ D + L ++ + +G R
Sbjct: 66 KAERASEA-YDLLEEMVYSG-CIPDIFTYTTLITGFCKSKKSD--DALRVFEQLVARGFR 121
Query: 115 EGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQA 171
+ ++ G K G +K A+D F M G C + N+ + +
Sbjct: 122 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 181
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L + E D+ ++ ++ FC++ LD AY ++ +M + G+ P+V+T+T+L+
Sbjct: 182 LLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGL 240
Query: 232 YKDNRPEIGNGLWNLMVCKGCFP---------------------------------NLAT 258
++NR + M K C P N+ +
Sbjct: 241 CRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPNVVS 300
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN+ I+ L RS +A +L+ +R PD V Y VI CR +D A +VY ML
Sbjct: 301 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKML 360
Query: 319 GR-RLMPNRKIYQTMIHY 335
+PN Y T ++
Sbjct: 361 EEPGCLPNSITYSTFDYW 378
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +TY +LIS K R L MV GC P++ T+ I ++S A ++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML-GRRLMPNRKIYQTMIHYLC 337
+ G PD VTY+ +I G C+ G L A ++ M+ MPN Y ++I C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ G + A + + + P V T + L+ G K
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P VTYN +I G C++ A + M+ +P+ Y T+I C+ + A +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + + + P V T S L++GL K +
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGR 139
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 51/310 (16%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
+ Q LP +M + YGK IK A D F M + G V S L
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGK---IKEARDVFDTMAMKGQNPDVFSYTIML----- 368
Query: 163 SRDLKAIQAFLMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
+ A + L+++ + F + DI++FN++IKA+ G+LDKA ++ EM+ G
Sbjct: 369 --NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ------------ 264
VKP V+TY T+I+A + + + +N M+ +G P+ ++ IQ
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486
Query: 265 -----------------------HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+L R A + L G+ PD V YN+++ G+
Sbjct: 487 ELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 546
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G ++ A +V+ AM+ + PN Y T+++ C+ G + + ++ ++K PS
Sbjct: 547 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 606
Query: 362 DTISALLEGL 371
+ +++GL
Sbjct: 607 ILYNIIIDGL 616
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 157 LKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
LK E+ R +A+ L PE + D+FS+NI++K+ C G +A ++ M +
Sbjct: 155 LKGFCEAKRTDEALDILLHRTPELGCVP-DVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 216 GV--KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
G PDV+ Y T+I F+K+ L+ MV +G P+L T++ + L R
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A + M G+ PD TYN +I G+ +G A +V+ M + ++P+ T++
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
LC+ G A + K P V + + +L G
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + + ++ + L ++R + +AFL ++ K + D
Sbjct: 233 KEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK-GVLPDN 291
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+ TL+ + K + + +++
Sbjct: 292 WTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDT 351
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ ++ + + K L LM GI PD T+N++IK + G
Sbjct: 352 MAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 411
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + P+ Y T+I LC+ G + A + + VP
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471
Query: 367 LLEGLKKNNQPCKANTIMA 385
L++G + KA +++
Sbjct: 472 LIQGFCTHGSLLKAKELIS 490
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 3/251 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQ 183
Y GM+ AM F +M +G K V + + L + A++ F + + +
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG--VV 463
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++++ +I+ FC G L KA ++ E+ G++ D++ + ++I+ K R +
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNI 523
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++L V G P+ +N+ + + +A ++ M GIEP+ V Y ++ G+C+
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +D ++ ML + + P+ +Y +I L + G A + + + + T
Sbjct: 584 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643
Query: 364 ISALLEGLKKN 374
S +L GL KN
Sbjct: 644 YSIVLRGLFKN 654
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRP-EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
++ + G++ D I + L+ F + R E + L + GC P++ ++N+ ++ L N+
Sbjct: 138 QLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQ 197
Query: 270 RRSWQANKLMGLMQRFGI--EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+S QA+ L+ +M G PD V YN VI GF + G ++ A ++ M+ R + P+
Sbjct: 198 GKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLV 257
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y +++H LC+ + A + + K +P T + L+ G Q
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 192 VIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++K FCE D+A +++ +LG PDV +Y L+ + + + L +M
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213
Query: 251 G--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G C P++ +N I + +A L M + GI PD VTY+ V+ C++ +D
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ M+ + ++P+ Y +I+ G + A + K+ +++ +P V ++ L+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 369 EGLKK 373
L K
Sbjct: 334 GSLCK 338
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVL-TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC V S N LK L + + +A M D+ ++N VI F + G ++
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 238
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD++TY++++ A K + MV KG P+ T+N I
Sbjct: 239 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLI 298
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD V N ++ C+ G + A+ V+ M +
Sbjct: 299 YGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 324 PNRKIYQTMIHYLCQEG 340
P+ Y M++ +G
Sbjct: 359 PDVFSYTIMLNGYATKG 375
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + ++ +C++G +D+ + EM + G+KP I Y +I ++ R
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G N T+++ ++ L R +A L ++ ++ D +T N +I G
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++ ++ AK +++++ L+P Y MI L +EG A M P
Sbjct: 687 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDS 746
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
++ ++ L K N+ +A ++ + R +FS L+A
Sbjct: 747 RLLNHVVRELLKKNEIVRAGAYLSKIDER--NFSLEHLTA 784
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ DI F +I C++G + A + +G+ PD + Y L+ + + E
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++ MV G PN+ + + R + L M + GI+P + YN++I G
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+G AK + M + N+ Y ++ L + F+ A + K+ N +
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T++ ++ G+ + + +A + A + R
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISR 704
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 11/250 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK ++F A I N + V+ R D E L ++ L +G + I+
Sbjct: 553 EKALRVFDAMVSAGIE-PNVVGYGTLVNGYCKIGRID--EGLSLFREMLQKGIKPSTILY 609
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
+++ G +AG A F++M G + + L+ L ++R FL +
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE-AIFLFKELR 668
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+++ DI + N +I + +++A + + + G+ P +TY+ +I+ K+ E
Sbjct: 669 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVE 728
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M GC P+ N ++ L+ K +A + + + +T L++
Sbjct: 729 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLV 788
Query: 299 -----KGFCR 303
KG CR
Sbjct: 789 DLFSSKGTCR 798
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 133/264 (50%), Gaps = 12/264 (4%)
Query: 90 LAG-ARRFDYIEHLLEHQKS----LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
LAG R+FD L++ K+ +P E F + ++ Y KAG+ A+ F M Y
Sbjct: 155 LAGKVRQFDLAWQLIDLMKTRNVEIPV---ETFTI-LVRRYVKAGLAAEAVHAFNRMEDY 210
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GCK + + + L++ R Q+F + ++F + D+ + ++ +C G + +
Sbjct: 211 GCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF--EPDVVVYTSLVHGWCRAGNISE 268
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V EM+ G++P+V TY+ +I A + + + +++ M+ GC PN TFN ++
Sbjct: 269 AERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 328
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V R+ + ++ M+R G PD +TYN +I+ CR +L+ A K+ ++ + +
Sbjct: 329 VHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNL 387
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIM 348
N + + + + GD N A+ M
Sbjct: 388 NASSFNPIFGCISKLGDVNSAHRM 411
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
+++ G P+ Y +I K + ++ L +LM + + TF + ++ V
Sbjct: 139 LEEFGHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGL 196
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ +A M+ +G +PD++ +++VI + A+ + + L R P+ +Y +
Sbjct: 197 AAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDS-LKDRFEPDVVVYTS 255
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
++H C+ G+ + A + + P+V T S +++ L ++ Q +A+ + +
Sbjct: 256 LVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 309
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M GC V S N LK L ESR +A++ M + D+ S++ +I +
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKE 219
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G DKAY EM + G+ PDV+TY T+++A K + + N MV G P+ T+
Sbjct: 220 GDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITY 279
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N + + +S +A ++ M G+EPD VTY ++ C++G A+K+ +M+
Sbjct: 280 NSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIK 339
Query: 320 RRLMPNRKIYQTMIHYLCQEG 340
R L PN Y T++H +G
Sbjct: 340 RGLKPNVITYSTLLHGYATKG 360
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 19/253 (7%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
KRT ++N L+ +TE L P +FS+NI++K C +A
Sbjct: 147 KRTSNAMNIVLRRMTE----------LGCAPH-------VFSYNILLKGLCHESRSQEAL 189
Query: 207 LVMVEMQKLG--VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
++ M G PDV++Y+T+I +K+ + ++ M+ +G P++ T+N +
Sbjct: 190 ELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVA 249
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + +A ++ M + G+ PD +TYN ++ G+C SG A + M + P
Sbjct: 250 ALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEP 309
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ Y +++ YLC+ G A + +K+ P+V T S LL G + ++
Sbjct: 310 DAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLL 369
Query: 385 ALVQRRVPHFSSN 397
L+Q +S
Sbjct: 370 DLMQNEAAKINSG 382
>gi|168040538|ref|XP_001772751.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675976|gb|EDQ62465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 526
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 4/290 (1%)
Query: 86 TVSRLAG-ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
T+ RL G ARRFDY+ LL+ K + ++ Y KA I+ ++ TF+ M Y
Sbjct: 4 TMLRLLGDARRFDYLWALLDDMKRDGHRVTPTIFLGVIRSYVKANQIEDSLKTFHAMDKY 63
Query: 145 GCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
CK T N+ + +L S D ++A + F P D ++ ++I + G +
Sbjct: 64 DCKPTTLVYNSMIDILRTSGDYVQAEKLFRSMNPSS--CAPDTITYTMMIDCMGKAGHIQ 121
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A+ + EM ++G K +VITY++LI + K R L + M GC PN T+N I
Sbjct: 122 AAFDLFQEMHRMGYKANVITYSSLIRSLCKAGRISEACNLLSGMRINGCNPNDVTYNGLI 181
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L ++ M+ FG+ P+ T +VI R G L A ++ +
Sbjct: 182 VGLGGAGQADLVCSYYKEMKSFGLIPNLPTQAVVISSLVRIGKLSEAHSLFQTAALKSST 241
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ + ++++ LC+ + + +D+ K +VPS S L+ L K
Sbjct: 242 FDFDVMKSVVGSLCKSNRCEVGFKFFQDAKKSGYVPSSGACSVLIYSLSK 291
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K GM+ A+ + + G + +LNA L + L+A ++ K I D
Sbjct: 291 KVGMVAEALCVYGESTRGGVSPDLMALNALTNSLVKEEKLEA-AIDVVRFINKHRIGDDA 349
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ C+ + ++ E+ K G P+V Y LI + R +
Sbjct: 350 YAHERLVDLLCKTHRFED--VISQELPKQGFAPNVHLYNKLIYQLGEAGRINDALKTFER 407
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + C+P+ T+NV I L + A++L M+ G +P+ TYN+++ R+G
Sbjct: 408 MCSESCYPDTRTYNVVINLLGGVGKVDLAHQLFEQMKEKGCKPNLQTYNIMVGHLVRAGR 467
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+ K+ M+ + P + + + G + + C D +K +
Sbjct: 468 YQLGPKLCREMVANHIEPREGALKILQFHEKASGGHDELAMTCMDILKGD 517
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
L++L ++R + A L ++ H + F VI+++ + ++ + M K
Sbjct: 6 LRLLGDARRFDYLWALLDDMKRDGH-RVTPTIFLGVIRSYVKANQIEDSLKTFHAMDKYD 64
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
KP + Y ++I L+ M C P+ T+ + I + A
Sbjct: 65 CKPTTLVYNSMIDILRTSGDYVQAEKLFRSMNPSSCAPDTITYTMMIDCMGKAGHIQAAF 124
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L M R G + + +TY+ +I+ C++G + A + S M PN Y +I L
Sbjct: 125 DLFQEMHRMGYKANVITYSSLIRSLCKAGRISEACNLLSGMRINGCNPNDVTYNGLIVGL 184
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
G +L K+ +P++ T + ++ L + + +A+++ + F
Sbjct: 185 GGAGQADLVCSYYKEMKSFGLIPNLPTQAVVISSLVRIGKLSEAHSLFQTAALKSSTFDF 244
Query: 397 NQLSAFKSILSKS 409
+ + + L KS
Sbjct: 245 DVMKSVVGSLCKS 257
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD-------------NR 236
+++I + ++G++ +A V E + GV PD++ L ++ K+ N+
Sbjct: 283 SVLIYSLSKVGMVAEALCVYGESTRGGVSPDLMALNALTNSLVKEEKLEAAIDVVRFINK 342
Query: 237 PEIGNGLWNL-----MVCK---------------GCFPNLATFNVRIQHLVNKRRSWQAN 276
IG+ + ++CK G PN+ +N I L R A
Sbjct: 343 HRIGDDAYAHERLVDLLCKTHRFEDVISQELPKQGFAPNVHLYNKLIYQLGEAGRINDAL 402
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
K M PD TYN+VI G +D+A +++ M + PN + Y M+ +L
Sbjct: 403 KTFERMCSESCYPDTRTYNVVINLLGGVGKVDLAHQLFEQMKEKGCKPNLQTYNIMVGHL 462
Query: 337 CQEGDFNLAYIMCKDSMKKNWVP 359
+ G + L +C++ + + P
Sbjct: 463 VRAGRYQLGPKLCREMVANHIEP 485
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 3/242 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I A + M + GC + N + L + + ++ E+ + F + ++
Sbjct: 151 KAGRISEACNLLSGMRINGCNPNDVTYNGLIVGLGGAGQADLVCSYYKEM-KSFGLIPNL 209
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +VI + +G L +A+ + D +++ + K NR E+G +
Sbjct: 210 PTQAVVISSLVRIGKLSEAHSLFQTAALKSSTFDFDVMKSVVGSLCKSNRCEVGFKFFQD 269
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
G P+ +V I L +A + G R G+ PD + N + +
Sbjct: 270 AKKSGYVPSSGACSVLIYSLSKVGMVAEALCVYGESTRGGVSPDLMALNALTNSLVKEEK 329
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A V + R+ + ++ ++ LC+ F ++ ++ K+ + P+V +
Sbjct: 330 LEAAIDVVRFINKHRIGDDAYAHERLVDLLCKTHRFE--DVISQELPKQGFAPNVHLYNK 387
Query: 367 LL 368
L+
Sbjct: 388 LI 389
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 5/317 (1%)
Query: 92 GARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVK 151
G + ++ L E K+ + G I++ K G + A F M GCK
Sbjct: 483 GGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542
Query: 152 SLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
+ N + L SR+ + +AF L+ E D ++ + C++G +D+A ++
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLE 602
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
E G DV+ YT L + + + L+ MV +G P+ A + I L+ +
Sbjct: 603 EASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGK 662
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIY 329
+ A K M G +P TY +++ C +G++D A + ML R L+ + IY
Sbjct: 663 KLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIY 722
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+IH C+ + A + +D + + VP+ T ++L +GL ++ + KA L+Q
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE---LLQE 779
Query: 390 RVPHFSSNQLSAFKSIL 406
S + F +IL
Sbjct: 780 MAAGGSPPHAATFTAIL 796
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTT 226
A+ F E+ ++ + D+ +F I++ C+ G+ +KA+ V EM +G V PD +T
Sbjct: 173 AVTCF--EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
++ K R + ++ M G P+ +N I L + +A K++ M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
P EVTY +++ C++G L+ A++++ M PN IY ++IH + G A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + ++ + P V T + +++GL K+
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
KAG + A+ +M C T + + L ++ L +A + F + F
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I++ +I F + G + +A + EM + G +PDVIT+T +I K E +
Sbjct: 332 IYTS--LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ GC PN+ T+ IQ L R A ++M M G PD VTY ++ GFC+ G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
LD A ++ + PN ++Y +++ LC G
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAGM + A + F++M G ++L+ A+ + L +++ +K + ++ EK D
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPD 259
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I + G +A V+ M P +TY L+++ K E L+
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M G PN + I R +A L M G PD +T+ ++I G C+SG
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + A K + M+ PN Y T+I L + G A+ + K + P T
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439
Query: 366 ALLEGLKK 373
LL+G K
Sbjct: 440 CLLDGFCK 447
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA +K A + F M G + N + L ++ + L + K + ++
Sbjct: 237 KAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I++ + C+ G L++A + M G +P+ + YT+LI F K R + L++
Sbjct: 297 -TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P++ T V I L QA K M R G +P+ VTY +I+G + G
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ M+ P+ Y ++ C+ G + A + + K + P++ S+
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 367 LLEGL 371
L++GL
Sbjct: 476 LVKGL 480
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A V +M+K G PD I Y T+I K + + + M+ K C P T+ + +
Sbjct: 243 EAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILV 302
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L +A +L +M G P+ V Y +I GF +SG + A ++ M+
Sbjct: 303 NSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYR 362
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ + MI LC+ G+F A ++ M+ P+V T + +++GL K + A I
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRI 422
Query: 384 M 384
M
Sbjct: 423 M 423
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I + FSFNI+I++F D A M++ KPD+ T+ L+ K E
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206
Query: 239 IGNGLWNLMVCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+++ M+ G P + A ++ L+ +R +A ++ G M++ G PD + YN +
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G ++GH A KV ML + +P Y +++ LC+ G A + + +
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326
Query: 358 VPSVDTISALLEGLKKNNQ 376
P+ ++L+ G K+ +
Sbjct: 327 RPNSVIYTSLIHGFAKSGR 345
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 39/285 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ A + F M G + + + +S +K + E+ E + + D+
Sbjct: 307 KAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY-RPDV 365
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++I C+ G ++A EM + G KP+V+TYTT+I K R +
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK------- 299
M+ GCFP+ T+ + R +A +L+ + + P+ Y+ ++K
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGS 485
Query: 300 -----------------------------GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
G C++G LD A +++ M+ P+ Y
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 331 TMIHYLC--QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+I+ LC +E A+ + D ++P T + L GL K
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCK 590
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 21/366 (5%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
+L K E+LF++ A+ N + + A + R L + +
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFR----PNSVIYTSLIHGFAKSGRMKEACSLFDEM--V 357
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
G R I +M+ G K+G + A +F +M GCK V + ++ L S+ +
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL--SKIGR 415
Query: 168 AIQAFLMEVPEKFHIQF-DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
AF + H F D ++ ++ FC++G LD+A ++ E+ K P++ Y++
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 227 LISAFYKDNRPEIGNGLWNLM-VCKGCFPNL--ATFNVRIQHLVNKRRSWQANKLMGLMQ 283
L+ E N L +L K NL I L R +A ++ M
Sbjct: 476 LVKGLCDGGSVE--NTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 284 RFGIEPDEVTYNLVIKGFCRS--GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G +PD TYN++I G CRS ++ A + + +P+ Y + LC+ G+
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
+ A M +++ + W V +AL GL Q +A ++L Q V + +A
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA---VSLFQEMVRQGGAPDAAA 650
Query: 402 FKSILS 407
+ I++
Sbjct: 651 YCCIIN 656
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +SF ++ + MG ++KA+ VM EM PD I+YT I A Y R E ++
Sbjct: 304 DTYSF--IVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVF 361
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KGC P++ T+ + I + + A ++ LM + ++P+ Y +++ GF +S
Sbjct: 362 ETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKS 421
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM--KKNWVPSVD 362
L+ A ++Y +L ++P+ Y T+I+ LC+ + A + ++ K+ PS+
Sbjct: 422 SRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV 481
Query: 363 TISALLEGLKKNNQPCKANTIMA 385
T S ++ GL K +A ++A
Sbjct: 482 TYSMIIHGLGKVGMEERAFDLLA 504
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 2/193 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I FC+ G + A V+ M K VKP+ YT ++ F K +R E L+
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG--IEPDEVTYNLVIKGFC 302
++ G P+ T+N I L ++ +A +L+ MQR +EP VTY+++I G
Sbjct: 432 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 491
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A + + M+ ++P+ Y ++I L G + A + ++ +K P
Sbjct: 492 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 551
Query: 363 TISALLEGLKKNN 375
T L++ L +++
Sbjct: 552 TYGTLVQILCRSD 564
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 157 LKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L RDL KA+ F P K + +F++ +++ C+ +++A V EM +
Sbjct: 170 LSALCARRDLDKAVSYFNSVSPNK--CEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRK 227
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G KPD+I Y++LI K R + L +LMV +G P + + L R +A
Sbjct: 228 GYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEA 287
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
K + M+R + P TY+ ++ G+ G ++ A V M R P+ Y I
Sbjct: 288 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEA 347
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
L G A + + ++K P + T +++ K A ++ L+ +
Sbjct: 348 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 401
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL----KAIQAFLMEVPEKFHI 182
KA ++ A D F +M G K + + ++ + L+++ + K + + P +
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
++ ++ C+ G + +A + EM++ ++P V TY+ +++ + + E
Sbjct: 270 -----AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFA 324
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ M + C P+ ++ + I+ L + R +A K+ M G +PD TY ++I FC
Sbjct: 325 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 384
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A V M + PNR IY ++ + A + + +K +PS
Sbjct: 385 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 444
Query: 363 TISALLEGLKKNNQPCKANTIMALVQRR 390
T + ++ L K + +A ++ +QRR
Sbjct: 445 TYNTVINALCKLKKMDEALELLREMQRR 472
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ SFNI+++ F + ++ EM+ G+ + T+ ++SA + +
Sbjct: 127 NVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYF 186
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + C P L T+ V + L + +A + M R G +PD + Y+ +I G ++
Sbjct: 187 NSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKA 246
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A+K+ M+ R P Y +++ LC+ G A ++ ++ P VDT
Sbjct: 247 GRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 306
Query: 365 SALLEGLKKNNQPCKANTIM 384
S ++ G + KA +M
Sbjct: 307 SFIVTGYIGMGKVEKAFAVM 326
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V S N L+ D + + A L E+ + I + + +++ A C LDKA
Sbjct: 128 VSSFNILLRGFAARDDFEVVNALLREMKSR-GITSNGATHGVILSALCARRDLDKAVSYF 186
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+ +P + TYT L+ K ++ E ++ M+ KG P++ ++ I L
Sbjct: 187 NSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKA 246
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R +A KL+ LM G P V Y ++ G C+ G + A K M RRL P Y
Sbjct: 247 GRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 306
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ G A+ + ++ ++ P + + +E L
Sbjct: 307 SFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEAL 348
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQ--KLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N VI A C++ +D+A ++ EMQ K ++P ++TY+ +I K E L
Sbjct: 445 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLA 504
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P+ T+ IQ L + +A +L+ M + GI PD+ TY +++ CRS
Sbjct: 505 EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS- 563
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+D A + M+ PN ++ +
Sbjct: 564 DVDAAWDLLQEMMRNGHTPNEFTFKAV 590
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE-K 179
IM + K+ ++ A++ + + G + + N + L + + + L E+ K
Sbjct: 414 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 473
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ I +++++I ++G+ ++A+ ++ EM GV PD TYT+LI +
Sbjct: 474 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 533
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLV--NKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L M+ G FP+ T+ +Q L + +W L+ M R G P+E T+ V
Sbjct: 534 AMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWD---LLQEMMRNGHTPNEFTFKAV 590
Query: 298 IKGF 301
KGF
Sbjct: 591 EKGF 594
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+++FN+ ++ + N L+ M+ GI + T+ +++ C LD A
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSY 185
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++++ + P Y ++ LC+ A + ++ ++K + P + S+L++GL K
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245
Query: 374 NNQPCKANTIMALVQRRVP 392
+ +A ++ L+ R P
Sbjct: 246 AGRVDEARKLVDLMVARGP 264
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI-------MRIMMLYGKAGMIKH 133
+A+ +S A R + + +L+ K R+GF + I GK G I
Sbjct: 45 FAYNAVISGFCKANRIESAKTVLDRMK------RKGFSPDVVTHNIMIGTFCGK-GKIDL 97
Query: 134 AMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ F ++ CK T+ + ++ + L E+ + ++ D F++N++
Sbjct: 98 ALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR-GLEPDTFTYNVI 156
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ C+ G +D+A+ + + G KPDVITY L+ A + + G + + +GC
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGC 216
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN+ T+++ I L + ++ L+ +M+ G+ PD Y+ +I FCR G LDMA +
Sbjct: 217 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIE 276
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
M+ +P+ Y T++ LC+ G+ + A + + P+V + + +L L
Sbjct: 277 FLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ V + + + L RD K ++ L++V ++ + D + ++ +I AFC G LD
Sbjct: 215 GCEPNVVTYSILISSLC--RDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLD 272
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + M G PD++ Y T+++A K+ + ++ + GC PN++++N +
Sbjct: 273 MAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTML 332
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + ++A ++ M GI+PD +TYN +I CR G +D A + + ML R
Sbjct: 333 SALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQ 392
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN Y+T++ LC+ + A + ++ P+ T + L+EG+
Sbjct: 393 PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 122/257 (47%), Gaps = 7/257 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + ++ GCK V + N L+ L + ++ E+ + + ++
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR-GCEPNV 220
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++I+I + C G ++++ ++ M++ G+ PD Y LI+AF ++ + ++ +
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+C G P++ +N + L A ++ G + G P+ +YN ++ SG
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A + S ML + + P+ Y ++I LC++G + A + D + + P++ +
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400
Query: 367 LLEGLKKNNQPCKANTI 383
+L GL CKA+ I
Sbjct: 401 VLLGL------CKAHRI 411
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 2/205 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+M + EK H + D+F++N VI FC+ ++ A V+ M++ G PDV+T+ +I F
Sbjct: 32 VMGILEK-HGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFC 90
Query: 233 KDNRPEIGNGLWN-LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ ++ ++ L+ C P L T+ + I+ + + +A KL+ M G+EPD
Sbjct: 91 GKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDT 150
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
TYN++ +G C+ G +D A + + R P+ Y ++ L +G ++ +
Sbjct: 151 FTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSE 210
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
+ P+V T S L+ L ++ +
Sbjct: 211 IFSRGCEPNVVTYSILISSLCRDGK 235
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 96/191 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ I+I+A+ G +D+A ++ EM G++PD TY + K+ + +
Sbjct: 115 LITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVR 174
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +GC P++ T+N+ ++ L+N+ + + K M + G EP+ VTY+++I CR G
Sbjct: 175 TLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDG 234
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ + + M + L P+ Y +I C+EG ++A + ++P + +
Sbjct: 235 KIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYN 294
Query: 366 ALLEGLKKNNQ 376
++ L KN
Sbjct: 295 TIMAALCKNGN 305
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 7/224 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++NI+++A G D+ M E+ G +P+V+TY+ LIS+ +D + E L
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M KG P+ ++ I + + A + + M G PD V YN ++ C++
Sbjct: 244 KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKN 303
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ D A +++ + PN Y TM+ L GD A M + K P V T
Sbjct: 304 GNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITY 363
Query: 365 SALLEGLKKNNQPCKANTIMA--LVQRRVPHFSSNQLSAFKSIL 406
++L+ L ++ +A ++A L R P+ S +K++L
Sbjct: 364 NSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVS-----YKTVL 402
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
IM K G HA++ F + GC V S N L L S D + ++ K
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSK- 354
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+ ++N +I C G++D+A ++ +M +P++++Y T++ K +R +
Sbjct: 355 GIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDA 414
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
+ M+ GC PN T+ + I+ + QA +L
Sbjct: 415 IEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N ++ A G +A ++ +M G+ PDVITY +LIS +D + GL
Sbjct: 324 NVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLL 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ PN+ ++ + L R A +++ M G +P+E TY L+I+G S
Sbjct: 384 ADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFS 443
Query: 305 GH----LDMAKKVY 314
G +++A +Y
Sbjct: 444 GSRTQAMELANSLY 457
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV K P++ I+ N R +A ++MG++++ G +PD YN VI GFC++
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTIS 365
++ AK V M + P+ + MI C +G +LA + ++ +K N P++ T +
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 366 ALLE 369
L+E
Sbjct: 120 ILIE 123
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+++ D+ + I+I + +G ++ A V M K G+ P+V TY LI+ F +
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+GL + M KG ++ T+NV I L K +A KL+ M G+EP+ +TYN +I+G
Sbjct: 424 SGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC G++ A ++ + M R N Y I Y CQ G + A + + + K VP+
Sbjct: 484 FCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPN 543
Query: 361 VDTISALLEGL 371
T + EG+
Sbjct: 544 GITYETIKEGM 554
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE---SRDLKAIQAFLMEVPEKFHIQ 183
+ G ++ A D D+ +G +V + N+ + + + ++ + L E+ E I
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA-GIS 261
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+F ++I +C+ A V EM++ G+ V+TY +LIS + + E G L
Sbjct: 262 PTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKL 321
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G PN TF ++ K AN + M +EPD V Y ++I G+ R
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRR 381
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++ A V AM + + PN Y +I + GD+ A + + +K V T
Sbjct: 382 LGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVT 441
Query: 364 ISALLEGL 371
+ L+ L
Sbjct: 442 YNVLIGAL 449
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 186 IFSFNIVIKAFCEMGILDKAY---LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++N +I +C+ G Y +++ EM + G+ P +T+ LI+ + K++
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVR 285
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++ M +G ++ T+N I L ++ + + KLM M+ G+ P+E+T+ V+KGFC
Sbjct: 286 VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFC 345
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A M R + P+ IY +I + G A + + KK P+V
Sbjct: 346 KKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVT 405
Query: 363 TISALLEGLKKNNQ 376
T + L+ G ++
Sbjct: 406 TYNCLITGFSRSGD 419
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ AM M G V + N + + S D ++ L E+ EK I+
Sbjct: 379 YRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-GIEA 437
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N++I A C G + KA ++ EM ++G++P+ +TY T+I F
Sbjct: 438 DVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD----------- 486
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
KG N++ + + R M++ + VTYN+ IK FC+
Sbjct: 487 -----KG--------NIKSAYEIRTR-----------MEKCRKRANVVTYNVFIKYFCQI 522
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +D A + + ML + L+PN Y+T+ + ++G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 1/246 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G AG + H +M G T + + ++ + A E+ ++ I
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQ-GIAAS 298
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++N +I C G +++ +M EM+ LG+ P+ IT+ ++ F K N +
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M + P++ + + I + A + M + GI P+ TYN +I GF RSG
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M + + + Y +I LC +G+ A + + + P+ T +
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 366 ALLEGL 371
+++G
Sbjct: 479 TIIQGF 484
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ ++ N + LV +R A K R + PD T+N VI G CR G L A V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY---IMCKDSMKKNWVPSVDTISALLEG 370
+ L P+ Y ++I C++G Y ++ K+ ++ P+ T L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 371 LKKNNQPCKA 380
KN+ A
Sbjct: 274 YCKNSNTAAA 283
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
+P + L++ R ++ + + + P++ TFN I L + +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSG------HLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +G+ P TYN +I G+C+ G H+DM K M+ + P +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK---EMVEAGISPTAVTFGV 269
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I+ C+ + A + ++ ++ SV T ++L+ GL
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + +L + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ GHL+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K G++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E + G + + L
Sbjct: 85 AIECYRLTKEHKFRVPFD--TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNIL 142
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ +F K+ + +++ + G P++ +FN + + + +L MQ G+
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGV 202
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML L+PN + T+I C+ G +LA
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAME 262
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ K + ++ P + T + L+ GL K
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 26/259 (10%)
Query: 132 KHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-DIFSF 189
+H + ++ M H + + ++++ + + A + E Q DI+ F
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVF 69
Query: 190 NIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFYKDNRP 237
+ +I A+ E G L A + + K V D + Y L+ FY+++
Sbjct: 70 SGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEES-- 127
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ C G +L FN+ + V + A + + ++G+ P V++N +
Sbjct: 128 ---------LEC-GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+ + G+LD ++ +AM + P+ Y +I+ LC+E + A + + +
Sbjct: 178 MNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237
Query: 358 VPSVDTISALLEGLKKNNQ 376
VP+ T + L++G KN +
Sbjct: 238 VPNGVTFTTLIDGHCKNGR 256
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC V S N LK L ESR +A++ M + D+ S++ +I + G D
Sbjct: 164 GCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSD 223
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KAY EM + G+ PDV+TY T+++A K + + N MV G P+ T+N +
Sbjct: 224 KAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIV 283
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ +S +A ++ M G+EPD VTY ++ C++G A+K+ +M+ R L
Sbjct: 284 HGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLK 343
Query: 324 PNRKIYQTMIHYLCQEG 340
PN Y T++H +G
Sbjct: 344 PNVITYSTLLHGYATKG 360
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
KRT ++N L+ +TE L P +FS+NI++K C +A
Sbjct: 147 KRTSNAMNIVLRRMTE----------LGCAPH-------VFSYNILLKGLCHESRSQEAL 189
Query: 207 LVMVEMQKLG--VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
++ M G PDV++Y+T+I +K+ + ++ M+ +G P++ T+N +
Sbjct: 190 ELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVA 249
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + +A ++ M + G+ PD +TYN ++ G+C SG A + M + P
Sbjct: 250 ALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEP 309
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ Y +++ YLC+ G A + +K+ P+V T S LL G
Sbjct: 310 DAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHG 355
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 96/192 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N ++ A C+ +DKA V+ M K GV PD ITY +++ + + + G+
Sbjct: 240 DVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGIL 299
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+ T+ + +L R +A K++ M + G++P+ +TY+ ++ G+
Sbjct: 300 EKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATK 359
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L + + M+ + P+R ++ +I + + ++A + ++ P V T
Sbjct: 360 GALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTY 419
Query: 365 SALLEGLKKNNQ 376
L++GL K+ +
Sbjct: 420 GTLIDGLCKSGR 431
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 47/284 (16%)
Query: 150 VKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD----- 203
++SLN AL + A+ F M + + ++ I+I C G LD
Sbjct: 61 IRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAG 120
Query: 204 ------KAY-------------------------LVMVEMQKLGVKPDVITYTTLISAFY 232
K Y +V+ M +LG P V +Y L+
Sbjct: 121 LGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLC 180
Query: 233 KDNRPEIGNGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
++R + L ++M G C P++ +++ I L + S +A M GI PD
Sbjct: 181 HESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPD 240
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAY 346
VTYN ++ C++ +D A V + M+ +MP+ Y +++H C G +
Sbjct: 241 VVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILE 300
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
MC D ++ + V T ++L++ L KN + +A I+ + +R
Sbjct: 301 KMCSDGVEPDAV----TYTSLMDYLCKNGRCIEARKILDSMIKR 340
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G A T+++M G V + N + L +++ + L + K + D
Sbjct: 218 KEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRM-VKNGVMPDC 276
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ +C G +A ++ +M GV+PD +TYT+L+ K+ R + +
Sbjct: 277 ITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDS 336
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE--------------- 291
M+ +G PN+ T++ + K + L+ LM R GI+PD
Sbjct: 337 MIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQN 396
Query: 292 --------------------VTYNLVIKGFCRSGHLDMA 310
VTY +I G C+SG +D A
Sbjct: 397 VDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I FC G A ++ EM + + P+V+TY LI+AF K+ + L+
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G PN T+N I + R A + LM G PD T+ +I G+C +
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 406
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D ++ M R L+ N Y T+IH C GD N A + + + P + T
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 466
Query: 365 SALLEGLKKNNQ 376
+ LL+GL N +
Sbjct: 467 NTLLDGLCDNGK 478
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 8/242 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+ A+D F+ + C+ V + + L E R ++A+ A L + E +Q D ++
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAV-ALLDRMVEN-GLQPDQITY 220
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ C+MG A ++ +M+++ +KP+V+ Y+ +I KD R + L+ M
Sbjct: 221 GTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG FPN+ T+N I R A +L+ M I P+ VTYN +I F + G
Sbjct: 281 DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFF 340
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++Y ML R ++PN Y +MI C++ + A M K P V T + L+
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 369 EG 370
+G
Sbjct: 401 DG 402
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 15/274 (5%)
Query: 85 DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMH 142
DTVS L R+ + I H+ + ++ ++ G K G + + F +M
Sbjct: 232 DTVSALNLLRKMEEISHI-----------KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + N + S A Q L E+ E+ I ++ ++N +I AF + G
Sbjct: 281 DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER-KISPNVVTYNALINAFVKEGKF 339
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A + EM G+ P+ ITY ++I F K +R + ++ LM KGC P++ TF
Sbjct: 340 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 399
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I +R +L+ M R G+ + VTYN +I GFC G L+ A + M+ +
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
P+ T++ LC G A M K +M+K+
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFK-AMQKS 492
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ I+ DI+SF I+IK FC L A ++ KLG+ PDV+T+TTL+ D+R
Sbjct: 108 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRV 167
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ + C P++ TF + L + R +A L+ M G++PD++TY
Sbjct: 168 SEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTF 223
Query: 298 IKGFCRSGHLDMAKKVYSAMLG-RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+ G C+ G A + M + PN IY +I LC++G + ++ + + K
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 357 WVPSVDTISALLEGL 371
P++ T + ++ G
Sbjct: 284 IFPNIVTYNCMIGGF 298
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL-----------GVKPDVITYTTLISAFYK 233
DI + N ++ C+ G L A + MQK GV+PDV+TY LI
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + L+ M +G P+ T++ I L + R +A ++ M P+ VT
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
+N +I G+C++G +D +++ M R ++ + IY T+I+ + G+ N A + ++ +
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
P TI +L G + +A ++ +Q V +
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGY 681
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 122/287 (42%), Gaps = 22/287 (7%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM----MLYG--KAGMIKHA 134
+ F + GA+R D LL +P R G + + +++G G + A
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHE---MP---RRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFL--------MEVPEKFH-IQF 184
+D M G + + N L L ++ LK A++ F ++ F+ ++
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++NI+I G +A + EM G+ PD ITY+++I K +R + ++
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K PN+ TFN I R +L M R GI D + Y +I GF +
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
G+++ A ++ M+ + P+ + M+ + + A M +D
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y ++G ++ A++ F + + + L+ L + + K + F E+ E +
Sbjct: 76 YLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA- 134
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ FNI++ FC+ G + A V + K G++P V+++ TL++ + + + G L
Sbjct: 135 SLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLK 194
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M G P++ T++V I L + + +AN L M G+ P+ VT+ +I G C++
Sbjct: 195 NAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A + Y ML + +P+ Y T+I+ LC++GD A + + K P T
Sbjct: 255 GKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITY 314
Query: 365 SALLEG 370
+ L++G
Sbjct: 315 TTLIDG 320
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 3/275 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I A F + +G + +V S N + DL Q F L
Sbjct: 138 FFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLD--QGFKLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +++A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ + + M+ + P+L T+N I L K QA L+ M+ G++PD++TY
Sbjct: 256 KVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A ++ M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P T + ++ K A ++ +QR+
Sbjct: 376 GLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQ 410
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+T+ M + + N + L + DLK Q L E+ K ++ D
Sbjct: 253 KNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ + M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P+ T+ + I K A KL+ MQR G P VT
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGC-KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
Y KAGM++ + TF ++ C V + N L L+ + A E+ + I
Sbjct: 188 YVKAGMVEKGLATF-RRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMG-RLGIH 245
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ ++FNI+ C+ G DK + +M++ G +PD++TY TL++++ K R E L
Sbjct: 246 RNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYL 305
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ +M +G PNL T V + L + + +A++L M GI+PD V+YN ++ G+CR
Sbjct: 306 YKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCR 365
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + M + + M+G + P+ + ++ ++G
Sbjct: 366 EGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDG 402
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I + +M G R + N VL + D + FL ++ E+ + D+ ++N
Sbjct: 229 IGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEE-GFEPDLVTYN 287
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ ++C+ L+ A+ + M GV P++IT+T L++ ++ + + + L++ MV +
Sbjct: 288 TLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHR 347
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ ++N + + + L+ M GI PD VT L+++GF R G L A
Sbjct: 348 GIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSA 407
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ R+ +Y +I LC EG A + ++P ++T + L+E
Sbjct: 408 LNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVES 467
Query: 371 LKKNNQ 376
L K N
Sbjct: 468 LCKFNN 473
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + N ++ + + + V EM +LG+ + T+ + KD +
Sbjct: 212 NVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFL 271
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G P+L T+N + KRR A L +M G+ P+ +T+ +++ G C
Sbjct: 272 DKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEE 331
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A +++ M+ R + P+ Y T++ C+EG + + + + P T
Sbjct: 332 GKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTC 391
Query: 365 SALLEGLKKNNQPCKA-NTIMALVQRRV 391
++EG ++ + A NT++ L + R+
Sbjct: 392 RLIVEGFARDGKLLSALNTVVELKRFRI 419
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 95/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + +++ CE G + +A+ + +M G+ PDV++Y TL+S + ++ + ++ L
Sbjct: 317 NLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLL 376
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ T + ++ + A + ++RF I+ E Y+ +I C
Sbjct: 377 HEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIE 436
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A+ + MP Y ++ LC+ + A I+ + +K++ + ++
Sbjct: 437 GRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAY 496
Query: 365 SALLEGLKKNNQPCKANTIM 384
A++ L + N+ +A ++
Sbjct: 497 RAVISCLCRVNRTLEAEGLL 516
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 8/228 (3%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C+ V+ K+L+ + ++ F +++PE D++ + IV A C G A
Sbjct: 391 CRLIVEGFARDGKLLSALNTVVELKRFRIKIPE------DLYDYLIV--ALCIEGRPFAA 442
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
++ + + G P + TY L+ + K N E L + MV + NL + I
Sbjct: 443 RSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISC 502
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L R+ +A L+ M GI PD +I G+C +D A + + +
Sbjct: 503 LCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYD 562
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ Y ++ C G+ + +K +V + T ++ GL+K
Sbjct: 563 TESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGLQK 610
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L ++ EK I+ D+ +N +I C+ +D
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G++PDV TY++LIS R + L + M+ + PN+ TF+ I
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ + P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 325 NRKIYQTMIHYLC-----QEG------------------------------DFNLAYIMC 349
N Y T+I C +EG D + A ++
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
K + P++ T + LL+GL KN + KA + +QR
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + DI + + ++ +C + A ++ +M ++G KPD T+TTLI + N+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV +GC P+L T+ + L + A L+ M++ IE D V YN +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A +++ M + + P+ Y ++I LC G ++ A + D +++
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P+V T SAL++ K + +A +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ E+ I ++ +F+
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 332
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T++ I+ +R + +L M + G+ + VTY +I GF ++ D A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ + PN Y ++ LC+ G A ++ + + P + T + ++EG
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 513 M------CKAGKV 519
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++ +IK FC+ +++ + EM + G+ + +TYTTLI F++ + ++
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N+ + L + +A + +QR +EPD TYN++I+G C++
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ +++ + + + PN Y TMI C++G A + K + +P+ T
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 577 NTLIRARLRDGDREASAELI 596
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I DIF+++ +I FC LD+A + M P+V+TY+TLI F K R E
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G N T+ I R A + M G+ P+ +TYN+++
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L A V+ + + P+ Y MI +C+ G + + C S+ K
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KGV 534
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
P+V + ++ G + +A++++ ++ P
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA ++ M+ F +M G + + ++RD Q ++ +
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHP 466
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++NI++ C+ G L KA +V +Q+ ++PD+ TY +I K + E G L+
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG PN+ +N I K +A+ L+ M+ G P+ TYN +I+ R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 305 GHLDMAKKVYSAM 317
G + + ++ M
Sbjct: 587 GDREASAELIKEM 599
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNI 191
+A F M G + + N L L ++ L KA+ F E ++ ++ DI+++NI
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYNI 508
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+ C+ G ++ + + + GV P+VI Y T+IS F + E + L M G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN T+N I+ + + +L+ M+ G D T LV G LD
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 624
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 38/346 (10%)
Query: 62 KLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K Q F + H+R + + +F+ + A + L+ +SL G
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+ Y AG A+ F +MH +GC + + S N L VL +S+ ++ + +F
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR---- 236
+ D ++N+++ +C + KA V+ EM + G+ P++ TY T++ F++ +
Sbjct: 192 SV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 237 -----------------------------PEI--GNGLWNLMVCKGCFPNLATFNVRIQH 265
EI +++ M+ +G P++AT+N IQ
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K A + M R G EP+ TYN++I+G +G +++ M PN
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ Y MI Y + + A + + + +P++DT + L+ G+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G AG IK A + F +M G +V + NA ++VL + +++ E+ + + +
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY-EP 333
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N++I+ G + +M M+ G +P+ TY +I + + + E GL+
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 393
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQ---ANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M C PNL T+N+ I + ++RS A KL+ M G P + T+N V+ G
Sbjct: 394 EKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGL 453
Query: 302 CRSGHLDMAKKV 313
+G+ AK++
Sbjct: 454 LLTGNQAFAKEI 465
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 38/233 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F IV + + G DKA + + M + G D+ ++ T++ K R E L+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 248 VCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+G F + T+NV + +R+ +A +++ M GI P+ TYN ++KGF R+G
Sbjct: 188 --RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 307 --------LDM---------------------------AKKVYSAMLGRRLMPNRKIYQT 331
L+M A+ V+ M+ ++P+ Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
MI LC++ + A +M ++ +++ + P+V T + L+ GL + + +M
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 105/188 (55%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I A C+ ++ +AY + EM G+ DV+TYTTLI F ++ + GL N MV
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV 261
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
K PN+ T+N+ + L + + +A ++ +M + ++PD +TY+ ++ G+ L
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELK 321
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ V++AM + P+ Y +I+ C+ + A + K+ +KN VP + T S+L+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 369 EGLKKNNQ 376
+GL K+ +
Sbjct: 382 DGLCKSGR 389
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A F +M G V + + + LK L E+ K I ++
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK-TINPNV 269
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI++ A C+ G + +A V+ M K VKPDVITY+TL+ ++ + ++N
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P++ ++ + I + +A L M + + P VTY+ +I G C+SG
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + M R + N Y ++I LC+ G + A + + P T +
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449
Query: 367 LLEGLKKNNQ 376
LL+GL K +
Sbjct: 450 LLDGLCKGGR 459
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ I+I FC+ ++D+A + EM + + P ++TY++LI K R L
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G N+ T+N I L +A L M+ GI P T+ +++ G C+
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++ + +L + + Y MI+ C++G A M + VP+ T
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517
Query: 365 SALLEGLKKNNQPCKANTIM 384
++ L K ++ KA ++
Sbjct: 518 DIIINALFKKDENDKAEKLL 537
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA----------- 230
IQ D+ + NI+I FC MG + + V+ ++ K G +P IT+TTLI
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKAL 149
Query: 231 ------------FYKDNRPEIGNGLWNLMVCKGCF------------PNLATFNVRIQHL 266
F + + + NG+ + +G PN+ +N I L
Sbjct: 150 HFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDAL 209
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A L M GI D VTY +I GFC + L A + + M+ + + PN
Sbjct: 210 CKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNV 269
Query: 327 KIYQTMIHYLCQEGDF----NLAYIMCKDSMKKNWVPSVDTISALLEG------LKKNNQ 376
Y ++ LC+EG N+ +M K +K P V T S L++G LKK
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVK----PDVITYSTLMDGYFLVYELKKAQH 325
Query: 377 PCKANTIMALV 387
A ++M +
Sbjct: 326 VFNAMSLMGVT 336
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
Query: 111 QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
+G + ++YG A +K A+ +M L V + N + L + +K
Sbjct: 228 KGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
+ L V K ++ D+ +++ ++ + + L KA V M +GV PDV +YT LI
Sbjct: 288 AKNVL-AVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILI 346
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F K+ + L+ M K P + T++ I L R L+ M+ GI
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIP 406
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
+ +TYN +I G C++GHLD A +++ M + + P + ++ LC+ G A
Sbjct: 407 ANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEA 466
Query: 349 CKDSMKKNWVPSVDTISALLEG 370
+D + K + V + ++ G
Sbjct: 467 FQDLLTKGYHLDVYKYNVMING 488
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I FN ++ +F ++ A + ++ G++PD+IT LI+ F + G +
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFC 302
++ +G P+ TF I+ L K Q NK + + GI+ D+V+Y +I G C
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLK---GQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 175
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G A K+ + GR PN ++Y T+I LC+ + AY + + K V
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235
Query: 363 TISALLEGL 371
T + L+ G
Sbjct: 236 TYTTLIYGF 244
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K M+ A++ F +MH + + ++ + L +S + + + E+ ++ I
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR-GIPA 407
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I C+ G LD+A + +M+ G++P T+T L+ K R + +
Sbjct: 408 NVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAF 467
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG ++ +NV I + +A ++ M+ G P+ VT++++I +
Sbjct: 468 QDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKK 527
Query: 305 GHLDMAKKVYSAMLGRRLM 323
D A+K+ M+ R L+
Sbjct: 528 DENDKAEKLLRQMICRGLL 546
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 1/206 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A F M L G V S + +++ + E+ +K + I +++
Sbjct: 320 LKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYS 378
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C+ G + + ++ EM+ G+ +VITY +LI K+ + L+N M +
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P TF + + L R A + + G D YN++I G C+ G L+ A
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ S M +PN + +I+ L
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINAL 524
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +I + ++ +F K L + + KG P+L T N+ I + + +
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ + + G +P +T+ +IKG C G ++ A + +L + + ++ Y T+I+ +C+
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
GD A + + + P+V+ + +++ L K
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCK 211
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M+C P + FN + + A L ++ GI+PD +T N++I FC
Sbjct: 47 FNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G + V + +L R P+ + T+I LC +G N A
Sbjct: 107 MGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 122/231 (52%), Gaps = 6/231 (2%)
Query: 119 MRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV-LTESRDLKAIQAFLME 175
M ++M+ YGKAG+++ ++ F M G +RT+KS +A KV L R + A + F
Sbjct: 82 MWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKM 141
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ E I+ +FN++I F G ++ A +M+ + PDVITY T+I+ +Y+
Sbjct: 142 LSEG--IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVK 199
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ E + M K PN+ T+ I+ V+ + A +L+ M+ +GI+P+ +TY+
Sbjct: 200 KMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYS 259
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMP-NRKIYQTMIHYLCQEGDFNLA 345
++ G C + + A+ + ML + + P + I+ +I C+ G+ + A
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAA 310
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 9/255 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + A+ +M YG K + + L L + + ++ L E+ +K+
Sbjct: 230 YVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPT 289
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F +I + C+ G LD A V+ M +L V + Y LI + K + + L
Sbjct: 290 DNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLL 349
Query: 245 NLMVCKGCF--PNL------ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ ++ K P + +N I++L N + +A L+ + + G++ D N
Sbjct: 350 DKLIEKDIILRPQSTLHMEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQ-DPTALNT 408
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I+G R G D A ++ ML R++ + Y +++ ++ + A ++ +
Sbjct: 409 LIRGHSREGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSMIEND 468
Query: 357 WVPSVDTISALLEGL 371
+P +++E L
Sbjct: 469 HLPDSSLFRSVMESL 483
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y ++G ++ A++ + + + L+ L + + K + F E+ E +
Sbjct: 82 YLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGY-PX 140
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ FNI++ FC+ G + A V + K G++P V++Y TL++ + + + G L
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++
Sbjct: 201 SAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKN 260
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D+A ++Y ML + L+P+ Y +I+ LC++GD A + + K P T
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITY 320
Query: 365 SALLEGLKKNN 375
+ L++G K
Sbjct: 321 TTLIDGCCKEG 331
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 202 AMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QAN L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G+LB A + M+ + + Y +I LCQEG A M + +
Sbjct: 322 TLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LB A+ M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRX 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 128/260 (49%), Gaps = 6/260 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ + G + AM M GC + + N L E + +A++ L+E E+ ++
Sbjct: 234 FCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVR--LVETMERSGVE 291
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D++S+N ++K FC+ ++D+A+L+MVE + DV++Y T+I+AF K R G L
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYEL 351
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG P++ TFN+ I + + + KL+ M + + PD + Y V+ C+
Sbjct: 352 FEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCK 411
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G +D+A V+ M+ + P+ Y +++ C+ A + + K P T
Sbjct: 412 NGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVT 471
Query: 364 ISALLEGL---KKNNQPCKA 380
++ GL KK + C+
Sbjct: 472 YKLIVGGLIRGKKISLACRV 491
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V S N + ++R + E+ K I+ D+ +FNI+I AF G ++
Sbjct: 329 VVSYNTVITAFCKARRTRKGYELFEEMCGK-GIRPDMVTFNILIDAFLREGSTHVVKKLL 387
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
EM K+ V PD I YT ++ K+ + ++ + ++ MV G P++ ++N +
Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R A L MQ G+ PDEVTY L++ G R + +A +V+ M+ R NR +
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLS 507
Query: 330 QTMIH 334
+T+++
Sbjct: 508 ETLVN 512
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI++FN + C L+ A + M G PDV++YT +I A R + +W
Sbjct: 118 DIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW 177
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG P+ + L + R A +L+ + + G++ + + YN +I GFCR
Sbjct: 178 RRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRM 237
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K+ + M +P+ Y +++Y C+EG + A + + + P + +
Sbjct: 238 GRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSY 297
Query: 365 SALLEGLKKNNQPCKANTIMA 385
+ LL+G K N +A+ +M
Sbjct: 298 NELLKGFCKANMVDRAHLMMV 318
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ C G +D AY ++V + K GVK + + Y LI F + R + + M G
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P+L T+N+ + + + +A +L+ M+R G+EPD +YN ++KGFC++ +D A
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + + M + Y T+I C+ Y + ++ K P + T + L++
Sbjct: 315 LMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAF 374
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 7/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME--VPEKFHIQF 184
KAG+I A+ F M C+ N + VL L + +P F +
Sbjct: 22 KAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLL- 80
Query: 185 DIFSFNIVIKAFCEMGI---LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
F+++ I A C L + ++++M LG PD+ + T ++ + NR E
Sbjct: 81 -PFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETAL 139
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M KG P++ ++ + I L N +R +A K+ + G+ PD ++ G
Sbjct: 140 ELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGL 199
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G +D+A ++ ++ + N +Y +I C+ G + A + + VP +
Sbjct: 200 CSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDL 259
Query: 362 DTISALL 368
T + LL
Sbjct: 260 VTYNILL 266
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 93/234 (39%), Gaps = 1/234 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM G + + N L +L L+ +P K D+ S+ I+I A C
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGR-DPDVVSYTIIIDALCNA 167
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
D+A V + G+ PD L+ R ++ L ++ G N +
Sbjct: 168 KRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVY 227
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I R +A K+ M R G PD VTYN+++ C G +D A ++ M
Sbjct: 228 NALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMER 287
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ P+ Y ++ C+ + A++M + M+ + V + + ++ K
Sbjct: 288 SGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCK 341
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L +
Sbjct: 142 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN--EXFRLKK 199
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D + EM G+ P+ +T+TTLI K+
Sbjct: 200 AMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNG 259
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 260 RVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 319
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 320 TLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 379
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + +M +QR
Sbjct: 380 GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQR 413
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 257 KNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 315
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 316 ITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 375
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P + T+ + I K W +KLM MQR G P VTYN+++ G
Sbjct: 376 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFY 232
DI+ F+ +I A+ E G L A + + K V D + Y L+ FY
Sbjct: 69 DIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 128
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+++ + C G +L FN+ + + A + + ++G+ P V
Sbjct: 129 EES-----------LEC-GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV 176
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
++N ++ G+ + G L+ ++ AM + P+ Y +I+ LC+E + + +
Sbjct: 177 SFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEM 236
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ VP+ T + L++G KN +
Sbjct: 237 LDXGLVPNGVTFTTLIDGHCKNGR 260
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 1/252 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G + A M G V + A L + D++A L E+ K ++
Sbjct: 441 YCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK-GLEL 499
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I C+ G L++A M +M +KPDV TYTTLI A K + + L
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P + T+NV + R KL+ M I P+ TYN ++K +C
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ ++Y M R + PN Y +I C+ + A + ++K + + +
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679
Query: 365 SALLEGLKKNNQ 376
SAL+ L K +
Sbjct: 680 SALIRLLNKKKK 691
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
DL + + + E+ K + D ++ +I C L++A ++ EM + D +TY
Sbjct: 376 DLVSARRWFDEMQRK-GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T LI + K + + N MV +G PN+ T+ L + AN+L+ M
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+E + TYN +I G C++G+L+ A + + M L P+ Y T+I LC+ GD +
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGL 371
A+ + ++ + K P++ T + L+ G
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGF 581
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ V S N LK L ++ +K + E+ D+ ++ I+I C +G L+ A
Sbjct: 257 KNVCSYNILLKALCDAGRVKDARQLFDEMASAP----DVVTYGILIHGHCALGELENAVK 312
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQH 265
++ EM GV+P+ YT++++ ++ I + L + MV + + A + +
Sbjct: 313 LLDEMVAGGVEPNATVYTSVVALLC--DKGWISDALRVVEDMVQRKVILDEALYTTVLSG 370
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
NK A + MQR G+ D VTY +I G CR+ L+ A+K+ M RRL +
Sbjct: 371 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVD 430
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
Y +I C+ G A+ M +++ P+V T +AL +GL K AN ++
Sbjct: 431 EVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 1/255 (0%)
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
E ++ + G + A F +M G + + L + +L+ + L
Sbjct: 361 EALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQ 420
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ + + D ++ ++I +C+ G + +A+ + M + GV P+V+TYT L K
Sbjct: 421 EMWAR-RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ N L + M KG N T+N I L QA + M M ++PD TY
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+I C+SG LD A + ML + + P Y +++ C G + ++
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599
Query: 355 KNWVPSVDTISALLE 369
KN P+ T ++L++
Sbjct: 600 KNIHPNAATYNSLMK 614
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + ++M G + + N+ + L ++ L+ + ++ + ++ D+
Sbjct: 478 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM-DTACLKPDV 536
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I A C+ G LD+A+ ++ EM G+KP ++TY L++ F R E G L +
Sbjct: 537 YTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDW 596
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ K PN AT+N ++ + ++ M+ + P+E TYN++IKG C++ +
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARN 656
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ A + M+ + Y +I L ++ F A + D K+ D
Sbjct: 657 MKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESD 712
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ AM T DM K V + + L +S DL + L E+ +K I+ I
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK-GIKPTI 571
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ FC G ++ ++ M + + P+ TY +L+ + +N + ++
Sbjct: 572 VTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKG 631
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + PN T+N+ I+ R +A M + G +Y+ +I+ +
Sbjct: 632 MRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKK 691
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A++++ M L +Y I E + +C + ++ + V S
Sbjct: 692 FVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIVKS 745
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YGKAG+++ ++ F M G +R+VKS NA KV+ + F ++ ++ I
Sbjct: 194 YGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDE-GIGP 252
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++N++I F L A +M+ G+ PDV+TY T+I+ +Y+ R E L+
Sbjct: 253 TRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLF 312
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K P + ++ I+ R +L+ M+ GI+P+ VTY ++ C +
Sbjct: 313 AEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDA 372
Query: 305 GHLDMAKKVYSAMLGRRLMP-NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
G + AK + M+ RR+ P + I+ +++ C+ GD A + D M K +PS
Sbjct: 373 GKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAA-VDVLDGMIKLSIPS 428
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 163/403 (40%), Gaps = 45/403 (11%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKA----- 56
+SL P FC + A D I+ N S P +P D E P + + K
Sbjct: 20 ISLTPYLHFCTSIPAPGEDPISPNPETTAS----PGPKP--DPKTETPNVAQEKQYQRIP 73
Query: 57 -----ERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARR--FDYIEHLLEHQKSL 109
R PEKL + NR D +RL + R +H L + L
Sbjct: 74 RAKQQHRSPEKLEDIICRMMANR----------DWTTRLQNSIRALVPEFDHSLVYN-VL 122
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
R+ ++ +AG+I+H +T + +++L L
Sbjct: 123 HGARKPDHALQFFRWVERAGLIQHDRETHMKI---------------IQILGRYSMLNHA 167
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+ ++E K + D F ++I ++ + GI+ ++ + +M++LGV+ V +Y L
Sbjct: 168 RCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFK 227
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ R + +N M+ +G P T+NV I R A + M+ GI P
Sbjct: 228 VIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISP 287
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D VTYN +I G+ R ++ A+K+++ M + + P Y TMI N +
Sbjct: 288 DVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLL 347
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
++ P+ T + LL L + +A I+ +V+RR+
Sbjct: 348 EEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRI 390
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 81/190 (42%), Gaps = 36/190 (18%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ + ++N VI+ C G KA ++ ++ K GV+ D + + LI K+ P+
Sbjct: 469 LEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVE-DPLAFNNLICGHAKEGTPD--- 524
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
A +++ +M R GI D Y L+I+ +
Sbjct: 525 --------------------------------SAFEILKIMGRKGIPRDADAYRLLIESY 552
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
R G AK +M+ +P+ ++++++ L ++G A + K ++K ++
Sbjct: 553 LRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENM 612
Query: 362 DTISALLEGL 371
D ++ +LE L
Sbjct: 613 DLVAKILEAL 622
>gi|125553201|gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
RLA AR F + LL S R ++ G A A+ F + + C
Sbjct: 69 RLARARLFPLVPPLLAALHSRGAPLRPTVFAAVIDHLGAASCPDAAVGVFRTVPAF-CSH 127
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ + ++ L L + A + L P K ++ + S+NI++K C A V
Sbjct: 128 SAATFHSLLNALVSNGRTDAARDMLPLAP-KLGVRLNAVSYNIILKGVCLRDGFMGARGV 186
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ EM GV+P V+T+ TL+ + ++ L + M +G PN AT+ + ++ L +
Sbjct: 187 LDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCD 246
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R A KLM M+ G + D V Y +++ R G D +++ SAM R+L P+
Sbjct: 247 ADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAMRKRKLKPDDAS 306
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y +I LC G + A+ + + VP T L++G
Sbjct: 307 YNILIRCLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDG 348
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + TV + N + +L A + + E+ + + + ++ ++++ C+
Sbjct: 194 GVRPTVVTFNTLVGSACREGELGAAERLIDEMARR-GVAPNAATYALLMRGLCDADRHAD 252
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A +M +M+ G + DV+ Y L+S+ + + L + M + P+ A++N+ I+
Sbjct: 253 AEKLMFDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAMRKRKLKPDDASYNILIR 312
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + R+ +A++ + MQ G P TY +++ G CR+ D+ +V++AM+ P
Sbjct: 313 CLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCP 372
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ ++ + L ++G A+ + + ++ D A++ ++ +
Sbjct: 373 QARTFRHLARGLGEDGKAEEAFFVLEQMARREMSLDADGWQAVVTCVRSS 422
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
++P V + +I + P+ G++ V C + ATF+ + LV+ R+ A
Sbjct: 93 LRPTV--FAAVIDHLGAASCPDAAVGVFR-TVPAFCSHSAATFHSLLNALVSNGRTDAAR 149
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
++ L + G+ + V+YN+++KG C A+ V ML R + P + T++
Sbjct: 150 DMLPLAPKLGVRLNAVSYNIILKGVCLRDGFMGARGVLDEMLSRGVRPTVVTFNTLVGSA 209
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
C+EG+ A + + ++ P+ T + L+ GL ++ A +M
Sbjct: 210 CREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLM 257
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+DM GC+ V + + D ++ L + K ++ D S+NI+I+ C+
Sbjct: 258 FDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAM-RKRKLKPDDASYNILIRCLCD 316
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G D+A+ ++EMQ G P TY L+ + ++G ++N M+ G P T
Sbjct: 317 AGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQART 376
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
F + L ++ +A ++ M R + D + V+
Sbjct: 377 FRHLARGLGEDGKAEEAFFVLEQMARREMSLDADGWQAVV 416
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R + ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 6/205 (2%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K G++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ +A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
L++G CK + ++ R
Sbjct: 316 TLIDG------SCKEGDLETALEYR 334
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|224140601|ref|XP_002323670.1| predicted protein [Populus trichocarpa]
gi|222868300|gb|EEF05431.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 147/296 (49%), Gaps = 14/296 (4%)
Query: 104 EHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E ++ L Q ++GF + L + K G +++ F M GCK +++ N L
Sbjct: 194 EAKRVLDQMMQKGFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLL 253
Query: 158 KVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
K + + +AF LME +K ++ DI+++ ++ FC++G D+A ++ E ++G
Sbjct: 254 KGMCYVGRID--EAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMG 311
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+ P+V+T+ TL+ + K+ RP G G+ LM + C P+ +++ + L+ +
Sbjct: 312 LAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGL 371
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSG-----HLDMAKKVYSAMLGRRLMPNRKIYQT 331
++ M+ G+E DE N +++G CR +++A +V+ M R + + Y
Sbjct: 372 RIFNEMEGSGLEADERLMNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYAL 431
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+I L + A+I ++ ++P + TI+ +++ L + KA ++ L+
Sbjct: 432 VIQALWVAKKVDDAFINLHQMVRLGYIPRLITINNVIQALCVGGKVDKAFYVLVLM 487
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F+I FN V+ A D + + ++P+ T++ ++ K P +
Sbjct: 139 FNISDFNDVLMALVTANESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRV 198
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M+ KG PN+AT + I + ++ +M R G +P+ TYN ++KG C
Sbjct: 199 LDQMMQKGFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCY 258
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +D A ++ + + P+ Y M+ C+ G + A + ++M+ P+V T
Sbjct: 259 VGRIDEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVT 318
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+ LL+G K +P K ++ L+++R
Sbjct: 319 FNTLLDGYAKEGRPLKGFGVLKLMKQR 345
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 101/192 (52%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ ++ + ++F+I+++ C+ +A V+ +M + G P+V T T LI++F K + +
Sbjct: 170 YSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLTILINSFCKMGQLQN 229
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
++ +M GC PN+ T+N ++ + R +A +LM +++ +EPD TY ++
Sbjct: 230 TFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFELMEDIKKTTVEPDIYTYTAMMD 289
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC+ G D A ++ + + L PN + T++ +EG + + K ++ +P
Sbjct: 290 GFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMP 349
Query: 360 SVDTISALLEGL 371
+ S LL GL
Sbjct: 350 DYISYSTLLHGL 361
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC-----EMGILDKAYLVMVEM 212
KVL R ++ +E E+ N +++ C E +++ AY V +M
Sbjct: 366 KVLAGLRIFNEMEGSGLEADERL--------MNSLVRGLCRKSIKENDLVEVAYEVFEKM 417
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKR 270
+K G + TY +I A + + + + NL MV G P L T N IQ L
Sbjct: 418 KKRGFVIEQSTYALVIQALWVAKK--VDDAFINLHQMVRLGYIPRLITINNVIQALCVGG 475
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ +A ++ LM P ++Y+L+I R A VY A L R ++P++K
Sbjct: 476 KVDKAFYVLVLMYENSKIPSRMSYDLLIHELNRQERTLGACNVYGAALVRGVVPHKK 532
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 8/304 (2%)
Query: 85 DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF-------IMRIMMLYGKAGMIKHAMDT 137
DT + +A R + +E E K + + R + I+ + G A MI A+
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
FY + + C+ T ++ N+ + +L + + E+ + H D +++ +I AFC
Sbjct: 178 FYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFC 237
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
++G D A ++ EM+ G++P YT LI+ F+K N GL+ M + C P++
Sbjct: 238 KLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVF 297
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ I+ L R +A M+R G PD V N +I ++G LD A K++ M
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEM 357
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQ 376
+ +P+ Y T+I L + + MK + + PS T S L++G K N+
Sbjct: 358 GTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNR 417
Query: 377 PCKA 380
KA
Sbjct: 418 TEKA 421
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 47/334 (14%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG------FIMRIMMLYGKAGMIKHA 134
+ + + + L A RFD E + RREG I ++ GKAG + A
Sbjct: 297 FTYTELIRGLGKAGRFD------EAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA 350
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ F +M C +V + N +K L ES+ + + E + I F+++I+I
Sbjct: 351 VKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN------------- 241
FC+ +KA +++ EM + G P Y +LI A K R +I +
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSS 470
Query: 242 ----------------------GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
L++ M GC PN+ +N + L +A M
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTM 530
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
MQ G PD +YN+++ G ++G A ++ S M + P+ Y T++ +
Sbjct: 531 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHA 590
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
G F A + K+ + + T S++LE + K
Sbjct: 591 GLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 38/250 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++ +I+ + G D+AY EM++ G +PD + +I+ K R + L+
Sbjct: 295 DVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLF 354
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C P++ T+N I+ L +K R + + M+ GI P TY+++I GFC+
Sbjct: 355 EEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCK 414
Query: 304 SGHLDMAKKVYSAMLGRRLMP-----------------------------------NRKI 328
+ + A + M + P + ++
Sbjct: 415 TNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARV 474
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI +L + G + A + + K P+V +AL+ GL + +A T M +Q
Sbjct: 475 YAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 389 RR--VPHFSS 396
+P +S
Sbjct: 535 EHGCIPDINS 544
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 38/226 (16%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFYD 140
A+ + L A+R+D I H L + G + +M+ + GKAG + A++ F +
Sbjct: 439 AYCSLIDALGKAKRYD-IAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDE 497
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M+ GC P +++++N ++ G
Sbjct: 498 MNKLGC-----------------------------TP-------NVYAYNALMSGLARAG 521
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+LD+A M MQ+ G PD+ +Y +++ K P + + M P+ ++N
Sbjct: 522 MLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYN 581
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ + + +A KLM M G E D +TY+ +++ + H
Sbjct: 582 TVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 5/184 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
AL K K +LFQ K N + + + + L A R D +L + L
Sbjct: 446 ALGKAKRYDIAHELFQELKENCGS----SSARVYAVMIKHLGKAGRLDDAVNLFDEMNKL 501
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
+M +AGM+ A+ T M +GC + S N L L ++
Sbjct: 502 GCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 561
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
L + + I+ D S+N V+ A G+ ++A +M EM LG + D+ITY++++
Sbjct: 562 MEMLSNMKQS-AIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILE 620
Query: 230 AFYK 233
A K
Sbjct: 621 AIGK 624
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V E+ K G++P V+++ TL++ + + + G L +
Sbjct: 136 LYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKS 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L G M G+ P+ VT+ +I G C++G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A + Y ML + P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 SIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G ++ A F ++ +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ ++ A + EM G+ P+ +T+TTLI K
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
++ + M+ +G P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 SIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A M+ + + Y +I LC+EG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 376 GLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQR 409
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I AM+T+ +M G + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A M K ++ D + YT LIS ++ + +
Sbjct: 312 ITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P+ T+ + I K +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 114 REGFIMRIMMLYGKAGMIKHAM-------DTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
RE +M+++ KAG ++ + Y + C + +K + SR
Sbjct: 67 RETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-- 124
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ME+ E H + D+F++N VI FC++ ++ A V+ M+ G PD++TY
Sbjct: 125 ------VMEILES-HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNI 177
Query: 227 LISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+I + NR ++G L L ++ C P + T+ + I+ + + +A KL+ M
Sbjct: 178 MIGSLC--NRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 235
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G+ PD TYN +I+G C+ G D +K+ + M R PN+ Y +I LC+ G +
Sbjct: 236 RGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDE 295
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K ++K P + L+ L K +
Sbjct: 296 AISVLKVMIEKELTPDTYSYDPLISALCKEGR 327
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ I+I+A G +++A ++ EM G+ PD+ TY +I K+ + G L
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVA 266
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +GC PN T+++ I L R +A ++ +M + PD +Y+ +I C+ G
Sbjct: 267 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 326
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
LD+A + M+ +P+ Y T++ LC+ G+ N A
Sbjct: 327 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 366
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N +I+ C+ G+ D+ ++ EM G +P+ +TY+ LIS+ + R + +
Sbjct: 241 DMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL 300
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M+ K P+ +++ I L + R A +M M G PD V YN ++ C++
Sbjct: 301 KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 360
Query: 305 GHLDMAKKVYSAMLGRRLMPN---RKIYQTMIHYL 336
G+ + A ++++ + G PN RK++ I +
Sbjct: 361 GNANQALEIFNKLRGMGCPPNDGERKLWSWQIPFF 395
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I+ A + F +M YGCK N L + + + + ++ ++ I DI
Sbjct: 872 KAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDI 930
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ I+I C+ G L+ ++ ++G++PD+ITY LI K R E L+N
Sbjct: 931 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 990
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PNL T+N I HL ++ +A K+ + G +P+ TYN +I+G+ SG
Sbjct: 991 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1050
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTM 332
D A Y M+ +PN Y +
Sbjct: 1051 TDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 10/327 (3%)
Query: 51 LVKLKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL---EHQ 106
+V RD E + L + AH V N Y++ + L A+RFD +L E++
Sbjct: 202 MVAFGKRRDVETVLWLLREMEAHG--VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE 259
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
P +++++ AG I A D F+ M K + L ++ D
Sbjct: 260 GCKPDVITHTVLIQVLC---DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+++ + + ++ ++ VI A C++G + +A + EM++ G+ P+ +Y +
Sbjct: 317 QSVMEIWNAMKADGY-NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 375
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LIS F K +R L+ M G PN T + I + S +A + LM+ G
Sbjct: 376 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 435
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I PD V N V+ G +SG L MAK+V+ + + P+ Y MI + F+ A
Sbjct: 436 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 495
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKK 373
+ D ++ N VP V +++L++ L K
Sbjct: 496 KIFYDMIENNCVPDVLAVNSLIDTLYK 522
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 14/277 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL------TESRDLKAIQAFLMEVPEKF 180
KA A++ F M ++G K N VL +KAIQ + E+ +
Sbjct: 382 KADRFGDALELFKHMDIHGPKP-----NGYTHVLFINYYGKSGESIKAIQRY--ELMKSK 434
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+ + N V+ + G L A V E++ +GV PD ITYT +I K ++ +
Sbjct: 435 GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA 494
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ M+ C P++ N I L R +A ++ ++ +EP + TYN ++ G
Sbjct: 495 VKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAG 554
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
R G + + M PN Y T++ LC+ G N A M K +P
Sbjct: 555 LGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 614
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR-RVPHFSS 396
+ + + ++ GL K + +A +I +++ +P +++
Sbjct: 615 LSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYAT 651
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 9/292 (3%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+ + L D E L K L G E ++ GK+ I+ + +MH
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817
Query: 143 LYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
G + T + N + L +SR L +AI + + + F ++ ++ + G
Sbjct: 818 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPT--PCTYGPLLDGLLKAGR 875
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
++ A + EM + G K + Y L++ E L+ MV +G P++ ++ +
Sbjct: 876 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 935
Query: 262 RIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
I L ++ Q N + ++ G+EPD +TYNL+I G +S L+ A +++ M
Sbjct: 936 IIDTLC---KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ ++PN Y ++I +L + G A M ++ + K W P+V T +AL+ G
Sbjct: 993 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1044
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N+++ A + +++ V EM + G + +TY T+IS K R E L+
Sbjct: 789 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 848
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ +G P T+ + L+ R A L M +G + + YN+++ G +
Sbjct: 849 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 908
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+ + ++ M+ + + P+ K Y +I LC+ G N + ++ P + T
Sbjct: 909 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 968
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPH-FSSNQL 399
+ L++GL K+ + +A ++ +Q++ VP+ ++ N L
Sbjct: 969 NLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL 1006
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Query: 99 IEHLLEHQKSLP-QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
IE +L+ Q+ + +G ++ ++ G K+ ++ A+D +Y++ G T +
Sbjct: 806 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 865
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L ++ ++ + E+ E + + + +NI++ G +K + +M
Sbjct: 866 LLDGLLKAGRIEDAENLFNEMLE-YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 924
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ PD+ +YT +I K + G + ++ G P+L T+N+ I L +R +A
Sbjct: 925 GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 984
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L MQ+ GI P+ TYN +I ++G A K+Y +L + PN Y +I
Sbjct: 985 VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1044
Query: 336 LCQEGDFNLAY 346
G + AY
Sbjct: 1045 YSVSGSTDSAY 1055
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+++ +M +G+ G + D M K V + A L L++ L V
Sbjct: 95 YMLELMRGHGRVGDMAEVFDV---MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-PV 150
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ I + +++N ++ + G +A V M GV P V TY+ L+ AF K R
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK--R 208
Query: 237 PEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ LW L M G PN+ ++ + I+ L +R +A +++ M+ G +PD +T+
Sbjct: 209 RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 268
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAYIMCK 350
++I+ C +G + AK V+ M P+R Y T++ GD + M
Sbjct: 269 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKA 328
Query: 351 DSMKKNWVPSVDTISALLE 369
D N V I AL +
Sbjct: 329 DGYNDNVVAYTAVIDALCQ 347
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDI 186
+I A F +M GC + N L + +S ++ +++V E+ H +
Sbjct: 770 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE----MLKVQEEMHRKGYESTY 825
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + L++A + + G P TY L+ K R E L+N
Sbjct: 826 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRR-SWQANKLMGLMQRF---GIEPDEVTYNLVIKGFC 302
M+ GC N +N+ L+N R + K+ L Q GI PD +Y ++I C
Sbjct: 886 MLEYGCKANCTIYNI----LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 941
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++G L+ + +L L P+ Y +I L + A + + KK VP++
Sbjct: 942 KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1001
Query: 363 TISALLEGLKKNNQPCKAN 381
T ++L+ L K + +A
Sbjct: 1002 TYNSLILHLGKAGKAAEAG 1020
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++++++ AF + ++ ++ EM+ GVKP+V +YT I + R + + M
Sbjct: 197 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 256
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+GC P++ T V IQ L + R A + M++ +PD VTY ++ F +G
Sbjct: 257 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
++++AM N Y +I LCQ G A M + +K VP + ++L
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 368 LEGLKKNNQ 376
+ G K ++
Sbjct: 377 ISGFLKADR 385
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL--KVLTESRDLKAIQAFLMEVPEKFHIQF 184
K G++K A+ D L +T +S +L +L ++ K+I+ E+ I
Sbjct: 661 KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE--FAEIIASSGITL 718
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F +IK C+ +A+ ++ + + GV Y +LI +N +I GL+
Sbjct: 719 DDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 778
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P+ T+N+ + + R + K+ M R G E VTYN +I G +S
Sbjct: 779 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 838
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
L+ A +Y ++ + P Y ++ L + G
Sbjct: 839 RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 874
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
+++ + G A MI A+ FY + C+ T ++ N+ + +L + + E+ +
Sbjct: 164 QVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNE 223
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
H Q D +++ +I AFC++G D A ++ EM++ G++P YT +IS F+K +
Sbjct: 224 GHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHG 283
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L+ M C P++ T+ I+ L R +A MQR G +PD V N +I
Sbjct: 284 ALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMIN 343
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV- 358
++G LD K++ M +PN Y T+I L + + MK + +
Sbjct: 344 FLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGIS 403
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
PS T S L++G K N+ KA
Sbjct: 404 PSPFTYSILIDGFCKTNRIEKA 425
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 135/332 (40%), Gaps = 37/332 (11%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFY 139
+ + + + L A R D H H+ + + +M M+ + GKAG + + F
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFY-HEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M + C V + N +K L ES+ + E + I F+++I+I FC+
Sbjct: 360 EMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKT 419
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN------------------ 241
++KA +++ EM + G P Y +LI A K R ++
Sbjct: 420 NRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVY 479
Query: 242 -----------------GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
L++ M GC PN+ +N + L +A M MQ
Sbjct: 480 AVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQE 539
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G PD +YN+++ G ++G A ++ + M + P+ Y T++ L G F
Sbjct: 540 HGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEE 599
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K+ + + T S++LE + K +Q
Sbjct: 600 AAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++ +I+ + G +D+AY EMQ+ G KPD + +I+ K R + G L+
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLF 358
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C PN+ T+N I+ L +K R + M+ GI P TY+++I GFC+
Sbjct: 359 EEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCK 418
Query: 304 SGHLDMAKKVYSAMLGRRLMP-----------------------------------NRKI 328
+ ++ A + M + P + ++
Sbjct: 419 TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 478
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI +L + G + A + + K P+V +AL+ GL + C + + ++
Sbjct: 479 YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLAR---ACMLDEALTTMR 535
Query: 389 RRVPHFSSNQLSAFKSILS 407
+ H ++++ IL+
Sbjct: 536 KMQEHGCLPDINSYNIILN 554
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 5/172 (2%)
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+LFQ K N + + + + L A R D +L + L +
Sbjct: 462 ELFQELKENCGS----SSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNAL 517
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
M +A M+ A+ T M +GC + S N L L ++ L +
Sbjct: 518 MSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNS-T 576
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
I+ D S+N V+ A G+ ++A +M EM LG + D+ITY++++ A K
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ SF +I A C++G +D A L +M GV P++ +++L+ + E L+
Sbjct: 370 DVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELF 429
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ +G + FN + +L N+ R +A +L+ LM R G+ P+ ++YN ++ G C +
Sbjct: 430 FEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLT 489
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K+ M+ L PN Y ++ C+ + AY + ++ + K P V T
Sbjct: 490 GRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATY 549
Query: 365 SALLEGLKKNNQPCKANTI 383
+ +L GL + + +AN +
Sbjct: 550 NTILHGLFQTGRFSEANEL 568
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 3/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQ 183
Y K MI+ AM F M G V S A + L + R A+ F + E +
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG--VT 403
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+IF F+ ++ C +G +KA + E+ G+ D + + TL+ + R L
Sbjct: 404 PNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL 463
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+LM+ G PN+ ++N + R +A KL+ +M G++P+E TY ++++G+C+
Sbjct: 464 IDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCK 523
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ +D A ++ ML + + P Y T++H L Q G F+ A + + + + T
Sbjct: 524 ARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYT 583
Query: 364 ISALLEGLKKNN 375
+ +L GL KNN
Sbjct: 584 YNIILNGLCKNN 595
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G ++H F + G + V ++ LK L +++ + L+ +F
Sbjct: 100 FCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPP 159
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N VI F G ++KAY + +EM G+ P+V+TYTT+I K + G++
Sbjct: 160 DVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVF 219
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P+ T+N I ++ + + +++ M G+EPD +TY L++ C++
Sbjct: 220 QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKN 279
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G A+ + +M + + P+ IY ++H +G
Sbjct: 280 GRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKG 315
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 192 VIKAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++K C+ +D+A ++++ M + G PDV+ Y T+I+ F+++ + E L+ M+ +
Sbjct: 131 LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ 190
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN+ T+ I L + +A + M G++PD TYN +I G+ +G
Sbjct: 191 GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEV 250
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M L P+ Y ++ YLC+ G A + +K P V + LL G
Sbjct: 251 VQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHG 310
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I+I FC MG L+ + + K G + +VI + L+ R + + L
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151
Query: 248 VCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ + GC P++ +N I + + +A L M GI P+ VTY VI G C++
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D AK V+ M+ R + P+ Y +IH G + M ++ P T +
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 367 LLEGLKKNNQ 376
LL+ L KN +
Sbjct: 272 LLDYLCKNGR 281
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 145/324 (44%), Gaps = 7/324 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFY 139
+F + L R D + +L+ + + +G + ++YG G + A + F+
Sbjct: 373 SFGALIDALCKLGRVD--DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430
Query: 140 DMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
++ G C V + E R ++A + L+++ + ++ ++ S+N ++ C
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR--LIDLMIRVGVRPNVISYNTLVAGHCL 488
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G +D+A ++ M G+KP+ TYT L+ + K R + L+ M+ KG P +AT
Sbjct: 489 TGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVAT 548
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N + L R +AN+L M + D TYN+++ G C++ +D A K++ +
Sbjct: 549 YNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLC 608
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
+ + + MI L + G A + VP V T + E L +
Sbjct: 609 SKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLG 668
Query: 379 KANTIMALVQRRVPHFSSNQLSAF 402
+ + + + +++ +S+ L+A
Sbjct: 669 EFDGLFSAMEKSGTAPNSHMLNAL 692
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA ++ A F M G K + N + + K + L E+ ++ D
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTH-GLEPDC 266
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +++ C+ G +A L M + G+KPDV Y L+ + + +L
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G PN FN+ K +A + M++ G+ PD V++ +I C+ G
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+D A ++ M+ + PN ++ ++++ LC G + A
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKA 425
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ I+++ +C+ +D AY + EM GV P V TY T++ ++ R N L+
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571
Query: 247 MV------------------CKGCF---------------PNL--ATFNVRIQHLVNKRR 271
M+ CK F P L TFN+ I L+ R
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGR 631
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A L + +G+ PD VTY L+ + G L ++SAM PN +
Sbjct: 632 KEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNA 691
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ L GD + A + +KN+ T S L+
Sbjct: 692 LVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G ++ A + F +M G V + + L +++ + + ++ ++ ++ D
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR-GVKPDN 231
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + G + ++ EM G++PD ITY L+ K+ R ++
Sbjct: 232 GTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDS 291
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++A + + + K + + + LM G+ P+ +N++ + +
Sbjct: 292 MFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAM 351
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A +++ M + L P+ + +I LC+ G + A + + + P++ S+
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS 411
Query: 367 LLEGL 371
L+ GL
Sbjct: 412 LVYGL 416
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 86/187 (45%), Gaps = 3/187 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQ 183
Y KA + A F +M + G V + N L L ++ R +A + +L + + +
Sbjct: 521 YCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR--TK 578
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI+++NI++ C+ +D+A+ + + + D +T+ +I A K R E L
Sbjct: 579 CDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDL 638
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ + G P++ T+ + ++L+ + + + L M++ G P+ N +++
Sbjct: 639 FATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLH 698
Query: 304 SGHLDMA 310
G + A
Sbjct: 699 RGDISRA 705
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN T+++ I R GL+ + G + + + ++KG C + +D A +
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 314 YSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ P+ Y T+I+ +EG AY + + M + P+V T + +++GL
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL- 206
Query: 373 KNNQPCKANTI 383
CKA +
Sbjct: 207 -----CKAQVV 212
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 160/404 (39%), Gaps = 62/404 (15%)
Query: 10 FCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKA 69
+CH A A N + E LV+K A L AE P F+A
Sbjct: 1650 WCHGRHGYTHTAFAFNRLL----------EFLVNKRQYKRAHQMLIAESKPSS----FQA 1695
Query: 70 NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAG 129
NA I Y ED +R A A LLEH K I+ K G
Sbjct: 1696 NAFTYSTIVRGYC-EDGETRQALA--------LLEHMKKAEVPANAKLYNIILTHLCKHG 1746
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
K A+D + M C + + N + L + L+ Q L+E+ + DI ++
Sbjct: 1747 KEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQG-LVEMMQARECPTDIVTY 1805
Query: 190 NIVIKAFCEMG----ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
N +I C G +++A+ + EM G P +TYT +I A + E + +
Sbjct: 1806 NTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLD 1865
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
LM GC +L T+N+ I +A L M G PD VTYN ++ GFC++G
Sbjct: 1866 LMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAG 1925
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQT---------------------------------- 331
++ A K+++ M R + PN + Y +
Sbjct: 1926 KVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVA 1985
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+I +C+ G L + + ++ ++K + P++ T + + E L K +
Sbjct: 1986 LISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKES 2029
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
FD+ ++N++I F + G++DKA + VEM G PDV+TY +++ F K + E N L
Sbjct: 1874 FDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKL 1933
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M +G FPN T+ + R A+ + M++ G+ D ++Y +I C+
Sbjct: 1934 FAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICK 1992
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G + ++ ML + PN + + L +E + + A IM ++ +++ P ++
Sbjct: 1993 LGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSPPLN 2051
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN----RPEIG 240
DI+++NI+I A C++G L+ A ++ MQ D++TY TLI + R E
Sbjct: 1766 DIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERA 1825
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ MV KG P T+ V I L+ + QA K++ LM G D VTYN++I
Sbjct: 1826 FRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINR 1885
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F ++G +D A ++ M P R +P
Sbjct: 1886 FAKAGMMDKAMDLFVEM------PTRGC-----------------------------IPD 1910
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRR 390
V T +++++G K + +AN + A ++ R
Sbjct: 1911 VVTYNSIVDGFCKAGKVEEANKLFAEMKAR 1940
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 259 FNVRIQHLVNKRRSWQANK-LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
FN ++ LVNKR+ +A++ L+ + + + TY+ +++G+C G A + M
Sbjct: 1664 FNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHM 1723
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ N K+Y ++ +LC+ G A + + P + T + L+ L K +
Sbjct: 1724 KKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRL 1783
Query: 378 CKANTIMALVQRR 390
A ++ ++Q R
Sbjct: 1784 EDAQGLVEMMQAR 1796
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 7/314 (2%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + + L D + L EH KS+ + +L G + G ++ AM
Sbjct: 9 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECS--PSMVTYNTLLDGLFRTGKLERAMA 66
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F +M L V S N + L + ++ F ++ ++ ++ +++++I
Sbjct: 67 LFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR--CSPNVITYSVLIDGL 123
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ + +A ++ M+ G PDVITYT L+ K+++ + M+ GC PNL
Sbjct: 124 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 183
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+N + L RR A LM M G P+ VTY +I G C+ G + A + +
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
M+ + P+ IY +I+ LC+ + + + + ++ P V T S+++ GL ++N+
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303
Query: 377 PCKANTIMALVQRR 390
+A ++ V+ R
Sbjct: 304 LDEACRLLLYVKSR 317
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 114/249 (45%), Gaps = 2/249 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A DM G + N + L ++ + A L I+ D+
Sbjct: 230 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG-GIKPDV 288
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ VI C LD+A +++ ++ G PDVI Y+TLI K + + L+ +
Sbjct: 289 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC ++ T++ I L R +A+ L+ M R G P +TYN +IKG C H
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTIS 365
LD A ++ M P+ Y +IH +C+ + A + M N V P T S
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS 468
Query: 366 ALLEGLKKN 374
LLEGLKK+
Sbjct: 469 ILLEGLKKS 477
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 5/300 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N + + L A R LLE K+ +G I +++ G K + A +
Sbjct: 112 NVITYSVLIDGLCKANRVSQAVELLESMKA--RGCSPDVITYTILVDGLCKESKVAAAWE 169
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+M GC + + N+ L L +R + A + ++ + ++ ++ +I
Sbjct: 170 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGL 228
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C++G + A ++ +M G PD++ Y LI+ K ++ + L V G P++
Sbjct: 229 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 288
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ I L R +A +L+ ++ G PD + Y+ +I G C++G +D A +Y
Sbjct: 289 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
M G + Y T+I LC+ G + A+++ ++ PS T ++L++GL N
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M+ G +P+V+TY +LI K+N P+ L+ M C P++ T+N + L R
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF---R 57
Query: 272 SWQANKLMGLMQRF--GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + + M L Q D +++N+++ G CR+G ++ A + + M R PN Y
Sbjct: 58 TGKLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITY 116
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I LC+ + A + + + P V T + L++GL K ++
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 163
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 167 KAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K +AF L EV D+ +++ +I C+ G +D+A+L++ M ++G P +TY
Sbjct: 338 KVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 397
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN-KRRSWQANKLMGLMQR 284
+LI N + L M C P+ T+N+ I + +R A M
Sbjct: 398 SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMID 457
Query: 285 FGIEPDEVTYNLVIKGFCRSGHL 307
G+ PD +TY+++++G +S L
Sbjct: 458 NGVIPDHITYSILLEGLKKSKDL 480
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN+ T+N I L +A +L M+ P VTYN ++ G R+G L+ A
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ ML RR + + ++ LC+ G A + M P+V T S L++G
Sbjct: 65 MALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFR-KMDDRCSPNVITYSVLIDG 122
Query: 371 LKKNNQPCKANTIMALVQRR 390
L K N+ +A ++ ++ R
Sbjct: 123 LCKANRVSQAVELLESMKAR 142
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K G + A D M G + V + NA + L D +A++ F V + F
Sbjct: 281 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD-EAVKVFDTMVCKGF--AP 337
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ +I +C++ ++KA + EM + + P+ +TY+TL+ R + L+
Sbjct: 338 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+ ++ + + +L RR +A L+ ++ ++PD Y +VI G CR+
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN Y MI+ LCQ+G A + + +K + P+ T
Sbjct: 458 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517
Query: 365 SALLEGLKKNNQPCKA 380
+ + G +NN+ +
Sbjct: 518 NLITRGFLRNNETLRG 533
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 9/300 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N F + L + + HL + K + +G + + ++ G K G A+
Sbjct: 128 NIATFNTLIRGLCVEGKIGEVLHLFD--KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 185
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIK 194
M C+ V + + L + R + QAF + E H I IF++N +I
Sbjct: 186 LLRSMEQGNCQPDVVVYTSIIDSLCKDR--QVTQAFNL-FSEMIHQGISPSIFTYNSLIH 242
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A C + ++ EM + P+V+ ++T++ A K+ + + + ++M+ +G P
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N+ T+N + + +A K+ M G PD V+Y+ +I G+C+ ++ A ++
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
M + L+PN Y T++H LC G A + + + + +P + LL+ L KN
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 110/213 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I +I++ NI+I +FC + L A+ V+ ++ KLG +P++ T+ TLI + +
Sbjct: 86 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L + A +L+ M++ +PD V Y +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+ + + P+ Y ++IH LC ++ + + +
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+P+V S +++ L K + +A+ ++ ++ +R
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR 298
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 7/246 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + H MD+F G + +LN + + L + L ++ + H Q
Sbjct: 75 YSTVLSLSHQMDSF------GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGH-QP 127
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FN +I+ C G + + + +M G +P+V+TY TLI+ K L
Sbjct: 128 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 187
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C P++ + I L R+ QA L M GI P TYN +I C
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ + M+ ++MPN I+ T++ LC+EG A+ + +K+ P+V T
Sbjct: 248 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 307
Query: 365 SALLEG 370
+AL++G
Sbjct: 308 NALMDG 313
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ I++ C+ LD+A ++ ++ + PD+ YT +I + E L+
Sbjct: 408 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 467
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+ + I L + +A+KL G M+R G P+ TYNL+ +GF R+
Sbjct: 468 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 527
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++ ML R + ++ L +G
Sbjct: 528 NETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A M + P + +T L+ + K L + M G PN+ T N+
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + +R A ++ + + G +P+ T+N +I+G C G + ++ M+G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
PN Y T+I+ LC+ G + A + + + N P V +++++ L K+ Q +A
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 1/191 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A+ F++M G S L L ++R L A L + E ++ DI
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI-EGSNMDPDIQ 445
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ IVI C G L+ A + + G+ P+V TYT +I+ + + L+ M
Sbjct: 446 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG PN T+N+ + + + + +L+ M G D T ++++ G
Sbjct: 506 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 565
Query: 308 DMAKKVYSAML 318
K++ S L
Sbjct: 566 QSVKQILSEFL 576
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D + L+ E I+ D+ FN +I + C+ +D
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTD-LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM+ G++P+V+TY++LIS R + L + M+ K PNL TFN I
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TYN ++ GFC LD AK+++ M+ + P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ Y T+I C+ + ++ + V T + L++GL
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I DIF++N ++ FC LDKA + M PDV+TY TLI F K R E
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G + T+ IQ L + A K+ M G+ PD +TY++++
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C +G L+ A +V+ M + + IY TMI +C+ G + + + C S+ K
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGV 536
Query: 358 VPSVDTISALLEGL 371
P+V T + ++ GL
Sbjct: 537 KPNVVTYNTMISGL 550
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + + A L+ M+ IE D V +N +I C+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A ++ M + + PN Y ++I LC G ++ A + D ++K P++ T +
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 335 ALIDAFVKEGKFVEAEKL 352
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ ++ + EM G+ D +TYTTLI + D + ++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + +A ++ MQ+ I+ D Y +I+G C++
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D ++ ++ + + PN Y TMI LC + AY + K + +P+ T
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 579 NTLIRAHLRDGDKAASAELI 598
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I ++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G D+A + + M ++ + I+ T+I LC+ + A + K+
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ ++++++
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 98/194 (50%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +V+ C+ G D A ++ +M+ ++ DV+ + T+I + K +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L + R A++L+ M I P+ VT+N +I F
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G A+K+Y M+ R + P+ Y ++++ C + A M + + K+ P V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 363 TISALLEGLKKNNQ 376
T + L++G K+ +
Sbjct: 402 TYNTLIKGFCKSKR 415
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F + +K I+ DI+ + +I+ C+ G +D + + + GVKP+V+TY T
Sbjct: 488 KALEVF--DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+IS + L M G PN T+N I+ HL + ++ A
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----DNRPEIGNGLWNLMVCKGCFPNLA 257
LD A + M K P ++ + L+SA K D +G + L + G L
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG----LY 121
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N+ I + + A L+G M + G EP VT + ++ G+C + A + M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ P+ + T+IH L + A + +++ P++ T ++ GL K
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK---- 237
Query: 378 CKANTIMAL 386
+ +T +AL
Sbjct: 238 -RGDTDLAL 245
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ MV P++ FN + + ++ L MQR I TYN++I F
Sbjct: 71 GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR + +A + M+ P+ ++++ C + A + ++ + P
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
T + L+ GL +N KA+ +ALV R V L + +++
Sbjct: 191 ITFTTLIHGLFLHN---KASEAVALVDRMVQRGCQPNLVTYGVVVN 233
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 103/191 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V+++ TL++ + + + G L N
Sbjct: 125 LYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKN 184
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN++ M G+ P+ VT+ +I G C++G
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNG 244
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A+ + + K P T +
Sbjct: 245 RVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 304
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 305 TLIDGCCKEGD 315
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + +G +D+ + + M GV+PDV TY+ LI+ K+++ +
Sbjct: 153 KWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMD 212
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N +++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 213 DANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLI 272
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
G C+ G L A + M + L P++ Y T+I C+EGD A+
Sbjct: 273 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAF 320
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 9/268 (3%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I A F + +G + +V S N + D+ + F L
Sbjct: 127 FFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMD--EGFRLKN 184
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNG 244
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 245 RVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 304
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQE + A + ++ +
Sbjct: 305 TLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSV 364
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTI 383
P T + ++ N+ CK +
Sbjct: 365 GLKPDTGTYTMII------NEFCKKGDV 386
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
A + + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 74 AXECYRLTREHKFWVPFD--TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNIL 131
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F K+ + ++N + G P++ +FN + + + +L M G+
Sbjct: 132 MHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGV 191
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ +D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 192 QPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 251
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A+ ++
Sbjct: 252 IYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLI 288
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I C+ G L +A+ ++ EM G+KPD ITYTTLI K+ E
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHR 323
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + + + I L + R A K++ M G++PD TY ++I FC+
Sbjct: 324 KRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKK 383
Query: 305 GHLDMAKKVYSAM 317
G + K+ M
Sbjct: 384 GDVWTGSKLLKEM 396
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG+ + ++ F M G +V + N+ L +L + E+ + +
Sbjct: 148 YGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTP 207
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL- 243
D ++FN +I FC+ ++D+A+ + +M+ PDV+TY T+I + + +I + +
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 244 ------------------------------------WNLMVCKGCFPNLATFNVRIQHLV 267
++ M+ +G PN T+N I+ L
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327
Query: 268 NKRRSWQ-ANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
R + + L+G F PD T+N++IK C +GHLD A KV+ ML +L P+
Sbjct: 328 EAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
Y +I LC +F+ A + + +K + D L
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
L+ L +R+L + FL + + + ++ FN +I+++ G+ ++ + M++
Sbjct: 107 LEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQ 166
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM-VCKGCFPNLATFNVRIQHLVNKRRSW 273
+G+ P V+T+ +L+S K R + + L++ M G P+ TFN I
Sbjct: 167 MGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVD 226
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR--RLMPNRKIYQT 331
+A ++ M+ + PD VTYN +I G CR+G + +A V S ML + + PN Y T
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ C + + + A ++ D + + P+ T + L++GL +
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE 328
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH-IQFDIFSF 189
I A+ F+DM G K + N +K L+E+ I+ L+ + F D +F
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN---- 245
NI+IKA C+ G LD A V EM + + PD +Y+ LI N + L+N
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 246 ---LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ C P A +N ++L ++ QA K+ + + G++ D +Y +I G C
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHC 475
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G A ++ ML R +P+ + Y+ +I L + G+ LA+ + ++ +++P
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 363 TISALLEGLKK 373
T ++L L K
Sbjct: 536 TFHSVLAELAK 546
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 54/298 (18%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQ 183
+ K M+ A F DM LY C V + N + L + +K L + +K +
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEI--- 239
++ S+ +++ +C +D+A LV +M G+KP+ +TY TLI + +R EI
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 240 ---GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
GN + P+ TFN+ I+ + A K+ M + PD +Y++
Sbjct: 339 LIGGNDAFTTFA-----PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLM-------PNRKIYQTMIHYLC------------ 337
+I+ C D A+ +++ + + ++ P Y M YLC
Sbjct: 394 LIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 453
Query: 338 ----------------------QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+EG F AY + +++ +VP ++T L++GL K
Sbjct: 454 RQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN I+ N ++ KL M++ GI P +T+N ++ + G MA ++ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM- 199
Query: 319 GRR---LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
RR + P+ + T+I+ C+ + A+ + KD + P V T + +++GL +
Sbjct: 200 -RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 376 QPCKANTIMALVQRRVPHFSSNQLS 400
+ A+ +++ + ++ N +S
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVS 283
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 148/347 (42%), Gaps = 19/347 (5%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P L+KL KAE+ P +F A + F + R+A L
Sbjct: 6 KSLSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGL-----L 60
Query: 103 LEHQKSLPQGRR----EGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAAL 157
L H + E + ++ Y K M A+ F M H++GC T++S N L
Sbjct: 61 LAHAPRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLL 120
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
ES + F + E + ++ ++N+++K C+ G +K ++ M G+
Sbjct: 121 NAFVESHQWARAENFF-KYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGM 179
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD ITY TLI K +++ M +G P++ +N+ I + +A +
Sbjct: 180 SPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGE 239
Query: 278 LMG-LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ L++ + P V+YN++I G C+ G +++ M + Y +IH L
Sbjct: 240 MWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGL 299
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ GD A + ++ + + P V T +A+L GL CKA +
Sbjct: 300 SEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGL------CKAGNV 340
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 2/242 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A M+ GCK N + + L + E+ K +
Sbjct: 438 KEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGK-GCSLTV 496
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+NI+I +AY + EM + G KPD+ITY+TLI Y+ N + LW+
Sbjct: 497 VSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G P++ +N+ I L + + A +L +++ + VT+N +++GF + G+
Sbjct: 557 FLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGN 615
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+MA K+++ +L L P+ Y + LC G A D++ + ++P+ T +
Sbjct: 616 CEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNI 675
Query: 367 LL 368
L+
Sbjct: 676 LV 677
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
+N AL+VL E+ + + D F+++ +I A C+ G LD+A V+ M
Sbjct: 405 VNRALQVLEEAEHREG------------GMDVDEFAYSSLINALCKEGRLDEADGVVELM 452
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
K G K + LI F K ++ + ++ M KGC + ++N+ I L+ R
Sbjct: 453 NKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERF 512
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A + M G +PD +TY+ +I G S +D A +++ L P+ +Y +
Sbjct: 513 REAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIV 572
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
IH LC G A + +K V V T + ++EG K A+ I A
Sbjct: 573 IHRLCSSGKVEDALQLYSTLRQKKCVNLV-THNTIMEGFYKVGNCEMASKIWA 624
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 61/294 (20%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCK 147
L GAR+ +++ + +G R + ML G KAG ++ + + +M C
Sbjct: 305 LGGARKV--------YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMG--KCS 354
Query: 148 -RTVKSLNAALKVLTES---RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
R V+S N LK L E+ D + L+E D ++ +V+ C G ++
Sbjct: 355 LRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEA--------DSATYGVVVHGLCWNGYVN 406
Query: 204 KAYLVM--VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+A V+ E ++ G+ D Y++LI+A K+ R + +G+ LM +GC FN
Sbjct: 407 RALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGC-----KFNS 461
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ N++I GF + LD A KV+ M G+
Sbjct: 462 HV------------------------------CNVLIDGFVKHSKLDSAVKVFREMSGKG 491
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
Y +I+ L + F AY + ++K W P + T S L+ GL ++N
Sbjct: 492 CSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESN 545
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P + +FN + V + +A + + P+ TYN+++K C+ G +
Sbjct: 108 GCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKG 167
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + + M G + P+R Y T+I + + GD A + + ++ P V + +++G
Sbjct: 168 RGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDG 227
Query: 371 LKKNNQPCKANTIMALVQRRVPHFSS 396
K KA + + R F S
Sbjct: 228 FFKRGDFVKAGEMWERLLREELVFPS 253
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 2/252 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + G + + N + L L A L ++ K I + N ++ FC
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM-KLGYGPSIVTLNSLLNGFCHGN 149
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ +A ++ +M ++G +PD +T+TTL+ ++ N+ L MV KGC P+L T+
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L + A L+ M++ IE D V Y+ VI C+ H+D A +++ M +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ P+ Y ++I LC G ++ A + D +++ P+V T ++L++ K + +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 381 NTIM-ALVQRRV 391
+ ++QR +
Sbjct: 330 EKLFDEMIQRSI 341
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + GC+ + + A + L + R + L+ EK I+ D+ ++ VI + C+
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCK-RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+D A + EM G++PDV TY++LIS R + L + M+ + PN+ TFN
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I + + +A KL M + I+P+ VTYN +I GFC LD A+++++ M+ +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+P+ Y T+I+ C+ + +D ++ V + T + L+ G
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+F+++ +I C G A ++ +M + + P+V+T+ +LI AF K+ +
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M+ + PN+ T+N I R +A ++ LM PD VTYN +I GF
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ + +++ M R L+ N Y T+IH Q D + A ++ K + P++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T + LL+GL KN + KA + +Q+
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ E+ I ++ +FN
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFN 314
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM + + P+++TY +LI+ F +R + ++ LMV K
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P++ T+N I ++ +L M R G+ + VTY +I GF ++ D A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ + PN Y T++ LC+ G A ++ + K P + T + + EG
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 495 M------CKAGKV 501
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E E + +++++NI+I C L A ++ +M KLG P ++T +L++ F
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
NR L + MV G P+ TF + L ++ +A L+ M G +PD VTY
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
VI G C+ G D+A + + M ++ + IY T+I LC+ + A + +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P V T S+L+ L + A+ +++ +++R++
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ VI C+ G D A ++ +M+K ++ DV+ Y+T+I + K +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG P++ T++ I L N R A++L+ M I P+ VT+N +I F
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K++ M+ R + PN Y ++I+ C + A + + K+ +P V
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T + L+ G CKA ++
Sbjct: 382 TYNTLINGF------CKAKKVV 397
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I FC+ + + +M + G+ + +TYTTLI F++ + + ++
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +Q+ +EPD TYN++ +G C++
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ ++ + + P+ Y TMI C++G AY + + +P T
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 559 NTLIRAHLRDGDKAASAELI 578
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 157/381 (41%), Gaps = 15/381 (3%)
Query: 8 RRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLF 67
+RF H A+ + L I L+ RE L AL+ LK + + ++
Sbjct: 5 KRFVHLRKASPS--FCLRGIYFSGLSYDGYREKL-----SRNALLHLKLDEAVDLFGEMV 57
Query: 68 KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYG 126
K+ IV F +S +A ++FD + E + L + IM+
Sbjct: 58 KSRPFPSIV-----EFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNL-YTYNIMINCLC 111
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ + A+ M G ++ +LN+ L + A + ++ E + Q D
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY-QPDT 170
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F ++ + +A ++ M G +PD++TY +I+ K P++ L N
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M ++ ++ I L R A L M GI PD TY+ +I C G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A ++ S ML R++ PN + ++I +EG A + + ++++ P++ T ++
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 367 LLEGLKKNNQPCKANTIMALV 387
L+ G +++ +A I L+
Sbjct: 351 LINGFCMHDRLDEAQQIFTLM 371
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 3/206 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ-AFLMEVPEKFHIQ 183
+ KA + M+ F DM G + + ++ D Q F V + H
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP- 448
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+I ++N ++ C+ G L+KA +V +QK ++PD+ TY + K + E G L
Sbjct: 449 -NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ + KG P++ +N I K +A L M+ G PD TYN +I+ R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIY 329
G + ++ M R + Y
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTY 593
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 2/249 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D + L+ E I+ D+ FN +I + C+ +D
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTD-LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 240
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM+ G++P+V+TY++LIS R + L + M+ K PNL TFN I
Sbjct: 241 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 300
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TYN ++ GFC LD AK+++ M+ + P
Sbjct: 301 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 360
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ Y T+I C+ + ++ + V T + L++GL + A +
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420
Query: 385 -ALVQRRVP 392
+V VP
Sbjct: 421 KQMVSDGVP 429
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I DIF++N ++ FC LDKA + M PDV+TY TLI F K R E
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G + T+ IQ L + A K+ M G+ PD +TY++++
Sbjct: 380 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C +G L+ A +V+ M + + IY TMI +C+ G + + + C S+ K
Sbjct: 440 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGV 498
Query: 358 VPSVDTISALLEGL 371
P+V T + ++ GL
Sbjct: 499 KPNVVTYNTMISGL 512
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 117 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 176
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + + A L+ M+ IE D V +N +I C+
Sbjct: 177 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 236
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A ++ M + + PN Y ++I LC G ++ A + D ++K P++ T +
Sbjct: 237 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 296
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 297 ALIDAFVKEGKFVEAEKL 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ ++ + EM G+ D +TYTTLI + D + ++
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + +A ++ MQ+ I+ D Y +I+G C++
Sbjct: 421 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 480
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D ++ ++ + + PN Y TMI LC + AY + K + +P+ T
Sbjct: 481 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 540
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 541 NTLIRAHLRDGDKAASAELI 560
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I ++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 69 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 128
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 129 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 188
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G D+A + + M ++ + I+ T+I LC+ + A + K+
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 248
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ ++++++
Sbjct: 249 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F + +K I+ DI+ + +I+ C+ G +D + + + GVKP+V+TY T
Sbjct: 450 KALEVF--DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+IS + L M G PN T+N I+ HL + ++ A
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 557
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----DNRPEIGNGLWNLMVCKGCFPNLA 257
LD A + M K P ++ + L+SA K D +G + L + G L
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG----LY 83
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N+ I + + A L+G M + G EP VT + ++ G+C + A + M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ P+ + T+IH L + A + +++ P++ T ++ GL K
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK---- 199
Query: 378 CKANTIMAL 386
+ +T +AL
Sbjct: 200 -RGDTDLAL 207
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ MV P++ FN + + ++ L MQR I TYN++I F
Sbjct: 33 GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 92
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR + +A + M+ P+ ++++ C + A + ++ + P
Sbjct: 93 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 152
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRV 391
T + L+ GL +N KA+ +ALV R V
Sbjct: 153 ITFTTLIHGLFLHN---KASEAVALVDRMV 179
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 36/290 (12%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GK G A++ F DM GC+ + + L + + A+ A L + E+ Q +
Sbjct: 56 GKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGE-TALAAGLFKKMEEAGCQLN 114
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +++ +I + C+ +++A + M+ + P + TYT+LI +R + + L N
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN---------- 295
M PN+ TFNV + + + A ++ M G+EPD VTYN
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234
Query: 296 -------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
++I G+C++ +D AK++++ M+ + PN Y
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
T+IH LCQ G A + K+ +P++ T + LL+G K KA
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKA 344
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D F M T+ + + ++ L K A L E+ +I ++ +FN
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT-SLNIMPNVVTFN 189
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+++ FC+ G + A V+ M ++GV+PDV+TY +L+ + L+++M+ K
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITK 249
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P++ ++++ I +R +A +L M G P+ V+YN +I G C+ G L A
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA 309
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ ++ M +PN Y ++ C++G A+
Sbjct: 310 QDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+FS++I+I +C+ +D+A + EM G P+ ++Y TLI + R L+
Sbjct: 254 DVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLF 313
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G PNL T+ + + + +A +L MQ ++P+ V YN+++ C+S
Sbjct: 314 KNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKS 373
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G+L A++++S + L PN +IY T+I+ LC+EG
Sbjct: 374 GNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEG 409
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ NI+I FC++ +D + V+ + KLG++P ++T+TTLI+ K + L++ M
Sbjct: 12 TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +GC P+ T+ I L + A L M+ G + + VTY+ +I C+ +
Sbjct: 72 VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRV 131
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A ++S M + + P Y ++I LC + A + + N +P+V T + L
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVL 191
Query: 368 LEGLKKNNQPCKANTIM 384
++ K + A ++
Sbjct: 192 VDTFCKEGKVLAAEGVL 208
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +Q I +F +I ++G +A + +M G +PD TYTT+I+ K
Sbjct: 38 KLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETA 97
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ GL+ M GC N+ T++ I L RR +A + M+ I P TY +I
Sbjct: 98 LAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLI 157
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
+G C A + + M +MPN + ++ C+EG A + K +
Sbjct: 158 QGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE 217
Query: 359 PSVDTISALLEG 370
P V T ++L+ G
Sbjct: 218 PDVVTYNSLMYG 229
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 1/221 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GCK V S + + +++ + + E+ + ++ S+N +I C++G L +
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNV-SYNTLIHGLCQLGRLRE 308
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + M G P++ TY L+ F K L+ M PNL +N+ +
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ A +L + G++P+ Y +I G C+ G LD A + + M P
Sbjct: 369 AMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ Y +I Q D + A + + + ++ T +
Sbjct: 429 DEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G PN T N+ I +R ++ + G++P VT+ +I G + G A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ M+ R P+ Y T+I+ LC+ G+ LA + K + +V T S L+
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 371 LKK 373
L K
Sbjct: 125 LCK 127
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 58 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKW 116
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ +++V I L + + A
Sbjct: 117 GLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDA 176
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C+ G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 177 NELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 236
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
LC++GD A + + K P T + L++G K
Sbjct: 237 LCKKGDLKQANDLIDEMGMKGLKPDKITYTTLIDGCCKEG 276
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N + + D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M
Sbjct: 90 FNILMHRFCKDGDIRVAQS-VFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAM 148
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
GV+PDV +Y+ LI+ K+++ + N L++ M+ KG PN TF I K R
Sbjct: 149 LASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRV 208
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A ++ M + PD +TYN +I G C+ G L A + M + L P++ Y T+
Sbjct: 209 DLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTL 268
Query: 333 IHYLCQEGDFNLAY 346
I C+EG+ + A+
Sbjct: 269 IDGCCKEGNLDTAF 282
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H+ F +N++I +C G + + L++ EM+ G P ++TY +LI+ K E
Sbjct: 995 HVVF----YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1050
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G PN+ +N I L N R + QA ++ M G +PD +T+N ++ G
Sbjct: 1051 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTG 1110
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C GH+ A+ + R L PN+ Y +IH C G+ +A + + M + P
Sbjct: 1111 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1170
Query: 361 VDTISALLEGL 371
V T AL+ GL
Sbjct: 1171 VVTFGALIHGL 1181
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 2/224 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
AM M GC + + N + L ++ + FL E + + + S+ +
Sbjct: 1084 QAMVILKQMFASGCDPDIITFNTLMTGLCHEGHVRKAEHFLREAIRR-ELNPNQLSYTPL 1142
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I FC G L A ++VEM G PDV+T+ LI + + M +
Sbjct: 1143 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1202
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FP++ +NV I L KR A ++ M ++PDE Y +I GF RS +L A+K
Sbjct: 1203 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1262
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ M + + P+ MI CQ G + A I+C +M+K
Sbjct: 1263 IFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEA-ILCMSNMRKQ 1305
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ +I + G L+K + +EM+K G P+V Y ++I A +
Sbjct: 1031 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1090
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC P++ TFN + L ++ +A + R + P++++Y +I GFC G
Sbjct: 1091 QMFASGCDPDIITFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1150
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L +A + M+GR P+ + +IH L G + A I+ + ++ P V+ +
Sbjct: 1151 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1210
Query: 366 ALLEGL-KKNNQPCKANTIMALVQRRV 391
L+ GL KK P N + ++++ V
Sbjct: 1211 VLISGLCKKRMLPAAKNILEEMLEKNV 1237
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--HIQ 183
GK G ++ F +M G V+ N+ + L R A QA ++ + + F
Sbjct: 1042 GKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCR--SATQAMVI-LKQMFASGCD 1098
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI +FN ++ C G + KA + E + + P+ ++YT LI F + + L
Sbjct: 1099 PDIITFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1158
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P++ TF I LV + +A + M + PD YN++I G C+
Sbjct: 1159 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1218
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
L AK + ML + + P+ +Y T+I + + A + + K P + +
Sbjct: 1219 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVS 1278
Query: 364 ISALLEG 370
+A+++G
Sbjct: 1279 CNAMIKG 1285
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 2/265 (0%)
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
DT + M L G T L A + ++ L V E++ ++ N ++K
Sbjct: 876 DTLHSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLLEVTHCNHLLKL 935
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
E D + EM D + L+ + R E G L GC P+
Sbjct: 936 LVEQRRWDDGRKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 995
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ +NV I + + L+G M+ G P VTY +I + G L+ ++
Sbjct: 996 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1055
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M R PN +IY ++I LC A ++ K P + T + L+ GL
Sbjct: 1056 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTGLCHEG 1115
Query: 376 QPCKANTIMALVQRRVPHFSSNQLS 400
KA + RR + NQLS
Sbjct: 1116 HVRKAEHFLREAIRR--ELNPNQLS 1138
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + + +M G T+ + + + L + DL+ I + +E+ K
Sbjct: 1006 YCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM-RKRGFSP 1064
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N VI A C +A +++ +M G PD+IT+ TL++ +
Sbjct: 1065 NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLMTGLCHEGHVRKAEHFL 1124
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + PN ++ I + A+ L+ M G PD VT+ +I G +
Sbjct: 1125 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1184
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V M R++ P+ IY +I LC++ A + ++ ++KN P
Sbjct: 1185 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1244
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++G ++ A I ++ +
Sbjct: 1245 ATLIDGFIRSENLGDARKIFEFMEHK 1270
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D M G + V + N+ + L S + A ++ + I D+ +F+
Sbjct: 194 VDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW-GVSARILSDMMRMGIHPDVITFS 252
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I F + G L +A EM + V P+++TY +LI+ + + N MV K
Sbjct: 253 AMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G FPN T+N + +R A K++ +M G++ D TYN + +G+C++G + A
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAA 372
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+KV + M+ ++P+ + ++ LC+ G A + +D K V + T + +++G
Sbjct: 373 EKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKG 432
Query: 371 LKKNNQPCKANTI 383
+ CKAN +
Sbjct: 433 M------CKANKV 439
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I D++SF+ +I FC L A + +M KLG +P ++T+ +L++ F NR
Sbjct: 100 EILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRI 159
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ L + +V G PN+ +N I L R+ A ++ M++ GI PD +TYN +
Sbjct: 160 QEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSL 219
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I SG ++ ++ S M+ + P+ + MI +EG A + ++++
Sbjct: 220 ITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSV 279
Query: 358 VPSVDTISALLEGL 371
P++ T ++L+ GL
Sbjct: 280 DPNIVTYNSLINGL 293
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 85/155 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N +I + CE +D A V+ M+K+G++PDVITY +LI+ + + + +
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P++ TF+ I + + +A K M + ++P+ VTYN +I G C
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G LD AKKV + M+ + PN Y T+++ C+
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKS 331
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + I +F ++ FC + + +A ++ ++ LG +P+V+ Y T+I + ++ + +
Sbjct: 136 KLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVD 195
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ N M G P++ T+N I L + + + +++ M R GI PD +T++ +I
Sbjct: 196 TALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMI 255
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F + G L AKK Y M+ R + PN Y ++I+ LC G + A + + K +
Sbjct: 256 DVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFF 315
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQ 388
P+ T + L+ G K+ + A I+ ++
Sbjct: 316 PNAVTYNTLVNGYCKSKRVDDAMKILCVMS 345
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ +C+ +D A ++ M GV D TY TL + + + + M
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G P++ TFN+ + L + +A + +Q+ +TYN++IKG C++ +
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMI 333
+ A ++ ++ + + P+ Y TM+
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMM 465
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI++FN+++ CE G ++KA + + ++QK +ITY +I K N+ E L+
Sbjct: 387 DIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLF 446
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ KG P++ T+ + L KR +A++L M++
Sbjct: 447 CSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D F++N + + +C+ G + A V+ M GV PD+ T+ L+ + + E
Sbjct: 349 VDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + T+N+ I+ + + A L + G+ PD +TY ++ G
Sbjct: 409 VKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468
Query: 302 CRSGHLDMAKKVYSAM 317
R A ++Y M
Sbjct: 469 RRKRLWLEAHELYRKM 484
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG A M G + + N L L E ++ L ++ +K
Sbjct: 363 YCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL-QKSETVV 421
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
I ++NI+IK C+ ++ A+ + + GV PDVITYTT++
Sbjct: 422 GIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMM 465
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 1/260 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I+ A+ F + G + V + + L ++R L ++ + I+ ++ ++N
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN-GIRPNVVTYN 226
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ CE+G A ++ +M K G++P+VIT+T LI AF K + L+ +M+
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
+P++ T+ I L R +A ++ LM+ G P+EVTY +I GFC+S ++
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K++ M + L+ N Y +I C G ++A + + P + T + LL+G
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406
Query: 371 LKKNNQPCKANTIMALVQRR 390
L N KA I +++R
Sbjct: 407 LCYNGYVEKALMIFKYMRKR 426
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ HA++ F M G + V + N+ + L E A+L+ K IQ ++ +F
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD-AAWLLRDMMKRGIQPNVITFT 261
Query: 191 IVIKAFCEMGILDKA---YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+I AF ++G + +A Y VM++M V PDV TYT LI+ R + ++ LM
Sbjct: 262 ALIDAFVKVGKIMEAKELYKVMIQMS---VYPDVFTYTALINGLCTYGRLDEARQMFYLM 318
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G +PN T+ I +R K+ M + G+ + +TY ++I+G+C G
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D+A++V++ M RR P+ + Y ++ LC G A ++ K K+ ++ T + +
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438
Query: 368 LEGLKK 373
++G+ K
Sbjct: 439 IQGMCK 444
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 173 LMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ME E + + D+F++ +I C G LD+A + M+ G P+ +TYTT
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LI F K R E G ++ M KG N T+ V IQ R A ++ M
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD TYN+++ G C +G+++ A ++ M R + N Y +I +C+ G A+
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452
Query: 347 IMCKDSMKKNWVPSVDTISALLEGL 371
+ K P+V T + ++ G
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGF 477
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK 179
R++ + K + F M + G + + N + + S FL ++ K
Sbjct: 87 RLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKM-MK 145
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ D+ +F ++ FC ++ A + ++ +G +P+V+TYTTLI K+
Sbjct: 146 LGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNH 205
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
++N M G PN+ T+N + L R A L+ M + GI+P+ +T+ +I
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALID 265
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
F + G + AK++Y M+ + P+ Y +I+ LC G + A M + P
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 360 SVDTISALLEGLKKNNQ 376
+ T + L+ G K+ +
Sbjct: 326 NEVTYTTLIHGFCKSKR 342
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 88/173 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I FC+ ++ + EM + G+ + ITYT LI + RP++ ++N M
Sbjct: 329 TYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ P++ T+NV + L +A + M++ ++ + VTY ++I+G C+ G +
Sbjct: 389 GSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKV 448
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ A ++ ++ + + PN Y TMI C+ G + A + K + ++P+
Sbjct: 449 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I F ++ +M D + +MQ LG+ P + T +++ + ++P +
Sbjct: 81 SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFL 140
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P+L TF + + R A L + G P+ VTY +I C++
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
HL+ A ++++ M + PN Y +++ LC+ G ++ A + +D MK+ P+V T
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 365 SALLEGLKK 373
+AL++ K
Sbjct: 261 TALIDAFVK 269
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P ++ +T L+S K R ++ L+ M G P L T N+ + + + +A+
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G M + G EPD VT+ ++ GFC ++ A ++ ++G PN Y T+IH LC+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 339 EGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGL 371
N A + + M N + P+V T ++L+ GL
Sbjct: 200 NRHLNHA-VEIFNQMGDNGIRPNVVTYNSLVSGL 232
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A FY M G + + +S+ ++ E+ +K + + +
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVA-NTIT 364
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++I+ +C +G D A V +M PD+ TY L+ + E ++ M
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMR 424
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ N+ T+ + IQ + + A L + G++P+ +TY +I GFCR G +
Sbjct: 425 KREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIH 484
Query: 309 MAKKVYSAMLGRRLMPNRKI 328
A ++ M +PN +
Sbjct: 485 EADALFKKMKEDGFLPNESV 504
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 11/154 (7%)
Query: 232 YKDNRPEIGNGLWNL-----------MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
+ + R + NGL NL MV P++ F + + +R L
Sbjct: 47 FSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFE 106
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
MQ GI P T N+V+ CRS A M+ P+ + +++H C
Sbjct: 107 QMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWN 166
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
A + + + P+V T + L+ L KN
Sbjct: 167 RIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200
>gi|440577332|emb|CCI55338.1| PH01B019A14.7 [Phyllostachys edulis]
Length = 359
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 38/287 (13%)
Query: 46 LEPPALVKLKAE-RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE 104
L P ++K+ A RDP + + FK R N+ + + R+A ARRF +E LL
Sbjct: 36 LAPNEVLKIFANIRDPSLITRAFKRACTRRDYKPNETLYSLMIDRIACARRFGDVEELLA 95
Query: 105 HQKSLPQGRREGFIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+ + F R++ +YG A + A++T + M Y C + K+ N L +L
Sbjct: 96 RARIEKFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCK 155
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R + + P + + D FNI++K C++G D+A ++ EM K G P+V T
Sbjct: 156 RQYEVVHEVYSSAP-RLGVTLDTCCFNILVKGLCQLGKFDEAISLLHEMPKQGCLPNVNT 214
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+TL+ + + + +A +L M
Sbjct: 215 YSTLMHFLCQHGQVD-----------------------------------EAFELFERMW 239
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ I D V YN++I G CR G + A ++ +M PN YQ
Sbjct: 240 KEDIAADTVVYNILISGLCREGRVTKAFDLFKSMASEGCYPNSGTYQ 286
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N PE M C+P+ TFN + LV KR+ +++ R G+ D +
Sbjct: 121 NHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCCF 180
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N+++KG C+ G D A + M + +PN Y T++H+LCQ G + A+ + + K
Sbjct: 181 NILVKGLCQLGKFDEAISLLHEMPKQGCLPNVNTYSTLMHFLCQHGQVDEAFELFERMWK 240
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKA 380
++ + L+ GL + + KA
Sbjct: 241 EDIAADTVVYNILISGLCREGRVTKA 266
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+IK+FC G++ +A +++ E++K GV + I Y TL+ A+ K NR E GL+ M KG
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKG 396
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL-DMA 310
P ATFN+ + K + KLM MQ G++P+ +Y +I + + ++ DMA
Sbjct: 397 IKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMA 456
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M + P Y +IH G AY ++ ++ PS++T +ALL+
Sbjct: 457 ADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDA 516
Query: 371 LKKNNQPCKANTIMALVQR 389
++ I L++R
Sbjct: 517 FRRAGDTQTLMKIWKLMRR 535
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M G K KS + + +++ + A +K I+ S+ +I A+
Sbjct: 426 EMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVS 485
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G +KAY MQ+ G+KP + TYT L+ AF + + +W LM + TF
Sbjct: 486 GWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTF 545
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N + +A ++ G+ P +TYN+++ + R G ++ M
Sbjct: 546 NTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAA 605
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
L P+ Y TMI+ + DF+ A+ ++ +K V VD+ L
Sbjct: 606 HNLKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQVMDVDSYQKL 653
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 5/265 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME-VPEK 179
+L+G AGM++ AM F M GC + L + + + L + + E
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F + ++ +N +I +C +G L+ A V M G P+V TYT LIS F K + +
Sbjct: 208 F--EPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDR 265
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ MV G PN+ T+ IQ + + A +L+ M+ G+ P+E T +++I
Sbjct: 266 AMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLID 325
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C+ + A+ + +++ + + N +Y ++I LC+ G F A + + + + +VP
Sbjct: 326 ALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVP 385
Query: 360 SVDTISALLEGLKKNNQPCKANTIM 384
T S+L++GL + + +A ++
Sbjct: 386 DAHTYSSLIDGLCRQKELSEAMLVL 410
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 40/297 (13%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMD 136
+ + + V L GA R E LL ++ +G ++ ++ Y G ++ A+D
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLL--SDAMAEGFEPNVVVYNALIDGYCNVGDLELAVD 233
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F M + GC V++ + +I F
Sbjct: 234 VFERMDVNGCSPNVRT------------------------------------YTELISGF 257
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ LD+A ++ M G+ P+V+TYT LI D + + L M G PN
Sbjct: 258 CKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNE 317
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T +V I L R +A L+G + + GI+ +E+ Y +I G C++G A ++
Sbjct: 318 WTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQT 377
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ + +P+ Y ++I LC++ + + A ++ D M+K PS T + +++ L +
Sbjct: 378 LVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVR 434
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG++ HA F M L GC RT + A L L + ++ + + +
Sbjct: 117 YCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM-QADGCAP 175
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + ++ C G +A ++ + G +P+V+ Y LI + E+ ++
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC PN+ T+ I R+ +A L M G+ P+ VTY +I+G C
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A ++ +M L+PN +I LC+ A ++ ++K +
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVY 355
Query: 365 SALLEGLKKNNQPCKANTIM 384
++L++GL K + A+ +M
Sbjct: 356 TSLIDGLCKAGRFAAADRLM 375
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ + +C G+L A + V M G TYT L+ ++
Sbjct: 106 DSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVF 165
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P+ + + L R+ +A L+ G EP+ V YN +I G+C
Sbjct: 166 AGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNV 225
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L++A V+ M PN + Y +I C+ + A ++ + VP+V T
Sbjct: 226 GDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTY 285
Query: 365 SALLEGLKKNNQ 376
+AL++G + Q
Sbjct: 286 TALIQGQCSDGQ 297
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 8/241 (3%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
+ LNA L L R L +++F +P + ++ ++ +I A+C G L + +
Sbjct: 42 RCLNAFLMALARHRMLADMESFASRMPAR-----NLRTYTTLINAYCLAGDLPASKRHLS 96
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+ + G PD YT+ + + + L+ LM +GC T+ + L
Sbjct: 97 SLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAG 156
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+A + MQ G PD Y ++ G C +G A+ + S + PN +Y
Sbjct: 157 MVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN 216
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+I C GD LA + + P+V T + L+ G K+ K + M L R
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSR---KLDRAMMLFSRM 273
Query: 391 V 391
V
Sbjct: 274 V 274
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+F++ I ++++C G ++ A +M+ M GV P+++TY LI +
Sbjct: 453 IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAF 512
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRS----------WQANK---LMGLMQRFG-- 286
+ MV GC PN ++ V ++ L+ K S W+ + L GL++
Sbjct: 513 STFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKL 572
Query: 287 IEPDEV-TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
P E+ YN + CR LD AK + M L P+ +Y ++I C+ A
Sbjct: 573 QLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEA 632
Query: 346 YIMCKDSMKKNWVPSVDT----ISALLE 369
+K ++P +++ IS+L E
Sbjct: 633 LTFVDSMVKSGYIPQLESYRHIISSLCE 660
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++ +I C L +A LV+ +M + GV+P +TYT +I ++ + +
Sbjct: 386 DAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKIL 445
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P++ T+ + ++ ++ R A +M M G+ P+ VTYN +I G+
Sbjct: 446 DKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANL 505
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G A + M+ PN + Y ++ L ++ N
Sbjct: 506 GLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSN 544
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + + +I C+ G A +M + G PD TY++LI +
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + M+ KG P+ T+ + I LV + + + K++ M GI+PD TY + ++ +
Sbjct: 408 LVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G ++ A+ + M+ + PN Y +I G + A+ K + P+
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527
Query: 362 DTISALLEGLKK----NNQPCKANTIMALVQRRVPH 393
++ + LL L K NN P + +I + + + H
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 15/220 (6%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA------------- 171
Y G+ A TF M GCK +S L++L + I A
Sbjct: 502 YANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKY 561
Query: 172 --FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
L+E K + +I +N + + C + LD+A ++++EMQ + P YT++I+
Sbjct: 562 LHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIA 621
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
+ + MV G P L ++ I L + A ++ G M
Sbjct: 622 CCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNY 681
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+E+ + ++I G + G++ + S M + P+ +Y
Sbjct: 682 EEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 1/264 (0%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F ++ Y + G ++ A + F + +G + ++ A + + ++A + L ++
Sbjct: 255 FYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM 314
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ + + FN +I +C G+++KA + M+K+G++ D+ TY TL + NR
Sbjct: 315 QLR-GVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNR 373
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L ++M KG PN ++ I + +A +L M+ G P VTYN+
Sbjct: 374 MEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNV 433
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I G+ ++G + A++ M + L+P+ Y ++H C G ++A + ++ +
Sbjct: 434 MIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRG 493
Query: 357 WVPSVDTISALLEGLKKNNQPCKA 380
P+V +AL+ GL K + +A
Sbjct: 494 TKPNVVAYTALVSGLAKEGRSEEA 517
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 14/250 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK------VLTESRDLKAIQAFLMEVPEKF 180
K G I+ A DM L G N + ++ ++ ++KA+ EK
Sbjct: 300 KIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVM-------EKM 352
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ DI+++N + C + ++ A ++ M + GV P+ ++YTTLIS K+
Sbjct: 353 GIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEA 412
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M KG P++ T+NV I + +A + M++ G+ PD TY ++ G
Sbjct: 413 RRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHG 472
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C +G +D+A +++ M R PN Y ++ L +EG A+ + D + P
Sbjct: 473 HCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPD 532
Query: 361 VDTISALLEG 370
DT+ ++L G
Sbjct: 533 -DTLYSVLVG 541
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 119/282 (42%), Gaps = 21/282 (7%)
Query: 129 GMIKHAMDTFYDMHLYG------CKRTVKSLNAALKVLTE---------------SRDLK 167
G KHA+ F+DM L R ++L+A + L + L
Sbjct: 70 GAPKHAVAAFHDMLLRAYADSGAAVRAAEALDATVSRLGRLDPRSLTSSLLSLRRAGQLP 129
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
A L + S ++V+ FC+ G +D A+ ++ E+ + GV + Y +L
Sbjct: 130 AAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSL 189
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ ++ + + GL M +G P + T+ + + L + + M+R +
Sbjct: 190 LDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNV 249
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
D Y+ VI +CR G++ A +V+ +G + PN + Y +I+ C+ G A +
Sbjct: 250 AGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEM 309
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ D + + + +++G ++ KA I A++++
Sbjct: 310 LLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEK 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ ++ K G + A F DM G + +V + N + ++ ++ + F E+ EK
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEM-EKK 457
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ DI+++ ++ C G +D A + EM+ G KP+V+ YT L+S K+ R E
Sbjct: 458 GLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEA 517
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
L++ M+ G P+ ++V + L R
Sbjct: 518 FQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L C+ V S NA + + L + + +P ++ D +++N +I+ C G
Sbjct: 113 LASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP----MEPDTYTYNTLIRGLCGRGRT 168
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A V+ +M + G PDV+TYT L+ A K + + L + M KGC P++ T+NV
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ + + R A + + + +G EP+ V+YN+V+KG C + + A+K+ + M +
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN + +I +LC+ G A + K P+ + + +L K K +
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQK---KMDR 345
Query: 383 IMALVQRRVPHFSSNQLSAFKSILS 407
MA V+ V + ++ ++L+
Sbjct: 346 AMAFVELMVSSGCYPDIVSYNTLLT 370
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 4/295 (1%)
Query: 99 IEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
++ +E KSLP G + ++L G A + A +M G V + N
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L ++ L ++P K+ + S+N ++ AFC+ +D+A + M
Sbjct: 298 LISFLCRRGLVEPAMEILDQIP-KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PD+++Y TL++A + + L + + KGC P L ++N I L ++ +A
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEA 416
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M G++PD +TY+ + G CR G ++ A K + + + PN +Y ++
Sbjct: 417 LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LC+ + A + + +P+ T + L+EGL +A +MA + R
Sbjct: 477 LCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSR 531
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G +A+ DM GC V + L+ + K L E+ +K DI +
Sbjct: 166 GRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK-GCAPDIVT 224
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N+V+ C+ G +D A + + G +P+ ++Y ++ R E L M
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN+ TFN+ I L + A +++ + ++G P+ ++YN ++ FC+ +D
Sbjct: 285 RKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMD 344
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A M+ P+ Y T++ LC+ G+ + A + K P + + + ++
Sbjct: 345 RAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 404
Query: 369 EGLKKNNQ 376
+GL K +
Sbjct: 405 DGLTKAGK 412
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 40/295 (13%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMML--YGKAGMIKHAMD 136
N ++ + L A R++ E L+ +GR + M++ + G+++ AM+
Sbjct: 256 NTVSYNIVLKGLCTAERWEDAEKLMAEMSR--KGRPPNVVTFNMLISFLCRRGLVEPAME 313
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ YGC S N L + + + AF+ E+ DI S+N ++ A
Sbjct: 314 ILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV-ELMVSSGCYPDIVSYNTLLTAL 372
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + E L N MV KG P++
Sbjct: 373 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDI 432
Query: 257 ATFNVRIQHLVNKRRSWQANK--------------------LMGLMQRF----------- 285
T++ L + R +A K L+GL +R
Sbjct: 433 ITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTY 492
Query: 286 ----GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
G P+E TY ++I+G G + A+++ + + R ++ + + I L
Sbjct: 493 MVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLL 547
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K G + A D M G + V + NA + L D +A++ F V + F
Sbjct: 290 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD-EAVKVFDTMVCKGF--AP 346
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ +I +C++ ++KA + EM + + P+ +TY+TL+ R + L+
Sbjct: 347 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P+ ++ + + +L RR +A L+ ++ ++PD Y +VI G CR+
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN Y MI+ LCQ+G A + + +K + P+ T
Sbjct: 467 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526
Query: 365 SALLEGLKKNNQPCKA 380
+ + G +NN+ +
Sbjct: 527 NLITRGFLRNNETLRG 542
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 9/300 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N F + L + + HL + K + +G + + ++ G K G A+
Sbjct: 137 NIATFNTLIRGLCVEGKIGEVLHLFD--KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 194
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIK 194
M C+ V + + L + R + QAF + E H I IF++N +I
Sbjct: 195 LLRSMEQGNCQPDVVVYTSIIDSLCKDR--QVTQAFNL-FSEMIHQGISPSIFTYNSLIH 251
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
A C + ++ EM + P+V+ ++T++ A K+ + + + ++M+ +G P
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N+ T+N + + +A K+ M G PD V+Y+ +I G+C+ ++ A ++
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
M + L+PN Y T++H LC G A + + + + +P + LL+ L KN
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 110/213 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I +I++ NI+I +FC + L A+ V+ ++ KLG +P++ T+ TLI + +
Sbjct: 95 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L + A +L+ M++ +PD V Y +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+ + + P+ Y ++IH LC ++ + + +
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+P+V S +++ L K + +A+ ++ ++ +R
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR 307
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 7/246 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + H MD+F G + +LN + + L + L ++ + H Q
Sbjct: 84 YSTVLSLSHQMDSF------GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGH-QP 136
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FN +I+ C G + + + +M G +P+V+TY TLI+ K L
Sbjct: 137 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 196
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C P++ + I L R+ QA L M GI P TYN +I C
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ + M+ ++MPN I+ T++ LC+EG A+ + +K+ P+V T
Sbjct: 257 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 316
Query: 365 SALLEG 370
+AL++G
Sbjct: 317 NALMDG 322
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ I++ C+ LD+A ++ ++ + PD+ YT +I + E L+
Sbjct: 417 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 476
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+ + I L + +A+KL G M+R G P+ TYNL+ +GF R+
Sbjct: 477 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 536
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++ ML R + ++ L +G
Sbjct: 537 NETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A M + P + +T L+ + K L + M G PN+ T N+
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + +R A ++ + + G +P+ T+N +I+G C G + ++ M+G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
PN Y T+I+ LC+ G + A + + + N P V +++++ L K+ Q +A
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 1/191 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A+ F++M G S L L ++R L A L + E ++ DI
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI-EGSNMDPDIQ 454
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ IVI C G L+ A + + G+ P+V TYT +I+ + + L+ M
Sbjct: 455 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG PN T+N+ + + + + +L+ M G D T ++++ G
Sbjct: 515 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 574
Query: 308 DMAKKVYSAML 318
K++ S L
Sbjct: 575 QSVKQILSEFL 585
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ F + + L L + + K + F E+ E
Sbjct: 72 LITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECG 131
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A LV + K G+KP V+++ TL++ + K + G
Sbjct: 132 YPA-SLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEG 190
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L N M G P++ T++V I L + + +A++L M G+ P+ VT+ +I G
Sbjct: 191 FRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDG 250
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G LD+A ++Y +L + L P+ Y T+I+ C++GD + + K P
Sbjct: 251 HCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPD 310
Query: 361 VDTISALLEG 370
T + L++G
Sbjct: 311 KITYTTLIDG 320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 15/280 (5%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA------ALKVLTESRDLK-AI 169
F +M + K G I+ A F + +G K +V S N + +L E LK A+
Sbjct: 138 FFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAM 197
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
A Q D+++++++I C+ +D+A+ + EM + G+ P+ +T+TTLI
Sbjct: 198 HAS--------GAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLID 249
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
K+ + ++ ++ ++ +G P+L T+N I K Q L+ M G++P
Sbjct: 250 GHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKP 309
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D++TY +I G C+ G L+ A + M+ + + +Y +I LC+EG A M
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKML 369
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + P T + ++ KN + ++ +QR
Sbjct: 370 REMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQR 409
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 26/259 (10%)
Query: 132 KHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ-FDIFSF 189
+H + ++ M H + + + ++V+ + + A + E Q DI+ F
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVF 69
Query: 190 NIVIKAFCEMGILDKAY--LVMVEMQKLGVKPDV----------ITYTTLISAFYKDNRP 237
+ +I A+ E G L A + K V D + Y L+ FYK+
Sbjct: 70 SGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKE--- 126
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
++ C G +L FN+ + + A + + ++G++P V++N +
Sbjct: 127 --------ILEC-GYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTL 177
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+ + G LD ++ +AM P+ Y +I+ LC+E + A+ + + ++K
Sbjct: 178 MNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGL 237
Query: 358 VPSVDTISALLEGLKKNNQ 376
VP+ T + L++G KN +
Sbjct: 238 VPNGVTFTTLIDGHCKNGK 256
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 131/270 (48%), Gaps = 7/270 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G ++ A++ + + + L+ L + R K + F E+ E
Sbjct: 78 LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 137
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V +Y TL++ + + + G
Sbjct: 138 YPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEG 196
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + N+L M G+ P+ VT+ +I G
Sbjct: 197 FRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDG 256
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y ML + L P+ Y T+ + LC++GD N A+ + + K P
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPD 316
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRR 390
T + L++G CK + A + R
Sbjct: 317 KFTYTTLIDGC------CKEGDLDAAFEHR 340
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N + + D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M
Sbjct: 145 FNILMHRFCKDGDIRVAQS-VFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAM 203
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
GV+PDV TY+ LI+ K++ + N L++ M+ KG PN TF I R
Sbjct: 204 XASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRV 263
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A ++ M + PD +TYN + G C+ G L+ A + M + L P++ Y T+
Sbjct: 264 DLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTL 323
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
I C+EGD + A+ K +++N +AL+ GL + + A ++
Sbjct: 324 IDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKML 375
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA------LKVLTESRDLKAIQ 170
F +M + K G I+ A F + +G + V S N L L E LK+
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAM 203
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+Q D+++++++I + +D + EM G+ P+ +T+TTLI
Sbjct: 204 X-------ASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDG 256
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K+ R ++ ++ M+ + P+ T+N L K QA+ L+ M G++PD
Sbjct: 257 HCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPD 316
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ TY +I G C+ G LD A + M+ + + Y +I LCQEG A M +
Sbjct: 317 KFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLR 376
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + P T + ++ K K + +QR
Sbjct: 377 EMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQR 415
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + N L + DL + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++ +I C+ G LD A+ M + + D + YT LIS ++ R +
Sbjct: 318 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ K + MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMNG 431
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 8/322 (2%)
Query: 74 RIVIENKY--AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREG---FIMRIMMLYGKA 128
R+ ENKY F+ L + Y + + K + + R F +M + K
Sbjct: 90 RLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKE 149
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIF 187
G I+ A F + +G + +V S N + + DL + F L +Q D++
Sbjct: 150 GEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLD--EGFRLKSAMHASGVQPDVY 207
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++++I C+ +D+A+ + EM G+ P+ +T+TTLI K+ + ++ ++ M
Sbjct: 208 TYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQM 267
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G P+ T+N I L K QA L M G++PD++TY +I G C+ G L
Sbjct: 268 LSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ A + M+ + + Y +I LC+EG A M ++ + P T + +
Sbjct: 328 ETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIV 387
Query: 368 LEGLKKNNQPCKANTIMALVQR 389
+ KN + ++ +QR
Sbjct: 388 MHEFCKNGDVKMGSKLLKEMQR 409
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 41/310 (13%)
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
E + ++ + +A M A+ F D+ L GC V+S N L +R AF
Sbjct: 83 ESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFF 142
Query: 174 MEVPEKF---HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+ I ++ ++NI++++ C G +D+A + +++ GV PD +TY+TL+S
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSG 202
Query: 231 FYKDNR--------PEIGN-GLWNLMVC-----KGCF----------------------P 254
K ++ E+ N G+ VC GCF P
Sbjct: 203 LAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASP 262
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
NLAT+ V + L R +A ++ M + D VTY ++I G CRSG +D A +VY
Sbjct: 263 NLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVY 322
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
S M+ L+ + +Y ++I C+ G A+ DS + + + T + + +GL +
Sbjct: 323 SDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF-WDSTGFSGIRQITTYNIMTKGLLDS 381
Query: 375 NQPCKANTIM 384
+A ++
Sbjct: 382 GMVSEATELL 391
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
F+D + R + + N K L +S + L ++ D +F +I C
Sbjct: 356 FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV---CK---- 250
E G ++A+ ++ + + G + DV +Y+++I+ F KD R N ++ MV CK
Sbjct: 416 ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSH 475
Query: 251 ----------------------------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
GC P + T+N I L + +A+ L M
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEM 535
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
G +PD TY +I+G CR +D+A +++ +L L + ++ +IH LC G
Sbjct: 536 LERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKV 595
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+ A+ + + +KN P++ T + L++G + KA ++ +
Sbjct: 596 DEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI 640
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 148/375 (39%), Gaps = 29/375 (7%)
Query: 8 RRFCHTAAAAAA----DAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLK-----AER 58
+ FC A D+ + IR ++ + L+D + A LK A
Sbjct: 342 KGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKG-LLDSGMVSEATELLKQLENDASC 400
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
P+K+ F H + EN YA R F+ +E + L I
Sbjct: 401 SPDKV--TFGTLIHG--LCENGYA----------NRAFEILEDARNSGEELDVFSYSSMI 446
Query: 119 MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
R + K G A + + +M GCK NA + + +E+
Sbjct: 447 NR----FCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTS 502
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
I ++N +I C+ +A + EM + G KPD+ TY +LI +D + +
Sbjct: 503 NGCCP-TIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ +W+ ++ G ++ N+ I L + + +A + M+ P+ VTYN ++
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
GF G +D A +++A+L L P+ Y T I LC ++ + + +
Sbjct: 622 DGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIM 681
Query: 359 PSVDTISALLEGLKK 373
P+V T S L+ + K
Sbjct: 682 PTVITWSILVRAVIK 696
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D+ NI+I C G +D+A+ + +EM++ P+++TY TL+ FY+ +
Sbjct: 575 LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAA 634
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW ++ G P++ T+N RI+ L + R+ + L+ + GI P +T++++++
Sbjct: 635 SLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694
Query: 302 CRSG 305
+ G
Sbjct: 695 IKYG 698
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I FC + ++ A + +EM G P +ITY TLI K + + + L M+
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 536
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G P++ T+ I+ L ++ A ++ + G++ D + +N++I G C +G +D
Sbjct: 537 ERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVD 596
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +Y M + PN Y T++ + G + A + + P + T + +
Sbjct: 597 EAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRI 656
Query: 369 EGLKKNNQ 376
+GL N+
Sbjct: 657 KGLCSCNR 664
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 146/373 (39%), Gaps = 46/373 (12%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L A D ++ LF ++ R V ++ + +S LA + D +++ L+ +P
Sbjct: 165 LRSLCARGDVDRAVSLF-SSLRRRGVAPDRVTYSTLMSGLA---KHDQLDNALDLLDEMP 220
Query: 111 Q-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDL 166
G + + +L G + GM + AM + + G + + L L +
Sbjct: 221 NYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 280
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
K + H Q D ++ I+I C G +D A V +M K G+ DV Y +
Sbjct: 281 KEAGEVWSRMMANNH-QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS 339
Query: 227 LISAFYKDNRPEIGNGLW--------------NLMVCKG--------------------- 251
LI F + R W N+M KG
Sbjct: 340 LIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMT-KGLLDSGMVSEATELLKQLENDA 398
Query: 252 -CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C P+ TF I L + +A +++ + G E D +Y+ +I FC+ G A
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDA 458
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+VY M+ PN +Y +I+ C+ N A + + P++ T + L++G
Sbjct: 459 NEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDG 518
Query: 371 LKKNNQPCKANTI 383
L K + +A+++
Sbjct: 519 LCKAEKYQEASSL 531
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 1/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + I A+ + +M GC T+ + N + L ++ + + E+ E+ +
Sbjct: 484 FCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLER-GFKP 542
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++ +I+ C +D A + E+ G++ DV+ + LI + + ++
Sbjct: 543 DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIY 602
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M K C PNL T+N + +A L + G++PD VTYN IKG C
Sbjct: 603 LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSC 662
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ + +L +MP + ++ + + G
Sbjct: 663 NRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + N ++ FC + +A ++ +M ++G +PD +T+TTL+ ++ N+ L
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV KGC P+L T+ I L + A L+ M++ IE D V YN +I G C+
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A +++ M + + P+ Y +I LC G ++ A + D ++KN P + +
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 325 ALIDAFVKEGKLVEAEKL 342
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + GC+ + + A + L + R + L+ EK I+ D+ +N +I C+
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCK-RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+D A+ + +M+ G+KPDV TY LIS R + L + M+ K P+L FN
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
I V + + +A KL M + PD V YN +IKGFC+ ++ +V+ M
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
R L+ N Y T+IH Q D + A ++ K + P + T + LL+GL N
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 380 ANTIMALVQRR 390
A + +Q+R
Sbjct: 445 ALVVFEYMQKR 455
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
NA + + L + E+ + H D+ ++N +IK FC+ +++ V EM
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ G+ + +TYTTLI F++ + ++ MV G P++ T+N+ + L N
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A + MQ+ ++ D VTY +I+ C++G ++ ++ ++ + + PN Y TM
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 333 IHYLCQEG 340
+ C++G
Sbjct: 503 MSGFCRKG 510
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Query: 76 VIENKYAFEDTV---SRLAGARRFDYIEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAG 129
++++K+ F D V + + G ++ +E +E + + Q G + +++G +A
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+A F M G + + N L L + +++ + E +K ++ DI ++
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET-ALVVFEYMQKRDMKLDIVTY 464
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I+A C+ G ++ + + + GVKP+V+TYTT++S F + E + L+ M
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN T+N I+ + + +L+ M+ G D T+ LV G LD
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN-MLHDGRLD 582
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + +M K P ++ ++ L+SA K N+ ++ L M G NL T+++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + + A ++G M + G P VT N ++ GFC + A + M+
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
P+ + T++H L Q + A + + + K P + T A++ GL K +P
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ ++ TY+ I+ F + ++ + +
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG 134
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T N + + R +A L+ M G +PD VT+ ++ G +
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M+ + P+ Y +I+ LC+ G+ +LA + K V +
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 366 ALLEGLKK 373
+++GL K
Sbjct: 255 TIIDGLCK 262
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 119/248 (47%), Gaps = 3/248 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
M++G ++G ++ A F +M G + V + N+ L ++ LK ++
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDL-RHA 407
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + ++NI+I +C +G L++A + EM + G PDV TYT L+ + +
Sbjct: 408 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMA 467
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ M+ KG P+ +N RI+ + +A +L +M GI D VTYN++I G
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDG 527
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G+L+ AK + M+ L P+ Y +IH C+ G A KD + PS
Sbjct: 528 LCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPS 587
Query: 361 VDTISALL 368
T + +
Sbjct: 588 AVTYTVFI 595
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A +M GC V + +K + L + F E+ K +Q
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK-GLQP 481
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N I+A +G + KA+ + M G+ D +TY LI K L
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P+ T+ I + +A K M G+ P VTY + I +CR
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A + ML + PN Y +IH LC+ G LAY + +++ VP+ T
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTY 661
Query: 365 SALLEG 370
+ L++G
Sbjct: 662 TLLIDG 667
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 9/201 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ N V++ + D V EM +LG++P ++TY TL+ +F K+ R + L
Sbjct: 201 DVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLL 260
Query: 245 NLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M +G C PN T NV I L K +A +++ M R + TYN +I G
Sbjct: 261 KEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASSFTYNPLITGLL 319
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G + A + M +MP Y MIH L Q G A + + P V
Sbjct: 320 AKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVI 379
Query: 363 TISALLEGLKKNNQPCKANTI 383
T ++LL G CKA ++
Sbjct: 380 TYNSLLNGY------CKAGSL 394
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTES---RDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ F++M +G VK N L+VL+++ D+ A+ A ++++ I+ I ++N
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQL----GIEPSIVTYNT 242
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVK--PDVITYTTLISAFY-KDNRPEIGNGLWNLMV 248
++ +F + G DK +++ EM+ G P+ +T+ +I+ K + E + + +
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRL 302
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
K + T+N I L+ K +A+ L M+ GI P VTYN +I G +SG ++
Sbjct: 303 SKKA--SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVE 360
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ + M L P+ Y ++++ C+ G A ++ D P+V T + L+
Sbjct: 361 AAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILI 420
Query: 369 EG 370
+G
Sbjct: 421 DG 422
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M L G + N + L ++ +L + M++ +Q D ++ +I A CE G
Sbjct: 509 MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN-GLQPDCITYTCLIHAHCERG 567
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+L +A +M G+ P +TYT I A+ + G + M+ +G PN T+N
Sbjct: 568 LLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
V I L R+ A + M G+ P++ TY L+I G C+ G+ + A + Y M
Sbjct: 628 VLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQN 687
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLA 345
+ P+ ++ + EG N A
Sbjct: 688 GIHPDYLTHKALFKGF-DEGHMNHA 711
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 144/333 (43%), Gaps = 43/333 (12%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
++ LF+ NA RI + NK+ + + + A D LLE KS G ++
Sbjct: 39 QEALALFR-NAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS--SGFEGNAVVH 95
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
++ G AG + A++ F M ++D
Sbjct: 96 TTLMKGLCDAGRVVEALEHFRAM---------------------AKDCAP---------- 124
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
D+ ++ ++ A C+ G D+A ++ EM G PD +T++TLI K E
Sbjct: 125 ------DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLV 297
+ ++ +G + A F IQ L NK S + A+K++G++ G P + +NLV
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I GFC++ LD A K+ M+ + +PN + +I LC+ A + + +
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGC 298
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T S ++ GL K Q A + L++RR
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERR 331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 85/161 (52%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ FN+VI FC+ LD AY ++ M + G P+V T+T LI+ K NR L
Sbjct: 232 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 291
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV GC PN+ T++ I L + + A +L LM+R P+ VT+N++I G C++
Sbjct: 292 KMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 351
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
++ A+++Y M P+ Y ++I LC+ + A+
Sbjct: 352 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 37/268 (13%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
TV N + +++DL + L + EK + ++F+F I+I C+ + +A +
Sbjct: 231 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVP-NVFTFTILITGLCKANRVGEAQQL 289
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M G P+V+TY+T+I+ K + + L+ LM + C PN+ T N+ I L
Sbjct: 290 LEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 349
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS------------------------ 304
+R +A +L M+ G PD +TYN +I G C+S
Sbjct: 350 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 409
Query: 305 ------------GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
G + A +++S ++ + P+ Y ++I C+ + ++
Sbjct: 410 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM 469
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKA 380
K + P V+T+SA+L GL + N +A
Sbjct: 470 ASKGFPPRVNTLSAVLGGLFEGNHTERA 497
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS--F 189
+ A+ F M GC N ++ + + A L +V +K +F+ S
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+ ++++ C++G D A ++ +M + G V +Y L+S + R + ++ MV
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P ++T NV I L + + A +L+ M + G PD T N +I G+C+SG D+
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674
Query: 310 AKKVYSAMLGRRLMPNRKIYQTM 332
A+K+ M L PN + +
Sbjct: 675 ARKLLEEMTEAGLEPNDTTHDLL 697
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 9/301 (2%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHA 134
+ N + F ++ L A R + LLE K + G + ++ G K G + A
Sbjct: 264 VPNVFTFTILITGLCKANRVGEAQQLLE--KMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ F M C V + N + L +++ ++ + + E DI ++N +I
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET-GCAPDIITYNSLID 380
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKP-DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ +D+A+ + + + GV + +TY+TL + R +++++V KG
Sbjct: 381 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 440
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+LAT+ I R+ + +L+ M G P T + V+ G H + A ++
Sbjct: 441 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 500
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK---DSMKKNWVPSVDTISALLEG 370
+ +M R + IY ++ + + + A + + D + + PS + AL+E
Sbjct: 501 FDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVES 560
Query: 371 L 371
L
Sbjct: 561 L 561
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 82/208 (39%), Gaps = 13/208 (6%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH------QKSLPQGRR 114
E+ QLF + A R ++ + V +A A + D +LE +K P
Sbjct: 495 ERAIQLFDSMAA-RGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSA 553
Query: 115 EGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFL 173
++ + GK A + M G V S N L L+ R +A Q F
Sbjct: 554 VDALVESLCQVGKT---DDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVF- 609
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E +I + N+VI C +D AY ++ M KLG PD+ T TLI + K
Sbjct: 610 -EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCK 668
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNV 261
R ++ L M G PN T ++
Sbjct: 669 SGRADLARKLLEEMTEAGLEPNDTTHDL 696
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 150 VKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
V +L+A L L E +AIQ F + D +N+V++ DKA V
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLF--DSMAARGCTDDALIYNLVVEGMARASKHDKALAV 535
Query: 209 M---VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ ++ + P L+ + + + + L + M +G ++++N +
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L +R +A ++ M G P+ T N+VI C + +D A ++ M P+
Sbjct: 596 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ T+I C+ G +LA + ++ + P+ DT LLE
Sbjct: 656 IETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN-DTTHDLLE 698
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 7/297 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
F + +L H SLP + I++ L G I+ AM F M G V + N
Sbjct: 397 FTIFKWMLSH-GSLPSTQTYNEIIKCFCLMGD---IQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ + +L L+E+ + ++ D +++ +I F G L+ A + M +
Sbjct: 453 LIYGYCKQGNLNNAMR-LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ P+ +TYT +I ++ + + L+ MV G P+ T+NV I +A
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
G M + G+ P+ +TY I G CR+G +A K++ M R PN Y ++I+
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG 631
Query: 336 LCQEGDFNLA--YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LCQEG A Y + P+VDT + L++GL + +A+ ++ +Q++
Sbjct: 632 LCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ GK M+ A D + M G + ++ + N + +L + ++ + +M ++
Sbjct: 173 LLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAK-LIMSHIFRY 231
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ F++ +I C LD A+ + M K G P+ +TY+TLI+ + R E
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ MV KG P + T+ + + L + S +A +L+G M++ G P+ T+ +I G
Sbjct: 292 MDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG 351
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
R G ++A +Y ML L+P Y +I+ LC EG F A+ + K + +PS
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411
Query: 361 VDTISALLE 369
T + +++
Sbjct: 412 TQTYNEIIK 420
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + + + L L+ L E+ +K I+ ++++ I + + C+ G +
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAGCSSE 325
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ +M+K G P++ T+T LIS +D + EI GL++ M+ G P T+N I
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + R A + M G P TYN +IK FC G + A ++ ML P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQ 376
N Y T+I+ C++G+ N A + + MK N + P T + L+ G + +
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLL-EIMKGNGLKPDAWTYTELISGFSRGGK 497
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + +FN +I C+ G + +A L+M + + P+ TYT+LI +++ ++
Sbjct: 198 IRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAF 257
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++ MV GC PN T++ I L ++ R +A ++ M + GIEP TY + +
Sbjct: 258 AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C +G A ++ M R +PN + + +I L ++G F +A + + VP+
Sbjct: 318 CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTT 377
Query: 362 DTISALLEGL 371
T +AL+ L
Sbjct: 378 VTYNALINQL 387
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 132/284 (46%), Gaps = 12/284 (4%)
Query: 103 LEHQKSLPQGRREGFI-------MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
LEH SL G E I I+ Y + A+ F+ M G + ++ N
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ +++ + + F ++ ++ + ++ ++ I C G A+ + EM+K
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLP-NVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLM---VCKGCFPNLATFNVRIQHLVNKRRS 272
P++ TY++LI ++ R E ++NL+ GC PN+ T+ ++ L + R
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
++A++L+ MQ+ G++P E Y ++ G C++ ++ A ++ +M + Y+ +
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
I LC+E A + + ++K+W + LL+GL K +
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGE 779
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 9/266 (3%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDM-------HLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
++R + KH M F M L+ V+ L +K ++K +
Sbjct: 94 VLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRIL--MIKSCRNEGEVKRVT 151
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
FL E+ K+ + + SF ++ + ++D A + ++M G++P ++T+ T+I+
Sbjct: 152 QFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINI 211
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K R + + + + +PN T+ I A + M + G +P+
Sbjct: 212 LCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPN 271
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
VTY+ +I G C G L+ A + M+ + + P Y + LC G + A +
Sbjct: 272 SVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLG 331
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQ 376
K+ VP++ T +AL+ GL ++ +
Sbjct: 332 KMKKRGCVPNIQTFTALISGLSRDGK 357
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
+ ++TTL+ K + ++ ++ M+ G P+L TFN I L K R +A +M
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ R+ P+ TY +I G CR+ +LD+A ++ M+ PN Y T+I+ LC EG
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPHFSSNQ 398
A M ++ ++K P+V T + L L +A ++ +++R VP+ +
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT-- 344
Query: 399 LSAFKSILSK 408
+A S LS+
Sbjct: 345 FTALISGLSR 354
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ Y + + A F M GC R S + E+R + ++ E
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED- 303
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + ++ ++I A C++G +A + EM + +P+V TYT LI + +D+ +
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA 363
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ N M+ KG P++ T+N I K S A +++ LM+ P+ TYN +I G
Sbjct: 364 KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILG 423
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FCR ++ A + ML R+L PN Y +IH C+EGD AY + + VP
Sbjct: 424 FCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483
Query: 361 VDTISALLEGLKK 373
T S ++ L K
Sbjct: 484 EWTYSVFIDTLCK 496
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 1/242 (0%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
K T++ N L +L+ + +++ +E+ + + +IF+ N ++ +C++G + +A
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDM-VTPNIFTLNTMVNGYCKLGNVVEAE 224
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
L + ++ + G+ D TYT+LI + ++ + N ++ M KGC N ++ I
Sbjct: 225 LYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGF 284
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
RR +A KL M P TY ++I C+ G A ++ M + PN
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNV 344
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
Y +I LC++ +F+ A + ++K +PSV T +AL++G K A I++L
Sbjct: 345 HTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSL 404
Query: 387 VQ 388
++
Sbjct: 405 ME 406
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 7/321 (2%)
Query: 73 NRIVIENKYAFEDTVSRLAGARRFDYIEHL---LEHQKSLPQGRREGFIMRIMMLYGKAG 129
N+ + N+ ++ + + ARR D L + P R I+ + G+
Sbjct: 267 NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRK- 325
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
A++ F +M C+ V + + L E + + L + EK I + ++
Sbjct: 326 --TEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIP-SVVTY 382
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N +I +C+ G+ A ++ M+ P+ TY LI F + L + M+
Sbjct: 383 NALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE 442
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+ PN+ T+N+ I + A KL+ LM G+ PDE TY++ I C+ G ++
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+ ++ ++ + + N IY T+I C+ G + + + VP+ T ++L++
Sbjct: 503 ARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID 562
Query: 370 GLKKNNQPCKANTIMALVQRR 390
G K +A ++ ++ +R
Sbjct: 563 GYCKEKNFKEARLLVDIMIKR 583
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I FC + KA ++ +M + ++P+V+TY LI K+ L +LM
Sbjct: 416 TYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLM 475
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P+ T++V I L + +A L ++ GI+ +EV Y+ +I G+C+ G +
Sbjct: 476 NESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKV 535
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+ + ML +PN Y ++I C+E +F A ++ +K++ P+ DT + L
Sbjct: 536 SDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTIL 595
Query: 368 LEGLKKNNQ 376
++ L K+++
Sbjct: 596 IDNLLKDDE 604
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++++ I C+ G++++A + +++ G+K + + Y+TLI + K + G L
Sbjct: 483 DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL 542
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ GC PN T+N I ++ +A L+ +M + IEP TY ++I +
Sbjct: 543 DKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKD 602
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM-CK 350
D A ++ ML P+ IY IH C G A ++ CK
Sbjct: 603 DEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F + I A+C G L A +++ +M G+ PD + YT I A+ + + G+
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGIL 682
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKR-----------------------RSWQ------A 275
M GC P+ T++ I+HL N + W+
Sbjct: 683 KRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFT 742
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L G M G P+ TY I G C+ G L++A +++ M + PN IY +++
Sbjct: 743 LDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGC 802
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
CQ G + A ++ +P +D+ LL GL KA +
Sbjct: 803 SCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFC 852
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G+ A++ M C ++ N + +++ + L ++ E+ +Q
Sbjct: 389 YCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLER-KLQP 447
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI+I C+ G L AY ++ M + G+ PD TY+ I K E L+
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG N ++ I + L+ M G P+ +TYN +I G+C+
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKE 567
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A+ + M+ R + P Y +I L ++ +F+ A+ M + P V
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627
Query: 365 SALL 368
+A +
Sbjct: 628 TAFI 631
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I +C++G + ++ +M G P+ ITY +LI + K+ + L ++M+
Sbjct: 522 YSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMI 581
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ P T+ + I +L+ QA+ + M G PD Y I +C G L
Sbjct: 582 KRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK 641
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ + M + +MP+ +Y I + G + A+ + K + PS T S L+
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701
Query: 369 EGLKKNNQP 377
+ L N +P
Sbjct: 702 KHL-SNAKP 709
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I +C+ +A L++ M K ++P TYT LI KD+ + + +++ M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G P++ + I + R A L+ M GI PD + Y L I + R G +
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
D A + M P+ Y +I +L
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 7/313 (2%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTF 138
Y + +SRL RR + +L K L G + ++ G G + A
Sbjct: 288 YTYNSFISRLCKERRIEEASGVL--CKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYR 345
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+M G +V + N + L + ++ + + E+ EK ++ D+ ++NI I +C
Sbjct: 346 DEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK-GVEPDVVTYNIQINGYCR 404
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G KA + EM + ++P V TYT+LI F K NR + + +G P++
Sbjct: 405 CGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM 464
Query: 259 FNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
FN I H VN +A +L+ M + PDEVT+N +++G+CR ++ AKK+ M
Sbjct: 465 FNALIDGHCVNGNID-RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEM 523
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
R + P+ Y T+I + GD A + + + + P++ T +AL++G K +
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEA 583
Query: 378 CKANTIMALVQRR 390
A ++ +Q +
Sbjct: 584 DHAEELLREMQSK 596
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F+ E K +I+ I +FNI+I C G KA + M+ GVKP+V+TY T+I+ +
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ E + ++ M K P+ T+N I L +RR +A+ ++ + G+ P+
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
VTYN +I G C G LD A M+ R ++ + Y +IH L E A M K+
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382
Query: 352 SMKKNWVPSVDTISALLEG 370
+K P V T + + G
Sbjct: 383 MREKGVEPDVVTYNIQING 401
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFI 118
D +K F ++ NR ++ + + + + L +R + E +++ + +G +
Sbjct: 337 DLDKAFA-YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE--KGVEPDVV 393
Query: 119 MRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLME 175
+ + Y + G K A+ F +M + TV++ + + V + +R +A + F
Sbjct: 394 TYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKS 453
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ E + DI FN +I C G +D+A+ ++ EM V PD +T+ TL+ + ++
Sbjct: 454 IKEG--MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRER 511
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ E L + M +G P+ ++N I + A ++ M G +P +TYN
Sbjct: 512 KVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYN 571
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+I+G+ + G D A+++ M + + P+ Y +I + D
Sbjct: 572 ALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F++++ A+C+ D+A + M++ + P T +L+S K N+ ++ ++ MV
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
++ TFN+ I L + + +A +G M+ +G++P+ VTYN VI G+C G +
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDTISAL 367
A K++ M + L P+ Y + I LC+E A ++CK ++ VP+ T +AL
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCK-LLESGLVPNAVTYNAL 328
Query: 368 LEG 370
++G
Sbjct: 329 IDG 331
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 4/278 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A F M K + N+ + L + R ++ L ++ E +
Sbjct: 262 YCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP- 320
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I C G LDKA+ EM G+ V TY LI A + + R E +
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P++ T+N++I + +A L M I P TY +I F +
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A++ + + ++P+ ++ +I C G+ + A+ + K+ VP T
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR---VPHFSSNQL 399
+ L++G + + +A ++ ++ R H S N L
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A+ V EM K+ +K ++T+ +I+ ++ + + M G PN+ T+N I
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + A+K+ M+ ++PD TYN I C+ ++ A V +L L+P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
N Y +I C +GD + A+ + M + V SV T + L+ L
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHAL 367
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+L VK ++ + L+SA+ + +P+ NLM P T N + L+ +
Sbjct: 140 NRLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKI 198
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A + M + I+ VT+N++I CR G AK M + PN Y T+
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
I+ C G F A + K KN P T ++ + L K + +A+ ++
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC 311
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + A D F ++ G + V + A + L S L ++ +K I ++
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNV 260
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ AF + G + +A + EM ++ + PD++TY++LI+ +R + N +++L
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC ++ ++N I +R KL M + G+ + VTYN +I+GF ++G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A++ +S M + P+ Y ++ LC G+ A ++ +D K+ + T +
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 367 LLEGLKKNNQ 376
++ G+ K +
Sbjct: 441 VIRGMCKTGK 450
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D+++FNIVI FC + A ++ +M KLG +PD +T +L++ F + NR
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L + MV G P++ +N I L +R A ++R GI P+ VTY +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C S A ++ S M+ +++ PN Y ++ + G A + ++ ++ +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALV 387
P + T S+L+ GL +++ +AN + L+
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I DI +++ +I C +D+A + M G DV++Y TLI+ F
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K R E G L+ M +G N T+N IQ +A + M FGI PD
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKD 351
TYN+++ G C +G L+ A ++ M R + + Y T+I +C+ G A+ + C
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 352 SMKKNWVPSVDTISALLEGL 371
S+ K P + T + ++ GL
Sbjct: 462 SL-KGLKPDIVTYTTMMSGL 480
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 96/186 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I + C+ ++ A+ E+++ G++P+V+TYT L++ +R L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ K PN+ T++ + V + +A +L M R I+PD VTY+ +I G C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A +++ M+ + + + Y T+I+ C+ + ++ ++ V + T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 365 SALLEG 370
+ L++G
Sbjct: 369 NTLIQG 374
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+N +I FC+ ++ + EM + G+ + +TY TLI F++ + +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P++ T+N+ + L + +A + MQ+ ++ D VTY VI+G C++
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ A ++ ++ + L P+ Y TM+ LC +G
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA ++ M F +M G + N ++ ++ D+ Q F ++ + F I
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISP 398
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI+++NI++ C+ G L+KA ++ +MQK + D++TYTT+I K + E W
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---W 455
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+L C +L G++PD VTY ++ G C
Sbjct: 456 SLF----CSLSLK----------------------------GLKPDIVTYTTMMSGLCTK 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G L + +Y+ M LM N +GD L+ + K + + PS+
Sbjct: 484 GLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSL 532
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 61/138 (44%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FP++ FN + +V ++ L M+ GI D T+N+VI FC + +A
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ ML P+R ++++ C+ + A + ++ + P + +A+++ L
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 373 KNNQPCKANTIMALVQRR 390
K + A ++R+
Sbjct: 202 KTKRVNDAFDFFKEIERK 219
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 15/304 (4%)
Query: 99 IEHLLE----------HQKSLPQGRREG--FIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
IEHL++ +++SL G F +M + K G I+ A F + +G
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGL 167
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
+ +V S N + + DL + F L V + +Q D+++ +++I C+ +D A
Sbjct: 168 RPSVVSFNTLMNGYIKIGDLD--EGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDA 225
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ EM G+ P+ +T+TTLI K+ R ++ ++ M+ + P+L T+N I
Sbjct: 226 NELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K Q L+ M G++PD++TY +I G C+ G L+ A + M+ + +
Sbjct: 286 LCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
Y +I LCQEG A M ++ + P + T + ++ K + ++
Sbjct: 346 DXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405
Query: 386 LVQR 389
+QR
Sbjct: 406 EMQR 409
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P+ VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFY 232
DI+ F+ +I A+ E G L A + + K V D + Y L+ FY
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+++ + C G +L FN+ + + + A + + ++G+ P V
Sbjct: 125 EES-----------LEC-GYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVV 172
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
++N ++ G+ + G LD ++ S M + P+ + +I+ LC+E + A + +
Sbjct: 173 SFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEM 232
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ VP+ T + L++G KN +
Sbjct: 233 LBNGLVPNGVTFTTLIDGHCKNGR 256
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 4/290 (1%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
V+ GA + D L+ P ++R L G+ G +A+ DM GC
Sbjct: 141 VAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIR--GLCGR-GRTSNALAVLEDMFRRGC 197
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
V + L+ + K L E+ +K DI ++N+V+ C+ G ++ A
Sbjct: 198 LPDVVTYTILLEATCKRSGYKQAMKLLDEMHDK-GCAPDIVTYNVVLNGICQEGRVEDAM 256
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+ + G +P+ ++Y ++ + R E L M KGC PN+ TFN+ I L
Sbjct: 257 EFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFL 316
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ A +++ M ++G P+ ++YN ++ FC+ + A + M+ R P+
Sbjct: 317 CRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDI 376
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y T++ LC+ G+ ++A + K P + + + +++GL K +
Sbjct: 377 VSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
K AM +MH GC + + N L + + ++ FL +P + + + S+NI
Sbjct: 218 KQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLP-SYGCEPNTVSYNI 276
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
V+K + A +M EM G P+V+T+ LIS + E + M G
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C PN ++N + +++ +A + + LM G PD V+YN ++ CR+G +D+A
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 396
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ + + P Y T+I L + G A + + K P + T S + GL
Sbjct: 397 ELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGL 456
Query: 372 KKNNQ 376
+ ++
Sbjct: 457 CREDR 461
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 114/237 (48%), Gaps = 4/237 (1%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA + + L A + + ++P ++ D +++N +I+ C G A V+ +M
Sbjct: 138 NAMVAGYCGAGQLDAARRLVADMP----VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
+ G PDV+TYT L+ A K + + L + M KGC P++ T+NV + + + R
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVE 253
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
A + + + +G EP+ V+YN+V+KG + + A+K+ M + PN + +I
Sbjct: 254 DAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLI 313
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+LC+ G A + + + P+ + + LL K + KA + L+ R
Sbjct: 314 SFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 4/276 (1%)
Query: 99 IEHLLEHQKSLPQ-GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
+E +E K+LP G + ++L G A + A +M GC V + N
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L ++ L ++P+ + + S+N ++ AFC+ + KA + M
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQ-YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PD+++Y TL++A ++ ++ L + + KGC P L ++N I L ++ +A
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M G++PD +TY+ + G CR ++ A + + + + P +Y ++
Sbjct: 431 LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ + + A + + +P+ T + L+EGL
Sbjct: 491 LCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 5/264 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + L A R++ E L+E K P F M I L + G+++ AM+
Sbjct: 270 NTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT-FNMLISFLC-RRGLVEPAME 327
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
M YGC S N L + + + F+ E+ DI S+N ++ A
Sbjct: 328 VLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV-ELMVSRGCYPDIVSYNTLLTAL 386
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + + L + M KG P++
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ L + R +A + +Q GI P YN ++ G C+ A +++
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEG 340
M+ MPN Y ++ L EG
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEG 530
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I AM+ M GC + S N L L + ++ L ++ +K + S+N
Sbjct: 357 IHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV-LISYN 415
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
VI + G +A ++ EM G++PD+ITY+T+ S +++R E + +
Sbjct: 416 TVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P A +N + L +R + A L M G P+E TY ++++G G + A
Sbjct: 476 GIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535
Query: 311 KKVYSAMLGRRLMPNRKI 328
+++++ + R ++ N+K+
Sbjct: 536 RELFAQLCSRGVV-NKKL 552
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A++ + + GC + S N + LT++ K L E+ K +Q DI +
Sbjct: 390 GEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK-GLQPDIIT 448
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ + C +++A ++Q +G++P Y ++ K L+ M+
Sbjct: 449 YSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMI 508
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
GC PN +T+ + ++ L + +A +L + G+
Sbjct: 509 SSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I+ L R+ A +++ PD + YN ++ G+C +G LD A+++ + M +
Sbjct: 111 IKKLCASGRTADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLVADM---PV 162
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
P+ Y T+I LC G + A + +D ++ +P V T + LLE K +
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRS 215
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 7/265 (2%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L C+ V + NA + + L A + + ++P ++ D +++N +I+ C G
Sbjct: 117 LAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP----MEPDSYTYNTLIRGLCGRGRT 172
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A +V+ +M + G PDV+TYT L+ A K + + L + M KGC P++ T+NV
Sbjct: 173 GNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVV 232
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ + + R A + + + G EP+ V+YN+V+KG C + + A+K+ + M +
Sbjct: 233 VNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY 292
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
PN + +I +LC+ G A + K P+ + + +L K K +
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQK---KMDR 349
Query: 383 IMALVQRRVPHFSSNQLSAFKSILS 407
MA V+ V + ++ ++L+
Sbjct: 350 AMAFVELMVSRGCYPDIVSYNTLLT 374
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 5/264 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N ++ + L A R++ E L+ QK P F M I L + G+++ AM+
Sbjct: 260 NTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT-FNMLISFLC-RRGLVEPAME 317
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
+ YGC S N L + + + AF+ E+ DI S+N ++ A
Sbjct: 318 VLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV-ELMVSRGCYPDIVSYNTLLTAL 376
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C G +D A ++ +++ G P +I+Y T+I K + + L N MV KG P++
Sbjct: 377 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDI 436
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ L + R +A + +Q GI P+ V YN ++ G C+ A ++
Sbjct: 437 ITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIY 496
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEG 340
M+ MPN Y +I L EG
Sbjct: 497 MISNGCMPNESTYTILIEGLTYEG 520
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 16/385 (4%)
Query: 4 LRPNRR--FCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
L PN R F H AA+ +A+ + L R L + ++ L+ P
Sbjct: 36 LTPNSRLNFAHAGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPG 95
Query: 62 KLFQLFKA------NAHNRIVIE----NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ 111
L K A R V+ + A+ V+ + D L+ P
Sbjct: 96 PCAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPD 155
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
++R + G+ G +A+ DM GC V + L+ + K
Sbjct: 156 SYTYNTLIRGLCGRGRTG---NALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK 212
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L E+ K DI ++N+V+ C+ G +D A + + G +P+ ++Y ++
Sbjct: 213 LLDEMRAK-GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
R E L M KG PN+ TFN+ I L + A +++ + ++G P+
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
++YN ++ FC+ +D A M+ R P+ Y T++ LC+ G+ + A +
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Query: 352 SMKKNWVPSVDTISALLEGLKKNNQ 376
K P + + + +++GL K +
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGK 416
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 99 IEHLLEHQKSLP-QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
++ +E KSLP G + ++L G A + A +M G V + N
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ L ++ L ++P K+ + S+N ++ AFC+ +D+A + M
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIP-KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G PD+++Y TL++A + + L + + KGC P L ++N I L ++ +A
Sbjct: 361 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEA 420
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M G++PD +TY+ + G CR ++ A + + + + PN +Y ++
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLG 480
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
LC+ + + A + + +P+ T + L+EGL
Sbjct: 481 LCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 3/246 (1%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
K AM +M GC + + N + + E R AI+ FL +P + + S+N
Sbjct: 208 KQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIE-FLKSLP-SHGCEPNTVSYN 265
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
IV+K C + A +M EM + G P+V+T+ LIS + E + + +
Sbjct: 266 IVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKY 325
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN ++N + +++ +A + LM G PD V+YN ++ CR G +D A
Sbjct: 326 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAA 385
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ + + P Y T+I L + G A + + + K P + T S + G
Sbjct: 386 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSG 445
Query: 371 LKKNNQ 376
L + ++
Sbjct: 446 LCREDR 451
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A++ + + GC + S N + LT++ K L E+ K +Q DI
Sbjct: 378 RGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK-GLQPDI 436
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ + C +++A ++Q +G++P+ + Y ++ K L+
Sbjct: 437 ITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIY 496
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
M+ GC PN +T+ + I+ L + +A +L+G + G+
Sbjct: 497 MISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 2/280 (0%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRT 149
L ++F + L+E K L ++M KA K A+D F + YG +
Sbjct: 132 LGKFKKFSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKD 191
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
++LN + L + D++ + +E K I D SFNI+I +C+ + A +M
Sbjct: 192 REALNVLMDALVKEGDVEDAHSAFLEF--KDCITLDSSSFNILIHGYCKARMFVVARKIM 249
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
EM+K G PDV++Y+ I+A+ + +++ M KGC PN+ T+ + L
Sbjct: 250 EEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKA 309
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R+ +A ++ M+R G PD Y+ +I +SG + A V+ M + + N +Y
Sbjct: 310 RQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVY 369
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
TMI C A + + + P V T + LL+
Sbjct: 370 NTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLK 409
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP-NLATFNVRIQHLVNKR 270
++K G D L+ A K+ E + + + K C + ++FN+ I R
Sbjct: 183 IEKYGASKDREALNVLMDALVKEGDVEDAHSAF--LEFKDCITLDSSSFNILIHGYCKAR 240
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
A K+M M++ G PD V+Y+ I +C + V+ M + PN Y
Sbjct: 241 MFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYT 300
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKN-WVPSVDTISALLEGLKKNNQ 376
T++H L + N A + + MK+N +P S+L+ L ++ +
Sbjct: 301 TVMHALGKARQLNEA-LEVYEKMKRNGCLPDSKFYSSLIYVLSQSGR 346
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQK---SLPQGRREGFIMRIMMLYGKAGMIKHAM 135
N + + L AR+ + + E K LP + F ++ + ++G IK A
Sbjct: 295 NVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSK---FYSSLIYVLSQSGRIKDAW 351
Query: 136 DTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
D F DM G R + N + S+ A++ L+E E + D+ ++ ++K
Sbjct: 352 DVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALK--LLERMEGDSCKPDVKTYAPLLK 409
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C + ++ M K V D+ TYT L++ F ++ + E + V KG P
Sbjct: 410 MCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVP 469
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLM 282
+ TF ++ L K K+ LM
Sbjct: 470 MVKTFKALVEELEQKNMKEMKEKIEKLM 497
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I D ++N++I G+C++ +A+K+ M P+ Y I C++ DF
Sbjct: 222 ITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVE 281
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + +K P+V T + ++ L K Q +A + ++R S S+ +L
Sbjct: 282 AVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVL 341
Query: 407 SKS 409
S+S
Sbjct: 342 SQS 344
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 42/356 (11%)
Query: 90 LAGARRFDYIEHLLEH-QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
L+ R+F + L+E +K+ P+ + +M + A M+K A++ +M YG +
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
L L ++ +K ++ EKF F+ ++ +C G L +A V
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTS--LLYGWCREGKLMEAKEV 258
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV- 267
+V+M++ G++PD++ +T L+S + + L N M +G PN+ + V IQ L
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++R +A ++ M+R+G E D VTY +I GFC+ G +D V M + +MP++
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 328 -----------------------------------IYQTMIHYLCQEGDFNLAYIMCKDS 352
IY +I C+ G+ A + +
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSILS 407
P VDT ++ G +A N +V R + FS+ Q KS+L+
Sbjct: 439 EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI--FSAPQYGTLKSLLN 492
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 53/349 (15%)
Query: 102 LLEHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
L+E ++ L Q + G I++ Y AG + A D DM G + V
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 156 ALKVL--TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
++ L TE R +A++ F+ E++ + DI ++ +I FC+ G++DK Y V+ +M+
Sbjct: 312 LIQALCRTEKRMDEAMRVFVE--MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
K GV P +TY ++ A K + E L M +GC P+L +NV I+
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG---------------------------- 305
+A +L M+ G+ P T+ ++I GF G
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 306 ---------HLDMAKKVYSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
L+MAK V+S + + N + IH L +G A C D M+
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFK 403
+ +P +T + L++GL K TI A + +V +S + +FK
Sbjct: 550 MDLMPQPNTYAKLMKGLNK----LYNRTIAAEITEKVVKMASEREMSFK 594
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR-----TVKSLNAALKVLTESRDLKA 168
R G I+R++ G AG + Y L+ K+ + + + + +L++ R A
Sbjct: 96 RPGLIIRVLSRCGDAGNLG------YRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGA 149
Query: 169 IQAFLMEV----PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+ + E+ PE + F ++++ F ++ KA V+ EM K G++PD +
Sbjct: 150 VWGLIEEMRKTNPELIEPEL----FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
L+ A K+ + + ++ M K PNL F + + + +A +++ M+
Sbjct: 206 GCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G+EPD V + ++ G+ +G + A + + M R PN Y +I LC+
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 48/286 (16%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-- 184
K G IK A D F M + G K + S L + A + L+++ E F++
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIML-------NGYATKGCLVDLTELFNLMLSD 385
Query: 185 ----DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D FN++IKA+ + G+LD+A ++ EM++ GV+PDV+TY+T+I+A + + +
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDA 445
Query: 241 NGLWNLMVCKGCFPNLAT-----------------------------------FNVRIQH 265
+N M+ +G P+++T FN I +
Sbjct: 446 VEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN 505
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L R A + G+ P+ + YN ++ G+C G ++ A +V+ M+ + PN
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+Y T+++ C+ G + + ++ + K PS + +L GL
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + + N + L ++R + +A L ++ +K + D
Sbjct: 228 KEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK-GVLPDN 286
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V +M G+ PDV+T +L+++ K + + +++
Sbjct: 287 WTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDS 346
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG ++ ++ + + K +L LM GI PD +N++IK + + G
Sbjct: 347 MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + + P+ Y T+I LC+ G + A + + PS+ T
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466
Query: 367 LLEGLKKNNQPCKANTIM 384
L++G + KA ++
Sbjct: 467 LIQGFCTHGDLLKAKDLV 484
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 15/266 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K GM+ A F +M G + V + + + L + + EKF+
Sbjct: 401 YAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD-------DAVEKFNQMI 453
Query: 185 D------IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
D I +++ +I+ FC G L KA ++++M G++PD+ + +I+ K R
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ + G PN+ +N + + A ++ +M GI+P+ V Y ++
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C+ G +D ++ +L + + P+ +Y ++H L Q G A + + +
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
T S +L GL KN+ C I+
Sbjct: 634 MDRYTYSIVLGGLFKNS--CSDEAIL 657
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 157 LKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC---EMGILDKAYLVMVEM 212
L+ L E+ R +A+ L +P + D+FS+ IV+K+ C + G D+ +M E
Sbjct: 150 LRGLCEAKRTAEALDILLHRMPHLGCVP-DVFSYCIVLKSLCSDRKSGQADELLRMMAEG 208
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ + P+ + Y T+I F+K+ L+N MV +G P+L+T+N + L R
Sbjct: 209 GAVCL-PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+A ++ M G+ PD TYN +I G+ +G A +V M + ++P+ ++
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327
Query: 333 IHYLCQEG 340
+ LC+ G
Sbjct: 328 MASLCKHG 335
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 7/253 (2%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + + T + K AF +V K + D + +++ CE +A +
Sbjct: 107 TLHTYGILMDCCTRAHRPKLTLAFFGQVL-KTGLGIDTIMISNLLRGLCEAKRTAEALDI 165
Query: 209 MVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG--CFPNLATFNVRIQH 265
++ M LG PDV +Y ++ + D + + L +M G C PN +N I
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ +A L M + GI PD TYN V+ C++ +D A+ + M+ + ++P+
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI-- 383
Y ++I+ G + A + K + +P V T+++L+ L K+ + A +
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345
Query: 384 -MALVQRRVPHFS 395
MA+ ++ FS
Sbjct: 346 SMAMKGQKTDIFS 358
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF-DIFSFNIVIKAFCEMG 200
HL GC V S LK L R L + E + + ++N VI F + G
Sbjct: 172 HL-GCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEG 230
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++KA + EM + G+ PD+ TY +++A K + + MV KG P+ T+N
Sbjct: 231 DVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYN 290
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
I + + +A ++ M GI PD VT N ++ C+ G + A+ V+ +M
Sbjct: 291 SLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N ++ +C +G ++ A V M G++P+V+ Y TL++ + K R + G L+
Sbjct: 530 NVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLF 589
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG P+ +N+ + L R+ A M GI D TY++V+ G ++
Sbjct: 590 REILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKN 649
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A ++ + + + MI + Q A + + VPSV T
Sbjct: 650 SCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTY 709
Query: 365 SALLEGLKKNN 375
S ++ L K
Sbjct: 710 SIMMTNLIKEG 720
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 116/263 (44%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A++ F M G ++ + + ++ DL + ++++ K ++ DI
Sbjct: 438 RIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNK-GMRPDI 496
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN +I C++G + A + +G+ P+V+ Y TL+ + + E ++++
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G PN+ + + R + L + GI+P YN+++ G ++G
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
AK + M + +R Y ++ L + + A ++ K+ N + T++
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
++ G+ + + +A + A + R
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISR 699
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
IQ ++ + ++ +C++G +D+ + E+ G+KP Y ++ ++ R
Sbjct: 562 IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M G + T+++ + L S +A L + ++ D T N++I G
Sbjct: 622 VKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGM 681
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ ++ AK +++++ L+P+ Y M+ L +EG
Sbjct: 682 FQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEG 720
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 62/129 (48%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+NI++ + G A + EM + G+ D TY+ ++ +K++ + L+ +
Sbjct: 604 YNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELH 663
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
++ T N+ I + RR +A L + R G+ P VTY++++ + G ++
Sbjct: 664 AMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVE 723
Query: 309 MAKKVYSAM 317
A ++S+M
Sbjct: 724 EADDMFSSM 732
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+++ DI + NI+I ++ +++A + + + G+ P V+TY+ +++ K+ E
Sbjct: 666 NVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725
Query: 241 NGLWNLMVCKGCF-PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI- 298
+ +++ M GC PN N ++ L+ KR +A + + D T L+I
Sbjct: 726 DDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLID 785
Query: 299 ----KGFCR 303
KG CR
Sbjct: 786 LFSSKGTCR 794
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+LE S E +M + + G I+ A+ M GC T ++N +
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170
Query: 162 E-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ R A+ E+ + F + D ++N + C+ + A VM M + G PD
Sbjct: 171 KLGRVEDALGYIQQEIADGF--EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY +++ K+ + E G+ N MV +GC P++ TFN I L R +A L
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G+ PD T+N++I C+ G +A +++ M P+ Y T+I LC G
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 348
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + KD S T + +++GL K
Sbjct: 349 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 113/270 (41%), Gaps = 36/270 (13%)
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L+G + N L VL E +K +++ E+ + I+ D+ +FN ++KA C +
Sbjct: 47 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQV 105
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN--------------------------- 235
A L++ EM GV PD T+TTL+ F ++
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165
Query: 236 --------RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
R E G + G P+ T+N + L A K+M +M + G
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TYN+V+ C++G L+ AK + + M+ R +P+ + T+I LC A
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ + K P V T + L+ L K P
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDP 315
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ HA+ M G V + N + L ++ L+ + L ++ ++ + DI +FN
Sbjct: 210 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFN 268
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A C L++A + ++ GV PDV T+ LI+A K P + L+ M
Sbjct: 269 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 328
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P+ T+N I +L + + +A L+ M+ G +TYN +I G C+ ++ A
Sbjct: 329 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEA 388
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++V+ M + + N + T+I LC++ + A+ + + + P+ T +++L
Sbjct: 389 EEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTH 448
Query: 371 LKKNNQPCKANTIM 384
K KA I+
Sbjct: 449 YCKQGDIKKAADIL 462
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I C +G L KA ++ +M+ G ITY T+I K R E ++
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G N TFN I L ++ A +L+ M G++P+ +TYN ++ +C+
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + M + Y T+I+ LC+ G +A + + K P+
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512
Query: 365 SALLEGL-KKNN 375
+ +L+ L ++NN
Sbjct: 513 NPVLQSLFRRNN 524
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 6/279 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G A+ F +M GC + N + L L KA+ L++ E
Sbjct: 311 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD--LLKDMESTGCPRS 368
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I C+ +++A V +M G+ + IT+ TLI KD + + L N
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G PN T+N + H + +A ++ M G E D VTY +I G C++G
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+A KV M + + P K Y ++ L + + A + ++ + P T
Sbjct: 489 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 548
Query: 366 ALLEGLKKNNQPCKA--NTIMALVQRR-VPHFSSNQLSA 401
+ GL + P K + ++ +V + +P FSS ++ A
Sbjct: 549 IVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 587
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 6/220 (2%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE---MGILDKAYLVMVEMQKLGVKPDVITY 224
A+ L ++ F IQ D +N ++ E M +L+ Y EM G+KPDV+T+
Sbjct: 36 AVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVY---SEMGARGIKPDVVTF 92
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TL+ A + ++ + M +G P+ TF +Q V + A ++ M
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G +VT N++I G+C+ G ++ A + P++ Y T ++ LCQ
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A + +++ P V T + ++ L KN Q +A I+
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 252
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 2/282 (0%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
RLA AR F + LL S R ++ G A A+ F + + C
Sbjct: 69 RLARARLFPLVPPLLAALHSRGAPLRPTVFAAVIDHLGAASRPDAAVGVFRTVPAF-CSH 127
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+ + ++ L L + A + L P K ++ + S+NI++K C A V
Sbjct: 128 SAATFHSLLNALVSNGRTDAARDMLPLAP-KLGVRLNAVSYNIILKGACLRDGFMGARGV 186
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ EM GV+P V+T+ TL+ + ++ L + M +G PN AT+ + ++ L +
Sbjct: 187 LDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCD 246
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
R A KLM M+ G + D V Y +++ R G D +++ SAM R+L P+
Sbjct: 247 ADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAMRKRKLKPDDAS 306
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y +I LC G + A+ + + VP T L++G
Sbjct: 307 YNILIRCLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDG 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + TV + N + +L A + + E+ + + + ++ ++++ C+
Sbjct: 194 GVRPTVVTFNTLVGSACREGELGAAERLIDEMARR-GVAPNAATYALLMRGLCDADRHAD 252
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A +M +M+ G + DV+ Y L+S+ + + L + M + P+ A++N+ I+
Sbjct: 253 AEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAMRKRKLKPDDASYNILIR 312
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + R+ +A++ + MQ G P TY +++ G CR+ D+ +V++AM+ P
Sbjct: 313 CLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCP 372
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ ++ + L ++G A+ + + ++ D A++ ++ +
Sbjct: 373 QARTFRHLARGLGEDGKAEEAFFVLEQMARREMSLDADGWQAVVTCVRSS 422
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
++P V + +I +RP+ G++ V C + ATF+ + LV+ R+ A
Sbjct: 93 LRPTV--FAAVIDHLGAASRPDAAVGVFR-TVPAFCSHSAATFHSLLNALVSNGRTDAAR 149
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
++ L + G+ + V+YN+++KG C A+ V ML R + P + T++
Sbjct: 150 DMLPLAPKLGVRLNAVSYNIILKGACLRDGFMGARGVLDEMLSRGVRPTVVTFNTLVGSA 209
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
C+EG+ A + + ++ P+ T + L+ GL ++ A +M
Sbjct: 210 CREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLM 257
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+DM GC+ V + + D ++ L + K ++ D S+NI+I+ C+
Sbjct: 258 FDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAM-RKRKLKPDDASYNILIRCLCD 316
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G D+A+ ++EMQ G P TY L+ + ++G ++N M+ G P T
Sbjct: 317 AGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQART 376
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
F + L ++ +A ++ M R + D + V+
Sbjct: 377 FRHLARGLGEDGKAEEAFFVLEQMARREMSLDADGWQAVV 416
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 7/297 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
F + +L H SLP + I++ L G I+ AM F M G V + N
Sbjct: 397 FTIFKWMLSH-GSLPSTQTYNEIIKCFCLMGD---IQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ + +L L+E+ + ++ D +++ +I F G L+ A + M +
Sbjct: 453 LIYGYCKQGNLNNAMR-LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ P+ +TYT +I ++ + + L+ MV G P+ T+NV I +A
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
G M + G+ P+ +TY I G CR+G +A K++ M R PN Y ++I+
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG 631
Query: 336 LCQEGDFNLA--YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LCQEG A Y + P+VDT + L++GL + +A+ ++ +Q++
Sbjct: 632 LCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ GK M+ A D + M G + ++ + N + +L + ++ + +M ++
Sbjct: 173 LLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAK-LIMSHIFRY 231
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ F++ +I C LD A+ + M K G P+ +TY+TLI+ + R E
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ MV KG P + T+ + + L + S +A +L+G M++ G P+ T+ +I G
Sbjct: 292 MDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG 351
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
R G ++A +Y ML L+P Y +I+ LC EG F A+ + K + +PS
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411
Query: 361 VDTISALLE 369
T + +++
Sbjct: 412 TQTYNEIIK 420
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + + + L L+ L E+ +K I+ ++++ I + + C+ G +
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAGCSSE 325
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ +M+K G P++ T+T LIS +D + EI GL++ M+ G P T+N I
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + R A + M G P TYN +IK FC G + A ++ ML P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQ 376
N Y T+I+ C++G+ N A + + MK N + P T + L+ G + +
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLL-EIMKGNGLKPDAWTYTELISGFSRGGK 497
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + +FN +I C+ G + +A L+M + + P+ TYT+LI +++ ++
Sbjct: 198 IRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAF 257
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++ MV GC PN T++ I L ++ R +A ++ M + GIEP TY + +
Sbjct: 258 AMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C +G A ++ M R +PN + + +I L ++G F +A + + VP+
Sbjct: 318 CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTT 377
Query: 362 DTISALLEGL 371
T +AL+ L
Sbjct: 378 VTYNALINQL 387
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 132/284 (46%), Gaps = 12/284 (4%)
Query: 103 LEHQKSLPQGRREGFI-------MRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
LEH SL G E I I+ Y + A+ F+ M G + ++ N
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ +++ + + F ++ ++ + ++ ++ I C G A+ + EM+K
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLP-NVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLM---VCKGCFPNLATFNVRIQHLVNKRRS 272
P++ TY++LI ++ R E ++NL+ GC PN+ T+ ++ L + R
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
++A++L+ MQ+ G++P E Y ++ G C++ ++ A ++ +M + Y+ +
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
I LC+E A + + ++K+W + LL+GL K +
Sbjct: 736 ICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGE 779
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 115/266 (43%), Gaps = 9/266 (3%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDM-------HLYGCKRTVKSLNAALKVLTESRDLKAIQ 170
++R + KH M F M L+ V+ L +K ++K +
Sbjct: 94 VLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRIL--MIKSCRNEGEVKRVT 151
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
FL E+ K+ + + SF ++ + ++D A + ++M G++P ++T+ T+I+
Sbjct: 152 QFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINI 211
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K R + + + + +PN T+ I A + M + G +P+
Sbjct: 212 LCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPN 271
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
VTY+ +I G C G L+ A + M+ + + P Y + LC G + A +
Sbjct: 272 SVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLG 331
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQ 376
K+ VP++ T +AL+ GL ++ +
Sbjct: 332 KMKKRGCVPNIQTFTALISGLSRDGK 357
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
+ ++TTL+ K + ++ ++ M+ G P+L TFN I L K R +A +M
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ R+ P+ TY +I G CR+ +LD+A ++ M+ PN Y T+I+ LC EG
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR--VPHFSSNQ 398
A M ++ ++K P+V T + L L +A ++ +++R VP+ +
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT-- 344
Query: 399 LSAFKSILSK 408
+A S LS+
Sbjct: 345 FTALISGLSR 354
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
V+ L +RF I LL + + I+ + ++G +K AM+ F M GC
Sbjct: 99 VAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGC 158
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
K T + N +K R + L + +++ + ++NI++ A C+ + +A+
Sbjct: 159 KPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAW 218
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V+ +M GV+PDV+TY TL A+ +D + M+ K PN T + +
Sbjct: 219 NVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGY 278
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A +++ M+ GI P+ V +N +IKGF G D K + M + P+
Sbjct: 279 CEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDV 338
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ T+++ G + + D +K P + S L +G + +P KA +++
Sbjct: 339 ITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNF 398
Query: 387 VQR 389
+ +
Sbjct: 399 MSK 401
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 94/182 (51%), Gaps = 14/182 (7%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
+L AL+V+ RDL I ++ FN +IK F ++G D +
Sbjct: 283 NLAEALRVVYRMRDLG--------------IHPNLVIFNSLIKGFLDIGDSDGVDKALTM 328
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M++ GVKPDVIT++T+++ + R + +++ M+ G P++ F++ + V
Sbjct: 329 MEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGE 388
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A L+ M ++G+ P+ V + +I G+C +G ++ A KV+ M + PN K ++T
Sbjct: 389 PVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFET 448
Query: 332 MI 333
+I
Sbjct: 449 LI 450
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 132/279 (47%), Gaps = 5/279 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
IK A + + M G + V + N + + + ++ ++++ K + + +
Sbjct: 214 IKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNK-KVNPNERTCG 272
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I++ +CE G L +A V+ M+ LG+ P+++ + +LI F + + +M
Sbjct: 273 IIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEES 332
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ TF+ + + R + ++ M + GIEPD ++++ KGF R+G A
Sbjct: 333 GVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKA 392
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + + M + PN I+ T+I C G A+ + + + P++ T L+ G
Sbjct: 393 ESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWG 452
Query: 371 LKKNNQPCKANTIMALVQRR--VPHFSSNQL--SAFKSI 405
+ QP +A I+ +++ VP S+ +L A++SI
Sbjct: 453 YGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSI 491
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I+ DI F+I+ K F G KA ++ M K GV+P+V+ +TT+IS + + E
Sbjct: 366 KSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKME 425
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
++ M PNL TF I ++ W+A +++ +M+ + P+ T LV
Sbjct: 426 KAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVS 485
Query: 299 KGFCRSGHLDMAK 311
+ + G ++ AK
Sbjct: 486 EAWRSIGMVNDAK 498
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 36/211 (17%)
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR------------------- 236
E G +A + + + G +P +TYT L++A + R
Sbjct: 67 LVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPD 126
Query: 237 -----------PEIGN-----GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
E GN ++ M GC P +TFN I+ R+ ++ KL+
Sbjct: 127 SILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLE 186
Query: 281 LMQR-FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
LM R ++P+ TYN+++ C+ + A V ML + P+ Y T+ Q+
Sbjct: 187 LMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQD 246
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
G+ N A + D + K P+ T ++ G
Sbjct: 247 GETNKAESIIVDMLNKKVNPNERTCGIIVGG 277
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%)
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V + T L++ + +P+ ++N +V +G P T+ + L ++R + L+
Sbjct: 57 VRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLS 116
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
M+ GI+PD + N +I F SG++ A +++ M P + T+I
Sbjct: 117 EMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLI 169
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 114/212 (53%), Gaps = 1/212 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D +A FL ++ + + D+ +N +I A C+ ++ +AY + EM G+ DV+TY
Sbjct: 179 DTRAAIKFLRKIDGRL-TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTY 237
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TLI F + + GL N MV K PN+ T+N+ + L + + +A ++ +M +
Sbjct: 238 NTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
++PD +TY+ ++ G+ + A+ V++AM + P+ Y +I+ C+ +
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K+ +KN VP + T S+L++GL K+ +
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A F +M + G V + N + LK L E+ K I ++
Sbjct: 211 KYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK-TINPNV 269
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI++ A C+ G + +A V+ M K VKPDVITY+TL+ ++ + ++N
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P++ T+ + I + +A L M + + P VTY+ +I G C+SG
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + M R + Y ++I LC+ G + A + + P++ T +
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 367 LLEGLKKNNQ 376
LL+GL K +
Sbjct: 450 LLDGLCKGGR 459
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 3/250 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++YG G +K A+ +M L V + N + L + +K ++ L V K
Sbjct: 240 LIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKA 298
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ +++ ++ + + + KA V M +GV PDV TYT LI+ F K+ +
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M K P + T++ I L R L+ M+ G D +TY+ +I G
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDG 418
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++GHLD A +++ M + + PN + ++ LC+ G A + +D + K + +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478
Query: 361 VDTISALLEG 370
V T + ++ G
Sbjct: 479 VYTYNVMING 488
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I FC+ ++D+A + EM + + P ++TY++LI K R L
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G ++ T++ I L +A L M+ I P+ T+ +++ G C+
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V+ +L + N Y MI+ C++G A M +P+ T
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 365 SALLEGLKKNNQPCKANTIM 384
++ L K ++ KA ++
Sbjct: 518 ETIIIALFKKDENDKAEKLL 537
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
IQ D+ + NI+I FC MG + + V+ ++ K G PD +T TLI + +
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ ++ +G N ++ I + + A K + + +PD V YN +I
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ + A ++S M + + + Y T+I+ C G A + + + K P+V
Sbjct: 210 CKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNV 269
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQR 389
T + L++ L K + +A +++A++ +
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLK 297
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K M+ A++ F +MH + + ++ + L +S + + + E+ ++
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQ-PA 407
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I C+ G LD+A + +M+ ++P++ T+T L+ K R + ++
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG N+ T+NV I + +A ++ M+ G P+ T+ +I +
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Query: 305 GHLDMAKKVYSAMLGRRLM 323
D A+K+ M+ R L+
Sbjct: 528 DENDKAEKLLRQMIARGLL 546
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I FN ++ +F +M A + ++ G++PD+IT LI+ F + G +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ +G P+ T N I+ L K + +A + G + ++V+Y +I G C+ G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A K + GR P+ +Y T+I +C+ + AY + + K V T +
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYN 238
Query: 366 ALLEGL 371
L+ G
Sbjct: 239 TLIYGF 244
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +I + ++ +F K L + + KG P+L T N+ I + + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ + + G PD VT N +IKG C G + A + +L + N+ Y T+I+ +C+
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 339 EGD 341
GD
Sbjct: 177 IGD 179
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M+C P + FN + + A L ++ GI+PD +T N++I FC
Sbjct: 47 FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + V + +L R P+ T+I LC +G
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M YG K V N LK L + + + L E+ + D
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDN-DCPLDD 365
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI++ FC+ G++ + ++ +M + G PDVITYTT+I+ F K+ + L
Sbjct: 366 VTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKS 425
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN ++ + ++ L + R A LM M G P+ VT+N VI C+ G
Sbjct: 426 MAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL 485
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ ML P+ Y T+I L + G + A + + K P+ S+
Sbjct: 486 VEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545
Query: 367 LLEGLKKNNQ 376
+ L K +
Sbjct: 546 IASALSKEGR 555
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 127 KAGMIKHAMDTFYDMHL-YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
+ G + A+ D+ +GC V S NA LK L ++ +Q LME + +
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQD-LMEEMVRVGCPPN 259
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +FN +I C G+ ++ + V+ +M G PD+ Y T++ K+ E+ + + +
Sbjct: 260 VVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD 319
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PN+ +N ++ L + R QA +L+ M D+VT+N+++ FC++G
Sbjct: 320 RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNG 379
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ ++ ML +P+ Y T+I+ C+EG + A ++ K P+ + +
Sbjct: 380 LVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYT 439
Query: 366 ALLEGLKKNNQPCKANTIMA 385
+L+GL + A +M+
Sbjct: 440 IVLKGLCSAERWVDAEDLMS 459
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ VI FC+ G++D+A +++ M G +P+ I+YT ++ R L
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +GC PN TFN I L K QA +L+ M G PD ++Y+ VI G ++
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G D A ++ + M+ + + PN IY ++ L +EG N
Sbjct: 519 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRIN 557
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+ D+H GC V + N L V + + L ++P F D+ S+N
Sbjct: 170 RSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYN 229
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
V+K C + +M EM ++G P+V+T+ TLI ++ E + + MV
Sbjct: 230 AVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC P++ + + + + A++++ M +G++P+ V YN V+KG C + + A
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+++ + M + + ++ + CQ G + + ++ VP V T + ++ G
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409
Query: 371 LKKNN 375
K
Sbjct: 410 FCKEG 414
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 9/249 (3%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVK 151
R + +E +LEH G I ++ G K G+I A+ M GC+
Sbjct: 383 RVIELLEQMLEH------GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
S LK L + + + ++ E+ + +FN VI C+ G++++A ++ +
Sbjct: 437 SYTIVLKGLCSAERWVDAEDLMSQMIEQ-GCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G PD+I+Y+T+I K + + L N+MV KG PN ++ L + R
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ ++ +Q I D V YN VI C+ G D A + + M+ MPN Y
Sbjct: 556 INRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTI 615
Query: 332 MIHYLCQEG 340
+I L EG
Sbjct: 616 LIRGLASEG 624
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 120/297 (40%), Gaps = 1/297 (0%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTF 138
N + + L A R++ E LL + ++ + + G++ ++
Sbjct: 329 NVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELL 388
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
M +GC V + + + L L++ + + S+ IV+K C
Sbjct: 389 EQMLEHGCVPDVITYTTVINGFCK-EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCS 447
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
A +M +M + G P+ +T+ T+I+ K E L M+ GC P+L +
Sbjct: 448 AERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLIS 507
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
++ I L ++ +A +L+ +M G+ P+ + Y+ + + G ++ +++ +
Sbjct: 508 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQ 567
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+ + +Y +I LC+ G + A + +P+ T + L+ GL
Sbjct: 568 DVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEG 624
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 40/225 (17%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA---------FYKDNRP 237
+++ V++A C G + A V+ EM++ G P Y ++ A F R
Sbjct: 116 YTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRV 175
Query: 238 -----------EIGNG--------------------LWNLMVCKGCFPNLATFNVRIQHL 266
++GN L +L GC P++ ++N ++ L
Sbjct: 176 LQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGL 235
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+R + LM M R G P+ VT+N +I CR+G + +V + M+ P+
Sbjct: 236 CMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDI 295
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++Y T++ +C+EG +A+ + P+V + +L+GL
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGL 340
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 106/205 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+FNI+I C+ G L +A ++ M+ +G PDV+TY +LI + K E L
Sbjct: 193 NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV 252
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC P++ T+N + R +A M+R G+ + VT++ + FC++
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A K+++ M + + PN Y ++ C+ G + A ++ + +++ +V T
Sbjct: 313 GMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ L++GL K + +A + L++R
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMER 397
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N + L + DL +A L + + D+ ++N +I + + G L++ ++
Sbjct: 194 VFTFNIMIDFLCKEGDLAEARALLARM-KAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV 252
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
EM+ G +PDV+TY L++ F K R E + M +G N+ TF+ +
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A KL M+ G++P+EVTY ++ G C++G LD A + + M+ + + N Y
Sbjct: 313 GMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Query: 330 QTMIHYLCQEG 340
++ LC+EG
Sbjct: 373 TVLVDGLCKEG 383
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 117 FIMRIMMLY-GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
F IM+ + K G + A M GC V + N+ + + +L+ ++ + E
Sbjct: 195 FTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGE 254
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + D+ ++N ++ FC+ G +++AY EM++ GV +V+T++T + AF K+
Sbjct: 255 M-RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNG 313
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
L+ M KG PN T+ + R A L M + G+ + VTY
Sbjct: 314 MVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYT 373
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+++ G C+ G + A+ V+ M + N +Y T+IH
Sbjct: 374 VLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIH 412
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YGK G ++ +M GC+ V + NA + + ++ ++ E+ ++ +
Sbjct: 239 YGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM-KREGVMA 297
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F+ + AFC+ G++ +A + +M+ G+KP+ +TYT L+ K R + L
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK----- 299
N MV +G N+ T+ V + L + + +A + LM+R GI +E+ Y +I
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVY 417
Query: 300 ------------------------------GFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
G C LD AK + + M L PN IY
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + + A + + M + P++ T AL++GL CKA +I
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGL------CKAGSI----DE 527
Query: 390 RVPHFS 395
+ HF+
Sbjct: 528 AISHFN 533
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+ ++ + G+LD A L + +++L V P+ T ++ ++ E+ L+ +
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA 191
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
PN+ TFN+ I L + +A L+ M+ G PD VTYN +I G+ + G L+
Sbjct: 192 ----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+K+ M G P+ Y +++ C+ G AY + ++ + +V T S ++
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQLS 400
KN +A + A Q R+ N+++
Sbjct: 308 AFCKNGMVREAMKLFA--QMRMKGMKPNEVT 336
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 113 RREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
+REG + ++ + K GM++ AM F M + G K + + ++ L
Sbjct: 291 KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRL 350
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
E+ ++ + ++ ++ +++ C+ G + +A V M++ G++ + + YTT
Sbjct: 351 DDALVLTNEMVQQ-GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409
Query: 227 LISAFY---------------KDNRPEIGNGLWNLMV---CK-----------------G 251
LI + KD E+ L+ ++ C G
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN + + R+ +A L+ M G P+ VTY ++ G C++G +D A
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG- 370
++ M+ L PN + Y ++ LC+ G + A ++ + + K ++L++G
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGH 589
Query: 371 LKKNN 375
LK+ N
Sbjct: 590 LKQGN 594
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+ L E+ +K ++ D+ + +I C + LD+A ++ +M + G+KP+ + YT ++ A
Sbjct: 425 SLLSEMKDK-GMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA 483
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+K + L M+ G PN+ T+ + L +A M G+EP+
Sbjct: 484 CFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPN 543
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
Y ++ G C++G LD A + M+ + + + + +++ ++G+ A+ +
Sbjct: 544 VQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFAL 601
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ ++ ++ ++ C+ G LDKA L++ EM G+ D + T+L+ K +
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M+ G +L + + N +A +++ M GI PD V YN +I
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659
Query: 302 CRSGHLDMAKKVYSAM 317
+ G+++ A + + M
Sbjct: 660 QKLGNMEEAAILQNEM 675
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 56/135 (41%)
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+A ++ +M G +P+++TY L+ K + +N MV G PN+ + +
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R +A L+ M G+ D V ++ G + G+L A + + M+ L
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQ 611
Query: 324 PNRKIYQTMIHYLCQ 338
+ Y + C
Sbjct: 612 LDLYGYTCFVWGFCN 626
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+ DV TY+ LI+ K ++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I RR A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 3/253 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNR 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALL 368
P + T + ++
Sbjct: 376 GLKPEIGTYTMII 388
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ + M + + N + L + DLK Q + E+ K ++ D ++ +I
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLI 318
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C+ G L+ A+ M K ++ D + YT LIS ++ R + M+ G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
P + T+ + I K W KL+ MQR G P VT
Sbjct: 379 PEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 51/310 (16%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
+ Q LP +M + YGK IK A D F M + G V S N L
Sbjct: 315 MRRQSILPDVVTFNMLMGSLCKYGK---IKEARDVFDTMAMKGQNPDVFSYNIML----- 366
Query: 163 SRDLKAIQAFLMEVPEKFHIQFD------IFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
+ A + L+++ + F + I +FN++IKA+ G+LDKA ++ EM+ G
Sbjct: 367 --NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP---------------------- 254
VKP+V+TYTT+I+A + + + +N M+ +G P
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 255 -------------NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ F+ I +L R A + L G+ P V Y++++ G+
Sbjct: 485 ELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G ++ A +V+ AM+ + PN +Y T+++ C+ G + + ++ ++K PS
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 604
Query: 362 DTISALLEGL 371
+ +++GL
Sbjct: 605 ILYNIIIDGL 614
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D F +M G + ++ + L ++R + +AFL ++ K + +
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK-GVLPNN 289
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++N +I + G +A V EM++ + PDV+T+ L+ + K + + +++
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDT 349
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ ++N+ + K L LM GI P T+N++IK + G
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGM 409
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A +++ M + PN Y T+I LC+ G + A + + P
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L++G + KA +++ + H + F SI++
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHL---DIVLFSSIIN 507
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 3/251 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQ 183
Y GM+ AM F +M +G K V + + L + A++ F + + +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG--VA 461
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++++ +I+ FC G L KA ++ E+ G+ D++ ++++I+ K R +
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI 521
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++L V G P +++ + + +A ++ M GIEP++V Y ++ G+C+
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +D ++ ML + + P+ +Y +I L + G A + + + + T
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641
Query: 364 ISALLEGLKKN 374
S +L GL KN
Sbjct: 642 YSIVLRGLFKN 652
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +FN+++ + C+ G + +A V M G PDV +Y +++ + L+
Sbjct: 323 DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM+ G P + TFNV I+ N +A + M+ G++P+ +TY VI CR
Sbjct: 383 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRI 442
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A + ++ M+ + + P++ Y +I C G A + + M +
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLF 502
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
S+++ L K + A I L
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLT 525
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 154 NAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N LK E+ R +A+ L PE + D+FS++I++K+ C+ G +A ++ M
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVP-DVFSYSILLKSLCDQGKSGQADDLLRMM 208
Query: 213 QKLGV--KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+ G PDV+ Y T+I F+K+ L+ MV +G P+ T++ + L R
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+A + M G+ P+ TYN +I G+ +G A +V+ M + ++P+ +
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ LC+ G A + K P V + + +L G
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ DI N ++K FCE D+A +++ +LG PDV +Y+ L+ + +
Sbjct: 142 LRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQA 201
Query: 241 NGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+ L +M G C P++ +N I + +A L M + GI PD VTY+ V+
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ +D A+ M+ + ++PN Y +I+ G + A + K+ +++ +
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 321
Query: 359 PSVDTISALLEGLKK 373
P V T + L+ L K
Sbjct: 322 PDVVTFNMLMGSLCK 336
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHI-QFDIFSFNIVIKAFCEMGILD 203
GC V S + LK L + L + E + D+ ++N VI F + G ++
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVN 236
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
KA + EM + G+ PD +TY++++ A K + MV KG PN T+N I
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + +A ++ M+R I PD VT+N+++ C+ G + A+ V+ M +
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 324 PNRKIYQTMIHYLCQEG 340
P+ Y M++ +G
Sbjct: 357 PDVFSYNIMLNGYATKG 373
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++ +C++G +D+ + EM + G+KP I Y +I ++ R ++ M
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G N T+++ ++ L R +A L ++ ++ D +T N +I G ++ ++
Sbjct: 632 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AK +++++ L+P Y MI L +EG A M P ++ ++
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
L K N+ +A ++ + R +FS L+
Sbjct: 752 RELLKKNEIVRAGAYLSKIDER--NFSLEHLTT 782
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+++++ +C +G ++KA V M G++P+ + Y TL++ + K R + G L+ M+
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P+ +N+ I L R+ A M GI ++ TY++V++G ++ D
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ + + + TMI + Q A + + VP V T S ++
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQ 398
L K LV+ FSS Q
Sbjct: 717 TNLIKE----------GLVEEAEDMFSSMQ 736
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G I + F +M G K + N + L E+ + E+ E I
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAM 637
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++IV++ + D+A + E++ + VK D+IT T+I+ ++ R E L+
Sbjct: 638 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ G P + T+++ I +L+ + +A + MQ G EPD N V++
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 752
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK ++F A I N + V+ R D E L ++ L +G + I+
Sbjct: 551 EKALRVFDAMVSAGIE-PNDVVYGTLVNGYCKIGRID--EGLSLFREMLQKGIKPSTILY 607
Query: 121 IMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE 178
+++ G +AG A F++M G + + L+ L ++R FL +
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE-AIFLFKELR 666
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+++ DI + N +I + +++A + + + G+ P V+TY+ +I+ K+ E
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M GC P+ N ++ L+ K +A + + + +T L++
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Query: 299 -----KGFCR 303
KG CR
Sbjct: 787 DLFSSKGTCR 796
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + +I + G L A + M+K G K D Y LI F + R + L+
Sbjct: 346 DAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLF 405
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P++ T+N + L ++L+G M G +P VT+ ++ G+C++
Sbjct: 406 EEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKA 465
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS-VDT 363
G D A K++ +M R+ PN IY T+I +LC+ + ++A I D M++N VP+ V T
Sbjct: 466 GKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVA-IKLFDEMRENNVPANVTT 524
Query: 364 ISALLEGLKKNNQPCKANTIM 384
+ALL+GL+ N P KA +M
Sbjct: 525 YNALLKGLQDKNMPEKAFELM 545
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 3/237 (1%)
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
++GC + N D+ + ++E EK + ++ + N ++ C +G
Sbjct: 232 QVHGCAPNTVTYNCLADACCRVGDID-MACQIVERMEKEGVTPNVITMNTIVGGLCRVGR 290
Query: 202 LDKAYLVMVEMQK--LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+ A E + L + + +TY+TL+SAF N + L++ M +G P+ +
Sbjct: 291 VGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMY 350
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
I L R A + M++ G + D YN++I GFCR L A +++ M G
Sbjct: 351 FTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKG 410
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L P+ Y T++ LC+ GDF+ + + + PSV T L+ G K +
Sbjct: 411 AGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGK 467
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 12/232 (5%)
Query: 124 LYGKAGMIKHAMD--TFYDMHLYGCKRTVKSLNAAL--KVLTESRDLKAIQAFLMEVPEK 179
LYG G HA + +H + + +A+L K+L +FL +
Sbjct: 65 LYGLIGEPSHAFTPASLATLHSLAARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAA 124
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
D+ +FN ++ A G L + M++ VKPD++TY L++ K +
Sbjct: 125 GAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGL--V 182
Query: 240 GNGLWNL--MVCKGC--FPNLATFNVRIQHLVNKRRSWQANKLMG--LMQRFGIEPDEVT 293
G+ L L M G ++ N + L R A + + Q G P+ VT
Sbjct: 183 GDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVT 242
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
YN + CR G +DMA ++ M + PN T++ LC+ G A
Sbjct: 243 YNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA 294
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A F +M G + V + N L L ++ D A+ L + + Q + +F
Sbjct: 398 LHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDD-GCQPSVVTFG 456
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ +C+ G D+A + M + ++P+ + Y TLI K ++ L++ M
Sbjct: 457 TLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREN 516
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
N+ T+N ++ L +K +A +LM M+ PD VT +++++
Sbjct: 517 NVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLME 565
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 3/233 (1%)
Query: 111 QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
QG +M M+ G +AG + A + M G K K+ N + + L
Sbjct: 341 QGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHE 400
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
E+ + +Q D++++N ++ C+ G ++ M G +P V+T+ TL+
Sbjct: 401 AHQLFEEM-KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLV 459
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ K + + ++ M PN +N I L R A KL M+ +
Sbjct: 460 HGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVP 519
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ TYN ++KG + A ++ M R P+ ++ +L + G+
Sbjct: 520 ANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGE 572
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 1/205 (0%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K++ F E+ E + ++ FNI++ FC+ G + A V E+ K G++P V+++
Sbjct: 117 FKSVWGFYKEILECGYPA-SLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFN 175
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
TL++ + + + G L + M G P++ T++V I L + + AN+L M
Sbjct: 176 TLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGN 235
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+ P+ VT+ +I G C++G +D+A + Y ML + P+ Y T+I+ LC+EGD A
Sbjct: 236 GLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQA 295
Query: 346 YIMCKDSMKKNWVPSVDTISALLEG 370
+ + K P T + L++G
Sbjct: 296 QDLIDEMSMKGLKPDKITYTTLIDG 320
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G ++ A F ++ +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
IQ D+++++++I C+ ++ A + EM G+ P+ +T+TTLI K
Sbjct: 196 AMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
++ + M+ +G P+L T+N I L + QA L+ M G++PD++TY
Sbjct: 256 SIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A K M+ + + Y +I LC+EG A M ++ +
Sbjct: 316 TLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 376 GLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQR 409
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F +I C+ G +D A EM + G PD+ITY TLI K+ + L + M
Sbjct: 243 TFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEM 302
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+ T+ I + A K M + I D+V Y +I G CR G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQS 362
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
A+K+ ML L P+ Y +I+ C++GD + + K+ + VP V T
Sbjct: 363 VGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G I AM+ + +M G + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ + +
Sbjct: 312 ITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P+ T+ + I K +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ +I A C++G +D A + +M GV PD++ +++L+ ++ E L+
Sbjct: 412 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELF 471
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G PN+ FN + +L + R + +L+ ++ G+ PD ++YN +I G C +
Sbjct: 472 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLA 531
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K+ M+ L P+ Y T++H C+ G + AY + + P V T
Sbjct: 532 GTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTY 591
Query: 365 SALLEGL 371
+ +L GL
Sbjct: 592 NTILHGL 598
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 131 IKHAMDTFYD-MHLYGCKRTVKSLNAALKVL-TESRDLKAIQAFLMEVPEK-FHIQFDIF 187
+ AMD M GC S N LK L E R +A++ M ++ + ++
Sbjct: 145 VGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV 204
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S++ VI F G +DK Y + +EM G+ PDV+TYTT+I K + ++ M
Sbjct: 205 SYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQM 264
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ G PN+ T+N I ++ + + +++ M G +P+ TY ++ C++G
Sbjct: 265 IDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRC 324
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
A+ + +M+G+ + P+ Y M+H +G
Sbjct: 325 REARFFFDSMIGKGIKPSVTTYGIMLHGYATKG 357
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L++ E ++ D+ S+N +I C G +D+A ++ M +G+KPD +Y TL+ +
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K R + + M+ G P + T+N + L +R +A +L M G + D
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG----DFNLAYIM 348
TYN+++ G C+S +D A K++ + + L N + MI L + G +L +
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684
Query: 349 CKDSMKKNWVP------------SVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSS 396
+ + +N V S++ +L ++KN + + ALV+R +
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744
Query: 397 NQLSAFKSILSK 408
++ A+ S L +
Sbjct: 745 SRAGAYLSKLDE 756
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGLWNL 246
+++I+I FC MG L+ + + K G + D I L++ R E + L
Sbjct: 96 TYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQR 155
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM---QRFGIEPDEVTYNLVIKGFCR 303
M GC P+ ++N+ ++ L N++R+ +A +L+ +M Q + P+ V+Y+ VI GF
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G +D ++ M+ R + P+ Y T+I LC+ F+ A + + + P++DT
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDT 275
Query: 364 ISALLEG 370
+ L+ G
Sbjct: 276 YNCLIHG 282
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + + F +M G V + + L +++ +A ++ + ++ +I +
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN-GVKPNIDT 275
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I + +G + ++ EM G KP+ TY +L++ K+ R ++ M+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P++ T+ + + K + + L+ LM GI P+ +N+ + + G +D
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIID 395
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M + L P+ Y +I LC+ G + A + + + P + S+L+
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV 455
Query: 369 EGL 371
GL
Sbjct: 456 YGL 458
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 5/250 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ + G ++H F + G + +N L L + + + +A+ L +PE
Sbjct: 104 FCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPE-LGCM 162
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D S+NI++K C ++A + M + Q P+V++Y+T+I+ F+ + + +
Sbjct: 163 PDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKP 222
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M+ +G P++ T+ I L + +A + M G++P+ TYN +I G
Sbjct: 223 YNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHG 282
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ G ++ M PN Y ++++YLC+ G A + K PS
Sbjct: 283 YLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPS 342
Query: 361 VDTISALLEG 370
V T +L G
Sbjct: 343 VTTYGIMLHG 352
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D N ++ C+ + +A V+++ M +LG PD ++Y L+ + R E
Sbjct: 126 RMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEAL 185
Query: 242 GLWNLMV---CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L ++M C PN+ +++ I + + + L M GI PD VTY VI
Sbjct: 186 ELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVI 245
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C++ D A+ V+ M+ + PN Y +IH G + M ++
Sbjct: 246 DGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPK 305
Query: 359 PSVDTISALLEGLKKNNQ 376
P+ T +LL L KN +
Sbjct: 306 PNCCTYGSLLNYLCKNGR 323
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E ++ D FS+N ++ +C+ G +D AY +M G+ P V+TY T++ +
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599
Query: 233 KDNRPE---------IGNGL-WNL-------------------------MVCKGCFPNLA 257
+ R I +G W++ + KG N+
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
TFN+ I L+ R A L + G+ + VTY LV++ G L+ ++SAM
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
PN ++ ++ L GD + A ++N+ T S L+
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 131/357 (36%), Gaps = 53/357 (14%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
AL+K + D LF AN + V+ + E+ + FD + +E +
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEE-GSLEEFDSLFSAMEKNGTA 725
Query: 110 PQGRREGFIMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
P + ++R ++ G +AG +D +R + +L
Sbjct: 726 PNSQMLNALVRRLLHRGDISRAGAYLSKLD----------ERNFSVEASTTSMLISIFSS 775
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
Q +P+K+ I + S ++ KA +D AY + EM G+ PDV+TY T
Sbjct: 776 DEYQHHAKSLPKKYRILNEANSSALIKKA----RRIDDAYSLFREMLMKGLTPDVVTYNT 831
Query: 227 LISAFYKDNRPE-----------------------IGNGL------------WNLMVCKG 251
++ ++ R I NGL + + KG
Sbjct: 832 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 891
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
N+ TFN+ I L+ R A L + G+ PD VTY LV + G L+
Sbjct: 892 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFD 951
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ M + ++ ++ L Q GD + A +KN+ T S L+
Sbjct: 952 GLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 35/152 (23%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FNI A+ + GI+DKA + +M++ G+ PD ++Y LI A K R +
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVD---------- 430
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
V+ ++N+ G+ PD V ++ ++ G C +
Sbjct: 431 ---------DAEVKFNQMINE----------------GVTPDIVVFSSLVYGLCTVDKWE 465
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
++++ ML + PN + T++ LC+EG
Sbjct: 466 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 12/253 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AMD F + G + V + ++ L E L+ + L EK +
Sbjct: 670 KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS-LFSAMEKNGTAPNS 728
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
N +++ G + +A + ++ + + T + LIS F D L
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPK- 787
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
K N A + I+ RR A L M G+ PD VTYN ++ G ++G
Sbjct: 788 ---KYRILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 841
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM----CKDSMKKNWVPSVD 362
AK++Y +M+ R N Y +++ LC+ + A+ M C ++ N +
Sbjct: 842 FSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNI 901
Query: 363 TISALLEGLKKNN 375
I ALL+G +K +
Sbjct: 902 MIGALLKGGRKED 914
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 120/300 (40%), Gaps = 31/300 (10%)
Query: 106 QKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+K L G G + +L+G + A + + +M G K + + N L L +S
Sbjct: 577 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKS 636
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ + K +Q +I +FNI+I A + G + A + + G+ +V+T
Sbjct: 637 NCVDEAIKMFQNLCSK-GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVT 695
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y ++ ++ E + L++ M G PN N ++ L+++ +A + +
Sbjct: 696 YRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 755
Query: 284 RFGIEPDEVTYNLVIKGFC----------------------------RSGHLDMAKKVYS 315
+ T +++I F ++ +D A ++
Sbjct: 756 ERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFR 815
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
ML + L P+ Y T++H L Q G F+ A + + ++ T + +L GL K+N
Sbjct: 816 EMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSN 875
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 3/271 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAGMIK TF + G +V + N L L +S + E+ + +
Sbjct: 192 YVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG-RVGVIP 250
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++FNI+ FC+ G +DK + +M++ G +PD++TY TLI+ + R L+
Sbjct: 251 NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLY 310
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + P+L ++ + L + R +A++L+ M G+ PD V+YN +I G+C+
Sbjct: 311 RIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKE 370
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +K + M+G + P+ + +I +EG A + + K S D
Sbjct: 371 GKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIY 430
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPH 393
L+ L + ++P A T++ + +R +PH
Sbjct: 431 DYLVASLCEEDRPFAAKTLLERMSQRGYIPH 461
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 11/241 (4%)
Query: 151 KSLNAALKVLTE------SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
K A+K LTE D Q + + +D F++++KA+ + G++ +
Sbjct: 144 KEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQD---CNWDPIIFDLLLKAYVKAGMIKE 200
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
+ +++ ++G P VI L++ K N + ++ M G PN TFN+ +
Sbjct: 201 GFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNI-LT 259
Query: 265 HLVNKRRSW-QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
HL K + N + M+ G EPD VTYN +I G+C G L A +Y M R ++
Sbjct: 260 HLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVL 319
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ Y +++ LC+EG A+ + + + P V + + L+ G K + ++ ++
Sbjct: 320 PDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSL 379
Query: 384 M 384
+
Sbjct: 380 L 380
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK--PDVITYTTLISAFYKDNRPEIGNG 242
D F+ ++I+ + + G L A ++VE++K GV PD+ Y L+++ +++RP
Sbjct: 391 DSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDY--LVASLCEEDRPFAAKT 448
Query: 243 LWNLM------------------VCKG-CF----------------PNLATFNVRIQHLV 267
L M +CKG C PNL T+ I+ L
Sbjct: 449 LLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLC 508
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
RS +A KLM M FG++PD +I G+CR A+ + + + +
Sbjct: 509 RMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSE 568
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
Y T++ +C++GD + + +K + P+ T +++GL+KN
Sbjct: 569 SYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKN 615
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 35/259 (13%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ ++ C+ G + +A+ ++ M G+ PDV++Y TLI + K+ + L
Sbjct: 321 DLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLL 380
Query: 245 NLMVCKGCFPNLATFNVRIQ-----------------------------------HLVNK 269
M+ G FP+ T V IQ L +
Sbjct: 381 YEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEE 440
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R + A L+ M + G P YN +I+ C+ + A + + ++ + PN Y
Sbjct: 441 DRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTY 500
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ +I LC+ G A + ++ + P + A++ G + KA +++ L +
Sbjct: 501 KALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAK 560
Query: 390 RVPHFSSNQLSAFKSILSK 408
F S S I+ +
Sbjct: 561 EFQIFDSESYSTLVRIVCE 579
>gi|356555104|ref|XP_003545878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Glycine max]
Length = 395
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRR--EGFIMRIMMLYGKA-GMIKHAMDTFYDMH- 142
+S+LA A + + I L HQ +L + RR + F ++ Y + + A+ T +DM+
Sbjct: 91 ISKLAQAHQLNPI--LTLHQ-TLTKRRRFSDDFFYTLIKAYAHSFQRVDMALQTLHDMNS 147
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L+ C + ++ N L VL +R A + + P + D + NIVIK C G +
Sbjct: 148 LFHCSPSTRTFNFVLNVLVNTRLYAAARELFLHAP-PLGVSPDACTLNIVIKGLCARGEM 206
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A+ V+ E +LG + + TY TL+ + R E GL M +G ++A +NV
Sbjct: 207 DAAFGVLEEFHELGCEANARTYATLMKGLCEKGRVEEAFGLLEKMEEEGVETDVAVYNVL 266
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L R + +++ M G+ P+E TYN V+ G G ++ K V M +
Sbjct: 267 IGGLRKVGRVDEGWRVLEGMVGRGVCPNEGTYNEVLCGLVEKGRVEEGKGVVERMGNKGF 326
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+P+ Y+ ++ C++G + D K +VP
Sbjct: 327 VPSFGAYKDLVKGFCEKGLVGEVEWVVWDMAWKGFVP 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P+ TFN + LVN R A +L G+ PD T N+VIKG C G +D A
Sbjct: 151 CSPSTRTFNFVLNVLVNTRLYAAARELFLHAPPLGVSPDACTLNIVIKGLCARGEMDAAF 210
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
V N + Y T++ LC++G A+ + + ++ V + L+ GL
Sbjct: 211 GVLEEFHELGCEANARTYATLMKGLCEKGRVEEAFGLLEKMEEEGVETDVAVYNVLIGGL 270
Query: 372 KK 373
+K
Sbjct: 271 RK 272
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 2/288 (0%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ V L ++FD + L+ + + ++M A A+D F M
Sbjct: 162 SYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKM 221
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
+G + ++N L L + R +K + E+ + + D SFN ++ +C+ +
Sbjct: 222 DQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQEL--RGSVPPDESSFNTLVHGWCKARM 279
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+++A +M EM++ G KP VITYT+LI A+ + + + N M KGC PN+ T+ +
Sbjct: 280 MNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTI 339
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ L R+ +A + ++ G PD YN +I R+G L+ A V M
Sbjct: 340 VMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTG 399
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ P + T+I C A M +++ P + T + LL+
Sbjct: 400 VRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLK 447
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA M+ A D +M +G K +V + + ++ +D + + A L E+ K
Sbjct: 274 WCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSK-GCPP 332
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ IV+ A + G +A + +++ G PD Y +LI + R E N +
Sbjct: 333 NVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVV 392
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P +ATFN I + ++ A K++ M+ +PD TY ++K C+
Sbjct: 393 DKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKR 452
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ + + + M + + P+ Y ++ +LC+ G + + ++ + K + P +T
Sbjct: 453 QWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETF 512
Query: 365 SALLEGLKKNN 375
+ E L K N
Sbjct: 513 DLVAEKLDKAN 523
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 92/226 (40%), Gaps = 5/226 (2%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D A F M + + S+N ++ + D + ++ +M ++G + T
Sbjct: 139 DWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATM 198
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ- 283
T ++ +R +N M G + NV + L +R + G Q
Sbjct: 199 TKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKER---SVKRARGAFQE 255
Query: 284 -RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
R + PDE ++N ++ G+C++ ++ A+ + M P+ Y ++I C E DF
Sbjct: 256 LRGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDF 315
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y + + K P+V T + ++ L K + +A I V+
Sbjct: 316 QTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVR 361
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 3/210 (1%)
Query: 134 AMD-TFYDMHLYGCKRTVKSLNAALKVL-TESRDLKAIQAFL-MEVPEKFHIQFDIFSFN 190
AMD F M G V S NA +K L E + +A++ + M ++ ++ S+N
Sbjct: 145 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYN 204
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
VI F + G +DKAY + EM G+ PDV+TY +LI K + + M K
Sbjct: 205 TVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK 264
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T+N+ I+ + + +A +L+ M G++PD VTY+L+I+ +C+ G A
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ V+ +M+ + PN IY ++H +G
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKG 354
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A F++M G V + N+ + L +++ + A L + +K + D
Sbjct: 212 KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK-GVMPDT 270
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++NI+I+ +C +G L++A ++ +M G++PDV+TY+ LI + K R +++
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KG PN +++ + K L+ LM R GI + +N++I + + G
Sbjct: 331 MVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 390
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A ++ M L P+ Y T+IH LC+ G A + + P++ + ++
Sbjct: 391 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS 450
Query: 367 LLEGL 371
L+ GL
Sbjct: 451 LIHGL 455
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 152 SLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
+LN +K L + +R A+ +PE + D+FS+N +IK C +A +++
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTP-DVFSYNALIKGLCVEKKSQEALELLI 186
Query: 211 EMQKLG---VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
M G P+V++Y T+I F+K+ + L++ M+ +G P++ T+N I L
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ +A ++ M G+ PD TYN++I+G+C G L+ A ++ M G L P+
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y +I Y C+ G A + ++K P+ LL G
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 349
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I F+ +FNI+I A+ + G +DKA EM++ G++PDV++Y+T+I K R E
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+N MV +G PN+ +F I L + + +L M GI PD + N ++
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G + A+ + ++ + P+ Y T+I C G + + + P
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550
Query: 362 DTISALLEGLKKNNQ 376
T ++LL G KN +
Sbjct: 551 WTYNSLLNGYFKNGR 565
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 188 SFNIVIKAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ N +IK C+ D A +V M +LG PDV +Y LI + + + L
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 247 MVCKG---CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G C PN+ ++N I + +A L M G+ PD VTYN +I G C+
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ +D A + M + +MP+ + Y MI C G A + K P V T
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
S L++ K + +A ++ + R+
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRK 334
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 3/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQ 183
Y K G + AM F +M G + V S + + +L ++ R A+ F V E +
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG--LS 442
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+I SF +I C +G K + EM G+ PD I T++ K+ R
Sbjct: 443 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 502
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+++++ G P++ ++N I + ++ K + M G+ PD TYN ++ G+ +
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G ++ A +Y M + + M+H L Q G A + + + ++T
Sbjct: 563 NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIET 622
Query: 364 ISALLEGLKKNN 375
+ +L GL +N+
Sbjct: 623 YNTVLGGLCENS 634
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E R ++A F M + ++ D+ S+N +I +C +G +D++ + M +G++PD
Sbjct: 493 EGRVVEAQDFFDMVI--HIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
TY +L++ ++K+ R E L+ M K T N+ + L R A +L
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M G + TYN V+ G C + +D A +++ + + + + + +I+ L + G
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ A + + + VP V T S +++
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIK 698
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G ++ A+ + +M K + N L L ++ + A + M++ ++ Q
Sbjct: 560 YFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR-GTQL 618
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I ++N V+ CE +D+A + +++ + DV T++ +I+A K R + L+
Sbjct: 619 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLF 678
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +G P++ T+++ I+ + + +++ L M++ G D N++++
Sbjct: 679 SAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEK 738
Query: 305 GHL 307
G +
Sbjct: 739 GDV 741
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 83/187 (44%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++F + NI++ + G + A + ++M G + + TY T++ +++ +
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ + K ++ TF++ I L+ R +A L M G PD +TY+L+IK
Sbjct: 641 RMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH 700
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G L+ + ++ +M + + ++ L ++GD A +KN+
Sbjct: 701 IEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEA 760
Query: 362 DTISALL 368
T + L+
Sbjct: 761 STAALLI 767
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A +M G + + N + L+ + ++ +A L V + D
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG--RSGEAVL--VMQGMTTTPDT 156
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I FC+ G +D+AY + EM Q+ G PD TY+ LI+ K + + L
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 246 LMVC-KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ K C ++ FN + + +A +L+ M G PD VTY+ +I G CR
Sbjct: 217 EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRC 276
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D + M+ R P+ Y ++ LC+ G A + K ++ P+ T
Sbjct: 277 GDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTY 336
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR-----VPHFSSNQLSAFKSILSKS 409
S + +GL K ++ AN ++ ++ + V F + LS K +L ++
Sbjct: 337 SLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRA 386
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+L+A L E+ ++ + +N + A C+ G + +A V+ M+ KPDV+T+
Sbjct: 33 ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTF 92
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TLI+ K R + + + M G NL T+N I L + RS +A + +MQ
Sbjct: 93 NTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQG 149
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFN 343
PD TYN +I GFC+SG +D A M R P+ Y +I+ LC+ +
Sbjct: 150 MTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLR 209
Query: 344 LAYIMCKDSM-KKNWVPSVDTISALLEGLKK 373
A + ++ + +K+ SV + L++G K
Sbjct: 210 KADELLQEMIGRKDCCASVVAFNTLVDGYCK 240
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNR-PEIGN 241
FD +++ ++++A C G L A ++ EM Q+ G+ P Y + A K + PE
Sbjct: 16 FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ N M C P++ TFN I L R +A +++ M+R G + VTYN +I G
Sbjct: 76 VVKN-MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPS 360
+G A V M G P+ + Y +IH C+ G+ + AY ++ + P
Sbjct: 135 SSAGRSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
T S L+ GL K++ KA+ ++
Sbjct: 192 TFTYSILINGLCKSSNLRKADELL 215
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G +K A M G + + A L + ++ L E+ K ++
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK-GLEL 396
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I+++N ++ C+ G +D+A +M +M+ G PD +TYTTL+ A+ K + L
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + P + TFNV + KL+ M GI P+ TYN +IK +C
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ ++Y M + ++P+ Y +I C+ + A+ + +D + K + +V +
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 576
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+AL++G K + +A + ++R
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRR 601
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M + G K + N + +L ++ + + L E+ + I D + +I FC++
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE-GIAPDGVIYTTLIDGFCKL 271
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + AY + EMQK + PD ITYT +I + R + L++ MVCK P+ T+
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
I + + +A L M + G+ P+ VTY + G C+ G +D A ++ M
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
+ L N Y ++++ LC+ G+ + A + KD + P T + L++ K+ + +
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451
Query: 380 ANTIM 384
A+ ++
Sbjct: 452 AHELL 456
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 173 LMEVPEKFH------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ME + FH ++ D ++ +I +C+ G + +A+ + +M ++G+ P+++TYT
Sbjct: 309 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 368
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L K + N L + M KG N+ T+N + L QA KLM M+ G
Sbjct: 369 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD VTY ++ +C+S + A ++ ML R L P + +++ C G
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 488
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
+ K ++K +P+ T ++L++ Q C N + A +
Sbjct: 489 KLLKWMLEKGIMPNATTYNSLIK------QYCIRNNMRATTE 524
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L + +K I D ++ VI C+ G + +A + EM ++PD +TYT LI +
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + + L N M+ G PN+ T+ L AN+L+ M R G+E +
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN ++ G C++G++D A K+ M P+ Y T++ C+ + A+ + +
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459
Query: 353 MKKNWVPSVDTISALLEGL 371
+ + P+V T + L+ G
Sbjct: 460 LDRELQPTVVTFNVLMNGF 478
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 1/237 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I A+ DM + G + + +SR++ L ++ ++ +Q +
Sbjct: 410 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR-ELQPTV 468
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ FC G+L+ ++ M + G+ P+ TY +LI + N ++
Sbjct: 469 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 528
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P+ T+N+ I+ R +A L M G +YN +IKGF +
Sbjct: 529 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 588
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
A++++ M L+ +R+IY EG L +C ++++K V + T
Sbjct: 589 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 227 LISAFYKDNRPEIG----NGLWNLMVCKGCFPNLATFNVRIQHL--------VNKRRSWQ 274
LI F+ + ++G L++ M+ G ++ + N+ I HL + + W
Sbjct: 148 LIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWV 207
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
KL+ MQ G++P+ TYN VI C++G + A++V M+ + P+ IY T+I
Sbjct: 208 L-KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
C+ G+ + AY + + K+ P T +A++ GL + + +A+ +
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 315
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ- 183
Y +A + A+ F M +G K T+ L+ L VL + + K Q V +F +
Sbjct: 154 YSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRA 213
Query: 184 --------------------------------FDIFSFNIVIKAFCEMGILDKAYLVMVE 211
D+ ++N +++AFC+ G + +AY + E
Sbjct: 214 KTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFRE 273
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M G+KPD T++ I A+ + N + + + M PN+ T+N I+ L K +
Sbjct: 274 MGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEK 333
Query: 272 SWQANKLMG-LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+A +L+ +++R G +PD +YN ++ C ++ A ++ S M+ +P++ Y
Sbjct: 334 VEEAYQLLNEIIERSG-QPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYN 392
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN----NQPCKANTIMAL 386
++ L + G F+ A + + +K + PSV T S ++ GL K + CK +M
Sbjct: 393 MLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM-- 450
Query: 387 VQRRVPHFSSN 397
+ +P +SS
Sbjct: 451 IDEGIPPYSST 461
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 108/247 (43%), Gaps = 3/247 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + +S + + +L S+ + FL+E+ E + F +V +A+ +
Sbjct: 103 GFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSD 162
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA-TFNVRI 263
A M + G+KP + L+ K + +++ + K F A T+++ +
Sbjct: 163 AIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRV--KHQFQTRAKTYSILV 220
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + S A K+ M+ D + YN +++ FC+ G + A K++ M +
Sbjct: 221 RGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIK 280
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ + I C+ D +LAY + + + + VP+V T + +++ L K + +A +
Sbjct: 281 PDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQL 340
Query: 384 MALVQRR 390
+ + R
Sbjct: 341 LNEIIER 347
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +A I A +M Y V + N +K L + ++ L E+ E+ Q
Sbjct: 293 YCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSG-QP 351
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S+N ++ CE ++ A ++ M K PD +Y L+ + R + +W
Sbjct: 352 DAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVW 411
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKR-RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M KG +P+++T++V + L K+ + +A K +M GI P T ++
Sbjct: 412 ESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIG 471
Query: 304 SGHLD 308
G LD
Sbjct: 472 LGLLD 476
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 94 VLEHLMKLKYFKLVWGFYKEILECGY-PASLYFFNILMHRFCKEGDIRLAQSVFDAITKW 152
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V+++ TL++ + + + G L N M G P++ T++V I L + + A
Sbjct: 153 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDA 212
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ VT+ +I G C++G +D+A ++Y ML + L P+ Y T+ +
Sbjct: 213 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYG 272
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 273 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGD 313
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K ++ Y LY N + + D++ Q+ + + K+ ++ + S
Sbjct: 109 GFYKEILECGYPASLY-------FFNILMHRFCKEGDIRLAQS-VFDAITKWGLRPSVVS 160
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FN ++ + +G LD+ + + M GV+PDV TY+ LI+ K+++ + N L++ M+
Sbjct: 161 FNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 220
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG PN TF I R A ++ M + PD +TYN + G C+ G L
Sbjct: 221 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLK 280
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M + L P++ Y T+I C+EGD A+ K +++N +AL+
Sbjct: 281 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALI 340
Query: 369 EGLKKNNQPCKANTIM 384
GL + + A ++
Sbjct: 341 SGLCQEGRSVDAEKML 356
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 9/268 (3%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 125 FFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKN 182
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 183 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 242
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N L K QA+ L+ M G++PD++TY
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 302
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G ++ A + M+ + + +Y +I LCQEG A M ++ +
Sbjct: 303 TLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSV 362
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ T + ++ N+ CK +
Sbjct: 363 GLKPNXGTYTMII------NEFCKKGDV 384
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N + C+ G L +A+ ++ EM G+KPD ITYTTLI K+ E
Sbjct: 262 DLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQ 321
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + + + I L + RS A K++ M G++P+ TY ++I FC+
Sbjct: 322 KRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKK 381
Query: 305 GHLDMAKKVYSAM 317
G + K+ M
Sbjct: 382 GDVWTGSKLLKEM 394
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 109/283 (38%), Gaps = 27/283 (9%)
Query: 9 RFCHTA----AAAAADAIALNNIR--AVSLNKFPNREPLVDKPLEPPALVKLKAERDPEK 62
RFC A + DAI +R VS N N ++L D ++
Sbjct: 132 RFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMN------------GYIRLG---DLDE 176
Query: 63 LFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM 122
F+L K H V + Y + ++ L + D L + L +G +
Sbjct: 177 GFRL-KNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEM--LDKGLVPNGVTFTT 233
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ G K G + AM+ + M + + N L + DLK + E+ K
Sbjct: 234 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMK- 292
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D ++ +I C+ G ++ A+ M + ++ D + YT LIS ++ R
Sbjct: 293 GLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDA 352
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ M+ G PN T+ + I K W +KL+ MQ
Sbjct: 353 EKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
A + A++ ++ C + S N +K L +SR L + AF+ E+ KF ++ ++
Sbjct: 176 ADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLV 235
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ I+I C L +A ++ +++ G KPD Y T++ + +R ++N M
Sbjct: 236 TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 295
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+L T+N I L R +A KL+ +M G PDEVTY ++ G CR G
Sbjct: 296 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGET 355
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
A + M + PN Y T++H LC+ F+ A
Sbjct: 356 LAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKA 393
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 152 SLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
+++ A++ L + + + E+ K H DI+S+N ++K C+ L Y + E
Sbjct: 165 TVDLAVRSLCTADRVDDAVELIKELSSK-HCSPDIYSYNFLVKNLCKSRTLSLVYAFIDE 223
Query: 212 MQ-KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
M+ K VKP+++TYT LI L +++ +G P+ +N ++
Sbjct: 224 MRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLS 283
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A ++ M+ G+EPD +TYN +I G +SG + AKK+ M + P+ Y
Sbjct: 284 RGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYT 343
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
++++ +C++G+ A + ++ K P+ T + LL GL K+
Sbjct: 344 SLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKS 387
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D + ++ +++ C +D A ++ E+ PD+ +Y L+ K +
Sbjct: 159 ISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVY 218
Query: 242 GLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M K PNL T+ + I ++ N + +A +L+ +++ G +PD YN ++KG
Sbjct: 219 AFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKG 278
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C A +VY+ M + + P+ Y T+I L + G + A + + +K P
Sbjct: 279 YCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPD 338
Query: 361 VDTISALLEGLKKNNQPCKANTIMALV 387
T ++L+ G+ + K T+ AL
Sbjct: 339 EVTYTSLMNGMCR-----KGETLAALA 360
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKL--GVKPDVITYTTLISAFYKDNRPEIG-----NG 242
N +++++ + ++ + + M K PD TY L++ K + +
Sbjct: 90 NSLLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQ 149
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
NLMV G P+ T ++ ++ L R A +L+ + PD +YN ++K C
Sbjct: 150 TLNLMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLC 209
Query: 303 RSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQ 338
+S L + M + + PN Y +I +C
Sbjct: 210 KSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCN 246
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 254 PNLATFNVRIQHLVNKRRSWQA-----NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P+ +T+++ + H S + ++ + LM GI PD+ T +L ++ C + +D
Sbjct: 121 PDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVD 180
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
A ++ + + P+ Y ++ LC+ +L Y
Sbjct: 181 DAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVY 218
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A +M G + + N + L+ + ++ +A L V + D
Sbjct: 101 KAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG--RSGEAVL--VMQGMTTTPDT 156
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N +I FC+ G +D+AY + EM Q+ G PD TY+ LI+ K + + L
Sbjct: 157 QTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ 216
Query: 246 LMVC-KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ K C ++ FN + + +A +L+ M G PD VTY+ +I G CR
Sbjct: 217 EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRC 276
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D + M+ R P+ Y ++ LC+ G A + K ++ P+ T
Sbjct: 277 GDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTY 336
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR-----VPHFSSNQLSAFKSILSKS 409
S + +GL K ++ AN ++ ++ + V F + LS K +L ++
Sbjct: 337 SLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDRA 386
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+L+A L E+ ++ + +N + A C+ G + +A V+ M+ KPDV+T+
Sbjct: 33 ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTF 92
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TLI+ K R + + + M G NL T+N I L + RS +A + +MQ
Sbjct: 93 NTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQG 149
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFN 343
PD TYN +I GFC+SG +D A M R P+ Y +I+ LC+ +
Sbjct: 150 MTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLR 209
Query: 344 LAYIMCKDSM-KKNWVPSVDTISALLEGLKK 373
A + ++ + +K+ SV + L++G K
Sbjct: 210 KADELLQEMIGRKDCCASVVAFNTLVDGYCK 240
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNR-PEIGN 241
FD +++ ++++A C G L A ++ EM Q+ G+ P Y + A K + PE
Sbjct: 16 FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAME 75
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ N M C P++ TFN I L R +A +++ M+R G + VTYN +I G
Sbjct: 76 VVKN-MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD-SMKKNWVPS 360
+G A V M G P+ + Y +IH C+ G+ + AY ++ + P
Sbjct: 135 SSAGRSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
T S L+ GL K++ KA+ ++
Sbjct: 192 TFTYSILINGLCKSSNLRKADELL 215
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
+ K A F +M G + + N+ L V ++R + E+ E+ + +
Sbjct: 257 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVT 315
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I ++ + G+L++A + EM+ G+KPDV+TYTTLIS + + + ++ MV
Sbjct: 316 YNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC PNL T+N I+ + + + + ++ G PD VT+N ++ F ++G
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDS 435
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
V+ M +P R Y ++I + G F+LA + K M+ P V T +A+L
Sbjct: 436 EVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVL 495
Query: 369 EGLKKNNQPCKANTIMALVQRR 390
L + + +A + A ++ R
Sbjct: 496 SALARGGRWEQAEKLFAEMEER 517
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF A R ++Y++ + A A+R D ++ L + S +
Sbjct: 508 EKLF----AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++++ K + A F ++ C + LNA + + ++R ++ ++ L + E
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES- 622
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I ++N ++ + +G +K ++ E++ GV+PD +Y T+I A+ + + +
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L++ M C G P++ T+N+ ++ V+ +A +L+ M G +P+E TYN +++G
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 742
Query: 301 FCRSGHLDMAK 311
+CR+G L AK
Sbjct: 743 YCRNGKLTDAK 753
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 145/316 (45%), Gaps = 8/316 (2%)
Query: 100 EHLLEHQKSLPQ-----GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKS 152
+ LLE +L Q G + + ++ G +AG I A+ + +M GCK + +
Sbjct: 326 DGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCT 385
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
NA +K+ + A E+ + DI ++N ++ F + G+ + V EM
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDELRSAGFVP-DIVTWNTLLAVFGQNGLDSEVSGVFKEM 444
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+K G P+ TY +LIS++ + ++ ++ M+ G +P+++T+N + L R
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 504
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
QA KL M+ +PDE +Y+ ++ + + LD K + + R+ P+ + +T+
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ + + A + +K ++ ++A++ KN K I++L++
Sbjct: 565 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 393 HFSSNQLSAFKSILSK 408
+ S+ ++ + S+
Sbjct: 625 NLSAATYNSLMHMYSR 640
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+ G A+ ++H G + L A++V+ + L A L P D
Sbjct: 117 GQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP-----D 171
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--EIGNGL 243
++ ++ AF G A V M GV+P ++TY ++ + K P E+ L
Sbjct: 172 AGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE-L 230
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G P+ T+N I + +A ++ M+ G EPD+VT+N ++ + +
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ D A +V M P+ Y ++I ++G A + ++ K P V T
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVT 350
Query: 364 ISALLEGLKK 373
+ L+ GL +
Sbjct: 351 YTTLISGLDR 360
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 116/319 (36%), Gaps = 36/319 (11%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G+ AM + M G V + NA L L + + E+ E+ +
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER-DCKP 521
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S++ ++ A+ LDK + ++ ++P TL+ K N +
Sbjct: 522 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 581
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF------------------- 285
+ K C ++ N + R + K++ LM+
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 286 ----------------GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
G+ PD +YN VI + R G + A +++S M L P+ Y
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ F A + + + + P+ T ++++EG +N + A ++ + +
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
Query: 390 RVPHFSSNQLSAFKSILSK 408
P +S + +L+K
Sbjct: 762 LHPGYSKQEQQNLFEVLAK 780
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 101/195 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ ++ +I C++G L A + EM G+KP+V+ YT+LIS + K+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M KG PN TF I L + R +ANKL G M + + P+EVTYN++I+G
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G+ A ++ M+ + L+P+ Y+ +I LC G + A D + +
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600
Query: 362 DTISALLEGLKKNNQ 376
SALL G K +
Sbjct: 601 MCFSALLHGYCKEGR 615
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + A+ ++ +++K GV P + Y LI++ KD + + L+N M KG FPN T+
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
++ I + + A +G M GI+ Y+ +I G C+ G L AK ++ M+
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
L PN IY ++I C+EG+ + A+ + + K P+ T +AL+ GL N+ +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE 513
Query: 380 ANTIMA 385
AN +
Sbjct: 514 ANKLFG 519
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A+ M G K TV ++ + + L+A ++ E+ ++
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN-GLKP 458
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + +I +C+ G L A+ + EM G+ P+ T+T LIS NR N L+
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV PN T+NV I+ + + +A +L+ M G+ PD TY +I G C +
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ + + G + N + ++H C+EG + A C++ + + +
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCY 638
Query: 365 SALLEGL 371
S L+ G+
Sbjct: 639 SVLIYGI 645
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I C++G++DKA L+ EM P+ TY + + E L
Sbjct: 704 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 763
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++++ +G N T+N+ I+ R +A +++ M GI PD ++Y+ +I +CR
Sbjct: 764 DVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A K++ +ML R + P+ Y +I+ C G+ A+ + D M++ P+ T
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 882
Query: 365 SALLEG 370
++L+ G
Sbjct: 883 NSLIHG 888
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 8/290 (2%)
Query: 59 DPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARR-FD--YIEHLLEHQKSLPQGRRE 115
+PE LF+ F +++ + F+ + RR D + L+ LPQ R
Sbjct: 125 NPEGLFESF-LDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTL 183
Query: 116 GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
++ ++ + + A+ F ++ G + V A ++ L E +D + +
Sbjct: 184 SGVLNGLI---RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ E + ++N+ I+ C+ + +A + + G++ DV TY TL+ K
Sbjct: 241 M-ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
E G + N M+ G P+ A + + L K A L+ +++FG+ P YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+I C+ G LD A+ +++ M + L PN Y +I C+ G ++A
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 2/315 (0%)
Query: 76 VIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAM 135
++ + Y + +S L R + + Q E ++ Y K G + A+
Sbjct: 561 LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDAL 620
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
D +M G + + + + +D ++I L ++ ++ ++ D + +I A
Sbjct: 621 DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ-GLRPDNVLYTTMIDA 679
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+ G L A+ + M G P+V+TYT LI+ K + L M+ PN
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
T+ + +L ++ +A +L ++ G + VTYN++I+GFC+ G + A +V
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLV 798
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M+ + P+ Y T+I+ C+ GD A + + + + P + L+ G
Sbjct: 799 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 858
Query: 376 QPCKANTIMALVQRR 390
+ KA + + RR
Sbjct: 859 ELTKAFELRDDMMRR 873
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 35/150 (23%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI+I+ FC++G + +A V+V M G+ PD I+Y+T+I + + + LW M
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G + PD V YN +I G C +G L
Sbjct: 836 LNRG-----------------------------------VNPDTVAYNFLIYGCCVTGEL 860
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
A ++ M+ R + PNR Y ++IH C
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 211 EMQKLGVKPDVITYTTLISAF--YKD---NRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
E+ G++PDV YT ++ + KD R IG M GC ++AT+NV I+
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGR-----MESSGCDLSVATYNVFIRG 259
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L +R W+A ++ L+ G+ D TY ++ G C+ + +++ + M+ +P+
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPS 319
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ L ++G+ A+ + K PS+ +AL+ + K+ + +A ++
Sbjct: 320 EAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 93/187 (49%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+++I+ + + +V+ M G+ P + T + +++ + + + L++
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+V G P++ + ++ L + +A +++G M+ G + TYN+ I+G C++
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ + + + L + Y T++ LC+ +F M + ++ +VPS +S
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325
Query: 367 LLEGLKK 373
L++GL+K
Sbjct: 326 LVDGLRK 332
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N++I A+C++G +D + + EM++ G+ PDV TY LI+ ++ E L++ +
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG P+L TF++ ++ K S +A L+ M + G++P +TYN+V+KG+C+ G+L
Sbjct: 464 SKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 309 MAKKVYSAMLG-RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A + + M RRL N Y ++ Q+G A ++ + ++K VP+
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 38/231 (16%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK-------- 233
IQ ++F+FN+VI A C+ G ++KA VM +M+ G P+V++Y TLI + K
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 234 ------------DNRPEIG------NGLW---NL---------MVCKGCFPNLATFNVRI 263
D P + +G W NL M+ + PN+ ++N I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L N + +A + M G++P+ +TYN +I GFC++ L A ++ ++ G+ +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
P ++Y +I C+ G + + + ++ ++ VP V T + L+ GL +N
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 7/262 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL----KVLTESRDLKAIQAFLMEVPEKFHI 182
K G + A D DM +YGC V S N + K+ + KA A L E+ E +
Sbjct: 235 KTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA-DAVLKEMVEN-DV 292
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
++ +FNI+I F + L + V EM VKP+VI+Y +LI+ +
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ + MV G PNL T+N I +A + G ++ G P YN++I +C
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G +D + M ++P+ Y +I LC+ G+ A + D + +P +
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLV 471
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T L+EG + + KA ++
Sbjct: 472 TFHILMEGYCRKGESRKAAMLL 493
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
++ Q ++P R ++ Y K G I +M G V + N + L
Sbjct: 392 VKGQGAVPTTRMYNMLIDA---YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+ +++A + ++ K D+ +F+I+++ +C G KA +++ EM K+G+KP +
Sbjct: 449 NGNIEAAKKLFDQLTSKGLP--DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGL 281
TY ++ + K+ + + M + N+A++NV +Q K + AN L+
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Query: 282 MQRFGIEPDEVTYNLV 297
M G+ P+ +TY +V
Sbjct: 567 MLEKGLVPNRITYEIV 582
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N++IK FC+ G LD+A + ++ G +PDVI++ ++ + R L
Sbjct: 250 DVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLL 309
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KGC P++ TFN+ I L K +A ++ +M + G P+ ++N +I+GFC
Sbjct: 310 ATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNG 369
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A + M+ R P+ Y ++ LC++G + A ++ K PS+ +
Sbjct: 370 KGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISY 429
Query: 365 SALLEGLKK 373
+ +++GL K
Sbjct: 430 NTVIDGLLK 438
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G AM M GC +V + N + L + L L +P+ H +
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP-NSR 357
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
SFN +I+ FC +D+A + M G PD++TY L++A KD + + + + +
Sbjct: 358 SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 417
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KGC P+L ++N I L+ ++ A +L+ M G++PD +T V+ G R G +
Sbjct: 418 SSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKV 477
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K + + + PN IY ++I LC+ +LA D + K P+ T + L
Sbjct: 478 REAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTL 537
Query: 368 LEGL 371
++G+
Sbjct: 538 IKGI 541
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + AM F +M GCK V + N +K + L FL ++P + Q D+
Sbjct: 228 KESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS-YGCQPDV 286
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S N+++++ C G A ++ M + G P V+T+ LI+ + + +
Sbjct: 287 ISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEM 346
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN +FN IQ N + +A + + +M G PD VTYN+++ C+ G
Sbjct: 347 MPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + S + + P+ Y T+I L + G LA + ++ K P + T ++
Sbjct: 407 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTS 466
Query: 367 LLEGLKKNNQ 376
++ GL + +
Sbjct: 467 VVGGLSREGK 476
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+M + E+ D+ S+N++I +C+ G +++A V+ ++GV P+ TY ++ +
Sbjct: 136 IMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVL---DRMGVSPNAATYDAVLCSLC 192
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + + + C+P++ T V I + QA KL M+ G +PD V
Sbjct: 193 DRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVV 252
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN++IKGFC+ G LD A + + P+ + ++ LC G + A +
Sbjct: 253 TYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATM 312
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++K +PSV T + L+ L + KA ++ ++ +
Sbjct: 313 LRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK 349
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIF 187
G++ A++ M +G +S N ++ + + +AI+ + V + DI
Sbjct: 335 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP--DIV 392
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI++ A C+ G +D A +++ ++ G P +I+Y T+I K + E+ L M
Sbjct: 393 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+L T + L + + +A K ++RF I P+ YN +I G C+S
Sbjct: 453 CYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQT 512
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+A + M+ + P Y T+I + EG
Sbjct: 513 SLAIDFLADMVAKGCKPTEATYTTLIKGITYEG 545
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G K+A + G V S N + +S +++ + V ++ +
Sbjct: 124 FCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA----LRVLDRMGVSP 179
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++ V+ + C+ G L +A V+ + PDV+T T LI A K++ L+
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 239
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M KGC P++ T+NV I+ R +A + + + +G +PD +++N++++ C
Sbjct: 240 NEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSG 299
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A K+ + ML + +P+ + +I++LCQ+G A + + K P+ +
Sbjct: 300 GRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSF 359
Query: 365 SALLEGL 371
+ L++G
Sbjct: 360 NPLIQGF 366
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++ E G+ M KG P++ I+ R+ A+++MG+++ G D
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+YN++I G+C+SG ++ A +V M + PN Y ++ LC G A +
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 353 MKKNWVPSVDTISALLEGLKKNN 375
++ P V T + L++ K +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKES 230
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ + GC ++ S N + L + + L E+ K ++ D+
Sbjct: 403 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK-GLKPDL 461
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ V+ G + +A +++ ++P+ Y ++I+ K + +
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM------GLMQRFGIE 288
MV KGC P AT+ I+ + + + A+KL GL++R +E
Sbjct: 522 MVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVE 569
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPA-SLYFFNILMHRFCKDGDIRVAQSVFDAITKW 171
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I L + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ V + +I G C++G +D+A ++Y ML + L+P+ Y T+I+
Sbjct: 232 NELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD + + + K P T + L++G K
Sbjct: 292 LCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGD 332
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ + +TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K Q + L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ +M + ++ D + YT LIS ++ R +
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDV----------ITYTTLISAFY 232
DI+ F+ +I A+ E G L A + K V D + Y L+ FY
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ ++ C G +L FN+ + A + + ++G+ P V
Sbjct: 131 KE-----------ILEC-GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV 178
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
+YN ++ G+ R G LD ++ SAML + P+ Y +I+ LC+E + A + +
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
+ K VP+ + L++G KN +
Sbjct: 239 LVKGLVPNGVIFTTLIDGHCKNGR 262
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 133/266 (50%), Gaps = 6/266 (2%)
Query: 119 MRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLME 175
M ++M+ YGKAG+++ ++ F M G +RT+KS +A KV+ R + A + F
Sbjct: 82 MWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKM 141
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ E I+ +FN++I F G +D A +M+ + PDV+TY T+I+ Y+
Sbjct: 142 LSEG--IEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVK 199
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
+ + + M K P + T+ I+ V+ + A +L+ M+ +GI+P+ +TY+
Sbjct: 200 KMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYS 259
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMP-NRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
++ G C +G + A+ + M+ + + P + I+ +I C+ G+ + A + K ++
Sbjct: 260 TLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIR 319
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKA 380
+ L+E K Q +A
Sbjct: 320 LSVPTEAGHYGVLIENFCKAGQHDRA 345
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
+++L + L + L+++P+K +++D + ++I ++ + GI+ ++ + +M++LG
Sbjct: 52 IEILGRASKLNHARCILLDMPKK-GLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELG 110
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
V+ + +Y L + R + +N M+ +G P TFNV I + A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAM 170
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ M+ I PD VTYN +I G R +D A+K + M G+ + P Y T+I
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGY 230
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ A + ++ P+ T S LL GL + +A +I+
Sbjct: 231 VSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSIL 278
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 8/297 (2%)
Query: 82 AFEDTVSRLAGA-RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
A+ D ++RL + + HLL+ P+ R+ +MR M+ ++G + A + F +
Sbjct: 212 AWSDLMNRLPSVPEAYAFYLHLLDAGVP-PEARQFNMLMRDMI---RSGKLASARNVFDE 267
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M G + TV + N + + ++ DL A L + K I D++++ I+ C+ G
Sbjct: 268 MLRRGVQPTVVTFNTLMSGMCKASDLNNANA-LRGLMAKAGIAPDVYTYGAFIQGLCKTG 326
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + EM + G+ P+ + TTLI A K+ G L M +G +L +N
Sbjct: 327 RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYN 386
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ R AN ++ M++ G++PD+VTY +I G C+ G LD A ++ M
Sbjct: 387 ALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDE 446
Query: 321 RLMPNRKIYQTMIHYLCQEG-DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + Y +I L + G + I+C + M+ P T + +++ KN
Sbjct: 447 GVALDDVTYTALISGLSKAGRSVDAERILC-EMMEAGLQPDNTTYTMVIDAFCKNGD 502
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 9/254 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR----DLKAIQAFLMEVPEKFHI 182
K G I+ AM+ F +M C+R + L L ++ D+ A E+ + +
Sbjct: 324 KTGRIQDAMEMFEEM----CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR-GV 378
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ D+ ++N ++ FC + + A ++ EM+K G+KPD +TYTTLI K+ +
Sbjct: 379 KADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME 438
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ M +G + T+ I L RS A +++ M G++PD TY +VI FC
Sbjct: 439 MKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFC 498
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++G + K M + P Y +++ C G A ++ + P+
Sbjct: 499 KNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDI 558
Query: 363 TISALLEGLKKNNQ 376
T + LL+G K+ +
Sbjct: 559 TYNILLDGHCKHGK 572
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 39/243 (16%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + ++ ++M G K + + NA + RD+KA + E+ K ++ D
Sbjct: 359 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM-RKDGLKPDK 417
Query: 187 FSFNIVIKAFCEMGILDKAY-----------------------------------LVMVE 211
++ +I C+ G LD A ++ E
Sbjct: 418 VTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE 477
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G++PD TYT +I AF K+ + G M KG P + T+NV + + +
Sbjct: 478 MMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQ 537
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A+ L+ M G+ P+++TYN+++ G C+ G + +++ SA + ++ + +Y +
Sbjct: 538 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSA---KGMVSDFGVYTS 594
Query: 332 MIH 334
+I+
Sbjct: 595 LIN 597
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A +M + G K ++ N ++ + ++ ++ L E+ +K ++
Sbjct: 388 KFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM-KKSNLVPTA 446
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++I C G ++ A V M LGVKP+ + YTTLI ++ R + + +
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKV 506
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ +N I L R+ +A + M G++P+ TY +I G+C+SG
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A + + MLG + PN + +I C+EG A + + + ++ P V T SA
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626
Query: 367 LLEGLKKNNQ 376
L+ GL +N +
Sbjct: 627 LIHGLLRNGK 636
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 35/256 (13%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE--- 238
++ ++F++N ++K C+ G ++KA ++ EM +G+KPD TY +I + K+
Sbjct: 372 VKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVK 431
Query: 239 --------------------IGNGL------------WNLMVCKGCFPNLATFNVRIQHL 266
I NGL + +MV G PN + I+
Sbjct: 432 DLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGH 491
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
V + R +A +++ +M + G++PD + YN VI G C+S ++ AK M+ R L PN
Sbjct: 492 VQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
Y +IH C+ G+ +A K+ + P+ +AL++G K +A +I
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611
Query: 387 VQRRVPHFSSNQLSAF 402
+ R H SA
Sbjct: 612 MLGRSVHPDVRTYSAL 627
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 8/224 (3%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
+ E R +A++ +++V +K +Q D+ +N VI C+ +++A +VEM + G+KP
Sbjct: 492 VQEGRFQEAVR--ILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP 549
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+V TY LI + K ++ + + M+ G PN I + + +A +
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIF 609
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M + PD TY+ +I G R+G L A ++ S L + L+P+ Y ++I C++
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
G A+ + + +K P++ T +AL+ GL CKA I
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGL------CKAGEI 707
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
+AG K ++M GC ++ + N + L + ++ +AF L ++ +K + D
Sbjct: 248 RAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD--EAFELKKLMDKKGLVAD 305
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP-------- 237
+F+++I+I F + +A L++ EM G+KP + YT LI F +
Sbjct: 306 VFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKE 365
Query: 238 ---------------------------EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
E + L N M+ G P+ T+N I+ + ++
Sbjct: 366 EMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQ 425
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
+ + L+ M++ + P T ++I G CR G ++ A +V+ M+ + PN IY
Sbjct: 426 NTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYT 485
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMALVQR 389
T+I QEG F A + K KK P V ++++ GL K+ + +A + ++ +++R
Sbjct: 486 TLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER 545
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+ ++ A D +M G K V + A + +S +++ + E+ D+
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+I +C+ G +A + M V PDV TY+ LI ++ + + L +
Sbjct: 588 VC-TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ KG P++ T+N I + +A +L M + GI P+ +TYN +I G C++G
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A++++ + G+ L N Y T+I C+ G+ + A+ + + K P SA
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766
Query: 367 LLEGLKKNNQPCKANTI-MALVQRRVPHFSS 396
L++G +K KA ++ + VQ+ SS
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFASTSS 797
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 113/280 (40%), Gaps = 35/280 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G A F M V++ +A + L + L+ L E EK +
Sbjct: 596 YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP- 654
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I FC+ G + KA+ + M + G+ P++ITY LI+ K E L+
Sbjct: 655 DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELF 714
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+ + KG N T+ I +A +L M G+ PD Y
Sbjct: 715 DGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKE 774
Query: 295 ------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
N ++ GFC+SG + A ++ M+ + + P+ Y
Sbjct: 775 GNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+I Y C+ G A D K+N +P+ T +ALL G
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG 874
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 10/281 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVK----SLNAALKVLTESRDLKAIQAFLMEV 176
I+ + K G I A + +H Y C++ + + NA + L ++ +++ + +
Sbjct: 662 IISGFCKQGGIGKA----FQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P K + + ++ +I +C+ G L KA+ + EM GV PD Y+ LI K+
Sbjct: 718 PGK-GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L+ V KG F + ++ N + + +AN+L+ M ++PD VTY +
Sbjct: 777 TEKALSLFLESVQKG-FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I C++G L A++ + M R LMPN Y ++ G + + + + + K+
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSN 397
P T S +++ K K ++ + ++ + S N
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN 936
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 14/292 (4%)
Query: 80 KYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
K F++ VS GA+R ++ LL L + + Y GM++ + +
Sbjct: 179 KGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN--GMLE--ANVLH 234
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
D++ Y +NA + + + K + L E+ EK + ++N+VI C
Sbjct: 235 DVYTY-----THLINAHFR----AGNAKEGKRLLFEMEEK-GCSPSLVTYNVVIGGLCRA 284
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G +D+A+ + M K G+ DV TY+ LI F K R + M KG P +
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
I + + S +A ++ M G++ + TYN ++KG C+ G ++ A + + M+
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ P+ + Y MI +E + + + + K N VP+ T ++ GL
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 1/265 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G+ A+ F G + N L L ++ L+ F + E ++
Sbjct: 176 YKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEA-NVLH 234
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ +I A G + ++ EM++ G P ++TY +I + + L
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELK 294
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM KG ++ T+++ I ++R +A ++ M G++P V Y +I GF R
Sbjct: 295 KLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQ 354
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A +V ML R + N Y ++ +C+ GD A + + + P T
Sbjct: 355 GDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTY 414
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ ++EG K + +++ +++
Sbjct: 415 NNMIEGYLKEQNTSRVKDLLSEMKK 439
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 2/242 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ F + G T SLNA + +S + L ++ +K H++ D
Sbjct: 773 KEGNTEKALSLFLESVQKGFAST-SSLNALMDGFCKSGKVIEANQLLEDMVDK-HVKPDH 830
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I+I C+ G L +A V+MQK + P+ +TYT L+S + R L++
Sbjct: 831 VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ K P+ T++V I + + + KL+ M + G + +++I CR H
Sbjct: 891 MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEH 950
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ KV + + L + T++ + G + A + K ++ WVP ++
Sbjct: 951 VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELND 1010
Query: 367 LL 368
L+
Sbjct: 1011 LI 1012
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F ++I + + G+ D+A + ++ G ++ L+S K N+ E+ +N M+
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 249 CKGCFPNLATFNVRIQHLVNKR----RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ T+ HL+N + + +L+ M+ G P VTYN+VI G CR+
Sbjct: 229 EANVLHDVYTYT----HLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA 284
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M + L+ + Y +I ++ A +M ++ K P
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344
Query: 365 SALLEGLKKNNQPCKA 380
+AL++G + +A
Sbjct: 345 TALIDGFMRQGDSGEA 360
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL-- 153
FDY + LP + GF++ M M+K + + G + + S
Sbjct: 96 FDY----MGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL-----AEVQGKEVRINSFVY 146
Query: 154 NAALKVLTESRDL-KAIQAF----LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
N L VL + + +AI F +M+ P D ++FNI+I+ C +G +D+A+ V
Sbjct: 147 NNLLSVLVKQNQVHEAIYLFKEYLVMQSPP------DTWTFNILIRGLCRVGGVDRAFEV 200
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLV 267
+M+ G PDV+TY TLI+ K N + G L+ + + C P++ T+ I
Sbjct: 201 FKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFC 260
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+ +A+ L M R GI+P+ +T+N++I GF + G++ A+ +Y M +
Sbjct: 261 KSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVV 320
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+ ++I C+ G N +N P+V T + L+ L K N+ +A + +
Sbjct: 321 TFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQI 380
Query: 388 Q 388
+
Sbjct: 381 K 381
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 37/302 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A + F DM +GC V + N + L ++ +++ E+ + DI
Sbjct: 190 RVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDI 249
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF--------------- 231
++ +I FC+ G + +A + EM + G++P+VIT+ LI F
Sbjct: 250 VTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRK 309
Query: 232 --YKDNRPEI------------------GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
Y D ++ G WN+M + P + T+ V I L + R
Sbjct: 310 MAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENR 369
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A +G ++ I P YN VI GFC++G++D + M +R P++ +
Sbjct: 370 LNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTI 429
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI--MALVQR 389
+I C +G A + + P T+++L+ L K P +A I MAL R
Sbjct: 430 LIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDR 489
Query: 390 RV 391
+
Sbjct: 490 NL 491
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLV-----------------------------------MVEM 212
++N+++++ C+MG D +V + E+
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
Q V+ + Y L+S K N+ L+ + P+ TFN+ I+ L
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR-LMPNRKIYQT 331
+A ++ M+ FG PD VTYN +I G C++ + +++ + R P+ Y +
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
+I C+ G A + ++ M+ P+V T + L++G K +A + R++
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY----RKM 310
Query: 392 PHFS-SNQLSAFKSIL 406
+F S + F S++
Sbjct: 311 AYFDCSADVVTFTSLI 326
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TY L+ + + ++ N +++ M G P+ + + KL+ +
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
Q + + YN ++ + + A ++ L + P+ + +I LC+ G
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAF 402
+ A+ + KD +P V T + L+ GL K N+ + + +Q R S + +
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSD--CSPDIVTY 252
Query: 403 KSILS 407
SI+S
Sbjct: 253 TSIIS 257
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 2/246 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KA + + M G + N + +S D++ + L E+ +F I D
Sbjct: 198 AKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRF-IFPD 256
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD-NRPEIGNGLW 244
+F++N +I +C+ G+ +A + M++ GV PD++TY +LI F ++ N E L
Sbjct: 257 LFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLR 316
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M +G P + T+N ++ L + + AN+L+ M +EPD VT N +I +C+
Sbjct: 317 EVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKI 376
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A KV ML L P++ ++ +IH C+ + + A + + + PS T
Sbjct: 377 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTY 436
Query: 365 SALLEG 370
S L++
Sbjct: 437 SWLVDS 442
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 2/254 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+++ Y + M + A+ F M ++G K + + L L ++R + ++ +
Sbjct: 158 LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV-RV 216
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ +I FN++I A C+ G ++KA ++ EM+ + PD+ TY TLIS + K
Sbjct: 217 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 276
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIK 299
G+ + M G P++ T+N I + + A +L +M+ G+ P VTYN +++
Sbjct: 277 LGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILR 336
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C G + A ++ + M R++ P+ T+I+ C+ GD A + K ++ P
Sbjct: 337 KLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKP 396
Query: 360 SVDTISALLEGLKK 373
T AL+ G K
Sbjct: 397 DQFTFKALIHGFCK 410
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+F +I FC++ +D A + EM G P TY+ L+ ++Y + E L
Sbjct: 397 DQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLP 456
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG F +++ + I+ L + A ++ LMQ G++ D V Y + + ++
Sbjct: 457 DELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKA 516
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQ 330
G A + M RRLM KIY+
Sbjct: 517 GKAIAASDMLDEMDKRRLMITLKIYR 542
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + A D F ++ G + V + A + L S L ++ +K I ++
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNV 260
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ AF + G + +A + EM ++ + PD++TY++L++ +R + N +++L
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL 320
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC ++ ++N I +R KL M + G+ + VTYN +I+GF ++G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A++ +S M + P+ Y ++ LC G+ A ++ +D K+ + T +
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 367 LLEGLKKNNQ 376
++ G+ K +
Sbjct: 441 VIRGMCKTGK 450
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ D+++FNIVI FC + A ++ +M KLG +PD +T +L++ F + NR
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L + MV G P++ +N I L +R A ++R GI P+ VTY +
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G C S A ++ S M+ +++ PN Y ++ + G A + ++ ++ +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALV 387
P + T S+L+ GL +++ +AN + L+
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I DI +++ ++ C +D+A + M G DV++Y TLI+ F
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K R E G L+ M +G N T+N IQ +A + M FGI PD
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKD 351
TYN+++ G C +G L+ A ++ M R + + Y T+I +C+ G A+ + C
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 352 SMKKNWVPSVDTISALLEGL 371
S+ K P + T + ++ GL
Sbjct: 462 SL-KGLKPDIVTYTTMMSGL 480
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 96/186 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I + C+ ++ A+ E+++ G++P+V+TYT L++ +R L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ K PN+ T++ + V + +A +L M R I+PD VTY+ ++ G C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A +++ M+ + + + Y T+I+ C+ + ++ ++ V + T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 365 SALLEG 370
+ L++G
Sbjct: 369 NTLIQG 374
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 82/156 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+N +I FC+ ++ + EM + G+ + +TY TLI F++ + +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P++ T+N+ + L + +A + MQ+ ++ D VTY VI+G C++
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ A ++ ++ + L P+ Y TM+ LC +G
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA ++ M F +M G + N ++ ++ D+ Q F ++ + F I
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISP 398
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI+++NI++ C+ G L+KA ++ +MQK + D++TYTT+I K + E W
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---W 455
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+L C +L G++PD VTY ++ G C
Sbjct: 456 SLF----CSLSLK----------------------------GLKPDIVTYTTMMSGLCTK 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G L + +Y+ M LM N +GD L+ + K + + PS+
Sbjct: 484 GLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSL 532
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 61/138 (44%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FP++ FN + +V ++ L M+ GI D T+N+VI FC + +A
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ ML P+R ++++ C+ + A + ++ + P + +A+++ L
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 373 KNNQPCKANTIMALVQRR 390
K + A ++R+
Sbjct: 202 KTKRVNDAFDFFKEIERK 219
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +SF ++ + MG +++A+ VM EM PD I+YT I A Y R E ++
Sbjct: 247 DTYSF--IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVF 304
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KGC P++ T+ + I + + A ++ LM + ++P+ Y +++ GF +S
Sbjct: 305 ETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKS 364
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM--KKNWVPSVD 362
L+ A ++Y +L ++P+ Y T+I+ LC+ + A + ++ K+ PS+
Sbjct: 365 SRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIV 424
Query: 363 TISALLEGLKKNNQPCKANTIMA 385
T S ++ GL K +A ++A
Sbjct: 425 TYSMIIHGLGKVGMEERAFDLLA 447
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 2/193 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I FC+ G + A V+ M K VKP+ YT ++ F K +R E L+
Sbjct: 315 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 374
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG--IEPDEVTYNLVIKGFC 302
++ G P+ T+N I L ++ +A +L+ MQR +EP VTY+++I G
Sbjct: 375 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 434
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G + A + + M+ ++P+ Y ++I L G + A + ++ +K P
Sbjct: 435 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 494
Query: 363 TISALLEGLKKNN 375
T L++ L +++
Sbjct: 495 TYGTLVQILCRSD 507
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 151/350 (43%), Gaps = 15/350 (4%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLA---GARRFDYIEHLLEHQK 107
L L A RD +K F + + D+V+ A G + + LE+ +
Sbjct: 71 LSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYE 130
Query: 108 SLPQGRREGFIMRIMMLYG---KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
+ + E ++ +L KA ++ A D F +M G K + + ++ + L+++
Sbjct: 131 KMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAG 190
Query: 165 DL----KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD 220
+ K + + P + ++ ++ C+ G + +A + EM++ ++P
Sbjct: 191 RVDEARKLVDLMIARGPPPTAV-----AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPR 245
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
V TY+ +++ + + E + M + C P+ ++ + I+ L + R +A K+
Sbjct: 246 VDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 305
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
M G +PD TY ++I FC+ G + A V M + PNR IY ++ +
Sbjct: 306 TMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 365
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
A + + +K +PS T + ++ L K + +A ++ +QRR
Sbjct: 366 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 42/228 (18%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-------------------------- 218
++ SFNI+++ F + ++ EM+ G+
Sbjct: 28 NVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYF 87
Query: 219 ----------------PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
PD +TYT ++ +K + G + MV C P L T+ V
Sbjct: 88 NSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVL 147
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L + +A + M R G +PD + Y+ +I G ++G +D A+K+ M+ R
Sbjct: 148 VDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGP 207
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
P Y +++ LC+ G A ++ ++ P VDT S ++ G
Sbjct: 208 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTG 255
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQ--KLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N VI A C++ +D+A ++ EMQ K ++P ++TY+ +I K E L
Sbjct: 388 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLA 447
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P+ T+ IQ L + +A +L+ M + GI PD+ TY +++ CRS
Sbjct: 448 EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS- 506
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+D A + M+ PN ++ +
Sbjct: 507 DVDAAWDLLQEMMRNGHTPNEFTFKAV 533
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR------- 270
+P+V ++ L+ F + E+ N L M +G N AT V + L +R
Sbjct: 26 EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85
Query: 271 ----RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
R+ +A +L ++ PD VTY ++ G ++G+ D + Y M+ + P
Sbjct: 86 YFNSRTEEACRLFEAIE----APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTL 141
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
Y ++ LC+ A + ++ ++K P + S+L++GL K + +A ++ L
Sbjct: 142 LTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201
Query: 387 VQRRVP 392
+ R P
Sbjct: 202 MIARGP 207
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE-K 179
IM + K+ ++ A++ + + G + + N + L + + + L E+ K
Sbjct: 357 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 416
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ I +++++I ++G+ ++A+ ++ EM GV PD TYT+LI +
Sbjct: 417 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 476
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLV--NKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L M+ G FP+ T+ +Q L + +W L+ M R G P+E T+ V
Sbjct: 477 AMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWD---LLQEMMRNGHTPNEFTFKAV 533
Query: 298 IK 299
K
Sbjct: 534 EK 535
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I++++ + +I+I FC + +D + V + K G KPDV+ +TTLI + + E+
Sbjct: 71 IKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAA 130
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL M GC P++ T N ++ ++ + + K+ LM G++PD +Y++ I G+
Sbjct: 131 GLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGY 190
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ +D A +++ M R ++PN Y T+I LCQ A ++ + P +
Sbjct: 191 CKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDI 250
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRV 391
S LL+G K + + +QRR+
Sbjct: 251 LAYSTLLDGFCKQGNLDEMLVLFQEMQRRL 280
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 135/284 (47%), Gaps = 6/284 (2%)
Query: 107 KSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR 164
K+L +G + ++ ++ G + G + A +M L GC V + N+ ++
Sbjct: 100 KTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQG 159
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+ ++ + K ++ D++S++I I +C++ +D+A + EM GV P+ +TY
Sbjct: 160 KIDKVRKIFHLMVSK-GLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTY 218
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
TLI A + RP L+ M G P++ ++ + + + L MQR
Sbjct: 219 NTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
++PD V Y ++I G CRS + AK+V S ++ L P+ Y ++ LC+EG
Sbjct: 279 RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIE 338
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
A + + + +P + + LL+G ++N +T++ L+
Sbjct: 339 ALRLFRKMEEDGCMPGSCSYNVLLQGCLQHND---TSTVVQLIH 379
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 22/248 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K I AM+ F +M G + N +K L ++ + Q ++ +
Sbjct: 190 YCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCA-CGLSP 248
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +++ ++ FC+ G LD+ ++ EMQ+ VKPD++ YT +I+ + + + +
Sbjct: 249 DILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVL 308
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ ++ +G P++ T+ + L + +A +L M+ G P +YN++++G +
Sbjct: 309 SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQ- 367
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY--IMCKDSMKKNWVPSVD 362
H D + V +IH + G + A KD + N P++
Sbjct: 368 -HNDTSTVV-----------------QLIHEMADRGFYADAVTRTFLKDFLPGNDSPAIK 409
Query: 363 TISALLEG 370
+ L EG
Sbjct: 410 QLLGLFEG 417
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
N + + D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M
Sbjct: 145 FNILMHRFCKDGDIRJAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
GV+PDV TY+ LI+ K+++ + N L++ M+ KG PN F I R
Sbjct: 204 LASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRV 263
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A ++ M + PD +TYN +I G C+ G L A + M + L P++ Y T+
Sbjct: 264 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTL 323
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
I C+EGD + A+ K +++N +AL+ GL + A ++
Sbjct: 324 IDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKML 375
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRJAQSVFDAITKW 171
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 231
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ V + +I G C++G +D+A ++Y ML + L P+ Y T+I+
Sbjct: 232 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 292 LCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGD 332
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 144 FFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 201
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ D A + EM G+ P+ + +TTLI K+
Sbjct: 202 AMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNG 261
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYT 321
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + Y +I LC EG A M ++ +
Sbjct: 322 TLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSV 381
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 382 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 91 AIECYRLTXEHKFWVPFD--TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNIL 148
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F KD J +++ + G P++ ++N + + + +L M G+
Sbjct: 149 MHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 209 QPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAME 268
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A+ ++
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXK-GLKPDK 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + + D + YT LIS + R +
Sbjct: 318 ITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLRE 377
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I C+ G + +A ++ EM + GV PDV TYT ++ + + + + L+
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +GC N +N I L +A KL+ M G EPD +TYN ++ G CR
Sbjct: 69 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRM 128
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK--DSMKKNWVPSVD 362
G + AK+ + +M R P+ Y ++ L +EG A+ + K D + P +
Sbjct: 129 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI 188
Query: 363 TISALLEGL 371
T + L++G
Sbjct: 189 TYNTLIDGF 197
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ N VI C+ +D A+ V+ EM K+G PDV+TY L+ K N + + L+
Sbjct: 291 DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 350
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV GC P++ +++V + L + A L M + PD VT+N+++ G C++
Sbjct: 351 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 410
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD AK + M ++P+ T++H LC++ + A + + ++K V V
Sbjct: 411 GKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPH 470
Query: 365 SALLEGLKKNNQPCKA 380
+ +L GL + + +A
Sbjct: 471 NIVLAGLCREGKLAQA 486
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+AG + A + F+ M GC + NA + L + +++ L E+ K + + D
Sbjct: 57 RAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY-EPDN 115
Query: 187 FSFNIVIKAFCEMG--------------------------ILDKAY-----------LVM 209
++N ++ C MG +LD Y
Sbjct: 116 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKT 175
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
++M V PD+ITY TLI F + + + L+ ++ KG P+ T+N + L K
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 235
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A ++ M G P+ TY++V+ G CR G++ ++Y M +R P+ +
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLC 295
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+I LC+ + A+ + ++ K VP V T + LL+GL K N KA+ + +
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
NA + +L +++ + L E+ K D+ ++NI++ C+ ++DKA+ + M
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMS-KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
G PD+++Y+ +++ K N+ L++ M+ + P++ TFN+ + L +
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A L+ +M + PD VT ++ G CR D A +++ M+ + + + + ++
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474
Query: 334 HYLCQEGDFNLAYIMCKDSMKKN--WVPSVDTISALLEGL 371
LC+EG A + K +K + + P V T + L+ L
Sbjct: 475 AGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 148/350 (42%), Gaps = 42/350 (12%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N A+ ++ L + LLE S +G I +L G + G + A
Sbjct: 79 NTVAYNALINGLCKDENIERAYKLLEEMAS--KGYEPDNITYNTILSGLCRMGKVSEAKQ 136
Query: 137 TFYDMHLYGCKRTVKSLNAALKVL-TESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIK 194
F M G V + N L L E + +A F M++ ++ + D+ ++N +I
Sbjct: 137 FFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR-KVAPDLITYNTLID 195
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
FC + D+A + ++ G PD +TY +++ + + + ++ MV GC P
Sbjct: 196 GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP 255
Query: 255 NLATF-----------------------------------NVRIQHLVNKRRSWQANKLM 279
N AT+ N I L ++ A+K++
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVL 315
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M + G PD VTYN+++ G C++ +D A +++S M+ P+ Y +++ LC+
Sbjct: 316 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ A ++ +++ VP V T + L++GL K + +A ++ ++
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 7/258 (2%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLY 144
+ L A++ D +LE + G + ++L G K ++ A + F M
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKI--GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC + S + L L ++ + + + E+ + D+ +FNI++ C+ G LD+
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP-DVVTFNILMDGLCKAGKLDE 415
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A ++ M + V PD +T TTL+ +D R + L+ MV KG ++ N+ +
Sbjct: 416 AKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475
Query: 265 HLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
L + + QA M + E PD VTY ++ +G +D A + M G
Sbjct: 476 GLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGC 535
Query: 323 MPNRKIYQTMIHYLCQEG 340
P+ Y T+++ L ++G
Sbjct: 536 APDYVAYNTLMNGLRKQG 553
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 95/193 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++IV+ C +G + + + EM + PDV+ +I K + + + + M
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G P++ T+N+ + L +A++L M G PD V+Y++V+ G C++ +
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A+ ++ M+ R+L+P+ + ++ LC+ G + A + + N +P T + L
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL 438
Query: 368 LEGLKKNNQPCKA 380
+ GL ++ + +A
Sbjct: 439 MHGLCRDKRTDEA 451
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G +PDV+TY+T+IS K + + M KG P++AT+ + + L +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A++L M G + V YN +I G C+ +++ A K+ M + P+ Y T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI---MALVQ 388
++ LC+ G + A + + P V + LL+ L K + +A + M +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 389 RRV 391
R+V
Sbjct: 181 RKV 183
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG--VKPDVITYTTLISAFYKDNRPEIGNG 242
D+ NIV+ C G L +A L M K PDV+TYTTL++A + R +
Sbjct: 466 DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVD 525
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ M GC P+ +N + L + R QA++L M+ G D
Sbjct: 526 YFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
++ F Y K +V S N L L + + ++ E+ + I ++ +FN VI
Sbjct: 179 GLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRR-KISPNLITFNTVI 237
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-----NGLWNLMV 248
C++G L+KA V+ +M+ G P+V+TY TLI + K R +G + + MV
Sbjct: 238 NGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR--VGKMYKADAILKEMV 295
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN TFNV I A K+ MQ G++P VTYN ++ G C G L+
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AK + ML L PN Y +I+ C++ A + + K+ P+V T + LL
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415
Query: 369 EGLKK 373
G K
Sbjct: 416 HGYCK 420
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+ F +M G K TV + N+ + L L + L E+ +++ ++ ++N +I
Sbjct: 322 ALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS-NLKPNVITYNALI 380
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+C+ +L++A + + K G+ P+VIT+ TL+ + K + E L +M+ KG
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN +T+N I + + + L+ MQ G++ D VTYN++I +C A ++
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
ML + L P+ Y +++ C EG+ A + K K+ +V T + L++G +
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560
Query: 374 NNQPCKANTIM 384
+ AN ++
Sbjct: 561 KGKLEDANGLL 571
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAY---LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ ++N +I +C+MG + K Y ++ EM + V P+ +T+ LI F KD
Sbjct: 264 NVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAAL 323
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M +G P + T+N + L N+ + +A L+ M ++P+ +TYN +I G+
Sbjct: 324 KVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGY 383
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ L+ A++++ + + L PN + T++H C+ G A+++ K ++K ++P+
Sbjct: 384 CKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNA 443
Query: 362 DTISALLEGL 371
T + L+ G
Sbjct: 444 STYNCLIVGF 453
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 92/185 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +FN ++ +C+ G +++A+L+ M + G P+ TY LI F ++ + E L
Sbjct: 407 NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLL 466
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M C+G + T+N+ I K+ +A +L+ M G++P +TYN+++ G+C
Sbjct: 467 NEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCME 526
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A + M N Y +I C++G A + + ++K +P+ T
Sbjct: 527 GNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Query: 365 SALLE 369
+ E
Sbjct: 587 EIIKE 591
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 114/218 (52%), Gaps = 5/218 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME--VPEKFHI 182
Y K +++ A + F ++ G V + N L + ++ +AFL++ + EK +
Sbjct: 383 YCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME--EAFLLQKVMLEKGFL 440
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ ++N +I FC G +++ ++ EMQ GVK D +TY LISA+ + P+
Sbjct: 441 P-NASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + M+ KG P+ T+N+ + + A L M++ G + VTYN++I+G+C
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYC 559
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
R G L+ A + + ML + L+PNR Y+ + + ++G
Sbjct: 560 RKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D ++NI+I A+CE KA ++ EM G+KP +TY L++ + +
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M +G + N+ T+NV IQ K + AN L+ M G+ P+ TY ++ +
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEM 593
Query: 302 CRSGHL-DMAKKVYSA 316
G L D+ +Y A
Sbjct: 594 MEKGFLPDIEGHLYHA 609
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F FN V+ C G++D+A+ + + G PDVI+Y+ L+ + E G L
Sbjct: 59 DMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLM 118
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ KGC PN+ T+++ I L + +A L+ +M+ G+ PD +Y+ +I FC+
Sbjct: 119 SDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKE 178
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D+A + +M+ +P+ Y T++ LC+ G + A + + + P+V +
Sbjct: 179 SRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSY 238
Query: 365 SALLEGLKKNNQPCKA 380
+ L L + +A
Sbjct: 239 NTLFSALWSSGHKIRA 254
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 96/189 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++I+I + C G +++A ++ M++ G+ PD +Y LI+AF K++R ++
Sbjct: 129 NVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFL 188
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ GC P++ +N + L ++ +A K+ + G P+ +YN + S
Sbjct: 189 ESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSS 248
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
GH A + ML + + P+ Y ++I LC++ + A + D + PSV +
Sbjct: 249 GHKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISY 308
Query: 365 SALLEGLKK 373
+ +L GL K
Sbjct: 309 NIVLLGLSK 317
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%)
Query: 221 VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG 280
++TYT LI A + L + M+ G P++ FN + + + +A + +
Sbjct: 25 LVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIR 84
Query: 281 LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G PD ++Y+++++G + +K+ S ML + PN Y +I LC++G
Sbjct: 85 YISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDG 144
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
A + K ++ P + L+ K ++
Sbjct: 145 KVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESR 180
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
+L T+ + I+ + K KL+ M G+ PD +N V+ G CR G +D A +
Sbjct: 24 SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
+ + P+ Y ++ L + + + D + K P+V T S L+ L ++
Sbjct: 84 RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143
Query: 375 NQPCKANTIMALVQRR 390
+ +A +++ +++ +
Sbjct: 144 GKVEEAVSLLKVMKEQ 159
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 7/161 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ Y+++ ++ R D LE S LP I+ + GKA A+
Sbjct: 164 DAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKA---DEAL 220
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
F + GC V S N L S ++E+ K I D ++N +I
Sbjct: 221 KIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSK-DIDPDEITYNSLISC 279
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
C ++D+A ++V+M+ +P VI+Y ++ K +R
Sbjct: 280 LCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHR 320
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H+ F +N++I +C G + + L++ EM+ G P ++TY +LI+ K E
Sbjct: 1181 HVVF----YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M +G PN+ +N I L R + QA ++ M G +PD +T+N +I G
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C GH+ A+ + R L PN+ Y +IH C G+ +A + + M + P
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356
Query: 361 VDTISALLEGL 371
V T AL+ GL
Sbjct: 1357 VVTFGALIHGL 1367
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +N++I C+ +L A ++ EM + V+PD Y TLI F + ++
Sbjct: 1391 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1450
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P++ + N I+ +A M M++ G PDE TY VI G+ +
Sbjct: 1451 EFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1510
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L+ A + M+ R+ PN Y ++I+ C+ GD + A + + + P+V T
Sbjct: 1511 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTY 1570
Query: 365 SALLEGLKKNNQPCKAN 381
+ L+ L K ++ +A
Sbjct: 1571 TILIGSLFKKDKVLRAG 1587
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ +I + G L+K + +EM+K G P+V Y ++I A K +
Sbjct: 1217 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILK 1276
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M GC P++ TFN I L ++ +A + R + P++++Y +I GFC G
Sbjct: 1277 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1336
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L +A + M+GR P+ + +IH L G + A I+ + ++ P V+ +
Sbjct: 1337 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1396
Query: 366 ALLEGL-KKNNQPCKANTIMALVQRRV 391
L+ GL KK P N + ++++ V
Sbjct: 1397 VLISGLCKKRMLPAAKNILEEMLEKNV 1423
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 115/291 (39%), Gaps = 36/291 (12%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
AM M GC + + N + L ++ + FL E + + + S+ +
Sbjct: 1270 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRR-ELNPNQLSYTPL 1328
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I FC G L A ++VEM G PDV+T+ LI + + M +
Sbjct: 1329 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1388
Query: 253 FPNLATFNVRIQHLVNKR--------------------------------RS---WQANK 277
FP++ +NV I L KR RS A K
Sbjct: 1389 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1448
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ M+ GI PD V+ N +IKG+C+ G + A S M +P+ Y T+I
Sbjct: 1449 IFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYA 1508
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
++G+ N A D +K+ P+V T S+L+ G K A + A +Q
Sbjct: 1509 KQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQ 1559
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 5/247 (2%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF--HIQ 183
GK G ++ F +M G V+ N+ + L + R A QA ++ + + F
Sbjct: 1228 GKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCR--SATQAMVI-LKQMFASGCD 1284
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI +FN +I C G + KA + E + + P+ ++YT LI F + + L
Sbjct: 1285 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1344
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P++ TF I LV + +A + M + PD YN++I G C+
Sbjct: 1345 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1404
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
L AK + ML + + P+ +Y T+I + + A + + K P + +
Sbjct: 1405 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVS 1464
Query: 364 ISALLEG 370
+A+++G
Sbjct: 1465 CNAMIKG 1471
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + + +M G T+ + + + L + DL+ I + +E+ K
Sbjct: 1192 YCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM-RKRGFSP 1250
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N VI A C+ +A +++ +M G PD+IT+ TLI+ +
Sbjct: 1251 NVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1310
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + PN ++ I + A+ L+ M G PD VT+ +I G +
Sbjct: 1311 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1370
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V M R++ P+ IY +I LC++ A + ++ ++KN P
Sbjct: 1371 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1430
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L++G ++ A I ++ +
Sbjct: 1431 ATLIDGFIRSENLGDARKIFEFMEHK 1456
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 101/265 (38%), Gaps = 2/265 (0%)
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
DT M L G T L A + ++ L V E++ ++ N ++K
Sbjct: 1062 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKL 1121
Query: 196 FCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
E D A + EM D + L+ + R E G L GC P+
Sbjct: 1122 LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPH 1181
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+ +NV I + + L+G M+ G P VTY +I + G L+ ++
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1241
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M R PN +IY ++I LC+ A ++ K P + T + L+ GL
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1301
Query: 376 QPCKANTIMALVQRRVPHFSSNQLS 400
KA + RR + NQLS
Sbjct: 1302 HVRKAEHFLREAIRR--ELNPNQLS 1324
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 6/279 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLN 154
FD ++ L+ + ++ Y AGM+ A + YG V N
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116
Query: 155 AALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
LK+L E R + E+ K D +S ++++ C +++ ++
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGK-DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1175
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRS 272
G P V+ Y LI + + R ++G GL L M KG P L T+ I L K
Sbjct: 1176 AGCIPHVVFYNVLIDGYCR--RGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDL 1233
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ L M++ G P+ YN VI C+ A + M P+ + T+
Sbjct: 1234 EKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTL 1293
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
I LC EG A ++++++ P+ + + L+ G
Sbjct: 1294 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1332
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 15/215 (6%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++ VI + + G L+ A + +M K KP+V+TY++LI+ + K + GL+
Sbjct: 1496 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLF 1555
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF--- 301
M + PN+ T+ + I L K + +A M P++VT + ++ G
Sbjct: 1556 ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 1615
Query: 302 ---------CRSGHL---DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
C + + D V+ ++ P Y +I LC+ A
Sbjct: 1616 TPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFK 1675
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
KK +VP+ T +LL G + TI+
Sbjct: 1676 NRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTIL 1710
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ V+ C+ G++ +A + +EM G+KP+++TYT LI R + L
Sbjct: 215 NVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLL 274
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+L + N+ + L + + QA ++G M G PD TYN +I +C
Sbjct: 275 DEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQ 334
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A +V+ M+ R +P+ Y ++IH C+ + N A + + +K + P V T
Sbjct: 335 NQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTW 394
Query: 365 SALLEGLKKNNQPCKA 380
+ L+ G + +P A
Sbjct: 395 TTLIGGFCQVGRPLAA 410
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++ +I +C++ ++KA ++ EM K+G PDV+T+TTLI F + RP L+
Sbjct: 355 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G PNL T + + L + +A L M++ ++ + V Y++++ G C +
Sbjct: 415 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 474
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A +++S + + L N Y MI+ ++G + A + + + +P T
Sbjct: 475 GKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTY 534
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+ ++GL + A +I L R FS
Sbjct: 535 NVFVQGLVAEREI--ARSIKYLTMMRDKGFS 563
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 3/277 (1%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
GK I A++ F+ M +V L + + + + + E+ I+ D
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
F N+VI + C + ++ + V+ M KLG++P V+T+T LI+ L +
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ G ++ T+ V I L ++ +A + M+ P+ V Y+ V+ G C+ G
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A + M G+ + PN Y +I LC G + A + + MK +P + +++
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLN 290
Query: 366 ALLEGLKKNNQPCKANTI---MALVQRRVPHFSSNQL 399
L++ L K + +A ++ M LV F+ N L
Sbjct: 291 ILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSL 327
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G++ A+ +M G K + + ++ L K + L E+ K + D+
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEM-MKMGVMPDL 286
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S NI++ C+ G + +A V+ M +G PDV TY +LI + N+ + ++ L
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC P++ + I + +A L+ M + G PD VT+ +I GFC+ G
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
AK+++ M +PN + ++ LC+ + A + K N ++ S
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466
Query: 367 LLEGL 371
+L+G+
Sbjct: 467 ILDGM 471
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL---KAIQAFLM---EVPEKFHI 182
G K A +M G ++SLN + VL + + K++ F++ EVP
Sbjct: 265 GRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVP----- 319
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
D+F++N +I +C +D+A V M G PD++ YT+LI + K
Sbjct: 320 --DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMH 377
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L + M+ G P++ T+ I R A +L M ++G P+ T +++ G C
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+S L A ++ AM L N IY ++ +C G N A
Sbjct: 438 KSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTA 480
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A + F +MH YG +++ L L +S+ L + L EK ++ +I ++I++
Sbjct: 410 AKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALS-LFHAMEKSNLDLNIVIYSIIL 468
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
C G L+ A + + G++ +V YT +I+ F K + L + M GC
Sbjct: 469 DGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCM 528
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
P+ T+NV +Q LV +R ++ K + +M+ G D T ++I
Sbjct: 529 PDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 8/304 (2%)
Query: 85 DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF-------IMRIMMLYGKAGMIKHAMDT 137
DT + +A R + +E E K + + R + ++ + G A M+ A+
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
FY + C+ T ++ N+ + +L + E+ + H D +++ +I AFC
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFC 241
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
++G D A ++ EM++ G++P YT LI+ F+K + L+ M + C P++
Sbjct: 242 KLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVF 301
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ I+ L R +A MQR G PD V N +I ++G LD A K++ M
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEM 361
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNNQ 376
R +P+ Y T+I L + + MK++ + PS T S L++G K N+
Sbjct: 362 GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 421
Query: 377 PCKA 380
KA
Sbjct: 422 MEKA 425
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 136/335 (40%), Gaps = 49/335 (14%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFY 139
+ + + + L A R D H ++ R + +M M+ + GKAG + AM F
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFF-YEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQ 359
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH------IQFDIFSFNIVI 193
+M C +V + N +K L ES+ + EVP F I F+++I+I
Sbjct: 360 EMGTLRCIPSVVTYNTIIKALFESKSRAS------EVPSWFERMKESGISPSSFTYSILI 413
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW--------- 244
FC+ ++KA +++ EM + G P Y +LI A K R ++ L+
Sbjct: 414 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473
Query: 245 --------------------------NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
+ M GC P++ +N + L +A
Sbjct: 474 SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 533
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M MQ G PD +YN+++ G ++G A ++ S M + P+ Y T++ L
Sbjct: 534 MRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSH 593
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
G F A + ++ + + T S++LE + K
Sbjct: 594 AGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 39/310 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G A +M G + T K + + + D+ + E+ ++ +
Sbjct: 240 FCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQY-CRP 298
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++ +I+ + G +D+AY EMQ+ G +PD + +I+ K R + L+
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLF 358
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C P++ T+N I+ L +K R+ + M+ GI P TY+++I GFC+
Sbjct: 359 QEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 418
Query: 304 SGHLDMAKKVYSAMLGRRLMP-----------------------------------NRKI 328
+ ++ A + M + P + ++
Sbjct: 419 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 478
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI +L + G + A M + K P V +AL+ GL + +A + M +Q
Sbjct: 479 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 538
Query: 389 RR--VPHFSS 396
+P +S
Sbjct: 539 EHGCIPDINS 548
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 38/226 (16%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFYD 140
A+ + L A+R+D L + K G + +M+ + GKAG + A++ F +
Sbjct: 443 AYCSLIDALGKAKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRLDDAINMFDE 501
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M+ GC P D++++N ++ G
Sbjct: 502 MNKLGC-----------------------------AP-------DVYAYNALMSGLARTG 525
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+LD+A M MQ+ G PD+ +Y +++ K P + + M P++ ++N
Sbjct: 526 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYN 585
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ L + +A KLM M G E D +TY+ +++ + H
Sbjct: 586 TVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M + GM+ A+ T M +GC + S N L L ++ L + +
Sbjct: 517 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS- 575
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ S+N V+ A G+ ++A +M EM LG + D+ITY++++ A K + G
Sbjct: 576 TVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEYTG 635
Query: 241 NG 242
G
Sbjct: 636 QG 637
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 20/309 (6%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
V L+ AR +E L K+ ++ Y +AG ++ A + G
Sbjct: 208 VDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGV 267
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+ ++ +K + ++A + L ++ + + + FN +I +C G++D A
Sbjct: 268 EPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQ-GVGLNQIIFNTMIDGYCRKGMVDDAL 326
Query: 207 LVMVEMQKLGVK-------------------PDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ M+K+GV+ P+ +TYTTLIS KD L+ M
Sbjct: 327 KIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 386
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P++ T++V I K R +A + M++ G PD TY ++ G C +G +
Sbjct: 387 AEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 446
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D+A K++ M R PN Y +I L +EG A+ + D +K +P SAL
Sbjct: 447 DVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSAL 506
Query: 368 LEGLKKNNQ 376
+ L +N+
Sbjct: 507 VGSLHTDNR 515
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 20/269 (7%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G + A DM +G N+ L +D +Q L E+ E I+ +
Sbjct: 143 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL-EIMENEGIEATV 201
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I++ + + K + EM+ V DV YT +I+A+ + + +
Sbjct: 202 GTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 261
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
V G PN T+ V I+ + A L+ MQ G+ +++ +N +I G+CR G
Sbjct: 262 CVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGM 321
Query: 307 LDMAKKVYSAM--LGRRL-----------------MPNRKIYQTMIHYLCQEGDFNLAYI 347
+D A K+ +AM +G L +PN Y T+I C++GD A
Sbjct: 322 VDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARR 381
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ ++ +K PSV T S ++ G K +
Sbjct: 382 LFREMAEKGATPSVLTYSVMIHGYAKKGR 410
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+ ++V+ C+ G +D A ++ +M + GV + + Y +L+ + + + +
Sbjct: 132 FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 191
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G + T+ + + L R + L M+ + D Y VI +CR+G+
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKD 351
+ A KV +G + PN + Y +I C+ G A ++ D
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLAD 296
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ I+I F + GI+ +A+ + EM + G +P V+TYTTLI A+ K + + N L+
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582
Query: 245 NLMVCKGCFPNLATFNVRI----------------------------------------- 263
LM+ KGCFPN+ T+ I
Sbjct: 583 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 642
Query: 264 ----------QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
L + A L+ M G EP+ + Y+ +I GFC++ LD A++V
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ R PN Y ++I L ++ +L + ++ + P++ + +++GL K
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 374 NNQPCKANTIMALVQRR 390
+ +A +M +++ +
Sbjct: 763 VAKTDEAYKLMLMMEEK 779
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 98/185 (52%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I FC+ LD+A V +M + G P+V TY++LI +KD R ++ + + M+
Sbjct: 683 YDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ + I L ++ +A KLM +M+ G +P+ VTY +I GF ++G +D
Sbjct: 743 ENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVD 802
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+++ M + PN Y +I++ C G + AY + ++ + W V + ++
Sbjct: 803 KCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI 862
Query: 369 EGLKK 373
EG K+
Sbjct: 863 EGYKR 867
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 17/265 (6%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG+IK A + +M GC+ TV + + +++ + ++ L E+
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV-SVANELFELMIAKGCFP 592
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQ----------------KLGVKPDVITYTTLI 228
++ ++ +I +C+ G ++KA + M+ + KP+V+TY L+
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
K ++ + L M GC PN ++ I + +A ++ M G
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYN 712
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ TY+ +I + LD+ KV S ML PN IY MI L + + AY +
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Query: 349 CKDSMKKNWVPSVDTISALLEGLKK 373
+K P+V T +A+++G K
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGFGK 797
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA + A + F+ M G V + ++ + L + + L + L ++ E
Sbjct: 690 FCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN-SCAP 748
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I + +I ++ D+AY +M+ M++ G KP+V+TYT +I F K + + L+
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL-------------------------- 278
M KGC PN T+ V I H +A L
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868
Query: 279 ----MGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMA----KKVYSAMLGRRLMPNRK 327
+GL++ G P + Y ++I F ++G L++A K+V SA + + +
Sbjct: 869 FILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMS--MTAKKN 926
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+Y ++I+ + A+ + D ++ +P + T LL GL
Sbjct: 927 LYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGL 970
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G+ A++ + +G K T + NA ++V + L Q E+ E + D
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE-LGLSMDE 276
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F+ +A C++G +A L ++E + P+ I Y +IS + + E N
Sbjct: 277 FTLGFFAQALCKVGKWREA-LSLIEKEDF--VPNTILYNKMISGLCEASFFEEAMDFLNR 333
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PN+ T+ + + +NK++ + +++ +M G P +N ++ +C+S
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDD 393
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
A K+ M P +Y +I +C G+
Sbjct: 394 FSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL-- 202
GC + N+ + +S D L ++ EK + +NI+I + C G L
Sbjct: 373 GCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPG 431
Query: 203 -------DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+KAY M+ + K +V+++ + F + E + + M+ G P+
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPD 488
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+T++ I L N R A L M+ G+ PD TY ++I F ++G + A
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M+ P Y T+IH + ++A + + + K P+V T +AL++G K+
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608
Query: 376 QPCKANTIMA 385
KA I A
Sbjct: 609 NIEKACQIYA 618
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 9/268 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-MEVPEKFHIQFD 185
+A + AMD M C V++ L + L + L M + E + +
Sbjct: 320 EASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYT 379
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------EI 239
IF N ++ A+C+ AY ++ +M+K KP + Y LI + E+
Sbjct: 380 IF--NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFEL 437
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+N M+ G N + L + +A K++ M G PD TY+ VI
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C + ++ A ++ M G ++P+ Y +I + G A+ + ++ P
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALV 387
+V T + L+ K + AN + L+
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELM 585
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 17/225 (7%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW--- 244
++N +++ F LD A LV EM +LG+ D T A K G W
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK-------VGKWREA 295
Query: 245 -NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+L+ + PN +N I L +A + M+ P+ TY +++ G
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
L K++ S M+ P+ I+ +++H C+ DF+ AY + K K P
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
+ L+ + C + V + + N++ + ++L+K
Sbjct: 416 YNILIGSI------CSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 137/293 (46%), Gaps = 9/293 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFY-D 140
A E V RLA A D ++ L+ + EG ++ + + +AG A+ TFY
Sbjct: 57 AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116
Query: 141 MHLYGCKRTVKS--LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+H GC R + N + L + A+ + + K + ++F++N++++A C+
Sbjct: 117 VHDLGCARPTEPRLYNHLIDALLRENMVGAV-VLVYDNMRKDGVHPNVFTYNLLVRALCQ 175
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+ A ++ EM + G PD +TY T++S K +R + + M P A+
Sbjct: 176 NNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAAS 230
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
+N + L + R + ++ M G++P+ +TY ++ FC++G L MA + + M+
Sbjct: 231 YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMV 290
Query: 319 GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN + ++ L +G + A M + + + W PS + + L+ GL
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 343
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+N ++ A C + + + V+ +M G++P+VITYTT++ AF K + + M
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 289
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V GC PN+ TF ++ L + R A + M G P V+YN++I+G C G L
Sbjct: 290 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 349
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
A + ++M PN + Y T+I + GD A + D + P+V
Sbjct: 350 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 403
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++ ++ ++ AFC+ G L A ++ M G P+V+T+T L+ + D R
Sbjct: 259 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 318
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+W MV +G P+ ++N+ I+ L + A+ ++ M++ G P+ TY+ +I GF
Sbjct: 319 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 378
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++G L A +++ M PN +Y M+ C++ FN A + + +N P+
Sbjct: 379 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 438
Query: 362 DTISALLEGL 371
T + L+ L
Sbjct: 439 VTFNTLIRSL 448
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+D + M G + S N ++ L DLK + L + E+ ++ +
Sbjct: 312 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM-EQHGCFPNVRT 370
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I F + G L A + +M + G KP+V+ YT ++ F K L + M+
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 430
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ C PN TFN I+ L + RR +A + M+R G P+ TYN +I G R G+
Sbjct: 431 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 490
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + M + + Y T++ LCQ A + + + P+ T SA++
Sbjct: 491 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 550
Query: 369 EGLKKNNQ 376
K +
Sbjct: 551 HAYCKEGE 558
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTV----KSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+ KAG + A+ + DM GCK V ++ K L ++ I L+E
Sbjct: 378 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE----- 432
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + +FN +I++ C+ + +A V EM++ G P+ TY LI +++
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M G +L T+N + L R S +A +G M GI+P+ T++ +I
Sbjct: 493 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 552
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C+ G + MA + AM N +Y ++ LC + A + + P+
Sbjct: 553 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPN 612
Query: 361 VDTISALLEGLKKN 374
T + L+ G+ +N
Sbjct: 613 TVTWNVLVRGVFRN 626
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 13/246 (5%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G ++ AA++ L + D+ +Q L E+ + + + + AF G D+
Sbjct: 50 GTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLR-GVPCTEGALVAAVGAFARAGAPDR 108
Query: 205 AYLVMVE-MQKLG----VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
A + LG +P + Y LI A ++N +++ M G PN+ T+
Sbjct: 109 ALKTFYRAVHDLGCARPTEPRL--YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTY 166
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N+ ++ L R A K++ M R G PD+VTY ++ C+ LD A +V +AM
Sbjct: 167 NLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-- 224
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
P Y ++ LC+E + + D + + P+V T + +++ K +
Sbjct: 225 ---PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 281
Query: 380 ANTIMA 385
A I+A
Sbjct: 282 ACAILA 287
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + +M + GC+ V + + + L+ + L E+ K + +
Sbjct: 26 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNA 84
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N +I A C+ + A + +M G KPD+ T+ +LI K N+ E GL+
Sbjct: 85 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 144
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G N T+N I + + +A KL+ M G D++TYN +IK CR+G+
Sbjct: 145 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 204
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ ++ M+ + L PN +I+ LC+ G+ A +D + + P + T ++
Sbjct: 205 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 264
Query: 367 LLEGLKKNNQPCKA 380
L+ GL K + +A
Sbjct: 265 LINGLCKTGRAQEA 278
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAAL----KVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
++ A++ F DM GCK + + N+ + KV L Q L+E + +
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE-----GVIANT 154
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I AF G + +A ++ +M G D ITY LI A + E G L+
Sbjct: 155 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 214
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG PN + N+ I L A + + M G+ PD VTYN +I G C++G
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 274
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A ++ + + P+ Y T+I + C+EG F+ A+++ + ++P+
Sbjct: 275 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 328
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DIF++N +I C+ G L A +M EMQ G +P+VITYT LI F K+ R E +
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG N +N I L + A + G M G +PD T+N +I G C+
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A +Y ML ++ N Y T+IH + G A + D + + T
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192
Query: 365 SALLEGLKKNNQPCKANTI 383
+ L++ L C+A I
Sbjct: 193 NGLIKAL------CRAGNI 205
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D ++N +IKA C G ++K + +M G+ P+ I+ LI+ + +
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G P++ T+N I L R+ +A L +Q GI PD +TYN +I C+
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 306
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G D A + S + +PN + ++ +EGD
Sbjct: 307 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC P++ T+N I L K A +LM MQ G EP+ +TY ++I FC+ G
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A+ V M G+ L N Y +I LC++ A M D K P + T ++
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 367 LLEGLKKNNQ 376
L+ GL K N+
Sbjct: 125 LIFGLCKVNK 134
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M +G PD+ TY TLI K L N M KGC PN+ T+ + I + R
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A ++ M G+ + V YN +I C+ + A ++ M + P+ + +
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+I LC+ F A + +D + + + + T + L+
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 161
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 3/248 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG I+ A M GC+ + + N L ++ LK + + E+ IQ
Sbjct: 230 FCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRS-GIQL 288
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMV-EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D +S+N ++K C + D+ Y M+ EM+ G DV++Y+TLI F + + + L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGF-CDVVSYSTLIETFCRASNTKKAYKL 347
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG N+ TF I+ + + S A KL+ M G+ PD + Y ++ C+
Sbjct: 348 FEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG++D A +++ M+ + P+ Y ++I LC+ G A + +D K P T
Sbjct: 408 SGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467
Query: 364 ISALLEGL 371
++ GL
Sbjct: 468 FKFIIGGL 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 109 LPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
+ +GR + +++ G +AG + A++ + M G K+ A + L +R +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ E + ++ I +N +I FC+ G ++KA + M K+G +PD++TY
Sbjct: 201 DLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNV 260
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGC---------------------------------- 252
L++ +Y +N + G+ MV G
Sbjct: 261 LLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPR 320
Query: 253 -FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
F ++ +++ I+ + +A KL M++ GI + VT+ +IK F R G+ +AK
Sbjct: 321 GFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAK 380
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K+ M L P+R Y T++ +LC+ G+ + AY + D ++ P + ++L+ GL
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGL 440
Query: 372 KKNNQPCKA 380
++ + +A
Sbjct: 441 CRSGRVTEA 449
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ +I+ FC KAY + EM++ G+ +V+T+T+LI AF ++ + L
Sbjct: 324 DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLL 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P+ + + HL +A + M I PD ++YN +I G CRS
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A K++ M G+ P+ ++ +I L +E + AY + M K + D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 365 SALLEG 370
L++
Sbjct: 504 DTLIKA 509
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 22/315 (6%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI------MMLYGKAGMIKHA 134
+ + +S L ++F+ I+ LL ++L GFI I + L + + A
Sbjct: 80 FTYSRFISGLCKVKKFELIDALLRDMETL------GFIPDIWAFNIYLDLLCRENKVGFA 133
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIVI 193
+ TF+ M G + V S + L + + A++ + + + + D + ++
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI--RSGVSPDNKACAALV 191
Query: 194 KAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
C +D AY +V E++ VK ++ Y LIS F K R E L + M GC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGC 251
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+L T+NV + + + +A +M M R GI+ D +YN ++K CR H D +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPD---R 308
Query: 313 VYSAMLGR---RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
YS ML R + Y T+I C+ + AY + ++ +K V +V T ++L++
Sbjct: 309 CYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIK 368
Query: 370 GLKKNNQPCKANTIM 384
+ A ++
Sbjct: 369 AFLREGNSSVAKKLL 383
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V S + ++ + + K E+ +K I ++ +F +IKAF G A ++
Sbjct: 325 VVSYSTLIETFCRASNTKKAYKLFEEMRQK-GIVTNVVTFTSLIKAFLREGNSSVAKKLL 383
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M +LG+ PD I YTT++ K + G++N M+ P+ ++N I L
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R +A KL M+ PDE+T+ +I G R L A KV+ M+ + +R +
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 330 QTMIHYLCQ 338
T+I C
Sbjct: 504 DTLIKASCS 512
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 168 AIQAFLMEVPEKFHIQFDIFS--FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
A+Q F E H + +FS +N I + + A + +M +G TY+
Sbjct: 28 AVQVF----DEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYS 83
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
IS K + E+ + L M G P++ FN+ + L + + A + M +
Sbjct: 84 RFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQR 143
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G EPD V+Y ++I G R+G + A ++++AM+ + P+ K ++ LC +LA
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 346 YIMCKDSMKKNWVP-SVDTISALLEGLKKNNQPCKANTIMALVQR 389
Y M + +K V S+ +AL+ G K + KA + + + +
Sbjct: 204 YEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSK 248
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 15/315 (4%)
Query: 87 VSRLAGARRFDYI-------EHLLEHQKSLPQGR-REGFIMRIMML------YGKAGMIK 132
+ R+ AR+F I E LE + L + R +G I I+ Y K G ++
Sbjct: 178 LGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDME 237
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A F ++ L G TV++ A + + D KAI LME+ + + ++ +N +
Sbjct: 238 MANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR-GLTVNVQVYNTI 296
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I A + G + KA + M + G KPD++TY TLIS +D + + L + KG
Sbjct: 297 IDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGL 356
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN ++ I + +A+ + M G +PD VTY ++ G +G +D+A
Sbjct: 357 MPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALT 416
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ ML R + P+ IY ++ LC++ A ++ + + ++ +P + L++G
Sbjct: 417 IREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFI 476
Query: 373 KNNQPCKANTIMALV 387
+N +A + L
Sbjct: 477 RNGNLDEARKLFELT 491
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFD 185
K G I A++T M GCK + + N + RD K +A L+E + +
Sbjct: 302 KHGHIVKAVETIEGMIECGCKPDIVTYNTLIS--GSCRDGKVSEADQLLEQALGKGLMPN 359
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
FS+ +I A+C+ G D+A ++EM + G KPD++TY L+ ++ +
Sbjct: 360 KFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIRE 419
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G FP+ +N+ + L K + A L+ M + PD Y ++ GF R+G
Sbjct: 420 KMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNG 479
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTI 364
+LD A+K++ + + + P Y MI C+ G A + C + MKK + P T
Sbjct: 480 NLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDA-MACINRMKKRHLAPDEFTY 538
Query: 365 SALLEGLKKNN 375
S +++G K +
Sbjct: 539 STVIDGYVKQH 549
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 26/254 (10%)
Query: 154 NAALKVLTESRDLKAIQAFL--MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY-LVMV 210
++ LK+L SR ++ L M V E + + +IVI+A+ + G+++KA L
Sbjct: 98 SSLLKLLARSRVFSEMEVVLENMRVEEMSPTRE---AMSIVIQAYSDSGLVEKALELYYF 154
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV---CK----------------- 250
++ PDVI +L++ K R EI +MV CK
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQ 214
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC PN+ +N I K AN L ++ G P TY +I GFC+ G
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 274
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M R L N ++Y T+I + G A + ++ P + T + L+ G
Sbjct: 275 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 334
Query: 371 LKKNNQPCKANTIM 384
++ + +A+ ++
Sbjct: 335 SCRDGKVSEADQLL 348
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 4/276 (1%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
REG ++ + L + H + H+ K V A + L + + Q
Sbjct: 22 REGRVLEALALVDRMVEEGHQPNAMGQSHI---KADVVISTAIVDRLCKDGNHINAQNLF 78
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E+ EK I ++ ++N +I +FC G A ++ M + + PD++T++ LI+AF K
Sbjct: 79 TEMHEK-GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 137
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + ++ M+ FP T+N I + R A +++ M G PD VT
Sbjct: 138 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 197
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
++ +I G+C++ +D +++ M R ++ N Y T+IH CQ GD + A + + +
Sbjct: 198 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 257
Query: 354 KKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T +L GL + KA I+ +Q+
Sbjct: 258 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 293
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +A + F +MH G V + N + S L + EK I DI
Sbjct: 67 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK-QINPDI 125
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+ +I AF + + +A + EM + + P ITY ++I F K +R + + +
Sbjct: 126 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 185
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGC P++ TF+ I +R ++ M R GI + VTY +I GFC+ G
Sbjct: 186 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 245
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
LD A+ + + M+ + P+ + M+ LC + + A+ + +D K P
Sbjct: 246 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP 298
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 10/216 (4%)
Query: 185 DIFSFNIVIKAFCEMG-ILDKAYLV--MVE-------MQKLGVKPDVITYTTLISAFYKD 234
++ +FN ++ + C G +L+ LV MVE M + +K DV+ T ++ KD
Sbjct: 9 NVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKD 68
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
L+ M KG FPN+ T+N I + R A++L+ M I PD VT+
Sbjct: 69 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 128
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I F + + A+++Y ML + P Y +MI C++ + A M
Sbjct: 129 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 188
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
K P V T S L+ G K + I + RR
Sbjct: 189 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP----------DEVTYNL 296
MV GC PN+ TFN + L + R +A L+ M G +P D V
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ C+ G+ A+ +++ M + + PN Y MI C G ++ A + + ++K
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTI 383
P + T SAL+ K + +A I
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEI 147
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA + + M+ F +MH G + + + DL A Q L E+ +
Sbjct: 205 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAP 263
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
D +F+ ++ C L KA+ ++ ++QK V P +I + + +F
Sbjct: 264 DYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFFLFSLCSF 310
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L+ L + + K + F E+ E + ++ FNI++ FC+ G + A V + K
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPA-SLYFFNILMHRFCKDGDIRJAQSVFDAITKW 154
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G++P V++Y TL++ + + + G L + M+ G P++ T++V I + + A
Sbjct: 155 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 214
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
N+L M G+ P+ V + +I G C++G +D+A ++Y ML + L P+ Y T+I+
Sbjct: 215 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
LC++GD A+ + + K P T + L++G K
Sbjct: 275 LCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGD 315
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++ Q+ + + K+ ++ + S+N ++ + +G LD+ + + M GV+PDV TY
Sbjct: 140 DIRJAQS-VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTY 198
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
+ LI+ K+++ + N L++ M+ KG PN F I R A ++ M
Sbjct: 199 SVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLS 258
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
+ PD +TYN +I G C+ G L A + M + L P++ Y T+I C+EGD +
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDS 318
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A+ K +++N +AL+ GL + A ++
Sbjct: 319 AFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKML 358
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 127 FFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD--EGFRLKS 184
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ D A + EM G+ P+ + +TTLI K+
Sbjct: 185 AMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNG 244
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++PD++TY
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYT 304
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + Y +I LC EG A M ++ +
Sbjct: 305 TLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSV 364
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 365 GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI+ + + KF + FD + V++ ++ + E+ + G + + L
Sbjct: 74 AIECYRLTXEHKFWVPFD--TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNIL 131
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ F KD J +++ + G P++ ++N + + + +L M G+
Sbjct: 132 MHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGV 191
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD TY+++I G C+ D A +++ ML + L+PN + T+I C+ G +LA
Sbjct: 192 QPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAME 251
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ K + ++ P + T + L+ GL K +A+ ++
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 288
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXK-GLKPDK 300
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + + D + YT LIS + R +
Sbjct: 301 ITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLRE 360
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A F +M GC TV + N+ L + + +Q+ ++ + +
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP- 225
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF+FN ++ FC+MG + +A+ + +EM+ LG PDV++Y TLI +P L
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P++ ++N+ I A KL + + G+EPD +Y+ +I CR+
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 305 GHLDMAKKVYSAML--------------------GRRLMPNRKIYQTMIHYLCQE--GDF 342
G + A V+ M+ G RL + +++Q M+ + C ++
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 343 N-LAYIMCK------------DSMKKNWVPSVDTISALLEGLKKNNQ 376
N L Y +CK + ++ + P V+ +LE L++++
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDD 452
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
AF + H S+N +++ + G D Y +M G P+ TY L+ +
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS 61
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+ R E ++ M +GC PN+ ++++ I L ++ +A +L+ M G +P+
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
VTY ++ G C+ G L A ++S M+ R P+ +Y +I ++GD AY + +
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA--LVQRRVPH-FSSNQL 399
+ ++K +P+V T ++LL G + + + ++ L Q VP+ F+ N L
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 1/264 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + K+G H T+ DM GC + L+ L +++ + ++ + +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ- 81
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++FS++I+I C +D+A ++ EM G +P+V+TY +L+S K + +
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ MV +GC P+ +NV I K +A +L M G P TYN ++ G
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F R G + ++ ML + +PN + ++ C+ GD A+ + + P
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
V + + L+ G+ +P +A ++
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLL 285
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
+P G+++R + +A + A F M GC V S + + L + +
Sbjct: 49 VPNTYTYGYLLRSLC---QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE 105
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
L E+ + H Q ++ ++ ++ C+MG L +A + M G PD + Y LI
Sbjct: 106 AAELLNEMIDGGH-QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
F K L+ M+ KGC P + T+N + K + L M R G
Sbjct: 165 DGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV 224
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ T+N ++ GFC+ G + A +++ M P+ Y T+I +C +G + A +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRL 284
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNN 375
++ ++ P + + + L++G K+
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSG 311
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A F +M GC V S N ++ + Q L E+ +
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS-GVGP 295
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI S+NI+I + + G LD A + E+ K G++PD +Y+T+I + + ++
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P+ A + L R ++ +L M +F P YNL++ C++
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
D +++ + R P+ +I + ++ L + D + A
Sbjct: 416 KRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 1/167 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + S N + ++S L E+P K ++ D FS++ +I C G +
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP-KSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A++V +M G PD L+ + R L+ MV C P + +N+ +
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
L +RS ++ + G PD ++++ RS D A+
Sbjct: 411 KLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 123/253 (48%), Gaps = 3/253 (1%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEH-QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
A++ + L+ R+F + L+E ++ P + +M + A M+ A+ +
Sbjct: 132 AYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDE 191
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M YGC+ L L ++ +K + E+ ++ + + F ++ +C+ G
Sbjct: 192 MPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEEL--RYRWKPSVKHFTSLLYGWCKEG 249
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
L +A V+V+M+ G++PD++ Y L+ + + ++ L M KGC PN ++
Sbjct: 250 KLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYT 309
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
V IQ L R +A ++ MQR G + D VTY+ +I GFC+ G + ++ M+ +
Sbjct: 310 VLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQ 369
Query: 321 RLMPNRKIYQTMI 333
PN+ IYQ ++
Sbjct: 370 GHFPNQVIYQHIM 382
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+LYG K G + A M G + + N L ++ + L E+ K
Sbjct: 241 LLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRK- 299
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + S+ ++I++ C+ L++A V VEMQ+ G + D++TY+TLIS F K + + G
Sbjct: 300 GCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRG 359
Query: 241 NGLWNLMVCKGCFPNLATF-NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L + M+ +G FPN + ++ + H + + +L+ MQ+ G PD YN VI+
Sbjct: 360 YELLDEMIQQGHFPNQVIYQHIMVAHEKKEELE-ECKELVNEMQKIGCAPDLSIYNTVIR 418
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
C+ G + ++++ M L P+ + MI+ ++G
Sbjct: 419 LACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQG 459
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 39/287 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +A + A D +M GC+ S ++ L + L+ +E+ ++ Q
Sbjct: 280 YAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEM-QRNGCQA 338
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I FC+ G + + Y ++ EM + G P+ + Y ++ A K E L
Sbjct: 339 DLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELV 398
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M GC P+L+ +N I+ + +L M+ G+ P T+ ++I GF
Sbjct: 399 NEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQ 458
Query: 305 GHLDMAKKVYSAMLGRRLMP--------------------------------------NR 326
G L A + + M+GR L N
Sbjct: 459 GCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNV 518
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ IH L +G A C M K+ +P DT + L+ GLKK
Sbjct: 519 SAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGLKK 565
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 2/245 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A F ++ Y K +VK + L + L + L+++ + I+ DI
Sbjct: 213 KNGSVKEAASLFEELR-YRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDA-GIEPDI 270
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+N ++ + + + AY ++ EM++ G +P+ +YT LI + K R E ++
Sbjct: 271 VVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVE 330
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC +L T++ I + + +L+ M + G P++V Y ++ +
Sbjct: 331 MQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEE 390
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ K++ + M P+ IY T+I C+ G+ + + PS+DT
Sbjct: 391 LEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVI 450
Query: 367 LLEGL 371
++ G
Sbjct: 451 MINGF 455
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
FNI++ FC+ G + A V + K G++P V++Y TL++ + + G L + M+
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G +D
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+A ++Y ML + L+P+ Y T+I+ LC++GD A+ + + K T + L+
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 369 EGLKKNNQPCKANTIMALVQRR 390
+G CK + A + R
Sbjct: 323 DGC------CKEGDLDAAFEHR 338
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + +G + +V S N + DL + F L
Sbjct: 142 FFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLN--EGFRLKS 199
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 200 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNG 259
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA+ L+ M G++ D++TY
Sbjct: 260 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYT 319
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G LD A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 320 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 379
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K K + ++ +QR
Sbjct: 380 GLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQR 413
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK + E+ K ++ D
Sbjct: 257 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK-GLKXDK 315
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G LD A+ M + ++ D + YT LIS ++ R +
Sbjct: 316 ITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 375
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M+ G P+ T+ + I K W+ +KL+ MQR G P VTYN+++ G
Sbjct: 376 MLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 9/266 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
+ K A F +M G + + N+ L V ++R + E+ E+ + +
Sbjct: 257 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVT 315
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I ++ + G+L++A + EM+ G+KPDV+TYTTLIS + + + ++ MV
Sbjct: 316 YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375
Query: 249 CKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRS 304
GC PNL T+N I+ H V + ++M + F G PD VT+N ++ F ++
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFP----EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 431
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G V+ M +P R Y ++I + G F+LA + K M+ P V T
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 491
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+A+L L + + +A + A ++ R
Sbjct: 492 NAVLSALARGGRWEQAEKLFAEMEER 517
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF A R ++Y++ + A A+R D ++ L + S +
Sbjct: 508 EKLF----AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++++ K + A F ++ C + LNA + + ++R ++ ++ L + E
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES- 622
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I ++N ++ + +G +K ++ E++ GV+PD +Y T+I A+ + + +
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 682
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L++ M C G P++ T+N+ ++ V+ +A +L+ M G +P+E TYN +++G
Sbjct: 683 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 742
Query: 301 FCRSGHLDMAK 311
+CR+G L AK
Sbjct: 743 YCRNGKLTDAK 753
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 100 EHLLEHQKSLPQ-----GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKS 152
+ LLE +L Q G + + ++ G +AG I A+ + +M GCK + +
Sbjct: 326 DGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCT 385
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
NA +K+ + A E + DI ++N ++ F + G+ + V EM
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDEFRSAGFVP-DIVTWNTLLAVFGQNGLDSEVSGVFKEM 444
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+K G P+ TY +LIS++ + ++ ++ M+ G +P+++T+N + L R
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 504
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
QA KL M+ +PDE +Y+ ++ + + LD K + + R+ P+ + +T+
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ + + A + +K ++ ++A++ KN K I++L++
Sbjct: 565 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 393 HFSSNQLSAFKSILSK 408
+ S+ ++ + S+
Sbjct: 625 NLSAATYNSLMHMYSR 640
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 8/253 (3%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+ G A+ ++H G + L A++V+ + L A L P D
Sbjct: 117 GQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP-----D 171
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--EIGNGL 243
++ ++ AF G A V M GV+P ++TY ++ + K P E+ L
Sbjct: 172 AGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE-L 230
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M G P+ T+N I + +A ++ M+ G EPD+VT+N ++ + +
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ D A +V M P+ Y ++I ++G A + ++ K P V T
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 350
Query: 364 ISALLEGLKKNNQ 376
+ L+ GL + +
Sbjct: 351 YTTLISGLDRAGK 363
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/319 (17%), Positives = 116/319 (36%), Gaps = 36/319 (11%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G+ AM + M G V + NA L L + + E+ E+ +
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER-DCKP 521
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S++ ++ A+ LDK + ++ ++P TL+ K N +
Sbjct: 522 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 581
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF------------------- 285
+ K C ++ N + R + K++ LM+
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 286 ----------------GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
G+ PD +YN VI + R G + A +++S M L P+ Y
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ F A + + + + P+ T ++++EG +N + A ++ + +
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 761
Query: 390 RVPHFSSNQLSAFKSILSK 408
P +S + +++K
Sbjct: 762 LHPGYSKQEQQNLFEVIAK 780
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + +G LD+ + + M GV+PDV TY+ LI+ K+++ +
Sbjct: 168 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 227
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ KG PN TF I R A ++ M + PD +TYN +I
Sbjct: 228 DANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLI 287
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +++N
Sbjct: 288 YGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIR 347
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 348 LDDVAYTALISGLCQEGRSIDAEKML 373
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 102/191 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ FC+ G + A V + K G++P V+++ TL++ + + + G L +
Sbjct: 140 LYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKS 199
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 200 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 259
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A +VY ML + L P+ Y T+I+ LC++GD A + + K P + +
Sbjct: 260 RVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYT 319
Query: 366 ALLEGLKKNNQ 376
L++G K
Sbjct: 320 TLIDGCCKEGD 330
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A+ F + +G + +V S N + DL + F L
Sbjct: 142 FFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD--EGFRLKS 199
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 200 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 259
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M+ G++PD+++Y
Sbjct: 260 RVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYT 319
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 320 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSV 379
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P T + ++ K + ++ +QR
Sbjct: 380 GLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 123/300 (41%), Gaps = 27/300 (9%)
Query: 9 RFCHTA----AAAAADAIALNNIR--AVSLNKFPNREPLVDKPLEPPALVKLKAERDPEK 62
RFC A + DAI +R VS N N ++L D ++
Sbjct: 149 RFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMN------------GYIRLG---DLDE 193
Query: 63 LFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIM 122
F+L K+ H V + Y + ++ L + D L + L +G +
Sbjct: 194 GFRL-KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEM--LDKGLVPNGVTFTT 250
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ G K G + AM+ + M + + N + L + DLK Q + E+ K
Sbjct: 251 LIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK- 309
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D S+ +I C+ G L+ A+ M + ++ D + YT LIS ++ R
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDA 369
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M+ G P+ T+ + I K W +KL+ MQR G P VTYN+++ G
Sbjct: 370 EKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
KRT +++ L+ +TE L +P ++FS+N ++ C+ +A
Sbjct: 136 KRTSDAMDIVLRRMTE----------LGCIP-------NVFSYNNLLNGLCDENRSQEAL 178
Query: 207 LV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+ M + + G PDV++YTT+I+ F+K+ + ++ M+ +G P++ T++ I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 238
Query: 264 QHLVNKR---RSW---------QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
L + + W ++ KL LM R G++PD +TY+ +I G+C +G +D A
Sbjct: 239 AALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 298
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K+ S M+ L PN Y T+I+ C+ A ++ K+ P + T + +L+GL
Sbjct: 299 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 358
Query: 372 KKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + A + + +LS + IL
Sbjct: 359 FQTRRTAAAKELYVRITESGTQI---ELSTYNIIL 390
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGL 243
D+ ++ I+I C G LD + + + K G + + IT+T L+ D R + + +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM---QRFGIEPDEVTYNLVIKG 300
M GC PN+ ++N + L ++ RS +A +L+ +M + G PD V+Y VI G
Sbjct: 146 LRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-------- 352
F + G D A Y ML R ++P+ Y ++I LC+ + + CK+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKL 265
Query: 353 ----MKKNWVPSVDTISALLEG 370
++ P + T S L++G
Sbjct: 266 FDLMVRIGVKPDIITYSTLIDG 287
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E R +++ + F + V + ++ DI +++ +I +C G +D+A ++ M +G+KP+
Sbjct: 256 EGRVIESEKLFDLMV--RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 313
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY+TLI+ + K +R E L+ M G P++ T+N+ +Q L RR+ A +L
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G + + TYN+++ G C++ D A +++ + L + + MI L + G
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 432
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVE------------MQKLGVKPDVITYTTLISAFY 232
D+ +++ +I A C+ +DK + E M ++GVKPD+ITY+TLI +
Sbjct: 230 DVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 289
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + L + MV G PN T++ I R A L M+ G+ PD +
Sbjct: 290 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 349
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
TYN++++G ++ AK++Y + Y ++H LC+
Sbjct: 350 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 395
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 76/156 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++ +I +C++ ++ A ++ EM+ GV PD+ITY ++ ++ R L+
Sbjct: 312 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 371
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G L+T+N+ + L + + A ++ + ++ + T+N++I +
Sbjct: 372 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 431
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G D AK ++ A L+PN Y+ M + +G
Sbjct: 432 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 467
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ + D+ +N +I FC+ G+++ A ++ M++ GV+ D +TY +L++ R
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L MV + PN+ TF I V + + +A K M R I+PD TYN +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C G +D AK++ M+ + P+ Y T+I+ C+ + + ++ ++
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGL 345
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
V T + +++G + +P A I + + R
Sbjct: 346 VVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I FC+ +D+ ++ EM + G+ D +T+ T+I +++ RP+ ++
Sbjct: 313 DVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIF 372
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G PN+ T+++ + L R +A L MQ+ +E D TYN+VI G C
Sbjct: 373 SRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMI 429
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G+++ A ++ ++ + L P+ Y TMI C++
Sbjct: 430 GNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 95/230 (41%), Gaps = 35/230 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D++++NIVI C A V+ +M K G +PDV+T ++LI+ F + NR
Sbjct: 100 IGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAV 159
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + M C ++ +N I A L G M+R G+ D VTYN ++ G
Sbjct: 160 DLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGL 219
Query: 302 CRSGHL--------DM---------------------------AKKVYSAMLGRRLMPNR 326
C SG DM AKK Y M+ R + P+
Sbjct: 220 CCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDV 279
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y +MIH LC G + A + + K P V T + L+ G K +
Sbjct: 280 FTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKR 329
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I C G +D+A ++ M G PDV+TY TLI+ F K R + G L
Sbjct: 278 DVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLV 337
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +G + TFN IQ R A ++ R G P+ TY++++ G C +
Sbjct: 338 REMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIF---SRMGSRPNIRTYSILLYGLCYN 394
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDT 363
++ A ++ +M + + Y +IH +C G+ A+ + C S K P V T
Sbjct: 395 WRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSF-KGLEPDVVT 453
Query: 364 ISALLEGL 371
+ ++ G
Sbjct: 454 YTTMISGF 461
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD+A + M + P ++ ++ L+S K ++ L++ M G +L T+N+
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L R A ++G M +FG EPD VT + +I GFC+ + A + S M R
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYI----MCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ IY T+I C+ G N A + M +D ++ + V T ++L+ GL + +
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTV----TYNSLVTGLCCSGRR 225
Query: 378 CKANTIM 384
A +M
Sbjct: 226 SDAARLM 232
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E +K ++ DI ++NIVI C +G ++ A+ + + G++PDV+TYTT+IS F
Sbjct: 403 LFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462
Query: 233 KDNRPEIGNGLWNLMVCKGCFP 254
+ + + L+ M G P
Sbjct: 463 RKRLWDKADFLYRKMQEDGLLP 484
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I+ A + F +M YGCK N L + + + + ++ ++ I DI
Sbjct: 951 KAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDI 1009
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ I+I C+ G L+ ++ ++G++PD+ITY LI K R E L+N
Sbjct: 1010 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1069
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PNL T+N I HL ++ +A K+ + G +P+ TYN +I+G+ SG
Sbjct: 1070 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1129
Query: 307 LDMAKKVYSAMLGRRLMPNRK---IYQTMIHYLCQEGD 341
D A Y M+ +PN I++ M +L + D
Sbjct: 1130 TDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSD 1167
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 8/326 (2%)
Query: 51 LVKLKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
+V RD E + L + AH V N Y++ + L ARRFD +L ++
Sbjct: 281 MVAFGKRRDVETVLWLLREMEAHG--VKPNVYSYTICIRVLGQARRFDEAYRILAEMEN- 337
Query: 110 PQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+G + I +++ AG I A D F+ M K + L ++ + +
Sbjct: 338 -EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
++ + + ++ ++ VI A C++G + +A + EM++ G+ P+ +Y +L
Sbjct: 397 SVMEIWNAMKADGY-NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
IS F K +R L+ M G PN T + I + S +A + LM+ GI
Sbjct: 456 ISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 515
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD V N V+ G +SG L MAK+V+ + + P+ Y MI + F+ A
Sbjct: 516 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 575
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
+ D ++ N VP V +++L++ L K
Sbjct: 576 IFYDMIENNCVPDVLVVNSLIDTLYK 601
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 14/277 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL------TESRDLKAIQAFLMEVPEKF 180
KA A++ F M ++G K N VL +KAIQ + E+ +
Sbjct: 461 KADRFGDALELFKYMDIHGPKP-----NGYTHVLFINYYGKSGESIKAIQRY--ELMKSK 513
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D+ + N V+ + G L A V E++ +GV PD ITYT +I K ++ +
Sbjct: 514 GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEA 573
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ M+ C P++ N I L R +A ++ ++ +EP + TYN ++ G
Sbjct: 574 VKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAG 633
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
R G + + M PN Y T++ LC+ G N A M K +P
Sbjct: 634 LGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 693
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR-RVPHFSS 396
+ + + ++ GL K + +A +I +++ +P +++
Sbjct: 694 LSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYAT 730
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 9/293 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ + L D E L K L G E ++ GK+ I+ + +M
Sbjct: 836 SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 895
Query: 142 HLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
H G + T + N + L +SR L +AI + + + F ++ ++ + G
Sbjct: 896 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPT--PCTYGPLLDGLLKAG 953
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++ A + EM + G K + Y L++ E L+ MV +G P++ ++
Sbjct: 954 RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 1013
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
+ I L ++ Q N + ++ G+EPD +TYNL+I G +S L+ A +++ M
Sbjct: 1014 IIIDTLC---KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 1070
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ ++PN Y ++I +L + G A M ++ + K W P+V T +AL+ G
Sbjct: 1071 QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 119/259 (45%), Gaps = 4/259 (1%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
+G S N+ + L + + + E+ E D F++N+++ A + ++
Sbjct: 828 FGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKE-LGCGPDEFTYNLLLDAMGKSMRIE 886
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+ V EM + G + +TY T+IS K R E L+ ++ +G P T+ +
Sbjct: 887 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 946
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L+ R A L M +G + + YN+++ G +G+ + ++ M+ + +
Sbjct: 947 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1006
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P+ K Y +I LC+ G N + ++ P + T + L++GL K+ + +A ++
Sbjct: 1007 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1066
Query: 384 MALVQRR--VPH-FSSNQL 399
+Q++ VP+ ++ N L
Sbjct: 1067 FNEMQKKGIVPNLYTYNSL 1085
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Query: 99 IEHLLEHQKSLP-QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
IE +L+ Q+ + +G ++ ++ G K+ ++ A+D +Y++ G T +
Sbjct: 885 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 944
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L ++ ++ + E+ E + + + +NI++ G +K + +M
Sbjct: 945 LLDGLLKAGRIEDAENLFNEMLE-YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 1003
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ PD+ +YT +I K + G + ++ G P+L T+N+ I L +R +A
Sbjct: 1004 GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 1063
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L MQ+ GI P+ TYN +I ++G A K+Y +L + PN Y +I
Sbjct: 1064 VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123
Query: 336 LCQEGDFNLAY 346
G + AY
Sbjct: 1124 YSVSGSTDSAY 1134
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+++ +M +G+ G + D M K V + A L L++ L V
Sbjct: 174 YMLDLMRDHGRVGDMAEVFDV---MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-PV 229
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ I + +++N ++ + G +A V M GV P V TY+ L+ AF K R
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGK--R 287
Query: 237 PEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ LW L M G PN+ ++ + I+ L RR +A +++ M+ G +PD +T+
Sbjct: 288 RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITH 347
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAYIMCK 350
++I+ C +G + AK V+ M P+R Y T++ G+ + M
Sbjct: 348 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKA 407
Query: 351 DSMKKNWVPSVDTISALLE 369
D N V I AL +
Sbjct: 408 DGYNDNVVAYTAVIDALCQ 426
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDI 186
+I A F +M GC + N L + +S ++ +++V E+ H +
Sbjct: 849 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE----MLKVQEEMHRKGYESTY 904
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + L++A + + G P TY L+ K R E L+N
Sbjct: 905 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRR-SWQANKLMGLMQRF---GIEPDEVTYNLVIKGFC 302
M+ GC N +N+ L+N R + K+ L Q GI PD +Y ++I C
Sbjct: 965 MLEYGCKANCTIYNI----LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 1020
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++G L+ + +L L P+ Y +I L + A + + KK VP++
Sbjct: 1021 KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1080
Query: 363 TISALLEGLKKNNQPCKAN 381
T ++L+ L K + +A
Sbjct: 1081 TYNSLILHLGKAGKAAEAG 1099
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++++++ AF + ++ ++ EM+ GVKP+V +YT I + R + + M
Sbjct: 276 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEM 335
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+GC P++ T V IQ L + R A + M++ +PD VTY ++ F +G
Sbjct: 336 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGES 395
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
++++AM N Y +I LCQ G A M + +K VP + ++L
Sbjct: 396 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455
Query: 368 LEGLKKNNQ 376
+ G K ++
Sbjct: 456 ISGFLKADR 464
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL--KVLTESRDLKAIQAFLMEVPE 178
I+ + K G++K A+ + L +T +S +L +L ++ K+I+ E+
Sbjct: 734 ILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIE--FAEIIA 791
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
I D F +IK C+ +A+ ++ + + GV +Y +LI +N +
Sbjct: 792 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLID 851
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
I GL+ M GC P+ T+N+ + + R + K+ M R G E VTYN +I
Sbjct: 852 IAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII 911
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +S L+ A +Y ++ + P Y ++ L + G
Sbjct: 912 SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 953
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 2/282 (0%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ + L ++F+ I +L+ K +E F + I Y +A +K A+D F M
Sbjct: 41 SYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFAL-ISRRYARARKVKEAVDAFMKM 99
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
+G K +N L L +SR ++ Q ++ ++ + DI S+ I+++ + +
Sbjct: 100 EKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVA-DIKSYTILLEGWGQEKN 158
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
L + V EM+ G +PDV+TY LI+A K R + L++ M K C P+ +
Sbjct: 159 LSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCT 218
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L ++R +A + L + G P+ TYN V+ +C S +D ++ M
Sbjct: 219 LINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGG 278
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ P+ + Y ++H+L + G +AY + + + PSV T
Sbjct: 279 VGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVST 320
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 134 AMDTFYDMHLYGCKRT-------VKSLNAALKVLTESRD---LKAIQAFLMEVPEKFHIQ 183
A++ F++M CK + + L A K L+E+ + L F+ E P
Sbjct: 197 AIELFHEMEAKNCKPSPHIYCTLINGLGAE-KRLSEALEFFELSKASGFVPEAP------ 249
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++N V+ A+C +D + EM+K GV P TY ++ + + +I +
Sbjct: 250 ----TYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSV 305
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M C+GC P+++T+ + ++ N+ R A K+ M+ GI P ++ +I C
Sbjct: 306 FQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCH 365
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
LD A + ML + P +++ + L EG
Sbjct: 366 ESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEG 402
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++I++ G AY V +M G +P V TY ++ F ++R ++ +W+ M
Sbjct: 285 TYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQM 344
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P + F+ I L ++ + +A M GI P ++ + + L
Sbjct: 345 KAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNL-----KQNLL 399
Query: 308 DMAKKVYSAMLGRRLMPNRK 327
D KK + R+L RK
Sbjct: 400 DEGKKDTVVVFERKLDKLRK 419
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 14/191 (7%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL---MVC 249
+K G L ++ E QK G + +Y LI + K + N +WNL M
Sbjct: 12 LKKLSNAGALALSFFRWAEKQK-GFQYSTESYHALIESLGKIKQ---FNVIWNLVTDMKQ 67
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG N TF + + R+ +A M++FG++ + N ++ C+S ++
Sbjct: 68 KGLL-NKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVER 126
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A+ V+ M R + + K Y ++ QE + + + + + + P V T L+
Sbjct: 127 AQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILI- 185
Query: 370 GLKKNNQPCKA 380
N CK+
Sbjct: 186 -----NAHCKS 191
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 130/265 (49%), Gaps = 5/265 (1%)
Query: 101 HLLEHQKSLPQGRREGFIMRIMML-YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK- 158
H+LE K G + F M+ K G + A+ M GCK + NA +
Sbjct: 115 HVLEIAKQ-EGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALING 173
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
+L S+ AI+ F E+ + H I ++N +I C+ +AY ++ EM + G
Sbjct: 174 LLGASKFEDAIRVF-KELGTR-HCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWN 231
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VITY+ LI +D++ E+ LWN ++ KG P++ N+ I L + ++ A++L
Sbjct: 232 PSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASEL 291
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
M + P+ VTYN +++GF + G A +++ +L L+P+ Y + LC
Sbjct: 292 YFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCA 351
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDT 363
++A + D++ KN VP+V T
Sbjct: 352 CNRISVAILFLNDAVTKNIVPTVIT 376
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
++E+ ++ D F+++ +I C+MG LDKA V+ M + G KP+ Y LI+
Sbjct: 116 VLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLL 175
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++ E ++ + + C P + T+N I L R +A L+ M G P +
Sbjct: 176 GASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVI 235
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+L+IKG C+ ++MA ++++ ++ + P+ +++ +IH LC G A + D
Sbjct: 236 TYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDM 295
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
N P++ T + L+EG K A I A + R
Sbjct: 296 NHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILR 332
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
ML G KAG IK+ D + M G R V S N ++ L + ++ + + + E
Sbjct: 31 MLNGFFKAGRIKNCFDLWELMGREG-SRNVASFNTMMRGLFNNGEVDEVFSIWELMKESG 89
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D ++ I++ FC+ G +K+ V+ ++ G D Y+ +IS K + +
Sbjct: 90 FVE-DSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKA 148
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ N M+ GC PN +N I L+ + A ++ + P VTYN +I G
Sbjct: 149 VSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLING 208
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ A + ML + P+ Y +I LCQ+ +A + + K + P
Sbjct: 209 LCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPD 268
Query: 361 VDTISALLEGL 371
V + L+ GL
Sbjct: 269 VQMHNILIHGL 279
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 71/250 (28%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
CE G ++ A V EM + + PD + Y +++ F+K R + LW LM +G N+
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGS-RNV 59
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH---------- 306
A+FN ++ L N + + LM+ G D TY +++ GFC++G+
Sbjct: 60 ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119
Query: 307 -------------------------LDMAKKVYSAMLGRRLMPNRKI------------- 328
LD A V + M+ PN ++
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179
Query: 329 ----------------------YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
Y T+I+ LC+ F AY + K+ ++K W PSV T S
Sbjct: 180 FEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSL 239
Query: 367 LLEGLKKNNQ 376
L++GL ++++
Sbjct: 240 LIKGLCQDHK 249
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M I PD V YN ++ GF ++G + ++ ++GR N + TM+ L G+
Sbjct: 16 MAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWE-LMGREGSRNVASFNTMMRGLFNNGE 74
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
+ + + + + +V T L+ G KN K+ ++ + ++ + SA
Sbjct: 75 VDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSA 134
Query: 402 FKSILSK 408
S L K
Sbjct: 135 MISGLCK 141
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 184 FDIF-SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
FD+ +++ ++ + C+ G+L A M G++PD++ Y +LI R
Sbjct: 145 FDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATT 204
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L M+ KG PN+ TFNV + + + + +A +M M G+EPD VTYN VI G C
Sbjct: 205 LLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHC 264
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++ A KV+ M+ + L+PN Y ++IH C+ + N A + + + V
Sbjct: 265 LLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVV 324
Query: 363 TISALLEGLKKNNQP 377
T S L+ G K +P
Sbjct: 325 TWSTLIGGFCKAGRP 339
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 13/237 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++ +I +C+ ++KA V+ EM G+ DV+T++TLI F K RPE L+
Sbjct: 287 NVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELF 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M PNL T + + L + +A L M++ +E + VTYN+V+ G C
Sbjct: 347 CTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSF 406
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++++S + + + + Y TMI LC+EG + A + + P+ T
Sbjct: 407 GKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTY 466
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR------------VPHFSSN-QLSAFKSILSK 408
+ L+ GL + ++ + L++ + + +FS+N + SA + L K
Sbjct: 467 NVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYFSANKENSALQVFLQK 523
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G + TV + + L ++ A F + E + + ++ +I C++G
Sbjct: 72 GVEPTVVTFATLINGLCAEGNVGAAARF-ADSLEDMGYESNSYTHGTIINGLCKVGDTAG 130
Query: 205 A--YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A YL +E + G +I Y+T++ + KD + ++ M CKG P+L +N
Sbjct: 131 AISYLEKIEGRNRGFDL-LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSL 189
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + R +A L+G M R GI P+ T+N+++ FC+ G + AK + M+ +
Sbjct: 190 IHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGV 249
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
P+ Y ++I C N A + + + K +P+V T S+L+ G K KA
Sbjct: 250 EPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKA 307
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 7/207 (3%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + IVI C + + V+ M K+GV+P V+T+ TLI+ +
Sbjct: 41 DVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFA 100
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQA----NKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + G N T I L + A K+ G + F + + Y+ ++
Sbjct: 101 DSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLL---IAYSTIMDS 157
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G L +A +S M + + P+ Y ++IH LC G +N A + + M+K +P+
Sbjct: 158 LCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPN 217
Query: 361 VDTISALLEGLKKNNQPCKANTIMALV 387
V T + L++ K + +A TIM +
Sbjct: 218 VQTFNVLVDNFCKEGKISRAKTIMCFM 244
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ T + I L + + + ++G M + G+EP VT+ +I G C G++ A
Sbjct: 37 GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAA 96
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ ++ N + T+I+ LC+ GD
Sbjct: 97 ARFADSLEDMGYESNSYTHGTIINGLCKVGD 127
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 147/309 (47%), Gaps = 11/309 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ + L RR D L E K QG I +++ +A + F +M
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKV--QGMTPTVISYTSLMWEEAKRL------FNEM 295
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQA-FLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
G + V + N + VL ++ K I+A L+EV + I ++ ++N +I+ FC +G
Sbjct: 296 VNQGVQPNVVTFNVLIDVL--CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 353
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
L+ A + V M G +PDVI YT LI+ + K ++ E L+N M+ G P++ T+
Sbjct: 354 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 413
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L + A KL G+M+ +GI D Y + + G C++G L A ++++ +
Sbjct: 414 ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY 473
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + + + +I LC+ G A+ + + ++ P V T + ++ + Q KA
Sbjct: 474 NIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 533
Query: 381 NTIMALVQR 389
N + +++
Sbjct: 534 NILFQKMEK 542
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A D M G + + N+ ++ DL + + + +P K + D+
Sbjct: 316 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK-GCEPDV 374
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ ++I +C+ +++A + M ++G +PDV TY L++ ++ + L+ +
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G +L + + + L ++A +L ++ + I+ D +N +I G C++G
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ A +++ + L P+ Y MIH C+ G A I+ + K P T +
Sbjct: 495 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 554
Query: 367 LLEGLKKNNQPCKANTIM-ALVQRRV 391
L+ G ++ + K ++ +VQR V
Sbjct: 555 LIRGFFESKKLEKVVELLHMMVQRDV 580
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
++ ++ AIQAF + FH+ + SF ++ ++ + + + +M+
Sbjct: 71 KTGNITAIQAF-----QFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLS 125
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSW 273
G+ PD T L++ NR +G GL + ++ +G P++ T+ I+ L + R
Sbjct: 126 GISPDCCTLNILLNCLCNVNR--VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML------GRRLMPNRK 327
+A L MQ+ G P+ +TY ++KG CR+G++ +A K++ ML G P
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
Y +I LC++ + A + ++ + P+V + ++L+
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM 284
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ ++I+ DI FN +I C+ G L+ A+ + ++ + ++PDV+TY +I F + +
Sbjct: 471 KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 530
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
N L+ M GC P+ T+ I+ ++ + +L+ +M + + D
Sbjct: 531 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++LM+ P L++F + L + Q L M+ GI PD T N+++ C
Sbjct: 83 FFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLC 142
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ V + +L R +P+ Y T+I LC E + A ++ K P+
Sbjct: 143 NVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAI 202
Query: 363 TISALLEGL 371
T L++GL
Sbjct: 203 TYGTLMKGL 211
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
KRT +++ L+ +TE L +P ++FS+N ++ C+ +A
Sbjct: 136 KRTSDAMDIVLRRMTE----------LGCIP-------NVFSYNNLLNGLCDENRSQEAL 178
Query: 207 LV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+ M + + G PDV++YTT+I+ F+K+ + ++ M+ +G P++ T++ I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 238
Query: 264 QHLVNKR---RSW---------QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
L + + W ++ KL LM R G++PD +TY+ +I G+C +G +D A
Sbjct: 239 AALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 298
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K+ S M+ L PN Y T+I+ C+ A ++ K+ P + T + +L+GL
Sbjct: 299 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 358
Query: 372 KKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ + A + + +LS + IL
Sbjct: 359 FQTRRTAAAKELYVRITESGTQI---ELSTYNIIL 390
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGL 243
D+ ++ I+I C G LD + + + K G + + IT+T L+ D R + + +
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM---QRFGIEPDEVTYNLVIKG 300
M GC PN+ ++N + L ++ RS +A +L+ +M + G PD V+Y VI G
Sbjct: 146 LRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-------- 352
F + G D A Y ML R ++P+ Y ++I LC+ + + CK+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKL 265
Query: 353 ----MKKNWVPSVDTISALLEG 370
++ P + T S L++G
Sbjct: 266 FDLMVRIGVKPDIITYSTLIDG 287
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E R +++ + F + V + ++ DI +++ +I +C G +D+A ++ M +G+KP+
Sbjct: 256 EGRVIESEKLFDLMV--RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 313
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY+TLI+ + K +R E L+ M G P++ T+N+ +Q L RR+ A +L
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ G + + TYN+++ G C++ D A +++ + L + + MI L + G
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 432
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVE------------MQKLGVKPDVITYTTLISAFY 232
D+ +++ +I A C+ +DK + E M ++GVKPD+ITY+TLI +
Sbjct: 230 DVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 289
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + L + MV G PN T++ I R A L M+ G+ PD +
Sbjct: 290 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 349
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
TYN++++G ++ AK++Y + Y ++H LC+
Sbjct: 350 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 395
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 76/156 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++ +I +C++ ++ A ++ EM+ GV PD+ITY ++ ++ R L+
Sbjct: 312 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 371
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G L+T+N+ + L + + A ++ + ++ + T+N++I +
Sbjct: 372 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 431
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G D AK ++ A L+PN Y+ M + +G
Sbjct: 432 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 467
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 8/297 (2%)
Query: 82 AFEDTVSRLAGA-RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYD 140
A+ D ++RL + + HLL+ P+ R+ +MR M+ ++G + A + F +
Sbjct: 84 AWSDLMNRLPSVPEAYAFYLHLLDAGVP-PEARQFNMLMRDMI---RSGKLASARNVFDE 139
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M G + TV + N + + ++ DL A L + K I D++++ I+ C+ G
Sbjct: 140 MLRRGVQPTVVTFNTLMSGMCKASDLNNANA-LRGLMAKAGIAPDVYTYGAFIQGLCKTG 198
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + EM + G+ P+ + TTLI A K+ G L M +G +L +N
Sbjct: 199 RIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYN 258
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ R AN ++ M++ G++PD+VTY +I G C+ G LD A ++ M
Sbjct: 259 ALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDE 318
Query: 321 RLMPNRKIYQTMIHYLCQEG-DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + Y +I L + G + I+C + M+ P T + +++ KN
Sbjct: 319 GVALDDVTYTALISGLSKAGRSVDAERILC-EMMEAGLQPDNTTYTMVIDAFCKNGD 374
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR----DLKAIQAFLMEVPEKFHI 182
K G I+ AM+ F +M C+R + L L ++ D+ A E+ + +
Sbjct: 196 KTGRIQDAMEMFEEM----CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR-GV 250
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
+ D+ ++N ++ FC + + A ++ EM+K G+KPD +TYTTLI K+ +
Sbjct: 251 KADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME 310
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ M +G + T+ I L RS A +++ M G++PD TY +VI FC
Sbjct: 311 MKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFC 370
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++G + K M + P Y +++ C G A ++ + P+
Sbjct: 371 KNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDI 430
Query: 363 TISALLEG 370
T + LL+G
Sbjct: 431 TYNILLDG 438
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 39/243 (16%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + ++ ++M G K + + NA + RD+KA + E+ K ++ D
Sbjct: 231 KEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM-RKDGLKPDK 289
Query: 187 FSFNIVIKAFCEMGILDKAY-----------------------------------LVMVE 211
++ +I C+ G LD A ++ E
Sbjct: 290 VTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE 349
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G++PD TYT +I AF K+ + G M KG P + T+NV + + +
Sbjct: 350 MMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQ 409
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A+ L+ M G+ P+++TYN+++ G C+ G + +++ SA + ++ + +Y +
Sbjct: 410 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSA---KGMVSDFGVYTS 466
Query: 332 MIH 334
+I+
Sbjct: 467 LIN 469
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ + C V + L L R + I+ F + DI
Sbjct: 169 KTGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMA--RTGPSPDI 226
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI+ + G+ AY ++ M + GV PDV+T+ +LI+ +DNR L
Sbjct: 227 YTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQE 286
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC PN T+ + ++ L R+ + +L + + P+ TYN V+ C++G
Sbjct: 287 MVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGR 346
Query: 307 LDMAKKVYSAMLGRRLM-PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A +++ ML PN Y+ +IH LC + + A ++ K+ P V
Sbjct: 347 LDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYG 406
Query: 366 ALLEGLKKNNQ 376
++ K +
Sbjct: 407 TIVAAFCKQGR 417
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 131/287 (45%), Gaps = 13/287 (4%)
Query: 104 EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
E K+L Q ++ + + Y + G ++ ++ DM G +++ LN L+ L ++
Sbjct: 5 EESKALFQLWKKQAFPALAVKYSEQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKA 64
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
++ FL E F ++ + +++I++ A + A ++ +M+ +G++ D T
Sbjct: 65 GNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQMESVGLEADKDT 124
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+ +I + K + L M+ + C P+ ++ I+ L R +A ++
Sbjct: 125 YSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEI----- 179
Query: 284 RFGIEPDE------VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
E D VTYN ++ GF ++ L KV++ M P+ Y + L
Sbjct: 180 --AKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLS 237
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ G + AY + + +P V T ++L+ GL ++N+ +A T++
Sbjct: 238 RHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLI 284
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I++K D+ + + + P+V TY T++SA K R + + L+ +
Sbjct: 297 ITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGV 356
Query: 247 MVCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ C P N T+ I L K +A L+ M + G PD Y ++ FC+ G
Sbjct: 357 MLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQG 416
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+D A ++ M ++ +++T++ LC+
Sbjct: 417 RIDEAFELLERM---PFAGDKVMFRTLVRALCK 446
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++IVI A C MG+ D+ ++V+ M++ GVKPD + YT + AF + R + L
Sbjct: 374 DVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLL 433
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+MV GC+P++ ++N + L + + +A +L +M GIEP+ TY +I+ C +
Sbjct: 434 EMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCST 493
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMI--HY 335
L+ A+ +++ M + +P+ + Y+ +I HY
Sbjct: 494 KKLEGARHLFNFMKLSKCVPDMETYKALILGHY 526
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 3/280 (1%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
+ V LA A+R I+ +L + +++ Y M+ A F ++
Sbjct: 34 YNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALDLVVCYANGAMVDRAQAIFNELR 93
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + N L + + + + + ++ K + F + + +++ FC+ +
Sbjct: 94 HQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAK-NFTFSDSTADALVRIFCKALAV 152
Query: 203 DKA--YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
DKA +L + + L V Y LI K +R + L+ LM ++ T+N
Sbjct: 153 DKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYN 212
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I+ + QA K++ M+ +PD+ Y VI GFC+ G+ A + M
Sbjct: 213 NMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEA 272
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
P+ ++ +I LC+ F+ A ++ K S++ P
Sbjct: 273 GYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPD 312
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G KPDV+ Y+ +I A + G + M +G P+ + + + R A
Sbjct: 370 GCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDA 429
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ +M G PD ++YN ++ C +G + A +++ M+ + PN Y +I
Sbjct: 430 CRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRA 489
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
LC A + VP ++T AL+ G +N
Sbjct: 490 LCSTKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQN 528
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ ++ D + I + AFC LD A ++ M + G PDVI+Y TL+ A +
Sbjct: 402 EERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQE 461
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E L+ +MV G PN+ T+ I+ L + ++ A L M+ PD TY +
Sbjct: 462 EEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDMETYKAL 521
Query: 298 IKG 300
I G
Sbjct: 522 ILG 524
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 114/217 (52%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
++E E+ +Q D++++NI+I C + +A+L++ M+K + PD TY TLI+ F+
Sbjct: 282 VLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFF 341
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
++ + ++N M+ + P++AT+ I RR +A ++ MQ G+ P E+
Sbjct: 342 REGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSEL 401
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+ ++ G+C+ L A + + R + N+ + +I CQ G+ + A + K
Sbjct: 402 TYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSM 461
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ P V T SAL+ G+ + + + I++ +Q+
Sbjct: 462 FEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQK 498
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 8/258 (3%)
Query: 120 RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF---LMEV 176
RI+ Y G I A + DM YG V + L+ L + L + F L+++
Sbjct: 580 RIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDI 639
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P D +FN ++ C G LD+A + +M K PD+ TYT L+S F + +
Sbjct: 640 P----FAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGK 695
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM-GLMQRFGIEPDEVTYN 295
+ +M+ KG P+ + + L+N+ + A+ + ++ + G+ D + YN
Sbjct: 696 ILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYN 755
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
++ G+ +S +++ K++ S M + PN Y ++H + G F+ + + K ++K
Sbjct: 756 SLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK 815
Query: 356 NWVPSVDTISALLEGLKK 373
P T L+ GL +
Sbjct: 816 GIRPDNVTYRLLILGLSE 833
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 36/252 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A+ F D++ G NA L + + F + + +I F
Sbjct: 515 YCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHF-RQYMSRMNISF 573
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D SFN +I ++C G + A+ V +M + G P+V TY L+
Sbjct: 574 DSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRG-------------- 619
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+C+G HLV QA + M + DE T+N ++ G CR
Sbjct: 620 ---LCQG------------GHLV------QARQFMSCLLDIPFAIDEKTFNALLLGICRY 658
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD A + M+ +P+ Y ++ C++G A ++ + ++K VP
Sbjct: 659 GTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAY 718
Query: 365 SALLEGLKKNNQ 376
+ LL GL Q
Sbjct: 719 TCLLNGLINEGQ 730
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 10/248 (4%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKS----LNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
G +K A F+++ CK + + N+ + +SR++ I+ + ++ + +
Sbjct: 729 GQVKAASYVFHEII---CKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQN-EVYP 784
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ S+NI++ + + G K+ + M + G++PD +TY LI + +I
Sbjct: 785 NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 844
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G FP+ F++ I K + A ++ M+ + P T++ +I G R
Sbjct: 845 EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRK 904
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDT 363
G+LD + KV ML L PN Y +++ C+ G+ + A+ + K+ MK VP+
Sbjct: 905 GYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRL-KEEMKAIGIVPAEVA 963
Query: 364 ISALLEGL 371
S+++ GL
Sbjct: 964 ESSIIRGL 971
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D ++ ++I E G++D A + +M G+ PD + + LI+AF + ++
Sbjct: 817 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N M P+ TF+ I L+ K ++K++ M + G++P+ Y ++
Sbjct: 877 QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M ++P ++I LC+ G A I+ M+ VP+V
Sbjct: 937 CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996
Query: 362 DTISALLEGLKKNNQPCKA---NTIMALVQRRVPHFSSNQL 399
T + L+ L K ++ A +M L + RV S N L
Sbjct: 997 ATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVL 1037
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ +I +C +DKA ++ EMQ GV P +TY+ L++ + K + L
Sbjct: 365 VATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLME 424
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +G N + I +A +++ M GI+PD +TY+ +I G CR
Sbjct: 425 DLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMA 484
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+ K++ S M ++PN +Y T+I Y C+ G
Sbjct: 485 KMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 519
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN------ 235
I D+ +++ +I C M + + ++ MQK G+ P+ + YTTLI + K
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525
Query: 236 -------------RPEIGNGLWNLMVCKGCFP----------------NLATFNVRIQHL 266
P I N L + +G + +FN I
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSY 585
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
++ A + M R+G P+ TY +++G C+ GHL A++ S +L +
Sbjct: 586 CHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDE 645
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
K + ++ +C+ G + A +C+ +K N +P + T + LL G + + A I+ +
Sbjct: 646 KTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQM 705
Query: 387 V 387
+
Sbjct: 706 M 706
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ A C +G +D+A+ + EM+ +G+ P + +++I + + E +++ M+ G
Sbjct: 932 LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSG 991
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P +ATF + L + + A L LM+ + D V+YN++I G C+ H+ A
Sbjct: 992 MVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDAL 1051
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+Y M + L PN Y T+ + G + +D ++ +P+
Sbjct: 1052 DLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPA 1100
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S N ++ A E G +L + E V T L+++ + + M
Sbjct: 193 SCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM 252
Query: 248 VCKGC-FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
K C N T+N + V K R A ++ M+R ++ D TYN++I CR
Sbjct: 253 --KSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKR 310
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A + M L P+ Y T+I+ +EG N A + +++N VPSV T +
Sbjct: 311 STRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTT 370
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
+++G +N + KA +I++ +Q
Sbjct: 371 MIDGYCRNRRIDKALSILSEMQ 392
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+ C G L++A +V M + G+ P V T+TTL+ + K+++ L LM
Sbjct: 967 IIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCR 1026
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
++ ++NV I L + A L G M+ G+ P+ TY + +G + +
Sbjct: 1027 LRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGE 1086
Query: 312 KVYSAMLGRRLMPNRK 327
++ + R L+P K
Sbjct: 1087 ELLEDIEERGLIPAYK 1102
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 92/241 (38%), Gaps = 35/241 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+I+I AF E + A V M+ L + P T++ +I+ + + + +
Sbjct: 855 DRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVL 914
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G PN + + +A +L M+ GI P EV + +I+G CR
Sbjct: 915 HEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRC 974
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH------------------------------ 334
G L+ A V+S+M+ ++P + T++H
Sbjct: 975 GKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSY 1034
Query: 335 -----YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
LC++ + A + + K P++ T L + + ++ ++
Sbjct: 1035 NVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEE 1094
Query: 390 R 390
R
Sbjct: 1095 R 1095
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFD 185
+ G ++ A+ F M G TV + + L ES+ A+ L + E ++ D
Sbjct: 973 RCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALH--LKRLMELCRLRVD 1030
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ S+N++I C+ + A + EM+ G+ P++ TY TL A Y R + G L
Sbjct: 1031 VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLE 1090
Query: 246 LMVCKGCFP 254
+ +G P
Sbjct: 1091 DIEERGLIP 1099
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 120/245 (48%), Gaps = 35/245 (14%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY--------- 232
+Q ++ +N +I + C++ ++++A+ + EM G+ PDV+TY+ LIS F+
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 233 --------------------------KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
KD + + G ++ +M+ +G PN+ T+ +
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
++ +AN + M + G+ PD +YN++I GFC+ +D A ++ M + ++PN
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
Y ++I LC+ G + A + + + P + T S++L+ L KN+Q KA ++
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 413
Query: 387 VQRRV 391
++ +V
Sbjct: 414 LKDQV 418
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFD 185
K ++ A D + +M G V + +A + LK AI F + E +I+ D
Sbjct: 190 KVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE--NIKPD 247
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+++FNI++ FC+ G + + V M K G+KP+V+TY +L+ + + N ++N
Sbjct: 248 VYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFN 307
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P+ ++N+ I ++ +A L M I P+ VTY +I G C+SG
Sbjct: 308 TMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSG 367
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ A K+ M R + P+ Y +++ LC+
Sbjct: 368 KISYALKLVDEMHDRGVPPDIITYSSILDALCK 400
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-YKDNRPEIG 240
I ++ + NI+I F ++G ++ V + K G P+VIT TTLI K + +
Sbjct: 91 IASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLI 150
Query: 241 NGLWNLMVCKGCF------------PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
NGL + + PN+ +N I + + +A L M GI
Sbjct: 151 NGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGIS 210
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
PD VTY+ +I GF G L A +++ M+ + P+ + ++ C++G +
Sbjct: 211 PDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV 270
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
MK+ P+V T +L++G Q KAN+I
Sbjct: 271 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSI 305
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+ +I C++G A ++ + V+P+V+ Y T+I + K L++ M
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V +G P++ T++ I + A L M I+PD T+N+++ GFC+ G +
Sbjct: 205 VSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 264
Query: 308 DMAKKVYSAMLGRRLMPN-----------------------------------RKIYQTM 332
K V++ M+ + + PN + Y M
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIM 324
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
I+ C+ + A + K KN +P+V T ++L++GL K+ +
Sbjct: 325 INGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 368
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE------ 238
++ ++ +I C+ G + A ++ EM GV PD+ITY++++ A K+++ +
Sbjct: 352 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411
Query: 239 --IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ + ++ + KG ++ + V IQ K +A L+ M+ G PD TY +
Sbjct: 412 TKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEI 471
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+I + DMA+K+ M+ R L+
Sbjct: 472 IILSLFKKDENDMAEKLLREMIARGLL 498
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH----- 181
K+G I +A+ +MH G + + ++ L L ++ + A L ++ ++
Sbjct: 365 KSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV 424
Query: 182 --IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
D++++ ++I+ FC G+ ++A ++ +M+ G PD TY +I + +K + ++
Sbjct: 425 KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDM 484
Query: 240 GNGLWNLMVCKG 251
L M+ +G
Sbjct: 485 AEKLLREMIARG 496
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A + F +M G + S ++ + VL + L E+ E+ I D +
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYT 436
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I FC G L A + EM G DV+TY T ++ K + L+N MV +
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ TF I+ +A L M R ++PD+VTYN +I GFC++G + A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+++ M+ + ++P+ Y T+++ C G A +C ++K P++ T + L++G
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 371 LKKNNQPCKA 380
++ KA
Sbjct: 617 YCRSGDMPKA 626
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 37/298 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A + + ++ G + V +LN + L + R + + FL ++ K + DI
Sbjct: 234 RTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK-GVFADI 292
Query: 187 FSFNIVIKAFCEMGILDKAYL-----------------------------------VMVE 211
++N +I A+C G++++A+ V++E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M +LG+ P+ TY TL+ + + +++ M +G P+L +F+ I L
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+QA M+R GI PD V Y ++I GFCR+G L A K+ ML R + Y T
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMALVQ 388
++ LC++ F A ++ + +++ VP T + L+ G K+ KA N A+V+
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G + A+ +M GC V + N L L + + E+ E+ +
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP- 500
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++F +I+ +C+ G +DKA + M + +KPD +TY TLI F K LW
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ K P+ ++ + + +A L M GI P+ VT N +IKG+CRS
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + S M+ ++P+ Y T+I +E + A+I+ + K+ ++ T
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ +L G + +A ++
Sbjct: 681 NLILNGFCAEGKMQEAEQVL 700
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N + C+ + A ++ EM + G+ PD T+TTLI + KD + L+
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV P+ T+N I +A +L M R I PD ++Y V+ GFC S
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + ML + + PN T+I C+ GD AY + +P +
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+ L++G K KA ++ +++R F+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 88/175 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ V+ FC G+L +A + +M + G++P+++T TLI + +
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ ++N I + + +A L+ M++ G++ + +TYNL++ GFC
Sbjct: 631 SKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE 690
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G + A++V M+ + P+ Y ++I+ + + A+ + +++ VP
Sbjct: 691 GKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + N +IK +C G + KAY + +M G+ PD +Y TLI + K+ E
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N M +G N+ T+N+ + + + +A +++ M GI PD TY+ +I G
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRK 327
++ A + + ML R L+P+ +
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 110/265 (41%), Gaps = 16/265 (6%)
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK----------------FHIQFD 185
H K + SL+A + L R L QA ++ + K F+
Sbjct: 127 HFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSV 186
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++++ + + L + +++ GV + L+ + ++ ++
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+V G N+ T N+ + L R+ + M+ G+ D VTYN +I +CR G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A ++ ++ R + P Y +++ LC+ G ++ A + + ++ P+ T +
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
LL + + + +A I + RR
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRR 391
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +G++ A++ M G + + + N +K S D+ +L ++ I
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP- 640
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+N +I + + L+KA++++ EM+K G++ ++ITY +++ F + + + +
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
M+ G P+ AT++ I V++ +A + M + G+ PD+
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYL---VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D S+N V+ A C G LD A VM +L +P+ I+YTTL+ A D R
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL M G P++ T+ I+ L + A +L+ M GIEP+ V Y+ ++ G+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G + KV+ M GR + P+ +Y +I LC+ G A + ++ P+V
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + L+ N CK ++
Sbjct: 235 VTYNVLI------NSMCKEGSV 250
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 165 DLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
D +A QA L+ + ++ D+ ++ +I+ C+ +D A ++ EM + G++P+V+
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y+ L+ + K R E ++ M +G P++ + I L + +A ++M +M
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G+EP+ VTYN++I C+ G + A + M + + P+ Y T+I L + +
Sbjct: 227 ERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286
Query: 344 LAYIMCKDSMKKNW--VPSVDTISALLEGLKK 373
A + ++ M+ P + T ++++ GL K
Sbjct: 287 EAMALLEEMMQGETRVRPDLMTFNSVIHGLCK 318
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE-KFHIQFD 185
K G ++ A+D +M G + V + N + L+ ++ A L E+ + + ++ D
Sbjct: 246 KEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPD 305
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +FN VI C++G + +A V M + G + +++ + LI + ++ + L +
Sbjct: 306 LMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMD 365
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P+ T+++ I R+ +A + M+ G+EP+ V Y ++K C G
Sbjct: 366 EMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG 425
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A+ +++ M R + Y TMIH + G+ +A KD + + +P T S
Sbjct: 426 MMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 4/307 (1%)
Query: 67 FKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG 126
+ N + V + + ++ L+ D LLE R + +++G
Sbjct: 256 LRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHG 315
Query: 127 --KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
K G ++ A+ M GC+ + + N + L +K + E+ +Q
Sbjct: 316 LCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASS-GLQP 374
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+++I+I FC+M +++A + EM+ G++P+ + Y L+ A L+
Sbjct: 375 DSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLF 434
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M + C + A ++ I A + + M G+ PD VTY++ I F +S
Sbjct: 435 NEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKS 493
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V M +P+ ++ ++I +GD + ++ K+ I
Sbjct: 494 GDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKII 553
Query: 365 SALLEGL 371
S ++ L
Sbjct: 554 STIVTSL 560
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 112/290 (38%), Gaps = 38/290 (13%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ M G + V + ++ L ++ D+ L E+ E I+ ++ ++ +
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCES-GIEPNVVVYSCL 170
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
+ +C+ G + V EM G++PDV+ YT LI + + + + + ++M +G
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL---------------- 296
PN+ T+NV I + + +A L M G++PD VTYN
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290
Query: 297 ---------------------VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
VI G C+ G + A +V + M N + +I
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGG 350
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
L + A + + P T S L+ G K Q +A + ++
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLS 400
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + G A M+ A+ FY + C+ T ++ N+ + +L + + E+ +
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEG 224
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H D +++ +I AFC++G D A ++ EM+ G++P YT L++ F+K N
Sbjct: 225 HCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGA 284
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M + C P++ T+ I+ L R +A MQR G PD + N +I
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-P 359
++G LD A K++ M R +P+ Y T+I L + + MK++ + P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 360 SVDTISALLEGLKKNNQPCKA 380
S T S L++G K N+ KA
Sbjct: 405 SSFTYSILIDGFCKTNRMEKA 425
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 14/269 (5%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLY-GKAGMIKHAMDTFY 139
+ + + + L A R D H ++ R + +M M+ + GKAG + AM F
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFF-YEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQ 359
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH------IQFDIFSFNIVI 193
+M C +V + N +K L ES+ + EVP F I F+++I+I
Sbjct: 360 EMGTLRCIPSVVTYNTIIKALFESKSRAS------EVPSWFERMKESGISPSSFTYSILI 413
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC+ ++KA +++ EM + G P Y +LI A K R ++ L+ +
Sbjct: 414 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+ + V I+HL R A + M + G PD YN ++ G R+G LD A
Sbjct: 474 SSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 533
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
M +P+ Y +++ L ++ D
Sbjct: 534 MRRMQEHGCIPDINSYNIILNGLQKQEDL 562
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 39/310 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G A+ +M G + T K + + + D+ + E+ ++ +
Sbjct: 240 FCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQY-CRP 298
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++ +I+ + G +D+AY EMQ+ G +PD I +I+ K R + L+
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLF 358
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C P++ T+N I+ L +K R+ + M+ GI P TY+++I GFC+
Sbjct: 359 QEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 418
Query: 304 SGHLDMAKKVYSAMLGRRLMP-----------------------------------NRKI 328
+ ++ A + M + P + ++
Sbjct: 419 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRV 478
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI +L + G + A M + K P V +AL+ GL + +A + M +Q
Sbjct: 479 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 538
Query: 389 RR--VPHFSS 396
+P +S
Sbjct: 539 EHGCIPDINS 548
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
I A + F +M G + S ++ + VL + L E+ E+ I D +
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYT 436
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I FC G L A + EM G DV+TY T ++ K + L+N MV +
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ TF I+ +A L M R ++PD+VTYN +I GFC++G + A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K+++ M+ + ++P+ Y T+++ C G A +C ++K P++ T + L++G
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616
Query: 371 LKKNNQPCKA 380
++ KA
Sbjct: 617 YCRSGDMPKA 626
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 37/298 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A + + ++ G + V +LN + L + R + + FL ++ K + DI
Sbjct: 234 RTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK-GVFADI 292
Query: 187 FSFNIVIKAFCEMGILDKAYL-----------------------------------VMVE 211
++N +I A+C G++++A+ V++E
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M +LG+ P+ TY TL+ + + +++ M +G P+L +F+ I L
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+QA M+R GI PD V Y ++I GFCR+G L A K+ ML R + Y T
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMALVQ 388
++ LC++ F A ++ + +++ VP T + L+ G K+ KA N A+V+
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G + A+ +M GC V + N L L + + E+ E+ +
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP- 500
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++F +I+ +C+ G +DKA + M + +KPD +TY TLI F K LW
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ K P+ ++ + + +A L M GI P+ VT N +IKG+CRS
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A + S M+ ++P+ Y T+I +E + A+I+ + K+ ++ T
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ +L G + +A ++
Sbjct: 681 NLILNGFCAEGKMQEAEQVL 700
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N + C+ + A ++ EM + G+ PD T+TTLI + KD + L+
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV P+ T+N I +A +L M R I PD ++Y V+ GFC S
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A + ML + + PN T+I C+ GD AY + +P +
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFS 395
+ L++G K KA ++ +++R F+
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFN 676
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 88/175 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+ V+ FC G+L +A + +M + G++P+++T TLI + +
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ G P+ ++N I + + +A L+ M++ G++ + +TYNL++ GFC
Sbjct: 631 SKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE 690
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G + A++V M+ + P+ Y ++I+ + + A+ + +++ VP
Sbjct: 691 GKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ + N +IK +C G + KAY + +M G+ PD +Y TLI + K+ E
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N M +G N+ T+N+ + + + +A +++ M GI PD TY+ +I G
Sbjct: 663 ILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGH 722
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRK 327
++ A + + ML R L+P+ +
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 110/265 (41%), Gaps = 16/265 (6%)
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK----------------FHIQFD 185
H K + SL+A + L R L QA ++ + K F+
Sbjct: 127 HFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSV 186
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++++ + + L + +++ GV + L+ + ++ ++
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+V G N+ T N+ + L R+ + M+ G+ D VTYN +I +CR G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A ++ ++ R + P Y +++ LC+ G ++ A + + ++ P+ T +
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
LL + + + +A I + RR
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRR 391
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +G++ A++ M G + + + N +K S D+ +L ++ I
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP- 640
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+N +I + + L+KA++++ EM+K G++ ++ITY +++ F + + + +
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
M+ G P+ AT++ I V++ +A + M + G+ PD+
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D ++N++I C+ G L AY++ ++M G++ D +TYT LI A + R
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+++ MV G P++ T+ + I + + A M G+EP+EVTYN+++
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G + A + + ML R L+PN+ Y +I C+EG++ A + + +K P
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDH 685
Query: 362 DTISALLEGLKKNN 375
T +AL +G + +
Sbjct: 686 CTHNALFKGFGEGH 699
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R+L ++ F E+ K ++ D F++N I A +G + A+ + EM G+ D +T
Sbjct: 454 RNLAMVRIFFDEMLSK-GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVT 512
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI K + LW MV G + T+ I + R +A + M
Sbjct: 513 YNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMV 572
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G+ P VTY + I +CR G+L +A + ML + PN Y ++H LC+ G
Sbjct: 573 ASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEG 370
AY + +++ VP+ T + L++G
Sbjct: 633 SAYQHFHEMLERGLVPNKYTYTLLIDG 659
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHL--YGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFH 181
+ KAG + A+ DM GC + N + L +L KA Q L+++ +
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQ--LVDI-MRLS 295
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ F++N +I ++KA +++EM+ G+ P V+TY TLI +K E
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++ M KG P+L T+N I QA L G ++R G+ P +TYN++I G+
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
CR G L+ A+++ M +P+ Y +++ C + + I + + K P
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A+ F D+ G TV + N + DL+ + E+ E+ +
Sbjct: 380 YCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLP- 438
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C + L + EM G++PD Y T ISA L
Sbjct: 439 DVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLR 498
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G + T+NV I L A L M G+ D VTY +I C
Sbjct: 499 EEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCER 558
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L AK ++ M+ L P+ Y IH C+ G+ LAY + +++ P+ T
Sbjct: 559 GRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTY 618
Query: 365 SALLEGL 371
+ L+ L
Sbjct: 619 NVLMHAL 625
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 43/282 (15%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESR---DLKAIQAFLMEVPEKFHIQF 184
A + F +M +G VK N L+VL ++ D++A+ + ++++ ++
Sbjct: 172 ASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQL----GVEP 227
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVM----------------------------------- 209
IF++N ++ +FC+ G +D+A ++
Sbjct: 228 SIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQ 287
Query: 210 -VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
V++ +L K TY LI+ + E L M +G P + T+N I L
Sbjct: 288 LVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFK 347
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ A M+ G+ PD +TYN +I G+C++G+L A ++ + L P
Sbjct: 348 TGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLT 407
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y +I C+ GD A + ++ +++ +P V T + L+ G
Sbjct: 408 YNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ I I +C G L AY +M + GV+P+ +TY L+ A + R E ++
Sbjct: 580 VVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFH 639
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ +G PN T+ + I + A +L M + GI PD T+N + KGF
Sbjct: 640 EMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGH 699
Query: 306 HLDMAKKVYSAMLG 319
D + + + +LG
Sbjct: 700 MYDAVQYLENVVLG 713
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M R G+ P N V++ + D + VYS ML + P+ Y T++ C+ G
Sbjct: 185 MARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGR 244
Query: 342 FNLAYIMCKD--SMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ--RRVPHFSSN 397
+ A + KD + +P+ T + ++ GL + + KA ++ +++ ++ F+ N
Sbjct: 245 MDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYN 304
Query: 398 QL 399
L
Sbjct: 305 PL 306
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 9/266 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
+ K A F +M G + + N+ L V ++R + E+ E+ + +
Sbjct: 239 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVT 297
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I ++ + G+L++A + EM+ G+KPDV+TYTTLIS + + + ++ MV
Sbjct: 298 YNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 357
Query: 249 CKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRS 304
GC PNL T+N I+ H V + ++M + F G PD VT+N ++ F ++
Sbjct: 358 RNGCKPNLCTYNALIKMHGVRGKFP----EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 413
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G V+ M +P R Y ++I + G F+LA + K M+ P V T
Sbjct: 414 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 473
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+A+L L + + +A + A ++ R
Sbjct: 474 NAVLSALARGGRWEQAEKLFAEMEER 499
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKLF A R ++Y++ + A A+R D ++ L + S +
Sbjct: 490 EKLF----AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 545
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++++ K + A F ++ C + LNA + + ++R ++ ++ L + E
Sbjct: 546 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES- 604
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I ++N ++ + +G +K ++ E++ GV+PD +Y T+I A+ + + +
Sbjct: 605 AINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEA 664
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L++ M C G P++ T+N+ ++ V+ +A +L+ M G +P+E TYN +++G
Sbjct: 665 SRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEG 724
Query: 301 FCRSGHLDMAK 311
+CR+G L AK
Sbjct: 725 YCRNGKLTDAK 735
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 100 EHLLEHQKSLPQ-----GRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKS 152
+ LLE +L Q G + + ++ G +AG I A+ + +M GCK + +
Sbjct: 308 DGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCT 367
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEM 212
NA +K+ + A E + DI ++N ++ F + G+ + V EM
Sbjct: 368 YNALIKMHGVRGKFPEMMAVFDEFRSAGFVP-DIVTWNTLLAVFGQNGLDSEVSGVFKEM 426
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+K G P+ TY +LIS++ + ++ ++ M+ G +P+++T+N + L R
Sbjct: 427 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 486
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
QA KL M+ +PDE +Y+ ++ + + LD K + + R+ P+ + +T+
Sbjct: 487 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 546
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ + + A + +K ++ ++A++ KN K I++L++
Sbjct: 547 VLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 606
Query: 393 HFSSNQLSAFKSILSK 408
+ S+ ++ + S+
Sbjct: 607 NLSAATYNSLMHMYSR 622
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 8/236 (3%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
++H G + L A++V+ + L A L P D ++ ++ AF
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP-----DAGAYTALVSAFSRA 167
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--EIGNGLWNLMVCKGCFPNLA 257
G A V M GV+P ++TY ++ + K P E+ L M G P+
Sbjct: 168 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE-LVASMKEHGVAPDRY 226
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N I + +A ++ M+ G EPD+VT+N ++ + ++ D A +V M
Sbjct: 227 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 286
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ Y ++I ++G A + ++ K P V T + L+ GL +
Sbjct: 287 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDR 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/319 (17%), Positives = 116/319 (36%), Gaps = 36/319 (11%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G+ AM + M G V + NA L L + + E+ E+ +
Sbjct: 445 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER-DCKP 503
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +S++ ++ A+ LDK + ++ ++P TL+ K N +
Sbjct: 504 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 563
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF------------------- 285
+ K C ++ N + R + K++ LM+
Sbjct: 564 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 623
Query: 286 ----------------GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
G+ PD +YN VI + R G + A +++S M L P+ Y
Sbjct: 624 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 683
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ F A + + + + P+ T ++++EG +N + A ++ + +
Sbjct: 684 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ 743
Query: 390 RVPHFSSNQLSAFKSILSK 408
P +S + +++K
Sbjct: 744 LHPGYSKQEQQNLFEVIAK 762
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 2/232 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M ++G K V + N +K L + L+ L ++P + + D +F +++ + E G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP-SYGLVPDEKTFTTIMQGYIEEG 238
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG-NGLWNLMVCKGCFPNLATF 259
LD A + +M + G ++ ++ F K+ R E N + + G FP+ TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N + L A ++M +M + G +PD TYN VI G C+ G + A + M+
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMIT 358
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R PN Y T+I LC+E A + + K +P V T ++L++GL
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ ++ L +R+ + E+ K + D F++N++I + C G LD+A ++
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M+ G VITY TLI F K N+ +++ M G N T+N I L
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
RR A++LM M G +PD+ TYN ++ FCR G + A + AM P+ Y
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
T+I LC+ G +A + + K + + +++GL + + +A
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEA 629
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N VI C++G + +A + +M P+ +TY TLIS K+N+ E L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG P++ TFN IQ L R A +L M+ G EPDE TYN++I C
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP--SVD 362
G LD A + M + Y T+I C+ A + D M+ + V SV
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF-DEMEVHGVSRNSV- 506
Query: 363 TISALLEGLKKNNQPCKANTIM 384
T + L++GL K+ + A+ +M
Sbjct: 507 TYNTLIDGLCKSRRVEDASQLM 528
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 154/346 (44%), Gaps = 25/346 (7%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+++ D +LF + +E+ + RL + FD + +LE K+
Sbjct: 54 LDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN-- 111
Query: 111 QGRREGFIMRIMMLYGKA---------GMIKHAMDTFY---DMHLYGCKRTVKSLNAALK 158
G G ++++ A G++ +D F D H Y N L
Sbjct: 112 SGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFY---------NRMLN 162
Query: 159 VLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK 218
+L + +LK ++ ++ + I+ D+ +FN++IKA C L A L++ +M G+
Sbjct: 163 LLVDGNNLKLVEIAHAKM-SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV 221
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-NK 277
PD T+TT++ + ++ + + MV GC + + NV + + R A N
Sbjct: 222 PDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ + + G PD+ T+N ++ G C++GH+ A ++ ML P+ Y ++I LC
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ G+ A + ++ P+ T + L+ L K NQ +A +
Sbjct: 342 KLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 5/271 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ M C + N + L + ++ L V I D+
Sbjct: 342 KLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDV 400
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I+ C A + EM+ G +PD TY LI + + + +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC ++ T+N I + +A ++ M+ G+ + VTYN +I G C+S
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ M+ P++ Y +++ + C+ GD A + + P + T
Sbjct: 521 VEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 367 LLEGLKKNNQPCKANTIMALVQRR----VPH 393
L+ GL K + A+ ++ +Q + PH
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGIALTPH 611
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 9/269 (3%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ F +M GC+ + N + L L L ++ E + ++N +I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLI 477
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC+ + +A + EM+ GV + +TY TLI K R E + L + M+ +G
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + H +A ++ M G EPD VTY +I G C++G +++A K+
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 314 YSA--MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN-WVPSVDTISALLEG 370
+ M G L P+ Y +I L ++ A + ++ +++N P + + G
Sbjct: 598 LRSIQMKGIALTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRG 655
Query: 371 LKKNNQPCK--ANTIMALVQRR-VPHFSS 396
L P + + ++ L+++ VP FSS
Sbjct: 656 LCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A+ DM YG K+ ++ E DL ++ E F +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVE-FGCSWSN 259
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQ-KLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S N+++ FC+ G ++ A + EM + G PD T+ TL++ K + + +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M+ +G P++ T+N I L +A + + M P+ VTYN +I C+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A ++ + + ++P+ + ++I LC + +A + ++ K P T +
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 366 ALLEGL 371
L++ L
Sbjct: 440 MLIDSL 445
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ VI C++G LD A L +M G+ P+V+ YT+LI A ++ E L +
Sbjct: 219 NYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI 278
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +G PN+ FN + L + R ++ KL L+ G+ PD +TY+ +I G+C +G +
Sbjct: 279 LDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKM 338
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISA 366
D A K+ + M+ L P+ Y T+I+ C+ A + K+ M+ N V P + T +
Sbjct: 339 DGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKE-MESNGVNPDIITYNI 397
Query: 367 LLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+L GL + + A + A + +LS + IL
Sbjct: 398 ILHGLFRTRRTAAAKELYARITESGTQL---ELSTYNIIL 434
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 96/185 (51%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N ++ +C G +KA + +M G++PDV+TY +L+ K+ + +++
Sbjct: 78 FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDS 137
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +G P++ T+ + +K + + L+ LM + G++ D +N++I + +
Sbjct: 138 MVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEK 197
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D V+S M + L PN Y+T+I LC+ G + A + + + K P+V ++
Sbjct: 198 VDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTS 257
Query: 367 LLEGL 371
L+ L
Sbjct: 258 LIHAL 262
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ ++N ++ C+ G +A + M K G+KPD+ TY TL+ + +
Sbjct: 108 IEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMH 167
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L LMV G + FN+ I + + + + M++ G+ P+ V Y VI G
Sbjct: 168 DLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGL 227
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+ G LD A + M+ + L PN +Y ++IH LC + A + + + + P++
Sbjct: 228 CKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNI 287
Query: 362 DTISALLEGLKKNNQPCKANTIMALV 387
+ +L+ L K + ++ + L+
Sbjct: 288 VFFNTILDSLCKEGRVIESKKLFDLL 313
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 69/125 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I +C G +D A ++ M +G+KPD +TY+TLI+ + K NR E L+
Sbjct: 321 DVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALF 380
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P++ T+N+ + L RR+ A +L + G + + TYN+++ F ++
Sbjct: 381 KEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKT 440
Query: 305 GHLDM 309
L M
Sbjct: 441 NSLMM 445
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 39/203 (19%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+N +I + G +DKAY+ EM V PD +TY ++I+A K + +
Sbjct: 10 DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+MV CF TYN ++ G+C S
Sbjct: 70 TVMVMPNCF---------------------------------------TYNSIMHGYCSS 90
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A ++ M + P+ Y +++ YLC+ G A + +K+ P + T
Sbjct: 91 GQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTY 150
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
LL G + + ++AL+
Sbjct: 151 GTLLHGYASKGALVEMHDLLALM 173
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM F M G V + + L + + + E+ ++ I +I
Sbjct: 229 KLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQ-GINPNI 287
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN ++ + C+ G + ++ + + +GV PDVITY+TLI + + + L
Sbjct: 288 VFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTG 347
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P+ T++ I R A L M+ G+ PD +TYN+++ G R+
Sbjct: 348 MVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRR 407
Query: 307 LDMAKKVYS 315
AK++Y+
Sbjct: 408 TAAAKELYA 416
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P++ ++N I L + +A M + PD VTYN +I ++ +D A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY----IMCKDSMKKNWVPSVDTISAL 367
+V + M+ MPN Y +++H C G A MC D ++ P V T ++L
Sbjct: 67 EVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE----PDVVTYNSL 118
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
++ L KN + +A I + +R
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKR 141
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 9/259 (3%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLME 175
F+ I G A IK F M G +V + N+ L VL R A Q F E
Sbjct: 242 FVFSIEKKSGGAESIK----VFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLF-DE 296
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ + + + D ++FNI+I+ FC ++D+ + EM + PDV+TY TL+ +
Sbjct: 297 MLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAG 356
Query: 236 RPEIGNGLWNLMVCKG--CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ +I + + MV K PN+ T+ I+ K+ +A L+ M G++P+++T
Sbjct: 357 KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT 416
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
YN +I+G C + LD K++ M+G +P+ T+I C G A+ + +
Sbjct: 417 YNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 476
Query: 353 MKKNWVPSVDTISALLEGL 371
+ P T S L+ L
Sbjct: 477 SELRVQPDSATYSVLVRSL 495
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+ +M G K + N ++ L E++ L I+ L + D + N
Sbjct: 395 MAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLN 454
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+IKA C MG L++A+ V +M +L V+PD TY+ L+ + + ++ + K
Sbjct: 455 TLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEK 514
Query: 251 -------GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
GC P +A +N ++L + ++ +A ++ + + G + D +Y +I G CR
Sbjct: 515 EILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCR 573
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G + + ML R +P+ + Y MI L ++GD LA+ + +K + +P+
Sbjct: 574 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 633
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
++L L + + + N ++ R+ + S Q AF +I
Sbjct: 634 FHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQDKAFMTI 675
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR-RLMPNRK 327
K ++ K+ M+ G+ P VT+N ++ + G MAK+++ ML + P+
Sbjct: 249 KSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTY 308
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+ +I C + + K+ + P V T + L++GL + + A+ ++ +
Sbjct: 309 TFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGM 368
Query: 388 QRRVPHFSSNQLS 400
++ P+ S N ++
Sbjct: 369 VKKSPNLSPNVVT 381
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 6/256 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK--VLTESRDLKAIQAFLMEVPEKFHIQF 184
K G I A D M + G + V + NA + L D +A++ F V +
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD-EAVKVFDTMVHNGY--AP 347
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I +C++ +DKA + EM + + P+ +TY TL+ + R + L+
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHV-GRLQDAIALF 406
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV G P+LAT+ + + +L K +A L+ ++ ++PD Y +VI G CR+
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A+ ++S + + L PN + Y MI+ LC+ G + A + + P T
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526
Query: 365 SALLEGLKKNNQPCKA 380
+ + +GL +N + +A
Sbjct: 527 NTITQGLLQNKEALRA 542
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 111/215 (51%), Gaps = 4/215 (1%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F I D+++ NI+I +FC + L A+ V+ ++ KLG +PD T+TTLI + +
Sbjct: 96 DSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK- 154
Query: 238 EIGNG--LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
IG+ L++ M+ +G PN+ T+ I L + A +L+ M++ +PD V Y
Sbjct: 155 -IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 213
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I C+ + A ++S M+G+ + P+ Y ++IH LC ++ + +
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+P V S +++ L K + +A+ ++ ++ R
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 308
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+ E+ + Q D+ + +I + C+ + +A+ + +M G+ PD+ TYT+LI +
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 255
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ L N M+ P++ F+ + L + + +A+ ++ +M G+EP+ V
Sbjct: 256 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 315
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN ++ G C +D A KV+ M+ PN Y T+I+ C+ + A + ++
Sbjct: 316 TYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 375
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+K +P+ T + L+ + +AL V H L+ ++ +L
Sbjct: 376 CQKELIPNTVTYNTLMHXCHVG----RLQDAIALFHEMVAHGQIPDLATYRILL 425
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E + A+ F + E F Q ++ ++ +I C++G + A ++ M++ +PDV
Sbjct: 152 EGKIGDALHLFDKMIGEGF--QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 209
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+ YT++I + KD + L++ MV +G P++ T+ I L N L+
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M I PD V ++ V+ C+ G + A V M+ R + PN Y ++ C + +
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 329
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ A + + + P+V + + L+ G K
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 361
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 1/230 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M +G V +LN + L + L ++ + H Q D +F +I+ C G
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGH-QPDTATFTTLIRGLCVEG 153
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + +M G +P+V+TY TLI+ K L M C P++ +
Sbjct: 154 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 213
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L R+ +A L M GI PD TY +I C + + M+
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++MP+ I+ T++ LC+EG A+ + + + P+V T +AL++G
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 323
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A M + P + + L+++ K + L N M G P++ T N+
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + R A ++ + + G +PD T+ +I+G C G + A ++ M+G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
PN Y T+I+ LC+ G+ N A + + + N P V +++++ L K+ Q +A
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 9/251 (3%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQ 111
L++E D + ++F HN N ++ ++ +R D +L E QK L
Sbjct: 326 LQSEMD--EAVKVFDTMVHNGYA-PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 382
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
+M G ++ A+ F++M +G + + L L + L A
Sbjct: 383 NT---VTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 439
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
L + E ++ DI + IVI C G L+ A + + G++P+V TYT +I+
Sbjct: 440 LLKTI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + N L+ M GC P+ T+N Q L+ + + +A +L+ M G D
Sbjct: 499 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADV 558
Query: 292 VTYNLVIKGFC 302
T L+++ C
Sbjct: 559 STTTLLVEMLC 569
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ LD+A ++ ++ + PD+ YT +I + E ++
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ + KG PN+ T+ + I L + +ANKL M G PD TYN + +G ++
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
A ++ ML R + ++ LC +
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 45/95 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I+I C G+LD+A + +EM G PD TY T+ ++ L
Sbjct: 487 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 546
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
M+ +G +++T + ++ L + + +++
Sbjct: 547 QEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 101/189 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N++IK FC+ G LD+A + + ++ G + DVI++ ++ + R L
Sbjct: 240 DVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLL 299
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KGCFP++ TFN+ I L K +A ++ +M + G P+ ++N +I+GFC
Sbjct: 300 ATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNR 359
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A + M+ R P+ Y ++ LC++G + A ++ K PS+ +
Sbjct: 360 KGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISY 419
Query: 365 SALLEGLKK 373
+ +++GL K
Sbjct: 420 NTVIDGLLK 428
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K + AM F +M GCK V + N +K + L FL ++P + Q D+
Sbjct: 218 KESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPS-YGCQSDV 276
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S N+++++ C G A ++ M + G P V+T+ LI+ + + +
Sbjct: 277 ISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEM 336
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN +FN IQ N++ +A + + +M G PD VTYN+++ C+ G
Sbjct: 337 MPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGK 396
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A + S + + P+ Y T+I L + G LA + ++ K P + T ++
Sbjct: 397 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTS 456
Query: 367 LLEGLKKNNQ 376
++ GL + +
Sbjct: 457 VVGGLSREGK 466
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM M GC +V + N + L + L L +P+ H + SFN +I
Sbjct: 295 AMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP-NSRSFNPLI 353
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
+ FC +D+A + M G PD++TY L++A KD + + + + + KGC
Sbjct: 354 QGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 413
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+L ++N I L+ ++ A +L+ M G++PD +T V+ G R G + A K
Sbjct: 414 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKF 473
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + G + PN IY +++ LC+ +LA D + P+ + + L++G+
Sbjct: 474 FHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGI 531
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIF 187
G++ A++ M +G +S N ++ + + +AI+ + V + DI
Sbjct: 325 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP--DIV 382
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI++ A C+ G +D A +++ ++ G P +I+Y T+I K + E+ L M
Sbjct: 383 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 442
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P+L T + L + + +A K ++ FGI+P+ YN ++ G C++
Sbjct: 443 CYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQT 502
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+A M+ P Y T+I + EG
Sbjct: 503 SLAIDFLVDMVANGCKPTEASYTTLIKGITYEG 535
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 94/184 (51%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ V+ + C+ G L +A V+ + PDV+T T LI A K++ L+N M
Sbjct: 173 TYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEM 232
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KGC P++ T+NV I+ + R +A + + +G + D +++N++++ C G
Sbjct: 233 RGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRW 292
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A K+ + ML + P+ + +I++LCQ+G A + + K P+ + + L
Sbjct: 293 MDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPL 352
Query: 368 LEGL 371
++G
Sbjct: 353 IQGF 356
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQ 183
Y K+G I+ A+ + + +A L L + LK A+Q ++ K +
Sbjct: 149 YCKSGEIEEALRVLDHTSV---APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYP- 204
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ + ++I A C+ + +A + EM+ G KPDV+TY LI F K+ R +
Sbjct: 205 -DVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ GC ++ + N+ ++ L + R A KL+ M R G P VT+N++I C+
Sbjct: 264 LKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQ 323
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G L A V M PN + + +I C + A + + + P + T
Sbjct: 324 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVT 383
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+ LL L K+ + A I++ + +
Sbjct: 384 YNILLTALCKDGKVDDAVVILSQLSSK 410
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+M + E+ D S+N++I A+C+ G +++A V+ V P+ TY ++ +
Sbjct: 126 IMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVL---DHTSVAPNAATYDAVLCSLC 182
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + + + + C+P++ T V I + QA KL M+ G +PD V
Sbjct: 183 DRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVV 242
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN++IKGFC+ G LD A + + + ++ LC G + A +
Sbjct: 243 TYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM 302
Query: 353 MKKNWVPSVDTISALL 368
++K PSV T + L+
Sbjct: 303 LRKGCFPSVVTFNILI 318
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +I+ FC++G A +M +++ G D +Y LI+A+ K EI L
Sbjct: 103 DVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSG--EIEEAL- 159
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ PN AT++ + L ++ + QA +++ + PD VT ++I C+
Sbjct: 160 RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKE 219
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+ A K+++ M G+ P+ Y +I C+EG + A I K
Sbjct: 220 SGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLK 265
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ + GC ++ S N + L + + L E+ K ++ D+
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK-GLKPDL 451
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ V+ G + +A ++ G+KP+ Y +++ K + +
Sbjct: 452 ITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVD 511
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
MV GC P A++ I+ + + + +A+KL
Sbjct: 512 MVANGCKPTEASYTTLIKGITYEGLAEEASKL 543
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 6/255 (2%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL-NAALKVLTESRDLKAIQAFLMEV 176
++R + + GK G H D D T +L N KV S ++ +++
Sbjct: 132 LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---- 187
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E+ + Q D+ + +I + C+ + +A+ + +M G+ PD+ TYT+L+ A
Sbjct: 188 -EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
+ L N MV P++ F+ + L + + +A++++ +M + G+EPD VTY
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
++ G C +D A KV+ M+ + P+ Y T+I+ C+ + A + ++ +K
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366
Query: 357 WVPSVDTISALLEGL 371
W+P T + L+ GL
Sbjct: 367 WIPDTKTYNTLMHGL 381
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+A++ F M V + F D+ S+ +I +C++ +DKA + EM + PD TY T
Sbjct: 319 EAVKVFDMMVRKGF--APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L+ R + L++ MV +G P+L T+++ + L +A L+ ++
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
+ PD YN++I G CR+G L+ A+ ++S + + L P+ Y MIH LC+ G N A
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 496
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + + P T + + G +NN+ +A
Sbjct: 497 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ F + ++++ NI+I +FC + + A+ V+ ++ KLG +PD T+TTLI + +
Sbjct: 83 DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI 142
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ M+ +G PN+ T+ I L + A +L+ M++ +PD V Y +
Sbjct: 143 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 202
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I C+ + A ++S M+G+ + P+ Y +++H LC ++ + +
Sbjct: 203 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 262
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
+P V S +++ L K + +A+ I+ ++QR V
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ D+ ++ ++ C +D+A V M + G PDVI+YTTLI+ + K ++ +
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M K P+ T+N + L + R A L M G PD VTY++++
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ HL+ A + A+ L P+ ++Y +I +C+ G+ A + + K PSV
Sbjct: 417 CKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + ++ GL K +AN +
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKL 498
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K Q D +F +I+ C G + +A + +M G +P+V+TY TLI+ K
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L M C P++ + I L R+ +A L M GI PD TY ++
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C + + M+ +++P+ I+ T++ LC+EG A+ + +++
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298
Query: 359 PSVDTISALLEG 370
P V T + L++G
Sbjct: 299 PDVVTYTTLMDG 310
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N ++ C +G L A + EM G PD++TY+ L+ + K+ E L
Sbjct: 370 DTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL 429
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ P++ +N+ I + A L + G+ P TYN++I G C+
Sbjct: 430 KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKR 489
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A K++ M G P+ Y T+ Q + A + ++ + + + V T
Sbjct: 490 GLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTT 549
Query: 365 SALLEGLKKNN 375
+ L+E L +
Sbjct: 550 TLLVEMLSDDG 560
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKR----TVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
Y K I AM F +M C++ K+ N + L L+ A E+ +
Sbjct: 346 YCKIHKIDKAMYLFEEM----CRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+ +++I++ + C+ L++A ++ ++ + PD+ Y +I + E
Sbjct: 402 QMP-DLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAA 460
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ + KG P++ T+N+ I L + +ANKL M PD TYN + +G
Sbjct: 461 RDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG 520
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
F ++ A ++ ML R + ++ L +G
Sbjct: 521 FLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M FG+ P+ T N++I FC + A V + +L P+ + T+I LC EG
Sbjct: 82 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + + + P+V T L+ GL K
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 7/210 (3%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I ++S+N +I C+ G + A L+ EM G+KP V TYT+LIS + KD
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L++ M KG PN TF I L + +A+KL M I P+EVTYN++I+G
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G+ A ++ M+ + L P+ Y+ +I LC G + A D K+
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610
Query: 362 DTISALLEGLKKNNQPCKANTIM-ALVQRR 390
+ALL+G CK I ALV R+
Sbjct: 611 LCYTALLQGF------CKEGRIKEALVARQ 634
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 1/236 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC ++ + N + L +S+ + + EK ++ D+ ++ ++ C + +
Sbjct: 255 GCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEK-GLKADLVTYCTLVLGLCRIQEFEV 313
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
+M EM +LG P + LI K E L N + G PNL +N I
Sbjct: 314 GMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMIN 373
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
L + +A L +M G+ P++VTY ++I GF R LD+A ++ M+ +
Sbjct: 374 SLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
Y +MI+ C+ G +A ++ K+ + K P+V T ++L+ G K+ KA
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKA 489
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 173 LMEVPEKFH---IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
L E+ + H +Q D + I+I F + G L KA+ M G P+ +TYT L++
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722
Query: 230 AFYK------------------------------DNRPEIGN-----GLWNLMVCKGCFP 254
+K D+ + GN L N M+ +G F
Sbjct: 723 GLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFA 781
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N T+N+ I+ + +A KL+ +M G+ PD +TY+ I +C+ G++D A ++
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
ML R L P+R ++ +IH C G+ + A + D M + P+ T +L+
Sbjct: 842 ECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G+ + A F M G TV S N+ + + +K + E+ +K ++
Sbjct: 410 FGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK-GLKP 468
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++ +I +C+ G++ KA+ + EM G+ P+ +T+T LI + N+ + L+
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLF 528
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV PN T+NV I+ + + +A +L+ M + G+ PD TY +I G C +
Sbjct: 529 DEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCST 588
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + AK+ + + + + Y ++ C+EG A + ++ + + + +
Sbjct: 589 GRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSY 648
Query: 365 SALLEGLKKNN 375
+ L+ G N
Sbjct: 649 AVLISGALNQN 659
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F +N +I + C+ G L++A L+ M + G+ P+ +TYT LI F + + ++ +
Sbjct: 364 NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYF 423
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ G + ++N I + A L M G++P TY +I G+C+
Sbjct: 424 NKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKD 483
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A K+Y M G+ + PN + +I LCQ A + + ++ +P+ T
Sbjct: 484 GLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTY 543
Query: 365 SALLEGLKKNNQPCKA 380
+ L+EG + +A
Sbjct: 544 NVLIEGHCREGNTTRA 559
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 97/192 (50%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+ +MG ++ A+ ++ ++ KLGV P++ Y ++I++ K + E L+++M +G
Sbjct: 336 LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERG 395
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN T+ + I + + A M GI +YN +I C+ G + MA+
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++ M+ + L P Y ++I C++G A+ + + K P+ T +AL+ GL
Sbjct: 456 LLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGL 515
Query: 372 KKNNQPCKANTI 383
+ N+ +A+ +
Sbjct: 516 CQINKMAEASKL 527
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 37/284 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G++ A +++M G + A + L + + E+ E I
Sbjct: 480 YCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVE-LKILP 538
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY-------------------- 224
+ ++N++I+ C G +A+ ++ EM K G+ PD TY
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598
Query: 225 ---------------TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
T L+ F K+ R + MV +G +L ++ V I +N+
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ 658
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+L+ M G++PD V Y ++I GF +SG+L A + + M+G +PN Y
Sbjct: 659 NDRILF-ELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTY 717
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+++ L + G N A ++ K + +P+ T L+ L K
Sbjct: 718 TALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTK 761
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 93/186 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
F+++I+ + + + LV+ M+ G+ P+V T + L++A + + L++ +
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G P+ + V ++ L + +A +++ + G VTYN+ I G C+S +
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A +V ++ + L + Y T++ LC+ +F + M + ++ +VPS +S L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336
Query: 368 LEGLKK 373
+EGL K
Sbjct: 337 IEGLIK 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%)
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
GVKPD YT ++ + + N GC ++ T+NV I L +R W+A
Sbjct: 220 GVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEA 279
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
++ + G++ D VTY ++ G CR ++ ++ M+ +P+ +I
Sbjct: 280 VEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEG 339
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
L + G A+ + K VP++ ++++ L K + +A + +++ R
Sbjct: 340 LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER 394
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 60/128 (46%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
F + + F++ IQH V +R ++ LM+ +G+ P+ T + ++ R +
Sbjct: 152 FSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLE 211
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
++ ++ + P+ IY ++ LC+ DFN A + + S+ T + + GL
Sbjct: 212 LFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLC 271
Query: 373 KNNQPCKA 380
K+ + +A
Sbjct: 272 KSKRVWEA 279
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
LKV+ +S L ++ E+ I+ D ++I+I C+ G LD A+ + EM+
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G K D+I YTTLI F R + G L M+ + P++ F+ I V + + +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN---------- 325
+L M + GI PD VTY +I GFC+ LD A + M+ + PN
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 326 --------------RKI-----------YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
RK+ Y T+I C+ G +A + ++ + + P
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + LL+GL N +P KA I +++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G K + ++ + L ++ ++ I D+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDV 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+ +I F + G L +A + EM + G+ PD +TYT+LI F K+N+ + N + +L
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 247 MVCKGCFPNLATFNVRI-----------------------------------QHLVNKRR 271
MV KGC PN+ TFN+ I Q +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A +L M + PD V+Y +++ G C +G + A +++ + ++ + IY
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
+IH +C + A+ + K P V T + ++ GL K +A+
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 102/205 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FNI+I +C+ ++D + +M GV D +TY TLI F + + E+ L+
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + P++ ++ + + L + +A ++ +++ +E D YN++I G C +
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P+ K Y MI LC++G + A ++ + + P+ T
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ L+ K+ ++ ++R
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKR 590
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 3/305 (0%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
S + + D ++ E +S P+ R F R+ + + +D M L G
Sbjct: 46 SGIVDIKEDDAVDLFQEMTRSRPRPRLIDF-SRLFSVVARTKQYDLVLDLCKQMELKGIA 104
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ +L+ + R L + + ++ K + D +F+ +I C G + +A
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ M ++G KP +IT L++ + + L + MV G PN T+ ++ +
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++ A +L+ M+ I+ D V Y+++I G C+ G LD A +++ M + +
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI-MAL 386
IY T+I C G ++ + +D +K+ P V SAL++ K + +A + +
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 387 VQRRV 391
+QR +
Sbjct: 344 IQRGI 348
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N ++ C G + A L++ M + G +P+ +TY ++ K + + L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M + + +++ I L A L M+ G + D + Y +I+GFC +G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D K+ M+ R++ P+ + +I +EG A + K+ +++ P T +
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 366 ALLEGLKKNNQPCKANTIMALV 387
+L++G K NQ KAN ++ L+
Sbjct: 357 SLIDGFCKENQLDKANHMLDLM 378
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 17/244 (6%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F E EK ++ DI +NI+I C +D A+ + + GVKPDV TY
Sbjct: 475 KALEIF--EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I K + L+ M G PN T+N+ I+ + + + ++ KL+ ++R G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL-- 344
D T + R ML P+ + T++ C E + ++
Sbjct: 593 FSVDASTLRFALSTLAR-------------MLKAGHEPDVFTFTTLLRPFCLEENASVYD 639
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKS 404
A + K+ + P+V T + +++GL N + ++ + R ++ S F S
Sbjct: 640 APTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFIS 699
Query: 405 ILSK 408
L K
Sbjct: 700 GLCK 703
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
A + A D F + L G K VK+ N + L + L ++ E H +
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-SPNGC 563
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++NI+I+A G K+ ++ E+++ G D T +S + M
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR-------------M 610
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRS--WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ G P++ TF ++ + + + A L M+ G +P+ VTYN VIKG
Sbjct: 611 LKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGN 670
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ V M R PN T I LC++
Sbjct: 671 MISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L + D++A L E+ K ++ +++++N +I C+ G L++A +M EM+ G +
Sbjct: 472 LCKQGDVRAANELLHEMCNK-GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
DV TYTTLI K + + + M+ KG P++AT+NV + R KL+
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLL 590
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M + P+ VTYN ++K +C ++ ++Y M + + PN Y +I C+
Sbjct: 591 EWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKA 650
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ A ++ ++K + + SAL+ L K
Sbjct: 651 RNMKEALYFHQEMIEKGLRLTASSYSALIRLLNK 684
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F +M G + A + L + +LK L E+ +K + D+ +
Sbjct: 371 GDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDK-GLDVDVVT 429
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ ++I +C+ G + +A+ V EM V P+V+TYT L K N L + M
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG N+ T+N I L QA ++M M+ G D TY +I C+SG D
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + ML + + P+ Y +++ C G + + ++KN P+V T ++L+
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609
Query: 369 E 369
+
Sbjct: 610 K 610
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
YG + +S NA L L L A E+P+K ++ S NI++KA G L
Sbjct: 222 YGLSPSPESCNAVLSRLP----LDEAIALFRELPDK-----NVCSHNILLKALLSAGRLK 272
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A EM PDV+TY T++ + E L + M KG N + I
Sbjct: 273 DACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI 329
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L NK + A +++ M G+ D V + VI GFC G L A++++ M R L
Sbjct: 330 ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+R + +I+ LC+ G+ A + ++ + K V T + L++G K +A +
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 384 M-ALVQRRV 391
+V RRV
Sbjct: 450 HNEMVGRRV 458
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ VI C G + A V+ +M GV D + +TT+IS F L+ M
Sbjct: 325 YTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ 384
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+G + T I L +A++++ M G++ D VTY ++I G+C+ G++
Sbjct: 385 KRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMV 444
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V++ M+GRR+ PN Y + LC++GD A + + K +V T ++L+
Sbjct: 445 EAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLI 504
Query: 369 EGLKK 373
GL K
Sbjct: 505 NGLCK 509
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 35/225 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP---------------------- 219
+ D F VI FC G L A + EMQK G+
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412
Query: 220 -------------DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
DV+TYT LI + K + N MV + PN+ T+ L
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ AN+L+ M G+E + TYN +I G C+ G+L+ A ++ + M +
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y T+I LC+ G+F+ A+ M ++ + K PS+ T + L+ G
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGF 577
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ AM +M G + V + + L +S + L E+ +K I+ I
Sbjct: 509 KFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK-GIKPSI 567
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N+++ FC G ++ ++ M + V+P+V+TY +L+ + D + ++
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKG 627
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M + PN T+N+ I+ R +A M G+ +Y+ +I+ +
Sbjct: 628 MHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKK 687
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
A+ + M L +Y + E + +C + ++ + V S
Sbjct: 688 FSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEASHVKS 741
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 7/283 (2%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR- 148
L A D +++ L+ + E ++ + + +AG A+ TFY GC+
Sbjct: 8 LPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 67
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
V+ N L L + A+ + + K + +++++N++I+A C+ +D A +
Sbjct: 68 GVRVYNHLLDALLRENMVGAVVP-VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ EM + G PD +++ T++S K R E G V P A++N + L
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCG 181
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ R W+ ++ M + G++P+ VTY ++ FC++ L MA + + M+ PN
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 241
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ ++ ++G + A M + + W PS + + L+ GL
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGL 284
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S+N V+ A C + + + V+ EM + G++P+V+TYTT++ AF K + + M
Sbjct: 171 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V GC PN+ TF ++ + A + M G P ++YN++I+G C G L
Sbjct: 231 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 290
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A +++M L+PN Y T++ GD + A ++ + P+V + +
Sbjct: 291 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNM 350
Query: 368 LEGLKK 373
++ L K
Sbjct: 351 IDVLCK 356
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ ++ M G + S N ++ L DLK F + ++ + + +
Sbjct: 253 GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM-KRNALLPNATT 311
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ ++ F G LD A L+ EM+ G KP+V+ YT +I K + L + M+
Sbjct: 312 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 371
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN TFN I L + R +A + M+R G P++ TYN ++ G R G+
Sbjct: 372 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 431
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + ML + Y T+I+ LCQ A ++ M + P T +A++
Sbjct: 432 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 491
Query: 369 EGLKKNNQ 376
K +
Sbjct: 492 HAYCKEGK 499
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 9/254 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE----SRDLKAIQAFLMEVPEKF 180
+ AG + AM + +M GCK V + VL + + I LM+
Sbjct: 319 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD----- 373
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ + +FN +I C+ G + +A V M++ G P+ TY L+ +++ +
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ M+ G +L T+N I L A L+G M GI+PD T+N +I
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C+ G + +A + M N Y +I LC +G + A + + + P+
Sbjct: 494 YCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPN 553
Query: 361 VDTISALLEGLKKN 374
T + L+ + N
Sbjct: 554 EATWNVLVRAIFTN 567
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
I AF G D+A LG + P V Y L+ A ++N +++ M G
Sbjct: 40 IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN+ T+N+ I+ L R A K++ M R G PDEV++ ++ G C+ G ++ A+
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ +P + Y ++H LC E + + + +++ P+V T + +++
Sbjct: 160 GFLA-----ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 214
Query: 372 KKNNQPCKANTIMA 385
K + A I+A
Sbjct: 215 CKARELRMACAILA 228
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ + N ++ C G + A VE Q+ G+K D +TYT LI+AF N E L+
Sbjct: 453 NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELF 512
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ GC P+ + I R A+ ++ +++ GI PD V YN +I GFCR+
Sbjct: 513 NEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ M L P+ Y T+I Y + GD A + + +K VP+V T
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATY 632
Query: 365 SALL 368
A++
Sbjct: 633 GAVI 636
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 10/263 (3%)
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
D F +M G + N+ L L + + LME + IQ ++ +F I+I
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNE-LMEKMVEMDIQPNVVTFGILINH 349
Query: 196 FCEMGILDKAYLVMVEMQ--------KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
C+ +D A V+ +M + V+PDV+ Y TLI K R + G GL M
Sbjct: 350 MCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERM 409
Query: 248 VC-KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
KGC P+ T+N I + +L M + G+ P+ VT N ++ G CR+G
Sbjct: 410 RSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGR 469
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + R + + Y +I+ C +F A + + +K P
Sbjct: 470 VSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYT 529
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
L+ G + + A+ ++A +++
Sbjct: 530 LISGFSQAGRMADASFVLAELKK 552
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 2/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G + A++ F + G K + A + + + E+ K D
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML-KSGCSPDA 524
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +I F + G + A V+ E++KLG++PD + Y TLI F + N+ +
Sbjct: 525 IVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKE 584
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P+ T+N I + A K+M M + G+ P TY VI +C +G+
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644
Query: 307 LDMAKKVYSAM-LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ A +++ M ++ PN IY +I+ LC+ A + +D P+ T +
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704
Query: 366 ALLEGLK 372
A+ +GL+
Sbjct: 705 AIFKGLR 711
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ-KLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ +N +I C++G + +M M+ + G PD ITY LI F K E G
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L++ M +G PN+ T N + + R A QR G++ D VTY +I
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC + + A ++++ ML P+ +Y T+I Q G A + + K P
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPD 558
Query: 361 VDTISALLEGLKKNNQ 376
+ L+ G + N+
Sbjct: 559 TVCYNTLIGGFCRTNK 574
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I FC+ G ++K + EM K GV P+V+T TL+ + R +
Sbjct: 418 DTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+G + T+ I N +A +L M + G PD + Y +I GF ++
Sbjct: 478 VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQA 537
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A V + + + P+ Y T+I C+ F+ + M K+ + P T
Sbjct: 538 GRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITY 597
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ L+ KN A +M
Sbjct: 598 NTLIAYASKNGDLKFAQKVM 617
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ AM+ F +M GC + +++ + A +F++ +K I+ D +N
Sbjct: 506 EKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRM-ADASFVLAELKKLGIRPDTVCYNT 564
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I FC + + ++ EM++ G+KPD ITY TLI+ K+ + + M+ G
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMA 310
P +AT+ I +A ++ M+ + P+ V YN++I C++ + A
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ M + PN Y + L E D
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDL 716
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I C ++ + + EM KLG + +L++ ++ N L MV
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335
Query: 252 CFPNLATFNVRIQHLVNKRRSWQA----NKLMGLMQRFGI----EPDEVTYNLVIKGFCR 303
PN+ TF + I H+ RR A K+ G + GI EPD V YN +I G C+
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395
Query: 304 SGHLDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
G + M ++ P+ Y +I C+ G+ + + K+ P+V
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455
Query: 363 TISALLEGLKKNNQPCKANTIMALVQRR 390
T++ L+ G+ + + A QRR
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRR 483
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M G K + N + +++ DLK Q + ++ K + + ++ VI A+C
Sbjct: 584 EMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI-KAGVVPTVATYGAVINAYCLN 642
Query: 200 GILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G ++A + +M+ V P+ + Y LI++ K+N+ + L M G PN T
Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 702
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
+N + L +++ + + M M PD +T ++ + G ++ KK
Sbjct: 703 YNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKK 756
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 114/215 (53%), Gaps = 7/215 (3%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
++++TE+ DL +ME+ EK + + +FN +I A+ G L+K + V+ +MQ G
Sbjct: 418 MEMITEAEDL------VMEM-EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKG 470
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+K +VI++ +++ AF K+ + + + M+ K PN +N I + + QA
Sbjct: 471 IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L+ M+ G+ TYNL++KG C++ +D A+++ + + L P+ Y T+I
Sbjct: 531 LLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISAC 590
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
C +GD + A + ++ K + P++ T LL L
Sbjct: 591 CNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--GVKPDVITYTTLISAFYKDNRPEIGNG 242
D F++N ++A G LD+A ++ M + PD +Y +I+ ++ +
Sbjct: 157 DTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALK 216
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+++ MV +G PN T+N I V +L M + G +P+ VTYN+++ G C
Sbjct: 217 VFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R+G +D + + M ++P+ Y + L + GD + +S+KK +
Sbjct: 277 RAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAY 336
Query: 363 TISALLEGLKKNNQPCKANTIMALV 387
T S LL GL K+ + KA ++ ++
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEML 361
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 35/224 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D FS+N+VI G A V EM GV P+ ITY T+I K E G L
Sbjct: 194 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLR 253
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY---------- 294
+ M+ G PN+ T+NV + L R + LM M + + PD TY
Sbjct: 254 DQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRT 313
Query: 295 -------------------------NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
++++ G C+ G + A++V ++ L+P IY
Sbjct: 314 GDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIY 373
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
T+I+ CQ D A+ + + ++ P T +AL+ GL K
Sbjct: 374 NTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 97/196 (49%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I +C++ L A+ + +M+ ++PD ITY LI+ K L M
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ TFN I + + ++ MQ GI+ + +++ V+K FC++G +
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + M+ + ++PN ++Y ++I + G A+++ + S+ T + LL
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 369 EGLKKNNQPCKANTIM 384
+GL KN+Q +A ++
Sbjct: 553 KGLCKNSQIDEAEELI 568
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K MI A D +M G +V++ N + + L+ L ++ +K I+ ++
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK-GIKSNV 475
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
SF V+KAFC+ G + +A ++ +M V P+ Y ++I A+ + E L
Sbjct: 476 ISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G ++ T+N+ ++ L + +A +L+ + G+ PD V+YN +I C G
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
D A ++ M + P + Y ++ L G + + + + KN PS
Sbjct: 596 TDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPS 649
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N+++ C G +D+ +M EM + PD TY+ L + L+
Sbjct: 264 NVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLF 323
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG T ++ + L + +A +++ ++ G+ P YN +I G+C+
Sbjct: 324 GESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQV 383
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A ++ M R + P+ Y +I+ LC+ A + + K PSV+T
Sbjct: 384 RDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETF 443
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+ L++ + Q K T+++ +Q + SN +S F S++
Sbjct: 444 NTLIDAYGRAGQLEKCFTVLSDMQDK--GIKSNVIS-FGSVV 482
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG+AG ++ DM G K V S + +K ++ + A L ++ K +
Sbjct: 450 YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK-DVVP 508
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +N +I A+ E G ++A+L++ +M+ GV + TY L+ K+++ + L
Sbjct: 509 NAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI 568
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G P++ ++N I NK + +A +L+ M ++ I P TY+ ++ +
Sbjct: 569 YNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSA 628
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQT 331
G + + +Y M+ + + P+ IY T
Sbjct: 629 GRVHDMECLYQHMVHKNVEPSSSIYGT 655
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-----PDEVTYNLVI 298
+ L+V G P+ +N +Q V + ++ + +++R G PD +YN+VI
Sbjct: 146 FGLLVAAGARPDTFAWNKAVQACV---AAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVI 202
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G RSG A KV+ M+ R + PN+ Y TMI + GD + + ++
Sbjct: 203 AGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRK 262
Query: 359 PSVDTISALLEGL 371
P+V T + LL GL
Sbjct: 263 PNVVTYNVLLSGL 275
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 1/240 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
G K V + N L L + + +A LM+ + + D F+++I+ G
Sbjct: 260 GRKPNVVTYNVLLSGLCRAGRMDETRA-LMDEMTSYSMLPDGFTYSILFDGLTRTGDSRT 318
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
+ E K GV T + L++ KD + + ++V G P A +N I
Sbjct: 319 MLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLIN 378
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
R A + M+ I PD +TYN +I G C+ + A+ + M + P
Sbjct: 379 GYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDP 438
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
+ + + T+I + G + + D K +V + ++++ KN + +A I+
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAIL 498
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ Y ++G + A M G ++ + N LK L ++ + + + + +
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQ- 574
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ S+N +I A C G D+A ++ EM K ++P + TY L+SA R
Sbjct: 575 GLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDM 634
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQH 265
L+ MV K P+ + + R ++
Sbjct: 635 ECLYQHMVHKNVEPSSSIYGTRCEN 659
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 9/254 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ + C V + L L R + I+ F + DI
Sbjct: 229 KTGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMA--RTGPSPDI 286
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI+ + G+ AY ++ M + GV PD +T+ +LI+ +DNR L
Sbjct: 287 YTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQE 346
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCR 303
MV +GC PN T+ + ++ L R+ +A++ + L QR + P+ TYN V+ C+
Sbjct: 347 MVSRGCDPNAITYTILLKWLA---RNARADECVELFQRLLDRKLAPNVYTYNTVMSALCK 403
Query: 304 SGHLDMAKKVYSAMLGRRLM-PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+G LD A +++ ML PN Y+ +IH LC + + A ++ K++ P V
Sbjct: 404 AGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVA 463
Query: 363 TISALLEGLKKNNQ 376
++ K +
Sbjct: 464 CYGTIVAAFCKQGR 477
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 134/313 (42%), Gaps = 37/313 (11%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G ++ ++ DM G +++ LN L+ L ++ ++ F E F ++ + +
Sbjct: 90 GNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVST 149
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++I++ A + Y ++ EM+ +G++ D TY+ +I + K + L M+
Sbjct: 150 YSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMI 209
Query: 249 CKGCFPN----------------------------------LATFNVRIQHLVNKRRSWQ 274
+ C P+ + T+N + + RR +
Sbjct: 210 SRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKR 269
Query: 275 ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
K+ M R G PD TYN++ +G R G A K+ M ++P+ + ++I+
Sbjct: 270 GIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLIN 329
Query: 335 YLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHF 394
L ++ ++ A + ++ + + P+ T + LL+ L +N +A+ + L QR +
Sbjct: 330 GLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARN---ARADECVELFQRLLDRK 386
Query: 395 SSNQLSAFKSILS 407
+ + + +++S
Sbjct: 387 LAPNVYTYNTVMS 399
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 127 KAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAG + A++ F + + + + +V + + + LT ++ + L E+ E ++ D
Sbjct: 123 KAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREM-ESVGLEAD 181
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPD------------------------- 220
+++++I + C+ G++DKA +++ M PD
Sbjct: 182 KDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAK 241
Query: 221 ---------VITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
V+TY +L+ F K R + G ++ M G P++ T+N+ + L ++
Sbjct: 242 EADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGL-SRHG 300
Query: 272 SWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
W+ A KL+ M + G+ PD VT+N +I G A + M+ R PN Y
Sbjct: 301 LWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYT 360
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ +L + + + + + + P+V T + ++ L K
Sbjct: 361 ILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCK 403
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I++K D+ + + + P+V TY T++SA K R + + L+ +
Sbjct: 357 ITYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGV 416
Query: 247 MVCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ C P N T+ I L K +A L+ M + PD Y ++ FC+ G
Sbjct: 417 MLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQG 476
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+D A ++ M ++ +++T++ LC+
Sbjct: 477 RIDEAFELLERM---PFAGDKVMFRTLVRALCK 506
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 92/230 (40%), Gaps = 38/230 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+++++N V+ A C+ G LD+A+ L V + P+ ITY LI E L
Sbjct: 3 NVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVLL 62
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ + K + AT+ + ++R + +A +L+ M G N ++G C
Sbjct: 63 LDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGLC 122
Query: 303 RSGHLDMAKK----------------VYSAMLGR--------------------RLMPNR 326
++G++D A + YS ++ L ++
Sbjct: 123 KAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADK 182
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y +IH LC+ G + A ++ + + +N VP ++E L K +
Sbjct: 183 DTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGR 232
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM-PNRKIYQTMIHYLCQEGDFNLAYI 347
P+ TYN V+ C++G LD A +++ ML PN Y+ +IH LC + + A +
Sbjct: 2 PNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVL 61
Query: 348 M 348
+
Sbjct: 62 L 62
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLM-QRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN+ T+N + L R QA++L G+M P+ +TY +I G C L+ A
Sbjct: 2 PNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVL 61
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQE-GDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A+ + Y + C E G+ + KD + S+ ++ L GL
Sbjct: 62 LLDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGL 121
Query: 372 KKNNQPCKANTI 383
CKA +
Sbjct: 122 ------CKAGNV 127
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++ +I A C++G +D A L +M G+ PD+ +++L+ ++ E L+
Sbjct: 376 NIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELF 435
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ +G + FN + +L + R +A +L+ LM R G+ PD ++YN ++ G C +
Sbjct: 436 FEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLT 495
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A K+ ++ L P++ Y T++H C+ + AY + ++ + K P V T
Sbjct: 496 GRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTY 555
Query: 365 SALLEGLKKNNQPCKANTI-MALVQRRV 391
+ +L GL + + +A + ++++ R
Sbjct: 556 NTILHGLFQTGRFSEAKELYLSMINSRT 583
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQ 183
Y K MI AM F M + + A + L + R A+ F + E +
Sbjct: 352 YAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG--MT 409
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DIF F+ ++ C + +KA + E+ G++ D + + TL+ ++ R L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+LM+ G P++ ++N + R +A KL+ ++ G++PD+VTYN ++ G+C+
Sbjct: 470 IDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCK 529
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ +D A ++ ML + L P+ Y T++H L Q G F+ A + + ++ T
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 589
Query: 364 ISALLEGLKKNN 375
+ ++ GL KNN
Sbjct: 590 YNIIINGLCKNN 601
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D FN ++ C G + +A ++ M ++GV+PDVI+Y TL+ R +
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L +++V G P+ T+N + RR A L M G+ PD VTYN ++ G
Sbjct: 503 KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 562
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ----EGDFNLAYIMCKDSMKKNW 357
++G AK++Y +M+ R N Y +I+ LC+ + F + + +C ++ +
Sbjct: 563 FQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDI 622
Query: 358 VPSVDTISALLEGLKKNN 375
+ I ALL+G +K +
Sbjct: 623 FTANIMIGALLKGGRKED 640
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP-DVITYTTLISAFYKDNR-PEIGNGLW 244
F++ I+I FC MG L + + K G + D + ++ L+ R E + L
Sbjct: 93 FTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILL 152
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI---EPDEVTYNLVIKGF 301
M GC P++ ++++ ++ N++R+ +A +L+ +M G P+ VTY VI G
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGL 212
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ +D AK V+ M+ + + PN Y +IH G + M ++ P
Sbjct: 213 CKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDC 272
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
+ LL+ L KN + +A I V R+
Sbjct: 273 YIYAVLLDYLCKNGRCTEARNIFDSVIRK 301
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+++ + ++ D+ S+N ++ C G +D+A ++ + +G+KPD +TY TL+ +
Sbjct: 469 LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC 528
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K R + L+ M+ KG P++ T+N + L R +A +L M + +
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN++I G C++ +D A K++ ++ + L + MI L + G A +
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI 648
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
VP V+T + E L K
Sbjct: 649 SAYGLVPDVETYCLIAENLIKEGS 672
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 157 LKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
LK L +++ + +A L +PE F D+FS++I++K FC ++A ++ M
Sbjct: 135 LKGLCDAKRVDEATDILLRRMPE-FGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADD 193
Query: 216 GV---KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
G P+V+TYTT+I K + G++ M+ KG PN T+ I ++ +
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKW 253
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ +++ M G++PD Y +++ C++G A+ ++ +++ + + PN IY +
Sbjct: 254 KEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGIL 313
Query: 333 IHYLCQEGDFN 343
+H EG +
Sbjct: 314 LHGYATEGSLS 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A L++V ++ D ++N ++ +C+ +D AY + EM G+ PDV+TY T++
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561
Query: 231 FYK---------------DNRPEIGNGLWNLMV---CKGCFPNLA--------------- 257
++ ++R ++ +N+++ CK F + A
Sbjct: 562 LFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLD 621
Query: 258 --TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
T N+ I L+ R A L + +G+ PD TY L+ + + G L+ +++S
Sbjct: 622 IFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFS 681
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
AM PN ++ ++ +L GD N A +KN+ T S L+
Sbjct: 682 AMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 83/184 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I + +G + ++ EM G++PD Y L+ K+ R +++ +
Sbjct: 239 TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSV 298
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ KG PN+ + + + + + + + LM G+ PD +N++ + + +
Sbjct: 299 IRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMI 358
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A ++ M +RL PN Y +I LC+ G + A + + + P + S+L
Sbjct: 359 DEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSL 418
Query: 368 LEGL 371
+ GL
Sbjct: 419 VYGL 422
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVE-MQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D F+ ++K C+ +D+A +++ M + G PDV +Y+ L+ F + R E L
Sbjct: 127 DTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALEL 186
Query: 244 WNLMVCKG---CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++M G PN+ T+ I L + +A + M G+ P+ TY +I G
Sbjct: 187 LSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHG 246
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ G ++ M L P+ IY ++ YLC+ G A + ++K P+
Sbjct: 247 YLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN 306
Query: 361 VDTISALLEGLKKNNQPCKANTIMALV 387
V LL G + ++ + L+
Sbjct: 307 VTIYGILLHGYATEGSLSEMHSFLDLM 333
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 74/156 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D + + +++ C+ G +A + + + G+KP+V Y L+ + + +
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+LMV G P+ FN+ K +A + M++ + P+ VTY +I
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
C+ G +D A ++ M+ + P+ ++ ++++ LC
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLC 423
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 172 FLMEVPEKFH------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
F+ E + FH +Q DIF+ NI+I A + G + A + + G+ PDV TY
Sbjct: 602 FVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYC 661
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+ K+ E + L++ M G PN N ++ L+++ +A + +
Sbjct: 662 LIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEK 721
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
+ T +++I + R + +AK +
Sbjct: 722 NFSLEASTTSMLISIYSRGEYQQLAKSL 749
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 10/292 (3%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
+++ V L ++FD + L+ + + ++M A A+D F+ M
Sbjct: 199 SYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKM 258
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLK----AIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
+G + K++N L L + R +K A QA +P D SFN ++ +C
Sbjct: 259 DRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPP------DESSFNTLVHGWC 312
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ +L +A M EM++ G P V TYT LI A+ + + +G+ + M KGC PN+
Sbjct: 313 KARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNII 372
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+ + + L R+ +A +++ G D YN +I CR+G L A V M
Sbjct: 373 TYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEM 432
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ PN + T+I C A + +++ P + T + LL+
Sbjct: 433 HRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLK 484
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 7/200 (3%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
+MH GC + + + L ++ R +A+ F + ++ D +N +I C
Sbjct: 361 EMHTKGCTPNIITYTIVMHALGKAGRTQEALDTF--DKVKQDGCALDASFYNCLIYILCR 418
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
G L A V+ EM + G+ P++ T+ TLISA + E L M + C P++ T
Sbjct: 419 AGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKT 478
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRF--GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+ ++ RR W L + F I PD TY L++ CR+G L +
Sbjct: 479 YTPLLKLCC--RRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEE 536
Query: 317 MLGRRLMPNRKIYQTMIHYL 336
M+ + P + + ++ L
Sbjct: 537 MVLKGFTPQQATFDLVLEKL 556
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 2/217 (0%)
Query: 158 KVLTE-SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
KVL+ S D A F M + S+++++ + D ++ +M ++G
Sbjct: 168 KVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIG 227
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
+ T T ++ NR ++ M G + NV + L +R +A
Sbjct: 228 GLVSLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRAR 287
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ + I PDE ++N ++ G+C++ L A++ M P+ Y +I
Sbjct: 288 GAFQAL-KGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAY 346
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
C E DF + + K P++ T + ++ L K
Sbjct: 347 CMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGK 383
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + + F M G ++ NA + L +S + L E+ K H+ +
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK-HVHPTV 630
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ ++ LD+AY++ E + G++ +VI Y++LI F K R + +
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KG PN+ T+N + LV +A M+ P+ TY+++I G CR
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A + M + L+PN Y TMI L + G+ AY + + +P + +A
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810
Query: 367 LLEGLKKNNQPCKA 380
L+EG+ N+P +A
Sbjct: 811 LIEGMSNANRPMEA 824
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 2/289 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++M YG A A + GC +V S N+ L L + R K +A + K
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR--KVDEALTLFDVMKK 379
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ +I ++NI+I C G +++AY + EM+ G+ P++++ ++ K N+ E
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA 439
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ ++ +GC PN T+ I L K + A +L M G + + + Y +I+
Sbjct: 440 HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRN 499
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F G + K+Y M+ R P+ + T + + + G+ + +D ++P
Sbjct: 500 FFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPD 559
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
V + S L+ GL K Q + + I + ++ + +A L KS
Sbjct: 560 VRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKS 608
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G + A + +M + TV + + + L + L E K I+ ++
Sbjct: 607 KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK-GIELNV 665
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I F ++G +D+AYL++ EM K G+ P+V T+ +L+ A K + +
Sbjct: 666 ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQS 725
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C PN T+++ I L ++ +A MQ+ G+ P+ VTY +I G + G+
Sbjct: 726 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGN 785
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A ++ +P+ + +I + AY + +++ + +V T +
Sbjct: 786 ITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCIS 845
Query: 367 LLEGLKKN 374
LL+ L K
Sbjct: 846 LLDALNKT 853
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A++ M G + +V ++ L ++ A + EV + ++ DI +N+
Sbjct: 193 ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV-KGSCLEPDIVLYNV 251
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL-------- 243
I F + G +D A+ E++ G++PD ++YT+++ K R L
Sbjct: 252 CIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAER 311
Query: 244 -------WNLMVC--------------------KGCFPNLATFNVRIQHLVNKRRSWQAN 276
+N M+ +GC P++ +FN + L KR+ +A
Sbjct: 312 DVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 371
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L +M++ +P+ TYN++I C +G ++ A K+ M L PN M+ L
Sbjct: 372 TLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
C+ A+ + + + ++ P+ T +L++GL K +
Sbjct: 431 CKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGK 470
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 87/185 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I+ F G + + + EM + G +PD+ T + +K E G ++ M
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P++ ++++ I L ++ + + + M + G D YN V+ G C+SG +D
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V M + + P Y +++ L + + AY++ +++ K +V S+L+
Sbjct: 613 KAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLI 672
Query: 369 EGLKK 373
+G K
Sbjct: 673 DGFGK 677
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ F DM +G V+S + + LT++ + + ++ D
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ-GFALDA 595
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N V+ C+ G +DKAY V+ EM+
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMK--------------------------------- 622
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
K P +AT+ + L R +A L + GIE + + Y+ +I GF + G
Sbjct: 623 --VKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGR 680
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTIS 365
+D A + M+ + L PN + +++ L + + + A I C SMK+ P+ T S
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALI-CFQSMKEMKCSPNTYTYS 739
Query: 366 ALLEGL 371
L+ GL
Sbjct: 740 ILINGL 745
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 7/189 (3%)
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF--SFNIVIKAFCEMGILDKAYLVMVE 211
NA L L S DL A++ L E+ H+ + + + ++ L+ A+ V+
Sbjct: 112 NAVLPFL--SHDLAALEKVLEEMS---HLGYGLPNPACAALVATLVRSRRLEDAFRVIGA 166
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M+ L +P YT LI A + +PE L M G ++ F ++ L + +
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQ 226
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A L+ ++ +EPD V YN+ I F ++G +DMA K + + L P+ Y +
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTS 286
Query: 332 MIHYLCQEG 340
M+ LC+ G
Sbjct: 287 MVWVLCKAG 295
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 137/312 (43%), Gaps = 29/312 (9%)
Query: 104 EHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+ Q LP+ + F + ML G AG + A M G R V+S N L L
Sbjct: 271 DWQHGLPRPDQVTFDV---MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
+ + Q L E+ + IQ + +++NI++ C+ G A V ++ + PDV
Sbjct: 328 RNGRVGEAQELLREMAHE-GIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDV 386
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TYT+L+ A+ N + + M KGC PN T+NV +Q L R+ +A +L+
Sbjct: 387 VTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLER 446
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM-------LGR-------------- 320
M G D N++I G CR+ LD+A + M LGR
Sbjct: 447 MNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSI 506
Query: 321 --RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
R +P++ Y +I LC+EG F+ A + + K+ P + G K+ +
Sbjct: 507 SQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTS 566
Query: 379 KANTIMALVQRR 390
A ++ ++++
Sbjct: 567 LAIKVLRDMEKK 578
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +++I+I A C+ G D+A ++EM + PD + Y T I + K + + +
Sbjct: 513 DQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL 572
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC P+ T+N+ I+ K +S + KLM M+ GI P+ +TYN +IK FC+
Sbjct: 573 RDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQ 632
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
G ++ A + ML L+PN + +I C+ DF A ++
Sbjct: 633 GMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMV 676
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQ---KLGV-KPDVITYTTLISAFYKDNRPEIG 240
++ +FN I A C+ G + AY + +MQ + G+ +PD +T+ ++S F +
Sbjct: 241 NVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEA 300
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L ++M C G + ++N + LV R +A +L+ M GI+P+ TYN+++ G
Sbjct: 301 RVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSG 360
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G A++V + + + P+ Y +++H C +G+ A + + +K P+
Sbjct: 361 LCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPN 420
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
T + LL+ L + + +A ++
Sbjct: 421 SFTYNVLLQSLWRAGRTTEAERLL 444
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 119/256 (46%), Gaps = 5/256 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQ 183
+ K G+++ A M + G V + NA + L ++ R L A + F ++ E +
Sbjct: 217 FCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIF-QDMQEDWQHG 275
Query: 184 F---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D +F++++ FC+ G +D+A +++ M+ G V +Y +S ++ R
Sbjct: 276 LPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEA 335
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L M +G PN T+N+ + L + +++ A ++ ++ + PD VTY ++
Sbjct: 336 QELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHA 395
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+C G++ A ++ M + PN Y ++ L + G A + + +K +
Sbjct: 396 YCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLD 455
Query: 361 VDTISALLEGLKKNNQ 376
+ +++GL +N++
Sbjct: 456 TAGCNIIIDGLCRNSR 471
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 24/276 (8%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y G I A +M GC + N L+ L + + L + EK
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451
Query: 181 HIQFDIFSFNIVIKAFCE---------------------MGILDKAYLVMVEMQKLGVK- 218
+ D NI+I C +G L ++L +V + +
Sbjct: 452 Y-SLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRC 510
Query: 219 -PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD ITY+ LISA K+ R + M+ K P+ ++ I ++ A K
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
++ M++ G P TYNL+I+GF + K+ S M + + PN Y ++I C
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFC 630
Query: 338 QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Q+G N A + + ++ VP++ + L++ K
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 21/261 (8%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
+ D+ L G + V + N L+ L ++ ++ Q +P + + FSF I+ + +C
Sbjct: 133 YKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPAR-----NEFSFGILARGYC 187
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
G A V+ M + +++ T+++ F K+ E L M +G PN+
Sbjct: 188 RAGRSIDALKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVV 243
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQ---RFGI-EPDEVTYNLVIKGFCRSGHLDMAKKV 313
TFN RI L R A ++ MQ + G+ PD+VT+++++ GFC +G +D A+ +
Sbjct: 244 TFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVL 303
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M + + Y + L + G A + ++ + P+ T + ++ GL K
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCK 363
Query: 374 NNQPCKANTIMALVQRRVPHF 394
+ A RRV +F
Sbjct: 364 EGK--------AFDARRVENF 376
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I D ++ I +C+ G A V+ +M+K G P TY LI F + ++ E
Sbjct: 545 ISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIM 604
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + M KG PN+ T+N I+ + +A L+ M + + P+ +++L+IK +
Sbjct: 605 KLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAY 664
Query: 302 CRSGHLDMAKKVYSAML 318
C+ A+ V+ A L
Sbjct: 665 CKITDFPSAQMVFDAAL 681
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + I AF + L A P Y LI A +++R ++ L+
Sbjct: 85 DVLPLRLAIPAFRSLRALTSA-----------PPPTTPVYNRLILAALRESRLDLVEALY 133
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR-FGIEP--DEVTYNLVIKGF 301
++ G P++ T N+ +Q L + R M L QR F P +E ++ ++ +G+
Sbjct: 134 KDLLLSGAQPDVFTRNLLLQALCDAGR-------MELAQRVFDAMPARNEFSFGILARGY 186
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR+G A KV M L+ + T++ C+EG A + + + P+V
Sbjct: 187 CRAGRSIDALKVLDGMPSMNLV----VCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNV 242
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
T +A + L K + A I +Q H
Sbjct: 243 VTFNARISALCKAGRVLDAYRIFQDMQEDWQH 274
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 42/356 (11%)
Query: 90 LAGARRFDYIEHLLEH-QKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR 148
L+ R+F + L+E +K+ P+ + +M + A M+K A++ +M YG +
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
L L ++ +K ++ EKF F+ ++ +C G L +A V
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTS--LLYGWCREGKLMEAKEV 258
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV- 267
+V+M++ G++PD++ +T L+S + + L N M +G PN+ + V IQ L
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++R +A ++ M+R+G E D VTY +I GFC+ G +D V M + +MP++
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 328 -----------------------------------IYQTMIHYLCQEGDFNLAYIMCKDS 352
IY +I C+ G+ A + +
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMALVQRRVPHFSSNQLSAFKSILS 407
P VDT ++ G +A N +V R + FS+ Q KS+L+
Sbjct: 439 EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI--FSAPQYGTLKSLLN 492
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 53/349 (15%)
Query: 102 LLEHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
L+E ++ L Q + G I++ Y AG + A D DM G + V
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 156 ALKVL--TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
++ L TE R +A++ F+ E++ + DI ++ +I FC+ G++DK Y V+ +M+
Sbjct: 312 LIQALCRTEKRMDEAMRVFVE--MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
K GV P +TY ++ A K + E L M +GC P+L +NV I+
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG---------------------------- 305
+A +L M+ G+ P T+ ++I GF G
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 306 ---------HLDMAKKVYSAMLGR--RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
L+MAK V+S + + N + IH L +G A C D M+
Sbjct: 490 LLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMME 549
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFK 403
+ +P +T + L++GL K TI A + +V +S + +FK
Sbjct: 550 MDLMPQPNTYAKLMKGLNK----LYNRTIAAEITEKVVKMASEREMSFK 594
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 22/235 (9%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKR-----TVKSLNAALKVLTESRDLKA 168
R G I+R++ G AG + Y L+ K+ + + + + +L++ R A
Sbjct: 96 RPGLIIRVLSRCGDAGNLG------YRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGA 149
Query: 169 IQAFLMEV----PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
+ + E+ PE + F ++++ F ++ KA V+ EM K G++PD +
Sbjct: 150 VWGLIEEMRKTNPELIEPEL----FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
L+ A K+ + + ++ M K FP NL F + + + +A +++ M+
Sbjct: 206 GCLLDALCKNGSVKEASKVFEDMREK--FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G+EPD V + ++ G+ +G + A + + M R PN Y +I LC+
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 107/191 (56%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+I+ D+++FNI++ FC+ G L KA V+ M +KP+V T+ TL+ F KD + + G
Sbjct: 273 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEG 332
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ +M+ +G PN+ T+ + ++ +A K+ M + G+ + +YN++I G
Sbjct: 333 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMING 392
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC+ +D A K++ M + ++P+ Y ++I LC+ G + A+ + + + P+
Sbjct: 393 FCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPN 452
Query: 361 VDTISALLEGL 371
+ T +++L L
Sbjct: 453 IITYNSILNAL 463
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 102/192 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I+ F +G L A + +M +KPDV T+ L+ F K+ R + +
Sbjct: 242 DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++M+ + PN++TFN + R+ + + +M + GI+P+ VTY ++ G+C
Sbjct: 302 DMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 361
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ AKK+++ M R + N Y MI+ C+ + A + + K+ +P V T
Sbjct: 362 KQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTY 421
Query: 365 SALLEGLKKNNQ 376
++L++GL K+ +
Sbjct: 422 NSLIDGLCKSGK 433
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQFD 185
G +K A+D F M L K V + N + + LK + L M + + I+ +
Sbjct: 256 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD---IKPN 312
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +FN ++ FC+ + + V M K G+KP+V+TY +L+ + + ++N
Sbjct: 313 VSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFN 372
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G N+ ++N+ I ++ +A KL M I PD VTYN +I G C+SG
Sbjct: 373 TMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSG 432
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ A ++ + M R PN Y ++++ L
Sbjct: 433 KISYAFQLVNEMHDRGQPPNIITYNSILNAL 463
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+NI+I FC++ +DKA + +EM + PDV+TY +LI K + L
Sbjct: 382 NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLV 441
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G PN+ T+N + L+ K + GI+P+ T ++IKG C+S
Sbjct: 442 NEMHDRGQPPNIITYNSILNALLTKLKDQ------------GIQPNMHTDTILIKGLCQS 489
Query: 305 GHLDMAKKVYSAML 318
G L+ A+KV+ +L
Sbjct: 490 GKLEAARKVFEDLL 503
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF-----------YKDNR 236
+FNI+I FC++G++ A+ V+ ++ K+G +PD+IT T I F + D
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164
Query: 237 PEIG------------NGLWNLMVCKGCFP------------NLATFNVRIQHLVNKRRS 272
+G NGL + + N +N I + +
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
A L M I PD VTY+ +I+GF G L A +++ M+ + P+ + +
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ C+EG A + M ++ P+V T + L++G K+ + + T+ A++ ++
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQ 342
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
FH+ D S+ +I C++G A ++ + V+ + + Y T+I KD
Sbjct: 169 FHL--DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L++ MV K P++ T++ I+ + A L M I+PD T+N+++
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
GFC+ G L AK V M+ + + PN + T++ C++ + MK+ P
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+V T +L++G Q KA I + +R
Sbjct: 347 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQR 377
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 217 VKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQAN 276
++ + I Y+++ + F+ N + L+N ++ + FN + LV +
Sbjct: 30 LQKNFIPYSSISTTFH-SNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88
Query: 277 KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L M+ GI P+ VT+N++I FC+ G + A V + +L P+ T I
Sbjct: 89 SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148
Query: 337 CQEGDFNLA 345
C +G + A
Sbjct: 149 CLKGQIHQA 157
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ PN TF I R A ++ M + PD +TYN +I
Sbjct: 224 DANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM + P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + P+L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A K M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 99/185 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K ++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M + P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L P+ Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G +K A F +M + A + + ++ ++A + L+E+ K + ++
Sbjct: 334 RLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSK-GVDLNL 392
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
FN + +C G +D+A + M+K G+ DV TY L + K +R + + N
Sbjct: 393 VIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNS 452
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KG PN+ TF + I+ + +A +L M++ G P+ +TYN +I +C+
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEK 512
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A K+ S M+ + L+P+ Y ++IH C G + A + + K +V T ++
Sbjct: 513 VKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTS 572
Query: 367 LLEGLKKNNQPCKA 380
++ GL K + +A
Sbjct: 573 MISGLSKEGRADEA 586
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L + EK I D+F++NI+ C++ D+A ++ M + GVKP+V+T+T I +
Sbjct: 414 LQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYC 473
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ L+ M KG PN+ T+N I K + QA+K+ M G+ PD
Sbjct: 474 KEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLY 533
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+ +I G C G +D A K+++ M + + N Y +MI L +EG + A+ + +
Sbjct: 534 TYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM 593
Query: 353 MKKNWVPSVDTISALLEGLKK 373
MK +P ++L+ K
Sbjct: 594 MKIGLIPDDRVFTSLVGSFHK 614
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
+V + + ++ + S D++ + E+ EK +I+ D++ ++ +I +G + +A+ +
Sbjct: 286 SVATYSILIQWYSSSGDIEEAEKIFEEMREK-NIEMDVYVYSSMISWSRRLGNMKRAFAL 344
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM + + P+ TY LI K + E L M KG NL FN +
Sbjct: 345 FDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCR 404
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + +A +L +M++ GI D TYN++ G C+ D AK + ++M+ + + PN
Sbjct: 405 RGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVT 464
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ I C+EG+ A + +D KK VP++ T + L++ K + +A+ I
Sbjct: 465 FTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI 519
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG-VKPDVITYTTLISAFYKDNRP 237
KF I+ + S +VI C G ++KA +M EM G VKP+V TY TL++A+
Sbjct: 211 KFEIR--VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDR 268
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ + + LM + ++AT+++ IQ + +A K+ M+ IE D Y+ +
Sbjct: 269 KGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSM 328
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I R G++ A ++ M R ++PN Y +I +C+ G A I+ + K
Sbjct: 329 ISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV 388
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
++ + ++G + + +A + A+++++
Sbjct: 389 DLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKK 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF-PNLATFNVRIQHLV 267
MVE K ++ V + T +I + E L + MV KG PN+ T+N + V
Sbjct: 206 MVESNKFEIR--VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV 263
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++ ++++ LM++ + TY+++I+ + SG ++ A+K++ M + + +
Sbjct: 264 GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVY 323
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+Y +MI + + G+ A+ + + +++ VP+ T AL+ G+ K Q A ++ +
Sbjct: 324 VYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEM 383
Query: 388 QRR 390
Q +
Sbjct: 384 QSK 386
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N++I C+ G L A + ++M G++PD ITYT LI A + L
Sbjct: 523 DTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLL 582
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G P++ T+ + I + + A M GIEP+E+TYN++I CR+
Sbjct: 583 NGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRT 642
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +A + ML R L PN+ Y +I C+EG++ A + + + P T
Sbjct: 643 GRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 702
Query: 365 SALLEGLKKNN 375
+AL +G K +
Sbjct: 703 NALFKGFDKGH 713
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 36/264 (13%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M G T+ + NA + L +S ++A Q E+ + D+ ++N ++ +C+
Sbjct: 339 EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM-RAMGLLPDLITYNSMLNGYCKA 397
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L +A ++ ++++ G+ P V+TY TLI + + E L MV +GCFP++ T+
Sbjct: 398 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTY 457
Query: 260 NV------RIQHLVNKRR-----------------------------SWQANKLMGLMQR 284
+ ++++L R + +A +L +M
Sbjct: 458 TILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMML 517
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
GI PD VTYN++I G C++G+L AK + M+ L P+ Y +IH C+ G +
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577
Query: 345 AYIMCKDSMKKNWVPSVDTISALL 368
A + + PSV T + L+
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILI 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G ++ A +M GC V + + + R+L + F E+ K +Q
Sbjct: 429 YCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSK-GLQP 487
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F++N I A +G KA+ + M G+ PD +TY +I K + L
Sbjct: 488 DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLK 547
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P+ T+ I + +A KL+ M G++P VTY ++I CR
Sbjct: 548 MKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRR 607
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G+L A + ML + PN Y +IH LC+ G LAY + +++ P+ T
Sbjct: 608 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTY 667
Query: 365 SALLEG 370
+ L++G
Sbjct: 668 TLLIDG 673
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F++N +I A E G + K + +EM+ G+ P ++TY +I K + E +
Sbjct: 315 FTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAE 374
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P+L T+N + +A L+G ++R G+ P +TYN +I G+CR G
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434
Query: 307 LD-----------------------------------MAKKVYSAMLGRRLMPNRKIYQT 331
L+ MA++ + ML + L P+ Y T
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494
Query: 332 MIHYLCQE---GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
I C E GD + A+ + + M K P T + +++GL K
Sbjct: 495 RI---CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 144 YGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
+G V+ N L+VL ++ ++A E+ + I+ I ++N ++ +F + G D
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQ-LEIEPTIVTYNTLLDSFLKEGRKD 260
Query: 204 KAYLVMVEMQ------------------------------------KLGVKPDVITYTTL 227
+A +++ EM+ +L K TY L
Sbjct: 261 EASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPL 320
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I+A + + L M +G P L T+N I L+ + A M+ G+
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
PD +TYN ++ G+C++G+L A + + L P Y T+I C+ G A
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++ +++ P V T + L+ G K
Sbjct: 441 LKEEMVEQGCFPDVCTYTILMNGSHK 466
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ ++ C G P++ N ++ L + R + M + IEP VTYN ++ F +
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255
Query: 304 SGHLDMAKKVYSAM--LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G D A + M G + N Y +I +L +EG A + DSM+ + S
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLV-DSMRLSKKASS 314
Query: 362 DT----ISALLE 369
T I+ALLE
Sbjct: 315 FTYNPLITALLE 326
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 132/264 (50%), Gaps = 12/264 (4%)
Query: 90 LAG-ARRFDYIEHLLEHQKS----LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLY 144
LAG R+FD L++ K+ +P E F + ++ Y KAG+ A+ F M Y
Sbjct: 1187 LAGKVRQFDLAWQLIDLMKTRNVEIPV---ETFTI-LVRRYVKAGLAAEAVHAFNRMEDY 1242
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GCK + + + L++ R Q+F + ++F + D+ + ++ +C G + +
Sbjct: 1243 GCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF--EPDVVVYTSLVHGWCRAGNISE 1300
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A V EM+ G+ P+V TY+ +I A + + + +++ M+ GC PN TFN ++
Sbjct: 1301 AERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 1360
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V R+ + ++ M+R G PD +TYN +I+ CR +L+ A K+ ++ + +
Sbjct: 1361 VHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNL 1419
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIM 348
N + + + + GD N A+ M
Sbjct: 1420 NASSFNPIFGCISKLGDVNSAHRM 1443
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 43/300 (14%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
+K AF +S L+ RR + + SL ++ +++G +AG I A
Sbjct: 1247 DKIAFSVVISSLSKKRRAIEAQSFFD---SLKDRFEPDVVVYTSLVHGWCRAGNISEAER 1303
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F +M + G V + + + L S + E+ + + +FN +++
Sbjct: 1304 VFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMID-VGCDPNAITFNNLMRVH 1362
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC---- 252
+ G +K V +M++LG PD ITY LI + +D+ E + N V KGC
Sbjct: 1363 VKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILN-SVKKGCNLNA 1421
Query: 253 -------------------------------FPNLATFNVRIQHLVNKRRSWQANKLMGL 281
PN T+N+ ++ +K+ + KL
Sbjct: 1422 SSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKE 1481
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR-LMPNRKIYQTMIHYLCQEG 340
M IEP+ TY ++I FC GH + A + M+ + L P+ +Y+ ++ L + G
Sbjct: 1482 MDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAG 1541
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
+++ G P+ Y +I K + ++ L +LM + + TF + ++ V
Sbjct: 1171 LEEFGHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGL 1228
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ +A M+ +G +PD++ +++VI + A+ + + L R P+ +Y +
Sbjct: 1229 AAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDS-LKDRFEPDVVVYTS 1287
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
++H C+ G+ + A + + P+V T S +++ L ++ Q +A+ + +
Sbjct: 1288 LVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFS 1341
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
F + + L ++F + L+E + ++ F + I+ Y +A +K A++TF M
Sbjct: 167 GFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKDTFKL-IVRRYARARKVKEAVETFEKM 225
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
++G K + N + L++S+ +K QA E+ K D+ ++ ++++ +
Sbjct: 226 SIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKD 285
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
L + EM G++PDV+ Y LISAF K + + ++ M GC P+ + +
Sbjct: 286 LLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCM 345
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I L ++ R +A K ++ G + T N V+ +CR+ + A K+ M +
Sbjct: 346 LINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECK 405
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAY 346
+ PN + Y ++HYL + F AY
Sbjct: 406 IGPNSRTYDVILHYLIKSQKFEEAY 430
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 7/257 (2%)
Query: 105 HQKSLPQGRREGFIMRIMML--YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL-T 161
+Q+ + G R + M++ + K+G A+ FY+M GC + + L +
Sbjct: 293 YQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGS 352
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E R +A++ F E +K ++ + N V+ A+C + A+ ++ EM++ + P+
Sbjct: 353 EERLDEALKYF--EQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNS 410
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
TY ++ K + E ++ M GC P L T+ + + + R A +
Sbjct: 411 RTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQ 470
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M G+ P ++ +I G C L+ A + ML + + P +++ + L + G
Sbjct: 471 MGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGR 530
Query: 342 FNLAYIMCK--DSMKKN 356
+LA M D+++K
Sbjct: 531 ISLAQEMASKLDAIRKT 547
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKV 313
L+ +N I L ++ +A + M+R G PD TY ++++G+ L M K +
Sbjct: 233 ELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTM 292
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
Y M+ + P+ Y +I C+ G + A + + +PS L+ GL
Sbjct: 293 YQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGS 352
Query: 374 NNQ 376
+
Sbjct: 353 EER 355
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 20/267 (7%)
Query: 139 YDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCE 198
Y + G R ++ ++ ALK+ LK Q + EVP ++NI+I +
Sbjct: 150 YSTLISGLCRELRGVSEALKLFGSV--LK--QGYEPEVP----------TYNILIDGLLK 195
Query: 199 MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLAT 258
+++A+ + + K G++PD ITYT I K R E + M KGC P++ +
Sbjct: 196 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 255
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
N I L ++R +A L+ M+ G P+ +++N +I G CR+G A + ML
Sbjct: 256 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315
Query: 319 GRRLMPNRKIYQTMIHYLC---QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
R + P Y ++ LC QEG A + ++K VP V T SAL++GL K
Sbjct: 316 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 375
Query: 376 QPCKANTIMALVQRR--VPH-FSSNQL 399
+ A ++ ++ + +P+ ++ N L
Sbjct: 376 KLDDARRLLGAMEAKGCIPNVYTYNSL 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 21/254 (8%)
Query: 139 YDMHLYG-CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
Y+ L+G CK V L+ ALK+ D + F VP D+ ++N +I FC
Sbjct: 48 YNTLLHGFCK--VGELDEALKIF----DGAVKRGF---VP-------DVVTYNALINGFC 91
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ LD+A ++ M + PDV+TY +L++ K+ R + L+V KG PN+
Sbjct: 92 KADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVI 148
Query: 258 TFNVRIQHLVNKRRS-WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T++ I L + R +A KL G + + G EP+ TYN++I G + ++ A +++S
Sbjct: 149 TYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 208
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
++ L P+ Y I LC+ G A +M KD +K VP V + +A++ GL K +
Sbjct: 209 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 268
Query: 377 PCKANTIMALVQRR 390
+A +++ ++ +
Sbjct: 269 VDEAEVLLSGMEAK 282
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG ++ A+ DM GC V S NA + L + + + + L + K +
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK-GCSPNA 288
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK---DNRPEIGNGL 243
SFN +I C G KA EM K GVKP V+TY L+ K + R + L
Sbjct: 289 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 348
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ M+ KG P++ T++ I L + A +L+G M+ G P+ TYN +I G C
Sbjct: 349 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 408
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+D A +++ AM+ + +P+ Y T+I
Sbjct: 409 LEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 44/336 (13%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMD 136
N+ + +S L R + L +++ + G + +L+G K G + A+
Sbjct: 9 NRITYNALLSGLCNGGRMSDAQAL--YERMIKAGYSPDVVTYNTLLHGFCKVGELDEALK 66
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F G V + NA + ++ L Q L + + ++ D+ ++N ++
Sbjct: 67 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-NLVPDVVTYNSLVNGL 125
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP-EIGNGLWNLMVCKGCFPN 255
C+ G +D+A +++V+ G P+VITY+TLIS ++ R L+ ++ +G P
Sbjct: 126 CKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG---------- 305
+ T+N+ I L+ + R +A +L + + G+EPD +TY + I G C++G
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242
Query: 306 -------------------------HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+D A+ + S M + PN + T+I C+ G
Sbjct: 243 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 302
Query: 341 DFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ A K+ +K+ P+V T + L++GL K Q
Sbjct: 303 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 338
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M+K G P+ ITY L+S R L+ M+ G P++ T+N +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A K+ + G PD VTYN +I GFC++ LD A+++ M+ L+P+ Y +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+++ LC+ G + A ++ D K + P+V T S L+ GL
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGL 157
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G +PN T+N + L N R A L M + G PD VTYN ++ GFC+ G LD A
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
K++ + R +P+ Y +I+ C+ + A + + + +N VP V T ++L+ G
Sbjct: 65 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124
Query: 371 LKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
L KN + +A M +V + FS N ++ + +++S
Sbjct: 125 LCKNGRVDEAR--MLIVDK---GFSPNVIT-YSTLIS 155
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S N VI C+ +D+A +++ M+ G P+ I++ TLI + + + +
Sbjct: 252 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 311
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKR---RSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M+ +G P + T+N+ + L R R +A L M G PD VTY+ +I G
Sbjct: 312 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 371
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
++G LD A+++ AM + +PN Y ++I LC + A + ++K VP
Sbjct: 372 GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVP-- 429
Query: 362 DTIS 365
DTI+
Sbjct: 430 DTIT 433
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G P+ +TYN ++ G C G + A+ +Y M+ P+ Y T++H C+ G+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
+ A + ++K+ +VP V T +AL+ G K ++ +A I+ QR V +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL---QRMVSENLVPDVVT 117
Query: 402 FKSILS 407
+ S+++
Sbjct: 118 YNSLVN 123
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G IK A+ F M G V + +A + L ++ L + L + K I ++
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP-NV 396
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
+++N +I C + +D+A + V M + G PD ITY T+ISA
Sbjct: 397 YTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 154/327 (47%), Gaps = 17/327 (5%)
Query: 16 AAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRI 75
++ D + + + + N P + LVD L + + D + LF+ A +R+
Sbjct: 55 GSSDDEVFKSLVHDEACNAIPMSQNLVDVLLH-------RFKDDWKSALGLFRW-AESRL 106
Query: 76 VIENK-YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR--REGFIMRIMMLYGKAGMIK 132
E+ A++ V L ++ D + L+E + QG R + + M AG +
Sbjct: 107 GYEHAPEAYDMMVDILGKLKQVDKMRALMEEMR---QGNLVRLSTVAKAMRRLAGAGEWE 163
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+ F D+ + ++ +S+N L L + R ++ +A +E+ K HI + +FNI
Sbjct: 164 DAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLEL--KPHISPNTHTFNIF 221
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I +C+ +D+A + EM+ G +P VI+Y+T+I ++ + + L + M +GC
Sbjct: 222 IHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGC 281
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
PN+ T+ + L + +A ++ M+ G +PD + YN +I R+G L A +
Sbjct: 282 APNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVR 341
Query: 313 VYSAMLGRR-LMPNRKIYQTMIHYLCQ 338
V+ + + + PN Y +MI C
Sbjct: 342 VFEVEMPKTGVPPNTSTYNSMIAMFCH 368
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 10/255 (3%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM--RIMMLYGKAGMIKHAMD 136
N + F + A R D E ++ K G R I I+ Y + + +
Sbjct: 214 NTHTFNIFIHGWCKANRVDEAEWTIQEMKG--HGCRPCVISYSTIIQSYCRQSNFRKVYE 271
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQFDIFSFNIVIKA 195
DM GC V + + LT+ + A+Q + E + D +N +I
Sbjct: 272 LLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQ--IAERMRSVGCKPDTLFYNALIHT 329
Query: 196 FCEMGILDKAYLVM-VEMQKLGVKPDVITYTTLISAFYKDNRPEIG-NGLWNLMVCKGCF 253
G L +A V VEM K GV P+ TY ++I+ F ++ + N L + C
Sbjct: 330 LGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCK 389
Query: 254 PNLATFNVRIQHLVNKRR-SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ T+ ++ + +N L ++ + + D Y L+I G CR+ +
Sbjct: 390 PDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYN 449
Query: 313 VYSAMLGRRLMPNRK 327
++ M+G+ + P K
Sbjct: 450 LFEEMVGKAITPRYK 464
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++++++ ++ +DK +M EM++ +++ +T+ A R G G W
Sbjct: 114 AYDMMVDILGKLKQVDKMRALMEEMRQ----GNLVRLSTVAKAM----RRLAGAGEWEDA 165
Query: 248 VCKGCFPNLATF---------NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
V F +L F N+ + L +R+ QA + L + I P+ T+N+ I
Sbjct: 166 V--RVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIF-LELKPHISPNTHTFNIFI 222
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G+C++ +D A+ M G P Y T+I C++ +F Y + D +
Sbjct: 223 HGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCA 282
Query: 359 PSVDTISALLEGLKKNNQ 376
P+V T + ++ L K Q
Sbjct: 283 PNVVTYTTIMCSLTKVEQ 300
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F ++ Y +AG ++ A + F + G + ++ A + + ++A + L ++
Sbjct: 240 FYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDM 299
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
+ + + FN +I +C G++DKA + M+++G++ DV TY TL + NR
Sbjct: 300 QLR-GVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNR 358
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L ++M G N ++ I + +A +L M+ G P VTYN+
Sbjct: 359 MEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNV 418
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+I G+ +SG + A++ M + L+P+ Y ++H C G ++A + ++ ++
Sbjct: 419 MIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRG 478
Query: 357 WVPSVDTISALLEGLKKNNQPCKA 380
P+V +AL+ GL K + +A
Sbjct: 479 AKPNVVAYTALISGLAKEGRSEEA 502
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M G + TV + + L+ + D+ +++ E+ K ++ D++ ++ VI A+C
Sbjct: 193 EMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRK-NVAGDVYFYSAVINAYCRA 251
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + +A V E G++P+ TY LI+ F K + E L M +G N F
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I +A ++ +M+R GI+ D TYN + G CR ++ AKK+ M
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ N Y T+I +EGD A + +D K PSV T + +++G K+
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS 428
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALK------VLTESRDLKAIQAFLMEVPEKF 180
K G I+ A DM L G N + ++ ++ ++KA+ E+
Sbjct: 285 KIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVM-------ERM 337
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
IQ D++++N + C + ++ A ++ M + GV+ + ++YTTLIS K+
Sbjct: 338 GIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEA 397
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M KG P++ T+NV I + +A + M++ G+ PD TY ++ G
Sbjct: 398 RRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHG 457
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C +G +D+A +++ M R PN Y +I L +EG A+ + + P
Sbjct: 458 HCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPD 517
Query: 361 VDTISALLEG 370
DT+ ++L G
Sbjct: 518 -DTLYSMLVG 526
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S ++V+ FC+ G +D A ++ EM + GVK + Y L+ + + +
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P + T+ + + L + + ++R + D Y+ VI +CR+G+
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A +V+ +G + PN + Y +I+ C+ G A ++ D + + +
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
+++G ++ KA I A+++R
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMER 336
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 5/243 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG + A +M +G K N L T ++ + L E+ E ++ +
Sbjct: 145 KAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM-ESGGVEPTV 203
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ I++ G + K V E+++ V DV Y+ +I+A+ + + +++
Sbjct: 204 GTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDE 263
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
V G PN T+ I + A L+ MQ G+ +++ +N +I G+CR G
Sbjct: 264 CVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGM 323
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ----EGDFNLAYIMCKDSMKKNWVPSVD 362
+D A ++ + M + + Y T+ LC+ E L +IM ++ ++ N+V
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383
Query: 363 TIS 365
IS
Sbjct: 384 LIS 386
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ ++ K G + A F DM G + +V + N + +S ++ + F E+ EK
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEM-EKK 442
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D++++ ++ C G +D A + EM++ G KP+V+ YT LIS K+ R E
Sbjct: 443 GLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
++ M+ G P+ +++ + L +R
Sbjct: 503 FQFYDNMLAAGLTPDDTLYSMLVGSLHTDKR 533
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD- 185
+ G + AM DM G + N ++ + F E+ I +
Sbjct: 373 RGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFW---KEQLRIGWPP 429
Query: 186 -IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ + +++ C+ +A V+ E+ G +PDV+TY LISA K +R + +
Sbjct: 430 YVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTIL 489
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ +G PN T+ + + L NKRR + L+ M+R EPD YN+ I FC+
Sbjct: 490 TRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKY 549
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
GHLD A V M+ + P+ Y T+++ + +EG A ++ + W + T
Sbjct: 550 GHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITY 609
Query: 365 SALLEGLKKNNQPCKA 380
+ L++ L + KA
Sbjct: 610 NTLIDALANKGEVKKA 625
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 34/248 (13%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM----------------- 174
K AM+ ++ L GC+ V + NA + ++ LK + L
Sbjct: 448 KRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCIL 507
Query: 175 -----------EVPE------KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
EV + + + + D+ ++NI I FC+ G LD+A V+ +M
Sbjct: 508 LHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKC 567
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD++TY TL++A K+ E + + + G L T+N I L NK +A
Sbjct: 568 CPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMV 627
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
L M I PD++TY ++ GFC+ + A ++ + L + +I LC
Sbjct: 628 LFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALC 687
Query: 338 QEGDFNLA 345
++G A
Sbjct: 688 RDGKVEAA 695
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + N++I C G L A V+ +M+ G P+ IT+ TLI + + W
Sbjct: 360 DTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFW 419
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ G P + T + + + K S +A +++ + G +PD VTYN +I C++
Sbjct: 420 KEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKA 479
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
L AK + + ++ L PN Y ++H LC +
Sbjct: 480 DRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNK 514
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 73/156 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N ++ A + G++++A ++ +++ G + +ITY TLI A + L+
Sbjct: 570 DIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLF 629
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M P+ T+ + K S +A +L+ G + T+ +VI+ CR
Sbjct: 630 DEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALCRD 689
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ A ++ M+ N Y +++ + + G
Sbjct: 690 GKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSG 725
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV G P+ I+ LV ++ +A +++ +M G PD +T N++I CR G
Sbjct: 317 MVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLIAQLCRGGQ 376
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L A V M PN + T+I +C + ++ A K+ ++ W P V T +
Sbjct: 377 LSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPPYVMTNTL 436
Query: 367 LLE 369
L++
Sbjct: 437 LVD 439
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
++ +C G L +A V+ EM G PD LI K + + +MV G
Sbjct: 298 LRRYCNNGKLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGG 357
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T N+ I L + A ++ M+ G P+ +T+N +I+ C D A
Sbjct: 358 IPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAIT 417
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ L P ++ +C++ A + + + P V T +AL+
Sbjct: 418 FWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASC 477
Query: 373 KNNQPCKANTIMA 385
K ++ A TI+
Sbjct: 478 KADRLKDAKTILT 490
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 7/202 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES---RDLKAIQAFLMEVPEKFH 181
+ K G + A+D M C + + N L +++ + I F+ +
Sbjct: 546 FCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFI----RQNG 601
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
Q + ++N +I A G + KA ++ EM + PD ITY +L+ F K N E
Sbjct: 602 WQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEAL 661
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L N + G TF + IQ L + A +++ +M + Y +++
Sbjct: 662 ELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRV 721
Query: 302 CRSGHLDMAKKVYSAMLGRRLM 323
+SG ++ A++++ ++ +++
Sbjct: 722 AKSGRIEEAERLHQELIDCKIL 743
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K+ ++ + SFN ++ + ++G LD+ + + MQ GV+PDV TY+ LI+ K+++ +
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
N L++ M+ G PN TF I R A ++ M + D +TYN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLI 283
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G L A+ + M + L P++ Y T+I C+EGD A+ K +K+N
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM 384
+AL+ GL + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKML 369
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G I+ A F + + + +V S N + + DL + F L
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD--EGFRLKN 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+ +Q D+++++++I C+ +D A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ M+ + +L T+N I L K QA L+ M G++PD++TY
Sbjct: 256 RVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
+I G C+ G L+ A + M+ + + Y +I LCQEG A M ++ +
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 356 NWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P + T + ++ K + ++ +QR
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 99/185 (53%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++ FNI++ +F + G + A V + K ++P V+++ TL++ + K + G L N
Sbjct: 136 LYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G P++ T++V I L + + AN+L M G+ P+ VT+ +I G C++G
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D+A ++Y ML + L + Y T+I+ LC++GD A + + K P T +
Sbjct: 256 RVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315
Query: 366 ALLEG 370
L++G
Sbjct: 316 TLIDG 320
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + M + + N + L + DLK Q + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMK-GLKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS ++ R +
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
M+ G P + T+ + I K W +KL+ MQR G P VT
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
LKV+ +S L ++ E+ I+ D ++I+I C+ G LD A+ + EM+
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G K D+I YTTLI F R + G L M+ + P++ F+ I V + + +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN---------- 325
+L M + GI PD VTY +I GFC+ LD A + M+ + PN
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 326 --------------RKI-----------YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
RK+ Y T+I C+ G +A + ++ + + P
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQR 389
+ + LL+GL N +P KA I +++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G K + ++ + L ++ ++ I D+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDV 317
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+ +I F + G L +A + EM + G+ PD +TYT+LI F K+N+ + N + +L
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 247 MVCKGCFPNLATFNVRI-----------------------------------QHLVNKRR 271
MV KGC PN+ TFN+ I Q +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
A +L M + PD V+Y +++ G C +G + A +++ + ++ + IY
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+IH +C + A+ + K P V T + ++ GL K +A+ +
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 102/205 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FNI+I +C+ ++D + +M GV D +TY TLI F + + E+ L+
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + P++ ++ + + L + +A ++ +++ +E D YN++I G C +
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P+ K Y MI LC++G + A ++ + + P+ T
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ L+ K+ ++ ++R
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKR 590
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 136/306 (44%), Gaps = 3/306 (0%)
Query: 88 SRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCK 147
S + + D ++ E +S P+ R F R+ + + +D M L G
Sbjct: 46 SGIVDIKEDDAVDLFQEMTRSRPRPRLIDF-SRLFSVVARTKQYDLVLDLCKQMELKGIA 104
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+ +L+ + R L + + ++ K + D +F+ +I C G + +A
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ M ++G KP +IT L++ + + L + MV G PN T+ ++ +
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
++ A +L+ M+ I+ D V Y+++I G C+ G LD A +++ M + +
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI-MAL 386
IY T+I C G ++ + +D +K+ P V SAL++ K + +A + +
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 387 VQRRVP 392
+QR +
Sbjct: 344 IQRGIS 349
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N ++ C G + A L++ M + G +P+ +TY ++ K + + L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M + + +++ I L A L M+ G + D + Y +I+GFC +G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D K+ M+ R++ P+ + +I +EG A + K+ +++ P T +
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 366 ALLEGLKKNNQPCKANTIMALV 387
+L++G K NQ KAN ++ L+
Sbjct: 357 SLIDGFCKENQLDKANHMLDLM 378
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F E EK ++ DI +NI+I C +D A+ + + GVKPDV TY
Sbjct: 475 KALEIF--EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I K + L+ M G PN T+N+ I+ + + + ++ KL+ ++R G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 287 IEPDEVTYNLVI----KGFCRSGHLDM 309
D T +V+ G + LDM
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDM 619
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ I+I+A G +++A ++ EM G+ PD+ TY +I K+ E L
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ KGC P++ ++N+ ++ +N+ + + KL+ M G EP++VTY+++I CR G
Sbjct: 277 SLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 336
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A V M+ + L P+ Y +I LC+EG +LA + + +P + +
Sbjct: 337 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 396
Query: 366 ALLEGLKKNNQPCKA 380
+L L KN +A
Sbjct: 397 TILAALCKNGNANQA 411
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K GM++ A + + GC+ V S N L+ + + E+ + + +
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPNK 322
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++I+I + C G +D+A V+ M + + PD +Y LISA K+ R ++ G+ +
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC P++ +N + L + QA ++ ++ G P+ +YN +I G
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A + AM+ + + P+ Y ++I LC++G A + D + + P+V + +
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502
Query: 367 LLEGLKK 373
+L GL K
Sbjct: 503 VLLGLCK 509
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N +I+ C+ G++++A ++ + G +PDVI+Y L+ AF + + G L
Sbjct: 251 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLV 310
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC PN T+++ I L R +A ++ +M + PD +Y+ +I C+
Sbjct: 311 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD+A + M+ +P+ Y T++ LC+ G+ N A + P+V +
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430
Query: 365 SALLEGL 371
+ ++ L
Sbjct: 431 NTMISAL 437
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ E H + D+F++N VI FC++ ++ A V+ M+ G PD++TY +I +
Sbjct: 135 VMEILES-HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 193
Query: 233 KDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
NR ++G L L ++ C P + T+ + I+ + + +A KL+ M G+ PD
Sbjct: 194 --NRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 251
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
TYN +I+G C+ G ++ A ++ +++ + P+ Y ++ +G ++ +
Sbjct: 252 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVA 311
Query: 351 DSMKKNWVPSVDTISALLEGL 371
+ + P+ T S L+ L
Sbjct: 312 EMFSRGCEPNKVTYSILISSL 332
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N ++ A C+ G ++A + +++ +G P+V +Y T+ISA + G+
Sbjct: 391 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 450
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P+ T+N I L +A L+ M++ G P ++YN+V+ G C+
Sbjct: 451 PAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 510
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+D A +++ M+ + PN Y +I
Sbjct: 511 RRIDDAIGMFAEMIEKGCRPNETTYILLIE 540
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I A G +A ++ M G+ PD ITY +LIS +D E GL
Sbjct: 426 NVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P + ++N+ + L RR A + M G P+E TY L+I+G +
Sbjct: 486 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFA 545
Query: 305 GHLDMAKKVYSAMLGRRLM 323
G A ++ +++ R ++
Sbjct: 546 GWRTEAMELANSLFSRDVI 564
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ G +++ + + G PDVI T LI F+ E + + ++ P++
Sbjct: 89 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDV 147
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+N I + A +++ M+ G PD VTYN++I C L +A V
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+L MP Y +I EG N A + ++ + + +P + T +A++ G+ K
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KAG I+ A + F +M YGCK N L + + + + ++ ++ I DI
Sbjct: 997 KAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDI 1055
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ I+I C+ G L+ ++ ++G++PD+ITY LI K R E L+N
Sbjct: 1056 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1115
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG PNL T+N I HL ++ +A K+ + G +P+ TYN +I+G+ SG
Sbjct: 1116 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1175
Query: 307 LDMAKKVYSAMLGRRLMPN 325
D A Y M+ +PN
Sbjct: 1176 TDSAYAAYGRMIVGGCLPN 1194
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 10/327 (3%)
Query: 51 LVKLKAERDPEKLFQLFKA-NAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLL---EHQ 106
+V RD E + L + AH V N Y++ + L A+RFD +L E++
Sbjct: 327 MVAFGKRRDVETVLWLLREMEAHG--VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE 384
Query: 107 KSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
P +++++ AG I A D F+ M K + L ++ D
Sbjct: 385 GCKPDVITHTVLIQVLC---DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 441
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+++ + + ++ ++ VI A C++G + +A + EM++ G+ P+ +Y +
Sbjct: 442 QSVMEIWNAMKADGY-NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 500
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
LIS F K +R L+ M G PN T + I + S +A + LM+ G
Sbjct: 501 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 560
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
I PD V N V+ G +SG L MAK+V+ + + P+ Y MI + F+ A
Sbjct: 561 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 620
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKK 373
+ D ++ N VP V +++L++ L K
Sbjct: 621 KIFYDMIENNCVPDVLAVNSLIDTLYK 647
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFD 185
KA A++ F M ++G K + + +S + +KAIQ + E+ + I D
Sbjct: 507 KADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRY--ELMKSKGIVPD 564
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N V+ + G L A V E++ +GV PD ITYT +I K ++ + ++
Sbjct: 565 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 624
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ C P++ N I L R +A ++ ++ +EP + TYN ++ G R G
Sbjct: 625 DMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREG 684
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+ + M PN Y T++ LC+ G N A M K +P + + +
Sbjct: 685 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYN 744
Query: 366 ALLEGLKKNNQPCKANTIMALVQR-RVPHFSS 396
++ GL K + +A +I +++ +P +++
Sbjct: 745 TVIYGLVKEERYNEAFSIFCQMKKVLIPDYAT 776
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 9/279 (3%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
D E L K L G E ++ GK+ I+ + +MH G + T + N
Sbjct: 896 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 955
Query: 156 ALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
+ L +SR L +AI + + + F ++ ++ + G ++ A + EM +
Sbjct: 956 IISGLVKSRRLEQAIDLYYNLMSQGFSPT--PCTYGPLLDGLLKAGRIEDAENLFNEMLE 1013
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ 274
G K + Y L++ E L+ MV +G P++ ++ + I L ++ Q
Sbjct: 1014 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC---KAGQ 1070
Query: 275 ANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
N + ++ G+EPD +TYNL+I G +S L+ A +++ M + ++PN Y +
Sbjct: 1071 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1130
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+I +L + G A M ++ + K W P+V T +AL+ G
Sbjct: 1131 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1169
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKV-LTESRDLKAIQAFLMEVPEKFHIQF---- 184
+IKH + + + KS +LK L S + L+++ E +
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 185 ---DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
D F++N+++ A + +++ V EM + G + +TY T+IS K R E
Sbjct: 911 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ ++ +G P T+ + L+ R A L M +G + + YN+++ G
Sbjct: 971 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 1030
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+G+ + ++ M+ + + P+ K Y +I LC+ G N + ++ P +
Sbjct: 1031 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1090
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR--VPH-FSSNQL 399
T + L++GL K+ + +A ++ +Q++ VP+ ++ N L
Sbjct: 1091 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL 1131
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Query: 99 IEHLLEHQKSLP-QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
IE +L+ Q+ + +G ++ ++ G K+ ++ A+D +Y++ G T +
Sbjct: 931 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 990
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L L ++ ++ + E+ E + + + +NI++ G +K + +M
Sbjct: 991 LLDGLLKAGRIEDAENLFNEMLE-YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 1049
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+ PD+ +YT +I K + G + ++ G P+L T+N+ I L +R +A
Sbjct: 1050 GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 1109
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L MQ+ GI P+ TYN +I ++G A K+Y +L + PN Y +I
Sbjct: 1110 VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1169
Query: 336 LCQEGDFNLAY 346
G + AY
Sbjct: 1170 YSVSGSTDSAY 1180
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+++ +M +G+ G + D M K V + A L L++ L V
Sbjct: 220 YMLELMRGHGRVGDMAEVFDV---MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVAL-PV 275
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
++ I + +++N ++ + G +A V M GV P V TY+ L+ AF K R
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK--R 333
Query: 237 PEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ LW L M G PN+ ++ + I+ L +R +A +++ M+ G +PD +T+
Sbjct: 334 RDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITH 393
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD----FNLAYIMCK 350
++I+ C +G + AK V+ M P+R Y T++ GD + M
Sbjct: 394 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKA 453
Query: 351 DSMKKNWVPSVDTISALLE 369
D N V I AL +
Sbjct: 454 DGYNDNVVAYTAVIDALCQ 472
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH---IQFDI 186
+I A F +M GC + N L + +S ++ +++V E+ H +
Sbjct: 895 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE----MLKVQEEMHRKGYESTY 950
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I + L++A + + G P TY L+ K R E L+N
Sbjct: 951 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 1010
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRR-SWQANKLMGLMQRF---GIEPDEVTYNLVIKGFC 302
M+ GC N +N+ L+N R + K+ L Q GI PD +Y ++I C
Sbjct: 1011 MLEYGCKANCTIYNI----LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 1066
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
++G L+ + +L L P+ Y +I L + A + + KK VP++
Sbjct: 1067 KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1126
Query: 363 TISALLEGLKKNNQPCKAN 381
T ++L+ L K + +A
Sbjct: 1127 TYNSLILHLGKAGKAAEAG 1145
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++++++ AF + ++ ++ EM+ GVKP+V +YT I + R + +
Sbjct: 320 VRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILA 379
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +GC P++ T V IQ L + R A + M++ +PD VTY ++ F +G
Sbjct: 380 KMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNG 439
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++++AM N Y +I LCQ G A M + +K VP + +
Sbjct: 440 DSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYN 499
Query: 366 ALLEGLKKNNQ 376
+L+ G K ++
Sbjct: 500 SLISGFLKADR 510
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 4/222 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL--KVLTESRDLKAIQAFLMEVPE 178
I+ + K G++K A+ D L +T +S +L +L ++ K+I+ E+
Sbjct: 780 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIE--FAEIIA 837
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
I D F +IK C+ +A+ ++ + + GV Y +LI +N +
Sbjct: 838 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 897
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
I GL+ M GC P+ T+N+ + + R + K+ M R G E VTYN +I
Sbjct: 898 IAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII 957
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +S L+ A +Y ++ + P Y ++ L + G
Sbjct: 958 SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 999
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 8/285 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
K G +K A D + M +GC+ V S N+ + + D+++ L + F +
Sbjct: 68 KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI SFN + F +M +LD+ ++ M M K P+V+TY+T I F K ++ +
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M PN+ TF I A L M+R + + VTY +I GFC+
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A+++YS M+ R+ PN +Y T+I Q GD + A + + +
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR--VPH---FSSNQLSAFKS 404
++ GL N + +A I+ +++ VP F++ + FKS
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F +I +C+ G L+ A + EM+++ + +V+TYT LI F K + ++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV PN + I + S A K + M G+ D Y ++I G C +
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A ++ M L+P+ I+ TM++ + G A M +++ + P V +
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 365 SALLEGLKKNNQ 376
S +++G+ KN Q
Sbjct: 377 STMIDGIAKNGQ 388
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
S N+ + + + +K + + +P +F + D+ S+N +I C G + A LV+
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMP-RFGCEPDVISYNSLIDGHCRNGDIRSASLVLE 115
Query: 211 EMQK---LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ KPD++++ +L + F K + +M+ K C PN+ T++ I
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFC 174
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
A K M+R + P+ VT+ +I G+C++G L++A +Y M R+ N
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y +I C++G+ A M ++ P+ + +++G
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ DI ++ ++I C G L +A ++ +M+K + PD++ +TT+++A++K R +
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-PDEVTYNLVIKG 300
+++ ++ +G P++ + I + + +A + F IE ++V Y ++I
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------IVYFCIEKANDVMYTVLIDA 412
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
C+ G ++++S + L+P++ +Y + I LC++G+ A+
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K+G ++ A+ +F+ M V + + ++ DL+ + E+ + +
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-RRVRMSL 231
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +I FC+ G + +A + M + V+P+ + YTT+I F++ +
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G ++ + V I L + +A +++ M++ + PD V + ++ + +S
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
G + A +Y ++ R P+ TMI + + G + A +
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEK 179
+M Y K+G +K A++ ++ + G + V +L+ + + ++ L +AI F +E
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN- 402
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
D+ + ++I A C+ G + + ++ + G+ PD YT+ I+ K
Sbjct: 403 -----DVM-YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L MV +G +L + I L +K +A ++ M GI PD ++L+I+
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLM 323
+ + G++ A + M R L+
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLV 540
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 39/193 (20%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
PD T I N + +V +G P+ ++FN + + + A +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK-------------------------- 312
+ M RFG EPD ++YN +I G CR+G + A
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138
Query: 313 -----------VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PS 360
VY ++ + PN Y T I C+ G+ LA + SMK++ + P+
Sbjct: 139 FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA-LKSFHSMKRDALSPN 197
Query: 361 VDTISALLEGLKK 373
V T + L++G K
Sbjct: 198 VVTFTCLIDGYCK 210
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 35/289 (12%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G ++ + F M +GC V + N + L ++ +L L EV + D+
Sbjct: 210 RVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDV 269
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP--------------------------- 219
++ +I F ++G L+ A ++ EM + G++P
Sbjct: 270 MTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEK 329
Query: 220 --------DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
DV+T+T+LI + + +G +W++M + PN+ T++V I L R
Sbjct: 330 MASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNR 389
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A L+ ++ + P YN VI GFC++G++D A + + M +R P++ +
Sbjct: 390 IHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTI 449
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+I C +G A + K + P TIS+L+ L K +P +A
Sbjct: 450 LIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEA 498
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
FL + FH + ++FNI+I+ C +G ++K + + MQ G PDV+TY TLIS
Sbjct: 184 FLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGL 243
Query: 232 YKDNRPEIGNGLWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
K N + L + + C P++ T+ I + A+ L M R GIEP
Sbjct: 244 CKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPT 303
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
VT+N++I GF + G++ A+ ++ M +P+ + ++I C+ GD L +
Sbjct: 304 VVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLG-LKVW 362
Query: 351 DSMK-KNWVPSVDTISALLEGLKKNNQPCKANTIM 384
D MK +N P++ T S ++ L K+N+ +A ++
Sbjct: 363 DVMKARNVSPNIYTYSVIINALCKDNRIHEARDLL 397
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 6/307 (1%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM-LYGKAGMIKHAMDTFYDMHLYG 145
V+ A A +FD + L+ + + R F+ ++ K G + A+ F + +
Sbjct: 135 VTSFAQAGKFDLAKKLIIEVQG-EEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
+ N ++ L +++ + F L + F D+ ++N +I C+ LD+
Sbjct: 194 SPPNTWTFNILIRGLCRVGEVE--KGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDR 251
Query: 205 AYLVMVEMQ-KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ E+Q + PDV+TYT++IS F K + E + L+ M+ G P + TFNV I
Sbjct: 252 ACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLI 311
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
A + M + PD VT+ +I G+CR+G + + KV+ M R +
Sbjct: 312 DGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVS 371
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN Y +I+ LC++ + A + + + P + +++G K +AN I
Sbjct: 372 PNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVI 431
Query: 384 MALVQRR 390
+ ++ +
Sbjct: 432 VTEMEEK 438
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++I++ C+MG+ D +V+ M+ G D L+++F + + ++ L ++
Sbjct: 95 TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKL--II 152
Query: 248 VCKGCFPNLATF--NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+G +++F N + LV + +A L F P+ T+N++I+G CR G
Sbjct: 153 EVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVG 212
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN-WVPSVDTI 364
++ ++++AM +P+ Y T+I LC+ + + A + K+ +N P V T
Sbjct: 213 EVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTY 272
Query: 365 SALLEGLKK 373
++++ G +K
Sbjct: 273 TSIISGFRK 281
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 146/349 (41%), Gaps = 12/349 (3%)
Query: 31 SLNKFPNR--EPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRI----VIENKYAFE 84
SL +FP R L+ L + RDP + + H I + +K+ +
Sbjct: 64 SLRRFPGRLAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYS 123
Query: 85 DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF--IMRIMMLYGKAGMIKHAMDTFYDMH 142
VS LA A R D L+ + E F ++R M+ +AG +K A F M
Sbjct: 124 TVVSALADAGRVDDAVALVHEMVADGVVAAEAFNPVLRAML---RAGDVKGAAKLFEFMQ 180
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
L GC T + N + L A +M E+ + + ++ V+ G +
Sbjct: 181 LKGCVPTAATYNVLVHGLLVCGRAGAAMG-VMRRMEREGVVPGVMTYGAVVDGLVRCGRV 239
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
A+ V EM++ G+ + Y+T+I+ F K + +W MV PN+ ++
Sbjct: 240 KDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAM 299
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L N + +A L M P+ +TY +I+G+ + G A V+ M+G
Sbjct: 300 IGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGC 359
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
MPN Y +I+ LC G A ++ K + + P +++++GL
Sbjct: 360 MPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGL 408
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN V++A G + A + MQ G P TY L+ R G+ M
Sbjct: 155 AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRM 214
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+G P + T+ + LV R A K+ M+R G+ +E Y+ VI GFC+SG +
Sbjct: 215 EREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEI 274
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
D A KV+ AM+ + PN +Y MI L G A ++ ++ + P++ T ++
Sbjct: 275 DCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSM 334
Query: 368 LEGLKKNNQPCKANTI 383
++G K +A ++
Sbjct: 335 IQGYFKIGDTSRALSV 350
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S++I+I C +G L A +V M G PD I YT++I + G L+ M
Sbjct: 365 SYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDM 424
Query: 248 VCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF----- 301
+ G P++ ++NV + L+ + +A L+ M G +PD VT N+ ++ F
Sbjct: 425 LASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGER 484
Query: 302 -------------CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
C A +V ML + ++P I++ ++ +C+
Sbjct: 485 KGREFLEGLVVRLCDRRRNMAAGEVLMVMLAKYIVPEAPIWEMVVRDVCR 534
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 98/185 (52%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I FC+ LD+A V +M + G P+V TY++LI +KD R ++ + + M+
Sbjct: 683 YDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ + I L ++ +A KLM +M+ G +P+ VTY +I GF ++G +D
Sbjct: 743 ENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVD 802
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
+++ M + PN Y +I++ C G + AY + ++ + W V + ++
Sbjct: 803 KCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI 862
Query: 369 EGLKK 373
EG K+
Sbjct: 863 EGYKR 867
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 51/257 (19%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++ I+I F + GI+ +A+ + EM + G +P V+TYTTLI A+ K + + N L+
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582
Query: 245 NLMVCKGCFPNLATFNVRI----------------------------------------- 263
LM+ KGCFPN+ T+ I
Sbjct: 583 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 642
Query: 264 ----------QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
L + A L+ M G EP+ + Y+ +I GFC++ LD A++V
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ PN Y ++I L ++ +L + ++ + P++ + +++GL K
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762
Query: 374 NNQPCKANTIMALVQRR 390
+ +A +M +++ +
Sbjct: 763 VAKTDEAYKLMLMMEEK 779
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 17/268 (6%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG+IK A + +M GC+ TV + + +++ + ++ L E+
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV-SVANELFELMIAKGCFP 592
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQ----------------KLGVKPDVITYTTLI 228
++ ++ +I +C+ G ++KA + M+ + KP+V+TY L+
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
K ++ + L M GC PN ++ I + +A ++ M G
Sbjct: 653 DGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYN 712
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ TY+ +I + LD+ KV S ML PN IY MI L + + AY +
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772
Query: 349 CKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+K P+V T +A+++G K +
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGFGKAGK 800
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA + A + F+ M +G V + ++ + L + + L + L ++ E
Sbjct: 690 FCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN-SCAP 748
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I + +I ++ D+AY +M+ M++ G KP+V+TYT +I F K + + L+
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL-------------------------- 278
M KGC PN T+ V I H +A L
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868
Query: 279 ----MGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMA----KKVYSAMLGRRLMPNRK 327
+GL++ G P + Y ++I F ++G L++A K+V SA + + +
Sbjct: 869 FILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS--MAAKKN 926
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+Y ++I+ A+ + D ++ +P + T LL GL
Sbjct: 927 LYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGL 970
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G+ A++ + +G K T + NA ++V + L Q E+ E + D F+
Sbjct: 220 GLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE-LGLSMDEFT 278
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+A C++G +A L ++E + P+ I Y +IS + + E N M
Sbjct: 279 LGFFAQALCKVGKWREA-LSLIEKEDF--VPNTILYNKMISGLCEASFFEEAMDFLNRMR 335
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C PN+ T+ + + +NK++ + +++ +M G P +N ++ +C+S
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
A K+ M P +Y +I +C G+
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL-- 202
GC + N+ + +S D L ++ EK + +NI+I + C G L
Sbjct: 373 GCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPG 431
Query: 203 -------DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+KAY M+ + K +V+++ + F + E + + M+ G P+
Sbjct: 432 PVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPD 488
Query: 256 LATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+T++ I L N R A L M+ G+ PD TY ++I F ++G + A
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M+ P Y T+IH + ++A + + + K P+V T +AL++G K+
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608
Query: 376 QPCKANTIMA 385
KA I A
Sbjct: 609 NIEKACQIYA 618
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 9/268 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-MEVPEKFHIQFD 185
+A + AMD M C V++ L + L + L M + E + +
Sbjct: 320 EASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYT 379
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP------EI 239
IF N ++ A+C+ AY ++ +M+K KP + Y LI + E+
Sbjct: 380 IF--NSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFEL 437
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+N M+ G N + L + +A K++ M G PD TY+ VI
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIG 497
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
C + ++ A ++ M G ++P+ Y +I + G A+ + ++ P
Sbjct: 498 FLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEP 557
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALV 387
+V T + L+ K + AN + L+
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELM 585
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 17/225 (7%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW--- 244
++N +++ F LD A LV EM +LG+ D T A K G W
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK-------VGKWREA 295
Query: 245 -NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+L+ + PN +N I L +A + M+ P+ TY +++ G
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLN 355
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
L K++ S M+ P+ I+ +++H C+ DF+ AY + K K P
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSK 408
+ L+ + C + V + + N++ + ++L+K
Sbjct: 416 YNILIGSI------CSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 3/209 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQK--LGVKPDVITYTTLISAFYKDNRPEIGNG 242
++++ N+V+K FC G DKA + +M++ V PD +TY TL++ F K R
Sbjct: 111 NVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARV 170
Query: 243 LWNLMVCKG-CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ M G C PNL T++V I + L+ M+R G++ D Y+ +I F
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G ++ ++++ ML R++ PN Y ++ L + G + A M KD + P V
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRR 390
+ L +GL KN + A ++ L+ ++
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQK 319
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 103/187 (55%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++++I +C+ G + + ++ EM++ G+K DV Y++LISAF + E G L+
Sbjct: 184 NLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELF 243
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ + PN+ T++ +Q L R +A++++ M G+ PD V Y ++ G C++
Sbjct: 244 DEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKN 303
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A KV M+ + P Y +++ LC+E + A+ + + +KK P T
Sbjct: 304 GRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTY 363
Query: 365 SALLEGL 371
+ LL+GL
Sbjct: 364 NTLLKGL 370
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+E E+ ++ D+F ++ +I AFC G ++ + EM + V P+V+TY+ L+
Sbjct: 207 LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ R + + M +G P++ + V L R+ A K++ LM + G EP +
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK-- 350
TYN+V+ G C+ +D A V M+ + P+ Y T++ LC G + A + K
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQ 376
S K + P V T + L++GL K +
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGR 412
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 145 GCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
G K + N LK L + + +A+ + + + EKFH++ D+F+ N +I+ C+ G +
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + M ++G++ +++TY LI + + LW V G PN T++V I
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMI 474
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEP---------------------------------- 289
L + A L M+ GI P
Sbjct: 475 NGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHN 534
Query: 290 -DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
D V++N++I G ++G + AK++ S M L+P+ + +I+ + G + A +
Sbjct: 535 VDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGL 594
Query: 349 CKDSMKKNWVPSVDTISALLEG 370
+ + VP V +LL+G
Sbjct: 595 YEKMVSCGHVPGVVVFDSLLKG 616
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLV--MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
D ++N ++K C G + +A + ++ +K VKPDV T LI K+ R
Sbjct: 359 DAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAAR 418
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
+ + MV G N+ T+N I+ + R+ +A KL G P+ +TY+++I G C
Sbjct: 419 IHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLC 478
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ L +A+ ++ M + P Y ++ LC+E A + ++ N V
Sbjct: 479 KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVV 538
Query: 363 TISALLEGLKK 373
+ + +++G K
Sbjct: 539 SFNIIIDGTLK 549
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +TLI K + + +++ MV P + + + VN A +
Sbjct: 40 PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR----LMPNRKIYQTMIH 334
+ LM + G + NLV+KGFCRSG D A ++S M +R ++P+ Y T+++
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM--KRNYDCVVPDCVTYNTLVN 157
Query: 335 YLCQEGDFNLAYIMCKDSMKK--NWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
C+ A ++ ++MKK + P++ T S L++ K+ + + ++ ++R
Sbjct: 158 GFCKAKRLAEARVLF-EAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ + +N ++ + C L++A + EM+ + DV+++ +I K +
Sbjct: 498 IRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAK 557
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIEPDEVTYNLVI 298
L + M P+ TF++ I + ++ MGL ++ G P V ++ ++
Sbjct: 558 ELLSEMFMMDLVPDAVTFSILINRF---SKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
KG+ G + + M + ++ + K+ T++ LC
Sbjct: 615 KGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCH 654
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAGM++ A+ F +M GCK T+ + N + L + R L E +
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 298
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I ++N +I+ F E + ++ M G KPDVITY LIS NR E L+
Sbjct: 299 TIVTYNSLIQGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 356
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M C PN+ TFN I+ L +++ +A ++ M PD T+N +I FC++
Sbjct: 357 NGMACA---PNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKA 409
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
G + A++V ML PN + H
Sbjct: 410 GAMHDAREVMKDMLKHGFYPNTYTTYALAH 439
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 19/276 (6%)
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
LP ++R + G+A ++ F +M G + ++S + L L++S +
Sbjct: 92 LPTSASHNILLRGFFMAGRA------IEFFKEMKASGVEPDLESYHILLSALSDSGRMAE 145
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
A DI ++N+++ +C++G +A +M E+ K G +P+V TY+ +I
Sbjct: 146 AHALF----SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 201
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ + K ++ E ++ M+ C PN TFN I A KL M++ G +
Sbjct: 202 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 261
Query: 289 PDEVTYNLVIKGFCRS-GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
VTYN +I C+ G + A +++ + G L P Y ++I + + L +
Sbjct: 262 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGL-RL 320
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+C + P V T + L+ GL C AN +
Sbjct: 321 LCH-MHAEGCKPDVITYNCLISGL------CSANRV 349
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N++I+ FC+ G + +A V +M+ G+ P+ T TL+ + + L+ M
Sbjct: 27 TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 86
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
P A+ N+ ++ R+ + K M+ G+EPD +Y++++ SG +
Sbjct: 87 QAGPFLPTSASHNILLRGFFMAGRAIEFFK---EMKASGVEPDLESYHILLSALSDSGRM 143
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++SAM P+ Y ++ C+ G A + K+ +K + P+V T S +
Sbjct: 144 AEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 200
Query: 368 L 368
+
Sbjct: 201 I 201
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
P+ TYN++I+GFC+ G + A V+S M L+PN T++ LC+ G + A +
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 349 CKDSMKKNWVPSVDTISALLEGL 371
++ ++P+ + + LL G
Sbjct: 83 FREMQAGPFLPTSASHNILLRGF 105
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 6/166 (3%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P+ TY LI F K + +++ M G PN +T N + L + A KL
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MQ P ++N++++GF +G A + + M + P+ + Y ++ L
Sbjct: 83 FREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSD 139
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
G A+ + P + T + L++G K Q +A ++M
Sbjct: 140 SGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLM 182
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 20/313 (6%)
Query: 66 LFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM-----R 120
LF H + ++ V L ++F ++ L++ ++L EG++ +
Sbjct: 151 LFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENL-----EGYVSLVTMKK 205
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M +AG + A++ F + G ++ +++LN + L + ++ + ME +
Sbjct: 206 VMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSI 265
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
H+ F SFNI++ +C+ LD A +M EM K G +P+V++YT I + K
Sbjct: 266 HVDFQ--SFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNV 323
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+++ M K C PN+ T+ + + L ++ +A ++ +M+ PD Y+ +I
Sbjct: 324 EAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFV 383
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC----QEGDFNLAYIMCKDSMKKN 356
+SG L A V+ M + + P+ Y TMI C +E L M +DS K
Sbjct: 384 LTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCK-- 441
Query: 357 WVPSVDTISALLE 369
P + T + LL+
Sbjct: 442 --PDIQTYAPLLK 452
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 38/218 (17%)
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKF 180
M GKA + A++ + M C ++ + VLT+S LK A F E +K
Sbjct: 346 MHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVF--EDMKKQ 403
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D+ ++N +I + C + A ++ M++ KPD+ TY L+
Sbjct: 404 GVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLK----------- 452
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
M C+ K+R L+ M + I D TY L++ G
Sbjct: 453 ------MCCR------------------KKRIKVLKFLLNHMFKNNISIDLGTYVLLVGG 488
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
C+SG L++A + M+ + L+P + Y+ ++ L Q
Sbjct: 489 LCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEELEQ 526
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
I D ++N+++ G+C++ LD A+K+ M + PN Y I C+ DF
Sbjct: 264 SIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNV 323
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + +K+ P+V T + + L K Q KA
Sbjct: 324 EAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKA 358
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I +FC G A ++ +M + + PDV+T++ LI+A K+ + ++
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G FP T+N I + R A +++ M PD VT++ +I G+C++
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D +++ M R ++ N Y T+IH CQ GD + A + + P+ T
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRVPH 393
++L L + KA I+ +Q+ H
Sbjct: 290 QSMLASLCSKKELRKAFAILEDLQKSEGH 318
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 145 GCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ V + + L E R L+A+ A + + E+ H + +I C+MG +
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQAL-ALVDRMVEEGH-----QPYGTIINGLCKMGDTE 58
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ +M++ +K V+ Y +I KD L+ M KG FP++ T++ I
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
R A +L+ M I PD VT++ +I + G + A+++Y ML R +
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
P Y +MI C++ N A M K+ P V T S L+ G K + I
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 384 MALVQRR 390
+ RR
Sbjct: 239 FCEMHRR 245
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + G +PDV+T+TTL++ + R L + MV +G P + I L
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+ A L+ M+ I+ V YN +I C+ GH A+ +++ M + + P+ Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
MI C+ G + A + +D +++ P V T SAL+ L K + +A I + RR
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG I+ A M GC+ + + N L ++ LK + + E+ IQ
Sbjct: 230 FCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS-GIQL 288
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMV-EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D +S+N ++K C + DK Y MV EM+ G DV++Y+TLI F + + L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRL 347
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M KG N+ T+ I+ + + S A KL+ M G+ PD + Y ++ C+
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
SG++D A V++ M+ + P+ Y ++I LC+ G A + +D K P T
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467
Query: 364 ISALLEGLKKNNQ 376
++ GL + +
Sbjct: 468 FKFIIGGLIRGKK 480
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 138/309 (44%), Gaps = 37/309 (11%)
Query: 109 LPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL 166
+ +GR + +++ G +AG + A++ + M G K+ A + L +R +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
+ E + ++ +N +I FC+ G ++KA + M K+G +PD++TY
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGC---------------------------------- 252
L++ +Y +N + G+ MV G
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 253 -FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
F ++ +++ I+ + +A +L M++ G+ + VTY +IK F R G+ +AK
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
K+ M L P+R Y T++ +LC+ G+ + AY + D ++ P + ++L+ GL
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 372 KKNNQPCKA 380
++ + +A
Sbjct: 441 CRSGRVTEA 449
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S++ +I+ FC KAY + EM++ G+ +V+TYT+LI AF ++ + L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P+ + + HL +A + M I PD ++YN +I G CRS
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A K++ M G+ P+ ++ +I L + + AY + M K + D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 365 SALLEG 370
L++
Sbjct: 504 DTLIKA 509
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 22/315 (6%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI------MMLYGKAGMIKHA 134
+ + +S L ++FD I+ LL ++L GFI I + L + + A
Sbjct: 80 FTYSRFISGLCKVKKFDLIDALLSDMETL------GFIPDIWAFNVYLDLLCRENKVGFA 133
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNIVI 193
+ TF+ M G + V S + L + + A++ + + + + D + ++
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI--RSGVSPDNKACAALV 191
Query: 194 KAFCEMGILDKAY-LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
C +D AY +V E++ VK + Y LIS F K R E L + M GC
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+L T+NV + + + +A +M M R GI+ D +YN ++K CR H D K
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD---K 308
Query: 313 VYSAMLGR---RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
Y+ M+ R + Y T+I C+ + AY + ++ +K V +V T ++L++
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 370 GLKKNNQPCKANTIM 384
+ A ++
Sbjct: 369 AFLREGNSSVAKKLL 383
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ +IKAF G A ++ +M +LG+ PD I YTT++ K + G++
Sbjct: 359 NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVF 418
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M+ P+ ++N I L R +A KL M+ PDE+T+ +I G R
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRG 478
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
L A KV+ M+ + +R + T+I C
Sbjct: 479 KKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 168 AIQAFLMEVPEKFHIQFDIFSF--NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
A+Q F E H + +FSF N I + A + +M+ +G TY+
Sbjct: 28 AVQVF----DEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYS 83
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
IS K + ++ + L + M G P++ FNV + L + + A + M +
Sbjct: 84 RFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQR 143
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G EPD V+Y ++I G R+G + A ++++AM+ + P+ K ++ LC +LA
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 346 YIMCKDSMKKNWVP-SVDTISALLEGLKKNNQPCKANTIMALVQR 389
Y M + +K V S +AL+ G K + KA + + + +
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV-PEKFHIQFD 185
K+GMI +A+ F +M + N + VL + +A ++ P F +
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI-- 78
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
F+++ I C++ D ++ +M+ LG PD+ + + ++N+ +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +G P++ ++ + I L + A ++ M R G+ PD ++ G C +
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 306 HLDMA-KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D+A + V + R+ + +Y +I C+ G A + K P + T
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 365 SALLEGLKKNNQPCKANTIMALVQR---RVPHFSSNQL 399
+ LL NN +A +MA + R ++ +S NQL
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
Length = 485
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K GM++ A++TF V + N L L+ + E+ + +Q
Sbjct: 49 YVKVGMVEKALETFRRNIETRLIPNVIACNCLLSGLSRFNYITQCWEVYAEMG-RLGVQR 107
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++FNI+ + G DK + +M++ G +PD++TY TL++++ K R E L+
Sbjct: 108 NAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLY 167
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M +G PNL T+ + L + + +A++L M GI PD V+YN ++ G+CR
Sbjct: 168 KIMYVRGVMPNLITYTTLMNGLCEEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRH 227
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + M + + M+G R+ P+ + ++ ++G
Sbjct: 228 GEMQMCRSILYEMIGNRICPDSITCRVIVDGYARDG 263
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/379 (18%), Positives = 151/379 (39%), Gaps = 43/379 (11%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQ--GRREGFI 118
EK + F+ N R+ I N A L+G RF+YI E + + +R +
Sbjct: 56 EKALETFRRNIETRL-IPNVIACN---CLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYT 111
Query: 119 MRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
IM + K G M G + + + N + + R L+ +L ++
Sbjct: 112 FNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLED-AFYLYKIM 170
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ ++ ++ ++ CE G + +A+ + +M G+ PD+++Y TL+ + +
Sbjct: 171 YVRGVMPNLITYTTLMNGLCEEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEM 230
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-PDEV---- 292
++ + M+ P+ T V + + A + ++RF ++ P+EV
Sbjct: 231 QMCRSILYEMIGNRICPDSITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYL 290
Query: 293 ------------------------------TYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
TYN +++ C + + A + S M + +
Sbjct: 291 VVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSM 350
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
N Y+ +I LC+ A ++ ++ + + +P V+ AL++G + N+ KA +
Sbjct: 351 KVNAAAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVS 410
Query: 383 IMALVQRRVPHFSSNQLSA 401
++ L + + + +A
Sbjct: 411 LLKLFAKEFQVYDTESYNA 429
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 101/242 (41%), Gaps = 1/242 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G +K A F+ M G + S N + +++ ++ L E+ I D
Sbjct: 191 EEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGN-RICPDS 249
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +++ + G L A + E+++ +K Y L+ A K+ +P +
Sbjct: 250 ITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHR 309
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ G P + T+N ++ L +A L M+ ++ + Y VI CR
Sbjct: 310 ISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKR 369
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A+ + ++G ++P+ +I + +I C+E + A + K K+ V ++ +A
Sbjct: 370 TVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNA 429
Query: 367 LL 368
++
Sbjct: 430 VV 431
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 8/228 (3%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C+ V K+L+ ++ ++ F M++PE+ ++ ++ A C+ G A
Sbjct: 252 CRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEV--------YDYLVVALCKEGKPFAA 303
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ + + G P + TY L+ + + N E L + M K N A + I
Sbjct: 304 RSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIIC 363
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L +R+ +A L+ + + PD +IKG+C +D A + + +
Sbjct: 364 LCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYD 423
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ Y ++ C G+ + +K +VP+ T ++ GL+K
Sbjct: 424 TESYNAVVKVFCDVGNVTELMEVEDKLLKVGYVPNKLTCRHVIHGLQK 471
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + G + A++T ++ + K + + + L + A ++FL + E +
Sbjct: 259 YARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTP- 317
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N ++++ CE ++A ++ +M+ +K + Y +I + R L
Sbjct: 318 KMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLL 377
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ P++ I+ + + +A L+ L + D +YN V+K FC
Sbjct: 378 EEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNAVVKVFCDV 437
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
G++ +V +L +PN+ + +IH L
Sbjct: 438 GNVTELMEVEDKLLKVGYVPNKLTCRHVIHGL 469
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 46/328 (14%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL-ME 175
I ++ L GKAG + A+ F +M C V + N +K L ES+ +A +AFL E
Sbjct: 337 LINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESK-ARASEAFLWYE 395
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
++ + F+++I+I FC+ ++KA L++ EM + G P Y +LI+A K
Sbjct: 396 KMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAK 455
Query: 236 RPEIGN-----------------------------------GLWNLMVCKGCFPNLATFN 260
R E N L+N M GC P++ +N
Sbjct: 456 RYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYN 515
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ +V + +A+ L+ M+ G PD ++N+++ GF R+G A ++++ M
Sbjct: 516 ALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNS 575
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK--NNQPC 378
++ P+ Y T++ L + G F A + K+ K + + T S++LE + K +
Sbjct: 576 KIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTP 635
Query: 379 KANTIMALVQ-------RRVPHFSSNQL 399
T+M +V RR H SS L
Sbjct: 636 AGQTVMHIVNIKIINLVRREGHVSSEYL 663
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 170/387 (43%), Gaps = 32/387 (8%)
Query: 25 NNIRAVSLN-KFPNREPLVDKPLEPPALVKLKAER---DPEKLFQLFKANAHNRIVIE-- 78
+ I+ + +N KFP P V + L+ + LK + D EK ++ K +R+V E
Sbjct: 40 DEIQRLPMNQKFPRNNPSV-RTLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVL 98
Query: 79 -----------------NKYAFE-DTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIM- 119
+ FE D+ + +A D L E K++ + R ++
Sbjct: 99 KIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIG 158
Query: 120 -----RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM 174
I+ + GKA M+ A+ FY + CK T + N+ + +L + + +
Sbjct: 159 PADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYN 218
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ + D +++ +I AF ++G D A + EM++ G+ P YTT++ ++K
Sbjct: 219 EMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKL 278
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
R E GL M KGC + T+ I+ + + +A + M + G +PD V
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLI 338
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N +I ++G L A K++ M + PN Y T+I L + + + MK
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMK 398
Query: 355 KNW-VPSVDTISALLEGLKKNNQPCKA 380
+N VPS T S L++G K N+ KA
Sbjct: 399 ENGVVPSSFTYSILIDGFCKTNRVEKA 425
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 39/313 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+GK G A+ F +M G T K L + + ++ + E+ EK
Sbjct: 240 FGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK-GCAL 298
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++ +IK + G +++AY + + M K G KPDV+ LI+ K R L+
Sbjct: 299 TVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLF 358
Query: 245 NLMVCKGCFPNLATFNVRIQHLV-NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M C PN+ T+N I+ L +K R+ +A M+ G+ P TY+++I GFC+
Sbjct: 359 EEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCK 418
Query: 304 SGHLDMAKKVYSAMLGRRLMP-----------------------------------NRKI 328
+ ++ A + M + P + ++
Sbjct: 419 TNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARV 478
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI +L + G + A + + K P V +AL+ G+ + +A++++ ++
Sbjct: 479 YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTME 538
Query: 389 RR--VPHFSSNQL 399
P +S+ +
Sbjct: 539 ENGCTPDLNSHNI 551
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMA 310
C P T+N I L+ + + ++L M G PD VTY+ +I F + G D A
Sbjct: 190 CKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSA 249
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M L P KIY T++ + G A + ++ +K +V T + L++G
Sbjct: 250 ISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKG 309
Query: 371 LKKNNQPCKANTI 383
+ K + +A +I
Sbjct: 310 VGKAGKVEEAYSI 322
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 112/197 (56%), Gaps = 2/197 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N+++ C+ +L++A +M +M++ GV+PDV +Y L+ K NR + +
Sbjct: 253 DLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMM 312
Query: 245 -NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N M KG ++ ++N I+ L + +A KL M GI PD VT+ ++IK F R
Sbjct: 313 VNKMEAKG-LCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLR 371
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G ++AKK+ M G L+P+R +Y T++ +LC+ G +A+ + D ++ P V +
Sbjct: 372 EGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVS 431
Query: 364 ISALLEGLKKNNQPCKA 380
+AL+ GL + ++ +A
Sbjct: 432 YNALINGLCRASRVSEA 448
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 134/302 (44%), Gaps = 21/302 (6%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
A+E TV + G +F KS+ GF +AG I A M
Sbjct: 203 AYELTVGAMRGRIKF---------SKSIYNSLINGFC--------QAGWIDKAQSIISFM 245
Query: 142 HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGI 201
GC+ + + N L + L LM+ E+ ++ D++S+N ++K C+
Sbjct: 246 RRNGCEPDLVTYNVLLNYCCDEL-LLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR 304
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LDKAY++MV + DV++Y T+I A + + L+ M KG P++ TF +
Sbjct: 305 LDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTI 364
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I+ + + S A KL+ M G+ PD V Y ++ C++G + MA V+ M+
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESG 424
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL---KKNNQPC 378
+ P+ Y +I+ LC+ + A + +D P T ++ GL KK + C
Sbjct: 425 ITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVAC 484
Query: 379 KA 380
+
Sbjct: 485 RV 486
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPE-KFHIQFDIFSFNIVIKAFCEM 199
M G + V S N LK L ++ L +A++M V + + D+ S+N +IKA C
Sbjct: 280 MERSGVEPDVYSYNELLKGLCKANRLD--KAYMMMVNKMEAKGLCDVVSYNTIIKALCTA 337
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+AY + EM G+ PDV+T+T LI AF ++ I L + M G P+ +
Sbjct: 338 SHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLY 397
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
+ HL + A+ + M GI PD V+YN +I G CR+ + A +Y M
Sbjct: 398 TTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHT 457
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPC 378
P+ ++ +I L E ++A + M+K + L+ + N+ C
Sbjct: 458 GGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSNDASC 516
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQ 183
Y KAG+I A+ TF +M C+ N + VL +SR A Q + +P+ F +
Sbjct: 19 YVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSL- 77
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ F+++ I C++ ++ +M +LG PD+ Y ++ +N+ ++ G+
Sbjct: 78 -NSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGV 136
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
MV KG P++ T+ + I L R A ++ M R G PDE ++ G C
Sbjct: 137 VQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCH 196
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +D+A ++ + R+ ++ IY ++I+ CQ G
Sbjct: 197 DGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAG 233
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%)
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ C G +D AY + V + +K Y +LI+ F + + + + M G
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
C P+L T+NV + + ++ +A LM M+R G+EPD +YN ++KG C++ LD A
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAY 309
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ + + + + Y T+I LC AY + ++ K P V T + L++
Sbjct: 310 MMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAF 369
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%)
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I ++ + G++D+A EM K + I Y I + +R ++ ++ M+ +G
Sbjct: 16 ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
N T++ I L + KL+ M R G PD YN+ + C LD+A
Sbjct: 76 SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
V M+ + P+ Y +I+ LC+ G F+ A + ++ ++K + P AL+ GL
Sbjct: 136 VVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + GMI AM+ +M GC V + N L L + + L E+ E+
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP- 478
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ I+I C++G L A + +M++ ++ DV+TY TL+ F K + +W
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV K P ++++ + L +K +A ++ M I+P + N +IKG+CRS
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK--DSMKKNWVPSVD 362
G+ + M+ +P+ Y T+I+ +E + + A+ + K + + VP V
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 363 TISALLEGLKKNNQPCKANTIM-ALVQRRV 391
T +++L G + NQ +A ++ +++R V
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +A ++ A + F + G ++ + NA + L ++ E+ + +
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-SRSGVGI 233
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++ NI++ A C+ G ++K + ++Q+ GV PD++TY TLISA+ E L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M KG P + T+N I L + +A ++ M R G+ PD TY ++ C+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +KV+S M R ++P+ + +M+ + G+ + A + + +P
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 365 SALLEG 370
+ L++G
Sbjct: 414 TILIQG 419
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRI---MMLYG---KAGMIKHAMDTFYDMHLYGCK 147
R + L E ++ R +GF + I L G + G ++ A + ++ G
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
V +LN + L + ++ + FL +V EK + DI ++N +I A+ G++++A+
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
+M M G P V TY T+I+ K + E ++ M+ G P+ T+ +
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
K + K+ M+ + PD V ++ ++ F RSG+LD A ++++ L+P+
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
IY +I C++G ++A + + +++ V T + +L GL K +A+ + +
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 388 QRR 390
R
Sbjct: 472 TER 474
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++M K G + F DM + ++ + + T S +L + V E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I ++ + I+I+ +C G++ A + EM + G DV+TY T++ K
Sbjct: 406 LIPDNVI-YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ L+N M + FP+ T + I A +L M+ I D VTYN ++ G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + G +D AK++++ M+ + ++P Y +++ LC +G A+ + + + KN P+
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 361 VDTISALLEGLKKNNQPCKANTIM 384
V +++++G ++ + +
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFL 608
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 9/238 (3%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +++AM+ F M + V + N L + D+ + ++ K + I
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S++I++ A C G L +A+ V EM +KP V+ ++I + + G
Sbjct: 552 -SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF-----GIEPDEVTYNLVIKGF 301
M+ +G P+ ++N I V R +K GL+++ G+ PD TYN ++ GF
Sbjct: 611 MISEGFVPDCISYNTLIYGFV---REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
CR + A+ V M+ R + P+R Y MI+ + + A+ + + +++ + P
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 3/205 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+GK G I A + + DM T S + + L L E+ K +I+
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKP 583
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ N +IK +C G + +M G PD I+Y TLI F ++ GL
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 245 NLMVCK--GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M + G P++ T+N + + + +A ++ M G+ PD TY +I GF
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRK 327
+L A +++ ML R P+ K
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 1/261 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G+++ A + M G V + N + L + + + E+ + +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML-RSGLSP 338
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ ++ C+ G + + V +M+ V PD++ +++++S F + + +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + G P+ + + IQ K A L M + G D VTYN ++ G C+
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
L A K+++ M R L P+ +I C+ G+ A + + +K V T
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 365 SALLEGLKKNNQPCKANTIMA 385
+ LL+G K A I A
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWA 539
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 71/168 (42%), Gaps = 4/168 (2%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ--ANKLMGL 281
+ LI + + + + + L+ KG ++ N I LV R W A +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLV--RIGWVELAWGVYQE 225
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ R G+ + T N+++ C+ G ++ S + + + P+ Y T+I +G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
A+ + K + P V T + ++ GL K+ + +A + A + R
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ + + A +M L G + NA L V +SR K L E+ E I
Sbjct: 283 RGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEM-EGNGCPPSI 341
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I A+ G+L+ A + +M + G+KPDV TYTTL+S F K + + ++
Sbjct: 342 VTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEE 401
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +GC PN+ TFN I+ N+ + + K+ ++ F PD VT+N ++ F ++G
Sbjct: 402 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 461
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
V+ M +P R + T+I + G F+ A + K ++ P + + +A
Sbjct: 462 DSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNA 521
Query: 367 LLEGLKKNNQPCKANTIMA 385
+L L + ++ ++A
Sbjct: 522 VLAALARGGLWKQSEKVLA 540
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 4/255 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLME 175
I I+ + GK G + A +++ G V + + + T + R +A+ F +
Sbjct: 167 IIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVF--K 224
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGI-LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E+ + + ++N+++ + +MG+ +K ++ M+ G+ PD TY TLIS +
Sbjct: 225 KMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRG 284
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
N E G+ M G P+ T+N + RRS +A +++ M+ G P VTY
Sbjct: 285 NLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTY 344
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
N +I + R G L+ A ++ + M+ + + P+ Y T++ + G A + ++
Sbjct: 345 NSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRN 404
Query: 355 KNWVPSVDTISALLE 369
+ P++ T +AL++
Sbjct: 405 EGCKPNICTFNALIK 419
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A+ F M GCK T+ + N L V + L++ + I D ++
Sbjct: 214 GRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYT 273
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N +I + ++A V+ EM+ G PD +TY L+ + K R + + M
Sbjct: 274 YNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEME 333
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
GC P++ T+N I A +L M GI+PD TY ++ GF ++G
Sbjct: 334 GNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDK 393
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +++ M PN + +I G F + +D P + T + LL
Sbjct: 394 AAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL 453
Query: 369 EGLKKNNQPCKANTIMALVQR 389
+N + + + ++R
Sbjct: 454 SVFGQNGMDSEVSGVFKEMKR 474
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 130/270 (48%), Gaps = 11/270 (4%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG K A+ F +M GCK + + NA +K+ + ++ + F
Sbjct: 386 FEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI-KTFQCSP 444
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N ++ F + G+ + V EM++ G P+ T+ TLIS++ + + ++
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P+L+++N + L Q+ K++ M+ +P+E+TY ++ +
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 564
Query: 305 GHLD----MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ-EGDFNLAYIMCKDSMKKNWVP 359
++ +A+++YS ++ R + + + +++ C + A++ + ++ + P
Sbjct: 565 KEIERMCALAEEIYSGIIEPRAVLLKTL--VLVNSKCDLLMETERAFLELR---QRGFSP 619
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ T++A++ + KAN I+ ++R
Sbjct: 620 DITTLNAMVSIYGRRQMVAKANEILDCMKR 649
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 36/255 (14%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ ++G+ GM F +M G + N + + A + E
Sbjct: 452 LLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEA- 510
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR---- 236
+ D+ S+N V+ A G+ ++ V+ EM+ KP+ +TY +L+ A+
Sbjct: 511 GVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERM 570
Query: 237 ----PEIGNGLWN------------------LMVCKGCF---------PNLATFNVRIQH 265
EI +G+ LM + F P++ T N +
Sbjct: 571 CALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSI 630
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
++ +AN+++ M+R G P TYN ++ + RS + + ++++ +L + + P+
Sbjct: 631 YGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPD 690
Query: 326 RKIYQTMIHYLCQEG 340
Y T+I+ C+ G
Sbjct: 691 IISYNTVIYAYCRNG 705
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 191 IVIKAFCEMGI-LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+++ + C++ + ++A+L E+++ G PD+ T ++S + + N + + M
Sbjct: 593 VLVNSKCDLLMETERAFL---ELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR 649
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P+L T+N + ++ +++ + GI PD ++YN VI +CR+G +
Sbjct: 650 GGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRD 709
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +V S M P+ Y T I + F A + +K P+ T +++++
Sbjct: 710 ASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVD 769
Query: 370 GLKKNNQPCKANTIMALVQRRVPHFSSNQ 398
K N+ +A+ + +++ PH S ++
Sbjct: 770 WYCKLNRRDEASMFVNNLRKLDPHISMDE 798
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI + N ++ + ++ KA ++ M++ G P + TY +L+ + + E +
Sbjct: 620 DITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEIL 679
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG P++ ++N I R A++++ M+ G PD +TYN I +
Sbjct: 680 REILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAAD 739
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
A V M+ PN+ Y +++ + C+
Sbjct: 740 SMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
R + ++++ K ++ F ++ G + +LNA + + R + A +
Sbjct: 585 RAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGR-RQMVAKANEI 643
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
++ ++ + ++N ++ + +++ ++ E+ G++PD+I+Y T+I A+ +
Sbjct: 644 LDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCR 703
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ R + + + M G P++ T+N I +A ++ M + G +P++ T
Sbjct: 704 NGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQST 763
Query: 294 YNLVIKGFCRSGHLDMA 310
YN ++ +C+ D A
Sbjct: 764 YNSIVDWYCKLNRRDEA 780
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ + + A F +M G + NA L V +S K L E+ E I
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEM-ELNGFSPSI 349
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I A+ G+LD+A + +M + G KPDV TYTTL+S F + + E ++
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEE 409
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC PN+ TFN I+ N+ + K+ + G+ PD VT+N ++ F ++G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
V+ M +P R+ + T+I + G F A + + + P + T +
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 367 LLEGLKKNNQPCKANTIMALVQ 388
+L L + ++ ++A ++
Sbjct: 530 VLAALARGGMWEQSEKVLAEME 551
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 2/223 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + +G + A++ F M GCK T+ + N L V + L+E +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 181 HIQFDIFSFNIVIKAFCEMGIL-DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
I D +++N +I C+ G L +A V EM+ G D +TY L+ + K +RP+
Sbjct: 274 GIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKE 332
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ N M G P++ T+N I +A +L M G +PD TY ++
Sbjct: 333 AMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
GF R+G ++ A ++ M PN + I G F
Sbjct: 393 GFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 130/274 (47%), Gaps = 17/274 (6%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG ++ AM+ F +M GCK + + NA +K+ + E+ +
Sbjct: 394 FERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEI-NVCGLSP 452
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N ++ F + G+ + V EM++ G P+ T+ TLISA+ + E ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P+L+T+N + L Q+ K++ M+ +P+E+TY ++ +
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 305 GHL----DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF----NLAYIMCKDSMKKN 356
+ +A++VYS + + P + +T++ +C + D A+ K+ +
Sbjct: 573 KEIGLMHSLAEEVYSGV----IEPRAVLLKTLV-LVCSKCDLLPEAERAFSELKE---RG 624
Query: 357 WVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P + T+++++ + KAN ++ ++ R
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 8/276 (2%)
Query: 96 FDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
FD+ ++Q L I ++ + GK G + A + F + G V S +
Sbjct: 158 FDWFMKQKDYQSMLDNS----VIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTS 213
Query: 156 ALKVLTES-RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVE-MQ 213
+ S R +A+ F + E+ + + ++N+++ F +MG +VE M+
Sbjct: 214 LISAFANSGRYREAVNVF--KKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSW 273
G+ PD TY TLI+ + + + ++ M G + T+N + R
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPK 331
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
+A K++ M+ G P VTYN +I + R G LD A ++ + M + P+ Y T++
Sbjct: 332 EAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 334 HYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+ G A + ++ P++ T +A ++
Sbjct: 392 SGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIK 427
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 121/273 (44%), Gaps = 1/273 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ + GM + + +M CK + + L +++ + + EV
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ ++ + +L +A E+++ G PD+ T +++S + +
Sbjct: 590 -IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKA 648
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
N + + M +G P++AT+N + ++ +++ + GI+PD ++YN VI
Sbjct: 649 NEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+CR+ + A +++S M ++P+ Y T I + F A + + +K P+
Sbjct: 709 YCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
+T +++++G K N+ +A + ++ PH
Sbjct: 769 QNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 91/198 (45%), Gaps = 1/198 (0%)
Query: 114 REGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
R + ++++ K ++ A F ++ G + +LN+ + + + + L
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVL 652
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ E+ + ++N ++ K+ ++ E+ G+KPD+I+Y T+I A+ +
Sbjct: 653 DYMKERGFTP-SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ R + +++ M G P++ T+N I +A ++ M + G P++ T
Sbjct: 712 NTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771
Query: 294 YNLVIKGFCRSGHLDMAK 311
YN ++ G+C+ D AK
Sbjct: 772 YNSIVDGYCKLNRKDEAK 789
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ LY K G + A++ +M G K +K+ + + + +D A ++ K
Sbjct: 492 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI-KD 550
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ D+ +N +I AFC MG +D+A + EMQK KP T+ +I F + +
Sbjct: 551 GIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKA 610
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++++M GC P + T+N I LV KR+ +A +++ M G+ P+E TY ++ G
Sbjct: 611 LDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHG 670
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
+ G A ++ + L + Y+ ++ C+ G A + K+ +N +
Sbjct: 671 YASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRN 730
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILSKS 409
+ L++G + +A +M ++R + ++F + SK+
Sbjct: 731 TFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKA 779
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 4/232 (1%)
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
++ Q+ P R M I+ + + G +K A+D F M + GC TV + NA + L E
Sbjct: 582 MQKQRHKPTTRT---FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVE 638
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
R ++ + L E+ + + ++ ++ + +G KA+ +++ G++ DV
Sbjct: 639 KRKMEKAEQILDEMTLA-GVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVY 697
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
TY L+ A K R + + M + N +N+ I + W+A LM M
Sbjct: 698 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQM 757
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+R G++PD TY I ++G + A K M + PN K Y T+I+
Sbjct: 758 KREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIN 809
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+ M G + ++ + + + ++ + ++ + E EK H + +
Sbjct: 362 MEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK-HSSLNAIIYG 420
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I A+C+ +DKA ++ EM++ G+ + Y T++ + +G+ L+V +
Sbjct: 421 NIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM-----VGDEDKCLLVFE 475
Query: 251 -----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
G P++ T+ I + +A ++ M+ GI+ + TY+++I GF +
Sbjct: 476 RFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLK 535
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ ++ + P+ +Y +I C G + A K+ K+ P+ T
Sbjct: 536 DWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFM 595
Query: 366 ALLEGLKKNNQPCKA 380
++ G + + KA
Sbjct: 596 PIIHGFARKGEMKKA 610
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A LM+ ++ +Q DI ++ I A + G + +A + EM+ +GVKP+V TYTTLI+
Sbjct: 751 ADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLING 810
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+ + + PE + M G P+ A ++ + L+++
Sbjct: 811 WARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSR 849
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +++ + G + +A +M+ G++P YT LI A+ +G + +
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAY------AVGRDMEEALS 367
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
C V K M+ GIE VTY++++ GF ++G+ +
Sbjct: 368 C-----------------VRK------------MKEEGIEMSLVTYSILVSGFAKTGNAE 398
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A + + N IY +I+ CQ + + A + ++ ++ +D ++
Sbjct: 399 SADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMM 458
Query: 369 EG 370
+G
Sbjct: 459 DG 460
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+WQA ++ +R +P Y L++ + R G + A++ + M R + P+ +Y
Sbjct: 295 NWQA--VVSAFERIK-KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTN 351
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVDTISALLEGLKKNNQPCKAN 381
+IH D A + C MK+ + S+ T S L+ G K A+
Sbjct: 352 LIHAYAVGRDMEEA-LSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESAD 401
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ + GKA A++ F TV+ NA + V +Q L + E+
Sbjct: 226 ILSVLGKANQEALAVEVFMRAE-PSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRER- 283
Query: 181 HIQFDIFSFNIVIKAFCEMGIL--DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
+ D+ SFN +I A + G + + A ++ E+++ G++PD ITY TLISA + + E
Sbjct: 284 GCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLE 343
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
+++ M C P+L T+N I S +A +L ++ G PD V+YN ++
Sbjct: 344 EAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLL 403
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F R G+++ K+++ M+ + Y TMIH ++G LA + +D
Sbjct: 404 YAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRN 463
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMA 385
P T + L++ L K N+ +A +M+
Sbjct: 464 PDAVTYTVLIDSLGKTNKIAEAAGVMS 490
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E H Q D++++N +I + G+ KA + +++ G PD ++Y +L+ AF ++
Sbjct: 353 EAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNV 412
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E +W MV G + T+N I + ++ A +L MQ G PD VTY ++
Sbjct: 413 EKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVL 472
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMI 333
I ++ + A V S ML + P K Y +I
Sbjct: 473 IDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALI 508
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +YG+ G+ A F D+ G S N+ L +++ ++ E+ K
Sbjct: 367 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMV-KI 425
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
D ++N +I + + G + A + +MQ G PD +TYT LI + K N+
Sbjct: 426 GFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEA 485
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
G+ + M+ G P L T++ I + +A + M R GI PD + Y++++
Sbjct: 486 AGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDI 545
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
R A +Y ML + + +Y+ M+ L
Sbjct: 546 HLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTL 581
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
I+ ++ + +AG I ++ M G T+ ++L+ + ++ ++A L E+
Sbjct: 886 ILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEM- 944
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E+ + D+ +N V+K + + K V +++ G++PD TY TLI + +D+RP
Sbjct: 945 EEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRP 1004
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E G L + M G P L T+ + ++ QA +L +Q G + D Y+ +
Sbjct: 1005 EEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTM 1064
Query: 298 IKGFCRSGHLDMAKKVYSAM 317
+K + SG A++++S M
Sbjct: 1065 MKIYRNSGSHSKAERLFSMM 1084
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 118 IMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
+ R+M L + ++ +M G K + N+ LK+ D + +
Sbjct: 920 LYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRI 979
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
E ++ D ++N +I +C ++ + +M EM+ G++P + TY +L+++F K
Sbjct: 980 KED-GLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQL 1038
Query: 237 PEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
E L+ + KGC + + ++ ++ N +A +L +M+ G+EP T +L
Sbjct: 1039 VEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHL 1098
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++ + SG A+KV S + + Y ++I + GD+N+
Sbjct: 1099 LMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIG 1147
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
+I A F DM G K + +SL ++ +L L++ E I + S
Sbjct: 722 LITEASQVFSDMRFCGIKAS-ESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISL 780
Query: 190 NI-VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ VI+A+ + + KA V +++ + D + LI A+ E ++N M+
Sbjct: 781 YVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMM 840
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G P + T N +Q L+ R + ++ +Q G + + + L++ F R+G++
Sbjct: 841 RDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIF 900
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
KK+Y M P +Y+ M L +
Sbjct: 901 EVKKIYHGMKAAGYFPTMHLYRVMARLLSR 930
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 86/205 (41%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N +++A G LD+ Y+V+ E+Q +G K + ++ AF + +++
Sbjct: 848 VDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYH 907
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G FP + + V + L ++ ++ M+ G +PD +N V+K +
Sbjct: 908 GMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIE 967
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+VY + L P+ Y T+I C++ + + + P +DT
Sbjct: 968 DFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYK 1027
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
+L+ K +A + +Q +
Sbjct: 1028 SLVASFGKQQLVEQAEELFEELQSK 1052
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 52/227 (22%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
CK + L+AALK + +R+L +F M F +I+ E ++ +A
Sbjct: 683 CK--AQQLDAALKEYSNNRELGFTGSFTM--------------FESLIQCCLENELITEA 726
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
V +M+ G+K Y +++ + K PE + L + G N + V +
Sbjct: 727 SQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIE 786
Query: 266 LVNKRRSWQ-ANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + WQ A + G +++ I D +N +I+ + SG + A
Sbjct: 787 AYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERA-------------- 832
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
R I+ TM M+ P+VDTI+ LL+ L
Sbjct: 833 -RAIFNTM--------------------MRDGPSPTVDTINGLLQAL 858
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 88/229 (38%), Gaps = 42/229 (18%)
Query: 77 IENKYAFEDTVS------RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGM 130
+E++ F D VS A + ++ + E + G+ E ++ +YGK G
Sbjct: 387 LESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQ 446
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+ + DM G R+ A+ ++
Sbjct: 447 NELALQLYRDMQSSG------------------RNPDAV------------------TYT 470
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++I + + + +A VM EM GVKP + TY+ LI + K +P ++ M+
Sbjct: 471 VLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRS 530
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
G P+ ++V + + +A L M GI D Y L+++
Sbjct: 531 GIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLR 579
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ +M G V + N L L S L ++ ++ I D+
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDV 246
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F +I F + G LD+A + EM + V P+ +TY ++I+ R ++L
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGCFPN+ T+N I R + KL M G D TYN +I G+C+ G
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L +A ++ M+ RR+ P+ + ++H LC G+ A + D + + +
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 367 LLEGLKKNNQPCKA 380
++ GL K ++ KA
Sbjct: 427 MIHGLCKADKVEKA 440
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 2/216 (0%)
Query: 158 KVLTESRDLKAIQA--FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
++LT + +L+ + + + E + I D++SF I+I FC L A V+ +M KL
Sbjct: 76 RLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL 135
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G +P ++T+ +L+ F NR L LMV G PN+ +N I L A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
+L+ M++ G+ D VTYN ++ G C SG A ++ M+ R + P+ + +I
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
++G+ + A + K+ ++ + P+ T ++++ GL
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 1/233 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M LYG + S + L + L ++ K + I +F ++ FC +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM-KLGYEPSIVTFGSLLHGFCLVN 155
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A+ +++ M K G +P+V+ Y TLI K+ I L N M KG ++ T+N
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L R A +++ M + I PD VT+ +I F + G+LD A+++Y M+
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ PN Y ++I+ LC G A K P+V T + L+ G K
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 94/231 (40%), Gaps = 41/231 (17%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFH--IQFDI----FSFNIVIKAFCEMGILDK 204
+S+N + T D+ Q L E E + IQ + ++N +I C G L
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A M G P+V+TY TLIS F K + G L+ M C+G ++ T+N I
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 265 HL--VNKRR------SWQANK------------LMGLMQRFGIEP-----DE-------- 291
V K R W ++ L GL IE D+
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 292 --VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
V YN++I G C++ ++ A +++ + + P+ + Y MI LC+ G
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L + F R E L+ MV P++ F + N RR M+ +G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC---QEGD-F 342
I D ++ ++I FCR L A V M+ P+ + +++H C + GD F
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+L +M +K + P+V + L++GL KN +
Sbjct: 162 SLVILM----VKSGYEPNVVVYNTLIDGLCKNGE 191
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ I+I+A G +++A ++ EM G+ PD+ TY +I K+ E L
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 266
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ KGC P++ ++N+ ++ +N+ + + KL+ M G EP++VTY+++I CR G
Sbjct: 267 SLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 326
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A V M+ + L P+ Y +I LC+EG +LA + + +P + +
Sbjct: 327 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 386
Query: 366 ALLEGLKKNNQPCKA 380
+L L KN +A
Sbjct: 387 TILAALCKNGNANQA 401
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K GM++ A + + GCK V S N L+ + + E+ + + +
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPNK 312
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++I+I + C G +D+A V+ M + + PD +Y LISA K+ R ++ G+ +
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC P++ +N + L + QA ++ ++ G P+ +YN +I G
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A + AM+ + + P+ Y ++I LC++G A + D + + P+V + +
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492
Query: 367 LLEGLKK 373
+L GL K
Sbjct: 493 VLLGLCK 499
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 96/187 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N +I+ C+ G++++A ++ + G KPDVI+Y L+ AF + + G L
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M +GC PN T+++ I L R +A ++ +M + PD +Y+ +I C+
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G LD+A + M+ +P+ Y T++ LC+ G+ N A + P+V +
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 365 SALLEGL 371
+ ++ L
Sbjct: 421 NTMISAL 427
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ E H + D+F++N VI FC++ ++ A V+ M+ G PD++TY +I +
Sbjct: 125 VMEILES-HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 183
Query: 233 KDNRPEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
NR ++G L L ++ C P + T+ + I+ + + +A KL+ M G+ PD
Sbjct: 184 --NRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 241
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
TYN +I+G C+ G ++ A ++ +++ + P+ Y ++ +G ++ +
Sbjct: 242 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301
Query: 351 DSMKKNWVPSVDTISALLEGL 371
+ + P+ T S L+ L
Sbjct: 302 EMFSRGCEPNKVTYSILISSL 322
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N ++ A C+ G ++A + +++ +G P+V +Y T+ISA + G+
Sbjct: 381 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 440
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P+ T+N I L +A L+ M++ G P ++YN+V+ G C+
Sbjct: 441 PAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 500
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
+D A +++ M+ + PN Y +I
Sbjct: 501 RRIDDAIGMFAEMIEKGCRPNETTYILLIE 530
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ G +++ + + G PDVI T LI F+ E + + ++ P++
Sbjct: 79 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDV 137
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+N I R A +++ M+ G PD VTYN++I C L +A KV
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+L MP Y +I EG N A + ++ + + +P + T +A++ G+ K
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ S+N +I A G +A ++ M GV PD ITY +LIS +D E GL
Sbjct: 416 NVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P + ++N+ + L RR A + M G P+E TY L+I+G +
Sbjct: 476 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFA 535
Query: 305 GHLDMAKKVYSAMLGRRLM 323
G A ++ +++ R ++
Sbjct: 536 GWRTEAMELANSLFSRDVI 554
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 105/188 (55%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I A C+ ++ +AY + EM G+ DV+TY+TLI F + + + GL N MV
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
K PN+ T+N+ + L + + +A ++ +M + ++PD +TY+ ++ G+ +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ V++AM + P+ Y +I+ C+ + A + K+ +KN VP + T S+L+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 369 EGLKKNNQ 376
+GL K+ +
Sbjct: 382 DGLCKSGR 389
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K ++ A F +M + G V + + + LK L E+ K I ++
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK-TINPNV 269
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++NI++ A C+ G + +A V+ M K VKPDVITY+TL+ ++ + ++N
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G P++ T+ + I + +A L M + + P VTY+ +I G C+SG
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ + M R + Y ++I LC+ G + A + + P++ T +
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 367 LLEGLKKNNQ 376
LL+GL K +
Sbjct: 450 LLDGLCKGGR 459
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 3/250 (1%)
Query: 123 MLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++YG G +K A+ +M L V + N + L + +K ++ L V K
Sbjct: 240 LIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKA 298
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ D+ +++ ++ + + + KA V M +GV PDV TYT LI+ F K+ +
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L+ M K P + T++ I L R L+ M+ G D +TY+ +I G
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDG 418
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++GHLD A +++ M + + PN + ++ LC+ G A + +D + K + +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN 478
Query: 361 VDTISALLEG 370
V T + ++ G
Sbjct: 479 VYTYNVMING 488
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 35/224 (15%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF---------- 231
IQ D+ + NI+I FC MG + + V+ ++ K G PD +T TLI
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149
Query: 232 -YKDNRPEIG------------NGLWNLMVCKGCF------------PNLATFNVRIQHL 266
+ D G NG+ + +G PN+ ++ I L
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+ +A L M GI D VTY+ +I GFC G L A + + M+ + + PN
Sbjct: 210 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNV 269
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y ++ LC+EG A + +K P V T S L++G
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I+I FC+ ++D+A + EM + + P ++TY++LI K R L
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G ++ T++ I L +A L M+ I P+ T+ +++ G C+
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A++V+ +L + N Y MI+ C++G A M +P+ T
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 517
Query: 365 SALLEGLKKNNQPCKANTIM 384
++ L K ++ KA ++
Sbjct: 518 ETIIIALFKKDENDKAEKLL 537
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I FN ++ +F +M A + ++ G++PD+IT LI+ F + G +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
++ +G P+ T N I+ L K + +A + G + ++V+Y +I G C+ G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A K+ + GR PN ++Y T+I LC+ + AY + + K V T S
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 238
Query: 366 ALLEGL 371
L+ G
Sbjct: 239 TLIYGF 244
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+K A F M L G V + + +++ + E+ +K + I +++
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYS 378
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I C+ G + + ++ EM+ G DVITY++LI K+ + L+N M +
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
PN+ TF + + L R A ++ + G + TYN++I G C+ G L+ A
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498
Query: 311 KKVYSAMLGRRLMPNRKIYQTMI 333
+ S M +PN ++T+I
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETII 521
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K M+ A++ F +MH + + ++ + L +S + + + E+ ++
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQ-PA 407
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ +I C+ G LD+A + +M+ ++P++ T+T L+ K R + ++
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG N+ T+NV I + +A ++ M+ G P+ T+ +I +
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Query: 305 GHLDMAKKVYSAMLGRRLM 323
D A+K+ M+ R L+
Sbjct: 528 DENDKAEKLLRQMIARGLL 546
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +I + ++ +F K L + + KG P+L T N+ I + + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ + + G PD VT N +IKG C G + A + +L + N+ Y T+I+ +C+
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
GD A + + + P+V+ S +++ L K
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 211
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+N M+C P + FN + + A L ++ GI+PD +T N++I FC
Sbjct: 47 FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + V + +L R P+ T+I LC +G
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F F ++ + G ++AY V+ EM G PDVI YT+LI + R +++
Sbjct: 538 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 597
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ KGC P+ T+ IQ+ A +++ LM + G+ PD YN ++ G+ +
Sbjct: 598 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 657
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTI 364
+D A VY M+ + PN + ++H L ++G + A+ + K+ ++K+ V P++ +
Sbjct: 658 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSY 717
Query: 365 SALLEGLKKNNQPCKA 380
+ L++GL K + +A
Sbjct: 718 TILIDGLGKAGRVSEA 733
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 7/244 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +A + A++ F + YGCK + ++ L +++ ++ +AF F
Sbjct: 309 FSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF-------FDEAL 361
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ VIK + +D+A + +++ G P+V+ YT +I K R E G +
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C P T+ V I L + A K+ M + G PD +TY +I GF ++
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A+K+ ML + P Y +++H C+ N A + ++ P +
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541
Query: 365 SALL 368
++LL
Sbjct: 542 TSLL 545
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + NIV+ C+ +DKA + +EM +G +P +++Y T+IS ++ + +
Sbjct: 19 DVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFF 78
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMG-LMQRFGIEPDEVTYNLVIKGFCR 303
N M+ GC P++ F I + + L+ ++RF PD Y VI G+C+
Sbjct: 79 NSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--RPDVFLYTSVIHGYCK 136
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+G LD K+ ML +P+ Y +I LC+ G + AY + + K + T
Sbjct: 137 AGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVT 196
Query: 364 ISALLEGLKKNNQ 376
L+E L + +
Sbjct: 197 FMTLIEALSNHGK 209
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 8/275 (2%)
Query: 104 EHQKSLPQGRREG-----FIM-RIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL 157
E ++ + Q R G FI ++ Y G + A +M GC V + +
Sbjct: 521 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 580
Query: 158 KVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
+L + + + + EK D ++ +I+ F ++G ++ A ++ M K GV
Sbjct: 581 DLLFSTGRVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGV 639
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD Y +L+ + K R + G+++ MV G PN TFNV + L ++ +A
Sbjct: 640 GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFS 699
Query: 278 LMG-LMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
L ++++ + P V+Y ++I G ++G + A + M+ R ++P Y ++I+ L
Sbjct: 700 LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSL 759
Query: 337 CQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ G A + +D +K P V SAL+ GL
Sbjct: 760 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSF 189
++ A+D +MH G V + N L L ++R + KAI+ FL E+P + I S+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFL-EMP-SMGCEPTIVSY 58
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N VI + +D+AY M G +PDVI +TTLI F K +P++G+ L N +
Sbjct: 59 NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL- 117
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
K P++ + I K++ M G PD Y ++I C+ G +D
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A +++ M + + + T+I L G + A + ++ +++ + P ++ +L+
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237
Query: 370 GLKKNNQPCKANTIMALV 387
L K + +AN I V
Sbjct: 238 ALCKAGKVDEANEIYQTV 255
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 2/247 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
KA I A++ F +M GC+ T+ S N + L + F + + + D+
Sbjct: 32 KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDV 90
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F +I FC+ G ++++ + K +PDV YT++I + K + G +
Sbjct: 91 IAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEE 149
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC P+ A + V I L R +A +L M++ G D VT+ +I+ G
Sbjct: 150 MLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK 209
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
LD A ++Y M+ R P ++ ++I LC+ G + A + + + K S ++
Sbjct: 210 LDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNS 269
Query: 367 LLEGLKK 373
L++G K
Sbjct: 270 LMDGYCK 276
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N ++ +C++G +D ++++M + PD+ TY L++ F + NR + L+ L+
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQAN-----------------------------KL 278
GC PN AT+ IQ L + +R +A +L
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACEL 385
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
++ G P+ V Y VI G ++G ++ K + M G +P R Y +I LC+
Sbjct: 386 FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCK 445
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
A + + ++K VP T + L++G K ++ +A ++ ++ + P
Sbjct: 446 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 2/245 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G + A F M GC + ++ ++ +++A L E+ K + D F+
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL-ELMAKSGVGPDCFA 645
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+N ++ + ++ +D+A+ V M G+KP+ +T+ L+ +KD + + L+ M+
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 705
Query: 249 CKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
K P L ++ + I L R +A M GI P+ TY +I ++G +
Sbjct: 706 EKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 765
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
AKK+ M+ + P+ + Y +I L + A+ + ++ MK+ P+ T L
Sbjct: 766 PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Query: 368 LEGLK 372
G +
Sbjct: 826 RRGFR 830
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 29/235 (12%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP------------------------- 219
DI ++NI++ F LD A + + G KP
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357
Query: 220 ----DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
DVI+YTT+I R + L+ + GC PN+ + I L+ R
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDG 417
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
K M P TY +VI G C++ L A KV+ M+ + +P+ Y T+I
Sbjct: 418 LKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 477
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ + A + + K P+ T +++ G K + +A ++A ++ R
Sbjct: 478 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM--EVPE 178
+M Y K + A + M G K + N + L +D K +AF + E+ E
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF--KDGKTDRAFSLFKEMLE 706
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + + S+ I+I + G + +A+ EM G+ P+ TYT+LI + K R
Sbjct: 707 KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 766
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L MV G P++ ++ I L++ A + M + G P+EVTY ++
Sbjct: 767 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 826
Query: 299 KGFCRSGH-LDM 309
+GF +G LD+
Sbjct: 827 RGFRAAGRALDL 838
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 7/250 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + F M GC + ++ L+ L E+ E+ + + +
Sbjct: 171 KLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPY-L 229
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+ +I A C+ G +D+A + + V + Y +L+ + K R + G L
Sbjct: 230 EVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQ 289
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV FP++ T+N+ + R A +L L+ +G +P+ TY +I+G +
Sbjct: 290 MVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQR 349
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ AK + L + Y T+I L + A + + P+V +A
Sbjct: 350 MEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTA 403
Query: 367 LLEGLKKNNQ 376
+++GL K +
Sbjct: 404 VIDGLLKAGR 413
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ Y ++G I+ A++ F + + L+ L + + K + F E+ E
Sbjct: 72 LITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++ FNI++ FC+ G + A V + K G++P V+++ TL+S + + + G
Sbjct: 132 YPA-SLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEG 190
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
L + M G P++ T++V I L + + +AN+L M G+ P+ VT+ +I G
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDG 250
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C++G +D+A ++Y +L + P+ Y T+I LC++GD A + + K P
Sbjct: 251 HCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPD 310
Query: 361 VDTISALLEG 370
T + L++G
Sbjct: 311 KITYTTLIDG 320
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LME 175
F +M + K G ++ A F + +G + +V S N + DL + F L
Sbjct: 138 FFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLD--EGFRLKS 195
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDN 235
+Q D+++++++I C+ +D+A + EM G+ P+ +T+TTLI K+
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 236 RPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
R ++ ++ ++ +G P+L T+N I L K QA L+ M ++PD++TY
Sbjct: 256 RVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYT 315
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+I G C+ G L+ A + M+ + + Y +I LCQEG
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 36/191 (18%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + AM+ + + G + + N + L + DLK + + E+ K ++ D
Sbjct: 253 KNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMK-ELKPDK 311
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ +I C+ G L+ A+ M K ++ D + YT LIS
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISG---------------- 355
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
L + RS A K++ M G++PD TY ++I FC+ G
Sbjct: 356 -------------------LCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGD 396
Query: 307 LDMAKKVYSAM 317
+ K+ M
Sbjct: 397 VKTGSKLLKEM 407
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ +Y K M++ + F M VK+ N L++L + +DL + + +F
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRD-KDLMSKAVEVYRTMGEF 534
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I+ I ++N ++ ++C+ G + + ++ EMQ+ G P+ +TY LI+ K E
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 594
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
GL M+ G + T+N I NK +A L M G P TYN I G
Sbjct: 595 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYG 654
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
C+ G + A + S ML L+P+ Y T+I+ C+ G+ A+++ + P+
Sbjct: 655 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 714
Query: 361 VDTISALLEGLKKNNQ 376
+ T + LL+GL + +
Sbjct: 715 IVTYNTLLDGLCRQGE 730
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 36/284 (12%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G ++ +D +M GC + N + L++ + + + + E+ K ++
Sbjct: 550 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML-KTGLKV 608
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE------ 238
+++N +I + G+L +A + EM G P V TY + I K R
Sbjct: 609 SAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 668
Query: 239 ---IGNGL------WNLMVCKGC--------------------FPNLATFNVRIQHLVNK 269
+ N L +N ++ C FP + T+N + L +
Sbjct: 669 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 728
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
A +L M GI PD VTY +++ G C+ G L MA++ + ML L + Y
Sbjct: 729 GELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAY 788
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
T I + GD + A+ + ++ + K + P + + +++GL K
Sbjct: 789 ATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 832
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEK 179
++YG G++ A+ +M L G TV + N+ + L + R A+Q +
Sbjct: 616 LIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN- 674
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
++ D+ S+N +I +C +G L KA+L+ E++ + + P ++TY TL+ + E+
Sbjct: 675 -NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEV 733
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L M+ +G P++ T+ + + A + M G+E D Y I
Sbjct: 734 AQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIV 793
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G + G A + ML + P+ IY ++ LC+ G+ A
Sbjct: 794 GELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 839
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 124 LYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM-EVPEKF 180
+YG K G + AM DM V S N + +L ++AFL+ +
Sbjct: 652 IYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL--MKAFLLFDELRSI 709
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
++ I ++N ++ C G L+ A + VEM G+ PD++TYT L++ K +
Sbjct: 710 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 769
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ M+ +G + + RI + + +A L M G PD + YN+V+ G
Sbjct: 770 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 829
Query: 301 FCRSGHLDMAKKV 313
C+ G+L+ A ++
Sbjct: 830 LCKLGNLEEASEL 842
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L L +L+ Q +E+ + I DI ++ I++ C+MG L A
Sbjct: 714 TIVTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEF 772
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM G++ D Y T I K L M+ KG P+L +NV + L
Sbjct: 773 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 832
Query: 269 KRRSWQANKLM 279
+A++L+
Sbjct: 833 LGNLEEASELL 843
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +I+ FC++G KA +M ++ G PDVITY LIS R L
Sbjct: 118 DIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLL 177
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +GC P++ TFN+ I L K +A ++ M + G P+ ++YN ++ GFC+
Sbjct: 178 ADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKE 237
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A + M R P+ Y T++ LC++G + A + K P + T
Sbjct: 238 KKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITY 297
Query: 365 SALLEGLKKNNQPCKANTIM 384
+ +++GL K + +A ++
Sbjct: 298 NTVIDGLSKVGKTDQAAKLL 317
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 8/285 (2%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGC 146
++ R+ I ++E ++P I +++ G G A DM GC
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPD-----VITYNVLISGMCSTGRWMDAEKLLADMVRRGC 185
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+V + N + L L L ++P K + S+N ++ FC+ +++A
Sbjct: 186 SPSVVTFNILINFLCRKGLLGRAIDVLEKMP-KHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+ +M G PD++TY TL++A KD + + L N + KGC P L T+N I L
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
++ QA KL+ M+ G++PD +TY+ ++ G R G +D A K + + + PN
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNA 364
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y ++ LC+ + A +++ P+ + + L+EGL
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGL 409
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ +FNI+I C G+L +A V+ +M K G P+ ++Y L+ F K+ + E
Sbjct: 189 VVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLG 248
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +GC+P++ T+N + L + A +L+ + G P +TYN VI G + G
Sbjct: 249 KMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 308
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D A K+ M + L P+ Y +++ L +EG + A D P+ T +
Sbjct: 309 KTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYN 368
Query: 366 ALLEGLKKNNQPCKANTIMA-LVQR 389
A++ GL K + +A +A +VQR
Sbjct: 369 AIMLGLCKARKTDRAIDFLAYMVQR 393
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G++ A+D M +GC S N L + + ++ +L ++ + DI
Sbjct: 201 RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR-GCYPDI 259
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N ++ A C+ G +D A ++ ++ G P +ITY T+I K + + L +
Sbjct: 260 VTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDE 319
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KG P++ T++ + L + + +A K ++ G++P+ +TYN ++ G C++
Sbjct: 320 MRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARK 379
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
D A + M+ R P Y +I L EG
Sbjct: 380 TDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEG 413
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ E D+ ++N++I C G A ++ +M + G P V+T+ LI+
Sbjct: 141 IMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLC 200
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ + M GC PN ++N + +++ +A + +G M G PD V
Sbjct: 201 RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIV 260
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN ++ C+ G +D A ++ + + + P Y T+I L + G + A + +
Sbjct: 261 TYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Query: 353 MKKNWVPSVDTISALLEGLKKNNQ 376
K P + T S+L+ GL + +
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGK 344
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L++ + + M G PD+I T+LI F K + + ++ G P++ T+
Sbjct: 98 GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
NV I + + R A KL+ M R G P VT+N++I CR G L A V M
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
PN Y ++H C+E A + P + T + LL L K+ +
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGK 274
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A++ + GC + + N + L++ L E+ K ++ DI
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK-GLKPDI 329
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ ++ G +D+A +++ LGVKP+ ITY ++ K + +
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
MV +GC P A++ + I+ L + + +A +L+
Sbjct: 390 MVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFD 185
K G A T+++M G V + ++ + L +++ + KA++ V K + D
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMV--KNGVMPD 270
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++N ++ +C G +A + +M+ GV+P+V+TY++L++ K+ R +++
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M +G P++AT+ +Q K + + L+ LM R GI+PD +N++I + +
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A V+S M L PN Y T+I LC+ G + A + + + + P++ +
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 366 ALLEGL 371
+L+ GL
Sbjct: 451 SLIHGL 456
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 2/210 (0%)
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
E R +++ + F + V + ++ DI ++N +I C G +D+A ++ M +GVKPD+
Sbjct: 494 EGRVIESEKLFDLMV--RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY TLI+ + + +R + L+ MV G PN+ T+N+ +Q L + RR+ A +L
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ + G + + TYN+++ G C++ D A +++ + L + + MI L + G
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A + VP V T S + E L
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENL 701
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 4/241 (1%)
Query: 167 KAIQAFLMEVPEKFH-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
K QA L+ + H + ++ + VI C+ G +D A L +M G+ P++I YT
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+LI ++ + L M+ +G N FN I + R ++ KL LM R
Sbjct: 451 SLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G++PD +TYN +I G C +G +D A K+ ++M+ + P+ Y T+I+ C+ + A
Sbjct: 511 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSI 405
+ K+ + P++ T + +L+GL + A + + + +LS + I
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL---ELSTYNII 627
Query: 406 L 406
L
Sbjct: 628 L 628
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 3/210 (1%)
Query: 134 AMD-TFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQF-DIFSFN 190
AMD M GC V S N LK L E+R +A++ M ++ D+ S+N
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
V+ F + G DKAY EM G+ PDV+TY+++I+A K + + N MV
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ T+N + + + +A + M+ G+EP+ VTY+ ++ C++G A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
+K++ +M R L P+ Y+T++ +G
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKG 355
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 20/246 (8%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
KRT +++ L+ +TE L +P D+FS+N ++K C+ +A
Sbjct: 141 KRTSDAMDIVLRRMTE----------LGCIP-------DVFSYNNLLKGLCDENRSQEAL 183
Query: 207 LV---MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
+ M + + G PDV++Y T+++ F+K+ + ++ M+ +G P++ T++ I
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L + +A +++ M + G+ PD +TYN ++ G+C SG A M +
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
PN Y ++++YLC+ G A + K+ P + T LL+G + + +
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363
Query: 384 MALVQR 389
+ L+ R
Sbjct: 364 LDLMVR 369
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 4/199 (2%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEIGNGLW 244
+ ++ I+I C G LD + + + K G + D IT+T L+ D R + + +
Sbjct: 92 VHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM---QRFGIEPDEVTYNLVIKGF 301
M GC P++ ++N ++ L ++ RS +A +L+ +M + G PD V+YN V+ GF
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+ G D A Y ML R ++P+ Y ++I LC+ + A + +K +P
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271
Query: 362 DTISALLEGLKKNNQPCKA 380
T +++L G + QP +A
Sbjct: 272 MTYNSILHGYCSSGQPKEA 290
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K + AM F M +G V + VL +S + + ++ ++ +
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDE-GLTP 444
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I + +I C DKA +++EM G+ + I + ++I + K+ R L+
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LMV G P++ T+N I + +A KL+ M G++PD VTY +I G+CR
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ M+ + PN Y ++ L A + K + T
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624
Query: 365 SALLEGLKKNN 375
+ +L GL KNN
Sbjct: 625 NIILHGLCKNN 635
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 183 QFDIFSFNIVIKAFC-EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ D +F ++K C + D +V+ M +LG PDV +Y L+ +NR +
Sbjct: 124 RVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEAL 183
Query: 242 GLWNLMV---CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L ++M G P++ ++N + + S +A M GI PD VTY+ +I
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C++ +D A +V + M+ +MP+ Y +++H C G A K
Sbjct: 244 AALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 303
Query: 359 PSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
P+V T S+L+ L KN + +A I + +R
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ DI ++ +I +C + +D A + EM GV P++ITY ++ + R
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L+ + G L+T+N+ + L + +A ++ + ++ + T+N++I
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G +D AK +++A L+P+ + Y M L ++G
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y + + A+ F +M G + + N L+ L +R A + + + K Q
Sbjct: 561 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-TKSGTQL 619
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ C+ + D+A + + ++ + T+ +I A K R + L+
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
G P++ T+++ ++L+ + + + L M+ G D N +++ +
Sbjct: 680 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739
Query: 305 GHLDMA 310
G + A
Sbjct: 740 GDITRA 745
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 6/301 (1%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEH--QKSLPQGRREGFIMRIMMLYGKAGMIKHAMD 136
N F + L R+F I +L++ Q+ L G I R Y +A +IK A+
Sbjct: 119 NTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLLNGDTFSLIAR---RYVRAKVIKEALK 175
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
TF M YG K + N + VL +S+ L + +++++ ++ S+ I+I+ +
Sbjct: 176 TFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGW 235
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
+ L K V EM+ G +PDV+TY +I+A+ K + + G+++ M+ K P+
Sbjct: 236 SQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSP 295
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+ I L N R +A + + G P+ TYN V+ +C S +D A ++
Sbjct: 296 HIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGE 355
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M + PN + Y ++ +L + G AY + + S + PSV T + ++ N
Sbjct: 356 MKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNEN 415
Query: 376 Q 376
Q
Sbjct: 416 Q 416
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + + I + G + +A V E+++ G+ PDV TY++LIS F K E L
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M KG PN+ +N + L +A KL M G+EPD VTY+ +I G+C+S
Sbjct: 384 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++ M + + P+ +Y ++H C+EGD A + ++ ++K + ++ +
Sbjct: 444 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SF 502
Query: 365 SALLEGLKKNNQPCKANTIMALVQRRV 391
+ L++G K+ CK L Q +
Sbjct: 503 NTLIDGYCKS---CKIQEASQLFQEMI 526
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ A + M GCK ++ ++ ++ L E+ EK ++
Sbjct: 92 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-EKRNLVPSA 150
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
S+ +I C L A ++ +M G+KP+V+ Y+TLI + + R E L +
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 210
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M C G P++ +N I L + +A+ + +Q G++PD VT+ I G+ ++G
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ A K + ML LMPN +Y +I+ + G+ A + + +P V T SA
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330
Query: 367 LLEGLKKNNQ 376
+ GL KN +
Sbjct: 331 FIHGLLKNGR 340
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAAL-KVLTESRDLKAIQAFLMEVPEKFHIQFD 185
KAG + A+ F +H G V++ +A + +L R +A++ F E+ EK + D
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF-SELKEKGLVP-D 359
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+++ +I FC+ G ++KA+ + EM G+ P++ Y L+ K + L++
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN---------- 295
M KG P+ T++ I +A L M G++P YN
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479
Query: 296 ------------------------LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+I G+C+S + A +++ M+ +++MP+ Y T
Sbjct: 480 DMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
+I + C+ G A ++ K+ ++N + VDT+ AL E
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLI--VDTVFALFE 575
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++ I+ C +++A L EMQK G+KPD + LI F ++ + +
Sbjct: 9 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++MV G NL T+NV I L + +A +++ M G +P+ T+ L+I+G+CR
Sbjct: 69 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 128
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
++ A ++ M R L+P+ Y MI+ LC D +LA + + P+V
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188
Query: 365 SALLEG 370
S L+ G
Sbjct: 189 STLIMG 194
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD---------- 234
DIF +N +I + G +++A ++E+Q G+KPD +T+ I + K
Sbjct: 219 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYF 278
Query: 235 ----------NRP----------EIGNGLWNLMVCK-----GCFPNLATFNVRIQHLVNK 269
N P + GN + L + + G P++ T + I L+
Sbjct: 279 DEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 338
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
R +A K+ ++ G+ PD TY+ +I GFC+ G ++ A +++ M + + PN IY
Sbjct: 339 GRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIY 398
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
++ LC+ GD A + +K P T S +++G K+ +A
Sbjct: 399 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 36/295 (12%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++M Y G I+ A M G + NA + L+++ ++ +L+E+ +
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR- 249
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKA------------------YLVMV------------ 210
++ D +F I + + G + +A Y V++
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309
Query: 211 -----EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ LGV PDV T + I K+ R + +++ + KG P++ T++ I
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ +A +L M GI P+ YN ++ G C+SG + A+K++ M + L P+
Sbjct: 370 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 429
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
Y TMI C+ + A+ + + K P +AL+ G K KA
Sbjct: 430 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 484
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
TF +M G K + +A + D+ + + +V I ++ ++N++I
Sbjct: 32 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR-IKDVMVSCGIPINLITYNVLIHGL 90
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ G ++KA ++ M LG KP+ T+ LI + +++ L + M + P+
Sbjct: 91 CKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 150
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
++ I L + + ANKL+ M G++P+ V Y+ +I G+ G ++ A+++
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 210
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
M + P+ Y +I L + G A + + P T A + G K +
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270
Query: 377 PCKA 380
+A
Sbjct: 271 MTEA 274
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G I+ A F M G + + + + +S ++ + E+P K +Q
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK-GVQPHS 465
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F +N ++ C+ G ++KA + EM + G +++ TLI + K + + + L+
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQE 524
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF-----------------GIEP 289
M+ K P+ T+ I + +AN L MQ G++P
Sbjct: 525 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKP 584
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
DEVTY LVI C+ +L A K+ ++G+ ++ I+ +I LC+ D A +
Sbjct: 585 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 644
Query: 350 KDSMKKNWVPSVDTISALL 368
+ + PS+ S L+
Sbjct: 645 DEMGELGLKPSLAACSTLV 663
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G ++ AM+ F +M G T+ S N + +S ++ E+ K I D
Sbjct: 477 KEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDH 534
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKL-----------------GVKPDVITYTTLIS 229
++ VI C+ G +++A L+ EMQ+ GVKPD +TY +I
Sbjct: 535 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIY 594
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
A K++ L + +V KG ++ I L + +A+KL+ M G++P
Sbjct: 595 AHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKP 654
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ +++ F +G +D A +V+ + L+P+
Sbjct: 655 SLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 690
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG PN T+ + L +R +A MQ+ G++PD + +I GF R G +D
Sbjct: 4 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 63
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
++ M+ + N Y +IH LC+ G A + K + P+ T L+E
Sbjct: 64 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 370 GLKKNNQPCKANTIMALVQRR 390
G + + +A ++ +++R
Sbjct: 124 GYCREHNMGRALELLDEMEKR 144
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 154/326 (47%), Gaps = 3/326 (0%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGF 117
RD ++ F F + ++ N + + + L A R + LL+ +S+
Sbjct: 381 RDFDEAFATFDV-MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 118 IMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
+ + +GK+G A++TF M G + + NA+L L E L+ + +
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E + D ++N+++K + ++G +D+A ++ EM + G +PDVI +LI + YK R
Sbjct: 500 EN-GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRV 558
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ +++ M P + T+N + L + R +A +L M P+ +++N +
Sbjct: 559 DEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTL 618
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ FC++ +++A K++S M P+ Y T+I+ L +E N A+ +KK+
Sbjct: 619 LDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH-QLKKSM 677
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P TI LL GL K Q A +I
Sbjct: 678 HPDHVTICTLLPGLVKCGQIGDAISI 703
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK-AIQAFLMEVPEKFHIQF 184
K G ++ AM F +M YGCK N + + D + A Q F V E I+
Sbjct: 904 AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE--GIRP 961
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ S+ I++ C G +D+A E++ G+ PD I Y +I+ K R E L+
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M +G P+L T+N + +L QA ++ +Q G+EPD TYN +I+G+ S
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
+ + A VY M+ PN Y +
Sbjct: 1082 ENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 135 MDTFYD----MHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSF 189
+DTF + M G V + + VL ++RD +AF +V K I ++ ++
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD--EAFATFDVMRKQGILPNLHTY 405
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
N +I G ++ A ++ M+ +GV+P TY T I F K + M
Sbjct: 406 NTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKA 465
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG PN+ N + L R +A + ++ G+ PD VTYN+++K + + G +D
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A + S M+ P+ + ++I L + G + A+ M P+V T + LL
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Query: 370 GLKKNNQPCKA 380
GL K + KA
Sbjct: 586 GLGKEGRVQKA 596
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 3/264 (1%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEK 179
++ ++GK+G I + + +M CK + N + L +S +L KA+ F V
Sbjct: 829 LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
F ++ +I ++G L++A + EM G KP+ + LI+ + K E
Sbjct: 889 FRPTPR--TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTET 946
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L+ MV +G P+L ++ + + L R +A ++ G++PD + YN +I
Sbjct: 947 ACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIIN 1006
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
G +S ++ A +Y+ M R ++P+ Y +++ L G A M ++ P
Sbjct: 1007 GLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Query: 360 SVDTISALLEGLKKNNQPCKANTI 383
V T +AL+ G + P A T+
Sbjct: 1067 DVFTYNALIRGYSLSENPEHAYTV 1090
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 42/269 (15%)
Query: 109 LPQGRREGFIMR------IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE 162
L + R+ GF++ ++ L ++G A++ + M G K ++K+ +A + L +
Sbjct: 180 LNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK 239
Query: 163 SRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
RD + + L E M+ LG++P+V
Sbjct: 240 KRDSEMVMVLLKE------------------------------------MEDLGLRPNVY 263
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
T+T I + + + ++ M +GC P+L T+ V I L N + A +L M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G +PD+V Y ++ F G LD K+ +S M MP+ + ++ LC+ DF
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ A+ K+ +P++ T + L+ GL
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGL 412
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 1/264 (0%)
Query: 126 GKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD 185
G+AG I A + F M GC + + + L + L+ + +++ H + D
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-KPD 331
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ ++ F + G LD +M+ G PDV+T+T L+ K + ++
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD 391
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M +G PNL T+N I L+ R A KL+ M+ G++P TY I F +SG
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSG 451
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + + M + ++PN ++ L + G A M + P T +
Sbjct: 452 ETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYN 511
Query: 366 ALLEGLKKNNQPCKANTIMALVQR 389
+++ K Q +A +++ + R
Sbjct: 512 MMMKCYSKVGQVDEAVNLLSEMIR 535
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+S+N +I + G +A V M G+KP + TY+ L+ A K E+ L
Sbjct: 193 YSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M G PN+ TF + I+ L + +A ++ M G PD VTY ++I C +G
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
L+ AK+++ M P++ IY T++ GD + ++P V T +
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 367 LLEGLKK 373
L++ L K
Sbjct: 373 LVDVLCK 379
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN+++ + G + + + + EM KPD ITY +IS+ K N + +
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+V P T+ I L R +A +L M +G +P+ +N++I G+ +
Sbjct: 882 YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A +++ M+ + P+ K Y ++ LC G + A + P
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 365 SALLEGLKKNNQ 376
+ ++ GL K+ +
Sbjct: 1002 NRIINGLGKSQR 1013
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
R+L A Q F + +K I + S+N +I E+ +KA+ + +M+ +G PD T
Sbjct: 767 RELYAYQIF-DKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ L++ K + L+ M+ + C P+ T+N+ I L +A +
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
P TY +I G + G L+ A +++ M PN I+ +I+ + GD
Sbjct: 886 SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGL 371
A + K + + P + + + L++ L
Sbjct: 946 TACQLFKRMVNEGIRPDLKSYTILVDCL 973
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P LA++N I L+ + +A L M+ G PD T+N+++ +SG +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++Y M+ RR P+ Y +I L + + + A D + ++ P+ T L++G
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 371 LKK 373
L K
Sbjct: 903 LAK 905
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 39/305 (12%)
Query: 117 FIMRIMM-LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLM 174
F+ IM+ Y K G + A + ++M G + S N+ + + + KA + +
Sbjct: 385 FVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT 444
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
+ F ++N ++K FC +G +D A + M K G+ P+ I+ +TL+ F+K
Sbjct: 445 MLRNGFAAT--TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKS 502
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
+ E LW + +G N TFN I L R +A +L+ M+++ PD +TY
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562
Query: 295 NLVIKGFCRSGHLDMAKKVYS-----------------------------------AMLG 319
+ G+C+ G +D A ++ + M
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSN 622
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCK 379
R L PN Y +I C+EGD + AY + + ++K VP++ S+L+ + + +
Sbjct: 623 RGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDE 682
Query: 380 ANTIM 384
AN ++
Sbjct: 683 ANLVL 687
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 127/323 (39%), Gaps = 70/323 (21%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME------VPEKF- 180
AG + A+ F +M GC+ +++S N+ L L ++ DL A A + +P+KF
Sbjct: 186 AGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFT 245
Query: 181 ---------------------------HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
++ ++ +++ V+ +CE+G + A ++ +
Sbjct: 246 VAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP 305
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNG------------------------------- 242
G P+++TYT L+ + + E G
Sbjct: 306 GRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRM 365
Query: 243 -----LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L N MV NL +N+ I R +A+ ++ M G+ PD +YN +
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+C+ G ++ A + Y+ ML Y ++ C G + A + +KK
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGI 485
Query: 358 VPSVDTISALLEGLKKNNQPCKA 380
P+ + S LL+G K+ + KA
Sbjct: 486 APNEISCSTLLDGFFKSGKTEKA 508
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 84/157 (53%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q ++F +NI+I +C++G + +A+ ++ EM +GV+PD +Y +L+ + K
Sbjct: 380 LQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAF 439
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+N M+ G T+N ++ + A +L LM + GI P+E++ + ++ GF
Sbjct: 440 ETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGF 499
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+SG + A ++ L R L N + T+I+ LC+
Sbjct: 500 FKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCK 536
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----DNRPEIGNGL 243
+FN VI C++ + +A ++ +M++ PD+ITY TL S + K D I N L
Sbjct: 526 TFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNEL 585
Query: 244 WNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
NL G P + FN I H + K+ + N ++ M G+ P+ V Y +I G+C
Sbjct: 586 ENL----GFAPTIEFFNSLITGHFIAKQHG-KVNDILFEMSNRGLSPNTVAYGALIAGWC 640
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A +Y M+ + L+PN I +++ ++G F+ A ++ ++ + + +P +
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+NIVI C++G ++ A ++ +++ G D TY++LI ++ L + M+
Sbjct: 728 WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTML 787
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ T+N I L +A L + GI P+ +TYN +I C+ G++
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A K+ M+ + P Y +I+ LC +G A + ++ N P+ T L+
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 369 EG 370
+G
Sbjct: 908 QG 909
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 1/273 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y + G A + G + + +K ++++ + + E+ +
Sbjct: 284 VMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK 343
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ D F VI +C+MG ++ A ++ EM ++ ++ Y +I+ + K R
Sbjct: 344 QLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEA 403
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + + M G P+ ++N + K +A + M R G +TYN ++KG
Sbjct: 404 HNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKG 463
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
FC G +D A +++ ML + + PN T++ + G A + K+++ + +
Sbjct: 464 FCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKN 523
Query: 361 VDTISALLEGL-KKNNQPCKANTIMALVQRRVP 392
T + ++ GL K P + + Q R P
Sbjct: 524 TTTFNTVINGLCKIERMPEAEELVDKMKQWRCP 556
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+++ +I G +D A+ + M +G+ P+++TY +LI K L+
Sbjct: 759 DNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLF 818
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG PN T+N I +A KL M GI P TY+++I G C
Sbjct: 819 KKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQ 878
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIH 334
G+++ A K+ M+ + PN Y T+I
Sbjct: 879 GYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 142/326 (43%), Gaps = 17/326 (5%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EK L+K R + +N F ++ L R E L++ K Q R I+
Sbjct: 506 EKALNLWKETLA-RGLAKNTTTFNTVINGLCKIERMPEAEELVDKMK---QWRCPPDIIT 561
Query: 121 IMML---YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVP 177
L Y K G + A ++ G T++ N+ + ++ + L E+
Sbjct: 562 YRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMS 621
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
+ + + ++ +I +C+ G L AY + +EM + G+ P++ ++L+S FY+ +
Sbjct: 622 NR-GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF 680
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
+ N + +V P+++ + I + N + + ++ +N+V
Sbjct: 681 DEANLVLQNLVGTDMIPDISAPRLEIGKVAN---------FIDTVAGGNHHSAKIMWNIV 731
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I G C+ G ++ AK + + + + + + Y ++IH G ++A+ + +
Sbjct: 732 IFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGL 791
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P++ T ++L+ GL K+ + +A ++
Sbjct: 792 TPNIVTYNSLIYGLCKSGELSRAVSL 817
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I C+ G L +A + ++ G+ P+ ITY TLI KD L
Sbjct: 794 NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLK 853
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G P + T+++ I L + +A KL+ M ++P+ VTY +I+G+ R
Sbjct: 854 QRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRC 913
Query: 305 GHLDM 309
+D+
Sbjct: 914 ESVDV 918
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L+EV ++F F SF+++++A G LD A V EM+ LG + + + ++++
Sbjct: 162 LVEVYKEF--SFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLA 219
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ M G P+ T + + + A + + M + G+E + V
Sbjct: 220 QTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLV 279
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
Y+ V+ G+C G + A+++ ++ GR PN Y ++ C E
Sbjct: 280 AYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNE 326
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G + A D M G + + N+ + L +S +L + ++ K I +
Sbjct: 773 SGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTK-GISPNAI 831
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C+ G + +A+ + M + G+ P V TY+ LI+ E L + M
Sbjct: 832 TYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQM 891
Query: 248 VCKGCFPNLATFNVRIQHLV 267
+ PN T+ IQ V
Sbjct: 892 IENNVDPNYVTYWTLIQGYV 911
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME---VP 177
++YG K+G + A+ F + G + N + +D +AF ++ +
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLID--KHCKDGYITEAFKLKQRMIE 858
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
E H +F+++I+I C G +++A ++ +M + V P+ +TY TLI + +
Sbjct: 859 EGIHPT--VFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
K G +K A+D + M +GC+ V S N+ + + D+++ L + F +
Sbjct: 68 KLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKP 127
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI SFN + F +M +LD+ ++ M M K P+V+TY+T I F K ++ +
Sbjct: 128 DIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELKLALKSF 186
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M FPN+ TF I L M+R + + VTY +I GFC+
Sbjct: 187 NCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
G + A +Y ML R+ PN +Y T+I+ Q GD
Sbjct: 247 GEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGD 283
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +F +I +C+ G L+ + EM+++ + +V+TYT LI F K + G++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMY 256
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ PN + I + S A K + M G+ D Y ++I G C
Sbjct: 257 LRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGI 316
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L A ++ M L+P+ I+ TM++ + G A M +++ + P V +
Sbjct: 317 GKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 365 SALLEGLKKNNQ 376
S +++G+ KN Q
Sbjct: 377 STMIDGIAKNGQ 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
++ DI ++ ++I C +G L +A ++ +M+K + PD++ +TT+++A++K R +
Sbjct: 299 MRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAV 358
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE-PDEVTYNLVIKG 300
+++ ++ +G P++ + I + + +A + F E ++V Y ++I
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------ISYFCTEKANDVMYTVLIDA 412
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
C+ ++++S + L+P++ +Y + I LC++G+ A+
Sbjct: 413 LCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
++ K+G +K A+ +F M V + + ++ DL+ + + L E + +
Sbjct: 172 MFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVS-LYEEMRRVRMS 230
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++ ++ +I FC+ G + +A + + M + V+P+ + YTT+I+ F++ +
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKF 290
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M+ +G ++ + V I L + +A +++ M++ + PD + + ++ + +
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFK 350
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
SG + A +Y ++ R P+ TMI + + G + A
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEK 179
+M Y K+G +K A++ ++ + G + V +L+ + + ++ L +AI F E
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKAN- 402
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
D+ + ++I A C+ + + ++ + G+ PD YT+ I+ K
Sbjct: 403 -----DVM-YTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
L MV +G +L + I L +K +A ++ M R G+ PD ++L+I+
Sbjct: 457 AFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIR 516
Query: 300 GFCRSGHLDMAKKVYSAMLGRRL 322
+ + G++ A + M R L
Sbjct: 517 AYEKEGNMTTASDLLLDMQTRGL 539
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y A + AMD +++Y T L L+ R K + ++ EK +++
Sbjct: 289 YDDAWEVYEAMDK---INVYPDNVTCAILITTLR--KAGRSAKEVWEIFEKMSEK-GVKW 342
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
F ++K+FC+ G+ ++A ++ EM+K G++ + I Y TL+ A+ K N E GL+
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KG P+ AT+N+ + + + L+ M+ G+EP+ +Y +I + R+
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 305 GHL-DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI----MCKDSMKKNWVP 359
+ DMA + M L P+ Y +IH G AY MCK+ +K P
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIK----P 518
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQR 389
SV+T +++L+ +++ K I L+ R
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 3/254 (1%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
+M G + VKS + ++ + + A +K ++ S+ +I A+
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G +KAY EM K G+KP V TYT+++ AF + +W LM+ + T+
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N + + +A ++ + G++P +TYN+++ + R G ++ M
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP---SVDTISALLEGLKKNNQ 376
L P+ Y TMI+ + DF A+ K +K VP S + + A+LE K
Sbjct: 619 LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
Query: 377 PCKANTIMALVQRR 390
I+ ++ +
Sbjct: 679 RKDKTAILGIINSK 692
>gi|195640760|gb|ACG39848.1| hypothetical protein [Zea mays]
Length = 359
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 126/266 (47%), Gaps = 31/266 (11%)
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ ++D LY RTV++ N +P + I+ + S N+++K
Sbjct: 92 LSAYHDNRLY--DRTVRAFNT--------------------LPAELGIKPGLVSHNVLLK 129
Query: 195 AFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC--KG 251
A G + A+ + EM GV+PD+++ ++ + + + L + +
Sbjct: 130 ALVASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRR 189
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN+ T+N+R+ L +K RS++A +L+ +M G+ P+ ++N VIKG C G + A
Sbjct: 190 LKPNVGTYNLRMALLCSKMRSFEAEELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGAAM 249
Query: 312 KVYSAML------GRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ M G+ + PN + Y ++ L ++ F+ A +CK+ ++ W P +
Sbjct: 250 ALFKRMPEVPRQHGKGVSPNFETYIMLLEALVKKNLFDPALEICKECLRNKWAPPFQAVK 309
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRV 391
L++GL K+ + A + +++ V
Sbjct: 310 GLVQGLLKSRKAKHAREVFMAMRKAV 335
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI + N ++ FC + A ++ +M ++G KPD +T+TTLI + N+ L
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +GC P+L T+ + L + + A L+ M+ IE + V Y+ VI C+
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
H D A +++ M + + PN Y ++I LC G ++ A + D +++ P++ T
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 365 SALLEGLKKNNQPCKA 380
SAL++ K + KA
Sbjct: 327 SALIDAFVKKGKLVKA 342
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++ +I C G A ++ +M + + P+++T++ LI AF K + L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ + PN+ T++ I R +A +++ LM R P+ VTYN +I GFC++
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D +++ M R L+ N Y T+IH Q D + A ++ K + P++ T
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ LL+GL KN + KA + +QR
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQR 491
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 1/218 (0%)
Query: 175 EVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
E E I +++++NI+I FC L A ++ +M KLG +PD++T +L++ F
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
NR L + MV G P+ TF I L ++ +A L+ M + G +PD VTY
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
V+ G C+ G D+A + + M ++ N IY T+I LC+ + A + +
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A++ F +M G + V + ++ + L L ++ E+ I ++ +F+ +I
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALI 330
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
AF + G L KA + EM K + P++ TY++LI+ F +R + LM+ K C
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ T+N I +R + +L M + G+ + VTY +I GF ++ D A+ V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ + PN Y ++ LC+ G A ++ + + P + T + ++EG+ K
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ V+ C+ G D A ++ +M+ ++ +V+ Y+T+I + K +
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I P+ VT++ +I F
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + PN Y ++I+ C A M + ++K+ +P+V
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 363 TISALLEGLKK 373
T + L+ G K
Sbjct: 395 TYNTLINGFCK 405
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I +IF+++ +I FC + L +A ++ M + P+V+TY TLI+ F K R +
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G N T+ I R A + M G+ P+ +TYN+++
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
G C++G L A V+ + + P+ Y MI +C+ G + + I
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D +F +I +A ++ M + G +PD++TY +++ K ++ L
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N M N+ ++ I L R A L M+ G+ P+ +TY+ +I C
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ++ S M+ R++ PN + +I ++G A + ++ +K++ P++ T
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
S+L+ G ++ +A ++ L+ R+
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRK 387
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P +I ++ L+SA K N+ ++ M G NL T+N+ I R A L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G M + G EPD VT N ++ GFC + A + M+ P+ + T+IH L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ A + +++ P + T A++ GL K + +T +AL
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK-----RGDTDLAL 238
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D +M+ LG+ ++ TY LI+ F + +R + L
Sbjct: 78 IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLG 137
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T N + + R A L+ M G +PD VT+ +I G
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
A + M+ R P+ Y +++ LC+ GD +LA
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 147/292 (50%), Gaps = 9/292 (3%)
Query: 111 QGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLK 167
+G R + +++G + G + ++ F M C TV++ + L ES R ++
Sbjct: 33 KGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRME 92
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
AI F E+ E+ + +I ++ ++I A C+ L++ ++ EM + G+ P V TY L
Sbjct: 93 AINLF-SEMRER-GCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I + K+ E + +LM C PN T+N I K+ +A L+ M +
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P VTYN +I G C+ G+LD A ++ + M ++P++ Y I LC++G A +
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANV 270
Query: 348 MCKDSMKKNWVPSVDTI-SALLEGLKKNNQPCKANTIM--ALVQRRVPHFSS 396
+ +S+K+ + + + I +AL++G K + AN+++ L + +P+ S+
Sbjct: 271 L-FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSST 321
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K GM++ A + MH C ++ N + +++ A L ++ E +
Sbjct: 154 YCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES-RLTP 212
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ ++N +I C++G LD AY ++ M + GV PD TY+ I K R E N L+
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N + KG N + I + AN L+ M P+ TYN +I G C+
Sbjct: 273 NSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKE 332
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A + +M+ + L Y +I + +EGDF+ A+ + + + P V
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIY 392
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+A + +A +M+++ R
Sbjct: 393 TAFIHAFCTRGNIKEAEDMMSMMFER 418
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 43/239 (17%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D++ + I AFC G + +A +M M + GV PD +TYT +I A+ G G
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG-------GLG 438
Query: 243 LWN-------LMVCKGCFPNLATFNVRIQHLVNKRRS----------------------- 272
L N M GC P+ T++ I+HL+ + +
Sbjct: 439 LLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADV 498
Query: 273 WQANKLMGLMQRF------GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
W+ K ++ F G P+ TY +I G C+ G L +A+K++ M R + P+
Sbjct: 499 WKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSE 558
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
IY ++++ C+ G + A + M+ +P +++++ L GL + KA + +
Sbjct: 559 AIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFS 617
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++N +I C+ + +A L+M M + G+K V TYT LI A K+ + + + + M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V G P++ + I + +A +M +M G+ PD +TY LVI + G L
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ A V M P+ Y +I +L +E
Sbjct: 441 NPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE 472
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I +C+ G +D A ++ M P+ TY LI K+ + + L M+
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMI 346
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
KG + T+ + I ++ + A++++ M G +PD Y I FC G++
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ + S M R +MP+ Y +I G N A+ + K PS T S L+
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Query: 369 EGLKK 373
+ L K
Sbjct: 467 KHLLK 471
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 29/235 (12%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----------- 233
D ++ +VI A+ +G+L+ A+ V+ M G P TY+ LI K
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVA 482
Query: 234 --DNRP----------------EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
D+ P E L+ M+ GC PN+ T+ I L R A
Sbjct: 483 LCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVA 542
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
KL M G+ P E YN ++ C G A ++ AM+ +P + +
Sbjct: 543 QKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCG 602
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
L +EG A ++ + ++ + L++GL KN + ++ +++ R
Sbjct: 603 LYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEAR 657
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%)
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
++N+M KGC N ++ I L R + + M+ P TY +++
Sbjct: 26 VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALF 85
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
SG A ++S M R PN Y MI+ +C+E + + ++K VPSV
Sbjct: 86 ESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP 145
Query: 363 TISALLEGLKKNNQPCKANTIMALVQ 388
T +AL++G K A I+ L+
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMH 171
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A++ F M +GC + + + L + L Q + E+ + +N ++
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNER-GVSPSEAIYNSLL 565
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW-NLMVCKGC 252
CE+GI A ++ M + G P + + L Y++ E ++ NL+ C G
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQC-GY 624
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+ + + I L+ S ++L+G+M+ G + TY ++I+G
Sbjct: 625 NDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,917,819,731
Number of Sequences: 23463169
Number of extensions: 237070932
Number of successful extensions: 770914
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5249
Number of HSP's successfully gapped in prelim test: 3559
Number of HSP's that attempted gapping in prelim test: 677169
Number of HSP's gapped (non-prelim): 51809
length of query: 409
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 264
effective length of database: 8,957,035,862
effective search space: 2364657467568
effective search space used: 2364657467568
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)