BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015329
(409 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GW57|PP134_ARATH Pentatricopeptide repeat-containing protein At1g80150,
mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2
SV=2
Length = 397
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/406 (62%), Positives = 306/406 (75%), Gaps = 9/406 (2%)
Query: 1 MLSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDP 60
MLSLR RRFCH ++AA IA + + + KPLE PALVKLK+ERDP
Sbjct: 1 MLSLRHIRRFCHFPSSAAT-GIAYVSTESNQIQGL--------KPLEEPALVKLKSERDP 51
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
EKL+ LFKANA NR+VIEN++AFEDTVSRLAGA R D+IE LLEHQK+LPQGRREGFI+R
Sbjct: 52 EKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVR 111
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+MLYGKAGM K A+DTF++M LYGCKR+VKS NAAL+VL+ + DL I FL + P K+
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I D SFNI IK+FCE+GILD AY+ M EM+K G+ PDV+TYTTLISA YK R IG
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
NGLWNLMV KGC PNL TFNVRIQ LVN+RR+W AN L+ LM + +EPD +TYN+VIKG
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
F + DMA++VY+AM G+ PN KIYQTMIHYLC+ G+F+LAY MCKD M+K W P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 361 VDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSIL 406
+DT+ LL+GL K Q +A +IM LV RRVP F S QL + KSIL
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397
>sp|Q8LE47|PPR87_ARATH Pentatricopeptide repeat-containing protein At1g61870,
mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2
SV=2
Length = 408
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 208/355 (58%), Gaps = 1/355 (0%)
Query: 37 NREPLVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRF 96
++ PL K AL LK+E+DP+++ ++ +A + ++ AF V LA + F
Sbjct: 37 SKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHF 96
Query: 97 DYIEHLLE-HQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNA 155
+ +LL+ ++ P + E F ++LY +A M+ H++ F D+ + RTVKSLNA
Sbjct: 97 SAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNA 156
Query: 156 ALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
L ++D K + +E+P+ + I+ D+ ++N +IK FCE G +Y ++ EM++
Sbjct: 157 LLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERK 216
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
G+KP+ ++ +IS FY +++ + + +M +G ++T+N+RIQ L +++S +A
Sbjct: 217 GIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
L+ M G++P+ VTY+ +I GFC + AKK++ M+ R P+ + Y T+I+Y
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYY 336
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
LC+ GDF A +CK+SM+KNWVPS + +L+ GL K+++ +A ++ V+ +
Sbjct: 337 LCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>sp|Q9M065|PP352_ARATH Pentatricopeptide repeat-containing protein At4g36680,
mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=1
SV=1
Length = 412
Score = 218 bits (554), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 206/393 (52%), Gaps = 21/393 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
+SLR RRF AA A + I S++K A L+ E DP+
Sbjct: 6 ISLRLVRRFASAAADGTTTAPSSGKI---SVSK---------------AKSTLRKEHDPD 47
Query: 62 KLFQLF-KANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K +++ + H+ + ++YA E TV RLA RRF IE L+E K+ P+ + E F
Sbjct: 48 KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYST 107
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
++ YG+A M HAM TF M YG R+ S NA L S++ + E+P+++
Sbjct: 108 LIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRY 167
Query: 181 H-IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEI 239
+ I D S+ I+IK++C+ G +KA +M +MQ G++ I +TT++S+ YK E+
Sbjct: 168 NKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV 227
Query: 240 GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIK 299
+ LWN MV KGC + A +NVRI K + +L+ M G++PD ++YN ++
Sbjct: 228 ADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMT 286
Query: 300 GFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP 359
+C G LD AKKVY + G PN ++T+I +LC + Y + K S+ + +P
Sbjct: 287 AYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIP 346
Query: 360 SVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+T+ L+ GL +N + A ++ V+++ P
Sbjct: 347 DFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFP 379
>sp|Q9LG23|PPR82_ARATH Pentatricopeptide repeat-containing protein At1g55890,
mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1
SV=1
Length = 398
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 196/366 (53%), Gaps = 9/366 (2%)
Query: 32 LNKFPNREPLVDKP------LEPP--ALVKL-KAERDPEKLFQLFKANAHNRIVIENKYA 82
+ +F + +V +P + PP +L L ER+P+++ + FK + N
Sbjct: 17 IRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAV 76
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
++ TV RL A+R Y+E +LE QK +EGF RI+ LYGKAGM ++A F +M
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMP 136
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
CKR+V S NA L S+ ++ E+P K I+ DI S+N +IKA CE L
Sbjct: 137 NRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSL 196
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A ++ E++ G+KPD++T+ TL+ + Y + E+G +W MV K ++ T+N R
Sbjct: 197 PEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNAR 256
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
+ L N+ +S + L G ++ G++PD ++N +I+G G +D A+ Y ++
Sbjct: 257 LLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGY 316
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANT 382
P++ + ++ +C+ GDF A + K++ K ++ T+ L++ L K ++ +A
Sbjct: 317 RPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEE 376
Query: 383 IMALVQ 388
I+ + +
Sbjct: 377 IVKIAK 382
>sp|Q9ZU67|PP162_ARATH Pentatricopeptide repeat-containing protein At2g18520,
mitochondrial OS=Arabidopsis thaliana GN=At2g18520 PE=2
SV=1
Length = 418
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 187/345 (54%), Gaps = 7/345 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIV-IENKYAFEDTVSRLAGARRFDYIEHLLEHQKS 108
A KL+ +DP+K ++K+ ++N + ++YA E TV RLA ++RF IE L+E K+
Sbjct: 36 AKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKN 95
Query: 109 LPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA 168
P+ + E F+ ++ YG+A M HAM F +M G RTV S NA L S +
Sbjct: 96 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFER 155
Query: 169 IQAFLMEVPEKF-HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ E P+++ +I D S+ ++IK++C+ G +KA +M +M+ GV+ +I +TT+
Sbjct: 156 VPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTI 215
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
+ + YK+ + LW MV KGC + +NVR+ + K + +LM M G+
Sbjct: 216 LGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAA-KESPERVKELMEEMSSVGL 274
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
+PD V+YN ++ +C G + AKKVY + PN ++T+I +LC G ++
Sbjct: 275 KPDTVSYNYLMTAYCVKGMMSEAKKVYEGL----EQPNAATFRTLIFHLCINGLYDQGLT 330
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
+ K S + +P T L EGL KNN+ A + +V+++ P
Sbjct: 331 VFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFP 375
>sp|Q9SAB4|PPR33_ARATH Pentatricopeptide repeat-containing protein At1g11630,
mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1
SV=1
Length = 405
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 192/338 (56%), Gaps = 1/338 (0%)
Query: 54 LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLE-HQKSLPQG 112
LK+E +P+++ ++ ++ + + ++ F V LA + F + LL+ ++ P
Sbjct: 49 LKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDP 108
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
+ E F +R ++LYG+A M+ ++ TF ++ Y RTVKSLNA L ++D K
Sbjct: 109 KSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRV 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+E+P+ + I+ D+ ++N +I+ CE G +Y ++ EM++ +KP ++ +I FY
Sbjct: 169 YLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFY 228
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
K+ + + + +M G +AT+N+ IQ L +++S +A L+ + + P+ V
Sbjct: 229 KEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSV 288
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY+L+I GFC +LD A ++ M+ P+ + Y T+IH LC+ GDF A I+C++S
Sbjct: 289 TYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRES 348
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
M+KNWVPS + L+ GL ++ +A ++A+V+ +
Sbjct: 349 MEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
>sp|Q9LK57|PP226_ARATH Pentatricopeptide repeat-containing protein At3g13160,
mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1
SV=1
Length = 394
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 185/387 (47%), Gaps = 22/387 (5%)
Query: 2 LSLRPNRRFCHTAAAAAADAIALNNIRAVSLNKFPNREPLVDKPLEPPALVKLKAERDPE 61
S NRRF AAAA P +P + + ERDP+
Sbjct: 15 FSTHTNRRFFSAVTAAAA----------------------TPSPPKPSLITLVNDERDPK 52
Query: 62 KLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRI 121
+ + FK +N +E TV RLA A++F+++E +LE Q P +EGF+ RI
Sbjct: 53 FITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARI 112
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ LYG+ GM ++A F +M CKRT S NA L S+ ++ E+P K
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ S+N +IK C G +A ++ E++ G+KPD IT+ L+ Y + E G
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
+W MV K ++ ++N R+ L + +S + L ++ ++PD T+ +IKGF
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G LD A Y + P + ++ +++ +C+ GD AY +CK+ K +
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQ 388
+ +++ L K ++ +A I+ L +
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVELAK 379
>sp|Q9LK58|PP225_ARATH Pentatricopeptide repeat-containing protein At3g13150
OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1
Length = 551
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 151/268 (56%)
Query: 87 VSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGC 146
+ RL A++F I+ +L++QK + E F++RIM+LYG +GM +HA F +M C
Sbjct: 94 IRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNC 153
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAY 206
+RTVKS NA L S+ L E+PEK I D+ ++N +IKA C G +D
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
+ E++K G +PD+I++ TL+ FY+ G+ +W+LM K PN+ ++N R++ L
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
++ A L+ +M+ GI PD TYN +I + +L+ K Y+ M + L P+
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
Y +I LC++GD + A + ++++K
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 11/234 (4%)
Query: 148 RTVKSLNAA-LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKA---FCEMGILD 203
R V L +A ++ L E++ I L + +KF DI S + VI+ + G+ +
Sbjct: 84 RQVHGLYSAFIRRLREAKKFSTIDEVL-QYQKKFD---DIKSEDFVIRIMLLYGYSGMAE 139
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVR 262
A+ + EM +L + V ++ L+SA+ + + + + K G P+L T+N
Sbjct: 140 HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTM 199
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I+ L K + +++ G EPD +++N +++ F R +++ M + L
Sbjct: 200 IKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNL 259
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV-PSVDTISALLEGLKKNN 375
PN + Y + + L + F A + D MK + P V T +AL+ + +N
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALITAYRVDN 312
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 166/330 (50%), Gaps = 5/330 (1%)
Query: 44 KPLEP-PALVKLKAERDPEKLFQLFKANAHNRIVIENKY-AFEDTVSRLAGARRFDYIEH 101
KP E P L LK DPE+ LF + + + + Y ++ + +LA +R FD ++
Sbjct: 45 KPWEEVPFLTDLKEIEDPEEALSLF--HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQ 102
Query: 102 LLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT 161
+L + RE M ++ YGKAG + A+D F+ + + C RT++SLN + VL
Sbjct: 103 ILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLV 162
Query: 162 ESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDV 221
++ +L+ ++F + + ++ + SFNI+IK F + + A V EM ++ V+P V
Sbjct: 163 DNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
+TY +LI +++ L M+ K PN TF + ++ L K +A KLM
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+ G +P V Y +++ + G +D AK + M RR+ P+ IY ++++LC E
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
AY + + K P+ T +++G
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A F +M + +V + N+ + L + D+ ++ L ++ +K I+ + +F +++
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK-RIRPNAVTFGLLM 263
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
K C G ++A +M +M+ G KP ++ Y L+S K R + L M +
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P++ +N+ + HL + R +A +++ MQ G +P+ TY ++I GFCR D V
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKN 356
+AML R P + M+ L + G+ + A + + KKN
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 115/259 (44%), Gaps = 1/259 (0%)
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
+ A+ F+ G + S ++ + L +SR+ A+ L V + +++ F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMG 121
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+ + + G +DKA V ++ + + TLI+ + E ++
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
PN +FN+ I+ ++K A K+ M ++P VTYN +I CR+ + AK
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M+ +R+ PN + ++ LC +G++N A + D + P + L+ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 372 KKNNQPCKANTIMALVQRR 390
K + +A ++ +++R
Sbjct: 302 GKRGRIDEAKLLLGEMKKR 320
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLL-EHQKSLPQGR-REGFIMRIMMLYGKAGMIKHAMD 136
N + + +L+ AR FD +E L+ + + S P + E + ++ YG AG + +M
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMR 141
Query: 137 TFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAF 196
F + +G KR+V+SLN L VL +++ + A E F I +IF+ N+++KA
Sbjct: 142 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL 201
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
C+ ++ AY V+ E+ +G+ P+++TYTT++ + E + M+ +G +P+
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
T+ V + R +A +M M++ IEP+EVTY ++I+ C+ A+ ++
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 317 MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
ML R MP+ + +I LC++ + A + + +K N +P +S L+ L K +
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 377 PCKA 380
+A
Sbjct: 382 VTEA 385
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 171 AFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
A +M+ EK I+ + ++ ++I+A C+ +A + EM + PD +I A
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 231 FYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPD 290
+D++ + GLW M+ C P+ A + I L + R +A KL ++ I P
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PS 399
Query: 291 EVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
+TYN +I G C G L A +++ M R+ PN Y +I L + G+ + +
Sbjct: 400 LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMAL 386
+ ++ P+ T L EGL+K + A I+++
Sbjct: 460 EMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ FGI P+ T NL++K C+ ++ A KV + L+PN Y T++ GD
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
A + ++ + + W P T + L++G K + +A T+M
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 159/336 (47%), Gaps = 7/336 (2%)
Query: 46 LEPPALVK-----LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
+ PP L K +K ++DP K ++F + + + +L +F+ +E
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 101 HLL-EHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKV 159
+L + ++++ EG + M YG+ G ++ A++ F M Y C+ TV S NA + V
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 160 LTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKP 219
L +S M + ++ I D++SF I +K+FC+ A ++ M G +
Sbjct: 121 LVDSGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
+V+ Y T++ FY++N G L+ M+ G L+TFN ++ L K + KL+
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
+ + G+ P+ TYNL I+G C+ G LD A ++ ++ + P+ Y +I+ LC+
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 340 GDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
F A + + + P T + L+ G K
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 36/223 (16%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DIF+FNI+I + ++ A ++ M GV PDV TY +L++ K ++ E +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV KGC PNL TFN+ ++ L R+ +A L+ M+ + PD VT+ +I GFC++
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 305 GHLD------------------------------------MAKKVYSAMLGRRLMPNRKI 328
G LD MA+K++ M+ R L P+
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y+ M+ C+ G+ NL Y + M+ ++PS+ T+ ++ L
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
+ F M G + + N L+VL + D+K + L +V ++ + ++F++N+
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVLPNLFTYNLF 257
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I+ C+ G LD A ++ + + G KPDVITY LI K+++ + MV +G
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P+ T+N I A +++G G PD+ TY +I G C G + A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+++ LG+ + PN +Y T+I L +G A + + +K +P V T + L+ GL
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 373 K 373
K
Sbjct: 438 K 438
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ ++ +N +IK G++ +A + EM + G+ P+V T+ L++ K +
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL +M+ KG FP++ TFN+ I + + A +++ +M G++PD TYN ++ G
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++ + + Y M+ + PN + ++ LC+ + A + ++ K+ P
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T L++G KN A T+
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTL 588
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++F+FNI++++ C LD+A ++ EM+ V PD +T+ TLI F K+ + L+
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 245 NLMV-CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M + T+N+ I K A KL M + PD TY L++ GFC+
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVD 362
+G++++ K M+ +P+ +I+ LC E A + ++K VP +V+
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Query: 363 TI 364
TI
Sbjct: 710 TI 711
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
DL ++ E + + ++NI+I AF E + A + EM + PD TY
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
++ F K +G M+ G P+L T I L + R ++A ++ M +
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 285 FGIEPDEV 292
G+ P+ V
Sbjct: 701 KGLVPEAV 708
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 2/250 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQ 183
Y + +I A+ + +G V S NA L S R++ + E+ E +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVS 202
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
++F++NI+I+ FC G +D A + +M+ G P+V+TY TLI + K + + G L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
M KG PNL ++NV I L + R + + ++ M R G DEVTYN +IKG+C+
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G+ A +++ ML L P+ Y ++IH +C+ G+ N A + P+ T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 364 ISALLEGLKK 373
+ L++G +
Sbjct: 383 YTTLVDGFSQ 392
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 20/279 (7%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G ++ A+ DM G V S + L S D+ E+ EK I+ D
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTI 486
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+++ +I+ FCE +A + EM ++G+ PD TYT LI+A+ + E L N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE--PDEVTYNLVI------- 298
V KG P++ T++V I L + R+ +A +L L++ F E P +VTY+ +I
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRL--LLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 299 --------KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCK 350
KGFC G + A +V+ +MLG+ P+ Y MIH C+ GD AY + K
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 351 DSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+ +K ++ T+ AL++ L K + + N+++ V R
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 189 FNIVIKAFCEMGILDKAYL------------------------------------VMVEM 212
F++V+K++ + ++DKA V EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 213 QKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRS 272
+ V P+V TY LI F ++ L++ M KGC PN+ T+N I R+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 273 WQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
KL+ M G+EP+ ++YN+VI G CR G + V + M R + Y T+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
I C+EG+F+ A +M + ++ PSV T ++L+ + CKA +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM------CKAGNM 361
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 4/257 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K I M L G + + S N + L +K + L E+ + +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY-SL 308
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +IK +C+ G +A ++ EM + G+ P VITYT+LI + K
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M +G PN T+ + K +A +++ M G P VTYN +I G C +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A V M + L P+ Y T++ C+ D + A + ++ ++K P T
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 365 SALLEGL---KKNNQPC 378
S+L++G ++ + C
Sbjct: 489 SSLIQGFCEQRRTKEAC 505
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++ F + G +++AY V+ EM G P V+TY LI+ + E + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P++ +++ + +A ++ M GI+PD +TY+ +I+GFC
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A +Y ML L P+ Y +I+ C EGD A + + ++K +P V T S L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 368 LEGLKKNNQPCKANTIM 384
+ GL K ++ +A ++
Sbjct: 562 INGLNKQSRTREAKRLL 578
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 86 TVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMM------------------LYGK 127
T L AR +D H+L+ + SL G+ F+ +M +Y +
Sbjct: 78 TTHILVRARMYDPARHILK-ELSLMSGKSS-FVFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
GMI+ +++ F M LYG +V + NA L + +S + ++ +FL E+ ++ I D+
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KICPDVA 194
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FNI+I C G +K+ +M +M+K G P ++TY T++ + K R + L + M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG ++ T+N+ I L R + L+ M++ I P+EVTYN +I GF G +
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
+A ++ + ML L PN + +I EG+F A M K PS + L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 368 LEGLKKNNQ 376
L+GL KN +
Sbjct: 375 LDGLCKNAE 383
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T+ + N L + KA L + K + D+ ++N++I C + K YL+
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
+ +M+K + P+ +TY TLI+ F + + I + L N M+ G PN TFN I ++
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ +A K+ +M+ G+ P EV+Y +++ G C++ D+A+ Y M + R
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y MI LC+ G + A ++ + K P + T SAL+ G K + A I+ +
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 389 R 389
R
Sbjct: 466 R 466
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 9/252 (3%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G K A+ FY M G + S L L ++ + + F M + ++ + +
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-KRNGVCVGRIT 405
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C+ G LD+A +++ EM K G+ PD++TY+ LI+ F K R + + V
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI----V 461
Query: 249 CK----GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
C+ G PN ++ I + +A ++ M G D T+N+++ C++
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + A++ M ++PN + +I+ G+ A+ + + K P+ T
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 365 SALLEGLKKNNQ 376
+LL+GL K
Sbjct: 582 GSLLKGLCKGGH 593
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D F+FN+++ + C+ G + +A M M G+ P+ +++ LI+ + ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M G P T+ ++ L +A K + + D V YN ++ C+S
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS-MKKNWVPSVDT 363
G+L A ++ M+ R ++P+ Y ++I LC++G +A + K++ + N +P+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 364 ISALLEGLKKNNQ 376
+ ++G+ K Q
Sbjct: 687 YTCFVDGMFKAGQ 699
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
++ +I C MG L +A + M G D T+ L+++ K + M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +F+ I N +A + M + G P TY ++KG C+ GHL
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+K ++ + +Y T++ +C+ G+ A + + ++++ +P T ++L+
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 369 EGLKKNNQPCKANTIMALV 387
GL + K T++A++
Sbjct: 656 SGLCR-----KGKTVIAIL 669
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+FN +I G +A + M+ G+ P ++Y L+ K+ ++ G + M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
G T+ I L +A L+ M + GI+PD VTY+ +I GFC+ G
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
AK++ + L PN IY T+I+ C+ G
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL-- 246
++I+I+ + G++ + + M G P V T ++ + K +W+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV---SVWSFLK 182
Query: 247 -MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ + P++ATFN+ I L + +++ LM M++ G P VTYN V+ +C+ G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ M + + + Y +IH LC+ Y++ +D K+ P+ T +
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 366 ALLEGLKKNNQPCKANTIM 384
L+ G + A+ ++
Sbjct: 303 TLINGFSNEGKVLIASQLL 321
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G I A D M G + +A + VL + + + L E+ ++ I +
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ-GISPESRK 896
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C +G + A++V EM + P + + ++ A K + + L M+
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
P +A+F + +A +L +M G++ D V+YN++I G C G +
Sbjct: 957 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIH-YLCQEGDFNLAYIMCKDSMKKNWVPSV 361
+A ++Y M G + N Y+ +I L +E F+ A I+ KD + + ++ S+
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSM 1070
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M LG PD++T +I + + + E N L M + PNL T+N+ + H +KR
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI-LLHGYSKR 767
Query: 271 RSWQANKLM-GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ + L+ + GI PD++T + ++ G C S L++ K+ A + R + +R +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+I C G+ N A+ + K DT A++ L +N++
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 874
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++NI++ + + + ++L+ + G+ PD +T +L+ + N EIG +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 245 NLMVCKGCFPNLATFNVRIQHL-VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+C+G + TFN+ I N +W A L+ +M GI D+ T + ++ R
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINW-AFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
+ ++ V M + + P + Y +I+ LC+ GD A+++ ++ + P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 364 ISALLEGLKKNNQPCKANTIM--ALVQRRVPHFSS 396
SA++ L K + +A ++ L + VP +S
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y LI + ++ + ++ LM G P++ T N + +V + M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ I PD T+N++I C G + + + M P Y T++H+ C++G F
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 344 LAYIMCKDSMKKNWVPS-VDTISALLEGLKKNNQPCKANTIMALVQRRVPH 393
A I D MK V + V T + L+ L ++N+ K ++ +++R+ H
Sbjct: 246 AA-IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 45/226 (19%)
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
LK ++AF+ ++ D ++FN++I C G ++ A+ ++ M LG+ D T
Sbjct: 809 LKILKAFICR-----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
++S +++R + ++ ++ M +
Sbjct: 864 AMVSVLNRNHRFQ-----------------------------------ESRMVLHEMSKQ 888
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
GI P+ Y +I G CR G + A V M+ ++ P M+ L + G + A
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRRV 391
++ + +K VP++ + + L+ KN N I AL R V
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKN-----GNVIEALELRVV 989
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANA--HNRIVIENKYAFEDTVSRLAGARRFDYIE 100
K + P ++KL +AE+D EK +F + + + ++ +F V RL A +F E
Sbjct: 12 KNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAE 71
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVL 160
L+ K E ++ I YG+ ++ F+ M + C + K+ L +L
Sbjct: 72 DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 131
Query: 161 TESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM-GILDKAYLVMVEMQKLGVKP 219
E L F + E + + S N++IKA C G +D + +EM K G P
Sbjct: 132 VEENQLNLAFKFYKNMRE-IGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190
Query: 220 DVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLM 279
D TY TLIS + R + L+ MV K C P + T+ I L + +A + +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 280 GLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
M+ GIEP+ TY+ ++ G C+ G A +++ M+ R PN Y T+I LC+E
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M+ P Y T+++ ++N+ + + M G P +A+ NV I+ L
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 271 RSWQAN-KLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A K+ M + G +PD TY +I G CR G +D AKK+++ M+ + P Y
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++I+ LC + + A ++ K P+V T S+L++GL K+ + +A + ++
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 390 R 390
R
Sbjct: 291 R 291
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 119/219 (54%), Gaps = 1/219 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G K + + N + + L ++ ++ I ++
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNV 333
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+++I +F + G L +A ++ EM + G+ P+ ITY +LI F K+NR E + +L
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ KGC P++ TFN+ I R +L M G+ + VTYN +++GFC+SG
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
L++AKK++ M+ RR+ P+ Y+ ++ LC G+ A
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 108/205 (52%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I FC G D ++ +M K + P+V+T++ LI +F K+ + + L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ +G PN T+N I + R +A +++ LM G +PD +T+N++I G+C++
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D +++ M R ++ N Y T++ CQ G +A + ++ + + P + +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +++
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEK 501
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 1/238 (0%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIV 192
A+D F DM TV N + +++ + + A ++ K I I++ +I+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK-GIAHSIYTLSIM 129
Query: 193 IKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGC 252
I FC L A+ M ++ KLG +PD + + TL++ + R L + MV G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P L T N + L + A L+ M G +P+EVTY V+ C+SG +A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ M R + + Y +I LC++G + A+ + + K + + T + L+ G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I FC+ L++A ++ M G PD++T+ LI+ + K NR + G L+
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G N T+N +Q + A KL M + PD V+Y +++ G C +G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
L+ A +++ + ++ + IY +IH +C + A+
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 21/242 (8%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +FNI+I +C+ +D + EM GV + +TY TL+ F + + E+ L+
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + P++ ++ + + L + +A ++ G +++ +E D Y ++I G C +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP----- 359
+D A ++ ++ + + + + Y MI LC++ + A I+ + ++ P
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 360 -----------SVDTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLS-AFKSILS 407
T + L+E +K + P +T+ ++ SS +L +F +LS
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN----MLSSGELDKSFLDMLS 637
Query: 408 KS 409
+
Sbjct: 638 TT 639
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ V+ C+ G A ++ +M++ +K D + Y+ +I KD + L+N M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG ++ T+N I N R KL+ M + I P+ VT++++I F + G L
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ M+ R + PN Y ++I C+E A M + K P + T + L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 368 LEGLKKNNQPCKANTI 383
+ G CKAN I
Sbjct: 410 INGY------CKANRI 419
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + N ++ C G + A +++ M + G +P+ +TY +++ K + + L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M + + +++ I L A L M+ G + D +TYN +I GFC +G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
D K+ M+ R++ PN + +I +EG A + K+ M++ P+ T +
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 366 ALLEGLKKNNQ 376
+L++G K N+
Sbjct: 373 SLIDGFCKENR 383
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VI + L SA K + E+ L M KG ++ T ++ I R+ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MG + + G EPD V +N ++ G C + A ++ M+ P T+++ LC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G + A ++ ++ + P+ T +L + K+ Q A ++ ++ R
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G ++ A F +M + + S L L ++ +L KA++ F EK ++
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF--GKIEKSKME 505
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
DI + I+I C +D A+ + + GVK D Y +IS + + + L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ M +G P+ T+N+ I+ + + A +L+ M+ G D T +VI
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN-MLS 624
Query: 304 SGHLD 308
SG LD
Sbjct: 625 SGELD 629
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 138 FYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFC 197
+ DM L G + N ++ L +S + A + E+PEK + + F+F I+++ +C
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYC 193
Query: 198 EMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLA 257
+ G+ DK ++ M+ GV P+ + Y T++S+F ++ R + + M +G P++
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 258 TFNVRIQHLVNKRRSWQANKL---MGLMQRFGI-EPDEVTYNLVIKGFCRSGHLDMAKKV 313
TFN RI L + + A+++ M L + G+ P+ +TYNL++KGFC+ G L+ AK +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ ++ + + + Y + L + G F A + K K PS+ + + L++GL K
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 374 NNQPCKANTIMALVQR 389
A TI+ L++R
Sbjct: 374 LGMLSDAKTIVGLMKR 389
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 24/300 (8%)
Query: 90 LAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCK 147
L +R F +E L+ LP R I +ML G K G+++ A F +
Sbjct: 269 LDASRIFSDME--LDEYLGLP---RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 148 RTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYL 207
+++S N L+ L + L ++ +K I I+S+NI++ C++G+L A
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 208 VMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLV 267
++ M++ GV PD +TY L+ + + + L M+ C PN T N+ + L
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 268 NKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R +A +L+ M G D VT N+++ G C SG LD A ++ M
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM---------- 492
Query: 328 IYQTMIHYLCQEGDFNLAYI-MCKDSM-KKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+H G+ +YI + DS+ + N +P + T S LL GL K + +A + A
Sbjct: 493 ----RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 2/196 (1%)
Query: 192 VIKAFCEMGILDKAY--LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
V+ F + +DKA+ +V + KP V Y L+ + K+ R E + L+ MV
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
G P TFN+ I+ L + A +L M G +P+E T+ ++++G+C++G D
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
++ +AM ++PN+ IY T++ C+EG + + M + ++ VP + T ++ +
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 370 GLKKNNQPCKANTIMA 385
L K + A+ I +
Sbjct: 261 ALCKEGKVLDASRIFS 276
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+Q D ++NI I FC+ G + A+ V+ +M+K G + TY +LI N+ +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL + M KG PN+ T+N IQ+L + A L+ M + I P+ ++ +I+ F
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 302 CRSGHLDMAKKVYSA 316
C+ DMA++V+
Sbjct: 675 CKVPDFDMAQEVFET 689
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++ ++ C+ G +A + EM ++PD + Y I F K + +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M KGC +L T+N I L K + ++ + LM M+ GI P+ TYN I+ C
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
++ A + M+ + + PN ++ +I C+ DF++A
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 24/272 (8%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y G + A +M C + N L L + + + L ++ EK +
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY-GL 464
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-----------------------PDV 221
D + NI++ C G LDKA ++ M+ G PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
ITY+TL++ K R L+ M+ + P+ +N+ I H + + A +++
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M++ G TYN +I G + + M + + PN Y T I YLC+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
A + + M+KN P+V + L+E K
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G I A DM GC +++++ N+ + L + I + E+ EK I
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK-GISP 627
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N I+ CE ++ A ++ EM + + P+V ++ LI AF K ++ ++
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
V C +++ L+ + +A +L+ + G E Y +++ C+
Sbjct: 688 ETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 305 GHLDMAKKVYSAMLGR 320
L++A + M+ R
Sbjct: 747 DELEVASGILHKMIDR 762
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A + F +M + G + + N + + L ++ ++ I ++
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNV 333
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+F+++I +F + G L +A + EM G+ PD ITYT+LI F K+N + N + +L
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV KGC PN+ TFN+ I R +L M G+ D VTYN +I+GFC G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
L++AK+++ M+ R++ PN Y+ ++ LC G+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 36/297 (12%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
+G AM M YGC+ + L V+ +S L ++ E+ +I+ D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAV 264
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++I+I C+ G LD A+ + EM+ G+ ++ITY LI F R + G L M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ + PN+ TF+V I V + + +A +L M GI PD +TY +I GFC+ HL
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 308 DMAKKVYSAMLGRRLMPN------------------------RKI-----------YQTM 332
D A ++ M+ + PN RK+ Y T+
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
I C+ G N+A + ++ + + P++ T LL+GL N + KA I +++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + + +F+ +I C G + +A ++ M ++G KPD+IT TL++ +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV GC PN T+ + + ++ A +L+ M+ I+ D V Y+++I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ G LD A +++ M + + N Y +I C G ++ + +D +K+
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 359 PSVDTISALLEGLKKNNQ 376
P+V T S L++ K +
Sbjct: 331 PNVVTFSVLIDSFVKEGK 348
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A+D F DM TV + + +++ + A ++ K I ++++ +I+I
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK-GIAHNLYTLSIMI 130
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC L A+ M ++ KLG +P+ IT++TLI+ + R L + MV G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+L T N + L + +A L+ M +G +P+ VTY V+ C+SG +A ++
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
M R + + Y +I LC+ G + A+ + + K ++ T + L+ G
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +FNI+I +C+ +D + +M GV D +TY TLI F + + + L+
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV + PN+ T+ + + L + S +A ++ +++ +E D YN++I G C +
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P K Y MI LC++G + A ++ + + P T
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
+ L+ + K+ ++ ++R
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKR 606
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + N ++ C G +A L++ +M + G +P+ +TY +++ K + + L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + + +++ I L A L M+ GI + +TYN++I GFC +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+ R++ PN + +I +EG A + K+ + + P T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L++G K N KAN ++ L+
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLM 394
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P VI ++ L SA K + ++ L M KG NL T ++ I R+ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
MG + + G EP+ +T++ +I G C G + A ++ M+ P+ T+++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
G A ++ ++ P+ T +L + K+ Q A ++ ++ R
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 3/189 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KA I ++ F M L G + N ++ E L + E+ + +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPP 471
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++ I++ C+ G +KA + +++K ++ D+ Y +I ++ + L+
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG P + T+N+ I L K +A L M+ G PD TYN++I+
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 305 GHLDMAKKV 313
G D K V
Sbjct: 592 G--DATKSV 598
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M+ G+ ++ T + +I+ F + + + ++ G PN TF+ I L +
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A +L+ M G +PD +T N ++ G C SG A + M+ PN Y
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+++ +C+ G LA + + ++N S +++GL K+
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F E EK ++ DI +NI+I C +D A+ + + GVKP V TY
Sbjct: 491 KALEIF--EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I K L+ M G P+ T+N+ I+ + + ++ KL+ ++R G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 287 IEPDEVTYNLVI----KGFCRSGHLDM 309
D T +VI G + LDM
Sbjct: 609 FSVDASTIKMVIDMLSDGRLKKSFLDM 635
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 81 YAFEDTVSRLAGARRFDYIEHLLEHQKSLP-QGRREGFIMRIMMLYGKAGMIKHAMDTFY 139
+ + + + R+FD HL++ KS + E F + ++ Y +AG+ A+ F
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI-LIRRYVRAGLASEAVHCFN 210
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
M YGC + + + L+ R Q+F + ++F + D+ + +++ +C
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRA 268
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G + +A V EM+ G++P+V TY+ +I A + + + ++ M+ GC PN TF
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N ++ V R+ + ++ M++ G EPD +TYN +I+ CR +L+ A KV + M+
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
++ N + T+ Y+ ++ D N A+ M M+ P+ T + L+
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 7/303 (2%)
Query: 77 IENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHA 134
+ +K AF +S L+ RR + + SL I+ ++ G +AG I A
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFD---SLKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 135 MDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
F +M L G + V + + + L + ++ + + +FN +++
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS-GCAPNAITFNNLMR 333
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
+ G +K V +M+KLG +PD ITY LI A +D E + N M+ K C
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 255 NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVY 314
N +TFN +++ KR A+++ M EP+ VTYN++++ F S DM K+
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 315 SAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISALLEGLKK 373
M + + PN Y+ ++ C G +N AY + K+ + +K PS+ +L L++
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 374 NNQ 376
Q
Sbjct: 514 AGQ 516
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 7/294 (2%)
Query: 82 AFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM 141
++ + +L F I+ LL K +E + IM Y KAG +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 142 -HLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
++Y C+ T KS N L++L K ++ + I +F+F +V+KAFC +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVN 231
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+D A ++ +M K G P+ + Y TLI + K NR L M GC P+ TFN
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L R +A K++ M G PD++TY ++ G C+ G +D AK ++ R
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY----R 347
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTISALLEGLKK 373
P I+ T+IH G + A + D + VP V T ++L+ G K
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 77/294 (26%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y K G++ A++ +DM GCK V
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNV---------------------------------- 424
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-------- 236
+S+ I++ FC++G +D+AY V+ EM G+KP+ + + LISAF K++R
Sbjct: 425 --YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 237 -------------------------PEIGNGLWNL--MVCKGCFPNLATFNVRIQHLVNK 269
EI + LW L M+ +G N T+N I + +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A KL+ M G DE+TYN +IKG CR+G +D A+ ++ ML P+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+I+ LC+ G A K+ + + P + T ++L+ GL C+A I
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL------CRAGRI 650
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 7/274 (2%)
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAI 169
P G++M + K G + A D FY + K + N + L
Sbjct: 320 PDDITYGYLMNGLC---KIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDA 372
Query: 170 QAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLIS 229
+A L ++ + I D+ ++N +I + + G++ A V+ +M+ G KP+V +YT L+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K + + + N M G PN FN I + R +A ++ M R G +P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D T+N +I G C + A + M+ ++ N Y T+I+ + G+ A +
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + T ++L++GL + + KA ++
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 274 QANKLMGLMQR-FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTM 332
Q +LM M+ + EP +YN+V++ +A V+ ML R++ P + +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 333 IHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ C + + A + +D K VP+ L+ L K N+
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 159/354 (44%), Gaps = 21/354 (5%)
Query: 41 LVDKPLEPPALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIE 100
+V+ PLE P EK+F+ ++ + A + FD +E
Sbjct: 50 VVENPLEAPI---------SEKMFKSAPKMGSFKL---GDSTLSSMIESYANSGDFDSVE 97
Query: 101 HLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKV 159
LL + + E + + YGKA + A+D F+ M + CKR+VKS N+ L V
Sbjct: 98 KLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNV 157
Query: 160 LTES----RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL 215
+ R L+ +++ +I + SFN+VIKA C++ +D+A V M +
Sbjct: 158 IINEGLYHRGLE-FYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER 216
Query: 216 GVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA 275
PD TY TL+ K+ R + L + M +GC P+ +NV I L K +
Sbjct: 217 KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 276
Query: 276 NKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
KL+ M G P+EVTYN +I G C G LD A + M+ + +PN Y T+I+
Sbjct: 277 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
Query: 336 LCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
L ++ A + ++ + + S L+ GL K KA M+L ++
Sbjct: 337 LVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG---KAEEAMSLWRK 387
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I +++++ C G ++A ++ M G P+ TY++L+ F+K E +W
Sbjct: 396 NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVW 455
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M GC N ++V I L R +A + M GI+PD V Y+ +IKG C
Sbjct: 456 KEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGI 515
Query: 305 GHLDMAKKVYSAMLGR---RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G +D A K+Y ML + + P+ Y ++ LC + D + A + + + P V
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Query: 362 DTISALLEGLKKNNQPC 378
T + L L + + C
Sbjct: 576 ITCNTFLNTLSEKSNSC 592
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 9/324 (2%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
AL KL R ++ ++F+ R + + Y + + L R D LL+ +S
Sbjct: 196 ALCKL---RFVDRAIEVFRGMPE-RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS- 250
Query: 110 PQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+G ++ +++ G K G + +M L GC + N + L L
Sbjct: 251 -EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
+ L + I D+ ++ +I + A ++ M++ G + Y+ L
Sbjct: 310 KAVSLLERMVSSKCIPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
IS +K+ + E LW M KGC PN+ ++V + L + + +A +++ M G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ TY+ ++KGF ++G + A +V+ M N+ Y +I LC G A +
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 348 MCKDSMKKNWVPSVDTISALLEGL 371
+ + P S++++GL
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F ++++I C +G + +A +V +M +G+KPD + Y+++I + L++
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 247 MVCK---GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF-- 301
M+C+ P++ T+N+ + L ++ +A L+ M G +PD +T N +
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Query: 302 ----CRSGH---------------LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
C G + A + MLG+ L P + ++ +C+
Sbjct: 588 KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Query: 343 NLAYIMC 349
N A C
Sbjct: 648 NAAIDKC 654
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV--PEKFHIQFD 185
G +K AM + M G K + ++ +K L + A E+ E+ Q D
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY-KDNRPEIGNGLW 244
+ ++NI++ C + +A ++ M G PDVIT T ++ K N + G
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+V + L+ ++R A ++ +M + P T+ ++++ C+
Sbjct: 600 EELVVR---------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKP 644
Query: 305 GHLDMA 310
++ A
Sbjct: 645 KKINAA 650
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 1/263 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K+G A+D F M K +V + + L + + E+ K I+ D+
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADV 280
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+++ +I C G D ++ EM + PDV+T++ LI F K+ + L+N
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ +G P+ T+N I + +AN++ LM G EPD VTY+++I +C++
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D +++ + + L+PN Y T++ CQ G N A + ++ + + PSV T
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 367 LLEGLKKNNQPCKANTIMALVQR 389
LL+GL N + KA I +Q+
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQK 483
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+++ I+I +C L A+ V+ KLG +PD IT++TL++ F + R
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV P+L T + I L K R +A L+ M +G +PDEVTY V+
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C+SG+ +A ++ M R + + Y +I LC++G F+ A + + K V
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 362 DTISALLEGL 371
T S+L+ GL
Sbjct: 281 VTYSSLIGGL 290
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++N +I FC+ L +A + M G +PD++TY+ LI+++ K R + G L+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG PN T+N + + A +L M G+ P VTY +++ G C +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A +++ M R+ IY +IH +C + A+ + K P V T
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 365 SALLEGLKKNNQPCKANTI 383
+ ++ GL K +A+ +
Sbjct: 529 NVMIGGLCKKGSLSEADML 547
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + D +F+ ++ FC G + +A ++ M ++ +PD++T +TLI+ R
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV G P+ T+ + L S A L M+ I+ V Y++VI
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C+ G D A +++ M + + + Y ++I LC +G ++ M ++ + +N +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P V T SAL++ K + +A
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEA 334
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +++I+I ++C+ +D + E+ G+ P+ ITY TL+ F + + L+
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV +G P++ T+ + + L + +A ++ MQ+ + YN++I G C +
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+D A ++ ++ + + P+ Y MI LC++G + A ++ + + P T
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 365 SALL 368
+ L+
Sbjct: 564 NILI 567
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + + +I C G + +A +++ M + G +PD +TY +++ K + L+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + ++ +++ I L A L M+ GI+ D VTY+ +I G C
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G D K+ M+GR ++P+ + +I +EG A + + + + P T
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 365 SALLEGLKKNNQPCKANTIMALV 387
++L++G K N +AN + L+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLM 376
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
++ Q D ++ V+ C+ G A + +M++ +K V+ Y+ +I + KD +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L+N M KG ++ T++ I L N + K++ M I PD VT++ +I
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
F + G L AK++Y+ M+ R + P+ Y ++I C+E + A M + K
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P + T S L+ N CKA +
Sbjct: 383 PDIVTYSILI------NSYCKAKRV 401
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 133 HAMDTFYDMHLY-GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNI 191
H + +D+ + GC+ + + + + +++ + E+ K I + ++N
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP-NTITYNT 425
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ FC+ G L+ A + EM GV P V+TY L+ + ++ M
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
+ +N+ I + N + A L + G++PD VTYN++I G C+ G L A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 312 KVYSAMLGRRLMPNRKIYQTMIH 334
++ M P+ Y +I
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIR 568
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P I + L SA + + ++ G M G ++ T + I K++ A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G + G EPD +T++ ++ GFC G + A + M+ + P+ T+I+ LC
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA-NTIMAL 386
+G + A ++ ++ + P T +L N+ CK+ N+ +AL
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVL------NRLCKSGNSALAL 230
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA 230
D+ ++N++I C+ G L +A ++ +M++ G PD TY LI A
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 38/381 (9%)
Query: 44 KPLEPPALVKL-KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHL 102
K L P ++KL K+E++P F LF + + + + + RL+ R +++ +
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 103 LEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDM-HLYGCKRTVKSLNAALKVLT 161
+E +S E + ++ YGK M A+D F M ++GC+ ++S N L
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 162 ESRDLKAIQAF----------------------------------LMEVPEKFHIQFDIF 187
E++ +++ ++ K + D+F
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN-L 246
S++ VI + G LD A + EM + GV PDV Y LI F K+ + LW+ L
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+ +PN+ T N+ I L R K+ M++ E D TY+ +I G C +G+
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+D A+ V++ + R+ + Y TM+ C+ G + + + KN V V + +
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV-SYNI 364
Query: 367 LLEGLKKNNQPCKANTIMALV 387
L++GL +N + +A I L+
Sbjct: 365 LIKGLLENGKIDEATMIWRLM 385
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+M+ E D++++ +I C+ L++A ++ EM K GV+ + LI
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+D+R + M GC P + ++N+ I L + +A+ + M G +PD
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY++++ G CR +D+A +++ L L + ++ +IH LC G + A + +
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+N ++ T + L+EG K +A I + +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 2/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ + G IK +++ + M + + S N +K L E+ + +P K +
Sbjct: 335 FCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA- 392
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++ I I C G ++KA VM E++ G DV Y ++I K R E + L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G N N I L+ R +A+ + M + G P V+YN++I G C++
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A ML P+ K Y ++ LC++ +LA + ++ V
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ L+ GL + A T+MA ++ R
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHR 598
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A + +M +G + NA + L L FL E+ K + + S+N
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG-KNGCRPTVVSYN 503
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I C+ G +A + EM + G KPD+ TY+ L+ +D + ++ LW+ +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G ++ N+ I L + + A +M M+ + VTYN +++GF + G + A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ M L P+ Y T++ LC + A D+ P+V T + L+
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Query: 371 L 371
+
Sbjct: 684 V 684
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 139/344 (40%), Gaps = 26/344 (7%)
Query: 20 DAIALNNIRAVSLNKFPNREPLVDKPLEP-----PALVKLKAERDPEKLFQLFKANAHNR 74
+ +AL+ I+ N P++ V K + PA+ R L F A
Sbjct: 78 EDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAI------RSYNTLLNAF-VEAKQW 130
Query: 75 IVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-------REGF------IMRI 121
+ +E+ +A+ +T + ++ + + +K + R +EGF +
Sbjct: 131 VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTV 190
Query: 122 MMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH 181
+ KAG + A++ F +M G V N + + +D K + E
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSS 250
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
+ ++ + NI+I + G +D + M++ + D+ TY++LI +
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
++N + + ++ T+N + + ++ +L +M+ + V+YN++IKG
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGL 369
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
+G +D A ++ M + ++ Y IH LC G N A
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 42/181 (23%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQ 183
KAG A +M G K +K+ + L L R + +E+ +F ++
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID----LALELWHQFLQSGLE 566
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ NI+I C +G LD A VM M+ +++TY TL+ F+K +
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 244 WNLM--------------------VCKGC---------------FPNLATFNVRIQHLVN 268
W M +C+G FP + T+N+ ++ +VN
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Query: 269 K 269
+
Sbjct: 687 R 687
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 143/278 (51%), Gaps = 10/278 (3%)
Query: 109 LPQGRRE-GFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRD 165
+ QG+ E G ++ ++ G K + A++ F +M G + V + ++ + L
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 166 LKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT 225
L ++ E+ I D+F+F+ +I AF + G L +A + EM K + P ++TY+
Sbjct: 307 WSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 226 TLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF 285
+LI+ F +R + ++ MV K CFP++ T+N I+ +R + ++ M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 286 GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLA 345
G+ + VTYN++I+G ++G DMA++++ M+ + PN Y T++ LC+ G A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 346 YIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
++ + + P++ T + ++EG+ CKA +
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGM------CKAGKV 517
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%)
Query: 178 EKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP 237
E I+ ++ +++ +I C G A ++ +M + + PDV T++ LI AF K+ +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L++ MV + P++ T++ I R +A ++ M PD VTYN +
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
IKGFC+ ++ +V+ M R L+ N Y +I L Q GD ++A + K+ +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
P++ T + LL+GL KN + KA + +QR
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I + ++++I+I FC L A V+ +M KLG +P+++T ++L++ +
Sbjct: 103 LGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYC 162
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + M G PN TFN I L ++ +A L+ M G +PD V
Sbjct: 163 HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV 222
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G D+A + + M +L P IY T+I LC+ + A + K+
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + +I + + ++ +C + +A ++ +M G +P+ +T+ TLI + N+
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV KGC P+L T+ V + L + + A L+ M++ +EP + YN +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A ++ M + + PN Y ++I LC G ++ A + D +++
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 359 PSVDTISALLEGLKKNNQPCKANTIM-ALVQRRV 391
P V T SAL++ K + +A + +V+R +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ +V+ C+ G D A+ ++ +M++ ++P V+ Y T+I K +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I PD T++ +I F
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P V
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 363 TISALLEGLKK 373
T + L++G K
Sbjct: 398 TYNTLIKGFCK 408
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ +++ V EM + G+ + +TY LI ++ ++ ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +QR +EP TYN++I+G C++
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ + + + P+ Y TMI C++G A + K+ + +P+
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 575 NTLIRARLRDGDREASAELI 594
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I I +++ +I FC LD+A + M PDV+TY TLI F K R E
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G ++ M +G N T+N+ IQ L A ++ M G+ P+ +TYN ++
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L+ A V+ + ++ P Y MI +C+ G + + C S+ K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGV 532
Query: 358 VPSVDTISALLEGLKKNNQPCKANTI 383
P V + ++ G + +A+ +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 12/238 (5%)
Query: 79 NKYAFEDTVSR---LAGARRFDYIEHLLEHQKSLPQ----GRREGFIMRIMMLYGKAGMI 131
+K+ F D V+ + G ++ +E +E + + Q G + + I L+ +AG
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAGDC 447
Query: 132 KHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFN 190
A + F +M G + + N L L ++ L KA+ F E ++ ++ I+++N
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF--EYLQRSKMEPTIYTYN 505
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I+I+ C+ G ++ + + + GVKPDV+ Y T+IS F + E + L+ M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN +N I+ + + +L+ M+ G D T LV G LD
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 622
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 1/289 (0%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S +A +FD + L E ++L ++ + + + A+ M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + +L++ L S+ + A + ++ + Q + +FN +I
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY-QPNTVTFNTLIHGLFLHNKA 202
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
+A ++ M G +PD++TY +++ K ++ L N M P + +N
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I L + A L M+ GI P+ VTY+ +I C G A ++ S M+ R++
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ + +I +EG A + + +K++ PS+ T S+L+ G
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ M+ F +M G + N ++ L ++ D Q E+ + +I ++N
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYN 470
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L+ + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P++ +N I K +A+ L M+ G P+ YN +I+ R G + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 311 KKVYSAM 317
++ M
Sbjct: 591 AELIKEM 597
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + EM K P +I ++ L+SA K N+ ++ L M G N T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++G M + G EP+ VT + ++ G+C S + A + M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
PN + T+IH L + A + + K P + T ++ GL K
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAG +K A M GC V + + L + DL + L E+ K +Q
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQP 489
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+IF++N ++ C+ G +++A ++ E + G+ D +TYTTL+ A+ K + +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ KG P + TFNV + KL+ M GI P+ T+N ++K +C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+L A +Y M R + P+ K Y+ ++ C+ + A+ + ++ K + SV T
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
S L++G K + +A + ++R
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 165 DLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITY 224
D++A F E+ + I D+ ++ +I FC++G + +A + EM G++PD +T+
Sbjct: 366 DIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 225 TTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQR 284
T LI+ + K + + N M+ GC PN+ T+ I L + AN+L+ M +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 285 FGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNL 344
G++P+ TYN ++ G C+SG+++ A K+ L + Y T++ C+ G+ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 345 AYIMCKDSMKKNWVPSVDTISALLEGL 371
A + K+ + K P++ T + L+ G
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 25/299 (8%)
Query: 99 IEHLLEHQKSLPQGRREGFIMRIMML------YGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
I L E +++ + R+G + ++ + K G I+ A FY+MH V +
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFHIQF------DIFSFNIVIKAFCEMGILDKAY 206
A + + D+ +E + FH F D +F +I +C+ G + A+
Sbjct: 389 YTAIISGFCQIGDM-------VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 207 LVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL 266
V M + G P+V+TYTTLI K+ + N L + M G PN+ T+N + L
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 267 VNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNR 326
+A KL+G + G+ D VTY ++ +C+SG +D A+++ MLG+ L P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 327 KIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+ +++ C G + + K P+ T ++L++ Q C N + A
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK------QYCIRNNLKA 614
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 129 GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFS 188
G IK A M L G V S + + +L + L+EV ++ ++ + +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK-LIEVMKRKGLKPNSYI 318
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
+ +I C + L +A EM + G+ PD + YTTLI F K + + M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
+ P++ T+ I +A KL M G+EPD VT+ +I G+C++GH+
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A +V++ M+ PN Y T+I LC+EGD + A + + K P++ T ++++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 369 EGLKKNNQPCKANTIMALVQRRVPHFSSNQLSA 401
GL CK+ I V + V F + L+A
Sbjct: 499 NGL------CKSGNIEEAV-KLVGEFEAAGLNA 524
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 43/256 (16%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFL--------MEVPEKFHIQFDIFS------------F 189
++SL + + S+DLK Q+ + + V + F FD+ F
Sbjct: 119 LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVF 178
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD------------NRP 237
++ + + G+L +A V +M G+ V + ++ KD P
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 238
Query: 238 EIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
E+G VC N+A++N+ I + R +A+ L+ LM+ G PD ++Y+ V
Sbjct: 239 EVG-------VCW----NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
+ G+CR G LD K+ M + L PN IY ++I LC+ A + +++
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 358 VPSVDTISALLEGLKK 373
+P + L++G K
Sbjct: 348 LPDTVVYTTLIDGFCK 363
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A + ++M G + + + N+ + L +S +++ + E E + D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADT 526
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++ ++ A+C+ G +DKA ++ EM G++P ++T+ L++ F E G L N
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE--------------- 291
M+ KG PN TFN ++ + A + M G+ PD
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 292 --------------------VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
TY+++IKGF + A++V+ M L +++I+
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+M Y K+G + A + +M G + T+ + N + L+ + L + K
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK- 590
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
I + +FN ++K +C L A + +M GV PD TY L+ K +
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
L+ M KG +++T++V I+ + +++ +A ++ M+R G+ D+ ++
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + N+ ++ L L ++ E+ I ++ +F+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 329
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T+N I+ +R + +L M + G+ + VTYN +I+G ++G DMA
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+K++ M+ + P+ Y ++ LC+ G A ++ + K P + T + ++EG
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 510 M------CKAGKV 516
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I +D++S+NI+I FC L A V+ +M KLG +PD++T ++L++ +
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + M PN TFN I L ++ +A L+ M G +PD
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY V+ G C+ G +D+A + M ++ + IY T+I LC + N A + +
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T ++L+ L + A+ +++ +++R++
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L ++ EK I+ D+ + +I A C ++
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G++P+V+TY +LI R + L + M+ + PN+ TF+ I
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ + P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
N Y T+I C+ + ++ ++ V + T + L++GL
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+F++ V+ C+ G +D A ++ +M+K ++ DV+ YTT+I A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T+N I+ L N R A++L+ M I P+ VT++ +I F
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L++G CKA +
Sbjct: 397 TYNTLIKGF------CKAKRV 411
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 14/239 (5%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K++N AL + TE D K I+ ++ ++N +I+ C G A ++
Sbjct: 269 KNVNDALNLFTE-MDNKGIRP-------------NVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + + P+V+T++ LI AF K+ + L++ M+ + P++ T++ I
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A + LM P+ VTYN +IKGFC++ ++ +++ M R L+ N Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+I L Q GD ++A + K + P + T S LL+GL K + KA + +Q+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK FC+ +++ + EM + G+ + +TY TLI ++ ++ ++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L + +A + +Q+ +EPD TYN++I+G C++
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ ++ + + PN IY TMI C++G A + ++ + +P+ T
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 574 NTLIRARLRDGDKAASAELI 593
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 146 CKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKA 205
C V + N +K +++ ++ E+ ++ + + ++N +I+ + G D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMA 449
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +M GV PD+ITY+ L+ K + E ++ + P++ T+N+ I+
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
+ + L + G++P+ + Y +I GFCR G + A ++ M +PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
Y T+I ++GD + + K+ +V TIS ++ L
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + +A+ F M YG + V + + L S + + L + ++ I+ D+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDV 247
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I AF + G A + EM ++ + P++ TYT+LI+ F + + ++ L
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M KGCFP++ + I ++ A K+ M + G+ + +TY +I+GF + G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW---VPSVDT 363
++A++V+S M+ R + PN + Y ++H LC G A ++ +D K+ P++ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 364 ISALLEGLKKNNQPCKANTIMALVQRR 390
+ LL GL N + KA + +++R
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
+ + G + + N + +S +FL ++ K + DI +F +I FC
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM-MKLGFEPDIVTFTSLINGFCLGN 156
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+++A ++ +M ++G+KPDV+ YTT+I + K+ L++ M G P++ +
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L N R A+ L+ M + I+PD +T+N +I F + G A+++Y+ M+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ PN Y ++I+ C EG + A M K P V ++L+ G K
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 21/240 (8%)
Query: 153 LNAALKVLT---ESRDLKAIQAF--LMEVPEKF-----------HIQF-----DIFSFNI 191
N AL + T ESR L +I F L+ V K H+Q D+++ N+
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
++ FC+ A + +M KLG +PD++T+T+LI+ F NR E + N MV G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAK 311
P++ + I L A L M+ +GI PD V Y ++ G C SG A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 312 KVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ M R++ P+ + +I +EG F A + + ++ + P++ T ++L+ G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I+ D+ + +I + C+ G ++ A + +M+ G++PDV+ YT+L++ R +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L M + P++ TFN I V + + A +L M R I P+ TY +I GF
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C G +D A++++ M + P+ Y ++I+ C+ + A + + +K +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 362 DTISALLEGLKKNNQPCKANTIMA-LVQRRVP 392
T + L++G + +P A + + +V R VP
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
+LME F D+ ++ +I FC+ +D A + EM + G+ + ITYTTLI F
Sbjct: 306 YLMETKGCFP---DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRF---GIE 288
+ +P + +++ MV +G PN+ T+NV + L + +A + MQ+ G+
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF-NLAYI 347
P+ TYN+++ G C +G L+ A V+ M R + Y +I +C+ G N +
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 348 MC---KDSMKKNWVPSVDTISALL-EGLK 372
C +K N V IS L EGLK
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLK 511
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F ++ +M D + +Q +GV D+ T L++ F + ++P + +
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ TF I R +A ++ M GI+PD V Y +I C++G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H++ A ++ M + P+ +Y ++++ LC G + A + + K+ P V T +
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 366 ALLEGLKKNNQ 376
AL++ K +
Sbjct: 252 ALIDAFVKEGK 262
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
MVE + L P +I +T L++ K + ++ L + + G +L T N+ +
Sbjct: 63 MVESRPL---PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQ 119
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + A+ +G M + G EPD VT+ +I GFC ++ A + + M+ + P+ +
Sbjct: 120 SSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQ 388
Y T+I LC+ G N A + P V ++L+ GL + + A++++ +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 389 RR 390
+R
Sbjct: 240 KR 241
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 37/147 (25%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFL-MEVPEKFHI 182
+G+ G A + F M G +++ N L L + + KA+ F M+ E +
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKL--------------------------- 215
+I+++N+++ C G L+KA +V +M+K
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 216 --------GVKPDVITYTTLISAFYKD 234
GVKP+V+TYTT+IS +++
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFRE 508
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 38 REPLVDKPLEP---PALVK--LKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAG 92
R+P+V P P P V+ + ++ DP ++F + ++ + + +L
Sbjct: 37 RKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGR 96
Query: 93 ARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKS 152
R F+ I+ +L +S ++ +Y +A + + + TFY M + K
Sbjct: 97 GRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 153 LNAALKVLTESRDLKAIQAFLMEVPEKFH-IQFDIFSFNIVIKAFCEMGILDKAYLVMVE 211
LN L VL R +AF + + H + + S+N++++AFC L AY + +
Sbjct: 157 LNRILDVLVSHRGYLQ-KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 212 MQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRR 271
M + V PDV +Y LI F + + L + M+ KG P+ ++ + L K +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 272 SWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQT 331
+A KL+ M+ G PD V YN +I GFCR A+KV ML PN Y+T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+I LC +G F+ ++ + K + P + L++G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQ-ANKLMGLM 282
+T LI + + PE + M+ P N + LV+ R Q A +L
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDF 342
+ G+ P+ +YNL+++ FC + L +A +++ ML R ++P+ Y+ +I C++G
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 343 NLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
N A + D + K +VP + + LL L + Q
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ V + N+ + + S D L ++ E+ +++ D+F+++ +I + C G +D
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDA 246
Query: 205 AYLVMVEMQKLGVK-----------------------------------PDVITYTTLIS 229
A + EM+ G+K P+VIT+ L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 230 AFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEP 289
F K+ + + N L+ M+ +G PN+ T+N + + R +AN ++ LM R P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 290 DEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMC 349
D VT+ +IKG+C +D KV+ + R L+ N Y ++ CQ G LA +
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
++ + +P V T LL+GL N + KA I +Q+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 12/265 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+ G I A+ F +M G K +V + N+ ++ L ++ L ++ + I ++
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNV 298
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN+++ F + G L +A + EM G+ P++ITY TL+ + NR N + +L
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV C P++ TF I+ +R K+ + + G+ + VTY+++++GFC+SG
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +A++++ M+ ++P+ Y ++ LC G A + +D K + +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 367 LLEGLKKNNQ-----------PCKA 380
++EG+ K + PCK
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKG 503
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%)
Query: 182 IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGN 241
I +I++ NI+I FC AY V+ ++ KLG +PD T+ TLI + + +
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
L + MV GC P++ T+N + + + A L+ M+ ++ D TY+ +I
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR G +D A ++ M + + + Y +++ LC+ G +N ++ KD + + VP+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 362 DTISALLEGLKKNNQPCKANTI 383
T + LL+ K + +AN +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANEL 320
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 93/184 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +F +IK +C + +D V + K G+ + +TY+ L+ F + + ++ L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+ + + L + + +A ++ +Q+ ++ V Y +I+G C+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ A ++ ++ + + PN Y MI LC++G + A I+ + + P+ T
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 365 SALL 368
+ L+
Sbjct: 547 NTLI 550
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N L V + L+ E+ + I +I ++N ++ +C L +A ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
M + PD++T+T+LI + R + G ++ + +G N T+++ +Q
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+ A +L M G+ PD +TY +++ G C +G L+ A +++ + ++ +Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
T+I +C+ G A+ + K P+V T + ++ GL K +AN ++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++ I++ C+ G L+KA + ++QK + ++ YTT+I K + E L+
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ CKG PN+ T+ V I L K +AN L+ M+ G P++ TYN +I+ R
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 305 GHLDMAKKVYSAM 317
G L + K+ M
Sbjct: 557 GDLTASAKLIEEM 569
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQ 183
+ ++G IK A + F +M +G V + L L ++ L KA++ F E +K +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF--EDLQKSKMD 470
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
I + +I+ C+ G ++ A+ + + GVKP+V+TYT +IS K N L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 244 WNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
M G PN T+N I+ HL + + A KL+ M+ G D + +VI
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA-KLIEEMKSCGFSADASSIKMVIDML- 588
Query: 303 RSGHLD 308
SG LD
Sbjct: 589 LSGELD 594
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%)
Query: 203 DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVR 262
D A + EM + P ++ ++ SA + + + + G N+ T N+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 263 IQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRL 322
I ++ A ++G + + G EPD T+N +IKG G + A + M+
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 323 MPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
P+ Y ++++ +C+ GD +LA + + ++N V T S +++ L ++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 271 RSWQANKLMGLMQRF---GIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
R+ Q N ++ ++ GI + T N++I FCR A V ++ P+
Sbjct: 100 RTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT 159
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALV 387
+ T+I L EG + A ++ ++ P V T ++++ G+ ++ A ++ +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 388 QRR 390
+ R
Sbjct: 220 EER 222
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 9/266 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF-HIQFDIFSF 189
++ A++ +M GC ++ + + ++ + FL E+ KF ++ D+ +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM--KFMGLEADLVVY 250
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
+I+ FC+ G LD+ + E+ + G P ITY TLI F K + + + ++ M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
+G PN+ T+ I L ++ +A +L+ LM EP+ VTYN++I C+ G +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN----LAYIMCKDSMKKNWVPSVDTIS 365
A ++ M RR P+ Y ++ LC +GD + L Y+M KDS + P V + +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYN 428
Query: 366 ALLEGLKKNNQPCKANTIMALVQRRV 391
AL+ GL K N+ +A I L+ ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%)
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
F++++ NI++K C KA ++ EM++ + PDV +Y T+I F + E L
Sbjct: 140 FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
N M GC +L T+ + I + +A + M+ G+E D V Y +I+GFC
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDT 363
G LD K ++ +L R P Y T+I C+ G A + + +++ P+V T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 364 ISALLEGL 371
+ L++GL
Sbjct: 320 YTGLIDGL 327
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KAG + AM +M G + + + ++ + +L +A EV E+
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
I ++N +I+ FC++G L +A + M + GV+P+V TYT LI + + L
Sbjct: 282 AI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 245 NLMVCKGCFPNLATFN---------------VRIQHLVNKRRSW---------------- 273
NLM+ K PN T+N V I L+ KRR+
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 274 ----QANKLMGLMQRFG--IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRK 327
+A+KL+ LM + +PD ++YN +I G C+ L A +Y ++ + +R
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 328 IYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
+++ + GD N A + K V + DT +A+++G K
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I FC+ G+L+ A ++ +M+ ++P V Y L+S+ K+ + L+ M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
FP++ +FN+ I + A L+ M R G+ PD TY+ +I F + G+L
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
D A + M+ P+ I +++ Y +G+
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGE 649
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 5/214 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL--MEVPEKFHIQF 184
KAG + AM+ + + R + A + ++ L + L M V E +Q
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE---LQP 527
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+F +N ++ + C+ G LD+A+ + EMQ+ PDV+++ +I K + L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M G P+L T++ I + +A M G EPD + V+K
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G D ++ ++ + ++ ++++ T++ Y+C
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQ 183
+ K GM+ A M + + +V N L L + L QA+ L E ++ +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD--QAWRLFEEMQRDNNF 561
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D+ SFNI+I + G + A ++V M + G+ PD+ TY+ LI+ F K +
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
++ MV G P+ + +++ +++ + + +L+ + I D+ V+ C
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681
Query: 304 -SGHLDMAKKV 313
S ++D+AK++
Sbjct: 682 SSANMDLAKRL 692
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 222 ITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGL 281
++ + L+ + + + G+ LM+ +G N+ N+ ++ L +A L+
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
M+R + PD +YN VI+GFC L+ A ++ + M G + + +I C+ G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 342 FNLA 345
+ A
Sbjct: 228 MDEA 231
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
L++ + E+ + M+ F N + + ++ V R++ A ++ LM + G
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+ +N+++KG CR+ A + M LMP+ Y T+I C+
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 4/251 (1%)
Query: 130 MIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSF 189
M+ A++ FY M G ++ N L +L+ ++ F ++ + I+ ++++F
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM-YRMEIKSNVYTF 228
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVC 249
NI+I C+ G L KA + M+ G+KP ++TY TL+ F R E + + M
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
KG P++ T+N + + N+ R A++++ M+ G+ PD V+YN++I+G +G L+M
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEM 345
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
A M+ + ++P Y T+IH L E A I+ ++ +K V T + L+
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 370 GLKKNNQPCKA 380
G ++ KA
Sbjct: 406 GYCQHGDAKKA 416
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 149 TVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLV 208
T + N + L ++A + + E+ EK I D ++NI+I +C+ G KA+ +
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREK-GIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 209 MVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
EM G++P TYT+LI + N+ + L+ +V KG P+L N +
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+A L+ M I PD+VTYN +++G C G + A+++ M R + P+
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
Y T+I ++GD A+++ + + + P++ T +ALL+GL KN +
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
I+ L + I++A + DM+ K V + N + VL + LK + FL + E F
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL-GIMEVF 254
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRP--- 237
I+ I ++N +++ F G ++ A L++ EM+ G +PD+ TY ++S + R
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV 314
Query: 238 -----EIG-----------------NGLWNL-------MVCKGCFPNLATFNVRIQHLVN 268
EIG NG + MV +G P T+N I L
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 269 KRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKI 328
+ + A L+ ++ GI D VTYN++I G+C+ G A ++ M+ + P +
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 329 YQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
Y ++I+ LC++ A + + + K P + ++ L++G
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D S+NI+I+ G L+ A+ EM K G+ P TY TLI + +N+ E L
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG + T+N+ I + +A L M GI+P + TY +I CR
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
A +++ ++G+ + P+ + T++ C G+ + A+ + K+ + P T
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR---VPHFSSNQL 399
+ L+ GL + +A +M ++RR H S N L
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
F+++++ C++ ++D+A M++ G P T +++ + NR E + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
N+ TFN+ I L + + +A +G+M+ FGI+P VTYN +++GF G ++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A+ + S M + P+ + Y ++ ++C EG A + ++ + VP + + L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 369 EGLKKNNQ 376
G N
Sbjct: 335 RGCSNNGD 342
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 106 QKSLPQGRREGFIMRIMMLYGKA--GMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES 163
+K + +G + +M ++ G G + A +M + + N ++ L
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 164 RDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVIT 223
+ + + E+ + I+ D S+N +I + + G A++V EM LG P ++T
Sbjct: 516 GKFEEARELMGEMKRR-GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVN 268
Y L+ K+ E+ L M +G PN ++F I+ + N
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 157/334 (47%), Gaps = 3/334 (0%)
Query: 50 ALVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSL 109
A+ +K ERDP+ + +F + + N + + L ++F ++ +L K
Sbjct: 59 AVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYE 118
Query: 110 PQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYG-CKRTVKSLNAALKVLTESRDLKA 168
+E + +M + ++ + M+ F + + K ++ +++ L +L +S ++
Sbjct: 119 TCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNL 178
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVK-PDVITYTTL 227
+ L+ +Q + FNI++K C+ G ++ A+LV+ EM++ G+ P+ ITY+TL
Sbjct: 179 SRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTL 238
Query: 228 ISAFYKDNRPEIGNGLWNLMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+ + +R + L+ M+ K G P+ TFNV I +A K++ M++ G
Sbjct: 239 MDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNG 298
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
P+ Y+ ++ GFC+ G + AK+ + + L + Y T+++ C+ G+ + A
Sbjct: 299 CNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAM 358
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ + T + +L GL + +A
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 97/189 (51%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++++++ ++ FC++G + +A E++K G+K D + YTTL++ F ++ + L
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M C + T+NV ++ L ++ RS +A +++ G+ ++ +Y +++ C +
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G L+ A K S M R + P+ + ++ LC+ G + + ++ +P +
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSW 481
Query: 365 SALLEGLKK 373
A++E + K
Sbjct: 482 GAVVESICK 490
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 1/215 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ +AG ++ A M GC V + +A + + ++ + EV +K ++
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV-KKTGLKL 336
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D + ++ FC G D+A ++ EM+ + D +TY ++ + R E +
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ +G N ++ + + L +A K + +M GI P T+N ++ C S
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCES 456
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
G+ ++ +V L L+P K + ++ +C+E
Sbjct: 457 GYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 17/293 (5%)
Query: 89 RLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYG--KAGMIKHAMDTFYDMHLYGC 146
RL R+ I +LE ++P I +M+ G KAG I +A+ M +
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPD-----VITYNVMISGYCKAGEINNALSVLDRMSV--- 200
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF---HIQFDIFSFNIVIKAFCEMGILD 203
V + N L+ L +S LK QA MEV ++ D+ ++ I+I+A C +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLK--QA--MEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A ++ EM+ G PDV+TY L++ K+ R + N M GC PN+ T N+ +
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
+ + + R A KL+ M R G P VT+N++I CR G L A + M
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
PN Y ++H C+E + A + + + P + T + +L L K+ +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G + A+ DM GC+ V + N L+ + + + L ++ K +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSV 344
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FNI+I C G+L +A ++ +M + G +P+ ++Y L+ F K+ + +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
MV +GC+P++ T+N + L + A +++ + G P +TYN VI G ++G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
A K+ M + L P+ Y +++ L +EG + A + + P+ T ++
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 367 LLEGLKKNNQPCKA 380
++ GL K+ Q +A
Sbjct: 525 IMLGLCKSRQTDRA 538
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 140 DMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEM 199
DM G +V + N + L L L ++P+ Q + S+N ++ FC+
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKE 392
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
+D+A + M G PD++TY T+++A KD + E + N + KGC P L T+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
N I L ++ +A KL+ M+ ++PD +TY+ ++ G R G +D A K +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ PN + +++ LC+ + A + + P+ + + L+EGL
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI +I+ FC +G KA ++ ++ G PDVITY +IS + K EI N L
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG--EINNAL- 192
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+++ P++ T+N ++ L + + QA +++ M + PD +TY ++I+ CR
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
+ A K+ M R P+ Y +++ +C+EG + A D P+V T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+ +L + + A ++A + R+
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRK 338
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 200 GILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATF 259
G L++ + + M G PD+I TTLI F + + + ++ G P++ T+
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 260 NVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLG 319
NV I ++ + N + ++ R + PD VTYN +++ C SG L A +V ML
Sbjct: 176 NVMISGYC---KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 320 RRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
R P+ Y +I C++ A + + + P V T + L+ G+ K +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 123 MLYG--KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+L+G K + A++ M GC + + N L L + ++ L ++ K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ ++N VI + G KA ++ EM+ +KPD ITY++L+ ++ + +
Sbjct: 445 CSPV-LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
++ G PN TFN + L R++ +A + M G +P+E +Y ++I+G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
G A ++ + + + LM Q
Sbjct: 564 LAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
+ TL S + N GNG ++ + ++ + N ++ +V + K + M
Sbjct: 75 FETLSSGYSNSN----GNGHYSSVNSSFALEDVESNN-HLRQMVRTGELEEGFKFLENMV 129
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
G PD + +I+GFCR G A K+ + G +P+ Y MI C+ G+ N
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 344 LA 345
A
Sbjct: 190 NA 191
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTES-RDLKAIQAFLMEVPEKFHIQFD 185
K+ + +A+D M G V + N+ + L S R A + ++ K I D
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR--MVSCMTKREIYPD 255
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+F+FN +I A + G + +A EM + + PD++TY+ LI +R + ++
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV KGCFP++ T+++ I ++ KL M + G+ + VTY ++I+G+CR+G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
L++A++++ M+ + PN Y ++H LC G A ++ D K + T +
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 366 ALLEGLKKNNQPCKANTI 383
++ G+ K + A I
Sbjct: 436 IIIRGMCKAGEVADAWDI 453
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKA--IQAFLMEVPEKFHIQFDIFS 188
+ ++D F+ H+ C R + S+ ++L+ +K + +L E + I ++ +
Sbjct: 62 LDDSLDLFF--HMVQC-RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT 118
Query: 189 FNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMV 248
NI++ FC L A + +M KLG +P ++T+ +L++ F + +R +++ MV
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 249 CKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
G PN+ +N I L ++ A L+ M++ GI PD VTYN +I G C SG
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 309 MAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALL 368
A ++ S M R + P+ + +I +EG + A ++ ++++ P + T S L+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 369 EGL 371
GL
Sbjct: 299 YGL 301
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 89/156 (57%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +++I+I +C+ ++ + EM + GV + +TYT LI + + + + ++
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+NV + L + + +A ++ MQ+ G++ D VTYN++I+G C++
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G + A +Y ++ + LMP+ Y TM+ L ++G
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 35/240 (14%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +N +I C+ +D A ++ M+K G+ PDV+TY +LIS R +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNK--------------RRSW----------------- 273
+ M + +P++ TFN I V + RRS
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 274 ----QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
+A ++ G M G PD VTY+++I G+C+S ++ K++ M R ++ N Y
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 330 QTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
+I C+ G N+A + + + P++ T + LL GL N + KA I+A +Q+
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + G + + N L L +FL ++ + H + I +F ++ FC
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGD 165
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
+ A + +M +G KP+V+ Y T+I K + + L N M G P++ T+N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I L + R A +++ M + I PD T+N +I + G + A++ Y M+ R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
L P+ Y +I+ LC + A M + K P V T S L+ G K+ +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ ++ T L++ F + ++ +
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ TF + R + A + M G +P+ V YN +I G C+S
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+D A + + M + P+ Y ++I LC G ++ A M K+ P V T +
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 366 ALLEGLKKNNQPCKANTIMALVQRR 390
AL++ K + +A + RR
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRR 285
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD + + M + P + ++ L+SA K + ++ LW M G NL T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
+ + A +G M + G EP VT+ ++ GFCR + A ++ M+G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKAN 381
PN IY T+I LC+ + A + K P V T ++L+ GL + + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 382 TIMALVQRR 390
+++ + +R
Sbjct: 242 RMVSCMTKR 250
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y +AG + A + F M G + + N L L ++ ++ L ++ +K +
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM-QKNGMDA 429
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++NI+I+ C+ G + A+ + + G+ PD+ TYTT++ YK + L+
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 245 NLMVCKGCFPN 255
M G PN
Sbjct: 490 RKMKEDGILPN 500
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ +A++ FY M G + + N + L+ S L ++ ++ I ++ F
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFT 258
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I F + G L +A + EM + V P+V TY +LI+ F +++LMV K
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GCFP++ T+N I +R KL M G+ D TYN +I G+C++G L++A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+KV++ M+ + P+ Y ++ LC G A +M +D K + T + +++G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 371 LKKNNQ 376
L + ++
Sbjct: 439 LCRTDK 444
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%)
Query: 169 IQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLI 228
I +L E I D++SF I+I FC L A ++ +M KLG +P ++T +L+
Sbjct: 97 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 156
Query: 229 SAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIE 288
+ F + NR + L + M G PN+ +N I L R A ++ M++ GI
Sbjct: 157 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 289 PDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIM 348
D VTYN +I G SG A ++ M+ R++ PN + +I +EG+ A +
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 349 CKDSMKKNWVPSVDTISALLEGL 371
K+ ++++ VP+V T ++L+ G
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGF 299
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 94/176 (53%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +I FC+ ++ + EM G+ D TY TLI + + + + ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
N MV G P++ T+N+ + L N + +A ++ +Q+ ++ D +TYN++I+G CR+
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
L A ++ ++ + + P+ Y TMI LC++G A +C+ + ++PS
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L++ + F ++ +N VI C+ L+ A V M+K G++ D +TY TLIS
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L MV + PN+ F I V + +A L M R + P+
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQE 339
TYN +I GFC G L AK ++ M+ + P+ Y T+I C+
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + ++ FC+ +A ++ M G P+V+ Y T+I+ K+ ++
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M KG + T+N I L N R A +L+ M + I+P+ + + +I F + G
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+L A+ +Y M+ R ++PN Y ++I+ C G A M + K P V T +
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 366 ALLEGLKKNNQ 376
L+ G K+ +
Sbjct: 329 TLITGFCKSKR 339
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 6/214 (2%)
Query: 124 LYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQ 183
++G G K+ D M GC V + N + +S+ ++ E+ + +
Sbjct: 301 IHGCLGDAKYMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
D F++N +I +C+ G L+ A V M GV PD++TY L+ + + E +
Sbjct: 358 -DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ ++ T+N+ IQ L + +A L + R G++PD + Y +I G CR
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 304 SGHLDMAKKVYSAMLGRRLMPNRKIYQTMI--HY 335
G A K+ M MP+ +IY + HY
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
D A+ + EM + P ++ +T +++ K N+ +I L++ M G +L +F +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I R A L+G M + G P VT ++ GFC+ A + +M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLA----YIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+PN IY T+I+ LC+ D N A Y M K ++ + V T + L+ GL + +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV----TYNTLISGLSNSGRW 235
Query: 378 CKANTIM-ALVQRRV 391
A ++ +V+R++
Sbjct: 236 TDAARLLRDMVKRKI 250
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 16/322 (4%)
Query: 61 EKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRRE----- 115
+K ++F + +VI + ++ L G+ R D I +H L +G E
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIA---DHFDKLCRGGIEPSGVS 218
Query: 116 --GFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFL 173
GF++ + G+ + A+D + G + + S N LK L S D + + L
Sbjct: 219 AHGFVLDALFCKGE---VTKALDFHRLVMERGFRVGIVSCNKVLKGL--SVDQIEVASRL 273
Query: 174 MEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYK 233
+ + ++ +F +I FC+ G +D+A+ + M++ G++PD+I Y+TLI ++K
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 234 DNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+G+ L++ + KG ++ F+ I V A+ + M GI P+ VT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 294 YNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM 353
Y ++IKG C+ G + A +Y +L R + P+ Y ++I C+ G+ + + +D +
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 354 KKNWVPSVDTISALLEGLKKNN 375
K + P V L++GL K
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQG 475
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTE-SRDLKAIQAF-LMEVPEKFHIQF 184
K G++ HAM M + V N+ + +R +A++ F LM + + I+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI---YGIKP 529
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ +F V++ G L++A + M K+G++PD + Y TLI AF K +P IG L+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+LM ++A NV I L R A+K + +EPD VTYN +I G+C
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
LD A++++ + PN +IH LC+ D + A M +K P+ T
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 365 SALLEGLKKN 374
L++ K+
Sbjct: 710 GCLMDWFSKS 719
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
Y KAGM+ F G K V ++ + V +S DL + + I
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISP 389
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++ I+IK C+ G + +A+ + ++ K G++P ++TY++LI F K G L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ G P++ + V + L + A + M I + V +N +I G+CR
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
D A KV+ M + P+ + T++ EG A + K P
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 365 SALLEGLKKNNQPCKANTIMALVQR 389
L++ K+ +P + L+QR
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQR 594
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI ++N +I +C + LD+A + ++ P+ +T T LI K+N + ++
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++M KG PN T+ + + KL MQ GI P V+Y+++I G C+
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G +D A ++ + +L+P+ Y +I C+ G
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 82/156 (52%)
Query: 235 NRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTY 294
++ E+ + L +L++ G PN+ TF I + +A L +M++ GIEPD + Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 295 NLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMK 354
+ +I G+ ++G L M K++S L + + + ++ + I + GD A ++ K +
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 355 KNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T + L++GL ++ + +A + + +R
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+ I+I C+ +D A + M + G KP+ +TY L+ F K E L+ M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
KG P++ ++++ I L + R +A + + PD V Y ++I+G+C+ G L
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHY 335
A +Y ML + P+ + + + Y
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRALSEY 820
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L ++ ++ I DI N+VI + ++ A + + ++PD++TY T+I +
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R + ++ L+ PN T + I L A ++ +M G +P+ V
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY ++ F +S ++ + K++ M + + P+ Y +I LC+ G + A + +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKA 380
+ +P V + L+ G K + +A
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ + +++ + G++ A V+M ++ +V+ + +LI + + NR + ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
LM G P++ATF ++ + + R +A L M + G+EPD + Y +I FC+
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYL 336
+ +++ M ++ + + +IH L
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 94 RRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSL 153
RR D E + E K P G + ++ + K + A+ F M G K +
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 154 NAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQ 213
+ ++S D++ E+ EK I I S++I+I C+ G +D+A + +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 214 KLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPN 255
+ PDV+ Y LI + K R L+ M+ G P+
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 197 CEMGILDKAYLVMVEMQKLGVK-PDVITYTTLISAFYKDNRPEIGNGLWNL--------- 246
C G++DKA + V +LGV P Y L S D I + L
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 247 ----------MVCKGCFPNLATFNVRIQH------LVNKRRSWQ---------ANKLMGL 281
+ CKG F+ + +V+ + + A++L+ L
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 282 MQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGD 341
+ G P+ VT+ +I GFC+ G +D A ++ M R + P+ Y T+I + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 342 FNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTI 383
+ + + ++ K V S+ ++ K+ A+ +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 181/415 (43%), Gaps = 72/415 (17%)
Query: 53 KLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQG 112
+L+ E FK+ A++ + FE + +LA + D +++LL+ K
Sbjct: 49 RLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH 108
Query: 113 RREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAF 172
E + ++ +Y + G+ + A++ FY + +GC +VK N L L ++ I
Sbjct: 109 CSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV 168
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISA-- 230
++ ++ + ++F++N+++KA C+ +D A ++VEM G PD ++YTT+IS+
Sbjct: 169 YRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 231 ---FYKDNRP---------EIGNGLWN----------------LMVCKGCFPNLATFNVR 262
K+ R + N L N MV KG PN+ +++
Sbjct: 228 EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 263 IQHLVN-----------------------------------KRRSWQANKLMGLMQR-FG 286
I L N + ++ A L M R FG
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
++P+ V YN +++GFC G++ A V+S M PN + Y ++I+ + G + A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR-----VPHFSS 396
+ + P+V + ++E L ++++ +A +++ ++ + VP F++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALK-VLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+G I+ A M GC + +L++ +K A+ + ++ F +Q ++
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW-NQMIRGFGLQPNV 352
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +++ FC G + KA V M+++G P++ TY +LI+ F K + +WN
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ GC PN+ + ++ L + +A L+ +M + P T+N IKG C +G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 307 LDMAKKVYSAMLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
LD A+KV+ M + R PN Y ++ L + AY + ++ + S T +
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 366 ALLEG 370
LL G
Sbjct: 533 TLLHG 537
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 4/247 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ K G + A+ + M GC V ++ L K ++ L+E+ K +
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES-LIEIMSKENCAP 455
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEM-QKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+ +FN IK C+ G LD A V +M Q+ P+++TY L+ K NR E GL
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCR 303
+ +G + +T+N + N A +L+G M G PDE+T N++I +C+
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 304 SGHLDMAKKVYSAM-LGRR-LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
G + A ++ + GRR P+ Y +I LC+ I+ + + VPS+
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 362 DTISALL 368
T S L+
Sbjct: 636 ATWSVLI 642
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Query: 147 KRTVKSLNAALKVLTESRDLKAIQAFLMEVP-EKFHIQFDIFSFNIVIKAFCEMGILDKA 205
K T + ++ L + ++Q L ++ + FH D+F VI + ++G+ ++A
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERA 130
Query: 206 YLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQH 265
+ +++ G P V Y ++ +NR ++ ++ M G PN+ T+NV ++
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L + A KL+ M G PD V+Y VI C G + ++ L R P
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPV 245
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMA 385
+Y +I+ LC+E D+ A+ + ++ ++K P+V + S L+ L + Q A + +
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 386 LVQRRVPHFSSNQLSAF 402
+ +R H + LS+
Sbjct: 306 QMLKRGCHPNIYTLSSL 322
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 7/250 (2%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
A++ F +M G + V + ++ + L L ++ E+ I ++ +FN +I
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALI 337
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K CF
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
PN+ T+N I +R + +L M + G+ + VTY +I GF ++ D A+ V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ M+ + PN Y T++ LC+ G A ++ + + P++ T + ++EG+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM-- 515
Query: 374 NNQPCKANTI 383
CKA +
Sbjct: 516 ----CKAGKV 521
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ + + + L + D+ AF L+ E I+ ++ ++ VI + C+ D
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDL--AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + EM+ GV+P+VITY++LIS R + L + M+ + PN+ TFN I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN Y T+I+ C+ + + ++ ++ V + T + L+ G
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I +++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G +D+A + + M ++ N IY T+I LC+ + A + +
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ +++R++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + A L+ M+ IE + V Y+ VI C+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H D A +++ M + + PN Y ++I LC ++ A + D +++ P+V T +
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 366 ALLEGLKKNNQPCKA 380
AL++ K + +A
Sbjct: 335 ALIDAFVKEGKLVEA 349
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +V+ C+ G +D A+ ++ +M+ ++ +V+ Y+T+I + K +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L N R A++L+ M I P+ VT+N +I F
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 363 TISALLEGLKKNNQPCKANTI 383
T + L+ G CKA I
Sbjct: 402 TYNTLINGF------CKAKRI 416
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +I FC+ +D+ + EM + G+ + +TYTTLI F++ + ++
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N + L + +A + +QR +EP TYN++I+G C++
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G ++ ++ ++ + + P+ IY TMI C++G
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF FN ++ A +M D + +MQ+LG+ ++ TY LI+ F + ++ + L
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T + + + +R A L+ M G PD +T+ +I G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
A + M+ R PN Y +++ LC+ GD +LA+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQ-AFLMEVPEKFHIQ 183
+ KA I ++ F +M G + + ++RD Q F V + H
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP- 468
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL 243
+I ++N ++ C+ G L+KA +V +Q+ ++P + TY +I K + E G L
Sbjct: 469 -NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 244 WNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVT 293
+ + KG P++ +N I K +A+ L M+ G PD T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + M K P + + L+SA K + ++ L M G NL T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A L+G M + G EP VT + ++ G+C + A + M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + A + +++ P++ T ++ GL K
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ MV P++ FN + + ++ L MQR GI + TYN++I F
Sbjct: 71 GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR + +A + M+ P+ ++++ C + A + ++ + P
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
T + L+ GL +N KA+ +ALV R V L + +++
Sbjct: 191 ITFTTLIHGLFLHN---KASEAVALVDRMVQRGCQPNLVTYGVVVN 233
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
++ A+D F +M G + V + N+ + L L + EK I ++ +FN
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFN 332
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM + + PD ITY LI+ F NR + ++ MV K
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
C PN+ T+N I +R +L M + G+ + VTY +I+GF ++G D A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ R+ + Y ++H LC G + A ++ K K ++ + ++EG
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 513 M------CKAGKV 519
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L+ E I+ ++ FN +I + C+ ++
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDID-LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM+ G++P+V+TY +LI+ R + L + M+ K PN+ TFN I
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
+ + +A KL M + I+PD +TYNL+I GFC LD AK+++ M+ + +P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
N + Y T+I+ C+ + ++ ++ V + T + +++G + A +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 385 -ALVQRRVP 392
+V RVP
Sbjct: 457 KQMVSNRVP 465
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A+D F DM ++ N L + + + + + L E + I D+++++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVIS-LGEQMQTLGISHDLYTYS 122
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
I I FC L A V+ +M KLG +PD++T ++L++ + R L + MV
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
G P+ TF I L ++ +A L+ M + G +PD VTY V+ G C+ G +D+A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ + M R+ N I+ T+I LC+ +A + + K P+V T ++L+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 371 L 371
L
Sbjct: 303 L 303
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
DI + + ++ +C + A ++ +M ++G KPD T+TTLI + N+ L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ MV +GC P+L T+ + L + A L+ M+ I+ + V +N +I C+
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
H+++A +++ M + + PN Y ++I+ LC G ++ A + + ++K P+V T
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 365 SALLEGLKKNNQPCKANTIM-ALVQRRV 391
+AL++ K + +A + ++QR +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 134/326 (41%), Gaps = 36/326 (11%)
Query: 83 FEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMH 142
F +S +A +F+ + L E ++L + + + + A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 143 LYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGIL 202
G + + +L++ L S+ + A + ++ E + + D F+F +I
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY-KPDTFTFTTLIHGLFLHNKA 204
Query: 203 DKAYLVMVEMQKLGVKPDVITY-----------------------------------TTL 227
+A ++ +M + G +PD++TY T+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGI 287
I + K E+ L+ M KG PN+ T+N I L N R A++L+ M I
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 288 EPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYI 347
P+ VT+N +I F + G L A+K++ M+ R + P+ Y +I+ C + A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 348 MCKDSMKKNWVPSVDTISALLEGLKK 373
M K + K+ +P++ T + L+ G K
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++N +I FC+ ++ + EM + G+ + +TYTT+I F++ + ++
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV ++ T+++ + L + + A + +Q+ +E + YN +I+G C++
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC-----QEGD 341
G + A ++ ++ + P+ Y TMI LC QE D
Sbjct: 517 GKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEAD 555
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ +I+ F + G D A +V +M V D++TY+ L+ + + ++ +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
N+ +N I+ + + +A L I+PD VTYN +I G C L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A ++ M +PN Y T+I ++ D + + K+ +V TIS
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
+D A + +M K P ++ + L+SA K N+ E+ L M G +L T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++ M + G EPD VT + ++ G+C S + A + M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + A + +++ P + T ++ GL K
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
FP++ FN + + + L MQ GI D TY++ I FCR L +A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
V + M+ P+ ++++ C + A + ++ + P T + L+ GL
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 373 KNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
+N KA+ +ALV + V L + ++++
Sbjct: 200 LHN---KASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKD 234
I+ D+ ++N +I C +L +A + +M++ G P+ TY TLI A +D
Sbjct: 528 SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILD 203
GC+ + + + L + D+ AF L+ E I+ D+ FN +I + C+ +D
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDL--AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 204 KAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
A + EM+ G++P+V+TY++LIS R + L + M+ K PNL TFN I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
V + + +A KL M + I+PD TYN +I GFC LD AK+++ M+ +
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
P+ Y T+I C+ + ++ + V T + L++GL
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ EK I ++ +FN
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFN 259
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G +A + +M K + PD+ TY +LI+ F +R + ++ MV K
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFP+L T+N I+ +R +L M G+ D VTY +I+G G D A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVP-SVDTISALLE 369
+KV+ M+ + P+ Y ++ LC G A + D M+K+ + + + ++E
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA-LEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 370 GLKKNNQPCKANTI 383
G+ CKA +
Sbjct: 439 GM------CKAGKV 446
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + A L+ M+ IE D V +N +I C+
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A ++ M + + PN Y ++I LC G ++ A + D ++K P++ T +
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 260 ALIDAFVKEGKFVEAEKL 277
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 169 IQAFLME----VPEKFH-------IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGV 217
I AF+ E EK H I DIF++N +I FC LDKA + M
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 218 KPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANK 277
PD+ TY TLI F K R E G L+ M +G + T+ IQ L + A K
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 278 LMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLC 337
+ M G+ PD +TY++++ G C +G L+ A +V+ M + + IY TMI +C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 338 QEGDFNLAY-IMCKDSMKKNWVPSVDTISALLEGL 371
+ G + + + C S+ K P+V T + ++ GL
Sbjct: 442 KAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGL 475
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 115/220 (52%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I +++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 32 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 91
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 92 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G +D+A + + M ++ + I+ T+I LC+ + A + K+
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ ++++++
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ ++ + EM G+ D +TYTTLI + D + ++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + +A ++ MQ+ I+ D Y +I+G C++
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D ++ ++ + + PN Y TMI LC + AY + K + +P T
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 504 NTLIRAHLRDGDKAASAELI 523
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 101/194 (52%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +V+ C+ G +D A+ ++ +M+ ++ DV+ + T+I + K +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L + R A++L+ M I P+ VT+N +I F
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G A+K++ M+ R + P+ Y ++I+ C + A M + + K+ P +D
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 363 TISALLEGLKKNNQ 376
T + L++G K+ +
Sbjct: 327 TYNTLIKGFCKSKR 340
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
IF FN ++ A +M D + +MQ+LG+ ++ TY LI+ F + ++ + L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T + + + +R A L+ M G PD +T+ +I G
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
A + M+ R PN Y +++ LC+ GD +LA+
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F + +K I+ DI+ + +I+ C+ G +D + + + GVKP+V+TY T
Sbjct: 413 KALEVF--DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+IS + L M G P+ T+N I+ HL + ++ A
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%)
Query: 219 PDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
P + + L+SA K + ++ L M G NL T+N+ I + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 279 MGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
+G M + G EP VT + ++ G+C + A + M+ P+ + T+IH L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 339 EGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+ A + +++ P++ T ++ GL K
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 253 FPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKK 312
P++ FN + + ++ L MQR GI + TYN++I FCR + +A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 313 VYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLK 372
+ M+ P+ ++++ C + A + ++ + P T + L+ GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 373 KNNQPCKANTIMALVQRRV 391
+N KA+ +ALV R V
Sbjct: 127 LHN---KASEAVALVDRMV 142
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI---------------- 222
K + D++SF I+IK CE G ++K++ +++E+ + G P+V+
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 223 -------------------TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRI 263
TYT LI+ +K+ + G ++ M G FPNL T+N +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L R+ A ++ M+ G+ + VTYN +I G CR L+ A KV M +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL-KKNNQPCKANT 382
PN Y T+I C G A +C+D + PS+ T + L+ G +K + A
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 383 IMALVQRRV 391
+ + +R +
Sbjct: 396 VKEMEERGI 404
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G K A F +M G + + N + L L + ++ I ++
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNL 338
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I FC +G L KA + +++ G+ P ++TY L+S F + +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M +G P+ T+ + I +A +L M+ G+ PD TY+++I GFC G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A +++ +M+ + PN IY TMI C+EG A + K+ +K P+V +
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 367 LLEGLKKNNQPCKANTIM 384
++E L K + +A ++
Sbjct: 519 MIEVLCKERKSKEAERLV 536
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 3/255 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLT-ESRDLKAIQAFLMEVPEKFHIQFD 185
K G+ K + + M G + + N + L + R A Q F E+ E+ + +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF-DEMRER-GVSCN 302
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I ++N +I C L++A V+ +M+ G+ P++ITY TLI F + L
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+ +G P+L T+N+ + K + A K++ M+ GI+P +VTY ++I F RS
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
+++ A ++ +M L+P+ Y +IH C +G N A + K ++KN P+ +
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 366 ALLEGLKKNNQPCKA 380
++ G K +A
Sbjct: 483 TMILGYCKEGSSYRA 497
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 5/247 (2%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLM-EVPEKFHIQFD 185
K G I+ A D F++M G ++ + L ++ K Q F M E ++ + +
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK--QGFEMYEKMQEDGVFPN 267
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
++++N V+ C+ G A+ V EM++ GV +++TY TLI ++ + N + +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M G PNL T+N I + +A L ++ G+ P VTYN+++ GFCR G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK-NWVPSVDTI 364
A K+ M R + P++ Y +I + + A I + SM++ VP V T
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA-IQLRLSMEELGLVPDVHTY 446
Query: 365 SALLEGL 371
S L+ G
Sbjct: 447 SVLIHGF 453
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 128 AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIF 187
G + A+ D+ G ++ + N + D + E+ E+ I+
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER-GIKPSKV 409
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ I+I F ++KA + + M++LG+ PDV TY+ LI F + + L+ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V K C PN +N I + S++A KL+ M+ + P+ +Y +I+ C+
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 308 DMAKKVYSAMLGRRLMPNRKI 328
A+++ M+ + P+ I
Sbjct: 530 KEAERLVEKMIDSGIDPSTSI 550
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KAIQ L E+ + D+ +++++I FC G +++A + M + +P+ + Y T
Sbjct: 426 KAIQLRLS--MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFG 286
+I + K+ L M K PN+A++ I+ L +R+S +A +L+ M G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 287 IEPDEVTYNLV 297
I+P +L+
Sbjct: 544 IDPSTSILSLI 554
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 224 YTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQ 283
Y +I+++ + + +N MV G P FN + +V Q
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN-EN 155
Query: 284 RFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFN 343
+ + D ++ ++IKG C +G ++ + + + PN IY T+I C++G+
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 344 LAYIMCKDSMKKNWVPSVDTISALLEGLKKN 374
A + + K V + T + L+ GL KN
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKN 246
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
++ ++IKA C+ G++DKA+ + EM G KP+V TYT LI +D + E NG+ M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
V FP++ T+N I R A +L+ +M++ +P+ T+N +++G CR G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A + ML L P+ Y +I LC+EG N AY + + P T +A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 368 LEGLKKNNQPCKANTIMALVQRR 390
+ K + A+ + L+ R+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRK 505
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
S++I+I CE+G L++A+ + +M + G +P TYT LI A + L++ M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 248 VCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHL 307
+ +GC PN+ T+ V I L + +AN + M + I P +TYN +I G+C+ G +
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 308 DMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
A ++ + M R PN + + ++ LC+ G A + K + P + + + L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 368 LEGLKKNNQ 376
++GL +
Sbjct: 448 IDGLCREGH 456
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F++E K I S N+++ + + + ++ ++ KLG+ P V+TYTTL+
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ + LM GC PN+ + + I L R +A KL+ MQ G+ P+
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 292 VTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIH--YLCQEG 340
VTY +++KG+ +G LD A + AM+ R N +IY +++ L Q+G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
+ + ++ A C+ G + A + M ++ K+G D T+L+ F + +++
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 246 LMVCK-GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+M + C PN ++++ I L R +A L M G +P TY ++IK C
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D A ++ M+ R PN Y +I LC++G A +C+ +K PSV T
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 365 SALLEGLKKNNQPCKANTIMALVQRR 390
+AL+ G K+ + A ++ ++++R
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKR 400
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 195 AFCE-MGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC + + D + V +++ P+ ++Y+ LI + R E GL + M KGC
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+ V I+ L ++ +A L M G +P+ TY ++I G CR G ++ A V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 314 YSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
M+ R+ P+ Y +I+ C++G A+ + K+ P+V T + L+EGL +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 374 NNQPCKA 380
+P KA
Sbjct: 419 VGKPYKA 425
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 36/261 (13%)
Query: 164 RDLKAIQAF-LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVI 222
+D + + AF L+ V EK + ++ +FN +++ C +G KA ++ M G+ PD++
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 223 TYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLM 282
+Y LI ++ L + M C P+ TF I + ++ A+ +GLM
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 283 QRFGIEPDEVTYNLVIKGFCRSGH--------------------------LDMAKKVYS- 315
R GI DEVT +I G C+ G LDM K
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 316 ----AMLGR----RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
AMLG+ L+P+ Y T++ L + GD ++ + + +P+V + +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 368 LEGLKKNNQPCKANTIMALVQ 388
+ GL + + +A +++ +Q
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQ 643
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 37/227 (16%)
Query: 180 FHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR--- 236
F I+ D +F +I AFC+ G D A + M + G+ D +T TTLI K +
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 237 ----------------PEIGNGLWNLMVCKGC-----------------FPNLATFNVRI 263
P N + + M+ KGC P++ T+ +
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILD-MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 264 QHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLM 323
L+ + +++ LM+ G P+ Y ++I G C+ G ++ A+K+ SAM +
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 324 PNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
PN Y M+ G + A + +++ + + S+LL+G
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 3/177 (1%)
Query: 197 CEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNL 256
CE +L Y + G + + Y++L+ + K + + + M G +
Sbjct: 136 CEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGM 195
Query: 257 ATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSA 316
+ + L + A M + + G D ++ GFCR +L A KV+
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 317 MLGR-RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSM-KKNWVPSVDTISALLEGL 371
M PN Y +IH LC+ G A+ + KD M +K PS T + L++ L
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLIKAL 311
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 102/269 (37%), Gaps = 62/269 (23%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYT------------------- 225
+++ + I+I C+ G +++A ++ MQ GV P+ +TYT
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 226 ----------------TLISAFY-------------------KDNRPEIGNGLWNLM-VC 249
+L+ F ++ PE N L +++
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734
Query: 250 KGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDM 309
GC L F + L + R+ ++N L+ + G+ E +++++ +C
Sbjct: 735 GGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTK 791
Query: 310 AKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLE 369
++ + +L +P+ K + +I L +EGD A + + + N V + +E
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVE 851
Query: 370 GLKKNNQPCKANTIMALVQ----RRVPHF 394
L + ++ + ++ LV R P F
Sbjct: 852 CLMEGDETGDCSEVIDLVDQLHCRERPTF 880
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + N+ ++ L L ++ E+ I ++ +F+
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 330
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T+N I+ +R + +L M + G+ + VTY +I GF ++ D A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ ++P+ Y ++ LC G A ++ + + P + T + ++EG
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 511 M------CKAGKV 517
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E + I ++++++I+I FC L A V+ +M KLG +PD++T +L++ F
Sbjct: 103 LGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC 162
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
NR L MV G P+ TFN I L R+ +A L+ M G +PD V
Sbjct: 163 HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G +D+A + M ++ P IY T+I LC + N A + +
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T ++L+ L + A+ +++ +++R++
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + DI + N ++ FC + A ++ +M ++G +PD T+ TLI ++ NR
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV KGC P+L T+ + + L + A L+ M++ IEP V YN +I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
C +++ A +++ M + + PN Y ++I LC G ++ A + D +++
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 359 PSVDTISALLEGLKKNNQPCKA 380
P+V T SAL++ K + +A
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEA 345
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 14/239 (5%)
Query: 151 KSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMV 210
K++N AL + TE D K I+ ++ ++N +I+ C G A ++
Sbjct: 270 KNVNDALNLFTE-MDNKGIRP-------------NVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 211 EMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKR 270
+M + + P+V+T++ LI AF K+ + L++ M+ + P++ T++ I
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 271 RSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQ 330
R +A + LM P+ VTYN +IKGFC++ +D +++ M R L+ N Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 331 TMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
T+IH Q + + A I+ K + +P + T S LL+GL N + A + +QR
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 141 MHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMG 200
M + GC+ + + + L + D+ + L ++ E+ I+ + +N +I A C
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYK 270
Query: 201 ILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++ A + EM G++P+V+TY +LI R + L + M+ + PN+ TF+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
I V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 321 RLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
PN Y T+I C+ + + ++ ++ V + T + L+ G
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N +IK FC+ +D+ + EM + G+ + +TYTTLI F++ + ++
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + A + +QR +EPD TYN++I+G C++
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ ++ ++ + + PN Y TM+ C++G A + ++ ++ +P T
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 575 NTLIRAHLRDGDKAASAELI 594
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q D+ ++ IV+ C+ G +D A ++ +M++ ++P V+ Y T+I A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T+N I+ L N R A++L+ M I P+ VT++ +I F
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G L A+K+Y M+ R + P+ Y ++I+ C + A M + + K+ P+V
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 363 TISALLEGLKK 373
T + L++G K
Sbjct: 398 TYNTLIKGFCK 408
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I F+ ++ A +M D + +MQ LG+ ++ TY+ LI+ F + ++ + +
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
M+ G P++ T N + + R A L+G M G +PD T+N +I G R
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
A + M+ + P+ Y +++ LC+ GD +LA + K + P V +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 366 ALLEGL 371
+++ L
Sbjct: 261 TIIDAL 266
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ E ++ ++ DI+++NI+I+ C+ G ++ + + + GVKP+V+TYTT++S F
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQANKLMGLMQRFGIEPDE 291
+ E + L+ M +G P+ T+N I+ HL + ++ A +L+ M+ D
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA-ELIREMRSCRFVGDA 606
Query: 292 VTYNLVIKGFCRSGHLD 308
T LV G LD
Sbjct: 607 STIGLVTN-MLHDGRLD 622
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNV 261
LD A + +M K P ++ ++ L+SA K N+ ++ L M G NL T+++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 262 RIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRR 321
I + + A ++ M + G EPD VT N ++ GFC + A + M+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 322 LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
P+ + T+IH L + + A + + K P + T ++ GL K
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 88/156 (56%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+F++N +I+ C+ G++D+A+ ++ ++ G +PDVI+Y L+ A + E G L
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M + C PN+ T+++ I L + +A L+ LM+ G+ PD +Y+ +I FCR
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEG 340
G LD+A + M+ +P+ Y T++ LC+ G
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFD- 185
K GM+ A + ++ L GC+ V S N L+ L + + + ++ F + D
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM---FSEKCDP 331
Query: 186 -IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+ +++I+I C G +++A ++ M++ G+ PD +Y LI+AF ++ R ++
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
M+ GC P++ +N + L ++ QA ++ G + G P+ +YN + S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G A + M+ + P+ Y +MI LC+EG + A+ + D + PSV T
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 365 SALLEGLKKNNQPCKANTI 383
+ +L G CKA+ I
Sbjct: 512 NIVLLGF------CKAHRI 524
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
+ME+ EKF Q D+F++N +I FC+M +D A V+ M+ PD +TY +I +
Sbjct: 146 VMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
+ ++ + N ++ C P + T+ + I+ + + +A KLM M G++PD
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TYN +I+G C+ G +D A ++ + + P+ Y ++ L +G + +
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQRR 390
+ P+V T S L+ L ++ + +A ++ L++ +
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 103/200 (51%)
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIG 240
+ Q + ++ I+I+A G +D+A +M EM G+KPD+ TY T+I K+ +
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 241 NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKG 300
+ + KGC P++ ++N+ ++ L+N+ + + KLM M +P+ VTY+++I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 301 FCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPS 360
CR G ++ A + M + L P+ Y +I C+EG ++A + + +P
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 361 VDTISALLEGLKKNNQPCKA 380
+ + +L L KN + +A
Sbjct: 403 IVNYNTVLATLCKNGKADQA 422
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 91/184 (49%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D ++NI+I + C G LD A V+ ++ +P VITYT LI A + + L
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ M+ +G P++ T+N I+ + + +A +++ ++ G EPD ++YN++++
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G + +K+ + M + PN Y +I LC++G A + K +K P +
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 365 SALL 368
L+
Sbjct: 372 DPLI 375
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 79 NKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQGRREGFIMRIMMLYGKAGMIKHAM 135
+ Y+++ ++ R D LE S LP ++ + GKA A+
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA---DQAL 423
Query: 136 DTFYDMHLYGCKRTVKSLNAALKVLTESRD-LKAIQAFLMEVPEKFHIQFDIFSFNIVIK 194
+ F + GC S N L S D ++A+ L + I D ++N +I
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG--IDPDEITYNSMIS 481
Query: 195 AFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFP 254
C G++D+A+ ++V+M+ P V+TY ++ F K +R E + MV GC P
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 255 NLATFNVRIQHL 266
N T+ V I+ +
Sbjct: 542 NETTYTVLIEGI 553
>sp|Q9LUD6|PP230_ARATH Pentatricopeptide repeat-containing protein At3g14580,
mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2
SV=1
Length = 405
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 58 RDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGR-REG 116
+DP L ++ + + + + +++ A+ +D IE ++ K + R E
Sbjct: 73 KDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEE 132
Query: 117 FIMRIMMLYGK-AGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLME 175
F +M +YG AG I A++ + M +GC + KS N L +L ++ I +
Sbjct: 133 FFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS 192
Query: 176 VPEKFHIQFDIFSFNIVIKAFCEMGIL--------------------------------- 202
P K ++ D NI+IK CE G L
Sbjct: 193 AP-KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 203 --DKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFN 260
++A+ ++ M+K ++PD IT+ LIS K R E G L M KGC PN T+
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQ 311
Query: 261 VRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR 320
+ L++K+R+ +A ++M M +G+ P ++Y ++ G C + + V M+
Sbjct: 312 EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNH 371
Query: 321 RLMPNRKIYQTMIH 334
+P ++ ++
Sbjct: 372 GFVPKTLMWWKVVQ 385
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%)
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
GC+P+ +FN + LV+ + + +K+ + G+E D N++IKG C SG+L+ A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
++ ++ PN + +I C +G F A+ + + K+ P T + L+ G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 371 LKKNNQ 376
L+K +
Sbjct: 282 LRKKGR 287
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 2/256 (0%)
Query: 117 FIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEV 176
F R++ L +K + M ++G K V + N +K L + L+ L ++
Sbjct: 156 FYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 177 PEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR 236
P + + D +F V++ + E G LD A + +M + G ++ ++ F K+ R
Sbjct: 216 P-SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 237 PEIG-NGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYN 295
E N + + G FP+ TFN + L A ++M +M + G +PD TYN
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 296 LVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKK 355
VI G C+ G + A +V M+ R PN Y T+I LC+E A + + K
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 356 NWVPSVDTISALLEGL 371
+P V T ++L++GL
Sbjct: 395 GILPDVCTFNSLIQGL 410
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 150 VKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVM 209
V + N+ ++ L +R+ + E+ K + D F++N++I + C G LD+A ++
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 210 VEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNK 269
+M+ G VITY TLI F K N+ +++ M G N T+N I L
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 270 RRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIY 329
RR A +LM M G +PD+ TYN ++ FCR G + A + AM P+ Y
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 330 QTMIHYLCQEGDFNLA 345
T+I LC+ G +A
Sbjct: 579 GTLISGLCKAGRVEVA 594
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D++++N VI C++G + +A V+ +M P+ +TY TLIS K+N+ E L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
++ KG P++ TFN IQ L R A +L M+ G EPDE TYN++I C
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQ 338
G LD A + M + Y T+I C+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 7/330 (2%)
Query: 51 LVKLKAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLP 110
L L+++ D +LF + +E+ + RL + FD ++ +LE KS
Sbjct: 54 LDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSR 113
Query: 111 QGRREGFIMRIMMLYGKAGM---IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLK 167
+ ++ Y + + I +D D +G K N L +L + LK
Sbjct: 114 CEMGTSTFLILIESYAQFELQDEILSVVDWMIDE--FGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 168 AIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTL 227
++ ++ + I+ D+ +FN++IKA C L A L++ +M G+ PD T+TT+
Sbjct: 172 LVEISHAKM-SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 228 ISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQA-NKLMGLMQRFG 286
+ + ++ + + MV GC + + NV + + R A N + + + G
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 287 IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY 346
PD+ T+N ++ G C++GH+ A ++ ML P+ Y ++I LC+ G+ A
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 347 IMCKDSMKKNWVPSVDTISALLEGLKKNNQ 376
+ + ++ P+ T + L+ L K NQ
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 5/271 (1%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
K G +K A++ M C + N + L + ++ L V I D+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDV 400
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
+FN +I+ C A + EM+ G +PD TY LI + + + +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M GC ++ T+N I ++ +A ++ M+ G+ + VTYN +I G C+S
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
++ A ++ M+ P++ Y +++ + C+ GD A + + P + T
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 367 LLEGLKKNNQPCKANTIMALVQRR----VPH 393
L+ GL K + A+ ++ +Q + PH
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 134 AMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVI 193
AM+ F +M GC+ + N + L L L ++ E + ++N +I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLI 477
Query: 194 KAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCF 253
FC+ +A + EM+ GV + +TY TLI K R E L + M+ +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 254 PNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKV 313
P+ T+N + H +A ++ M G EPD VTY +I G C++G +++A K+
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 314 YSA--MLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS--ALLE 369
+ M G L P+ Y +I L ++ A + ++ +++N P D +S +
Sbjct: 598 LRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP-DAVSYRIVFR 654
Query: 370 GLKKNNQPCK--ANTIMALVQRR-VPHFSS 396
GL P + + ++ L+++ VP FSS
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 2/246 (0%)
Query: 127 KAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDI 186
+A ++ A+ DM YG K+ ++ E DL ++ E F +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE-FGCSWSN 259
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQ-KLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
S N+++ FC+ G ++ A + EM + G PD T+ TL++ K + + +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
+M+ +G P++ T+N I L +A +++ M P+ VTYN +I C+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
++ A ++ + + ++P+ + ++I LC + +A + ++ K P T +
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 366 ALLEGL 371
L++ L
Sbjct: 440 MLIDSL 445
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 8/264 (3%)
Query: 131 IKHAMDTFYDMHL--YGCKRTVKSLNAALKVLTE-SRDLKAIQAFLMEVPEKFHIQFDIF 187
++ AM F D HL C T K+ N ++ L + KA++ L+ V F + DI
Sbjct: 187 VEDAMKLF-DEHLRFQSCNDT-KTFNILIRGLCGVGKAEKALE--LLGVMSGFGCEPDIV 242
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGV-KPDVITYTTLISAFYKDNRPEIGNGLWNL 246
++N +I+ FC+ L+KA + +++ V PDV+TYT++IS + K + + L +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
M+ G +P TFNV + A ++ G M FG PD VT+ +I G+CR G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 307 LDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISA 366
+ +++ M R + PN Y +I+ LC E A + K+ +P +
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 367 LLEGLKKNNQPCKANTIMALVQRR 390
+++G K + +AN I+ ++++
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKK 446
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 132/312 (42%), Gaps = 36/312 (11%)
Query: 97 DYIEHLLEHQKSLPQGRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAA 156
D ++ EH + + F + I L G G + A++ M +GC+ + + N
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCG-VGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLG 216
++ +S +L +V D+ ++ +I +C+ G + +A ++ +M +LG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 217 VKP-----------------------------------DVITYTTLISAFYKDNRPEIGN 241
+ P DV+T+T+LI + + + G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
LW M +G FPN T+++ I L N+ R +A +L+G + I P YN VI GF
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
C++G ++ A + M ++ P++ + +I C +G A + + P
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 362 DTISALLEGLKK 373
T+S+LL L K
Sbjct: 488 ITVSSLLSCLLK 499
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K +I+ +++N++ ++ C+ G+ D A + M+ GV P+ L+S+F + +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 239 IGNGLW-NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLV 297
L +GC N + LV R A KL RF D T+N++
Sbjct: 156 FATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 298 IKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNW 357
I+G C G + A ++ M G P+ Y T+I C+ + N A M KD +K
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGS 271
Query: 358 V--PSVDTISALLEGLKKNNQPCKANTIM 384
V P V T ++++ G K + +A++++
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLL 300
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 139/370 (37%), Gaps = 80/370 (21%)
Query: 55 KAERDPEKLFQLFKANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKS---LPQ 111
K + +P F+ ++ + + + + + L A D + E KS P
Sbjct: 78 KLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN 137
Query: 112 GRREGFIMRIMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQA 171
R GF++ GK + +++ GC V SL L L D A++
Sbjct: 138 NRLLGFLVSSFAEKGKLHFATALLLQSFEVE--GCCMVVNSLLNTLVKLDRVED--AMKL 193
Query: 172 FLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAF 231
F + +F D +FNI+I+ C +G +KA ++ LGV +S F
Sbjct: 194 FDEHL--RFQSCNDTKTFNILIRGLCGVGKAEKA------LELLGV----------MSGF 235
Query: 232 YKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHL-----VNKRRSW------------- 273
GC P++ T+N IQ +NK
Sbjct: 236 -------------------GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 274 ------------------QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYS 315
+A+ L+ M R GI P VT+N+++ G+ ++G + A+++
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 316 AMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
M+ P+ + ++I C+ G + + + ++ + P+ T S L+ L N
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 376 QPCKANTIMA 385
+ KA ++
Sbjct: 397 RLLKARELLG 406
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 187 FSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNL 246
F +N VI FC+ G +++A +++ EM+K KPD IT+T LI R +++
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 247 MVCKGCFPNLATFNVRIQHLVNKRRSWQANKL 278
MV GC P+ T + + L+ + +A L
Sbjct: 478 MVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D+ + L ++ EK I+ D+ +N +I C+ +D
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM G++PDV TY++LIS R + L + M+ + PN+ TF+ I
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TY+ +I GFC LD AK ++ M+ + P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 325 NRKIYQTMIHYLC-----QEG------------------------------DFNLAYIMC 349
N Y T+I C +EG D + A ++
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 350 KDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIMALVQR 389
K + P++ T + LL+GL KN + KA + +QR
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K + DI + + ++ +C + A ++ +M ++G KPD T+TTLI + N+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
L + MV +GC P+L T+ + L + A L+ M++ IE D V YN +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWV 358
G C+ H+D A +++ M + + P+ Y ++I LC G ++ A + D +++
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 359 PSVDTISALLEGLKKNNQPCKANTI 383
P+V T SAL++ K + +A +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFN 190
+ A++ F +M G + V + ++ + L L ++ E+ I ++ +F+
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 332
Query: 191 IVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCK 250
+I AF + G L +A + EM K + PD+ TY++LI+ F +R + ++ LM+ K
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 251 GCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMA 310
CFPN+ T++ I+ +R + +L M + G+ + VTY +I GF ++ D A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 311 KKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEG 370
+ V+ M+ + PN Y ++ LC+ G A ++ + + P + T + ++EG
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 371 LKKNNQPCKANTI 383
+ CKA +
Sbjct: 513 M------CKAGKV 519
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ +++ +IK FC+ +++ + EM + G+ + +TYTTLI F++ + ++
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G PN+ T+N+ + L + +A + +QR +EPD TYN++I+G C++
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G ++ +++ + + + PN Y TMI C++G A + K + +P+ T
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 577 NTLIRARLRDGDREASAELI 596
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I DIF+++ +I FC LD+A + M P+V+TY+TLI F K R E
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G N T+ I R A + M G+ P+ +TYN+++
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C++G L A V+ + + P+ Y MI +C+ G + + C S+ K
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KGV 534
Query: 358 VPSVDTISALLEGLKKNNQPCKANTIMALVQRRVP 392
P+V + ++ G + +A++++ ++ P
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+ KA ++ M+ F +M G + + ++RD Q ++ +
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHP 466
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
+I ++NI++ C+ G L KA +V +Q+ ++PD+ TY +I K + E G L+
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
+ KG PN+ +N I K +A+ L+ M+ G P+ TYN +I+ R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 305 GHLDMAKKVYSAM 317
G + + ++ M
Sbjct: 587 GDREASAELIKEM 599
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 133 HAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDL-KAIQAFLMEVPEKFHIQFDIFSFNI 191
+A F M G + + N L L ++ L KA+ F E ++ ++ DI+++NI
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--EYLQRSTMEPDIYTYNI 508
Query: 192 VIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKG 251
+I+ C+ G ++ + + + GV P+VI Y T+IS F + E + L M G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 252 CFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLD 308
PN T+N I+ + + +L+ M+ G D T LV G LD
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLD 624
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 38/346 (10%)
Query: 62 KLFQLFK-ANAHNRIVIENKYAFEDTVSRLAGARRFDYIEHLLEHQKSLPQGRREGFIMR 120
K Q F + H+R + + +F+ + A + L+ +SL G
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 121 IMMLYGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKF 180
+ Y AG A+ F +MH +GC + + S N L VL +S+ ++ + +F
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 181 HIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR---- 236
+ D ++N+++ +C + KA V+ EM + G+ P++ TY T++ F++ +
Sbjct: 192 SV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 237 -----------------------------PEI--GNGLWNLMVCKGCFPNLATFNVRIQH 265
EI +++ M+ +G P++AT+N IQ
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 266 LVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
L K A + M R G EP+ TYN++I+G +G +++ M PN
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ Y MI Y + + A + + + +P++DT + L+ G+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
+G AG IK A + F +M G +V + NA ++VL + +++ E+ + + +
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY-EP 333
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
++ ++N++I+ G + +M M+ G +P+ TY +I + + + E GL+
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 393
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQ---ANKLMGLMQRFGIEPDEVTYNLVIKGF 301
M C PNL T+N+ I + ++RS A KL+ M G P + T+N V+ G
Sbjct: 394 EKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGL 453
Query: 302 CRSGHLDMAKKV 313
+G+ AK++
Sbjct: 454 LLTGNQAFAKEI 465
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 38/233 (16%)
Query: 188 SFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM 247
+F IV + + G DKA + + M + G D+ ++ T++ K R E L+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 248 VCKGCFP-NLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGH 306
+G F + T+NV + +R+ +A +++ M GI P+ TYN ++KGF R+G
Sbjct: 188 --RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 307 --------LDM---------------------------AKKVYSAMLGRRLMPNRKIYQT 331
L+M A+ V+ M+ ++P+ Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQPCKANTIM 384
MI LC++ + A +M ++ +++ + P+V T + L+ GL + + +M
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 145 GCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDK 204
GC+ + + + L + D + L+ E I+ D+ FN +I + C+ +D
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTD-LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 205 AYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ 264
A + EM+ G++P+V+TY++LIS R + L + M+ K PNL TFN I
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 265 HLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMP 324
V + + +A KL M + I+PD TYN ++ GFC LD AK+++ M+ + P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 325 NRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGL 371
+ Y T+I C+ + ++ + V T + L++GL
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 179 KFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPE 238
K I DIF++N ++ FC LDKA + M PDV+TY TLI F K R E
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 239 IGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVI 298
G L+ M +G + T+ IQ L + A K+ M G+ PD +TY++++
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 299 KGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAY-IMCKDSMKKNW 357
G C +G L+ A +V+ M + + IY TMI +C+ G + + + C S+ K
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL-KGV 536
Query: 358 VPSVDTISALLEGL 371
P+V T + ++ GL
Sbjct: 537 KPNVVTYNTMISGL 550
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%)
Query: 186 IFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN 245
I + + ++ +C + A ++ +M ++G +PD IT+TTLI + N+ L +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 246 LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSG 305
MV +GC PNL T+ V + L + + A L+ M+ IE D V +N +I C+
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 306 HLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTIS 365
H+D A ++ M + + PN Y ++I LC G ++ A + D ++K P++ T +
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 366 ALLEGLKKNNQPCKANTI 383
AL++ K + +A +
Sbjct: 335 ALIDAFVKEGKFVEAEKL 352
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLW 244
D+ ++N +IK FC+ ++ + EM G+ D +TYTTLI + D + ++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 245 NLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRS 304
MV G P++ T+++ + L N + +A ++ MQ+ I+ D Y +I+G C++
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 305 GHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTI 364
G +D ++ ++ + + PN Y TMI LC + AY + K + +P+ T
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 365 SALLEG-LKKNNQPCKANTI 383
+ L+ L+ ++ A I
Sbjct: 579 NTLIRAHLRDGDKAASAELI 598
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 173 LMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFY 232
L E ++ I ++++NI+I FC + A ++ +M KLG +P ++T ++L++ +
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 233 KDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEV 292
R L + MV G P+ TF I L ++ +A L+ M + G +P+ V
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 293 TYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDS 352
TY +V+ G C+ G D+A + + M ++ + I+ T+I LC+ + A + K+
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 353 MKKNWVPSVDTISALLEGLKKNNQPCKANTIMA-LVQRRV 391
K P+V T S+L+ L + A+ +++ ++++++
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 98/194 (50%)
Query: 183 QFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNG 242
Q ++ ++ +V+ C+ G D A ++ +M+ ++ DV+ + T+I + K +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 243 LWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ M KG PN+ T++ I L + R A++L+ M I P+ VT+N +I F
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
+ G A+K+Y M+ R + P+ Y ++++ C + A M + + K+ P V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 363 TISALLEGLKKNNQ 376
T + L++G K+ +
Sbjct: 402 TYNTLIKGFCKSKR 415
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 167 KAIQAFLMEVPEKFHIQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTT 226
KA++ F + +K I+ DI+ + +I+ C+ G +D + + + GVKP+V+TY T
Sbjct: 488 KALEVF--DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 227 LISAFYKDNRPEIGNGLWNLMVCKGCFPNLATFNVRIQ-HLVNKRRSWQA 275
+IS + L M G PN T+N I+ HL + ++ A
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 202 LDKAYLVMVEMQKLGVKPDVITYTTLISAFYK----DNRPEIGNGLWNLMVCKGCFPNLA 257
LD A + M K P ++ + L+SA K D +G + L + G L
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG----LY 121
Query: 258 TFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAM 317
T+N+ I + + A L+G M + G EP VT + ++ G+C + A + M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 318 LGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNNQP 377
+ P+ + T+IH L + A + +++ P++ T ++ GL K
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK---- 237
Query: 378 CKANTIMAL 386
+ +T +AL
Sbjct: 238 -RGDTDLAL 245
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 242 GLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGF 301
GL+ MV P++ FN + + ++ L MQR I TYN++I F
Sbjct: 71 GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 302 CRSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSV 361
CR + +A + M+ P+ ++++ C + A + ++ + P
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 362 DTISALLEGLKKNNQPCKANTIMALVQRRVPHFSSNQLSAFKSILS 407
T + L+ GL +N KA+ +ALV R V L + +++
Sbjct: 191 ITFTTLIHGLFLHN---KASEAVALVDRMVQRGCQPNLVTYGVVVN 233
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFHIQF 184
YG AG+ + ++ F M G +V + N+ L +L + E+ + +
Sbjct: 148 YGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTP 207
Query: 185 DIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGL- 243
D ++FN +I FC+ ++D+A+ + +M+ PDV+TY T+I + + +I + +
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 244 ------------------------------------WNLMVCKGCFPNLATFNVRIQHLV 267
++ M+ +G PN T+N I+ L
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327
Query: 268 NKRRSWQ-ANKLMGLMQRFG-IEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGRRLMPN 325
R + + L+G F PD T+N++IK C +GHLD A KV+ ML +L P+
Sbjct: 328 EAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 326 RKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISAL 367
Y +I LC +F+ A + + +K + D L
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 157 LKVLTESRDLKAIQAFLMEVPEKFH--IQFDIFSFNIVIKAFCEMGILDKAYLVMVEMQK 214
L+ L +R+L + FL + + + ++ FN +I+++ G+ ++ + M++
Sbjct: 107 LEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQ 166
Query: 215 LGVKPDVITYTTLISAFYKDNRPEIGNGLWNLM-VCKGCFPNLATFNVRIQHLVNKRRSW 273
+G+ P V+T+ +L+S K R + + L++ M G P+ TFN I
Sbjct: 167 MGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVD 226
Query: 274 QANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAMLGR--RLMPNRKIYQT 331
+A ++ M+ + PD VTYN +I G CR+G + +A V S ML + + PN Y T
Sbjct: 227 EAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTT 286
Query: 332 MIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
++ C + + + A ++ D + + P+ T + L++GL +
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE 328
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 131 IKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEKFH-IQFDIFSF 189
I A+ F+DM G K + N +K L+E+ I+ L+ + F D +F
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 190 NIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNRPEIGNGLWN---- 245
NI+IKA C+ G LD A V EM + + PD +Y+ LI N + L+N
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 246 ---LMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFC 302
L+ C P A +N ++L ++ QA K+ + + G++ D +Y +I G C
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHC 475
Query: 303 RSGHLDMAKKVYSAMLGRRLMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVD 362
R G A ++ ML R +P+ + Y+ +I L + G+ LA+ + ++ +++P
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 363 TISALLEGLKK 373
T ++L L K
Sbjct: 536 TFHSVLAELAK 546
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 54/298 (18%)
Query: 125 YGKAGMIKHAMDTFYDMHLYGCKRTVKSLNAALKVLTESRDLKAIQAFLMEVPEK-FHIQ 183
+ K M+ A F DM LY C V + N + L + +K L + +K +
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 184 FDIFSFNIVIKAFCEMGILDKAYLVMVEMQKLGVKPDVITYTTLISAFYKDNR-PEI--- 239
++ S+ +++ +C +D+A LV +M G+KP+ +TY TLI + +R EI
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 240 ---GNGLWNLMVCKGCFPNLATFNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNL 296
GN + P+ TFN+ I+ + A K+ M + PD +Y++
Sbjct: 339 LIGGNDAFTTFA-----PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Query: 297 VIKGFCRSGHLDMAKKVYSAMLGRRLM-------PNRKIYQTMIHYLC------------ 337
+I+ C D A+ +++ + + ++ P Y M YLC
Sbjct: 394 LIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 453
Query: 338 ----------------------QEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKK 373
+EG F AY + +++ +VP ++T L++GL K
Sbjct: 454 RQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 259 FNVRIQHLVNKRRSWQANKLMGLMQRFGIEPDEVTYNLVIKGFCRSGHLDMAKKVYSAML 318
FN I+ N ++ KL M++ GI P +T+N ++ + G MA ++ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM- 199
Query: 319 GRR---LMPNRKIYQTMIHYLCQEGDFNLAYIMCKDSMKKNWVPSVDTISALLEGLKKNN 375
RR + P+ + T+I+ C+ + A+ + KD + P V T + +++GL +
Sbjct: 200 -RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 376 QPCKANTIMALVQRRVPHFSSNQLS 400
+ A+ +++ + ++ N +S
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVS 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,703,772
Number of Sequences: 539616
Number of extensions: 5756579
Number of successful extensions: 21933
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 17123
Number of HSP's gapped (non-prelim): 2599
length of query: 409
length of database: 191,569,459
effective HSP length: 120
effective length of query: 289
effective length of database: 126,815,539
effective search space: 36649690771
effective search space used: 36649690771
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)